Query 029526
Match_columns 192
No_of_seqs 152 out of 1087
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 23:41:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029526.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029526hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q94_A Fructose-bisphosphate a 100.0 2.4E-74 8.2E-79 501.2 24.3 186 1-192 97-288 (288)
2 1gvf_A Tagatose-bisphosphate a 100.0 4.1E-74 1.4E-78 499.5 23.6 188 1-192 91-284 (286)
3 3n9r_A Fructose-bisphosphate a 100.0 6.8E-73 2.3E-77 495.4 23.6 189 1-192 91-307 (307)
4 1rvg_A Fructose-1,6-bisphospha 100.0 1.7E-72 5.8E-77 492.5 23.8 189 1-192 89-305 (305)
5 2isw_A Putative fructose-1,6-b 100.0 4.9E-71 1.7E-75 486.3 22.5 186 1-192 92-307 (323)
6 3pm6_A Putative fructose-bisph 100.0 1.1E-70 3.8E-75 480.7 22.1 190 1-192 99-299 (306)
7 3elf_A Fructose-bisphosphate a 100.0 1.6E-69 5.4E-74 481.1 20.9 191 2-192 119-341 (349)
8 3qm3_A Fructose-bisphosphate a 100.0 9.9E-69 3.4E-73 477.4 19.5 190 2-191 130-356 (357)
9 1dos_A Aldolase class II; lyas 100.0 1.8E-67 6.2E-72 469.4 22.5 188 4-191 134-357 (358)
10 2fiq_A Putative tagatose 6-pho 100.0 5.6E-50 1.9E-54 362.9 6.4 182 2-189 112-333 (420)
11 3txv_A Probable tagatose 6-pho 100.0 3E-38 1E-42 287.3 6.7 154 1-158 118-301 (450)
12 2ftp_A Hydroxymethylglutaryl-C 99.9 2E-21 6.8E-26 168.5 13.0 129 2-145 91-234 (302)
13 1ydn_A Hydroxymethylglutaryl-C 99.9 4.3E-21 1.5E-25 165.4 13.1 130 2-146 87-231 (295)
14 2qjg_A Putative aldolase MJ040 99.5 3E-12 1E-16 108.0 17.0 127 2-150 107-241 (273)
15 2cw6_A Hydroxymethylglutaryl-C 98.7 7.7E-07 2.6E-11 76.5 16.7 128 2-144 88-230 (298)
16 1ydo_A HMG-COA lyase; TIM-barr 98.6 2.7E-07 9.3E-12 80.1 11.3 153 2-169 89-275 (307)
17 1z41_A YQJM, probable NADH-dep 97.8 0.00048 1.7E-08 59.9 14.7 134 2-150 152-311 (338)
18 3gr7_A NADPH dehydrogenase; fl 97.7 0.0018 6.3E-08 56.5 16.1 137 2-150 152-311 (340)
19 3glc_A Aldolase LSRF; TIM barr 97.6 0.0055 1.9E-07 52.9 17.3 147 2-186 133-290 (295)
20 3q58_A N-acetylmannosamine-6-p 97.5 0.0021 7.3E-08 53.2 13.8 119 2-151 96-215 (229)
21 3igs_A N-acetylmannosamine-6-p 97.5 0.0024 8.2E-08 53.0 13.9 118 2-151 96-215 (232)
22 3hgj_A Chromate reductase; TIM 97.5 0.002 7E-08 56.3 13.9 135 2-150 160-322 (349)
23 1to3_A Putative aldolase YIHT; 97.3 0.019 6.5E-07 49.5 17.1 136 2-152 116-260 (304)
24 3f4w_A Putative hexulose 6 pho 97.2 0.0093 3.2E-07 47.5 13.7 119 2-150 72-191 (211)
25 3l5l_A Xenobiotic reductase A; 97.1 0.0096 3.3E-07 52.3 13.7 136 2-150 166-329 (363)
26 3qja_A IGPS, indole-3-glycerol 97.1 0.0091 3.1E-07 50.7 13.0 116 2-150 130-246 (272)
27 2z6i_A Trans-2-enoyl-ACP reduc 97.1 0.0066 2.2E-07 52.4 12.1 113 3-151 84-196 (332)
28 2r14_A Morphinone reductase; H 96.9 0.01 3.6E-07 52.5 12.1 133 2-150 174-332 (377)
29 2gou_A Oxidoreductase, FMN-bin 96.9 0.017 5.9E-07 50.8 13.2 132 2-150 169-326 (365)
30 1y0e_A Putative N-acetylmannos 96.9 0.01 3.5E-07 47.6 10.7 119 2-151 83-209 (223)
31 2nx9_A Oxaloacetate decarboxyl 96.9 0.014 4.6E-07 53.4 12.7 117 2-144 108-231 (464)
32 1eep_A Inosine 5'-monophosphat 96.8 0.063 2.2E-06 47.4 16.7 122 2-150 160-289 (404)
33 3ble_A Citramalate synthase fr 96.8 0.007 2.4E-07 52.8 9.9 150 2-169 104-282 (337)
34 1thf_D HISF protein; thermophI 96.8 0.0034 1.2E-07 51.4 7.4 79 65-151 30-108 (253)
35 3o63_A Probable thiamine-phosp 96.8 0.13 4.4E-06 42.9 17.0 142 2-150 51-223 (243)
36 1vzw_A Phosphoribosyl isomeras 96.7 0.0034 1.1E-07 51.3 6.8 80 63-151 30-109 (244)
37 2gjl_A Hypothetical protein PA 96.7 0.049 1.7E-06 46.6 14.4 81 65-151 126-206 (328)
38 2y88_A Phosphoribosyl isomeras 96.7 0.0029 9.9E-08 51.5 6.1 79 64-151 30-108 (244)
39 3tsm_A IGPS, indole-3-glycerol 96.7 0.046 1.6E-06 46.6 13.8 116 2-150 137-253 (272)
40 1vyr_A Pentaerythritol tetrani 96.7 0.037 1.3E-06 48.6 13.6 133 2-150 169-327 (364)
41 3kru_A NADH:flavin oxidoreduct 96.6 0.061 2.1E-06 47.0 14.9 134 2-150 151-311 (343)
42 3dxi_A Putative aldolase; TIM 96.6 0.042 1.4E-06 47.7 13.6 139 3-165 96-249 (320)
43 3aty_A Tcoye, prostaglandin F2 96.6 0.028 9.5E-07 49.8 12.5 130 2-150 182-340 (379)
44 3b0p_A TRNA-dihydrouridine syn 96.6 0.027 9.3E-07 49.1 12.3 136 2-150 78-229 (350)
45 3bw2_A 2-nitropropane dioxygen 96.6 0.073 2.5E-06 46.4 15.0 80 65-150 153-241 (369)
46 1ps9_A 2,4-dienoyl-COA reducta 96.6 0.051 1.7E-06 50.7 14.7 135 2-150 149-314 (671)
47 3bo9_A Putative nitroalkan dio 96.4 0.07 2.4E-06 46.0 13.6 79 64-150 131-209 (326)
48 1ypf_A GMP reductase; GUAC, pu 96.4 0.21 7.3E-06 43.1 16.7 78 64-150 157-243 (336)
49 1yxy_A Putative N-acetylmannos 96.4 0.08 2.7E-06 42.8 12.9 121 2-151 96-220 (234)
50 2hsa_B 12-oxophytodienoate red 96.3 0.05 1.7E-06 48.5 12.6 134 2-149 179-351 (402)
51 3gka_A N-ethylmaleimide reduct 96.3 0.035 1.2E-06 49.0 11.3 126 2-150 169-320 (361)
52 4ab4_A Xenobiotic reductase B; 96.3 0.044 1.5E-06 48.3 12.0 126 2-150 161-312 (362)
53 3sgz_A Hydroxyacid oxidase 2; 96.3 0.088 3E-06 46.4 13.8 112 65-189 226-337 (352)
54 1rqb_A Transcarboxylase 5S sub 96.3 0.048 1.7E-06 50.7 12.7 119 2-144 125-250 (539)
55 2tps_A Protein (thiamin phosph 96.2 0.081 2.8E-06 42.2 12.2 137 2-150 39-204 (227)
56 1i4n_A Indole-3-glycerol phosp 96.2 0.054 1.9E-06 45.6 11.2 116 2-151 118-235 (251)
57 3ewb_X 2-isopropylmalate synth 96.1 0.039 1.3E-06 47.2 10.3 120 18-156 114-251 (293)
58 1nvm_A HOA, 4-hydroxy-2-oxoval 96.1 0.12 4E-06 45.0 13.3 132 2-157 101-249 (345)
59 1icp_A OPR1, 12-oxophytodienoa 96.1 0.047 1.6E-06 48.2 11.0 134 2-150 175-334 (376)
60 1vrd_A Inosine-5'-monophosphat 96.1 0.044 1.5E-06 49.6 10.9 125 2-150 244-373 (494)
61 3nav_A Tryptophan synthase alp 96.1 0.093 3.2E-06 44.6 12.3 124 2-155 120-246 (271)
62 3vnd_A TSA, tryptophan synthas 96.1 0.12 4.2E-06 43.7 13.0 124 2-155 118-244 (267)
63 4fo4_A Inosine 5'-monophosphat 96.0 0.05 1.7E-06 48.1 10.9 126 2-150 115-244 (366)
64 3tdn_A FLR symmetric alpha-bet 96.0 0.037 1.3E-06 45.3 9.4 77 66-150 36-112 (247)
65 1xi3_A Thiamine phosphate pyro 96.0 0.42 1.4E-05 37.5 17.1 141 2-150 34-194 (215)
66 1vzw_A Phosphoribosyl isomeras 95.9 0.043 1.5E-06 44.6 9.4 131 2-150 92-226 (244)
67 2nli_A Lactate oxidase; flavoe 95.9 0.19 6.4E-06 44.2 14.1 112 65-189 238-349 (368)
68 2nzl_A Hydroxyacid oxidase 1; 95.9 0.16 5.5E-06 45.1 13.7 112 65-189 261-372 (392)
69 3ffs_A Inosine-5-monophosphate 95.9 0.094 3.2E-06 47.0 12.1 125 2-150 151-279 (400)
70 2ztj_A Homocitrate synthase; ( 95.9 0.087 3E-06 46.6 11.8 122 2-144 82-219 (382)
71 3eeg_A 2-isopropylmalate synth 95.8 0.019 6.4E-07 49.9 6.8 136 2-156 85-252 (325)
72 3rmj_A 2-isopropylmalate synth 95.8 0.056 1.9E-06 47.8 9.9 131 6-155 99-257 (370)
73 1geq_A Tryptophan synthase alp 95.7 0.47 1.6E-05 38.4 14.9 121 2-153 103-227 (248)
74 1rd5_A Tryptophan synthase alp 95.7 0.21 7E-06 41.3 12.7 120 3-153 114-237 (262)
75 4fxs_A Inosine-5'-monophosphat 95.7 0.13 4.5E-06 47.0 12.3 127 2-150 238-367 (496)
76 1gox_A (S)-2-hydroxy-acid oxid 95.6 0.27 9.4E-06 43.0 13.9 112 65-189 234-345 (370)
77 1ep3_A Dihydroorotate dehydrog 95.6 0.46 1.6E-05 39.7 14.8 125 6-151 124-275 (311)
78 1yad_A Regulatory protein TENI 95.6 0.31 1E-05 39.0 13.2 141 2-150 37-196 (221)
79 1w8s_A FBP aldolase, fructose- 95.6 0.54 1.8E-05 39.3 15.1 123 2-149 100-234 (263)
80 1p4c_A L(+)-mandelate dehydrog 95.6 0.21 7.3E-06 44.0 13.1 110 65-189 234-343 (380)
81 1h5y_A HISF; histidine biosynt 95.6 0.029 9.9E-07 45.0 6.9 78 65-150 33-110 (253)
82 3ivs_A Homocitrate synthase, m 95.6 0.1 3.6E-06 47.1 11.2 122 2-145 118-254 (423)
83 1wv2_A Thiazole moeity, thiazo 95.5 0.15 5.2E-06 43.4 11.3 75 64-150 143-220 (265)
84 2w6r_A Imidazole glycerol phos 95.5 0.043 1.5E-06 45.1 7.8 136 2-151 91-234 (266)
85 1jcn_A Inosine monophosphate d 95.4 0.16 5.4E-06 46.2 12.0 122 2-150 262-391 (514)
86 3khj_A Inosine-5-monophosphate 95.4 0.11 3.8E-06 45.6 10.5 126 2-150 112-240 (361)
87 4avf_A Inosine-5'-monophosphat 95.4 0.087 3E-06 48.0 10.0 126 2-150 236-365 (490)
88 1kbi_A Cytochrome B2, L-LCR; f 95.3 0.29 9.8E-06 45.0 13.4 113 65-189 352-468 (511)
89 3r2g_A Inosine 5'-monophosphat 95.3 0.14 4.6E-06 45.4 10.8 116 2-150 107-232 (361)
90 1ka9_F Imidazole glycerol phos 95.2 0.086 2.9E-06 42.8 8.7 78 65-150 152-229 (252)
91 1qop_A Tryptophan synthase alp 95.2 0.67 2.3E-05 38.6 14.4 123 2-154 117-242 (268)
92 1o94_A Tmadh, trimethylamine d 95.2 0.39 1.3E-05 45.4 14.3 135 2-149 157-324 (729)
93 3bg3_A Pyruvate carboxylase, m 95.2 0.26 9.1E-06 47.2 13.1 151 2-169 205-373 (718)
94 1vc4_A Indole-3-glycerol phosp 95.1 0.064 2.2E-06 44.9 7.6 115 2-150 123-240 (254)
95 1p0k_A Isopentenyl-diphosphate 94.9 0.13 4.4E-06 44.4 9.3 79 65-146 127-209 (349)
96 3ajx_A 3-hexulose-6-phosphate 94.9 0.29 9.9E-06 38.5 10.6 119 2-150 72-190 (207)
97 2v82_A 2-dehydro-3-deoxy-6-pho 94.8 0.31 1.1E-05 38.6 10.8 106 2-150 75-180 (212)
98 2ekc_A AQ_1548, tryptophan syn 94.8 0.59 2E-05 38.9 12.9 121 2-153 117-241 (262)
99 1ka9_F Imidazole glycerol phos 94.8 0.072 2.4E-06 43.3 7.1 79 65-151 31-109 (252)
100 2w6r_A Imidazole glycerol phos 94.8 0.14 4.7E-06 42.0 8.7 78 65-150 30-107 (266)
101 3l5a_A NADH/flavin oxidoreduct 94.7 0.25 8.6E-06 44.3 11.0 138 1-150 177-350 (419)
102 1thf_D HISF protein; thermophI 94.7 0.14 4.7E-06 41.6 8.5 77 66-150 152-228 (253)
103 2y88_A Phosphoribosyl isomeras 94.7 0.13 4.4E-06 41.6 8.2 77 66-150 150-229 (244)
104 3nl6_A Thiamine biosynthetic b 94.6 0.44 1.5E-05 44.1 12.7 143 2-150 33-213 (540)
105 3usb_A Inosine-5'-monophosphat 94.6 0.37 1.3E-05 44.1 12.0 125 2-149 263-391 (511)
106 1vcf_A Isopentenyl-diphosphate 94.6 0.6 2.1E-05 40.0 12.7 110 65-189 193-320 (332)
107 1xm3_A Thiazole biosynthesis p 94.5 0.54 1.8E-05 39.2 11.9 75 66-150 136-211 (264)
108 4a3u_A NCR, NADH\:flavin oxido 94.5 0.36 1.2E-05 42.1 11.1 134 1-149 159-318 (358)
109 1p0k_A Isopentenyl-diphosphate 94.4 0.81 2.8E-05 39.3 13.2 111 65-189 190-316 (349)
110 2ovl_A Putative racemase; stru 94.4 0.64 2.2E-05 40.3 12.5 112 2-146 156-272 (371)
111 2c6q_A GMP reductase 2; TIM ba 94.1 0.16 5.5E-06 44.4 8.1 82 65-150 170-256 (351)
112 1nu5_A Chloromuconate cycloiso 94.1 1.6 5.4E-05 37.6 14.4 114 2-148 152-271 (370)
113 1pii_A N-(5'phosphoribosyl)ant 94.1 0.81 2.8E-05 41.6 12.9 117 2-151 125-241 (452)
114 1rvk_A Isomerase/lactonizing e 94.1 1.4 4.8E-05 38.1 14.1 116 2-149 159-285 (382)
115 1tzz_A Hypothetical protein L1 94.1 0.94 3.2E-05 39.5 13.1 114 2-147 175-296 (392)
116 1mdl_A Mandelate racemase; iso 94.0 0.6 2.1E-05 40.1 11.5 114 2-147 154-271 (359)
117 3vkj_A Isopentenyl-diphosphate 94.0 0.16 5.3E-06 44.9 7.8 78 65-145 135-217 (368)
118 2qr6_A IMP dehydrogenase/GMP r 93.9 0.36 1.2E-05 42.3 10.0 85 64-151 219-311 (393)
119 2og9_A Mandelate racemase/muco 93.8 1.3 4.5E-05 38.7 13.4 114 2-148 172-290 (393)
120 1h5y_A HISF; histidine biosynt 93.8 0.32 1.1E-05 38.8 8.7 78 65-150 154-231 (253)
121 2qf7_A Pyruvate carboxylase pr 93.7 0.31 1.1E-05 49.0 10.3 126 2-145 653-783 (1165)
122 1qo2_A Molecule: N-((5-phospho 93.6 0.21 7.3E-06 40.4 7.5 128 2-150 90-227 (241)
123 1qo2_A Molecule: N-((5-phospho 93.5 0.15 5.3E-06 41.3 6.4 78 65-151 30-107 (241)
124 1zfj_A Inosine monophosphate d 93.4 0.38 1.3E-05 43.2 9.5 125 2-150 240-369 (491)
125 1vhn_A Putative flavin oxidore 92.9 1.3 4.4E-05 37.6 11.7 125 2-149 79-216 (318)
126 2r8c_A Putative amidohydrolase 92.8 2.1 7.2E-05 36.6 13.0 81 64-147 171-256 (426)
127 3jr2_A Hexulose-6-phosphate sy 92.8 0.59 2E-05 37.5 8.8 123 2-152 78-200 (218)
128 1mzh_A Deoxyribose-phosphate a 92.8 1.6 5.5E-05 35.4 11.6 121 2-147 78-205 (225)
129 3iwp_A Copper homeostasis prot 92.8 0.64 2.2E-05 39.9 9.4 74 63-146 164-238 (287)
130 3fok_A Uncharacterized protein 92.7 1.6 5.6E-05 37.8 12.0 137 2-172 136-292 (307)
131 2gdq_A YITF; mandelate racemas 92.7 1.4 4.7E-05 38.4 11.8 114 2-147 149-267 (382)
132 2agk_A 1-(5-phosphoribosyl)-5- 92.7 0.27 9.2E-06 41.1 6.8 132 2-149 92-239 (260)
133 2qq6_A Mandelate racemase/muco 92.6 2.9 0.0001 36.6 13.8 117 2-149 159-294 (410)
134 2pgw_A Muconate cycloisomerase 92.6 1.7 5.9E-05 37.7 12.2 113 2-148 157-273 (384)
135 3k30_A Histamine dehydrogenase 92.5 1 3.5E-05 42.1 11.3 134 2-150 164-328 (690)
136 3vkj_A Isopentenyl-diphosphate 92.4 2.2 7.4E-05 37.5 12.7 107 66-189 200-331 (368)
137 2zbt_A Pyridoxal biosynthesis 92.4 0.15 5.3E-06 42.8 5.1 82 64-150 132-242 (297)
138 2pp0_A L-talarate/galactarate 92.4 3 0.0001 36.4 13.6 114 2-148 185-303 (398)
139 3txv_A Probable tagatose 6-pho 92.3 0.12 4.2E-06 47.0 4.6 79 68-149 35-134 (450)
140 4a29_A Engineered retro-aldol 92.3 2.8 9.4E-05 35.5 12.6 117 2-151 121-238 (258)
141 2qgy_A Enolase from the enviro 92.2 2.6 8.9E-05 36.7 12.9 112 2-146 159-275 (391)
142 2fli_A Ribulose-phosphate 3-ep 92.1 0.24 8.1E-06 39.3 5.6 78 64-147 15-92 (220)
143 1h1y_A D-ribulose-5-phosphate 92.0 0.16 5.4E-06 41.2 4.6 65 78-150 138-205 (228)
144 1wa3_A 2-keto-3-deoxy-6-phosph 92.0 2.5 8.7E-05 32.9 11.6 47 101-151 137-183 (205)
145 3sr7_A Isopentenyl-diphosphate 92.0 0.36 1.2E-05 42.6 7.2 77 65-145 155-236 (365)
146 2qdd_A Mandelate racemase/muco 91.7 2.2 7.4E-05 36.9 11.7 112 2-148 155-269 (378)
147 2ox4_A Putative mandelate race 91.6 3 0.0001 36.3 12.7 117 2-149 156-293 (403)
148 2oz8_A MLL7089 protein; struct 91.6 2.1 7.3E-05 37.3 11.6 113 2-146 155-273 (389)
149 2fiq_A Putative tagatose 6-pho 91.5 0.14 4.9E-06 46.2 4.0 82 65-149 22-127 (420)
150 3sr7_A Isopentenyl-diphosphate 91.5 2.8 9.6E-05 36.8 12.3 111 65-189 218-343 (365)
151 3gd6_A Muconate cycloisomerase 91.3 3.7 0.00013 35.9 12.9 112 2-149 152-271 (391)
152 1tkk_A Similar to chloromucona 91.3 4.4 0.00015 34.7 13.3 116 2-149 150-271 (366)
153 2p8b_A Mandelate racemase/muco 91.2 2.7 9.3E-05 36.1 11.8 114 2-148 151-269 (369)
154 1gte_A Dihydropyrimidine dehyd 91.2 1.4 4.8E-05 43.3 11.1 129 3-151 657-821 (1025)
155 1r3s_A URO-D, uroporphyrinogen 91.2 0.21 7.1E-06 43.4 4.6 119 62-188 180-330 (367)
156 2qde_A Mandelate racemase/muco 91.2 4.7 0.00016 35.1 13.4 114 2-148 155-272 (397)
157 2gl5_A Putative dehydratase pr 91.1 2.3 7.9E-05 37.2 11.4 67 66-147 230-300 (410)
158 1vhc_A Putative KHG/KDPG aldol 91.1 4.9 0.00017 32.7 12.6 105 2-150 84-189 (224)
159 2nql_A AGR_PAT_674P, isomerase 91.1 1.7 5.8E-05 37.8 10.4 115 2-149 174-292 (388)
160 2eja_A URO-D, UPD, uroporphyri 91.0 0.19 6.4E-06 43.0 4.2 119 62-188 162-304 (338)
161 2ps2_A Putative mandelate race 91.0 1.7 5.7E-05 37.5 10.3 111 2-148 156-271 (371)
162 4gj1_A 1-(5-phosphoribosyl)-5- 90.9 0.69 2.4E-05 38.1 7.4 76 65-149 31-107 (243)
163 1jvn_A Glutamine, bifunctional 90.9 0.77 2.6E-05 42.4 8.4 73 67-149 455-529 (555)
164 3ceu_A Thiamine phosphate pyro 90.9 0.61 2.1E-05 37.2 6.9 138 2-150 21-176 (210)
165 3ik4_A Mandelate racemase/muco 90.9 4.8 0.00017 34.8 13.2 121 2-156 153-279 (365)
166 3stp_A Galactonate dehydratase 90.9 6.5 0.00022 34.7 14.2 123 2-156 189-321 (412)
167 2o56_A Putative mandelate race 90.9 2.9 9.9E-05 36.5 11.8 115 2-147 162-297 (407)
168 1jub_A Dihydroorotate dehydrog 90.8 6.4 0.00022 32.8 14.9 82 66-151 170-276 (311)
169 1me8_A Inosine-5'-monophosphat 90.8 3.7 0.00012 37.2 12.7 85 64-150 292-385 (503)
170 2rdx_A Mandelate racemase/muco 90.8 1.6 5.5E-05 37.8 10.0 109 2-146 155-267 (379)
171 2htm_A Thiazole biosynthesis p 90.4 3.6 0.00012 35.0 11.4 74 65-150 133-211 (268)
172 2nv1_A Pyridoxal biosynthesis 90.4 0.66 2.3E-05 39.2 7.0 81 65-150 133-242 (305)
173 2zad_A Muconate cycloisomerase 90.3 7.6 0.00026 32.9 16.8 120 2-156 149-274 (345)
174 3inp_A D-ribulose-phosphate 3- 90.2 2.5 8.6E-05 35.2 10.3 121 2-150 104-227 (246)
175 2hzg_A Mandelate racemase/muco 90.2 3.7 0.00012 35.8 11.8 115 2-147 155-278 (401)
176 3bjs_A Mandelate racemase/muco 90.1 4.4 0.00015 35.9 12.4 112 2-146 195-311 (428)
177 4dwd_A Mandelate racemase/muco 90.1 7.2 0.00025 34.1 13.7 114 2-148 150-273 (393)
178 3mkc_A Racemase; metabolic pro 90.0 5.3 0.00018 34.9 12.8 115 2-147 167-288 (394)
179 1tqj_A Ribulose-phosphate 3-ep 89.8 0.18 6.2E-06 41.2 2.9 82 65-151 122-206 (230)
180 2qr6_A IMP dehydrogenase/GMP r 89.6 3.8 0.00013 35.7 11.5 71 68-147 169-240 (393)
181 1tqx_A D-ribulose-5-phosphate 89.6 7.4 0.00025 31.7 13.6 80 65-150 125-205 (227)
182 2qiw_A PEP phosphonomutase; st 89.5 4.8 0.00017 33.6 11.5 126 2-148 101-238 (255)
183 2h6r_A Triosephosphate isomera 89.1 6.7 0.00023 31.5 11.8 119 2-150 77-203 (219)
184 2p10_A MLL9387 protein; putati 89.1 9.4 0.00032 32.7 13.1 126 4-150 118-263 (286)
185 3cyv_A URO-D, UPD, uroporphyri 89.0 0.7 2.4E-05 39.6 6.1 119 62-188 170-317 (354)
186 3p3b_A Mandelate racemase/muco 88.9 1.6 5.5E-05 38.1 8.5 111 2-147 158-286 (392)
187 1wbh_A KHG/KDPG aldolase; lyas 88.8 2 7E-05 34.7 8.5 105 2-150 83-188 (214)
188 3ctl_A D-allulose-6-phosphate 88.8 1.9 6.6E-05 35.3 8.4 122 2-150 75-200 (231)
189 3dg3_A Muconate cycloisomerase 88.7 11 0.00037 32.4 13.6 123 2-157 149-276 (367)
190 3aam_A Endonuclease IV, endoiv 88.6 2.4 8.2E-05 34.0 8.9 56 66-124 15-71 (270)
191 4h2h_A Mandelate racemase/muco 88.5 7.4 0.00025 33.6 12.5 115 2-147 160-275 (376)
192 2f6u_A GGGPS, (S)-3-O-geranylg 88.5 1.2 4E-05 37.0 6.9 78 65-158 146-230 (234)
193 3i6e_A Muconate cycloisomerase 88.4 12 0.0004 32.5 13.8 115 2-149 158-276 (385)
194 3ddm_A Putative mandelate race 88.4 9 0.00031 33.5 13.1 112 2-147 165-282 (392)
195 4adt_A Pyridoxine biosynthetic 88.2 5.2 0.00018 34.2 11.1 79 64-150 132-242 (297)
196 3rcy_A Mandelate racemase/muco 88.1 14 0.00047 32.9 14.8 117 2-149 156-287 (433)
197 3mqt_A Mandelate racemase/muco 88.0 7 0.00024 34.1 12.1 114 2-146 162-282 (394)
198 3ovp_A Ribulose-phosphate 3-ep 88.0 1.1 3.7E-05 36.7 6.4 82 62-148 14-96 (228)
199 1twd_A Copper homeostasis prot 87.9 1.7 5.8E-05 36.7 7.6 72 64-146 127-198 (256)
200 3u9i_A Mandelate racemase/muco 87.8 9.3 0.00032 33.4 12.8 122 2-157 175-310 (393)
201 3sjn_A Mandelate racemase/muco 87.8 10 0.00035 32.7 12.9 115 2-147 156-276 (374)
202 2agk_A 1-(5-phosphoribosyl)-5- 87.7 0.72 2.5E-05 38.5 5.2 69 65-150 38-107 (260)
203 2ze3_A DFA0005; organic waste 87.7 12 0.0004 31.6 13.6 66 76-158 179-244 (275)
204 2poz_A Putative dehydratase; o 87.4 4.8 0.00016 34.9 10.6 114 2-146 147-280 (392)
205 2inf_A URO-D, UPD, uroporphyri 87.4 0.89 3E-05 39.1 5.8 118 63-188 177-317 (359)
206 3inp_A D-ribulose-phosphate 3- 87.3 2.7 9.2E-05 35.0 8.5 83 61-148 36-118 (246)
207 1nvm_A HOA, 4-hydroxy-2-oxoval 87.2 1.4 4.8E-05 38.1 6.9 81 65-149 27-116 (345)
208 4e38_A Keto-hydroxyglutarate-a 87.1 2 7E-05 35.5 7.6 106 2-150 101-206 (232)
209 3i4k_A Muconate lactonizing en 87.0 13 0.00044 32.2 13.1 113 3-147 159-276 (383)
210 3tdn_A FLR symmetric alpha-bet 86.9 0.12 4.2E-06 42.1 0.0 76 67-150 158-233 (247)
211 4dye_A Isomerase; enolase fami 86.9 15 0.0005 32.3 13.5 111 3-149 179-294 (398)
212 3iv3_A Tagatose 1,6-diphosphat 86.7 11 0.00036 32.9 12.3 141 2-150 118-284 (332)
213 1chr_A Chloromuconate cycloiso 86.5 9.8 0.00034 32.7 12.0 108 6-146 157-269 (370)
214 2yw3_A 4-hydroxy-2-oxoglutarat 86.5 2.9 9.9E-05 33.5 8.1 72 65-151 112-184 (207)
215 1zlp_A PSR132, petal death pro 86.3 15 0.00053 31.6 13.3 65 76-158 200-269 (318)
216 4e8g_A Enolase, mandelate race 86.3 16 0.00056 31.8 14.9 114 2-149 174-291 (391)
217 3s5s_A Mandelate racemase/muco 86.3 8 0.00027 33.8 11.4 122 2-157 154-281 (389)
218 1rpx_A Protein (ribulose-phosp 86.2 2.2 7.7E-05 34.0 7.3 119 2-150 86-211 (230)
219 3toy_A Mandelate racemase/muco 86.2 15 0.00052 31.9 13.2 114 2-147 177-295 (383)
220 3ovp_A Ribulose-phosphate 3-ep 86.1 4.3 0.00015 33.0 9.0 119 2-150 82-201 (228)
221 2hxt_A L-fuconate dehydratase; 86.0 12 0.00043 32.9 12.7 113 2-146 208-324 (441)
222 1ydn_A Hydroxymethylglutaryl-C 85.9 2.4 8.3E-05 35.5 7.6 76 65-148 23-101 (295)
223 3hbl_A Pyruvate carboxylase; T 85.8 6.4 0.00022 39.5 11.6 126 2-145 635-766 (1150)
224 3ugv_A Enolase; enzyme functio 85.7 17 0.00059 31.6 15.0 123 2-156 181-310 (390)
225 3cwo_X Beta/alpha-barrel prote 85.5 4.4 0.00015 31.1 8.5 77 65-150 130-207 (237)
226 3nqb_A Adenine deaminase 2; PS 85.4 2.7 9.2E-05 39.0 8.3 132 2-145 111-243 (608)
227 3gl9_A Response regulator; bet 85.3 5.9 0.0002 27.3 8.4 69 64-142 32-101 (122)
228 2qw5_A Xylose isomerase-like T 85.2 9.9 0.00034 31.5 11.1 147 2-150 39-220 (335)
229 1viz_A PCRB protein homolog; s 85.1 2.4 8.1E-05 35.2 7.0 71 65-151 139-215 (240)
230 1oy0_A Ketopantoate hydroxymet 85.1 4.3 0.00015 34.6 8.7 65 5-85 52-133 (281)
231 1f76_A Dihydroorotate dehydrog 85.0 1.4 4.7E-05 37.5 5.7 78 71-151 231-323 (336)
232 3feq_A Putative amidohydrolase 84.7 9 0.00031 32.2 10.7 79 64-145 168-251 (423)
233 3my9_A Muconate cycloisomerase 84.6 19 0.00064 31.1 14.1 116 2-149 156-275 (377)
234 3aal_A Probable endonuclease 4 84.6 3.4 0.00012 33.9 7.8 79 66-147 19-115 (303)
235 2bdq_A Copper homeostasis prot 84.6 5.5 0.00019 32.9 8.9 74 65-146 133-207 (224)
236 3lmz_A Putative sugar isomeras 84.1 3.2 0.00011 33.1 7.3 124 2-151 38-168 (257)
237 3go2_A Putative L-alanine-DL-g 83.8 17 0.00059 31.8 12.5 74 66-157 225-302 (409)
238 3fcp_A L-Ala-D/L-Glu epimerase 83.8 20 0.00067 31.0 12.7 110 6-147 162-275 (381)
239 3va8_A Probable dehydratase; e 83.8 6.5 0.00022 35.2 9.8 111 3-146 202-314 (445)
240 3jva_A Dipeptide epimerase; en 83.7 20 0.00067 30.6 13.0 115 2-149 149-267 (354)
241 3zwt_A Dihydroorotate dehydrog 83.7 2.2 7.4E-05 37.5 6.5 79 69-150 238-331 (367)
242 4e5t_A Mandelate racemase / mu 83.7 15 0.00052 32.1 12.0 113 2-146 161-289 (404)
243 4ef8_A Dihydroorotate dehydrog 83.6 1.1 3.9E-05 39.1 4.6 83 65-151 204-311 (354)
244 4exq_A UPD, URO-D, uroporphyri 83.5 1.6 5.4E-05 38.1 5.5 122 62-188 180-327 (368)
245 3eez_A Putative mandelate race 83.5 7 0.00024 33.9 9.7 112 2-149 155-270 (378)
246 3lab_A Putative KDPG (2-keto-3 83.4 2.6 8.8E-05 34.7 6.4 112 2-150 80-191 (217)
247 3vdg_A Probable glucarate dehy 83.1 15 0.00052 32.8 12.0 111 3-146 204-316 (445)
248 1qtw_A Endonuclease IV; DNA re 83.1 5.3 0.00018 31.9 8.2 79 65-146 12-109 (285)
249 2x7v_A Probable endonuclease 4 83.0 4.4 0.00015 32.4 7.7 78 66-146 13-109 (287)
250 3ro6_B Putative chloromuconate 82.9 10 0.00035 32.5 10.4 115 2-149 150-269 (356)
251 3t6k_A Response regulator rece 82.9 9.8 0.00034 26.7 8.8 69 64-142 34-103 (136)
252 1tv5_A Dhodehase, dihydroorota 82.9 1.6 5.5E-05 39.4 5.4 80 69-151 315-407 (443)
253 3vc5_A Mandelate racemase/muco 82.8 15 0.00052 32.7 11.8 112 3-147 199-312 (441)
254 3cwo_X Beta/alpha-barrel prote 82.8 2.6 8.7E-05 32.5 6.0 72 64-147 11-83 (237)
255 3vni_A Xylose isomerase domain 82.7 17 0.00058 29.1 11.2 146 2-151 25-189 (294)
256 3rr1_A GALD, putative D-galact 82.7 14 0.00047 32.5 11.4 115 2-147 135-260 (405)
257 3tj4_A Mandelate racemase; eno 82.6 23 0.00078 30.5 12.9 114 2-147 161-279 (372)
258 3hq1_A 2-isopropylmalate synth 82.5 5.5 0.00019 37.7 9.1 117 17-144 182-309 (644)
259 1x1o_A Nicotinate-nucleotide p 82.5 2.5 8.5E-05 36.0 6.2 57 2-84 211-267 (286)
260 3sbf_A Mandelate racemase / mu 82.5 15 0.00053 32.0 11.6 68 66-148 213-284 (401)
261 1rpx_A Protein (ribulose-phosp 82.5 3.3 0.00011 32.9 6.7 77 65-147 23-99 (230)
262 1xg4_A Probable methylisocitra 82.4 8.8 0.0003 32.7 9.7 73 68-158 171-247 (295)
263 3tjl_A NADPH dehydrogenase; OL 82.3 4.6 0.00016 36.0 8.2 137 2-150 176-350 (407)
264 1kbi_A Cytochrome B2, L-LCR; f 82.3 5 0.00017 36.7 8.6 76 65-145 257-370 (511)
265 3ozy_A Putative mandelate race 82.2 19 0.00064 31.3 12.0 112 2-146 161-277 (389)
266 3t6c_A RSPA, putative MAND fam 82.2 16 0.00054 32.5 11.7 68 66-148 252-323 (440)
267 1m3u_A 3-methyl-2-oxobutanoate 82.1 8.9 0.0003 32.3 9.4 62 5-84 35-113 (264)
268 3ih1_A Methylisocitrate lyase; 81.6 11 0.00037 32.4 10.0 65 76-158 186-255 (305)
269 3gnh_A L-lysine, L-arginine ca 81.5 22 0.00074 29.6 13.5 60 63-123 162-227 (403)
270 2e6f_A Dihydroorotate dehydrog 81.5 5.3 0.00018 33.4 7.9 81 66-151 172-278 (314)
271 3tha_A Tryptophan synthase alp 81.2 5.7 0.00019 33.2 7.9 119 2-153 111-234 (252)
272 1o66_A 3-methyl-2-oxobutanoate 81.0 13 0.00045 31.5 10.1 122 5-158 35-196 (275)
273 2vm8_A Dihydropyrimidinase-rel 80.9 4.6 0.00016 35.4 7.7 69 66-140 159-228 (501)
274 3to5_A CHEY homolog; alpha(5)b 80.9 12 0.0004 27.6 8.9 67 65-141 44-111 (134)
275 1jvn_A Glutamine, bifunctional 80.5 2.6 9E-05 38.8 6.1 81 64-151 279-372 (555)
276 2z00_A Dihydroorotase; zinc bi 80.4 4.3 0.00015 34.3 7.1 101 2-124 75-176 (426)
277 3o07_A Pyridoxine biosynthesis 79.6 4.6 0.00016 34.7 6.8 84 64-151 122-234 (291)
278 3ojc_A Putative aspartate/glut 79.5 2.6 9E-05 34.3 5.2 63 67-149 65-128 (231)
279 3eoo_A Methylisocitrate lyase; 78.9 16 0.00053 31.3 10.0 52 101-158 195-251 (298)
280 3r0u_A Enzyme of enolase super 78.9 32 0.0011 29.8 14.5 115 2-149 152-272 (379)
281 2nli_A Lactate oxidase; flavoe 78.8 7 0.00024 34.1 8.0 77 65-146 143-257 (368)
282 1ypf_A GMP reductase; GUAC, pu 78.7 3.5 0.00012 35.3 6.0 65 69-145 110-176 (336)
283 3fv9_G Mandelate racemase/muco 78.7 22 0.00076 30.8 11.2 67 66-149 206-276 (386)
284 3q45_A Mandelate racemase/muco 78.5 21 0.00072 30.7 11.0 113 2-147 150-266 (368)
285 1jfl_A Aspartate racemase; alp 77.4 2.1 7.3E-05 34.2 4.0 61 69-149 65-126 (228)
286 2hjp_A Phosphonopyruvate hydro 77.1 18 0.00062 30.6 9.9 70 76-158 177-247 (290)
287 1r30_A Biotin synthase; SAM ra 77.0 14 0.00049 31.4 9.4 88 64-158 98-188 (369)
288 4adt_A Pyridoxine biosynthetic 76.9 10 0.00035 32.3 8.3 75 63-146 27-107 (297)
289 3l0g_A Nicotinate-nucleotide p 76.9 4.1 0.00014 35.1 5.8 70 2-103 222-291 (300)
290 4hpn_A Putative uncharacterize 76.8 34 0.0012 29.2 12.3 112 3-147 155-270 (378)
291 4h83_A Mandelate racemase/muco 76.8 31 0.0011 29.8 11.6 112 2-147 174-292 (388)
292 1gvf_A Tagatose-bisphosphate a 76.8 2.2 7.7E-05 36.4 4.1 33 115-147 73-105 (286)
293 3tqv_A Nicotinate-nucleotide p 76.8 19 0.00066 30.6 10.0 105 8-149 169-273 (287)
294 4e7p_A Response regulator; DNA 76.8 17 0.00059 25.7 8.5 68 63-142 51-119 (150)
295 2ze3_A DFA0005; organic waste 76.7 4.9 0.00017 33.9 6.2 74 66-145 25-111 (275)
296 1vrd_A Inosine-5'-monophosphat 76.6 4.9 0.00017 36.0 6.5 66 68-145 240-305 (494)
297 2zay_A Response regulator rece 76.5 17 0.00058 25.4 8.4 70 64-143 38-108 (147)
298 3gt7_A Sensor protein; structu 76.4 18 0.00063 25.8 9.0 69 64-142 37-106 (154)
299 1vcf_A Isopentenyl-diphosphate 76.3 4.5 0.00015 34.4 5.9 75 65-145 132-211 (332)
300 3vav_A 3-methyl-2-oxobutanoate 76.3 14 0.00047 31.3 8.9 87 4-122 46-148 (275)
301 4af0_A Inosine-5'-monophosphat 76.2 28 0.00097 32.4 11.6 123 3-149 289-416 (556)
302 3b2n_A Uncharacterized protein 76.2 16 0.00056 25.2 8.5 67 64-142 35-102 (133)
303 3kws_A Putative sugar isomeras 76.2 28 0.00096 27.8 11.5 142 2-151 46-203 (287)
304 3eul_A Possible nitrate/nitrit 76.1 18 0.00062 25.5 8.9 68 64-143 47-115 (152)
305 2zsk_A PH1733, 226AA long hypo 75.9 3.2 0.00011 33.2 4.6 25 68-92 63-87 (226)
306 2nzl_A Hydroxyacid oxidase 1; 75.8 8.5 0.00029 33.9 7.7 44 98-146 237-280 (392)
307 4dxk_A Mandelate racemase / mu 75.8 19 0.00066 31.4 10.0 67 66-147 222-292 (400)
308 3tva_A Xylose isomerase domain 75.8 17 0.00057 29.2 9.0 142 2-151 29-189 (290)
309 3q94_A Fructose-bisphosphate a 75.8 2.2 7.6E-05 36.5 3.8 33 115-147 79-111 (288)
310 3tji_A Mandelate racemase/muco 75.6 17 0.0006 32.0 9.8 68 66-148 234-305 (422)
311 1vc4_A Indole-3-glycerol phosp 75.5 32 0.0011 28.2 12.5 95 38-150 45-139 (254)
312 3p6l_A Sugar phosphate isomera 75.5 10 0.00036 30.0 7.6 82 66-147 23-112 (262)
313 1gkr_A Hydantoinase, non-ATP d 75.2 14 0.00048 31.4 8.9 104 2-124 81-185 (458)
314 1zfj_A Inosine monophosphate d 75.2 3.7 0.00013 36.6 5.3 68 67-146 235-302 (491)
315 3dgb_A Muconate cycloisomerase 75.0 40 0.0014 29.0 14.9 115 3-149 159-278 (382)
316 3iix_A Biotin synthetase, puta 74.8 12 0.00041 31.2 8.2 124 3-146 96-228 (348)
317 3dip_A Enolase; structural gen 74.8 43 0.0015 29.3 13.2 67 66-146 225-295 (410)
318 3tsm_A IGPS, indole-3-glycerol 74.6 14 0.00048 31.0 8.5 93 39-148 59-151 (272)
319 1qpo_A Quinolinate acid phosph 74.5 5.3 0.00018 33.9 5.8 70 2-103 209-281 (284)
320 3hzh_A Chemotaxis response reg 74.5 21 0.00071 25.6 8.5 67 64-142 67-136 (157)
321 3p0w_A Mandelate racemase/muco 74.0 22 0.00074 32.0 10.1 113 3-147 211-330 (470)
322 3g8r_A Probable spore coat pol 74.0 28 0.00094 30.5 10.4 77 25-136 78-154 (350)
323 4gj1_A 1-(5-phosphoribosyl)-5- 73.9 34 0.0012 27.7 11.9 130 2-149 92-227 (243)
324 3hv2_A Response regulator/HD d 73.8 21 0.00072 25.3 8.7 66 64-141 44-111 (153)
325 1p4c_A L(+)-mandelate dehydrog 73.7 4.6 0.00016 35.3 5.4 43 98-145 210-252 (380)
326 3lte_A Response regulator; str 73.7 19 0.00063 24.6 7.9 68 64-142 36-104 (132)
327 3m5v_A DHDPS, dihydrodipicolin 73.6 35 0.0012 28.6 10.8 110 3-138 37-161 (301)
328 3iix_A Biotin synthetase, puta 73.6 16 0.00056 30.4 8.7 76 65-149 84-162 (348)
329 1yxy_A Putative N-acetylmannos 73.4 15 0.0005 29.1 8.0 65 66-148 37-110 (234)
330 3ngf_A AP endonuclease, family 73.4 7 0.00024 31.3 6.1 139 2-151 31-190 (269)
331 3cyj_A Mandelate racemase/muco 73.1 43 0.0015 28.6 12.8 115 2-148 154-272 (372)
332 3ctl_A D-allulose-6-phosphate 73.0 9.8 0.00033 31.0 6.9 82 61-149 9-90 (231)
333 1o12_A N-acetylglucosamine-6-p 72.9 34 0.0012 29.0 10.7 37 2-38 81-118 (376)
334 3i65_A Dihydroorotate dehydrog 72.7 5.6 0.00019 35.7 5.7 81 67-150 285-378 (415)
335 2ozt_A TLR1174 protein; struct 72.6 43 0.0015 28.3 14.0 113 2-146 126-245 (332)
336 3pfr_A Mandelate racemase/muco 72.4 29 0.00099 30.9 10.5 113 3-147 196-315 (455)
337 3mzn_A Glucarate dehydratase; 72.3 24 0.00083 31.4 10.0 113 3-147 193-312 (450)
338 4avf_A Inosine-5'-monophosphat 72.1 4.7 0.00016 36.5 5.2 67 67-145 231-297 (490)
339 2q02_A Putative cytoplasmic pr 72.0 22 0.00076 27.9 8.8 21 66-86 20-40 (272)
340 1tqj_A Ribulose-phosphate 3-ep 72.0 7.4 0.00025 31.4 6.0 79 63-147 15-93 (230)
341 4fxs_A Inosine-5'-monophosphat 71.8 5.4 0.00019 36.2 5.6 68 66-145 232-299 (496)
342 3dx5_A Uncharacterized protein 71.8 5.4 0.00018 32.0 5.1 139 2-150 23-176 (286)
343 1sjd_A N-acylamino acid racema 70.9 26 0.00089 29.8 9.5 109 2-146 151-263 (368)
344 2wqp_A Polysialic acid capsule 70.8 29 0.00099 30.3 9.8 76 26-136 92-167 (349)
345 1srr_A SPO0F, sporulation resp 70.8 21 0.00073 24.0 8.6 66 64-141 33-99 (124)
346 1yx1_A Hypothetical protein PA 70.8 24 0.00083 27.9 8.8 123 2-147 31-164 (264)
347 3tak_A DHDPS, dihydrodipicolin 70.8 39 0.0013 28.1 10.4 109 3-138 31-154 (291)
348 3jte_A Response regulator rece 70.6 24 0.00081 24.5 8.6 67 64-142 33-102 (143)
349 3hdg_A Uncharacterized protein 70.4 23 0.00079 24.3 8.2 68 63-142 36-104 (137)
350 3nhm_A Response regulator; pro 70.2 13 0.00046 25.4 6.3 68 63-141 32-100 (133)
351 3v3w_A Starvation sensing prot 70.0 42 0.0014 29.5 10.9 67 66-147 238-308 (424)
352 3b8i_A PA4872 oxaloacetate dec 69.9 50 0.0017 27.9 11.4 70 69-156 173-244 (287)
353 1rvg_A Fructose-1,6-bisphospha 69.8 3.8 0.00013 35.4 3.8 33 115-147 71-103 (305)
354 3qja_A IGPS, indole-3-glycerol 69.8 39 0.0013 28.1 10.1 93 37-146 50-142 (272)
355 1s2w_A Phosphoenolpyruvate pho 69.8 8.1 0.00028 32.9 5.9 77 66-145 28-113 (295)
356 3n9r_A Fructose-bisphosphate a 69.5 4.1 0.00014 35.2 4.0 32 116-147 74-105 (307)
357 1x1o_A Nicotinate-nucleotide p 69.4 24 0.00082 29.8 8.8 102 9-149 167-271 (286)
358 1ur4_A Galactanase; hydrolase, 69.1 60 0.0021 28.6 12.6 122 5-132 59-212 (399)
359 2hk0_A D-psicose 3-epimerase; 68.8 13 0.00044 30.4 6.8 147 2-151 44-208 (309)
360 2qiw_A PEP phosphonomutase; st 68.8 8.9 0.0003 31.9 5.8 77 66-145 29-112 (255)
361 2ojp_A DHDPS, dihydrodipicolin 68.8 49 0.0017 27.4 11.4 108 3-138 31-154 (292)
362 2j6v_A UV endonuclease, UVDE; 68.7 24 0.00083 29.6 8.7 100 21-128 57-170 (301)
363 3qxb_A Putative xylose isomera 68.6 16 0.00053 30.0 7.3 148 3-150 44-217 (316)
364 1gox_A (S)-2-hydroxy-acid oxid 68.6 32 0.0011 29.7 9.7 45 98-147 210-254 (370)
365 2rfg_A Dihydrodipicolinate syn 68.6 51 0.0017 27.5 10.8 108 3-138 30-153 (297)
366 2vc6_A MOSA, dihydrodipicolina 68.5 33 0.0011 28.5 9.5 107 3-137 30-152 (292)
367 4hnl_A Mandelate racemase/muco 68.4 34 0.0012 29.8 9.9 68 65-147 232-303 (421)
368 1jub_A Dihydroorotate dehydrog 68.2 8.3 0.00028 32.1 5.6 72 68-145 109-191 (311)
369 3f4w_A Putative hexulose 6 pho 68.0 9.1 0.00031 29.7 5.5 76 63-148 8-86 (211)
370 2gkg_A Response regulator homo 67.9 17 0.00059 24.2 6.4 69 64-142 35-104 (127)
371 3r4e_A Mandelate racemase/muco 67.9 43 0.0015 29.3 10.4 67 66-147 232-302 (418)
372 2qvg_A Two component response 67.8 27 0.00092 24.1 7.7 70 63-142 38-114 (143)
373 2isw_A Putative fructose-1,6-b 67.7 4.8 0.00016 35.0 4.1 97 27-147 6-106 (323)
374 1xky_A Dihydrodipicolinate syn 67.5 52 0.0018 27.5 10.5 108 3-138 42-165 (301)
375 3p6l_A Sugar phosphate isomera 67.5 43 0.0015 26.3 10.5 123 2-150 30-168 (262)
376 3cnb_A DNA-binding response re 67.5 27 0.00092 23.9 9.0 70 64-143 40-110 (143)
377 2gzm_A Glutamate racemase; enz 67.4 10 0.00036 31.2 6.0 63 67-148 54-118 (267)
378 3flu_A DHDPS, dihydrodipicolin 67.4 52 0.0018 27.4 10.5 109 3-138 37-160 (297)
379 2cu0_A Inosine-5'-monophosphat 67.3 24 0.00083 31.5 8.9 80 66-151 278-362 (486)
380 1jcn_A Inosine monophosphate d 67.3 12 0.00041 33.7 6.8 67 67-145 257-323 (514)
381 3r0j_A Possible two component 67.2 30 0.001 27.0 8.6 66 64-141 53-119 (250)
382 4hjf_A Ggdef family protein; s 67.2 6.5 0.00022 33.6 4.8 59 5-82 245-307 (340)
383 3f6p_A Transcriptional regulat 67.1 25 0.00085 23.8 7.2 65 64-141 32-97 (120)
384 3eod_A Protein HNR; response r 67.0 27 0.00092 23.7 8.3 69 64-143 37-105 (130)
385 1mxs_A KDPG aldolase; 2-keto-3 67.0 8.7 0.0003 31.2 5.3 71 65-150 127-198 (225)
386 4g8t_A Glucarate dehydratase; 66.8 40 0.0014 30.0 10.1 109 5-145 216-329 (464)
387 1s2w_A Phosphoenolpyruvate pho 66.8 58 0.002 27.5 12.4 131 2-158 102-250 (295)
388 3d0c_A Dihydrodipicolinate syn 66.8 44 0.0015 28.2 10.0 105 3-137 42-159 (314)
389 1vli_A Spore coat polysacchari 66.7 32 0.0011 30.5 9.3 76 26-136 102-177 (385)
390 4aaj_A N-(5'-phosphoribosyl)an 66.6 27 0.00092 28.4 8.3 42 63-112 27-68 (228)
391 2nv1_A Pyridoxal biosynthesis 66.5 21 0.00073 29.7 7.9 71 66-144 29-105 (305)
392 3l21_A DHDPS, dihydrodipicolin 66.4 57 0.002 27.3 10.9 108 3-138 45-168 (304)
393 3ajx_A 3-hexulose-6-phosphate 66.4 4.5 0.00016 31.4 3.4 73 63-145 8-83 (207)
394 1o5k_A DHDPS, dihydrodipicolin 66.3 50 0.0017 27.7 10.2 108 3-138 42-166 (306)
395 4e4u_A Mandalate racemase/muco 66.3 67 0.0023 28.0 13.6 113 2-146 154-282 (412)
396 2czd_A Orotidine 5'-phosphate 66.3 1.1 3.7E-05 35.6 -0.3 88 63-157 7-96 (208)
397 2ehh_A DHDPS, dihydrodipicolin 66.2 56 0.0019 27.1 12.4 111 3-138 30-154 (294)
398 3cu2_A Ribulose-5-phosphate 3- 66.1 3.4 0.00012 34.1 2.7 69 78-150 148-221 (237)
399 3i42_A Response regulator rece 65.8 11 0.00039 25.6 5.1 67 64-141 33-100 (127)
400 3dz1_A Dihydrodipicolinate syn 65.7 50 0.0017 27.8 10.1 108 3-137 38-160 (313)
401 1o4u_A Type II quinolic acid p 65.4 14 0.00047 31.4 6.4 59 2-85 208-268 (285)
402 3cz5_A Two-component response 65.3 33 0.0011 24.1 8.5 68 64-143 37-105 (153)
403 1i60_A IOLI protein; beta barr 65.2 7.5 0.00026 30.7 4.6 134 2-137 22-162 (278)
404 3rqi_A Response regulator prot 65.2 17 0.00058 27.0 6.4 67 64-142 37-104 (184)
405 3qze_A DHDPS, dihydrodipicolin 65.1 56 0.0019 27.5 10.3 109 3-138 53-176 (314)
406 3kht_A Response regulator; PSI 65.1 26 0.00089 24.4 7.1 70 63-142 36-106 (144)
407 2j48_A Two-component sensor ki 64.9 25 0.00086 22.8 6.7 65 64-141 31-96 (119)
408 3t8y_A CHEB, chemotaxis respon 64.9 37 0.0013 24.5 8.1 67 64-142 57-125 (164)
409 3grc_A Sensor protein, kinase; 64.5 11 0.00039 26.1 5.0 70 64-142 36-106 (140)
410 3vcn_A Mannonate dehydratase; 64.4 35 0.0012 30.0 9.2 67 66-147 239-309 (425)
411 3f6c_A Positive transcription 64.3 14 0.00047 25.3 5.4 67 64-142 32-99 (134)
412 1k66_A Phytochrome response re 64.3 31 0.001 23.8 7.3 70 63-142 37-117 (149)
413 3uhf_A Glutamate racemase; str 64.3 4.6 0.00016 34.0 3.2 71 69-158 77-154 (274)
414 3mm4_A Histidine kinase homolo 64.3 45 0.0015 25.3 9.2 69 64-141 92-176 (206)
415 3pm6_A Putative fructose-bisph 64.3 5.6 0.00019 34.3 3.8 96 26-147 14-121 (306)
416 3ibs_A Conserved hypothetical 64.3 9 0.00031 29.4 4.8 48 66-113 127-189 (218)
417 1a04_A Nitrate/nitrite respons 64.2 39 0.0013 25.4 8.5 67 64-142 37-104 (215)
418 1xrt_A Dihydroorotase, dhoase; 64.2 8.6 0.00029 33.4 5.1 102 2-125 126-228 (467)
419 3gnn_A Nicotinate-nucleotide p 64.1 12 0.0004 32.1 5.8 69 2-102 224-292 (298)
420 3eoo_A Methylisocitrate lyase; 63.9 18 0.00061 30.9 6.9 74 66-145 31-117 (298)
421 3sgz_A Hydroxyacid oxidase 2; 63.6 10 0.00036 33.1 5.5 43 98-145 202-244 (352)
422 2wkj_A N-acetylneuraminate lya 63.6 65 0.0022 26.9 12.6 111 3-138 41-165 (303)
423 3ic4_A Glutaredoxin (GRX-1); s 63.6 17 0.00057 24.0 5.5 63 68-137 26-91 (92)
424 1k68_A Phytochrome response re 63.5 32 0.0011 23.3 7.9 70 63-142 33-110 (140)
425 2rjn_A Response regulator rece 63.4 36 0.0012 23.9 7.8 66 64-141 37-104 (154)
426 1z41_A YQJM, probable NADH-dep 63.1 23 0.0008 30.0 7.6 124 21-147 79-250 (338)
427 3vni_A Xylose isomerase domain 63.1 28 0.00095 27.8 7.7 72 65-144 17-106 (294)
428 3paj_A Nicotinate-nucleotide p 63.1 21 0.0007 30.9 7.2 58 2-85 246-303 (320)
429 2qr3_A Two-component system re 62.9 33 0.0011 23.4 7.2 74 64-143 33-106 (140)
430 3heb_A Response regulator rece 62.9 37 0.0012 23.8 7.7 70 63-142 35-114 (152)
431 2ayx_A Sensor kinase protein R 62.9 33 0.0011 27.2 8.1 67 64-142 159-226 (254)
432 3mpg_A Dihydroorotase, dhoase; 62.9 11 0.00037 32.3 5.4 103 2-126 79-182 (428)
433 2jfq_A Glutamate racemase; cel 62.8 13 0.00043 31.1 5.7 62 68-148 74-137 (286)
434 1zco_A 2-dehydro-3-deoxyphosph 62.8 35 0.0012 28.2 8.4 74 28-136 77-150 (262)
435 2ftp_A Hydroxymethylglutaryl-C 62.7 49 0.0017 27.6 9.4 76 64-149 26-106 (302)
436 2fli_A Ribulose-phosphate 3-ep 62.7 5.3 0.00018 31.3 3.1 47 102-150 154-202 (220)
437 1tmy_A CHEY protein, TMY; chem 62.2 32 0.0011 22.9 8.1 67 64-142 33-100 (120)
438 2zc8_A N-acylamino acid racema 62.2 72 0.0024 27.0 10.6 110 2-148 151-264 (369)
439 2qxy_A Response regulator; reg 62.2 28 0.00095 24.1 6.8 67 64-142 34-100 (142)
440 3be7_A Zn-dependent arginine c 62.2 44 0.0015 27.8 9.1 75 64-140 162-262 (408)
441 1ub3_A Aldolase protein; schif 62.1 55 0.0019 26.4 9.3 121 2-149 79-208 (220)
442 2jfz_A Glutamate racemase; cel 61.7 10 0.00035 30.9 4.9 62 68-148 52-117 (255)
443 1bf6_A Phosphotriesterase homo 61.7 23 0.0008 28.1 7.0 41 2-46 41-81 (291)
444 1ep3_A Dihydroorotate dehydrog 61.7 9.4 0.00032 31.5 4.7 74 68-145 114-195 (311)
445 1mb3_A Cell division response 61.4 33 0.0011 22.9 6.9 68 64-141 31-99 (124)
446 4f0r_A 5-methylthioadenosine/S 61.2 57 0.0019 27.6 9.7 99 2-124 118-221 (447)
447 2hjp_A Phosphonopyruvate hydro 61.1 15 0.0005 31.2 5.9 77 66-145 24-109 (290)
448 4e4f_A Mannonate dehydratase; 60.8 65 0.0022 28.3 10.3 114 2-143 159-305 (426)
449 3vk5_A MOEO5; TIM barrel, tran 60.8 12 0.00041 32.0 5.2 49 100-150 212-260 (286)
450 3tqv_A Nicotinate-nucleotide p 60.8 14 0.00046 31.6 5.5 70 2-103 213-282 (287)
451 3aam_A Endonuclease IV, endoiv 60.7 54 0.0018 25.8 9.0 136 2-149 22-172 (270)
452 2q02_A Putative cytoplasmic pr 60.6 25 0.00087 27.6 7.0 79 3-93 94-176 (272)
453 2xed_A Putative maleate isomer 60.6 5.8 0.0002 33.0 3.2 76 65-148 77-154 (273)
454 3daq_A DHDPS, dihydrodipicolin 60.5 72 0.0025 26.4 10.2 109 3-138 32-155 (292)
455 1eep_A Inosine 5'-monophosphat 60.4 14 0.00049 32.1 5.8 67 67-145 155-221 (404)
456 2e6f_A Dihydroorotate dehydrog 60.3 12 0.00041 31.1 5.1 70 70-144 111-193 (314)
457 3mwc_A Mandelate racemase/muco 60.2 74 0.0025 27.6 10.5 61 74-149 227-288 (400)
458 1y0e_A Putative N-acetylmannos 60.2 33 0.0011 26.6 7.5 57 74-148 32-97 (223)
459 3s83_A Ggdef family protein; s 60.1 13 0.00046 29.7 5.2 59 5-82 172-234 (259)
460 1qkk_A DCTD, C4-dicarboxylate 60.1 40 0.0014 23.7 7.4 68 64-143 33-101 (155)
461 1r30_A Biotin synthase; SAM ra 60.0 17 0.00058 30.9 6.1 67 4-88 112-179 (369)
462 2g0w_A LMO2234 protein; putati 59.8 33 0.0011 27.7 7.7 76 3-94 114-191 (296)
463 3t7v_A Methylornithine synthas 59.7 24 0.00082 29.6 7.0 73 65-149 91-172 (350)
464 2vvt_A Glutamate racemase; iso 59.6 25 0.00084 29.4 7.0 72 68-158 76-152 (290)
465 4dzh_A Amidohydrolase; adenosi 59.5 58 0.002 28.1 9.6 99 2-124 127-230 (472)
466 3cfy_A Putative LUXO repressor 59.4 41 0.0014 23.3 8.0 67 64-142 34-101 (137)
467 4gbu_A NADPH dehydrogenase 1; 59.4 89 0.003 27.2 11.2 141 1-149 179-351 (400)
468 3s81_A Putative aspartate race 59.3 7.2 0.00025 32.5 3.5 61 68-149 89-150 (268)
469 1p6q_A CHEY2; chemotaxis, sign 59.2 38 0.0013 22.8 7.8 68 64-141 37-105 (129)
470 3cg0_A Response regulator rece 59.2 39 0.0013 23.0 9.1 67 64-142 40-107 (140)
471 1xhf_A DYE resistance, aerobic 58.9 37 0.0013 22.6 8.2 66 64-142 33-99 (123)
472 2r6o_A Putative diguanylate cy 58.9 18 0.00063 30.0 6.0 59 5-82 196-258 (294)
473 2qul_A D-tagatose 3-epimerase; 58.8 34 0.0011 27.1 7.5 145 3-150 26-189 (290)
474 1k77_A EC1530, hypothetical pr 58.8 22 0.00074 27.8 6.2 129 2-137 23-166 (260)
475 1j93_A UROD, uroporphyrinogen 58.7 9.6 0.00033 32.4 4.3 119 62-188 176-321 (353)
476 1twd_A Copper homeostasis prot 58.7 29 0.001 29.1 7.2 63 73-144 81-146 (256)
477 3kcn_A Adenylate cyclase homol 58.1 45 0.0015 23.4 7.4 67 63-141 32-101 (151)
478 1wa3_A 2-keto-3-deoxy-6-phosph 58.0 27 0.00092 26.9 6.5 68 65-146 19-89 (205)
479 3dx5_A Uncharacterized protein 57.9 37 0.0013 26.9 7.6 58 24-94 122-179 (286)
480 2h9a_B CO dehydrogenase/acetyl 57.8 20 0.00069 30.7 6.2 74 69-148 79-159 (310)
481 3si9_A DHDPS, dihydrodipicolin 57.8 85 0.0029 26.4 10.2 108 3-137 52-174 (315)
482 3crn_A Response regulator rece 57.7 42 0.0014 22.9 7.9 66 64-141 33-99 (132)
483 2yxg_A DHDPS, dihydrodipicolin 57.7 80 0.0027 26.1 12.4 111 3-138 30-154 (289)
484 1b73_A Glutamate racemase; iso 57.6 12 0.0004 30.5 4.5 64 68-150 52-117 (254)
485 2oho_A Glutamate racemase; iso 57.5 8.2 0.00028 31.9 3.6 64 67-149 63-128 (273)
486 3lua_A Response regulator rece 57.4 43 0.0015 23.0 7.1 67 64-142 35-106 (140)
487 2r8w_A AGR_C_1641P; APC7498, d 57.4 89 0.003 26.5 11.9 111 3-138 64-187 (332)
488 1h1y_A D-ribulose-5-phosphate 57.2 24 0.00082 28.0 6.3 46 64-112 18-63 (228)
489 1r0m_A N-acylamino acid racema 57.1 80 0.0027 26.8 10.0 108 2-146 158-269 (375)
490 4a35_A Mitochondrial enolase s 57.0 1E+02 0.0036 27.2 14.4 116 2-147 211-330 (441)
491 3ih1_A Methylisocitrate lyase; 57.0 13 0.00046 31.8 4.9 75 66-146 38-124 (305)
492 3nav_A Tryptophan synthase alp 56.5 18 0.00062 30.3 5.6 73 64-142 30-128 (271)
493 3dip_A Enolase; structural gen 56.4 5.8 0.0002 34.9 2.6 55 63-127 273-327 (410)
494 3a5f_A Dihydrodipicolinate syn 56.1 85 0.0029 25.9 10.5 111 3-138 31-154 (291)
495 3pjx_A Cyclic dimeric GMP bind 56.0 23 0.00078 30.5 6.3 59 5-82 356-418 (430)
496 3sfw_A Dihydropyrimidinase; hy 55.9 35 0.0012 29.5 7.6 52 67-124 134-185 (461)
497 2qv0_A Protein MRKE; structura 55.5 24 0.00082 24.4 5.4 65 64-142 41-106 (143)
498 1geq_A Tryptophan synthase alp 55.4 24 0.00082 28.0 6.0 41 102-147 69-116 (248)
499 3oix_A Putative dihydroorotate 55.4 15 0.00052 31.8 5.1 82 65-150 204-308 (345)
500 2rdx_A Mandelate racemase/muco 55.3 12 0.00041 32.2 4.4 104 10-128 191-300 (379)
No 1
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=100.00 E-value=2.4e-74 Score=501.23 Aligned_cols=186 Identities=38% Similarity=0.616 Sum_probs=176.6
Q ss_pred ChhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 1 MEAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++||++||||||||||++||||||++||++|++||++||+||+|||+|||.||+... .+..|||||||++|+++||||
T Consensus 97 ~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~--~~~~yT~Peea~~Fv~~TgvD 174 (288)
T 3q94_A 97 KEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIA--EGVIYADPAECKHLVEATGID 174 (288)
T ss_dssp HHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGG--GGCBCCCHHHHHHHHHHHCCS
T ss_pred HHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCC--ccccCCCHHHHHHHHHHHCCC
Confidence 379999999999999999999999999999999999999999999999999988652 345899999999999999999
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHHHHHHHhc--
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRKAYMDSLS-- 158 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~-- 158 (192)
+|||||||+||.|++ +|+|||+||++|++.+ ++|||||||||+|+|+|++||++||+||||+|+++.+|+++++
T Consensus 175 ~LAvaiGt~HG~Y~~-~p~Ld~~~L~~I~~~v---~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~ 250 (288)
T 3q94_A 175 CLAPALGSVHGPYKG-EPNLGFAEMEQVRDFT---GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREV 250 (288)
T ss_dssp EEEECSSCBSSCCSS-SCCCCHHHHHHHHHHH---CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHH
T ss_pred EEEEEcCcccCCcCC-CCccCHHHHHHHHHhc---CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHH
Confidence 999999999999987 5999999999999999 6999999999999999999999999999999999999999987
Q ss_pred ---CCC-CChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 159 ---RPK-SDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 159 ---~~~-~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
+|+ .||++++.+++++|+++++++|++|||.|||
T Consensus 251 ~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~gka 288 (288)
T 3q94_A 251 LNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSNGKA 288 (288)
T ss_dssp HHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 355 4999999999999999999999999999997
No 2
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=100.00 E-value=4.1e-74 Score=499.49 Aligned_cols=188 Identities=39% Similarity=0.624 Sum_probs=170.1
Q ss_pred ChhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 1 MEAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++||++||||||||||++||||||++||++|++||++||+||+|||+|||.||+......+..||||+||++|+++||||
T Consensus 91 ~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD 170 (286)
T 1gvf_A 91 RRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVD 170 (286)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCS
T ss_pred HHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCC
Confidence 37999999999999999999999999999999999999999999999999887764333345899999999999999999
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHHHHHHHhcC-
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRKAYMDSLSR- 159 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~~- 159 (192)
+|||||||+||.|++ +|+||||||++|++.+ ++|||||||||+|+|+|++||++||+||||+|++++||++++++
T Consensus 171 ~LAvaiGt~HG~Y~~-~p~Ld~~~L~~I~~~~---~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~ 246 (286)
T 1gvf_A 171 SLAVAIGTAHGLYSK-TPKIDFQRLAEIREVV---DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAW 246 (286)
T ss_dssp EEEECSSCCSSCCSS-CCCCCHHHHHHHHHHC---CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHH
T ss_pred EEEeecCccccCcCC-CCccCHHHHHHHHHhc---CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHH
Confidence 999999999999997 6999999999999998 69999999999999999999999999999999999999999983
Q ss_pred ----CC-CChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 160 ----PK-SDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 160 ----~~-~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
|+ .||++++.+++++|+++++++|++|||.||+
T Consensus 247 ~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~gka 284 (286)
T 1gvf_A 247 FAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI 284 (286)
T ss_dssp HHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 44 5899999999999999999999999999996
No 3
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=100.00 E-value=6.8e-73 Score=495.44 Aligned_cols=189 Identities=38% Similarity=0.658 Sum_probs=171.0
Q ss_pred ChhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 1 MEAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++||++||||||||||++||||||++||++|++||++|++||+|||+|||.||+....+.+..||||+||++|+++||||
T Consensus 91 ~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD 170 (307)
T 3n9r_A 91 EKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVD 170 (307)
T ss_dssp HHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCS
T ss_pred HHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCC
Confidence 37999999999999999999999999999999999999999999999999998876444456899999999999999999
Q ss_pred EEEEecCcCCCCCCC-CCCCCCHHHHHHHHhhhccCCccEEeecCC---------------------CCCHHHHHHHHhc
Q 029526 81 ALAVCIGNVHGKYPS-SGPNLKLDLLKDLHALSSKKGVLLVLHGAS---------------------GLSAELIKGCIER 138 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS---------------------G~~~e~~~~~i~~ 138 (192)
+|||||||+||.|+. ++|+|||+||++|++.+ ++|||||||| |+|+|+|++||++
T Consensus 171 ~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~---~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~ 247 (307)
T 3n9r_A 171 YLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT---NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKG 247 (307)
T ss_dssp EEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH---CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHT
T ss_pred EEEEecCCcccccCCCCCCccCHHHHHHHHhcC---CCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHc
Confidence 999999999999983 36999999999998877 6999999999 9999999999999
Q ss_pred CCeEeecchHHHHHHHHHhc-----CCC-CChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 139 GVRKFNVNTEVRKAYMDSLS-----RPK-SDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 139 Gi~KINi~T~l~~a~~~~~~-----~~~-~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
||+||||+|+++.||+++++ +|+ .||++++.+++++|+++++++|++|||.|||
T Consensus 248 GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~gka 307 (307)
T 3n9r_A 248 GINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI 307 (307)
T ss_dssp TEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred CceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999997 354 5999999999999999999999999999996
No 4
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=100.00 E-value=1.7e-72 Score=492.53 Aligned_cols=189 Identities=41% Similarity=0.628 Sum_probs=174.0
Q ss_pred ChhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 1 MEAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++||++||||||||||++||||||++||++|++||++||+||+|||+|||.||+......+..||||+||++|+++||||
T Consensus 89 ~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD 168 (305)
T 1rvg_A 89 LRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGAD 168 (305)
T ss_dssp HHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCS
T ss_pred HHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCC
Confidence 37999999999999999999999999999999999999999999999999888754333355899999999999999999
Q ss_pred EEEEecCcCCCCCCC-CCCCCCHHHHHHHHhhhccCCccEEeecCC---------------------CCCHHHHHHHHhc
Q 029526 81 ALAVCIGNVHGKYPS-SGPNLKLDLLKDLHALSSKKGVLLVLHGAS---------------------GLSAELIKGCIER 138 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS---------------------G~~~e~~~~~i~~ 138 (192)
+|||||||+||.|++ ++|+||||||++|++++ ++|||||||| |+|+|+|++||++
T Consensus 169 ~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~---~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~ 245 (305)
T 1rvg_A 169 YLAVAIGTSHGAYKGKGRPFIDHARLERIARLV---PAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISL 245 (305)
T ss_dssp EEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC---CSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHT
T ss_pred EEEEecCccccccCCCCCCccCHHHHHHHHHhc---CCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHC
Confidence 999999999999993 26999999999999998 6999999999 9999999999999
Q ss_pred CCeEeecchHHHHHHHHHhcC-----CC-CChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 139 GVRKFNVNTEVRKAYMDSLSR-----PK-SDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 139 Gi~KINi~T~l~~a~~~~~~~-----~~-~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
||+||||+|+++.||++++++ |+ .||++++.+++++|+++++++|++|||.|||
T Consensus 246 GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~gka 305 (305)
T 1rvg_A 246 GIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA 305 (305)
T ss_dssp TEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred CCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999983 54 5899999999999999999999999999996
No 5
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=100.00 E-value=4.9e-71 Score=486.32 Aligned_cols=186 Identities=39% Similarity=0.651 Sum_probs=165.7
Q ss_pred ChhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 1 MEAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++||++||||||||||++||||||++||++|++||++||+||+|||+|||.||+. + .+..||||+||++|+++||||
T Consensus 92 ~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v--~-~~~~yTdPeea~~Fv~~TgvD 168 (323)
T 2isw_A 92 KMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDV--Q-NTVQLTEPQDAKKFVELTGVD 168 (323)
T ss_dssp HHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC-------------CCCCCHHHHHHHHHHHCCS
T ss_pred HHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCc--c-cccccCCHHHHHHHHHHHCCC
Confidence 3799999999999999999999999999999999999999999999999988875 2 255899999999999999999
Q ss_pred EEEEecCcCCCCCC-CCCCC--CCHHHHHHHHhhhccCCccEEeecCC---------------------CCCHHHHHHHH
Q 029526 81 ALAVCIGNVHGKYP-SSGPN--LKLDLLKDLHALSSKKGVLLVLHGAS---------------------GLSAELIKGCI 136 (192)
Q Consensus 81 ~LAvaiGt~HG~y~-~~~p~--ld~~~L~~I~~~~~~~~iPLVlHGgS---------------------G~~~e~~~~~i 136 (192)
+|||||||+||.|+ +++|+ ||||||++|++++ ++|||||||| |+|+|+|++||
T Consensus 169 ~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~---~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai 245 (323)
T 2isw_A 169 ALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT---GIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAI 245 (323)
T ss_dssp EEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH---CSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHH
T ss_pred EEEEecCccccccCCCCCcccccCHHHHHHHHHHh---CCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHH
Confidence 99999999999999 22699 9999999999999 6999999999 99999999999
Q ss_pred hcCCeEeecchHHHHHHHHHhc-----CCC-CChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 137 ERGVRKFNVNTEVRKAYMDSLS-----RPK-SDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 137 ~~Gi~KINi~T~l~~a~~~~~~-----~~~-~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
++||+||||+|+++.||+++++ +|+ .||++++.+++++|+++++++|++|||.||+
T Consensus 246 ~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~gka 307 (323)
T 2isw_A 246 GEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSAGHA 307 (323)
T ss_dssp HTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCTTCT
T ss_pred HCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999999987 344 4999999999999999999999999999986
No 6
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=100.00 E-value=1.1e-70 Score=480.66 Aligned_cols=190 Identities=38% Similarity=0.583 Sum_probs=176.2
Q ss_pred Chhhhc--------CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCcccc-ccccCCCHHHHH
Q 029526 1 MEAIVL--------GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVED-YEAKLTDVNQAE 71 (192)
Q Consensus 1 ~~ai~~--------GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~-~~~~~T~peea~ 71 (192)
++||++ ||||||||||++||||||++||++|++||++|++||+|||+|||.||+..... .+..||||+||+
T Consensus 99 ~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~ 178 (306)
T 3pm6_A 99 KRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESE 178 (306)
T ss_dssp HHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHH
T ss_pred HHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHH
Confidence 379999 99999999999999999999999999999999999999999999998875322 246899999999
Q ss_pred HHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 72 EFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 72 ~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+|+ +||||+|||||||+||.|++++|+|||+||++|++.++ .++|||||||||+|+|+|++||++||+||||+|+++.
T Consensus 179 ~Fv-~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~-~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~ 256 (306)
T 3pm6_A 179 EFV-ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVG-ERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNN 256 (306)
T ss_dssp HHH-TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHT-TTSEEEECSCTTCCHHHHHHHHHTTEEEEEESHHHHH
T ss_pred HHH-HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhC-CCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeChHHHH
Confidence 999 89999999999999999986569999999999999983 1599999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 152 AYMDSLSR--PKSDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 152 a~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
+|++++++ ...+|++++..++++|++.|+++|++|||.|||
T Consensus 257 a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~gka 299 (306)
T 3pm6_A 257 EYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGKA 299 (306)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTGG
T ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 99999985 346899999999999999999999999999986
No 7
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=100.00 E-value=1.6e-69 Score=481.13 Aligned_cols=191 Identities=27% Similarity=0.364 Sum_probs=166.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhC---
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETD--- 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tg--- 78 (192)
+||++||||||||||++||||||++||++|++||++|++||+|||+|||.||+......+..|||||||++|+++||
T Consensus 119 ~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~ 198 (349)
T 3elf_A 119 KGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGE 198 (349)
T ss_dssp TTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC-------------CCCHHHHHHHHHHHTTST
T ss_pred HHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeccccccCCcccccccccCCCHHHHHHHHHHhCCCC
Confidence 56788999999999999999999999999999999999999999999999988754333568999999999999999
Q ss_pred --CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhc--------cCCccEEeecCCCCCHHHHHHHHhcCCeEeecchH
Q 029526 79 --IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSS--------KKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTE 148 (192)
Q Consensus 79 --vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~--------~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~ 148 (192)
||+|||||||+||.|++++|+|||+||++|++.++ ..++|||||||||+|+|+|++||++||+||||+|+
T Consensus 199 ~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Td 278 (349)
T 3elf_A 199 HGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTD 278 (349)
T ss_dssp TSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHHHTTEEEEEECHH
T ss_pred CCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHHHHHHHHcCCEEEEcchH
Confidence 99999999999999985469999999999999873 22699999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-----C-----------C---CChHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 029526 149 VRKAYMDSLSR-----P-----------K---SDLIHLMASAKEAMKAVVAEKMRLFGSSGKA 192 (192)
Q Consensus 149 l~~a~~~~~~~-----~-----------~---~~~~~~~~~~~~~~~~~v~~~i~~~gs~gka 192 (192)
+++||++++++ | + .|||.++++++++|+++|+++|++|||.|+.
T Consensus 279 l~~A~~~~vr~~~~~~~~~~~~~~g~~~n~~~~Dpr~~l~~~~~a~~~~v~~~~~~~gs~~~~ 341 (349)
T 3elf_A 279 TQYAFTRPIAGHMFTNYDGVLKVDGEVGVKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGKS 341 (349)
T ss_dssp HHHHHHHHHHHHHHHTHHHHSCCTTCCCCHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHHHHhCccccccccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999872 2 1 3899999999999999999999999999974
No 8
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=100.00 E-value=9.9e-69 Score=477.38 Aligned_cols=190 Identities=25% Similarity=0.313 Sum_probs=167.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCcccc--ccccCCCHHHHHHHhhhhC-
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVED--YEAKLTDVNQAEEFIDETD- 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~--~~~~~T~peea~~Fv~~Tg- 78 (192)
+++++||||||||||++||||||++||++|++||++|++||+|||+|||.||++.... .+..||||+||++|+++||
T Consensus 130 ~~~~~GFtSVMiDgS~lp~eENI~~Tk~vv~~ah~~gvsVEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~ 209 (357)
T 3qm3_A 130 THGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGK 209 (357)
T ss_dssp HHSSCSCSEEECCCTTSCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccccCCHHHHHHHHHHhCC
Confidence 4567899999999999999999999999999999999999999999999998865322 3568999999999999986
Q ss_pred ---CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhcc-------CCccEEeecCCCCCHHHHHHHHhcCCeEeecchH
Q 029526 79 ---IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSK-------KGVLLVLHGASGLSAELIKGCIERGVRKFNVNTE 148 (192)
Q Consensus 79 ---vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~-------~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~ 148 (192)
+|+|||||||+||.|++++|+|||+||++|++.+++ .++|||||||||+|+|+|++||++||+||||+|+
T Consensus 210 ~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Td 289 (357)
T 3qm3_A 210 ISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKNAVSYGVIKMNIDTD 289 (357)
T ss_dssp TCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCTTCCHHHHHHHHHTTEEEEEECHH
T ss_pred CCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCCCCCHHHHHHHHHCCceEEEechH
Confidence 579999999999999754699999999999886532 2699999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-----C----------------C---CChHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 029526 149 VRKAYMDSLSR-----P----------------K---SDLIHLMASAKEAMKAVVAEKMRLFGSSGK 191 (192)
Q Consensus 149 l~~a~~~~~~~-----~----------------~---~~~~~~~~~~~~~~~~~v~~~i~~~gs~gk 191 (192)
+++||++++++ | + .|||.++.+++++|+++|+++|++|||.||
T Consensus 290 l~~A~~~~vr~~~~~~~~~~~~~~g~p~~~~~~n~~~~Dpr~~l~~~~~a~~~~v~~~~~~~gs~g~ 356 (357)
T 3qm3_A 290 TQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGEESMIKRLEIAFEDLNCINK 356 (357)
T ss_dssp HHHHHHHHHHHHHHHHGGGSSSSEEETTEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHHHHhCchhhhcccCCccccccCCcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999872 2 1 389999999999999999999999999997
No 9
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=100.00 E-value=1.8e-67 Score=469.41 Aligned_cols=188 Identities=27% Similarity=0.340 Sum_probs=170.1
Q ss_pred hhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccc--cccccCCCHHHHHHHhhh-hCCc
Q 029526 4 IVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVE--DYEAKLTDVNQAEEFIDE-TDID 80 (192)
Q Consensus 4 i~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~--~~~~~~T~peea~~Fv~~-TgvD 80 (192)
+++||||||||+|++||||||++||++|++||++|++||+|||+|||.||++... +.+..||||+||++|+++ ||||
T Consensus 134 ~~~gFtSVMiDgS~~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd 213 (358)
T 1dos_A 134 GKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKIS 213 (358)
T ss_dssp SSCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTC
T ss_pred ccCCCceEeecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhcCCC
Confidence 3467999999999999999999999999999999999999999999988876432 124579999999999999 7999
Q ss_pred ---EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhcc------CCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 81 ---ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSK------KGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 81 ---~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~------~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+|||||||+||.|+++.|+|||+||++|++.+++ .++|||||||||+|+|+|++||++||+||||+|++++
T Consensus 214 ~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVlHGgSG~~~e~i~~ai~~GV~KiNi~Tdl~~ 293 (358)
T 1dos_A 214 PRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQW 293 (358)
T ss_dssp SCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred hhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCCCCCHHHHHHHHHCCCeEEEEcHHHHH
Confidence 9999999999999644699999999999996321 3699999999999999999999999999999999999
Q ss_pred HHHHHhcC-----C----------------C---CChHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 029526 152 AYMDSLSR-----P----------------K---SDLIHLMASAKEAMKAVVAEKMRLFGSSGK 191 (192)
Q Consensus 152 a~~~~~~~-----~----------------~---~~~~~~~~~~~~~~~~~v~~~i~~~gs~gk 191 (192)
||++++++ + + .|||.++.+++++|+++++++|++|||.||
T Consensus 294 A~~~~vr~~~~~~~~~~~~~~g~~~~~~~p~~k~~Dpr~~l~~~~~a~~~~v~~~~~~~gs~gk 357 (358)
T 1dos_A 294 ATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDV 357 (358)
T ss_dssp HHHHHHHHHHHHHGGGSSSSEEETTEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHhcchhhhhccCCcccccCcccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999872 2 2 389999999999999999999999999997
No 10
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=100.00 E-value=5.6e-50 Score=362.92 Aligned_cols=182 Identities=14% Similarity=0.134 Sum_probs=159.2
Q ss_pred hhhhcCCCEeEeeCCC------CCHHHHHHH--HHHHHHHHHhCCCe--EEEeccccccCCC----CCccccccccCCCH
Q 029526 2 EAIVLGFDSLMVDGSH------LPFKDNISH--TKYISFLAHSKGML--VEAELGRLSGTED----GLTVEDYEAKLTDV 67 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~------l~~eeNi~~--Tk~vv~~Ah~~gv~--VEaElG~i~g~e~----~~~~~~~~~~~T~p 67 (192)
+||++||||||||+|+ +||+|||.. |+++|++||++ ++ +|+|||+|+|.|. +......+..||||
T Consensus 112 ~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vgG~Ev~v~~~~~~~~~~~~~T~P 190 (420)
T 2fiq_A 112 AYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESV-ATDCQREQLSYVIGTEVPVPGGEASAIQSVHITHV 190 (420)
T ss_dssp HHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEEECSSCC----------CCCCCH
T ss_pred HHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH-cccCCcccceEEeeeecCCCCCcccccCCCCCCCH
Confidence 6999999999999999 999999977 79999999999 88 9999999999883 32211223359999
Q ss_pred HHHHHHhh-------hhCCcE-------EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCcc-EEe--ecCCCCCHH
Q 029526 68 NQAEEFID-------ETDIDA-------LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVL-LVL--HGASGLSAE 130 (192)
Q Consensus 68 eea~~Fv~-------~TgvD~-------LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iP-LVl--HGgSG~~~e 130 (192)
++|++||+ +||||+ |||++||+||.| . .|+|||++|++|++.+ ++| ||| |||||+|++
T Consensus 191 eeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y-~-~~~ld~e~l~~I~~~v---~~P~LVle~HGgSg~~~e 265 (420)
T 2fiq_A 191 EDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHS-N-IIHYQPQEAQALAQWI---ENTRMVYEAHSTDYQTRT 265 (420)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSS-C-EECCCGGGGHHHHHHH---TTSSCEEEESCCTTCCHH
T ss_pred HHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCC-C-CCCcCHHHHHHHHHhc---CCCCEEEecCCCCCCCHH
Confidence 99999999 999999 999999999999 4 6999999999999999 589 999 999999999
Q ss_pred HHHHHHhcCCeEeecchHHHHHHHHHhcC---------CCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 131 LIKGCIERGVRKFNVNTEVRKAYMDSLSR---------PKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 131 ~~~~~i~~Gi~KINi~T~l~~a~~~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
+|+++|+.||+||||+|+++.+|.++++. +..+++.+.....++|++..+.+++.+++.
T Consensus 266 ~l~~~v~~Gi~kiNV~t~l~~a~~~al~~l~~ie~~l~~~~~~~~l~~~~~~~m~~~~~~w~~~~~g~ 333 (420)
T 2fiq_A 266 AYWELVRDHFAILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTG 333 (420)
T ss_dssp HHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHHHHSCTTTCCCHHHHHHHHHHHSGGGTTTTSCSS
T ss_pred HHHHHHHcCCCEEEECHHHHHHHHHHHHHHHHhhhhhccccchhhhHHHHHHHHHHhHHHHHHHhCCC
Confidence 99999999999999999999999998862 223667788888899999888888888764
No 11
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-38 Score=287.30 Aligned_cols=154 Identities=16% Similarity=0.061 Sum_probs=124.3
Q ss_pred ChhhhcCCCEeEeeCCCCCHHHHHH--------HHHHHHHHHHhCCCeE-EEeccccccCCCCCc----cccccccCCCH
Q 029526 1 MEAIVLGFDSLMVDGSHLPFKDNIS--------HTKYISFLAHSKGMLV-EAELGRLSGTEDGLT----VEDYEAKLTDV 67 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l~~eeNi~--------~Tk~vv~~Ah~~gv~V-EaElG~i~g~e~~~~----~~~~~~~~T~p 67 (192)
++||++||||||||+|++||||||+ +|++++++||+.++++ ..|+|.++|.|+++. ....+..||+|
T Consensus 118 ~~aI~AGFtSVMiD~S~~p~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~~~~T~P 197 (450)
T 3txv_A 118 TAYAKAGFTKLHLDTSMGCAGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDTLEVTAP 197 (450)
T ss_dssp HHHHTTTCCEEEECCCBCCSSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC-------------CCCCCH
T ss_pred HHHHHcCCCEEEECCCCCchhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccccccCCCCCH
Confidence 3799999999999999999999985 4555559999976555 225666666555321 11223469999
Q ss_pred HHHHHHhhh-------hCCc-------EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCcc-EEeecCC--CCCHH
Q 029526 68 NQAEEFIDE-------TDID-------ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVL-LVLHGAS--GLSAE 130 (192)
Q Consensus 68 eea~~Fv~~-------TgvD-------~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iP-LVlHGgS--G~~~e 130 (192)
++|++|++. +|+| +|+|++||.|| ++. .|++||++|++|++.++ ++| |||||+| |+|++
T Consensus 198 eeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~-~~~-v~~y~~e~~~~L~~~v~--~~P~LVlhghStDy~~~e 273 (450)
T 3txv_A 198 EAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFG-NEN-VIAYDRARAEKLSATLG--QLHGMVFEAHSTDYQTPD 273 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEEC-SSC-EECCCTTTTSHHHHGGG--TSTTCEEEESCCTTCCHH
T ss_pred HHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccC-CCC-CCCCCHHHHHHHHHHhc--cCCCEEEecCCCCCCCHH
Confidence 999999984 8998 99999999998 554 69999999999999985 699 9999999 99999
Q ss_pred HHHHHHhcCCeEeecchHHHHHHHHHhc
Q 029526 131 LIKGCIERGVRKFNVNTEVRKAYMDSLS 158 (192)
Q Consensus 131 ~~~~~i~~Gi~KINi~T~l~~a~~~~~~ 158 (192)
+|+++++.||+|+||+|+|..++.+++.
T Consensus 274 ~l~~~V~~GiaklNVgp~Lt~a~reAl~ 301 (450)
T 3txv_A 274 ALRELVADGFAILKVGPGLTFALREALY 301 (450)
T ss_dssp HHHHHHHTTEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEEChHHHHHHHHHHH
Confidence 9999999999999999999999999874
No 12
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=99.86 E-value=2e-21 Score=168.55 Aligned_cols=129 Identities=14% Similarity=0.096 Sum_probs=117.0
Q ss_pred hhhhcCCCEeEe-eCCC---------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMV-DGSH---------LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~-D~S~---------l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+|+++|+++||| |+|+ .+++||++.+++++++||++|+.||+||+.+.+.+++ .+|+|+++.
T Consensus 91 ~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~--------~~~~~~~~~ 162 (302)
T 2ftp_A 91 AALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD--------GDVDPRQVA 162 (302)
T ss_dssp HHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT--------BCCCHHHHH
T ss_pred HHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC--------CCCCHHHHH
Confidence 689999999997 8775 7999999999999999999999999999999776652 379999999
Q ss_pred HHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEeec
Q 029526 72 EFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 72 ~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KINi 145 (192)
+|++ ++|+|.|+++ +.||.- .|...++++++|++.+. ++||++|| ++|++..+..+|++.|+++||.
T Consensus 163 ~~~~~~~~~G~d~i~l~--DT~G~~---~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~ 234 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLG--DTIGVG---TAGATRRLIEAVASEVP--RERLAGHFHDTYGQALANIYASLLEGIAVFDS 234 (302)
T ss_dssp HHHHHHHHTTCSEEEEE--ESSSCC---CHHHHHHHHHHHTTTSC--GGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEEe--CCCCCc---CHHHHHHHHHHHHHhCC--CCeEEEEeCCCccHHHHHHHHHHHhCCCEEEe
Confidence 9998 8999998887 999972 49999999999998873 49999999 9999999999999999999975
No 13
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=99.85 E-value=4.3e-21 Score=165.38 Aligned_cols=130 Identities=15% Similarity=0.185 Sum_probs=118.1
Q ss_pred hhhhcCCCEeEee--CC--------CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMVD--GS--------HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D--~S--------~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+|+++|+++|||+ +| ..+++||++.+++++++||++|+.||++|+.+.+.++. ..|+|+++.
T Consensus 87 ~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~--------~~~~~~~~~ 158 (295)
T 1ydn_A 87 AAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYD--------GPVTPQAVA 158 (295)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTT--------EECCHHHHH
T ss_pred HHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcC--------CCCCHHHHH
Confidence 6899999999999 77 88999999999999999999999999999998776653 469999999
Q ss_pred HHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEeecc
Q 029526 72 EFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 72 ~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
+|++ ++|+|.|+++ +.||.- .|...++++++|++.++ ++||++|| ++|++..+..+|++.|+++||+.
T Consensus 159 ~~~~~~~~~G~d~i~l~--Dt~G~~---~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~s 231 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLG--DTIGRG---TPDTVAAMLDAVLAIAP--AHSLAGHYHDTGGRALDNIRVSLEKGLRVFDAS 231 (295)
T ss_dssp HHHHHHHHHTCSEEEEE--ETTSCC---CHHHHHHHHHHHHTTSC--GGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHhcCCCEEEec--CCCCCc---CHHHHHHHHHHHHHhCC--CCeEEEEECCCcchHHHHHHHHHHhCCCEEEec
Confidence 9999 8999998887 899973 49999999999998873 39999999 99999999999999999999873
No 14
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.46 E-value=3e-12 Score=107.98 Aligned_cols=127 Identities=21% Similarity=0.213 Sum_probs=101.6
Q ss_pred hhhhcCCCEe---EeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhC
Q 029526 2 EAIVLGFDSL---MVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETD 78 (192)
Q Consensus 2 ~ai~~GFtSV---M~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tg 78 (192)
+|+++|+++| |++++. +.+++++.++++++.||++|+.|..|++.- |. ... .. ..-++++++.+++.+.|
T Consensus 107 ~a~~~Ga~~v~~~l~~~~~-~~~~~~~~~~~v~~~~~~~g~~viv~~~~~-G~--~l~-~~--~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 107 EAIRMGADAVSIHVNVGSD-EDWEAYRDLGMIAETCEYWGMPLIAMMYPR-GK--HIQ-NE--RDPELVAHAARLGAELG 179 (273)
T ss_dssp HHHHTTCSEEEEEEEETST-THHHHHHHHHHHHHHHHHHTCCEEEEEEEC-ST--TCS-CT--TCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEEEecCCC-CHHHHHHHHHHHHHHHHHcCCCEEEEeCCC-Cc--ccC-CC--CCHhHHHHHHHHHHHcC
Confidence 6899999999 778865 999999999999999999999999987521 21 110 00 00134577778899999
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHH----HHHHHhcCCeEeecchHHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AEL----IKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~----~~~~i~~Gi~KINi~T~l~ 150 (192)
+|++.++ | .++++++++|.+.+ ++|++.|||.+.+ +++ ++++++.|+..|++++.+.
T Consensus 180 ad~i~~~-------~-----~~~~~~l~~i~~~~---~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~ 241 (273)
T 2qjg_A 180 ADIVKTS-------Y-----TGDIDSFRDVVKGC---PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIF 241 (273)
T ss_dssp CSEEEEC-------C-----CSSHHHHHHHHHHC---SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHH
T ss_pred CCEEEEC-------C-----CCCHHHHHHHHHhC---CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhh
Confidence 9999986 2 15899999999887 6999999999986 666 7777899999999999885
No 15
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.70 E-value=7.7e-07 Score=76.47 Aligned_cols=128 Identities=14% Similarity=0.127 Sum_probs=102.3
Q ss_pred hhhhcCCCEeEeeCCCC----------CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHL----------PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l----------~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+|+++|.+.|.+-.|.- +.+||++..++++++|+++|..|++.+...-+.++. ..++|+.+.
T Consensus 88 ~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~--------~~~~~~~~~ 159 (298)
T 2cw6_A 88 AAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYE--------GKISPAKVA 159 (298)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTT--------BSCCHHHHH
T ss_pred HHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC--------CCCCHHHHH
Confidence 68899999998776654 679999999999999999999999998866455542 358898887
Q ss_pred HHh---hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEee
Q 029526 72 EFI---DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 72 ~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KIN 144 (192)
+++ .+.|+|.+.++ ...|.- .|.-=.++++.+++.++ ++||-+|+ ..|+.-...-.|++.|+..|+
T Consensus 160 ~~~~~~~~~Ga~~i~l~--DT~G~~---~P~~~~~lv~~l~~~~~--~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd 230 (298)
T 2cw6_A 160 EVTKKFYSMGCYEISLG--DTIGVG---TPGIMKDMLSAVMQEVP--LAALAVHCHDTYGQALANTLMALQMGVSVVD 230 (298)
T ss_dssp HHHHHHHHTTCSEEEEE--ETTSCC---CHHHHHHHHHHHHHHSC--GGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCEEEec--CCCCCc---CHHHHHHHHHHHHHhCC--CCeEEEEECCCCchHHHHHHHHHHhCCCEEE
Confidence 776 46799987665 555643 36666788888888773 48899888 899999999999999999874
No 16
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=98.61 E-value=2.7e-07 Score=80.10 Aligned_cols=153 Identities=19% Similarity=0.194 Sum_probs=116.2
Q ss_pred hhhhcCCCEeEeeCCCC----------CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHL----------PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l----------~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+|+++|.+.|.+-.|.- +.+||++..++++++|++.|..|++.|...-+.++. ..++|+.+.
T Consensus 89 ~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~--------~~~~~~~~~ 160 (307)
T 1ydo_A 89 NALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYE--------KDVPIEQVI 160 (307)
T ss_dssp HHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT--------BCCCHHHHH
T ss_pred HHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcC--------CCCCHHHHH
Confidence 68899999999776664 479999999999999999999999998887555542 258999988
Q ss_pred HHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEe---
Q 029526 72 EFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKF--- 143 (192)
Q Consensus 72 ~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KI--- 143 (192)
++++ +.|+|.+.++ ...|.- .|.-=.++++.+++.+. ++||.+|+ ..|+.-...-.|++.|+..|
T Consensus 161 ~~~~~~~~~Ga~~i~l~--DT~G~~---~P~~v~~lv~~l~~~~~--~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~t 233 (307)
T 1ydo_A 161 RLSEALFEFGISELSLG--DTIGAA---NPAQVETVLEALLARFP--ANQIALHFHDTRGTALANMVTALQMGITVFDGS 233 (307)
T ss_dssp HHHHHHHHHTCSCEEEE--CSSCCC---CHHHHHHHHHHHHTTSC--GGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHhcCCCEEEEc--CCCCCc---CHHHHHHHHHHHHHhCC--CCeEEEEECCCCchHHHHHHHHHHhCCCEEEEc
Confidence 8874 6899976655 556643 36666778888887763 48999999 99999999999999999876
Q ss_pred ---------------ecchHHHHHHHHHhc-CCCCChHHHHH
Q 029526 144 ---------------NVNTEVRKAYMDSLS-RPKSDLIHLMA 169 (192)
Q Consensus 144 ---------------Ni~T~l~~a~~~~~~-~~~~~~~~~~~ 169 (192)
|..|+-...+...+. +...|+..+.+
T Consensus 234 v~GlGecp~a~graGN~~~E~lv~~L~~~g~~t~idl~~L~~ 275 (307)
T 1ydo_A 234 AGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLS 275 (307)
T ss_dssp GGGCCEETTEEEEECBCBHHHHHHHHHHTTCBCCCCHHHHHH
T ss_pred ccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHH
Confidence 555665555555442 23345554433
No 17
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.83 E-value=0.00048 Score=59.91 Aligned_cols=134 Identities=12% Similarity=0.144 Sum_probs=94.1
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDY 60 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~ 60 (192)
+|.++||+-|-+.+.+ -+++...+...++++-.++. ++.|-.-|..-...++
T Consensus 152 ~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~------- 224 (338)
T 1z41_A 152 RAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDK------- 224 (338)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTT-------
T ss_pred HHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCC-------
Confidence 6789999999998864 14677888888888877753 4444443332110111
Q ss_pred cccCCCHHHHHHH---hhhhCCcEEEEecCcCCCC-CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 61 EAKLTDVNQAEEF---IDETDIDALAVCIGNVHGK-YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 61 ~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~-y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
. .+++++.+| +++.|+|+|-++-|+.+.. ++. .|..+++.+++|++.+ ++|++.=||-- +.++..+++
T Consensus 225 --g-~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~~~~ir~~~---~iPVi~~Ggi~-s~~~a~~~l 296 (338)
T 1z41_A 225 --G-LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINV-FPGYQVSFAEKIREQA---DMATGAVGMIT-DGSMAEEIL 296 (338)
T ss_dssp --S-CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH---CCEEEECSSCC-SHHHHHHHH
T ss_pred --C-CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCC-CccchHHHHHHHHHHC---CCCEEEECCCC-CHHHHHHHH
Confidence 1 234555555 4568999999999986532 222 3567889999999988 69998877543 568899999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.-|-+++.+.
T Consensus 297 ~~G~aD~V~iGR~~i 311 (338)
T 1z41_A 297 QNGRADLIFIGRELL 311 (338)
T ss_dssp HTTSCSEEEECHHHH
T ss_pred HcCCceEEeecHHHH
Confidence 999 99999999874
No 18
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.68 E-value=0.0018 Score=56.52 Aligned_cols=137 Identities=11% Similarity=0.063 Sum_probs=96.1
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDY 60 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~ 60 (192)
+|.++||+-|-+-+++ -++|...+...|+++-.++. +..|-.=|. ..+ ... .
T Consensus 152 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls---~~~-~~~---~ 224 (340)
T 3gr7_A 152 RAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRIS---ASD-YHP---D 224 (340)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEE---SCC-CST---T
T ss_pred HHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEec---ccc-ccC---C
Confidence 6889999999999885 14777888888888877753 444443332 211 110 0
Q ss_pred cccCCCHHHHHHHhhhhCCcEEEEecCcCCCC-CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC
Q 029526 61 EAKLTDVNQAEEFIDETDIDALAVCIGNVHGK-YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG 139 (192)
Q Consensus 61 ~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~-y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G 139 (192)
.....++.+..+-+++.|+|+|-++-|..... ++. .|..+++.+++|++.+ ++|++.=||-. +.++..++++.|
T Consensus 225 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~-~~~~~~~~~~~ik~~~---~iPVi~~GgI~-s~e~a~~~L~~G 299 (340)
T 3gr7_A 225 GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNV-YPGYQVPFAELIRREA---DIPTGAVGLIT-SGWQAEEILQNG 299 (340)
T ss_dssp SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHT---TCCEEEESSCC-CHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCC-CccccHHHHHHHHHHc---CCcEEeeCCCC-CHHHHHHHHHCC
Confidence 11234555656667788999999998875542 111 3667899999999988 69998888543 567799999999
Q ss_pred -CeEeecchHHH
Q 029526 140 -VRKFNVNTEVR 150 (192)
Q Consensus 140 -i~KINi~T~l~ 150 (192)
+.-|-+++.+.
T Consensus 300 ~aD~V~iGR~~l 311 (340)
T 3gr7_A 300 RADLVFLGRELL 311 (340)
T ss_dssp SCSEEEECHHHH
T ss_pred CeeEEEecHHHH
Confidence 89999998874
No 19
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.57 E-value=0.0055 Score=52.88 Aligned_cols=147 Identities=13% Similarity=0.154 Sum_probs=100.9
Q ss_pred hhhhcCCCEeEeeCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHH---HHHHhhh
Q 029526 2 EAIVLGFDSLMVDGS--HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQ---AEEFIDE 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S--~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pee---a~~Fv~~ 76 (192)
+|+++|.+-|-+..- .-+..+.++..+++++.||++|+.|=.|. ..|.. ..+||+- +.+...+
T Consensus 133 ~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~-~~G~~-----------~~~d~e~i~~aariA~e 200 (295)
T 3glc_A 133 DAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVT-GVGKD-----------MVRDQRYFSLATRIAAE 200 (295)
T ss_dssp HHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEE-CC---------------CCSHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEEC-CCCCc-----------cCCCHHHHHHHHHHHHH
Confidence 689999887765533 56788999999999999999999887775 22211 2366653 5577788
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHH----HHHHHHhcCCeEeecchHHHHH
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAE----LIKGCIERGVRKFNVNTEVRKA 152 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e----~~~~~i~~Gi~KINi~T~l~~a 152 (192)
.|.|++-++ |++ +.++++.+.+ ++|+|+=||.-.+++ .++.+++.|..=+=+++.+.++
T Consensus 201 lGAD~VKt~-------~t~-------e~~~~vv~~~---~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 201 MGAQIIKTY-------YVE-------KGFERIVAGC---PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp TTCSEEEEE-------CCT-------TTHHHHHHTC---SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred hCCCEEEeC-------CCH-------HHHHHHHHhC---CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 999999887 542 2366777666 699999999887774 4566779999988888776522
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHH--HHHHHHHHh
Q 029526 153 YMDSLSRPKSDLIHLMASAKEAMKA--VVAEKMRLF 186 (192)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~i~~~ 186 (192)
.+|..+.+.....+.+ .+++.++++
T Consensus 264 ---------~dp~~~~~al~~ivh~~~s~~eA~~~~ 290 (295)
T 3glc_A 264 ---------DHPVAMMKAVQAVVHHNETADRAYELY 290 (295)
T ss_dssp ---------SSHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred ---------cCHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 2555555544444433 245555554
No 20
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.54 E-value=0.0021 Score=53.22 Aligned_cols=119 Identities=17% Similarity=0.241 Sum_probs=86.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++++|-+-|.+|++...-. ...+++++.+|+.|+.+=++ .++++++++ +.+.|+|.
T Consensus 96 ~~~~aGad~I~l~~~~~~~p---~~l~~~i~~~~~~g~~v~~~-------------------v~t~eea~~-a~~~Gad~ 152 (229)
T 3q58_A 96 ALAQAGADIIAFDASFRSRP---VDIDSLLTRIRLHGLLAMAD-------------------CSTVNEGIS-CHQKGIEF 152 (229)
T ss_dssp HHHHHTCSEEEEECCSSCCS---SCHHHHHHHHHHTTCEEEEE-------------------CSSHHHHHH-HHHTTCSE
T ss_pred HHHHcCCCEEEECccccCCh---HHHHHHHHHHHHCCCEEEEe-------------------cCCHHHHHH-HHhCCCCE
Confidence 47889999999999974111 24567888888887665543 246788877 55789998
Q ss_pred EEEecCcCCCCCCC-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 82 LAVCIGNVHGKYPS-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 82 LAvaiGt~HG~y~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+.+ |.||.... .....++++++++.+. ++|++-=||-. +.++++++.++|..=+=++|.+..
T Consensus 153 Ig~---~~~g~t~~~~~~~~~~~li~~l~~~----~ipvIA~GGI~-t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 153 IGT---TLSGYTGPITPVEPDLAMVTQLSHA----GCRVIAEGRYN-TPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp EEC---TTTTSSSSCCCSSCCHHHHHHHHTT----TCCEEEESSCC-SHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEe---cCccCCCCCcCCCCCHHHHHHHHHc----CCCEEEECCCC-CHHHHHHHHHcCCCEEEEchHhcC
Confidence 855 45653211 0133489999999865 49999777443 367799999999999999998863
No 21
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.53 E-value=0.0024 Score=52.99 Aligned_cols=118 Identities=19% Similarity=0.248 Sum_probs=85.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++++|-+-|.+|++...-. ...+++++.+|+.|+.+=++ .++++++++ +.+.|+|.
T Consensus 96 ~~~~~Gad~V~l~~~~~~~p---~~l~~~i~~~~~~g~~v~~~-------------------v~t~eea~~-a~~~Gad~ 152 (232)
T 3igs_A 96 ALAQAGAAIIAVDGTARQRP---VAVEALLARIHHHHLLTMAD-------------------CSSVDDGLA-CQRLGADI 152 (232)
T ss_dssp HHHHHTCSEEEEECCSSCCS---SCHHHHHHHHHHTTCEEEEE-------------------CCSHHHHHH-HHHTTCSE
T ss_pred HHHHcCCCEEEECccccCCH---HHHHHHHHHHHHCCCEEEEe-------------------CCCHHHHHH-HHhCCCCE
Confidence 57889999999999974211 24567888888887665443 246788877 45789998
Q ss_pred EEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHHH
Q 029526 82 LAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+.+ |.||..... ....++++++++++. ++|++-=| |+ +.++++++.++|..=+-++|.+..
T Consensus 153 Ig~---~~~g~t~~~~~~~~~~~~i~~l~~~----~ipvIA~G--GI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 153 IGT---TMSGYTTPDTPEEPDLPLVKALHDA----GCRVIAEG--RYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp EEC---TTTTSSSSSCCSSCCHHHHHHHHHT----TCCEEEES--CCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEE---cCccCCCCCCCCCCCHHHHHHHHhc----CCcEEEEC--CCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 865 455532210 134589999999875 49999666 55 467899999999999999998863
No 22
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.51 E-value=0.002 Score=56.27 Aligned_cols=135 Identities=11% Similarity=0.132 Sum_probs=94.0
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVE 58 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~ 58 (192)
+|.++||+-|-+.+++ -++|...+...|+++-.++. +..|-.-|..- + ...
T Consensus 160 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~---~-~~~-- 233 (349)
T 3hgj_A 160 RALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSAT---D-WGE-- 233 (349)
T ss_dssp HHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESC---C-CST--
T ss_pred HHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccc---c-ccC--
Confidence 6889999999999987 15788889999999888763 23333322211 1 100
Q ss_pred cccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCC-CCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHH
Q 029526 59 DYEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYP-SSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKG 134 (192)
Q Consensus 59 ~~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~-~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~ 134 (192)
.-.+++++.++ +++.|+|+|-++.|....... +..|..+++.+++|++.+ ++|++.=|+-. +.++..+
T Consensus 234 ----~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~Ggi~-t~e~a~~ 305 (349)
T 3hgj_A 234 ----GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV---GLRTGAVGLIT-TPEQAET 305 (349)
T ss_dssp ----TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH---CCEEEECSSCC-CHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc---CceEEEECCCC-CHHHHHH
Confidence 01245555555 456799999999886654311 112567889999999988 69998877543 5678999
Q ss_pred HHhcC-CeEeecchHHH
Q 029526 135 CIERG-VRKFNVNTEVR 150 (192)
Q Consensus 135 ~i~~G-i~KINi~T~l~ 150 (192)
+++.| +.-|-+++.+.
T Consensus 306 ~l~~G~aD~V~iGR~~l 322 (349)
T 3hgj_A 306 LLQAGSADLVLLGRVLL 322 (349)
T ss_dssp HHHTTSCSEEEESTHHH
T ss_pred HHHCCCceEEEecHHHH
Confidence 99999 88999998874
No 23
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.28 E-value=0.019 Score=49.45 Aligned_cols=136 Identities=15% Similarity=0.069 Sum_probs=91.8
Q ss_pred hhhhcCCCEeE----eeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccC-CCHHHHHHHhhh
Q 029526 2 EAIVLGFDSLM----VDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKL-TDVNQAEEFIDE 76 (192)
Q Consensus 2 ~ai~~GFtSVM----~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~-T~peea~~Fv~~ 76 (192)
+|+++|.+-|- ++ |..|-.+.++..+++++.|+++|+.+=.|+.--|.. ..+ +... ..+.++.+-..+
T Consensus 116 ~a~~~GAdaV~vlv~~~-~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~---v~~---~~~~~~~v~~aa~~a~~ 188 (304)
T 1to3_A 116 AVKRDGAKALKLLVLWR-SDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPR---CGD---KFDREQAIIDAAKELGD 188 (304)
T ss_dssp HHHHTTCCEEEEEEEEC-TTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCS---SCS---CCCHHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEEEEcC-CCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCc---ccc---CCChhHHHHHHHHHHHH
Confidence 68899999887 77 777789999999999999999999988886533211 100 0000 123553333446
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhcc-CCcc-EEeecCCCCCH--HHHHHHHhcCCeEeecchHHHHH
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSK-KGVL-LVLHGASGLSA--ELIKGCIERGVRKFNVNTEVRKA 152 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~-~~iP-LVlHGgSG~~~--e~~~~~i~~Gi~KINi~T~l~~a 152 (192)
.|+|+|-+-.+.. | + . +++.++++-+.... .++| +|+=||....+ +.++.+++.|+.=+=++..+..+
T Consensus 189 lGaD~iKv~~~~~-~-~----g--~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 189 SGADLYKVEMPLY-G-K----G--ARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp SSCSEEEECCGGG-G-C----S--CHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred cCCCEEEeCCCcC-C-C----C--CHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 8999998876422 1 1 1 55666665555111 2699 99999883322 56899999999888888777543
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.23 E-value=0.0093 Score=47.48 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=82.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCH-HHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDV-NQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~p-eea~~Fv~~TgvD 80 (192)
+|+++|.+.|.+-.. +.++++ .++++.|+++|+.+-.|+=. .++| +.+++ +.+.|+|
T Consensus 72 ~~~~~Gad~v~v~~~--~~~~~~---~~~~~~~~~~g~~~~v~~~~----------------~~t~~~~~~~-~~~~g~d 129 (211)
T 3f4w_A 72 LLFDAGADYVTVLGV--TDVLTI---QSCIRAAKEAGKQVVVDMIC----------------VDDLPARVRL-LEEAGAD 129 (211)
T ss_dssp HHHHTTCSEEEEETT--SCHHHH---HHHHHHHHHHTCEEEEECTT----------------CSSHHHHHHH-HHHHTCC
T ss_pred HHHhcCCCEEEEeCC--CChhHH---HHHHHHHHHcCCeEEEEecC----------------CCCHHHHHHH-HHHcCCC
Confidence 588999999999655 345544 57788888888877654211 1345 44555 5578999
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
.+.+..|.. |. +. +.-.++.+++|++... ++|++.=||- ..++++++++.|+.-+=++|.+.
T Consensus 130 ~i~v~~g~~-g~-~~--~~~~~~~i~~l~~~~~--~~~i~~~gGI--~~~~~~~~~~~Gad~vvvGsai~ 191 (211)
T 3f4w_A 130 MLAVHTGTD-QQ-AA--GRKPIDDLITMLKVRR--KARIAVAGGI--SSQTVKDYALLGPDVVIVGSAIT 191 (211)
T ss_dssp EEEEECCHH-HH-HT--TCCSHHHHHHHHHHCS--SCEEEEESSC--CTTTHHHHHTTCCSEEEECHHHH
T ss_pred EEEEcCCCc-cc-cc--CCCCHHHHHHHHHHcC--CCcEEEECCC--CHHHHHHHHHcCCCEEEECHHHc
Confidence 987654311 11 11 1126888999988753 5899887754 57899999999999999999875
No 25
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.11 E-value=0.0096 Score=52.28 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=93.0
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVE 58 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~ 58 (192)
+|.++||+-|-+.+.+ -++|...+...|+++-.++. +..|-.=|.. . +....
T Consensus 166 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~---~-~~~~~- 240 (363)
T 3l5l_A 166 RARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGV---L-EYDGR- 240 (363)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEE---E-CSSSC-
T ss_pred HHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecc---h-hcCCC-
Confidence 6889999999999864 14777788999999988864 2223222221 1 11000
Q ss_pred cccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCC-CCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHH
Q 029526 59 DYEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYP-SSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKG 134 (192)
Q Consensus 59 ~~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~-~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~ 134 (192)
..-+++++.++ +++.|+|+|-++.|+...... ...|..+.+.++.|++.+ ++|++.=|+-. +.++..+
T Consensus 241 ----G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~GgI~-s~e~a~~ 312 (363)
T 3l5l_A 241 ----DEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA---KLPVTSAWGFG-TPQLAEA 312 (363)
T ss_dssp ----HHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---TCCEEECSSTT-SHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc---CCcEEEeCCCC-CHHHHHH
Confidence 00124554444 556899999999987654321 113567889999999988 69998777532 5788999
Q ss_pred HHhcC-CeEeecchHHH
Q 029526 135 CIERG-VRKFNVNTEVR 150 (192)
Q Consensus 135 ~i~~G-i~KINi~T~l~ 150 (192)
+++.| +.-|-+++.+.
T Consensus 313 ~l~~G~aD~V~iGR~~l 329 (363)
T 3l5l_A 313 ALQANQLDLVSVGRAHL 329 (363)
T ss_dssp HHHTTSCSEEECCHHHH
T ss_pred HHHCCCccEEEecHHHH
Confidence 99999 88999998874
No 26
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.10 E-value=0.0091 Score=50.75 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=85.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|..+|.+-|.+=.+.+|.++ .+++++.||.+|+.+=.| -++++|+++- .+.|+|.
T Consensus 130 ~A~~~GAD~VlLi~a~l~~~~----l~~l~~~a~~lGl~~lve-------------------v~t~ee~~~A-~~~Gad~ 185 (272)
T 3qja_A 130 EARAHGADMLLLIVAALEQSV----LVSMLDRTESLGMTALVE-------------------VHTEQEADRA-LKAGAKV 185 (272)
T ss_dssp HHHHTTCSEEEEEGGGSCHHH----HHHHHHHHHHTTCEEEEE-------------------ESSHHHHHHH-HHHTCSE
T ss_pred HHHHcCCCEEEEecccCCHHH----HHHHHHHHHHCCCcEEEE-------------------cCCHHHHHHH-HHCCCCE
Confidence 577899999988555677543 578899999998876222 2567777654 4679999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+.+. + .... ....|++.+++|.+.+.. ++|+|- +||+. .++++++.++|+.=+=|++.+.
T Consensus 186 IGv~--~---r~l~-~~~~dl~~~~~l~~~v~~-~~pvVa--egGI~t~edv~~l~~~GadgvlVGsal~ 246 (272)
T 3qja_A 186 IGVN--A---RDLM-TLDVDRDCFARIAPGLPS-SVIRIA--ESGVRGTADLLAYAGAGADAVLVGEGLV 246 (272)
T ss_dssp EEEE--S---BCTT-TCCBCTTHHHHHGGGSCT-TSEEEE--ESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred EEEC--C---Cccc-ccccCHHHHHHHHHhCcc-cCEEEE--ECCCCCHHHHHHHHHcCCCEEEEcHHHh
Confidence 8876 2 1111 244678888888876631 488887 55776 8899999999999999999884
No 27
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=97.07 E-value=0.0066 Score=52.43 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=77.1
Q ss_pred hhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEE
Q 029526 3 AIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDAL 82 (192)
Q Consensus 3 ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~L 82 (192)
|+++|++-|-+-+. .| .++++..++.|+.|=. ..+++++|+. +.+.|+|.+
T Consensus 84 a~~~g~d~V~~~~g-~p--------~~~i~~l~~~g~~v~~-------------------~v~~~~~a~~-~~~~GaD~i 134 (332)
T 2z6i_A 84 VIEEGVKVVTTGAG-NP--------SKYMERFHEAGIIVIP-------------------VVPSVALAKR-MEKIGADAV 134 (332)
T ss_dssp HHHTTCSEEEECSS-CG--------GGTHHHHHHTTCEEEE-------------------EESSHHHHHH-HHHTTCSCE
T ss_pred HHHCCCCEEEECCC-Ch--------HHHHHHHHHcCCeEEE-------------------EeCCHHHHHH-HHHcCCCEE
Confidence 55667776666554 23 2344555555544321 1367788876 457899999
Q ss_pred EEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 83 AVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 83 AvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
-+. |...|.+.+ ...+++++++|++.+ ++|++.=||-.. .+++.+++..|..=|-++|.+..
T Consensus 135 ~v~-g~~~GG~~g--~~~~~~ll~~i~~~~---~iPViaaGGI~~-~~~~~~al~~GAdgV~vGs~~l~ 196 (332)
T 2z6i_A 135 IAE-GMEAGGHIG--KLTTMTLVRQVATAI---SIPVIAAGGIAD-GEGAAAGFMLGAEAVQVGTRFVV 196 (332)
T ss_dssp EEE-CTTSSEECC--SSCHHHHHHHHHHHC---SSCEEEESSCCS-HHHHHHHHHTTCSEEEECHHHHT
T ss_pred EEE-CCCCCCCCC--CccHHHHHHHHHHhc---CCCEEEECCCCC-HHHHHHHHHcCCCEEEecHHHhc
Confidence 984 433454432 345789999999887 699999886554 57799999999999999998843
No 28
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.90 E-value=0.01 Score=52.49 Aligned_cols=133 Identities=13% Similarity=0.031 Sum_probs=87.6
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|+++||+-|-+.+++ -+++...+...||++-.++. |- .|-.-|..-...+ +. .
T Consensus 174 ~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~-~~---~ 249 (377)
T 2r14_A 174 RAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF-GL---T 249 (377)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT-TC---C
T ss_pred HHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC-CC---C
Confidence 6789999999998765 14788888999998888752 21 2322222110000 00 0
Q ss_pred ccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 60 YEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 60 ~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
.-.+++++.+| +++.|+|+|.++-|+.++.++. . +++.+++|++.+ ++|++.=|+- ..++..+++
T Consensus 250 ---~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~--~--~~~~~~~ik~~~---~iPvi~~Ggi--~~~~a~~~l 317 (377)
T 2r14_A 250 ---DDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT--Y--PEGFREQMRQRF---KGGLIYCGNY--DAGRAQARL 317 (377)
T ss_dssp ---CSCHHHHHHHHHHHHHHTTCSEEEEECCC------C--C--CTTHHHHHHHHC---CSEEEEESSC--CHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc--c--hHHHHHHHHHHC---CCCEEEECCC--CHHHHHHHH
Confidence 01234555555 4568999999999886654432 2 566788999888 6999988865 589999999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.=|=++..+.
T Consensus 318 ~~g~aD~V~igR~~l 332 (377)
T 2r14_A 318 DDNTADAVAFGRPFI 332 (377)
T ss_dssp HTTSCSEEEESHHHH
T ss_pred HCCCceEEeecHHHH
Confidence 998 88888888764
No 29
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.88 E-value=0.017 Score=50.78 Aligned_cols=132 Identities=14% Similarity=0.166 Sum_probs=89.3
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|.++||+-|=+.+.+ -+++...+...++++-.++. |- .|-.= |...+. ...
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vr---is~~~~-~~~-- 242 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVR---LAPLTT-LNG-- 242 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEE---ECSSCC-TTS--
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEE---Eccccc-cCC--
Confidence 5789999999998865 14777888888888877752 21 12111 111110 000
Q ss_pred ccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 60 YEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 60 ~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
.. .-.+++++.+| +++.|+|+|.++-|+..+ .|...++.+++|++.+ ++|++.=|+- +.++..+++
T Consensus 243 ~~-~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-----~~~~~~~~~~~i~~~~---~iPvi~~Ggi--~~~~a~~~l 311 (365)
T 2gou_A 243 TV-DADPILTYTAAAALLNKHRIVYLHIAEVDWDD-----APDTPVSFKRALREAY---QGVLIYAGRY--NAEKAEQAI 311 (365)
T ss_dssp CC-CSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB-----CCCCCHHHHHHHHHHC---CSEEEEESSC--CHHHHHHHH
T ss_pred CC-CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC-----CCCccHHHHHHHHHHC---CCcEEEeCCC--CHHHHHHHH
Confidence 00 01234565555 456899999999887543 2334578889999988 6999988875 788999999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.=|=+++.+.
T Consensus 312 ~~g~aD~V~igR~~i 326 (365)
T 2gou_A 312 NDGLADMIGFGRPFI 326 (365)
T ss_dssp HTTSCSEEECCHHHH
T ss_pred HCCCcceehhcHHHH
Confidence 998 88888888774
No 30
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.86 E-value=0.01 Score=47.65 Aligned_cols=119 Identities=14% Similarity=0.227 Sum_probs=77.8
Q ss_pred hhhhcCCCEeEeeCCCCCHH-HHHHHHHHHHHHHHhC--CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFK-DNISHTKYISFLAHSK--GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~e-eNi~~Tk~vv~~Ah~~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tg 78 (192)
.++++|.+.|.++...++-. +. ..++++.+++. |..+=. ...+|+++++ +.+.|
T Consensus 83 ~~~~~Gad~v~l~~~~~~~p~~~---~~~~i~~~~~~~~~~~v~~-------------------~~~t~~e~~~-~~~~G 139 (223)
T 1y0e_A 83 ELIESQCEVIALDATLQQRPKET---LDELVSYIRTHAPNVEIMA-------------------DIATVEEAKN-AARLG 139 (223)
T ss_dssp HHHHHTCSEEEEECSCSCCSSSC---HHHHHHHHHHHCTTSEEEE-------------------ECSSHHHHHH-HHHTT
T ss_pred HHHhCCCCEEEEeeecccCcccC---HHHHHHHHHHhCCCceEEe-------------------cCCCHHHHHH-HHHcC
Confidence 35677888888877664211 11 23566666654 555411 1246888877 66889
Q ss_pred CcEEEEecCcCCCCCCCC--C--CCCCHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHHH
Q 029526 79 IDALAVCIGNVHGKYPSS--G--PNLKLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~--~--p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+|++-++. ||..... . ...+++.++++++.+ ++|++-=| |+ +.+++.++.+.|..=+=++|.+..
T Consensus 140 ~d~i~~~~---~g~t~~~~~~~~~~~~~~~~~~~~~~~---~ipvia~G--GI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 140 FDYIGTTL---HGYTSYTQGQLLYQNDFQFLKDVLQSV---DAKVIAEG--NVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp CSEEECTT---TTSSTTSTTCCTTHHHHHHHHHHHHHC---CSEEEEES--SCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCEEEeCC---CcCcCCCCCCCCCcccHHHHHHHHhhC---CCCEEEec--CCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 99875422 2221110 0 234677888888776 69999877 55 678899999999999999998753
No 31
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=96.86 E-value=0.014 Score=53.40 Aligned_cols=117 Identities=21% Similarity=0.260 Sum_probs=85.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+|+++|.+.|-+=.|.-++ +|+ ++.+++|++.|..|++-+....+ ..++|+.+.++++ +.|
T Consensus 108 ~a~~~Gvd~i~if~~~sd~-~ni---~~~i~~ak~~G~~v~~~i~~~~~------------~~~~~e~~~~~a~~l~~~G 171 (464)
T 2nx9_A 108 RAVKNGMDVFRVFDAMNDV-RNM---QQALQAVKKMGAHAQGTLCYTTS------------PVHNLQTWVDVAQQLAELG 171 (464)
T ss_dssp HHHHTTCCEEEECCTTCCT-HHH---HHHHHHHHHTTCEEEEEEECCCC------------TTCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcCEEEEEEecCHH-HHH---HHHHHHHHHCCCEEEEEEEeeeC------------CCCCHHHHHHHHHHHHHCC
Confidence 4678888876644444444 455 57899999999999988744322 2357887777754 579
Q ss_pred CcEEEEe--cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEee
Q 029526 79 IDALAVC--IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 79 vD~LAva--iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KIN 144 (192)
+|.|.++ +|.. .|.-=.++++.+++.+ ++||-+|+ .+|+.-...-.|++.|+.-|.
T Consensus 172 ad~I~l~DT~G~~-------~P~~v~~lv~~l~~~~---~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD 231 (464)
T 2nx9_A 172 VDSIALKDMAGIL-------TPYAAEELVSTLKKQV---DVELHLHCHSTAGLADMTLLKAIEAGVDRVD 231 (464)
T ss_dssp CSEEEEEETTSCC-------CHHHHHHHHHHHHHHC---CSCEEEEECCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEcCCCCCc-------CHHHHHHHHHHHHHhc---CCeEEEEECCCCChHHHHHHHHHHhCCCEEE
Confidence 9988775 4433 2544466778888776 58888776 889999999999999999874
No 32
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.85 E-value=0.063 Score=47.43 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=81.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK--GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
.++++|++-|-++.++-.- +.+.++++.+++. ++.|=. + ..+++++|+... +.|+
T Consensus 160 ~~~~~G~d~i~i~~~~g~~----~~~~e~i~~ir~~~~~~pviv-----~-------------~v~~~~~a~~a~-~~Ga 216 (404)
T 1eep_A 160 ELVKAHVDILVIDSAHGHS----TRIIELIKKIKTKYPNLDLIA-----G-------------NIVTKEAALDLI-SVGA 216 (404)
T ss_dssp HHHHTTCSEEEECCSCCSS----HHHHHHHHHHHHHCTTCEEEE-----E-------------EECSHHHHHHHH-TTTC
T ss_pred HHHHCCCCEEEEeCCCCCh----HHHHHHHHHHHHHCCCCeEEE-----c-------------CCCcHHHHHHHH-hcCC
Confidence 4678899999888766422 3444555555543 665532 1 124578888755 7899
Q ss_pred cEEEEecCcC-CCC-----CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 80 DALAVCIGNV-HGK-----YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 80 D~LAvaiGt~-HG~-----y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
|.+-|+.|.- |+. +.+ .| +++.|.++.+..+..++|++.=||-.. .+++.+++.+|..=|.++|.+.
T Consensus 217 d~I~vg~~~G~~~~~~~~~~~g-~p--~~~~l~~v~~~~~~~~ipVia~GGI~~-~~d~~~ala~GAd~V~iG~~~l 289 (404)
T 1eep_A 217 DCLKVGIGPGSICTTRIVAGVG-VP--QITAICDVYEACNNTNICIIADGGIRF-SGDVVKAIAAGADSVMIGNLFA 289 (404)
T ss_dssp SEEEECSSCSTTSHHHHHHCCC-CC--HHHHHHHHHHHHTTSSCEEEEESCCCS-HHHHHHHHHHTCSEEEECHHHH
T ss_pred CEEEECCCCCcCcCccccCCCC-cc--hHHHHHHHHHHHhhcCceEEEECCCCC-HHHHHHHHHcCCCHHhhCHHHh
Confidence 9999854221 110 111 24 467788888765444799998886554 4669999999999999999984
No 33
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=96.79 E-value=0.007 Score=52.76 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=100.3
Q ss_pred hhhhcCCCEeEeeC--C--------CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMVDG--S--------HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D~--S--------~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+|+++|.+.|-+=. | ..+.+||++..++++++|+++|..|+.-+-... ....++|+...
T Consensus 104 ~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~-----------~~~~~~~~~~~ 172 (337)
T 3ble_A 104 WIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWS-----------NGFRNSPDYVK 172 (337)
T ss_dssp HHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHH-----------HHHHHCHHHHH
T ss_pred HHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC-----------CCCcCCHHHHH
Confidence 57788877664332 3 136799999999999999999998874322100 01236777665
Q ss_pred HHh---hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEe---
Q 029526 72 EFI---DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKF--- 143 (192)
Q Consensus 72 ~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KI--- 143 (192)
+++ .+.|+|.+.++ -.=|.- .|.-=.++++.+++.+. ++||-+|+ ..|+.-...-.|++.|+.-|
T Consensus 173 ~~~~~~~~~Ga~~i~l~--DT~G~~---~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~t 245 (337)
T 3ble_A 173 SLVEHLSKEHIERIFLP--DTLGVL---SPEETFQGVDSLIQKYP--DIHFEFHGHNDYDLSVANSLQAIRAGVKGLHAS 245 (337)
T ss_dssp HHHHHHHTSCCSEEEEE--CTTCCC---CHHHHHHHHHHHHHHCT--TSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHHHHHHcCCCEEEEe--cCCCCc---CHHHHHHHHHHHHHhcC--CCeEEEEecCCcchHHHHHHHHHHhCCCEEEEe
Confidence 554 46799987763 222222 25444667778877763 58888776 78999999999999999987
Q ss_pred ---------ecchHHHHHHHHHh-c-CCCCChHHHHH
Q 029526 144 ---------NVNTEVRKAYMDSL-S-RPKSDLIHLMA 169 (192)
Q Consensus 144 ---------Ni~T~l~~a~~~~~-~-~~~~~~~~~~~ 169 (192)
|..|+-...+.+.. . +...|+..+.+
T Consensus 246 v~GlG~~aGN~~~E~lv~~L~~~~g~~tgidl~~L~~ 282 (337)
T 3ble_A 246 INGLGERAGNTPLEALVTTIHDKSNSKTNINEIAITE 282 (337)
T ss_dssp GGGCSSTTCBCBHHHHHHHHHHHSSCCCCCCGGGHHH
T ss_pred cccccccccchhHHHHHHHHHHhcCCCCCcCHHHHHH
Confidence 56788777776665 2 23345554433
No 34
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.78 E-value=0.0034 Score=51.36 Aligned_cols=79 Identities=20% Similarity=0.216 Sum_probs=62.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|.+..+.+++.|+|+|-+.-.+.++. . ...+++.+++|++.+ ++|+..||+-- +.+++.++.+.|+..|-
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~--~--~~~~~~~i~~i~~~~---~ipvi~~ggI~-~~~~~~~~~~~Gad~V~ 101 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE--K--RKTMLELVEKVAEQI---DIPFTVGGGIH-DFETASELILRGADKVS 101 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS--H--HHHHHHHHHHHHTTC---CSCEEEESSCC-SHHHHHHHHHTTCSEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc--C--CcccHHHHHHHHHhC---CCCEEEeCCCC-CHHHHHHHHHcCCCEEE
Confidence 5888877778899999999986554432 1 334677888888766 69999999994 55679999999999999
Q ss_pred cchHHHH
Q 029526 145 VNTEVRK 151 (192)
Q Consensus 145 i~T~l~~ 151 (192)
+++.+..
T Consensus 102 lg~~~l~ 108 (253)
T 1thf_D 102 INTAAVE 108 (253)
T ss_dssp ESHHHHH
T ss_pred EChHHHh
Confidence 9998753
No 35
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.76 E-value=0.13 Score=42.90 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=95.4
Q ss_pred hhhhcCCCEeEeeCCC---------CCHHHHHHHHHHHHHHHHhCCCeEEE--------ecc----ccccCCCCCccc--
Q 029526 2 EAIVLGFDSLMVDGSH---------LPFKDNISHTKYISFLAHSKGMLVEA--------ELG----RLSGTEDGLTVE-- 58 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~---------l~~eeNi~~Tk~vv~~Ah~~gv~VEa--------ElG----~i~g~e~~~~~~-- 58 (192)
+|++.|-+.|-+=--. ++.++-++..+++.++|+.+|+.+=- ++| |++ .+|.....
T Consensus 51 ~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~~~lA~~~gAdGVHLg-~~dl~~~~~r 129 (243)
T 3o63_A 51 AALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLG-QRDLPVNVAR 129 (243)
T ss_dssp HHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSEEEEC-TTSSCHHHHH
T ss_pred HHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCHHHHHHHhCCCEEEec-CCcCCHHHHH
Confidence 5788999999885444 78899999999999999999875432 223 222 22211000
Q ss_pred -------cccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCC-CCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHH
Q 029526 59 -------DYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKY-PSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAE 130 (192)
Q Consensus 59 -------~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y-~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e 130 (192)
.....-.+++|+++ ..+.|+|.+.+ |++.-.. +++.+.+.++.|+++.+... .++|+|-=||- ..+
T Consensus 130 ~~~~~~~~iG~S~ht~~Ea~~-A~~~GaDyI~v--gpvf~T~tK~~~~~~gl~~l~~~~~~~~-~~iPvvAiGGI--~~~ 203 (243)
T 3o63_A 130 QILAPDTLIGRSTHDPDQVAA-AAAGDADYFCV--GPCWPTPTKPGRAAPGLGLVRVAAELGG-DDKPWFAIGGI--NAQ 203 (243)
T ss_dssp HHSCTTCEEEEEECSHHHHHH-HHHSSCSEEEE--CCSSCCCC-----CCCHHHHHHHHTC----CCCEEEESSC--CTT
T ss_pred HhhCCCCEEEEeCCCHHHHHH-HhhCCCCEEEE--cCccCCCCCCCcchhhHHHHHHHHHhcc-CCCCEEEecCC--CHH
Confidence 00111368899877 55689999886 4543211 11124578999999987620 16999988855 678
Q ss_pred HHHHHHhcCCeEeecchHHH
Q 029526 131 LIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 131 ~~~~~i~~Gi~KINi~T~l~ 150 (192)
++..+.+.|+.=|=+.+.+.
T Consensus 204 ni~~~~~aGa~gvav~sai~ 223 (243)
T 3o63_A 204 RLPAVLDAGARRIVVVRAIT 223 (243)
T ss_dssp THHHHHHTTCCCEEESHHHH
T ss_pred HHHHHHHcCCCEEEEeHHHh
Confidence 89999999999999999875
No 36
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.71 E-value=0.0034 Score=51.31 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=62.3
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.|.||.+..+.+++.|+|+|-+..-+. .+.+ .+.. +.+++|++.+ ++|+..||+--.|+ ++..+++.|+..
T Consensus 30 ~~~d~~~~a~~~~~~Gad~i~v~~~d~--~~~~-~~~~--~~i~~i~~~~---~ipv~v~ggI~~~~-~~~~~l~~Gad~ 100 (244)
T 1vzw_A 30 SYGSPLEAALAWQRSGAEWLHLVDLDA--AFGT-GDNR--ALIAEVAQAM---DIKVELSGGIRDDD-TLAAALATGCTR 100 (244)
T ss_dssp BCCCHHHHHHHHHHTTCSEEEEEEHHH--HHTS-CCCH--HHHHHHHHHC---SSEEEEESSCCSHH-HHHHHHHTTCSE
T ss_pred ecCCHHHHHHHHHHcCCCEEEEecCch--hhcC-CChH--HHHHHHHHhc---CCcEEEECCcCCHH-HHHHHHHcCCCE
Confidence 466998888888899999999875332 2222 1322 8889998887 69999999987655 699999999999
Q ss_pred eecchHHHH
Q 029526 143 FNVNTEVRK 151 (192)
Q Consensus 143 INi~T~l~~ 151 (192)
|-+++++..
T Consensus 101 V~lg~~~l~ 109 (244)
T 1vzw_A 101 VNLGTAALE 109 (244)
T ss_dssp EEECHHHHH
T ss_pred EEECchHhh
Confidence 999997653
No 37
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.70 E-value=0.049 Score=46.62 Aligned_cols=81 Identities=19% Similarity=0.180 Sum_probs=59.4
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
+++++++.. .+.|+|.+-+. |...|.+.+.....++++|+++++.+ ++|++.=||-. +.+++.+++..|..=|-
T Consensus 126 ~t~~~a~~~-~~~GaD~i~v~-g~~~GG~~G~~~~~~~~~l~~v~~~~---~iPviaaGGI~-~~~~v~~al~~GAdgV~ 199 (328)
T 2gjl_A 126 TAVRHALKA-ERLGVDAVSID-GFECAGHPGEDDIPGLVLLPAAANRL---RVPIIASGGFA-DGRGLVAALALGADAIN 199 (328)
T ss_dssp SSHHHHHHH-HHTTCSEEEEE-CTTCSBCCCSSCCCHHHHHHHHHTTC---CSCEEEESSCC-SHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHH-HHcCCCEEEEE-CCCCCcCCCCccccHHHHHHHHHHhc---CCCEEEECCCC-CHHHHHHHHHcCCCEEE
Confidence 678888874 46899999874 44444333211225788899998877 69999998544 35679999999999999
Q ss_pred cchHHHH
Q 029526 145 VNTEVRK 151 (192)
Q Consensus 145 i~T~l~~ 151 (192)
++|.+..
T Consensus 200 vGs~~~~ 206 (328)
T 2gjl_A 200 MGTRFLA 206 (328)
T ss_dssp ESHHHHT
T ss_pred ECHHHHc
Confidence 9998754
No 38
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.66 E-value=0.0029 Score=51.53 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=61.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
+.+|.+..+.+++.|+|+|-+..-+. .+.+ .+ .++.+++|++.+ ++|+..||+--.|+ ++..+++.|+..|
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~~~d~--~~~~-~~--~~~~i~~i~~~~---~ipv~v~ggi~~~~-~~~~~l~~Gad~V 100 (244)
T 2y88_A 30 YGSAVDAALGWQRDGAEWIHLVDLDA--AFGR-GS--NHELLAEVVGKL---DVQVELSGGIRDDE-SLAAALATGCARV 100 (244)
T ss_dssp EEEHHHHHHHHHHTTCSEEEEEEHHH--HTTS-CC--CHHHHHHHHHHC---SSEEEEESSCCSHH-HHHHHHHTTCSEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCcc--cccC-CC--hHHHHHHHHHhc---CCcEEEECCCCCHH-HHHHHHHcCCCEE
Confidence 45888887788888999999875332 2332 23 338899999887 69999999987655 6999999999999
Q ss_pred ecchHHHH
Q 029526 144 NVNTEVRK 151 (192)
Q Consensus 144 Ni~T~l~~ 151 (192)
-+++++..
T Consensus 101 ~lg~~~l~ 108 (244)
T 2y88_A 101 NVGTAALE 108 (244)
T ss_dssp EECHHHHH
T ss_pred EECchHhh
Confidence 99998653
No 39
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.66 E-value=0.046 Score=46.56 Aligned_cols=116 Identities=21% Similarity=0.197 Sum_probs=89.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|..+|-+.|.++.+.|+. ...++++++||.+|..+=.|+ .+++|+++-+ +.|.|.
T Consensus 137 ea~~~GAD~VlLi~a~L~~----~~l~~l~~~a~~lGl~~lvev-------------------h~~eEl~~A~-~~ga~i 192 (272)
T 3tsm_A 137 EARSWGADCILIIMASVDD----DLAKELEDTAFALGMDALIEV-------------------HDEAEMERAL-KLSSRL 192 (272)
T ss_dssp HHHHTTCSEEEEETTTSCH----HHHHHHHHHHHHTTCEEEEEE-------------------CSHHHHHHHT-TSCCSE
T ss_pred HHHHcCCCEEEEcccccCH----HHHHHHHHHHHHcCCeEEEEe-------------------CCHHHHHHHH-hcCCCE
Confidence 5778999999999999975 357899999999998766653 3457776644 679998
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+.+.--+.+ .-..|++...++...+.. ++|+|- .||+ +.++++++.++|+.=|=|++.+.
T Consensus 193 IGinnr~l~------t~~~dl~~~~~L~~~ip~-~~~vIa--esGI~t~edv~~l~~~Ga~gvLVG~alm 253 (272)
T 3tsm_A 193 LGVNNRNLR------SFEVNLAVSERLAKMAPS-DRLLVG--ESGIFTHEDCLRLEKSGIGTFLIGESLM 253 (272)
T ss_dssp EEEECBCTT------TCCBCTHHHHHHHHHSCT-TSEEEE--ESSCCSHHHHHHHHTTTCCEEEECHHHH
T ss_pred EEECCCCCc------cCCCChHHHHHHHHhCCC-CCcEEE--ECCCCCHHHHHHHHHcCCCEEEEcHHHc
Confidence 866533332 245688988888887632 477775 5567 77889999999999999999885
No 40
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.66 E-value=0.037 Score=48.63 Aligned_cols=133 Identities=13% Similarity=0.125 Sum_probs=90.3
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|+++||+-|=+.+++ -+++...+...++++-.++. |- .|-. +|...+. ...
T Consensus 169 ~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~v---rls~~~~-~~~-- 242 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGI---RVSPIGT-FQN-- 242 (364)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEE---EECCSSC-BTT--
T ss_pred HHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEE---EEccccc-ccc--
Confidence 5789999999998764 13788889999999888762 21 1111 1111110 000
Q ss_pred ccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 60 YEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 60 ~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
....-.+++++.+| +++.|+|+|.++.|+.++. |..+++.+++|++.+ ++|++.=|+- +.++..+++
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-----~~~~~~~~~~v~~~~---~iPvi~~Ggi--t~~~a~~~l 312 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-----KPYSEAFRQKVRERF---HGVIIGAGAY--TAEKAEDLI 312 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-----CCCCHHHHHHHHHHC---CSEEEEESSC--CHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-----CcccHHHHHHHHHHC---CCCEEEECCc--CHHHHHHHH
Confidence 00001245565555 4567999999998876543 224678889999988 6999988875 789999999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.=|=+++.+.
T Consensus 313 ~~g~aD~V~~gR~~l 327 (364)
T 1vyr_A 313 GKGLIDAVAFGRDYI 327 (364)
T ss_dssp HTTSCSEEEESHHHH
T ss_pred HCCCccEEEECHHHH
Confidence 998 88888888764
No 41
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.65 E-value=0.061 Score=47.01 Aligned_cols=134 Identities=12% Similarity=0.157 Sum_probs=91.1
Q ss_pred hhhhcCCCEeEeeCCC----------C----------CHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccc
Q 029526 2 EAIVLGFDSLMVDGSH----------L----------PFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVE 58 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~----------l----------~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~ 58 (192)
+|.++||+-|-+-+.+ . ++|...+...||++-.++. +..|-.-|..-.-.++
T Consensus 151 ~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~----- 225 (343)
T 3kru_A 151 RANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEG----- 225 (343)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTT-----
T ss_pred hccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhcc-----
Confidence 6889999999998642 1 5788899999999998864 3444443332110111
Q ss_pred cccccCCCHHHHHHHh---hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 59 DYEAKLTDVNQAEEFI---DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 59 ~~~~~~T~peea~~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
-.+++++.+|+ ++. +|+|-++.|..........|..+++.+++|++.+ ++|++.=|+-. +.++..++
T Consensus 226 -----g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~Ggi~-t~e~Ae~~ 295 (343)
T 3kru_A 226 -----GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC---NIKTSAVGLIT-TQELAEEI 295 (343)
T ss_dssp -----SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---TCEEEEESSCC-CHHHHHHH
T ss_pred -----CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc---Ccccceeeeee-HHHHHHHH
Confidence 12455555554 456 9999998765543111112557889999999998 69998887543 46778899
Q ss_pred HhcC-CeEeecchHHH
Q 029526 136 IERG-VRKFNVNTEVR 150 (192)
Q Consensus 136 i~~G-i~KINi~T~l~ 150 (192)
++.| +.=|=+++.+.
T Consensus 296 l~~G~aD~V~iGR~~l 311 (343)
T 3kru_A 296 LSNERADLVALGRELL 311 (343)
T ss_dssp HHTTSCSEEEESHHHH
T ss_pred HhchhhHHHHHHHHHh
Confidence 9988 77888887763
No 42
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=96.62 E-value=0.042 Score=47.74 Aligned_cols=139 Identities=18% Similarity=0.211 Sum_probs=90.0
Q ss_pred hhhcCCCEe-EeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIVLGFDSL-MVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~~GFtSV-M~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
|...|.+.| .+|- -.|++...+++++|++.|..|+.-+-..++..+. +..+ +.+.+ + +.|+|.
T Consensus 96 a~~~Gvd~~ri~~~-----~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~------~~~l---~~~~~-~-~~G~~~ 159 (320)
T 3dxi_A 96 PIIGLVDMIRIAID-----PQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEM------NGFL---SKLKA-I-DKIADL 159 (320)
T ss_dssp GGTTTCSEEEEEEC-----GGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGS------TTSG---GGGGG-G-TTTCSE
T ss_pred hhhcCCCEEEEEec-----HHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCH------HHHH---HHHHH-h-hCCCCE
Confidence 445677666 3441 1379999999999999999998766543222110 0011 12222 2 359998
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEe------------ecch
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKF------------NVNT 147 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KI------------Ni~T 147 (192)
+.+. -.=|.- .|.-=.++++.+++.+ ++||-+|. ..|+.....-.|++.|+.-| |..|
T Consensus 160 i~l~--Dt~G~~---~P~~~~~lv~~l~~~~---~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~~~GN~~~ 231 (320)
T 3dxi_A 160 FCMV--DSFGGI---TPKEVKNLLKEVRKYT---HVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGRGAGNLKM 231 (320)
T ss_dssp EEEE--CTTSCC---CHHHHHHHHHHHHHHC---CSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBH
T ss_pred EEEC--cccCCC---CHHHHHHHHHHHHHhC---CCeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCCcccchhH
Confidence 7765 222321 2443456677787776 58888875 67888999999999999887 7788
Q ss_pred HHHHHHHHHhcCCCCChH
Q 029526 148 EVRKAYMDSLSRPKSDLI 165 (192)
Q Consensus 148 ~l~~a~~~~~~~~~~~~~ 165 (192)
+....+.+.......|+.
T Consensus 232 E~lv~~L~~~~~~~~dl~ 249 (320)
T 3dxi_A 232 ELLLTYLNKHHGLNVDFN 249 (320)
T ss_dssp HHHHHHHHHHSCCCCCHH
T ss_pred HHHHHHHHhccCCCcCHH
Confidence 888777776334444554
No 43
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=96.61 E-value=0.028 Score=49.83 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=88.1
Q ss_pred hhh-hcCCCEeEeeCCC---------------------C-CHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCc
Q 029526 2 EAI-VLGFDSLMVDGSH---------------------L-PFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLT 56 (192)
Q Consensus 2 ~ai-~~GFtSVM~D~S~---------------------l-~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~ 56 (192)
+|+ ++||+-|=+.+.+ - +++...+...++++-.++. |- .|-.= |.. .+...
T Consensus 182 ~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vR---is~-~~~~~ 257 (379)
T 3aty_A 182 NAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLR---ISP-LNGVH 257 (379)
T ss_dssp HHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEE---ECT-TCCGG
T ss_pred HHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEE---ECc-ccccc
Confidence 678 8999999998764 1 7888899999999988752 21 11111 111 11000
Q ss_pred cccccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHH
Q 029526 57 VEDYEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIK 133 (192)
Q Consensus 57 ~~~~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~ 133 (192)
... .-.+++++.+| +++.|+|+|-++.|+.+. +. .| .+ +++|++.+ ++|++.=|+- +.++..
T Consensus 258 --~~~-~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~-~~---~~-~~~ir~~~---~iPvi~~G~i--t~~~a~ 322 (379)
T 3aty_A 258 --GMI-DSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQ-IG---DV-VAWVRGSY---SGVKISNLRY--DFEEAD 322 (379)
T ss_dssp --GCC-CSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CC-CC---CH-HHHHHTTC---CSCEEEESSC--CHHHHH
T ss_pred --cCC-CCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CC-cc---HH-HHHHHHHC---CCcEEEECCC--CHHHHH
Confidence 000 01245566665 456799999999987543 11 12 26 88899888 6999988875 788999
Q ss_pred HHHhcC-CeEeecchHHH
Q 029526 134 GCIERG-VRKFNVNTEVR 150 (192)
Q Consensus 134 ~~i~~G-i~KINi~T~l~ 150 (192)
++++.| +.=|.+++.+.
T Consensus 323 ~~l~~g~aD~V~igR~~l 340 (379)
T 3aty_A 323 QQIREGKVDAVAFGAKFI 340 (379)
T ss_dssp HHHHTTSCSEEEESHHHH
T ss_pred HHHHcCCCeEEEecHHHH
Confidence 999998 88999998874
No 44
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.61 E-value=0.027 Score=49.14 Aligned_cols=136 Identities=15% Similarity=0.114 Sum_probs=86.7
Q ss_pred hhhhcCCCEeEeeCC-----------CCCHHHHHHHHHHHHHHHHh-CCCeEEEeccccccCCCCCccccccccCCCHHH
Q 029526 2 EAIVLGFDSLMVDGS-----------HLPFKDNISHTKYISFLAHS-KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQ 69 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S-----------~l~~eeNi~~Tk~vv~~Ah~-~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pee 69 (192)
.+.++||+-|-+-++ .-.++.+.+...++++-.++ .+++|-.=+- +|. .+. ..+.+..+
T Consensus 78 ~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR-~g~-~~~-------~~~~~~~~ 148 (350)
T 3b0p_A 78 IGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMR-LGL-EGK-------ETYRGLAQ 148 (350)
T ss_dssp HHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEE-SCB-TTC-------CCHHHHHH
T ss_pred HHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEe-cCc-Ccc-------ccHHHHHH
Confidence 466789999988753 11345667778888777765 4666654221 211 110 01112223
Q ss_pred HHHHhhhhCCcEEEEecCcCCCCCCCC----CCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 70 AEEFIDETDIDALAVCIGNVHGKYPSS----GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 70 a~~Fv~~TgvD~LAvaiGt~HG~y~~~----~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
..+-+++.|+|.|.|.-++.-+.|.+. .|..+++.+++|++.+. ++|++.=||-. +.+++.++++ |+.-|-+
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~--~iPVianGgI~-s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP--QLTFVTNGGIR-SLEEALFHLK-RVDGVML 224 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT--TSEEEEESSCC-SHHHHHHHHT-TSSEEEE
T ss_pred HHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC--CCeEEEECCcC-CHHHHHHHHh-CCCEEEE
Confidence 333456789999999876654344321 24579999999998872 49999988654 4567888888 9999999
Q ss_pred chHHH
Q 029526 146 NTEVR 150 (192)
Q Consensus 146 ~T~l~ 150 (192)
++.+.
T Consensus 225 GRa~l 229 (350)
T 3b0p_A 225 GRAVY 229 (350)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 99873
No 45
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.58 E-value=0.073 Score=46.39 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=57.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCC-C-----C--CC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSG-P-----N--LK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~-p-----~--ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
+++++++. ..+.|+|+|-+. |..-|.+.+.. + . +. ++++++|++.+ ++|++.=||-. ..+++.++
T Consensus 153 ~t~~~a~~-a~~~GaD~i~v~-g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~---~iPViaaGGI~-~~~~~~~~ 226 (369)
T 3bw2_A 153 TTPEEARA-VEAAGADAVIAQ-GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV---DIPVVAAGGIM-RGGQIAAV 226 (369)
T ss_dssp SSHHHHHH-HHHTTCSEEEEE-CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC---SSCEEEESSCC-SHHHHHHH
T ss_pred CCHHHHHH-HHHcCCCEEEEe-CCCcCCcCCCcccccccccccccHHHHHHHHHHhc---CceEEEECCCC-CHHHHHHH
Confidence 67888876 457899999883 32222222110 1 1 44 88899998877 69999988443 56779999
Q ss_pred HhcCCeEeecchHHH
Q 029526 136 IERGVRKFNVNTEVR 150 (192)
Q Consensus 136 i~~Gi~KINi~T~l~ 150 (192)
+..|..=|-++|.+.
T Consensus 227 l~~GAd~V~vGs~~~ 241 (369)
T 3bw2_A 227 LAAGADAAQLGTAFL 241 (369)
T ss_dssp HHTTCSEEEESHHHH
T ss_pred HHcCCCEEEEChHHh
Confidence 999999999999884
No 46
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.57 E-value=0.051 Score=50.74 Aligned_cols=135 Identities=14% Similarity=0.178 Sum_probs=89.7
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVE 58 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~ 58 (192)
+|.++||+-|-+.+++ -+++...+...++++-.++. +..|-.=|..- +...
T Consensus 149 ~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~----~~~~-- 222 (671)
T 1ps9_A 149 LAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSML----DLVE-- 222 (671)
T ss_dssp HHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEE----CCST--
T ss_pred HHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcc----ccCC--
Confidence 6889999999998765 14688889999999988863 23332211110 0000
Q ss_pred cccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCC----CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHH
Q 029526 59 DYEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPS----SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAEL 131 (192)
Q Consensus 59 ~~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~----~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~ 131 (192)
.-.+++++.+| +++.|+|+|.++.|+....++. ..+...++.+++|++.+ ++|++.=|+-- +.++
T Consensus 223 ----~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~iPvi~~Ggi~-~~~~ 294 (671)
T 1ps9_A 223 ----DGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV---SLPLVTTNRIN-DPQV 294 (671)
T ss_dssp ----TCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC---SSCEEECSSCC-SHHH
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc---CceEEEeCCCC-CHHH
Confidence 01245555555 4568999999998875443321 11234568888898877 69988776432 6788
Q ss_pred HHHHHhcC-CeEeecchHHH
Q 029526 132 IKGCIERG-VRKFNVNTEVR 150 (192)
Q Consensus 132 ~~~~i~~G-i~KINi~T~l~ 150 (192)
..++++.| +.=|-+++.+.
T Consensus 295 a~~~l~~g~aD~V~~gR~~l 314 (671)
T 1ps9_A 295 ADDILSRGDADMVSMARPFL 314 (671)
T ss_dssp HHHHHHTTSCSEEEESTHHH
T ss_pred HHHHHHcCCCCEEEeCHHHH
Confidence 99999998 88899988774
No 47
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=96.42 E-value=0.07 Score=45.96 Aligned_cols=79 Identities=11% Similarity=0.115 Sum_probs=61.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.+++++|+.. .+.|+|.+-+. |..+|.+.+ +..++++|.++.+.+ ++|++.=||-+. .+++.+++.+|..=|
T Consensus 131 v~s~~~a~~a-~~~GaD~i~v~-g~~~GG~~G--~~~~~~ll~~i~~~~---~iPviaaGGI~~-~~dv~~al~~GA~gV 202 (326)
T 3bo9_A 131 VASDSLARMV-ERAGADAVIAE-GMESGGHIG--EVTTFVLVNKVSRSV---NIPVIAAGGIAD-GRGMAAAFALGAEAV 202 (326)
T ss_dssp ESSHHHHHHH-HHTTCSCEEEE-CTTSSEECC--SSCHHHHHHHHHHHC---SSCEEEESSCCS-HHHHHHHHHHTCSEE
T ss_pred cCCHHHHHHH-HHcCCCEEEEE-CCCCCccCC--CccHHHHHHHHHHHc---CCCEEEECCCCC-HHHHHHHHHhCCCEE
Confidence 3678888874 46799998875 444555543 334889999998877 699999995553 567999999999999
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
-++|.+.
T Consensus 203 ~vGs~~~ 209 (326)
T 3bo9_A 203 QMGTRFV 209 (326)
T ss_dssp EESHHHH
T ss_pred EechHHH
Confidence 9999885
No 48
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.40 E-value=0.21 Score=43.05 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=61.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCC---------CCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHH
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKY---------PSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKG 134 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y---------~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~ 134 (192)
.+++++|++.+ +.|+|.+.++. ||.. .+ .|.+.++.|.++.+.+ ++|++.=||-..+.| +.+
T Consensus 157 v~s~e~A~~a~-~aGad~Ivvs~---hgG~~~~~~~~~~~g-~~g~~~~~l~~v~~~~---~ipVIa~GGI~~g~D-v~k 227 (336)
T 1ypf_A 157 VGTPEAVRELE-NAGADATKVGI---GPGKVCITKIKTGFG-TGGWQLAALRWCAKAA---SKPIIADGGIRTNGD-VAK 227 (336)
T ss_dssp ECSHHHHHHHH-HHTCSEEEECS---SCSTTCHHHHHHSCS-STTCHHHHHHHHHHTC---SSCEEEESCCCSTHH-HHH
T ss_pred cCCHHHHHHHH-HcCCCEEEEec---CCCceeecccccCcC-CchhHHHHHHHHHHHc---CCcEEEeCCCCCHHH-HHH
Confidence 46789988855 78999998843 5532 22 2444688889998877 699999999887766 778
Q ss_pred HHhcCCeEeecchHHH
Q 029526 135 CIERGVRKFNVNTEVR 150 (192)
Q Consensus 135 ~i~~Gi~KINi~T~l~ 150 (192)
++.+|..=+-++|.+.
T Consensus 228 alalGAdaV~iGr~~l 243 (336)
T 1ypf_A 228 SIRFGATMVMIGSLFA 243 (336)
T ss_dssp HHHTTCSEEEESGGGT
T ss_pred HHHcCCCEEEeChhhh
Confidence 8899999999999997
No 49
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.35 E-value=0.08 Score=42.77 Aligned_cols=121 Identities=14% Similarity=0.187 Sum_probs=74.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK--GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
+++++|.+-|-+++.......+ ....++++.+++. ++.|=.+ ..++++++.. .+.|+
T Consensus 96 ~~~~~Gad~V~l~~~~~~~~~~-~~~~~~i~~i~~~~~~~~v~~~-------------------~~t~~ea~~a-~~~Ga 154 (234)
T 1yxy_A 96 QLAALNIAVIAMDCTKRDRHDG-LDIASFIRQVKEKYPNQLLMAD-------------------ISTFDEGLVA-HQAGI 154 (234)
T ss_dssp HHHTTTCSEEEEECCSSCCTTC-CCHHHHHHHHHHHCTTCEEEEE-------------------CSSHHHHHHH-HHTTC
T ss_pred HHHHcCCCEEEEcccccCCCCC-ccHHHHHHHHHHhCCCCeEEEe-------------------CCCHHHHHHH-HHcCC
Confidence 4667888888888776521100 0113445555543 3332221 2457787764 47899
Q ss_pred cEEEEecCcC-CCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHH
Q 029526 80 DALAVCIGNV-HGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 80 D~LAvaiGt~-HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
|++...+... .|. .. ....+++.++++++. ++|++-=| |+. .+++.++.+.|+.-+=++|.+..
T Consensus 155 d~i~~~v~g~~~~~-~~-~~~~~~~~i~~~~~~----~ipvia~G--GI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 155 DFVGTTLSGYTPYS-RQ-EAGPDVALIEALCKA----GIAVIAEG--KIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp SEEECTTTTSSTTS-CC-SSSCCHHHHHHHHHT----TCCEEEES--CCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred CEEeeeccccCCCC-cC-CCCCCHHHHHHHHhC----CCCEEEEC--CCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 9984222211 111 11 134578888888765 49999877 565 78899999999999999998753
No 50
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=96.34 E-value=0.05 Score=48.54 Aligned_cols=134 Identities=14% Similarity=0.134 Sum_probs=89.8
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-C-CeEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-G-MLVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-g-v~VEaElG~i~g~e~~~~~~~ 59 (192)
+|.++||+-|-|.+.+ -++|...+...||++-.++. | ..|-.-|. ..+. .....
T Consensus 179 ~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls---~~~~-~~g~~ 254 (402)
T 2hsa_B 179 NAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVS---PAID-HLDAM 254 (402)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC---SSCC-STTCC
T ss_pred HHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEec---cccc-cCCCC
Confidence 6889999999999965 14788889999999888752 2 12222222 1111 00000
Q ss_pred ccccCCCHHHHHHHh---hhhC------CcEEEEecCcCCCCCCCCCC------C-CCHHHHHHHHhhhccCCccEEeec
Q 029526 60 YEAKLTDVNQAEEFI---DETD------IDALAVCIGNVHGKYPSSGP------N-LKLDLLKDLHALSSKKGVLLVLHG 123 (192)
Q Consensus 60 ~~~~~T~peea~~Fv---~~Tg------vD~LAvaiGt~HG~y~~~~p------~-ld~~~L~~I~~~~~~~~iPLVlHG 123 (192)
.-.+++++.+|+ ++.| +|+|-++-|+..+.|.. | . -+.+.+++|++.+ ++|++.=|
T Consensus 255 ---~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~vk~~~---~iPvi~~G 326 (402)
T 2hsa_B 255 ---DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQT--EAGRLGSEEEEARLMRTLRNAY---QGTFICSG 326 (402)
T ss_dssp ---CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTS--SSTTTTHHHHHHHHHHHHHHHC---SSCEEEES
T ss_pred ---CCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCC--ccccccCCcchHHHHHHHHHHC---CCCEEEeC
Confidence 012345555554 5678 99999999987653322 2 1 2466778888888 69999888
Q ss_pred CCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 124 ASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 124 gSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
+- +.++..++++.| +.=|=++..+
T Consensus 327 ~i--~~~~a~~~l~~g~aD~V~igR~~ 351 (402)
T 2hsa_B 327 GY--TRELGIEAVAQGDADLVSYGRLF 351 (402)
T ss_dssp SC--CHHHHHHHHHTTSCSEEEESHHH
T ss_pred CC--CHHHHHHHHHCCCCceeeecHHH
Confidence 65 678899999998 7788888776
No 51
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=96.32 E-value=0.035 Score=48.99 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=84.8
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|.++||+-|-|.+++ =++|.-.+...||++-.++. |- .|-.- +...+. .. .
T Consensus 169 ~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vR---ls~~~~-~~--g 242 (361)
T 3gka_A 169 NARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVH---LAPRGD-AH--T 242 (361)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEE---ECTTCC-SS--S
T ss_pred HHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEe---cccccc-cC--C
Confidence 6889999999999987 14777788888888887752 21 22222 222111 00 0
Q ss_pred ccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 60 YEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 60 ~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
.. .-.+.+++.++ +++.|+|+|-++-|+ .| + +.+++|++.+ ++|++.=|+ ++.++..+++
T Consensus 243 ~~-~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~~------~----~~~~~ik~~~---~iPvi~~Gg--it~e~a~~~l 305 (361)
T 3gka_A 243 MG-DSDPAATFGHVARELGRRRIAFLFARESF-GG------D----AIGQQLKAAF---GGPFIVNEN--FTLDSAQAAL 305 (361)
T ss_dssp CC-CSCHHHHHHHHHHHHHHTTCSEEEEECCC-ST------T----CCHHHHHHHH---CSCEEEESS--CCHHHHHHHH
T ss_pred CC-CCCcHHHHHHHHHHHHHcCCCEEEECCCC-CC------H----HHHHHHHHHc---CCCEEEeCC--CCHHHHHHHH
Confidence 00 01123444444 456899999999887 11 2 3478899888 699998886 4888999999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.=|=++..+.
T Consensus 306 ~~G~aD~V~iGR~~l 320 (361)
T 3gka_A 306 DAGQADAVAWGKLFI 320 (361)
T ss_dssp HTTSCSEEEESHHHH
T ss_pred HcCCccEEEECHHhH
Confidence 998 77888888763
No 52
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=96.32 E-value=0.044 Score=48.34 Aligned_cols=126 Identities=11% Similarity=0.097 Sum_probs=85.5
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|.++||+-|-|-+++ =++|.-.+...||++-.++. |- .|-.-|. ..+. .. .
T Consensus 161 ~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls---~~~~-~~--g 234 (362)
T 4ab4_A 161 NAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLA---PRAD-AH--D 234 (362)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC---TTCC-SS--S
T ss_pred HHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEee---cccc-cc--c
Confidence 6899999999999987 14788888889998887753 21 2222222 2111 00 0
Q ss_pred ccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 60 YEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 60 ~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
.. .-++.+++.+| +++.|+|+|-++-|+ .| + +.+++|++.+ ++|++.=|+- +.++..+++
T Consensus 235 ~~-~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~~------~----~~~~~ik~~~---~iPvi~~Ggi--t~e~a~~~l 297 (362)
T 4ab4_A 235 MG-DADRAETFTYVARELGKRGIAFICSRERE-AD------D----SIGPLIKEAF---GGPYIVNERF--DKASANAAL 297 (362)
T ss_dssp CC-CTTHHHHHHHHHHHHHHTTCSEEEEECCC-CT------T----CCHHHHHHHH---CSCEEEESSC--CHHHHHHHH
T ss_pred cC-CCCcHHHHHHHHHHHHHhCCCEEEECCCC-CC------H----HHHHHHHHHC---CCCEEEeCCC--CHHHHHHHH
Confidence 00 01123445555 456899999999887 21 2 3478899888 6999988874 788999999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.=|=++..+.
T Consensus 298 ~~g~aD~V~iGR~~l 312 (362)
T 4ab4_A 298 ASGKADAVAFGVPFI 312 (362)
T ss_dssp HTTSCSEEEESHHHH
T ss_pred HcCCccEEEECHHhH
Confidence 998 77888888763
No 53
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.32 E-value=0.088 Score=46.43 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=80.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.++++|+. +.+.|+|.+.|+- ||........-.++.|.+|.+.+.. ++|+..=||--.+ +++.+++.+|..=|.
T Consensus 226 ~~~e~A~~-a~~~GaD~I~vsn---~GG~~~d~~~~~~~~L~~i~~av~~-~ipVia~GGI~~g-~Dv~kaLalGA~aV~ 299 (352)
T 3sgz_A 226 LTKEDAEL-AMKHNVQGIVVSN---HGGRQLDEVSASIDALREVVAAVKG-KIEVYMDGGVRTG-TDVLKALALGARCIF 299 (352)
T ss_dssp CSHHHHHH-HHHTTCSEEEECC---GGGTSSCSSCCHHHHHHHHHHHHTT-SSEEEEESSCCSH-HHHHHHHHTTCSEEE
T ss_pred CcHHHHHH-HHHcCCCEEEEeC---CCCCccCCCccHHHHHHHHHHHhCC-CCeEEEECCCCCH-HHHHHHHHcCCCEEE
Confidence 67888887 4588999999873 5542111123478899999887742 4999999988765 558888899999999
Q ss_pred cchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 145 VNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 145 i~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
++|.+..+.... -..-.....+.+++.++..|.+.|..
T Consensus 300 iGr~~l~~l~~~-------G~~gv~~~l~~l~~el~~~m~~~G~~ 337 (352)
T 3sgz_A 300 LGRPILWGLACK-------GEDGVKEVLDILTAELHRCMTLSGCQ 337 (352)
T ss_dssp ESHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ECHHHHHHHHhc-------CcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999988664321 01223345677788888889988864
No 54
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=96.31 E-value=0.048 Score=50.69 Aligned_cols=119 Identities=15% Similarity=0.176 Sum_probs=85.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+|+++|.+.|-+=.|.-++ +|+ ++.+++|++.|..|++-+... ++ ..++|+.+.++++ +.|
T Consensus 125 ~a~~aGvd~vrIf~s~sd~-~ni---~~~i~~ak~~G~~v~~~i~~~----~~--------~~~~~e~~~~~a~~l~~~G 188 (539)
T 1rqb_A 125 KSAENGMDVFRVFDAMNDP-RNM---AHAMAAVKKAGKHAQGTICYT----IS--------PVHTVEGYVKLAGQLLDMG 188 (539)
T ss_dssp HHHHTTCCEEEECCTTCCT-HHH---HHHHHHHHHTTCEEEEEEECC----CS--------TTCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCEEEEEEehhHH-HHH---HHHHHHHHHCCCeEEEEEEee----eC--------CCCCHHHHHHHHHHHHHcC
Confidence 4677888766544444454 555 688999999999998877543 21 2457888777755 579
Q ss_pred CcEEEEe--cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEee
Q 029526 79 IDALAVC--IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 79 vD~LAva--iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KIN 144 (192)
+|.|.+. +|.. .|.-=.++++.+++.+. .++||-+|+ .+|+.-...-.|++.|+.-|.
T Consensus 189 ad~I~L~DT~G~~-------~P~~v~~lv~~l~~~~p-~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD 250 (539)
T 1rqb_A 189 ADSIALKDMAALL-------KPQPAYDIIKAIKDTYG-QKTQINLHCHSTTGVTEVSLMKAIEAGVDVVD 250 (539)
T ss_dssp CSEEEEEETTCCC-------CHHHHHHHHHHHHHHHC-TTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCEEEeCCCCCCc-------CHHHHHHHHHHHHHhcC-CCceEEEEeCCCCChHHHHHHHHHHhCCCEEE
Confidence 9987764 4332 25545677788887773 137887776 899999999999999999884
No 55
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=96.23 E-value=0.081 Score=42.21 Aligned_cols=137 Identities=11% Similarity=0.126 Sum_probs=83.7
Q ss_pred hhhhcCCCEeEee---CCCCCH---HHHHHHHHHHHHHHHhCCCeEEE--e------cc----ccccCCCCC-ccc-c-c
Q 029526 2 EAIVLGFDSLMVD---GSHLPF---KDNISHTKYISFLAHSKGMLVEA--E------LG----RLSGTEDGL-TVE-D-Y 60 (192)
Q Consensus 2 ~ai~~GFtSVM~D---~S~l~~---eeNi~~Tk~vv~~Ah~~gv~VEa--E------lG----~i~g~e~~~-~~~-~-~ 60 (192)
+++++|.+.|-++ +|...+ .++++..+ ++++.+|+.|-. . .| +++ ..+.. ... . .
T Consensus 39 ~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~---~~~~~~~v~v~v~~~~~~a~~~gad~v~l~-~~~~~~~~~~~~~ 114 (227)
T 2tps_A 39 KALKGGATLYQFREKGGDALTGEARIKFAEKAQ---AACREAGVPFIVNDDVELALNLKADGIHIG-QEDANAKEVRAAI 114 (227)
T ss_dssp HHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHH---HHHHHHTCCEEEESCHHHHHHHTCSEEEEC-TTSSCHHHHHHHH
T ss_pred HHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHH---HHHHHcCCeEEEcCHHHHHHHcCCCEEEEC-CCccCHHHHHHhc
Confidence 4678899999877 555556 55555444 444555554432 1 11 222 11110 000 0 0
Q ss_pred c-----ccCCCHHHHHHHhhhhCCcEEEEecCcCC-CCCCCC-CCCCCHHHHHHHHhhhccCC-ccEEeecCCCCCHHHH
Q 029526 61 E-----AKLTDVNQAEEFIDETDIDALAVCIGNVH-GKYPSS-GPNLKLDLLKDLHALSSKKG-VLLVLHGASGLSAELI 132 (192)
Q Consensus 61 ~-----~~~T~peea~~Fv~~TgvD~LAvaiGt~H-G~y~~~-~p~ld~~~L~~I~~~~~~~~-iPLVlHGgSG~~~e~~ 132 (192)
. -..++|+++.+ ..+.|+|.+-++ ++. ...+++ .+.++++.++++++.+ + +|++.=|| +..+++
T Consensus 115 g~~~~~~s~~t~~e~~~-a~~~g~d~v~~~--~v~~t~~~~~~~~~~~~~~l~~~~~~~---~~~pvia~GG--I~~~nv 186 (227)
T 2tps_A 115 GDMILGVSAHTMSEVKQ-AEEDGADYVGLG--PIYPTETKKDTRAVQGVSLIEAVRRQG---ISIPIVGIGG--ITIDNA 186 (227)
T ss_dssp TTSEEEEEECSHHHHHH-HHHHTCSEEEEC--CSSCCCSSSSCCCCCTTHHHHHHHHTT---CCCCEEEESS--CCTTTS
T ss_pred CCcEEEEecCCHHHHHH-HHhCCCCEEEEC--CCcCCCCCCCCCCccCHHHHHHHHHhC---CCCCEEEEcC--CCHHHH
Confidence 0 00268888766 447899998863 221 111111 2457899999998877 5 99999885 557789
Q ss_pred HHHHhcCCeEeecchHHH
Q 029526 133 KGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 133 ~~~i~~Gi~KINi~T~l~ 150 (192)
+++++.|..=|=++|.+.
T Consensus 187 ~~~~~~Ga~gv~vgs~i~ 204 (227)
T 2tps_A 187 APVIQAGADGVSMISAIS 204 (227)
T ss_dssp HHHHHTTCSEEEESHHHH
T ss_pred HHHHHcCCCEEEEhHHhh
Confidence 999999999999999885
No 56
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.16 E-value=0.054 Score=45.59 Aligned_cols=116 Identities=20% Similarity=0.198 Sum_probs=88.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh-CCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET-DID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T-gvD 80 (192)
+|..+|-+.|.++++.|+. ...++++++||.+|..+=.|+- +.+|+++- .+. |.|
T Consensus 118 ea~~~GAD~ilLi~a~l~~----~~l~~l~~~a~~lGl~~lvEv~-------------------~~eE~~~A-~~l~g~~ 173 (251)
T 1i4n_A 118 LASSVGADAILIIARILTA----EQIKEIYEAAEELGMDSLVEVH-------------------SREDLEKV-FSVIRPK 173 (251)
T ss_dssp HHHHTTCSEEEEEGGGSCH----HHHHHHHHHHHTTTCEEEEEEC-------------------SHHHHHHH-HTTCCCS
T ss_pred HHHHcCCCEEEEecccCCH----HHHHHHHHHHHHcCCeEEEEeC-------------------CHHHHHHH-HhcCCCC
Confidence 4678999999999999887 4578999999999887777632 34566553 456 999
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHH
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
.+.+..-+.|+ -..|++...++...+.. ++++|- .||+. .++++++.++ +.=|=|++.+..
T Consensus 174 iIGinnr~l~t------~~~d~~~~~~l~~~ip~-~~~vIa--EsGI~t~edv~~~~~~-a~avLVG~aimr 235 (251)
T 1i4n_A 174 IIGINTRDLDT------FEIKKNVLWELLPLVPD-DTVVVA--ESGIKDPRELKDLRGK-VNAVLVGTSIMK 235 (251)
T ss_dssp EEEEECBCTTT------CCBCTTHHHHHGGGSCT-TSEEEE--ESCCCCGGGHHHHTTT-CSEEEECHHHHH
T ss_pred EEEEeCccccc------CCCCHHHHHHHHHhCCC-CCEEEE--eCCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 99988766554 34577777777766531 366665 77885 8889999999 999999998853
No 57
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=96.12 E-value=0.039 Score=47.18 Aligned_cols=120 Identities=18% Similarity=0.177 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhCCcEEEEecCcCCCCCC
Q 029526 18 LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETDIDALAVCIGNVHGKYP 94 (192)
Q Consensus 18 l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~TgvD~LAvaiGt~HG~y~ 94 (192)
.+.+|+++..++++++|++.|..|+.-+ ++ ...++|+.+.++++ +.|+|.+.++ -.=|.-
T Consensus 114 ~s~~e~l~~~~~~v~~a~~~g~~v~~~~------~d--------~~~~~~~~~~~~~~~~~~~G~~~i~l~--DT~G~~- 176 (293)
T 3ewb_X 114 MSRAEVLASIKHHISYARQKFDVVQFSP------ED--------ATRSDRAFLIEAVQTAIDAGATVINIP--DTVGYT- 176 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSCEEEEE------ET--------GGGSCHHHHHHHHHHHHHTTCCEEEEE--CSSSCC-
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEe------cc--------CCCCCHHHHHHHHHHHHHcCCCEEEec--CCCCCC-
Confidence 4679999999999999999998887321 22 13588888777655 5799976554 333432
Q ss_pred CCCCCCCHHHHHHHHhhhccC-CccEEeec--CCCCCHHHHHHHHhcCCeEe------------ecchHHHHHHHHH
Q 029526 95 SSGPNLKLDLLKDLHALSSKK-GVLLVLHG--ASGLSAELIKGCIERGVRKF------------NVNTEVRKAYMDS 156 (192)
Q Consensus 95 ~~~p~ld~~~L~~I~~~~~~~-~iPLVlHG--gSG~~~e~~~~~i~~Gi~KI------------Ni~T~l~~a~~~~ 156 (192)
.|.-=.++++.+++.+... ++||-+|+ ..|+.-...-.|++.|+.-| |..|+-...+...
T Consensus 177 --~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~~ 251 (293)
T 3ewb_X 177 --NPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIGERAGNTALEEVAVALHI 251 (293)
T ss_dssp --CHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCTTTCBCBHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccccccccccHhHHHHHHHHHh
Confidence 2443456677777766321 15676665 67899999999999999987 8888877666654
No 58
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.09 E-value=0.12 Score=44.97 Aligned_cols=132 Identities=17% Similarity=0.082 Sum_probs=89.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+|.++|.+.|-+--|.-+. ...++++++|+++|+.|+.=+ ++ ...|+|+...+.++ +.|
T Consensus 101 ~a~~aGvd~v~I~~~~s~~----~~~~~~i~~ak~~G~~v~~~~------~~--------a~~~~~e~~~~ia~~~~~~G 162 (345)
T 1nvm_A 101 NAYQAGARVVRVATHCTEA----DVSKQHIEYARNLGMDTVGFL------MM--------SHMIPAEKLAEQGKLMESYG 162 (345)
T ss_dssp HHHHHTCCEEEEEEETTCG----GGGHHHHHHHHHHTCEEEEEE------ES--------TTSSCHHHHHHHHHHHHHHT
T ss_pred HHHhCCcCEEEEEEeccHH----HHHHHHHHHHHHCCCEEEEEE------Ee--------CCCCCHHHHHHHHHHHHHCC
Confidence 5788999888776443333 346788999999999887654 11 13477877776654 469
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEe------------e
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKF------------N 144 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KI------------N 144 (192)
+|++.+. +|+ |.- .|.-=.++++.+++.+. .++||.+|+ ..|+.-...-.|++.|+.-| |
T Consensus 163 a~~i~l~-DT~-G~~---~P~~v~~lv~~l~~~~~-~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN 236 (345)
T 1nvm_A 163 ATCIYMA-DSG-GAM---SMNDIRDRMRAFKAVLK-PETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGN 236 (345)
T ss_dssp CSEEEEE-CTT-CCC---CHHHHHHHHHHHHHHSC-TTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCB
T ss_pred CCEEEEC-CCc-Ccc---CHHHHHHHHHHHHHhcC-CCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccCCccC
Confidence 9987765 222 221 24434566777777762 148998876 67888888999999998877 5
Q ss_pred cchHHHHHHHHHh
Q 029526 145 VNTEVRKAYMDSL 157 (192)
Q Consensus 145 i~T~l~~a~~~~~ 157 (192)
..|+...++.+..
T Consensus 237 ~~le~lv~~L~~~ 249 (345)
T 1nvm_A 237 APLEVFIAVAERL 249 (345)
T ss_dssp CBHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhc
Confidence 6677666665543
No 59
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.09 E-value=0.047 Score=48.18 Aligned_cols=134 Identities=11% Similarity=0.082 Sum_probs=87.6
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|.++||+-|=+.+++ -+++...+...++++-.++. |- .|-.-|..-... .+..
T Consensus 175 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~-~g~~--- 250 (376)
T 1icp_A 175 NAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHY-NEAG--- 250 (376)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCT-TTCC---
T ss_pred HHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecccccc-CCCC---
Confidence 6889999999998865 13688888899998888752 21 233222211000 0000
Q ss_pred ccccCCCHHHHHHHh---hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 60 YEAKLTDVNQAEEFI---DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 60 ~~~~~T~peea~~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
.-.+++++.+|+ ++.|+|+|.++-|+.+..++. + .+++.+++|++.+ ++|++.=|+- +.++..+++
T Consensus 251 ---~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~--~-~~~~~~~~vr~~~---~iPvi~~G~i--~~~~a~~~l 319 (376)
T 1icp_A 251 ---DTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEK--I-ECTESLVPMRKAY---KGTFIVAGGY--DREDGNRAL 319 (376)
T ss_dssp ---CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC---------CCCCSHHHHHHC---CSCEEEESSC--CHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCc--c-ccHHHHHHHHHHc---CCCEEEeCCC--CHHHHHHHH
Confidence 012345555554 568999999998876533321 1 2345678898888 6999988865 688999999
Q ss_pred hcC-CeEeecchHHH
Q 029526 137 ERG-VRKFNVNTEVR 150 (192)
Q Consensus 137 ~~G-i~KINi~T~l~ 150 (192)
+.| +.=|=++..+.
T Consensus 320 ~~g~aD~V~~gR~~l 334 (376)
T 1icp_A 320 IEDRADLVAYGRLFI 334 (376)
T ss_dssp HTTSCSEEEESHHHH
T ss_pred HCCCCcEEeecHHHH
Confidence 998 77888887763
No 60
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.08 E-value=0.044 Score=49.56 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=83.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++++|++.|.+|.++-.+...+...+++.+... ++.|=. | ..+++++|+.. .+.|+|+
T Consensus 244 ~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p--~~pvi~-----g-------------~~~t~e~a~~l-~~~G~d~ 302 (494)
T 1vrd_A 244 KLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYP--DLPVVA-----G-------------NVATPEGTEAL-IKAGADA 302 (494)
T ss_dssp HHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT--TSCEEE-----E-------------EECSHHHHHHH-HHTTCSE
T ss_pred HHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCC--CceEEe-----C-------------CcCCHHHHHHH-HHcCCCE
Confidence 5788999999999887655555544444444321 455521 1 13678888665 4789999
Q ss_pred EEEecCcC-CC--CC-CC-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNV-HG--KY-PS-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~-HG--~y-~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+-|+.|.- |. .+ .+ +.| .++.|.++.+..+..++|+..=||-..+ +++.+++.+|..=+.++|.+.
T Consensus 303 I~v~~~~G~~~~~~~~~~~g~p--~~~~l~~v~~~~~~~~ipvia~GGI~~~-~di~kala~GAd~V~iGr~~l 373 (494)
T 1vrd_A 303 VKVGVGPGSICTTRVVAGVGVP--QLTAVMECSEVARKYDVPIIADGGIRYS-GDIVKALAAGAESVMVGSIFA 373 (494)
T ss_dssp EEECSSCSTTCHHHHHHCCCCC--HHHHHHHHHHHHHTTTCCEEEESCCCSH-HHHHHHHHTTCSEEEESHHHH
T ss_pred EEEcCCCCccccccccCCCCcc--HHHHHHHHHHHHhhcCCCEEEECCcCCH-HHHHHHHHcCCCEEEECHHHh
Confidence 99855320 00 00 00 124 4677788877754447999998876654 569999999999999999984
No 61
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.08 E-value=0.093 Score=44.56 Aligned_cols=124 Identities=16% Similarity=0.138 Sum_probs=83.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|.++|++.|.+ ..||+|| ..++++.|+++|+.+ +=-+ ..-|+++..++..+. +-++
T Consensus 120 ~~~~aGvdGvIi--pDlp~ee----~~~~~~~~~~~gl~~---I~lv-------------ap~t~~eri~~i~~~-~~gf 176 (271)
T 3nav_A 120 RCQKAGVDSVLI--ADVPTNE----SQPFVAAAEKFGIQP---IFIA-------------PPTASDETLRAVAQL-GKGY 176 (271)
T ss_dssp HHHHHTCCEEEE--TTSCGGG----CHHHHHHHHHTTCEE---EEEE-------------CTTCCHHHHHHHHHH-CCSC
T ss_pred HHHHCCCCEEEE--CCCCHHH----HHHHHHHHHHcCCeE---EEEE-------------CCCCCHHHHHHHHHH-CCCe
Confidence 688999999877 6899987 678999999999764 1111 122556667776655 4455
Q ss_pred EEE-ec-CcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHHHHHH
Q 029526 82 LAV-CI-GNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRKAYMD 155 (192)
Q Consensus 82 LAv-ai-Gt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~a~~~ 155 (192)
+-. |. |+. |.-.. .+.--.+.|++|++.+ ++|++. |.|++ .+++++++..|..=+=|+|.+-+...+
T Consensus 177 iY~vs~~GvT-G~~~~-~~~~~~~~v~~vr~~~---~~Pv~v--GfGIst~e~~~~~~~~gADgvIVGSAiv~~i~~ 246 (271)
T 3nav_A 177 TYLLSRAGVT-GAETK-ANMPVHALLERLQQFD---APPALL--GFGISEPAQVKQAIEAGAAGAISGSAVVKIIET 246 (271)
T ss_dssp EEECCCC----------CCHHHHHHHHHHHHTT---CCCEEE--CSSCCSHHHHHHHHHTTCSEEEESHHHHHHHHH
T ss_pred EEEEeccCCC-CcccC-CchhHHHHHHHHHHhc---CCCEEE--ECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh
Confidence 443 32 322 21111 1221246678888877 699998 67884 889999999999999999999776654
No 62
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.06 E-value=0.12 Score=43.66 Aligned_cols=124 Identities=16% Similarity=0.227 Sum_probs=83.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|.++|++.|.+ ..+|+|| ..++.+.|+++|+.+ ..+- ..-|+++..++..+... ++
T Consensus 118 ~~~~aGvdgvii--~Dlp~ee----~~~~~~~~~~~gl~~----i~li------------aP~t~~eri~~i~~~~~-gf 174 (267)
T 3vnd_A 118 KAQAAGVDSVLI--ADVPVEE----SAPFSKAAKAHGIAP----IFIA------------PPNADADTLKMVSEQGE-GY 174 (267)
T ss_dssp HHHHHTCCEEEE--TTSCGGG----CHHHHHHHHHTTCEE----ECEE------------CTTCCHHHHHHHHHHCC-SC
T ss_pred HHHHcCCCEEEe--CCCCHhh----HHHHHHHHHHcCCeE----EEEE------------CCCCCHHHHHHHHHhCC-Cc
Confidence 578999999877 6789986 678999999998753 2221 12356677777766643 33
Q ss_pred EEE-e-cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHHHHHH
Q 029526 82 LAV-C-IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRKAYMD 155 (192)
Q Consensus 82 LAv-a-iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~a~~~ 155 (192)
+-. | .|+. |.-.. .+.-..+.++++++.+ ++|++. |.|++ .+++++++..|..=+=++|.+.+...+
T Consensus 175 vY~vS~~GvT-G~~~~-~~~~~~~~v~~vr~~~---~~pv~v--GfGI~~~e~~~~~~~~gADgvVVGSaiv~~i~~ 244 (267)
T 3vnd_A 175 TYLLSRAGVT-GTESK-AGEPIENILTQLAEFN---APPPLL--GFGIAEPEQVRAAIKAGAAGAISGSAVVKIIEA 244 (267)
T ss_dssp EEESCCCCCC----------CHHHHHHHHHTTT---CCCEEE--CSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred EEEEecCCCC-CCccC-CcHHHHHHHHHHHHhc---CCCEEE--ECCcCCHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 333 2 2222 11111 1222357788888876 699998 66885 899999999999999999988766654
No 63
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.04 E-value=0.05 Score=48.13 Aligned_cols=126 Identities=17% Similarity=0.250 Sum_probs=82.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.++++|.+-|-+|.++-+.++-+...+++.+ .+ ++.|=+ | .-+++++|++.. +.|+|
T Consensus 115 ~lieaGvd~I~idta~G~~~~~~~~I~~ik~---~~p~v~Vi~--G----------------~v~t~e~A~~a~-~aGAD 172 (366)
T 4fo4_A 115 ALVEAGVDVLLIDSSHGHSEGVLQRIRETRA---AYPHLEIIG--G----------------NVATAEGARALI-EAGVS 172 (366)
T ss_dssp HHHHTTCSEEEEECSCTTSHHHHHHHHHHHH---HCTTCEEEE--E----------------EECSHHHHHHHH-HHTCS
T ss_pred HHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH---hcCCCceEe--e----------------eeCCHHHHHHHH-HcCCC
Confidence 4788999999999988765544433333322 22 444322 1 136889998855 77999
Q ss_pred EEEEecC--cCCCC-CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 81 ALAVCIG--NVHGK-YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 81 ~LAvaiG--t~HG~-y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+|-+.+| +.++. ...+...-+++.|.++.+..+..++|++-=||-..+ +++.+++.+|..=|-++|.+.
T Consensus 173 ~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~-~di~kala~GAd~V~vGs~f~ 244 (366)
T 4fo4_A 173 AVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFS-GDISKAIAAGASCVMVGSMFA 244 (366)
T ss_dssp EEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSH-HHHHHHHHTTCSEEEESTTTT
T ss_pred EEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCH-HHHHHHHHcCCCEEEEChHhh
Confidence 9998432 22211 000011125777888887654457999999966555 559999999999999999874
No 64
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=96.04 E-value=0.037 Score=45.30 Aligned_cols=77 Identities=13% Similarity=0.201 Sum_probs=59.3
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
+|.+..+.+++.|+|+|-+.--+.-+.+ ...+++.+++|++.+ ++|+..=||-..+ +++.++.+.|+..|-+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~----~~~~~~~i~~i~~~~---~ipvi~~Ggi~~~-~~~~~~l~~Gad~V~i 107 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTK----SGYDTEMIRFVRPLT---TLPIIASGGAGKM-EHFLEAFLRGADKVSI 107 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCS----SCCCHHHHHHHGGGC---CSCEEEESCCCSH-HHHHHHHHTTCSEECC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCC----CcccHHHHHHHHHhC---CCCEEEeCCCCCH-HHHHHHHHcCCCeeeh
Confidence 5666666667899999987644433322 234789999999887 6999999987755 5699999999999999
Q ss_pred chHHH
Q 029526 146 NTEVR 150 (192)
Q Consensus 146 ~T~l~ 150 (192)
+|.+.
T Consensus 108 g~~~l 112 (247)
T 3tdn_A 108 NTAAV 112 (247)
T ss_dssp SHHHH
T ss_pred hhHHh
Confidence 99864
No 65
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=95.99 E-value=0.42 Score=37.50 Aligned_cols=141 Identities=18% Similarity=0.221 Sum_probs=93.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEe--------cc----ccccCCCCCccc-----c--ccc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAE--------LG----RLSGTEDGLTVE-----D--YEA 62 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaE--------lG----~i~g~e~~~~~~-----~--~~~ 62 (192)
.++++|.+.|-++-...+.++-.+..+++.++++.+++.|-.. .| +++......... . ..-
T Consensus 34 ~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~~~~a~~~gad~v~l~~~~~~~~~~~~~~~~~~~~v 113 (215)
T 1xi3_A 34 EALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPEDMPIEVAKEIAPNLIIGA 113 (215)
T ss_dssp HHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSEEEECTTSCCHHHHHHHCTTSEEEE
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCeEEEcChHHHHHHcCCCEEEECCccCCHHHHHHhCCCCEEEE
Confidence 4678999999998777788777777788888888877755432 11 122111100000 0 001
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCC-CCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVH-GKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~H-G~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
..++|+++.+. .+.|+|.+-+. ++. +.-+++.+..+++.++++++.+ ++|++.=| |+..++++++.+.|+.
T Consensus 114 ~~~t~~e~~~~-~~~g~d~i~~~--~~~~~~~~~~~~~~~~~~l~~l~~~~---~~pvia~G--GI~~~nv~~~~~~Ga~ 185 (215)
T 1xi3_A 114 SVYSLEEALEA-EKKGADYLGAG--SVFPTKTKEDARVIGLEGLRKIVESV---KIPVVAIG--GINKDNAREVLKTGVD 185 (215)
T ss_dssp EESSHHHHHHH-HHHTCSEEEEE--CSSCC----CCCCCHHHHHHHHHHHC---SSCEEEES--SCCTTTHHHHHTTTCS
T ss_pred ecCCHHHHHHH-HhcCCCEEEEc--CCccCCCCCCCCCcCHHHHHHHHHhC---CCCEEEEC--CcCHHHHHHHHHcCCC
Confidence 13688888764 56799998764 111 0001112457899999998876 69999977 5557889999999999
Q ss_pred EeecchHHH
Q 029526 142 KFNVNTEVR 150 (192)
Q Consensus 142 KINi~T~l~ 150 (192)
-|=++|.+.
T Consensus 186 gv~vgs~i~ 194 (215)
T 1xi3_A 186 GIAVISAVM 194 (215)
T ss_dssp EEEESHHHH
T ss_pred EEEEhHHHh
Confidence 999999885
No 66
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=95.95 E-value=0.043 Score=44.62 Aligned_cols=131 Identities=14% Similarity=0.094 Sum_probs=80.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
+++++|.+.|++....++- .....++.+... ...+++..-.|.|.- .+ +. +..- ++.+..+-+++.|+|
T Consensus 92 ~~l~~Gad~V~lg~~~l~~---p~~~~~~~~~~g~~~~~~l~~~~g~v~~-~g----~~-~~~~-~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 92 AALATGCTRVNLGTAALET---PEWVAKVIAEHGDKIAVGLDVRGTTLRG-RG----WT-RDGG-DLYETLDRLNKEGCA 161 (244)
T ss_dssp HHHHTTCSEEEECHHHHHC---HHHHHHHHHHHGGGEEEEEEEETTEECC-SS----SC-CCCC-BHHHHHHHHHHTTCC
T ss_pred HHHHcCCCEEEECchHhhC---HHHHHHHHHHcCCcEEEEEEccCCEEEE-cC----cc-cCCC-CHHHHHHHHHhCCCC
Confidence 4788999999998765542 223333333322 223455554444421 11 11 1111 555654556678999
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc---CCeEeecchHHH
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER---GVRKFNVNTEVR 150 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~---Gi~KINi~T~l~ 150 (192)
.+-+.-.+--|.+ ...|++.+++|++.+ ++|++-=||-..+ ++++++.+. |+.=+=++|.+.
T Consensus 162 ~i~~~~~~~~~~~----~g~~~~~~~~i~~~~---~ipvia~GGI~~~-~d~~~~~~~~~~Gadgv~vG~al~ 226 (244)
T 1vzw_A 162 RYVVTDIAKDGTL----QGPNLELLKNVCAAT---DRPVVASGGVSSL-DDLRAIAGLVPAGVEGAIVGKALY 226 (244)
T ss_dssp CEEEEEC-----------CCCHHHHHHHHHTC---SSCEEEESCCCSH-HHHHHHHTTGGGTEEEEEECHHHH
T ss_pred EEEEeccCccccc----CCCCHHHHHHHHHhc---CCCEEEECCCCCH-HHHHHHHhhccCCCceeeeeHHHH
Confidence 8877533322322 235999999999887 6999988744433 779999998 999999999885
No 67
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=95.94 E-value=0.19 Score=44.24 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=79.4
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|++|+.. .+.|+|.+.|+-..-|..+. ..-.++.|.+|++.+.. ++|++.=||--.+.+ +.+++.+|..=|-
T Consensus 238 ~~~e~a~~a-~~~Gad~I~vs~~ggr~~~~---g~~~~~~l~~v~~~v~~-~ipVia~GGI~~g~D-~~kalalGAd~V~ 311 (368)
T 2nli_A 238 QHPEDADMA-IKRGASGIWVSNHGARQLYE---APGSFDTLPAIAERVNK-RVPIVFDSGVRRGEH-VAKALASGADVVA 311 (368)
T ss_dssp CSHHHHHHH-HHTTCSEEEECCGGGTSCSS---CCCHHHHHHHHHHHHTT-SSCEEECSSCCSHHH-HHHHHHTTCSEEE
T ss_pred CCHHHHHHH-HHcCCCEEEEcCCCcCCCCC---CCChHHHHHHHHHHhCC-CCeEEEECCCCCHHH-HHHHHHcCCCEEE
Confidence 678888874 58899999986422222222 22367889999988742 499999998876655 8888899999999
Q ss_pred cchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 145 VNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 145 i~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
+++.+..+....= ..-.....+.+++.++..|.+.|..
T Consensus 312 iGr~~l~~~~~~G-------~~gv~~~l~~l~~el~~~m~~~G~~ 349 (368)
T 2nli_A 312 LGRPVLFGLALGG-------WQGAYSVLDYFQKDLTRVMQLTGSQ 349 (368)
T ss_dssp ECHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ECHHHHHHHHhcC-------hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999876643210 1123445677788888888888864
No 68
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=95.92 E-value=0.16 Score=45.12 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=79.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.++++|+.. .+.|+|.+.|+- ||........-.++.|.++++.++. ++|+..=||--.+.| +.+++.+|..=|.
T Consensus 261 ~~~e~A~~a-~~aGad~I~vs~---~ggr~~~~g~~~~~~l~~v~~av~~-~ipVia~GGI~~g~D-v~kalalGAd~V~ 334 (392)
T 2nzl_A 261 LRGDDAREA-VKHGLNGILVSN---HGARQLDGVPATIDVLPEIVEAVEG-KVEVFLDGGVRKGTD-VLKALALGAKAVF 334 (392)
T ss_dssp CCHHHHHHH-HHTTCCEEEECC---GGGTSSTTCCCHHHHHHHHHHHHTT-SSEEEECSSCCSHHH-HHHHHHTTCSEEE
T ss_pred CCHHHHHHH-HHcCCCEEEeCC---CCCCcCCCCcChHHHHHHHHHHcCC-CCEEEEECCCCCHHH-HHHHHHhCCCeeE
Confidence 578888874 578999999863 5532111123467889999888742 499999998776655 8888899999999
Q ss_pred cchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 145 VNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 145 i~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
+++.+..+....- ..-.....+.+++.++..|.+.|..
T Consensus 335 iGr~~l~~~~~~g-------~~gv~~~l~~l~~el~~~m~~~G~~ 372 (392)
T 2nzl_A 335 VGRPIVWGLAFQG-------EKGVQDVLEILKEEFRLAMALSGCQ 372 (392)
T ss_dssp ECHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ECHHHHHHHHhcC-------hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999877643210 1123345677888888888888864
No 69
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.90 E-value=0.094 Score=46.97 Aligned_cols=125 Identities=15% Similarity=0.147 Sum_probs=80.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHh-CCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHS-KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~-~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.++++|-+-|-+|.++-.-+.. .++++..++ +++.|=+ | ..+++++|+.. .+.|+|
T Consensus 151 ~lveaGvdvIvldta~G~~~~~----~e~I~~ik~~~~i~Vi~--g----------------~V~t~e~A~~a-~~aGAD 207 (400)
T 3ffs_A 151 LLVEAGVDVIVLDSAHGHSLNI----IRTLKEIKSKMNIDVIV--G----------------NVVTEEATKEL-IENGAD 207 (400)
T ss_dssp HHHHHTCSEEEECCSCCSBHHH----HHHHHHHHTTCCCEEEE--E----------------EECSHHHHHHH-HHTTCS
T ss_pred HHHHcCCCEEEEeCCCCCcccH----HHHHHHHHhcCCCeEEE--e----------------ecCCHHHHHHH-HHcCCC
Confidence 4678999999999887522221 233333333 3665532 1 12678888884 578999
Q ss_pred EEEEecCcC--CCCC-CCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 81 ALAVCIGNV--HGKY-PSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 81 ~LAvaiGt~--HG~y-~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
++-+.+|-- |+.- ..+...-+++.|.++.+..+..++|++-=||-.. .+++.+++.+|..=|-++|.|.
T Consensus 208 ~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~-~~di~kalalGAd~V~vGt~f~ 279 (400)
T 3ffs_A 208 GIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRY-SGDIGKALAVGASSVMIGSILA 279 (400)
T ss_dssp EEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCS-HHHHHHHHTTTCSEEEECGGGT
T ss_pred EEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCC-HHHHHHHHHcCCCEEEEChHHh
Confidence 999854322 2110 0000112578888888776545799999996554 4669999999999999999884
No 70
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=95.90 E-value=0.087 Score=46.56 Aligned_cols=122 Identities=16% Similarity=0.208 Sum_probs=83.8
Q ss_pred hhhhcCCCEeE-eeCCCC--------CHHHHHHHHHHHHHHHHhCC--CeEEEeccccccCCCCCccccccccCCCHHHH
Q 029526 2 EAIVLGFDSLM-VDGSHL--------PFKDNISHTKYISFLAHSKG--MLVEAELGRLSGTEDGLTVEDYEAKLTDVNQA 70 (192)
Q Consensus 2 ~ai~~GFtSVM-~D~S~l--------~~eeNi~~Tk~vv~~Ah~~g--v~VEaElG~i~g~e~~~~~~~~~~~~T~peea 70 (192)
+|+++|.+.|- |++++- +.+|+++..++.+++|+++| +.|+.-+ +|. ..++|+.+
T Consensus 82 ~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~--------~~~~~~~~ 147 (382)
T 2ztj_A 82 VAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDT--------FRSEEQDL 147 (382)
T ss_dssp HHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTT--------TTSCHHHH
T ss_pred HHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeC--------CCCCHHHH
Confidence 57788887654 454432 68999999999999999999 6665332 221 35788877
Q ss_pred HHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEee
Q 029526 71 EEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 71 ~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KIN 144 (192)
.++++ +. +|.+.++ -.=|.- .|.-=.++++.|++.++ .++||-+|+ ..|+.-...-.|++.|+.-|+
T Consensus 148 ~~~~~~~~~~-a~~i~l~--DT~G~~---~P~~~~~lv~~l~~~~~-~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd 219 (382)
T 2ztj_A 148 LAVYEAVAPY-VDRVGLA--DTVGVA---TPRQVYALVREVRRVVG-PRVDIEFHGHNDTGCAIANAYEAIEAGATHVD 219 (382)
T ss_dssp HHHHHHHGGG-CSEEEEE--ETTSCC---CHHHHHHHHHHHHHHHT-TTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHh-cCEEEec--CCCCCC---CHHHHHHHHHHHHHhcC-CCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 76654 45 7876653 222321 25444677788887631 157887775 789999999999999999885
No 71
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=95.78 E-value=0.019 Score=49.91 Aligned_cols=136 Identities=19% Similarity=0.097 Sum_probs=94.9
Q ss_pred hhhhc----CCCEeEe-eCCC---------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCH
Q 029526 2 EAIVL----GFDSLMV-DGSH---------LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDV 67 (192)
Q Consensus 2 ~ai~~----GFtSVM~-D~S~---------l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~p 67 (192)
+|+++ |.+-|-+ ++.+ .+.+|+++..++++++|++.|..|+ . +.++. ..++|
T Consensus 85 ~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~--f----~~~d~--------~~~~~ 150 (325)
T 3eeg_A 85 IAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE--F----FCEDA--------GRADQ 150 (325)
T ss_dssp HHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE--E----EEETG--------GGSCH
T ss_pred HHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE--E----Ecccc--------ccchH
Confidence 35556 7766643 3322 2457888888999999999998874 2 22221 35889
Q ss_pred HHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccC-CccEEeec--CCCCCHHHHHHHHhcCCe
Q 029526 68 NQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKK-GVLLVLHG--ASGLSAELIKGCIERGVR 141 (192)
Q Consensus 68 eea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~-~iPLVlHG--gSG~~~e~~~~~i~~Gi~ 141 (192)
+.+.++++ +.|+|.+. +.-.=|.- .|.-=.++++.+++.+... ++||-+|+ ..|+.-...-.|++.|+.
T Consensus 151 ~~~~~~~~~~~~~G~~~i~--l~DT~G~~---~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~ 225 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVN--IPDTTGYM---LPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGAR 225 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEE--CCBSSSCC---CHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhcCCCEEE--ecCccCCc---CHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 88877765 46999754 55554543 2544456777787776310 18888887 889999999999999999
Q ss_pred Ee------------ecchHHHHHHHHH
Q 029526 142 KF------------NVNTEVRKAYMDS 156 (192)
Q Consensus 142 KI------------Ni~T~l~~a~~~~ 156 (192)
-| |..|+-...+.+.
T Consensus 226 ~vd~tv~GlGer~GN~~lE~vv~~L~~ 252 (325)
T 3eeg_A 226 QVECTINGIGERAGNTALEEVVMAMEC 252 (325)
T ss_dssp EEEEBGGGCCSTTCCCBHHHHHHHHHH
T ss_pred EEEEecccccccccchhHHHHHHHHHh
Confidence 98 7888877777664
No 72
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=95.76 E-value=0.056 Score=47.83 Aligned_cols=131 Identities=17% Similarity=0.153 Sum_probs=90.4
Q ss_pred cCCCEeE-eeCCC---------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh
Q 029526 6 LGFDSLM-VDGSH---------LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID 75 (192)
Q Consensus 6 ~GFtSVM-~D~S~---------l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~ 75 (192)
+|...|- |++++ .+.+|+++..++++++|+.+|..|+ . +.|| ...++|+.+.++++
T Consensus 99 ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~--~----~~ed--------~~r~~~~~~~~~~~ 164 (370)
T 3rmj_A 99 APKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVE--F----SCED--------ALRSEIDFLAEICG 164 (370)
T ss_dssp SSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEE--E----EEET--------GGGSCHHHHHHHHH
T ss_pred CCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEE--E----ecCC--------CCccCHHHHHHHHH
Confidence 6776663 44332 3679999999999999999998764 1 1222 13588988877765
Q ss_pred ---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccC-CccEEeec--CCCCCHHHHHHHHhcCCeEe------
Q 029526 76 ---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKK-GVLLVLHG--ASGLSAELIKGCIERGVRKF------ 143 (192)
Q Consensus 76 ---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~-~iPLVlHG--gSG~~~e~~~~~i~~Gi~KI------ 143 (192)
+.|+|.+.++ -.=|.- .|.-=.++++.+++.+... ++||-+|. ..|+.-...-.|++.|+.-|
T Consensus 165 ~~~~~Ga~~i~l~--DT~G~~---~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~G 239 (370)
T 3rmj_A 165 AVIEAGATTINIP--DTVGYS---IPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNG 239 (370)
T ss_dssp HHHHHTCCEEEEE--CSSSCC---CHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred HHHHcCCCEEEec--CccCCc---CHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccc
Confidence 5799987654 333322 2544456777787776310 17888777 88999999999999999998
Q ss_pred ------ecchHHHHHHHH
Q 029526 144 ------NVNTEVRKAYMD 155 (192)
Q Consensus 144 ------Ni~T~l~~a~~~ 155 (192)
|..|+-...+..
T Consensus 240 lGeraGN~~lE~vv~~L~ 257 (370)
T 3rmj_A 240 LGERAGNASVEEIVMALK 257 (370)
T ss_dssp CSSTTCBCBHHHHHHHHH
T ss_pred cCcccccccHHHHHHHHH
Confidence 667776554443
No 73
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=95.74 E-value=0.47 Score=38.40 Aligned_cols=121 Identities=20% Similarity=0.199 Sum_probs=74.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc-
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID- 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD- 80 (192)
.|+++|.+.|.+. .+|.+ + .+++.++++++|..+=- +. +..|..+.++.+.+. +|
T Consensus 103 ~~~~~Gad~v~~~--~~~~~-~---~~~~~~~~~~~g~~~~~------~i----------~~~t~~e~~~~~~~~--~d~ 158 (248)
T 1geq_A 103 EAKASGVDGILVV--DLPVF-H---AKEFTEIAREEGIKTVF------LA----------APNTPDERLKVIDDM--TTG 158 (248)
T ss_dssp HHHHHTCCEEEET--TCCGG-G---HHHHHHHHHHHTCEEEE------EE----------CTTCCHHHHHHHHHH--CSS
T ss_pred HHHHCCCCEEEEC--CCChh-h---HHHHHHHHHHhCCCeEE------EE----------CCCCHHHHHHHHHhc--CCC
Confidence 4778999999994 45553 3 45778888887753321 10 012334444444433 45
Q ss_pred EEEEecCcCCCCCCCC--CCCCCHHHHHHHHhhhccCCccEEeecCCCCCH-HHHHHHHhcCCeEeecchHHHHHH
Q 029526 81 ALAVCIGNVHGKYPSS--GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSA-ELIKGCIERGVRKFNVNTEVRKAY 153 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~--~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~-e~~~~~i~~Gi~KINi~T~l~~a~ 153 (192)
++-+ ++.-|..... .+...++.++++++.+ ++|++.=| |+.. ++++++.+.|+.-+-++|.+..+.
T Consensus 159 ~i~~--~~~~G~~g~~~~~~~~~~~~i~~l~~~~---~~pi~~~G--GI~~~e~i~~~~~~Gad~vivGsai~~~~ 227 (248)
T 1geq_A 159 FVYL--VSLYGTTGAREEIPKTAYDLLRRAKRIC---RNKVAVGF--GVSKREHVVSLLKEGANGVVVGSALVKII 227 (248)
T ss_dssp EEEE--ECCC-------CCCHHHHHHHHHHHHHC---SSCEEEES--CCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred eEEE--EECCccCCCCCCCChhHHHHHHHHHhhc---CCCEEEEe--ecCCHHHHHHHHHcCCCEEEEcHHHHhhH
Confidence 4433 2223322110 1223466788888776 69988766 6666 889999999999999999997764
No 74
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.71 E-value=0.21 Score=41.26 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=76.3
Q ss_pred hhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEE
Q 029526 3 AIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDAL 82 (192)
Q Consensus 3 ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~L 82 (192)
|.++|.+.|.+ ..+|++ ..+++++.++++|+.+ ..+. +.-|+++..+...+. +.+++
T Consensus 114 a~~aGadgv~v--~d~~~~----~~~~~~~~~~~~g~~~----i~~~------------a~~t~~e~~~~~~~~-~~g~v 170 (262)
T 1rd5_A 114 MKEAGVHGLIV--PDLPYV----AAHSLWSEAKNNNLEL----VLLT------------TPAIPEDRMKEITKA-SEGFV 170 (262)
T ss_dssp HHHTTCCEEEC--TTCBTT----THHHHHHHHHHTTCEE----CEEE------------CTTSCHHHHHHHHHH-CCSCE
T ss_pred HHHcCCCEEEE--cCCChh----hHHHHHHHHHHcCCce----EEEE------------CCCCCHHHHHHHHhc-CCCeE
Confidence 77889987776 355554 3667888888887542 1111 122555555555443 33444
Q ss_pred EEecCcCCCCCCCC---CCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHHHH
Q 029526 83 AVCIGNVHGKYPSS---GPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRKAY 153 (192)
Q Consensus 83 AvaiGt~HG~y~~~---~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~a~ 153 (192)
-+ +++-| |.+. .+...++.++++++.+ ++|++. +.|+. .++++++.+.|..=+-++|.+..+.
T Consensus 171 ~~--~s~~G-~tG~~~~~~~~~~~~i~~v~~~~---~~pI~v--gGGI~~~e~~~~~~~~GAdgvvVGSai~~~~ 237 (262)
T 1rd5_A 171 YL--VSVNG-VTGPRANVNPRVESLIQEVKKVT---NKPVAV--GFGISKPEHVKQIAQWGADGVIIGSAMVRQL 237 (262)
T ss_dssp EE--ECSSC-CBCTTSCBCTHHHHHHHHHHHHC---SSCEEE--ESCCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred EE--ecCCC-CCCCCcCCCchHHHHHHHHHhhc---CCeEEE--ECCcCCHHHHHHHHHcCCCEEEEChHHHhHH
Confidence 22 22212 2211 1222345778888776 699987 56888 8999999999999999999997665
No 75
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.67 E-value=0.13 Score=46.98 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=83.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+.+++|++-|-+|.++-..+..+...+++.+... ++.|=+ | ..+++++|+..+ +.|+|+
T Consensus 238 ~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p--~~~Vi~--g----------------~v~t~e~a~~l~-~aGaD~ 296 (496)
T 4fxs_A 238 ALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP--HLEIIG--G----------------NVATAEGARALI-EAGVSA 296 (496)
T ss_dssp HHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT--TCCEEE--E----------------EECSHHHHHHHH-HHTCSE
T ss_pred HHHhccCceEEeccccccchHHHHHHHHHHHHCC--CceEEE--c----------------ccCcHHHHHHHH-HhCCCE
Confidence 4678999999999998544444433344333221 344333 1 136778887754 789999
Q ss_pred EEEecCcC--CCCCC-CCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNV--HGKYP-SSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~--HG~y~-~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+-|++|-- |+.-. .+...-++..+.++.+.++..++|++-=||-..| +++.+++..|..=+-++|.+.
T Consensus 297 I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~-~di~kala~GAd~V~iGs~f~ 367 (496)
T 4fxs_A 297 VKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFS-GDISKAIAAGASCVMVGSMFA 367 (496)
T ss_dssp EEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSH-HHHHHHHHTTCSEEEESTTTT
T ss_pred EEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCH-HHHHHHHHcCCCeEEecHHHh
Confidence 99876532 11100 0011236788888888765557999999987765 559999999999999998873
No 76
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=95.65 E-value=0.27 Score=43.03 Aligned_cols=112 Identities=12% Similarity=0.061 Sum_probs=77.7
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|++|+.. .+.|+|.+-|+- ||........-+++.|.++++.+.. ++|++.=||-..+ +++.+++.+|..=+.
T Consensus 234 ~~~e~a~~a-~~~Gad~I~vs~---~ggr~~~~~~~~~~~l~~v~~~~~~-~ipvia~GGI~~~-~D~~k~l~~GAdaV~ 307 (370)
T 1gox_A 234 ITAEDARLA-VQHGAAGIIVSN---HGARQLDYVPATIMALEEVVKAAQG-RIPVFLDGGVRRG-TDVFKALALGAAGVF 307 (370)
T ss_dssp CSHHHHHHH-HHTTCSEEEECC---GGGTSSTTCCCHHHHHHHHHHHTTT-SSCEEEESSCCSH-HHHHHHHHHTCSEEE
T ss_pred CCHHHHHHH-HHcCCCEEEECC---CCCccCCCcccHHHHHHHHHHHhCC-CCEEEEECCCCCH-HHHHHHHHcCCCEEe
Confidence 568888775 477999998852 5432111233478889999887732 4999988876654 468899999999999
Q ss_pred cchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 145 VNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 145 i~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
+++.+..+.... . ..-.....+.+.+.++..|...|..
T Consensus 308 iGr~~l~~~~~~------G-~~gv~~~~~~l~~el~~~m~~~G~~ 345 (370)
T 1gox_A 308 IGRPVVFSLAAE------G-EAGVKKVLQMMRDEFELTMALSGCR 345 (370)
T ss_dssp ECHHHHHHHHHH------H-HHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ecHHHHHHHhhc------c-HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999987654211 0 1123345577778888888888864
No 77
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.65 E-value=0.46 Score=39.66 Aligned_cols=125 Identities=13% Similarity=0.135 Sum_probs=79.2
Q ss_pred cCCCEeEeeCCC-------CCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh
Q 029526 6 LGFDSLMVDGSH-------LPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET 77 (192)
Q Consensus 6 ~GFtSVM~D~S~-------l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T 77 (192)
+||+-|-+.-|. ..|-.+.+...++++..++. +++|=.=+. ...+++.+..+-+++.
T Consensus 124 ~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~---------------~~~~~~~~~a~~l~~~ 188 (311)
T 1ep3_A 124 ANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLS---------------PNVTDIVPIAKAVEAA 188 (311)
T ss_dssp TTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEEC---------------SCSSCSHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEEC---------------CChHHHHHHHHHHHHc
Confidence 788877776552 22334556667777776654 555521111 0135666755567789
Q ss_pred CCcEEEEecCc----CCCC------------CCCCCCC---CCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc
Q 029526 78 DIDALAVCIGN----VHGK------------YPSSGPN---LKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER 138 (192)
Q Consensus 78 gvD~LAvaiGt----~HG~------------y~~~~p~---ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~ 138 (192)
|+|.|-++-+. .|+. |.+ +. +.++.+++|++.+ ++|++.=||-. +.+++.++++.
T Consensus 189 G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g--~~~~~~~~~~i~~i~~~~---~ipvia~GGI~-~~~d~~~~l~~ 262 (311)
T 1ep3_A 189 GADGLTMINTLMGVRFDLKTRQPILANITGGLSG--PAIKPVALKLIHQVAQDV---DIPIIGMGGVA-NAQDVLEMYMA 262 (311)
T ss_dssp TCSEEEECCCEEECCBCTTTCSBSSTTSCEEEES--GGGHHHHHHHHHHHHTTC---SSCEEECSSCC-SHHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCcccCCccccCCCCcccC--ccchHHHHHHHHHHHHhc---CCCEEEECCcC-CHHHHHHHHHc
Confidence 99999985311 1321 221 21 1257778888776 69999777443 46789999999
Q ss_pred CCeEeecchHHHH
Q 029526 139 GVRKFNVNTEVRK 151 (192)
Q Consensus 139 Gi~KINi~T~l~~ 151 (192)
|..-|-++|.+..
T Consensus 263 GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 263 GASAVAVGTANFA 275 (311)
T ss_dssp TCSEEEECTHHHH
T ss_pred CCCEEEECHHHHc
Confidence 9999999999853
No 78
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=95.64 E-value=0.31 Score=38.96 Aligned_cols=141 Identities=12% Similarity=0.119 Sum_probs=89.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEec------c----ccccCCCCCcc------c-ccccc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK-GMLVEAEL------G----RLSGTEDGLTV------E-DYEAK 63 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~-gv~VEaEl------G----~i~g~e~~~~~------~-~~~~~ 63 (192)
+++++|.+.|-+|--.+++++..+..+++.+.+..+ .+.|...+ | ++++....... . .....
T Consensus 37 ~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v~~~~~~a~~~gad~v~l~~~~~~~~~~~~~~~~~~ig~s 116 (221)
T 1yad_A 37 ITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVMNGRVDIALFSTIHRVQLPSGSFSPKQIRARFPHLHIGRS 116 (221)
T ss_dssp HHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHTTTCCEEEECTTSCCHHHHHHHCTTCEEEEE
T ss_pred HHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEEeChHHHHHHcCCCEEEeCCCccCHHHHHHHCCCCEEEEE
Confidence 467889999999988889998888888887654322 23344111 1 12211110000 0 00112
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCC-CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGK-YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~-y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
..+++++++.. +.|+|++.+ |++.+. .+++.+.++++.++++++.+ ++|++.=||- ..++++++++.|..=
T Consensus 117 v~t~~~~~~a~-~~gaD~i~~--~~~f~~~~~~g~~~~~~~~l~~~~~~~---~~pvia~GGI--~~~nv~~~~~~Ga~g 188 (221)
T 1yad_A 117 VHSLEEAVQAE-KEDADYVLF--GHVFETDCKKGLEGRGVSLLSDIKQRI---SIPVIAIGGM--TPDRLRDVKQAGADG 188 (221)
T ss_dssp ECSHHHHHHHH-HTTCSEEEE--ECCC----------CHHHHHHHHHHHC---CSCEEEESSC--CGGGHHHHHHTTCSE
T ss_pred cCCHHHHHHHH-hCCCCEEEE--CCccccCCCCCCCCCCHHHHHHHHHhC---CCCEEEECCC--CHHHHHHHHHcCCCE
Confidence 36899987754 689998866 444221 11112457889999998776 6999998855 788999999999999
Q ss_pred eecchHHH
Q 029526 143 FNVNTEVR 150 (192)
Q Consensus 143 INi~T~l~ 150 (192)
|=++|.+.
T Consensus 189 v~vgs~i~ 196 (221)
T 1yad_A 189 IAVMSGIF 196 (221)
T ss_dssp EEESHHHH
T ss_pred EEEhHHhh
Confidence 99999885
No 79
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=95.64 E-value=0.54 Score=39.30 Aligned_cols=123 Identities=15% Similarity=0.074 Sum_probs=82.9
Q ss_pred hhhhcCCCEeEe-e--CCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHhh
Q 029526 2 EAIVLGFDSLMV-D--GSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFID 75 (192)
Q Consensus 2 ~ai~~GFtSVM~-D--~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv~ 75 (192)
+|++.|.+-|-+ . + ..+.++-++..+++++.||.+|+.|=.| -...|.. .. ..+ ++++.. +-..
T Consensus 100 ~Ai~~Ga~~v~~~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~-~~~~G~~--~~-----~~~-s~~~i~~a~~~a~ 169 (263)
T 1w8s_A 100 EAVSLGASAVGYTIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVE-SFPRGGK--VV-----NET-APEIVAYAARIAL 169 (263)
T ss_dssp HHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEE-ECCCSTT--CC-----CTT-CHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEE-eeCCCCc--cc-----cCC-CHHHHHHHHHHHH
Confidence 689999988733 3 4 4678999999999999999999876444 1222221 10 112 455443 3456
Q ss_pred hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCc-cEEeecCCCC-CHHHHHHH----HhcCCeEeecchHH
Q 029526 76 ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGV-LLVLHGASGL-SAELIKGC----IERGVRKFNVNTEV 149 (192)
Q Consensus 76 ~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~i-PLVlHGgSG~-~~e~~~~~----i~~Gi~KINi~T~l 149 (192)
+.|+|++-+++ +. +++.++++.+.+ ++ |++.=||... +.+++.+. ++.|..=+=++..+
T Consensus 170 ~~GAD~vkt~~-------~~-----~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 170 ELGADAMKIKY-------TG-----DPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHTCSEEEEEC-------CS-----SHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HcCCCEEEEcC-------CC-----CHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 78999998883 21 578889888877 45 9999998875 45555544 48998744444443
No 80
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=95.61 E-value=0.21 Score=43.98 Aligned_cols=110 Identities=12% Similarity=0.116 Sum_probs=78.0
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|++|+... +.|+|.+.|+ -||.-......-+++.|.++++.+ ++|+..=||-..+ +++.+++.+|..=+-
T Consensus 234 ~t~e~a~~a~-~aGad~I~vs---~~gg~~~d~~~~~~~~l~~v~~~~---~~pVia~GGI~~~-~dv~kal~~GAdaV~ 305 (380)
T 1p4c_A 234 LSAEDADRCI-AEGADGVILS---NHGGRQLDCAISPMEVLAQSVAKT---GKPVLIDSGFRRG-SDIVKALALGAEAVL 305 (380)
T ss_dssp CCHHHHHHHH-HTTCSEEEEC---CGGGTSCTTCCCGGGTHHHHHHHH---CSCEEECSSCCSH-HHHHHHHHTTCSCEE
T ss_pred CcHHHHHHHH-HcCCCEEEEc---CCCCCcCCCCcCHHHHHHHHHHHc---CCeEEEECCCCCH-HHHHHHHHhCCcHhh
Confidence 5788888755 6899999884 254311111223788899999888 5799988876655 468899999999999
Q ss_pred cchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 145 VNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 145 i~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
+++.+....... . ..-+....+.+.+.++..|...|..
T Consensus 306 iGr~~l~~~~~~------g-~~~v~~~~~~l~~el~~~m~~~G~~ 343 (380)
T 1p4c_A 306 LGRATLYGLAAR------G-ETGVDEVLTLLKADIDRTLAQIGCP 343 (380)
T ss_dssp ESHHHHHHHHHH------H-HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ehHHHHHHHHhc------C-HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999997654211 0 1223455677888888889888864
No 81
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.60 E-value=0.029 Score=45.03 Aligned_cols=78 Identities=18% Similarity=0.132 Sum_probs=59.7
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.++.+..+.+++.|+|+|-+.--+.++ + ....+++.+++|++.+ ++|+..||+-..+ ++++++.+.|+..|.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~-~---~~~~~~~~i~~i~~~~---~ipvi~~g~i~~~-~~~~~~~~~Gad~V~ 104 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP-E---GRATFIDSVKRVAEAV---SIPVLVGGGVRSL-EDATTLFRAGADKVS 104 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT-T---THHHHHHHHHHHHHHC---SSCEEEESSCCSH-HHHHHHHHHTCSEEE
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc-c---CCcccHHHHHHHHHhc---CCCEEEECCCCCH-HHHHHHHHcCCCEEE
Confidence 366666677788999999988655543 1 1224677888888877 6999999987654 568999999999999
Q ss_pred cchHHH
Q 029526 145 VNTEVR 150 (192)
Q Consensus 145 i~T~l~ 150 (192)
+++.+.
T Consensus 105 i~~~~~ 110 (253)
T 1h5y_A 105 VNTAAV 110 (253)
T ss_dssp ESHHHH
T ss_pred EChHHh
Confidence 998764
No 82
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=95.59 E-value=0.1 Score=47.05 Aligned_cols=122 Identities=19% Similarity=0.248 Sum_probs=84.3
Q ss_pred hhhhcCCCEeEe--eCCC--------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMV--DGSH--------LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~--D~S~--------l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+|+++|.+.|-+ -.|. .+.++.++...+++++|+++|..|+..+ +| ..-++|+.+.
T Consensus 118 ~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~------ed--------a~r~d~~~~~ 183 (423)
T 3ivs_A 118 VAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS------ED--------SFRSDLVDLL 183 (423)
T ss_dssp HHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEE------ES--------GGGSCHHHHH
T ss_pred HHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE------cc--------CcCCCHHHHH
Confidence 578888876654 3442 2467778888999999999999887542 22 1347888777
Q ss_pred HHh---hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEeec
Q 029526 72 EFI---DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 72 ~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KINi 145 (192)
+++ .+.|+|.+.++ -.=|.- .|.-=.++++.+++.. ++||-+|. ..|+.-...-.|++.|+.-|+.
T Consensus 184 ~v~~~~~~~Ga~~i~l~--DTvG~~---~P~~v~~lv~~l~~~~---~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ 254 (423)
T 3ivs_A 184 SLYKAVDKIGVNRVGIA--DTVGCA---TPRQVYDLIRTLRGVV---SCDIECHFHNDTGMAIANAYCALEAGATHIDT 254 (423)
T ss_dssp HHHHHHHHHCCSEEEEE--ETTSCC---CHHHHHHHHHHHHHHC---SSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCccccC--CccCcC---CHHHHHHHHHHHHhhc---CCeEEEEECCCCchHHHHHHHHHHhCCCEEEE
Confidence 664 45799976543 333432 2544456677777766 58888877 8899999999999999998843
No 83
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=95.53 E-value=0.15 Score=43.41 Aligned_cols=75 Identities=17% Similarity=0.113 Sum_probs=59.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEE-e--cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 64 LTDVNQAEEFIDETDIDALAV-C--IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAv-a--iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
.-||..|++ +++-|+|++-+ . ||+- ..-.|+++|+.|.+.. ++|++.=||-+.|.+ ..++.++|.
T Consensus 143 ~dd~~~akr-l~~~G~~aVmPlg~pIGsG-------~Gi~~~~lI~~I~e~~---~vPVI~eGGI~TPsD-Aa~AmeLGA 210 (265)
T 1wv2_A 143 SDDPIIARQ-LAEIGCIAVMPLAGLIGSG-------LGICNPYNLRIILEEA---KVPVLVDAGVGTASD-AAIAMELGC 210 (265)
T ss_dssp CSCHHHHHH-HHHSCCSEEEECSSSTTCC-------CCCSCHHHHHHHHHHC---SSCBEEESCCCSHHH-HHHHHHHTC
T ss_pred CCCHHHHHH-HHHhCCCEEEeCCccCCCC-------CCcCCHHHHHHHHhcC---CCCEEEeCCCCCHHH-HHHHHHcCC
Confidence 357888888 55789999955 1 4551 2335899999999976 699999999887755 999999999
Q ss_pred eEeecchHHH
Q 029526 141 RKFNVNTEVR 150 (192)
Q Consensus 141 ~KINi~T~l~ 150 (192)
.-|=++|.+.
T Consensus 211 dgVlVgSAI~ 220 (265)
T 1wv2_A 211 EAVLMNTAIA 220 (265)
T ss_dssp SEEEESHHHH
T ss_pred CEEEEChHHh
Confidence 9999999884
No 84
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=95.52 E-value=0.043 Score=45.07 Aligned_cols=136 Identities=10% Similarity=0.087 Sum_probs=78.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH--hCC--CeEEEe--cc--ccccCCCCCccccccccCCCHHHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH--SKG--MLVEAE--LG--RLSGTEDGLTVEDYEAKLTDVNQAEEF 73 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah--~~g--v~VEaE--lG--~i~g~e~~~~~~~~~~~~T~peea~~F 73 (192)
+++++|.+.|++....+.-+.|....+++++.+. .-. +++..= =| .|-- .+. . +..-+++.+..+-
T Consensus 91 ~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~-~g~----~-~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 91 EAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFT-HSG----K-KNTGILLRDWVVE 164 (266)
T ss_dssp HHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEE-TTT----T-EEEEEEHHHHHHH
T ss_pred HHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEE-CCC----c-eecchhHHHHHHH
Confidence 4678899999997766622224444455444332 101 222220 01 1100 000 0 0011356665555
Q ss_pred hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 74 IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 74 v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+++.|++.+-+.--+.-|.+.+ .|+++++++++.+ ++|++.=||-+.+ ++++++.+.|+.=+=++|.+..
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g----~~~~~i~~l~~~~---~ipvia~GGI~~~-ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSG----YDTEMIRFVRPLT---TLPIIASGGAGKM-EHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSC----CCHHHHHHHGGGC---CSCEEEESCCCSH-HHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHcCCCEEEEEeecCCCCcCC----CCHHHHHHHHHHc---CCCEEEeCCCCCH-HHHHHHHHcCCHHHHccHHHHc
Confidence 6788999988754344455432 3899999999887 6999987765554 5788898999999999998753
No 85
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.45 E-value=0.16 Score=46.21 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=79.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK--GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
+++++|++-|-+|.++-..+. +.++++..++. ++.|=+ |. .+++++|+... +.|+
T Consensus 262 ~~~~aG~d~v~i~~~~G~~~~----~~~~i~~i~~~~~~~pvi~--~~----------------v~t~~~a~~l~-~aGa 318 (514)
T 1jcn_A 262 LLTQAGVDVIVLDSSQGNSVY----QIAMVHYIKQKYPHLQVIG--GN----------------VVTAAQAKNLI-DAGV 318 (514)
T ss_dssp HHHHTTCSEEEECCSCCCSHH----HHHHHHHHHHHCTTCEEEE--EE----------------ECSHHHHHHHH-HHTC
T ss_pred HHHHcCCCEEEeeccCCcchh----HHHHHHHHHHhCCCCceEe--cc----------------cchHHHHHHHH-HcCC
Confidence 578899999999999754332 33444444443 666643 11 25678888754 7899
Q ss_pred cEEEEecCc-CCCCC--C--CCCC-CCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 80 DALAVCIGN-VHGKY--P--SSGP-NLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 80 D~LAvaiGt-~HG~y--~--~~~p-~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
|++-|++|. .|-.. . .+.| ...+..+.++.+.+ ++|++.=||-..+ +++.+++.+|..=+-++|.+.
T Consensus 319 d~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~---~ipVia~GGI~~~-~di~kala~GAd~V~iG~~~l 391 (514)
T 1jcn_A 319 DGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF---GVPIIADGGIQTV-GHVVKALALGASTVMMGSLLA 391 (514)
T ss_dssp SEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG---TCCEEEESCCCSH-HHHHHHHHTTCSEEEESTTTT
T ss_pred CEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC---CCCEEEECCCCCH-HHHHHHHHcCCCeeeECHHHH
Confidence 999985521 11000 0 0011 23456666776665 6999999976654 569999999999999999773
No 86
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.40 E-value=0.11 Score=45.65 Aligned_cols=126 Identities=17% Similarity=0.227 Sum_probs=80.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.++++|.+-|-+|.++-..+..+...+++ ...+++.|=+ | .-+++++|+... +.|+|+
T Consensus 112 ~l~eaGad~I~ld~a~G~~~~~~~~i~~i---~~~~~~~Viv--g----------------~v~t~e~A~~l~-~aGaD~ 169 (361)
T 3khj_A 112 LLVEAGVDVIVLDSAHGHSLNIIRTLKEI---KSKMNIDVIV--G----------------NVVTEEATKELI-ENGADG 169 (361)
T ss_dssp HHHHTTCSEEEECCSCCSBHHHHHHHHHH---HHHCCCEEEE--E----------------EECSHHHHHHHH-HTTCSE
T ss_pred HHHHcCcCeEEEeCCCCCcHHHHHHHHHH---HHhcCCcEEE--c----------------cCCCHHHHHHHH-HcCcCE
Confidence 47889999999998875433333332222 2234655543 1 126788887754 789999
Q ss_pred EEEecCc--CCCCC-CCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGN--VHGKY-PSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt--~HG~y-~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+-|++|- .|+.- ..+...-+++.|.++.+..+..++|++-=||-.. .+++.+++.+|..=|-++|.+.
T Consensus 170 I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~-~~di~kala~GAd~V~vGs~~~ 240 (361)
T 3khj_A 170 IKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRY-SGDIGKALAVGASSVMIGSILA 240 (361)
T ss_dssp EEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCS-HHHHHHHHHHTCSEEEESTTTT
T ss_pred EEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCC-HHHHHHHHHcCCCEEEEChhhh
Confidence 9985432 11110 0001112567788886654434799999886544 4679999999999999998874
No 87
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.37 E-value=0.087 Score=48.03 Aligned_cols=126 Identities=18% Similarity=0.243 Sum_probs=83.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
+++++|.+-|-+|.++-..+..+...+++.+ .+ ++.|=+ | ..+++++|+... +.|+|
T Consensus 236 ~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~---~~p~~~Vi~--g----------------~v~t~e~a~~l~-~aGaD 293 (490)
T 4avf_A 236 ALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ---TFPDVQVIG--G----------------NIATAEAAKALA-EAGAD 293 (490)
T ss_dssp HHHHTTCSEEEEECSCCSBHHHHHHHHHHHH---HCTTSEEEE--E----------------EECSHHHHHHHH-HTTCS
T ss_pred HHhhcccceEEecccCCcchhHHHHHHHHHH---HCCCceEEE--e----------------eeCcHHHHHHHH-HcCCC
Confidence 4678899999999887644433333333332 22 444433 1 136778887754 68999
Q ss_pred EEEEecCc--CCCC-CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 81 ALAVCIGN--VHGK-YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 81 ~LAvaiGt--~HG~-y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
++-|++|. .|+. ...+...-+++.|.++.+.++..++|++-=||-..+ +++.+++.+|..=+-++|.+.
T Consensus 294 ~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~-~di~kal~~GAd~V~vGs~~~ 365 (490)
T 4avf_A 294 AVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFS-GDLAKAMVAGAYCVMMGSMFA 365 (490)
T ss_dssp EEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSH-HHHHHHHHHTCSEEEECTTTT
T ss_pred EEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCH-HHHHHHHHcCCCeeeecHHHh
Confidence 99986543 1110 000011236788888888775557999999976655 569999999999999999873
No 88
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.33 E-value=0.29 Score=45.01 Aligned_cols=113 Identities=12% Similarity=0.174 Sum_probs=79.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhcc----CCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSK----KGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~----~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
.++++|+. +.+.|+|++.|+ | ||...-....-.++.|.++.+.+.. .++|+..=||--.+.+ +.+++.+|.
T Consensus 352 ~~~e~A~~-a~~aGad~I~vs--~-hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~D-v~kaLalGA 426 (511)
T 1kbi_A 352 QRTEDVIK-AAEIGVSGVVLS--N-HGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTD-VLKALCLGA 426 (511)
T ss_dssp CSHHHHHH-HHHTTCSEEEEC--C-TTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHH-HHHHHHHTC
T ss_pred CCHHHHHH-HHHcCCCEEEEc--C-CCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHH-HHHHHHcCC
Confidence 46888877 568899999884 3 7653211122357888899888731 2599999998876655 788888999
Q ss_pred eEeecchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 141 RKFNVNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 141 ~KINi~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
.=|.+++.+..+....= ..-.....+.+++.++..|.+.|..
T Consensus 427 daV~iGr~~l~~~~~~G-------~~gv~~~l~~l~~el~~~m~~~G~~ 468 (511)
T 1kbi_A 427 KGVGLGRPFLYANSCYG-------RNGVEKAIEILRDEIEMSMRLLGVT 468 (511)
T ss_dssp SEEEECHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEECHHHHHHHHhcC-------hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999886653210 1123345677888888889988864
No 89
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.32 E-value=0.14 Score=45.36 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=74.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK--GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
+++++|++-|-+|.++-.. ++ ..++++..++. ++.|=+ | ...+|++|+.. .+.|+
T Consensus 107 ~a~~aGvdvI~id~a~G~~-~~---~~e~I~~ir~~~~~~~Vi~--G----------------~V~T~e~A~~a-~~aGa 163 (361)
T 3r2g_A 107 ALRDAGADFFCVDVAHAHA-KY---VGKTLKSLRQLLGSRCIMA--G----------------NVATYAGADYL-ASCGA 163 (361)
T ss_dssp HHHHTTCCEEEEECSCCSS-HH---HHHHHHHHHHHHTTCEEEE--E----------------EECSHHHHHHH-HHTTC
T ss_pred HHHHcCCCEEEEeCCCCCc-Hh---HHHHHHHHHHhcCCCeEEE--c----------------CcCCHHHHHHH-HHcCC
Confidence 5789999999999886422 22 23444455542 444432 1 12578888875 47899
Q ss_pred cEEEEecCcCCCCCC-------C-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 80 DALAVCIGNVHGKYP-------S-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 80 D~LAvaiGt~HG~y~-------~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
|++-|++ ||.+. + +.| .++.|.++.+.. . |+..=||-.. .+++.+++.+|..=|-++|.+.
T Consensus 164 D~I~Vg~---g~G~~~~tr~~~g~g~p--~l~aI~~~~~~~---~-PVIAdGGI~~-~~di~kALa~GAd~V~iGr~f~ 232 (361)
T 3r2g_A 164 DIIKAGI---GGGSVCSTRIKTGFGVP--MLTCIQDCSRAD---R-SIVADGGIKT-SGDIVKALAFGADFVMIGGMLA 232 (361)
T ss_dssp SEEEECC---SSSSCHHHHHHHCCCCC--HHHHHHHHTTSS---S-EEEEESCCCS-HHHHHHHHHTTCSEEEESGGGT
T ss_pred CEEEEcC---CCCcCccccccCCccHH--HHHHHHHHHHhC---C-CEEEECCCCC-HHHHHHHHHcCCCEEEEChHHh
Confidence 9999854 44321 0 123 344444443332 2 9998886543 5669999999999999999874
No 90
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.24 E-value=0.086 Score=42.82 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=58.1
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
+++.+..+-+++.|++.+-+.--+.-|.+.+ .|+++++++++.+ ++|++-=||-+.+ ++++++.+.|+.=+=
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g----~~~~~i~~l~~~~---~ipvia~GGI~~~-~d~~~~~~~Gadgv~ 223 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTKEG----YDLRLTRMVAEAV---GVPVIASGGAGRM-EHFLEAFQAGAEAAL 223 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTCSC----CCHHHHHHHHHHC---SSCEEEESCCCSH-HHHHHHHHTTCSEEE
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCcCC----CCHHHHHHHHHHc---CCCEEEeCCCCCH-HHHHHHHHCCCHHHH
Confidence 3444544446678999887753334455432 3899999999987 6999998866655 679999999999999
Q ss_pred cchHHH
Q 029526 145 VNTEVR 150 (192)
Q Consensus 145 i~T~l~ 150 (192)
+++.+.
T Consensus 224 vgsal~ 229 (252)
T 1ka9_F 224 AASVFH 229 (252)
T ss_dssp ESHHHH
T ss_pred HHHHHH
Confidence 999885
No 91
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=95.24 E-value=0.67 Score=38.57 Aligned_cols=123 Identities=13% Similarity=0.121 Sum_probs=79.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|.++|.+.|.+ ..+|+++ ..++++.++++|+.+ ..+.. .-|+++..++..+.. -++
T Consensus 117 ~~~~aGadgii~--~d~~~e~----~~~~~~~~~~~g~~~----i~l~~------------p~t~~~~i~~i~~~~-~g~ 173 (268)
T 1qop_A 117 RCEQVGVDSVLV--ADVPVEE----SAPFRQAALRHNIAP----IFICP------------PNADDDLLRQVASYG-RGY 173 (268)
T ss_dssp HHHHHTCCEEEE--TTCCGGG----CHHHHHHHHHTTCEE----ECEEC------------TTCCHHHHHHHHHHC-CSC
T ss_pred HHHHcCCCEEEE--cCCCHHH----HHHHHHHHHHcCCcE----EEEEC------------CCCCHHHHHHHHhhC-CCc
Confidence 467888886665 4556533 457788889888754 22210 115566666655543 233
Q ss_pred EEEecCcCCCCCCCC--CCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHHHHH
Q 029526 82 LAVCIGNVHGKYPSS--GPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRKAYM 154 (192)
Q Consensus 82 LAvaiGt~HG~y~~~--~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~a~~ 154 (192)
+- .+ +.-|..... .+.-.++.++++++.+ ++|+.. |.|+. .+++++++..|..=+=++|.+.....
T Consensus 174 v~-~~-s~~G~tG~~~~~~~~~~~~i~~lr~~~---~~pi~v--ggGI~t~e~~~~~~~agAD~vVVGSai~~~~~ 242 (268)
T 1qop_A 174 TY-LL-SRSGVTGAENRGALPLHHLIEKLKEYH---AAPALQ--GFGISSPEQVSAAVRAGAAGAISGSAIVKIIE 242 (268)
T ss_dssp EE-EE-SSSSCCCSSSCC--CCHHHHHHHHHTT---CCCEEE--ESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred EE-EE-ecCCcCCCccCCCchHHHHHHHHHhcc---CCcEEE--ECCCCCHHHHHHHHHcCCCEEEEChHHhhhHh
Confidence 21 11 333432211 1233478899999887 699888 66887 89999999999999999999977653
No 92
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.20 E-value=0.39 Score=45.40 Aligned_cols=135 Identities=13% Similarity=0.109 Sum_probs=88.3
Q ss_pred hhhhcCCCEeEeeCCC--------------------CCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccc
Q 029526 2 EAIVLGFDSLMVDGSH--------------------LPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVE 58 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------------------l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~ 58 (192)
+|.++||+-|-+-+++ -++|...+...||++-.++. +..|-.=|.--...++
T Consensus 157 ~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~----- 231 (729)
T 1o94_A 157 RSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGP----- 231 (729)
T ss_dssp HHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCT-----
T ss_pred HHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCC-----
Confidence 6889999999998877 15788899999999988753 4444444432111000
Q ss_pred cccccCC---CHHHHHHHhhhhCCcEEEEecCc---CCCCCCC---CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCH
Q 029526 59 DYEAKLT---DVNQAEEFIDETDIDALAVCIGN---VHGKYPS---SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSA 129 (192)
Q Consensus 59 ~~~~~~T---~peea~~Fv~~TgvD~LAvaiGt---~HG~y~~---~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~ 129 (192)
.-+| +..+..+.+++ ++|+|-++.|+ .|+...+ ..+..+++..++|++.+ ++|++.=|+-- +.
T Consensus 232 ---~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pvi~~G~i~-~~ 303 (729)
T 1o94_A 232 ---GQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS---KKPVLGVGRYT-DP 303 (729)
T ss_dssp ---TSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC---SSCEECCSCCC-CH
T ss_pred ---CCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC---CCEEEEeCCCC-CH
Confidence 0122 23333344555 79999999997 3322111 01334678888999887 69988777543 46
Q ss_pred HHHHHHHhcC-CeEeecchHH
Q 029526 130 ELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 130 e~~~~~i~~G-i~KINi~T~l 149 (192)
++..++++.| +.=|-+++.+
T Consensus 304 ~~a~~~l~~g~aD~V~~gR~~ 324 (729)
T 1o94_A 304 EKMIEIVTKGYADIIGCARPS 324 (729)
T ss_dssp HHHHHHHHTTSCSBEEESHHH
T ss_pred HHHHHHHHCCCCCEEEeCchh
Confidence 7788899888 7777777765
No 93
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=95.20 E-value=0.26 Score=47.21 Aligned_cols=151 Identities=16% Similarity=0.128 Sum_probs=99.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+|+++|.+.|-+=.|.- |++..++.+++|++.|..|++-+-+.+..+|.. ...++|+...++++ +.|
T Consensus 205 ~a~~~Gvd~irIf~s~n----~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~------r~~~~~e~~~~~a~~l~~~G 274 (718)
T 3bg3_A 205 VAKENGMDVFRVFDSLN----YLPNMLLGMEAAGSAGGVVEAAISYTGDVADPS------RTKYSLQYYMGLAEELVRAG 274 (718)
T ss_dssp HHHHHTCCEEEEECSSC----CHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTT------CCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhcCcCEEEEEecHH----HHHHHHHHHHHHHHcCCeEEEEEEeeccccCCC------CCCCCHHHHHHHHHHHHHcC
Confidence 57788888765544543 355667778889999999987776654333321 12357888777755 579
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEee------------
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFN------------ 144 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KIN------------ 144 (192)
+|+|.+. -.=|.- .|.-=.++++.|++.+. ++||-+|+ .+|+.-...-.|++.|+.-|.
T Consensus 275 a~~I~l~--DT~G~~---~P~~v~~lV~~lk~~~p--~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN 347 (718)
T 3bg3_A 275 THILCIK--DMAGLL---KPTACTMLVSSLRDRFP--DLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQ 347 (718)
T ss_dssp CSEEEEE--CTTSCC---CHHHHHHHHHHHHHHST--TCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSC
T ss_pred CCEEEEc--CcCCCc---CHHHHHHHHHHHHHhCC--CCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCc
Confidence 9988775 222222 25444667788887763 48888887 899999999999999999884
Q ss_pred cchHHHHHHHHHhc-CCCCChHHHHH
Q 029526 145 VNTEVRKAYMDSLS-RPKSDLIHLMA 169 (192)
Q Consensus 145 i~T~l~~a~~~~~~-~~~~~~~~~~~ 169 (192)
..|+-..++++... ++..|+..+.+
T Consensus 348 ~~lE~vv~~L~~~g~~tgidl~~L~~ 373 (718)
T 3bg3_A 348 PSMGALVACTRGTPLDTEVPMERVFD 373 (718)
T ss_dssp CBHHHHHHHHTTSTTCCCCCHHHHHH
T ss_pred hhHHHHHHHHHhcCCCcccCHHHHHH
Confidence 45555555554432 23345555543
No 94
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.09 E-value=0.064 Score=44.89 Aligned_cols=115 Identities=21% Similarity=0.156 Sum_probs=84.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|..+|-+-|-+..+.++ ...+++++.||.+|+++=.|+ .+++|+.+ +.+.|.|.
T Consensus 123 ~a~~~GAD~VlL~~~~l~-----~~l~~l~~~a~~lGl~~lvev-------------------~~~~E~~~-a~~~gad~ 177 (254)
T 1vc4_A 123 EARAFGASAALLIVALLG-----ELTGAYLEEARRLGLEALVEV-------------------HTERELEI-ALEAGAEV 177 (254)
T ss_dssp HHHHTTCSEEEEEHHHHG-----GGHHHHHHHHHHHTCEEEEEE-------------------CSHHHHHH-HHHHTCSE
T ss_pred HHHHcCCCEEEECccchH-----HHHHHHHHHHHHCCCeEEEEE-------------------CCHHHHHH-HHHcCCCE
Confidence 478899999999999887 357899999999997765442 23456553 44667898
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccC--CccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKK--GVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~--~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+.+.-=+ |+ ....|++.++++.+.+... ++|+|- .||+. .++++++.+ |+.=+=|++.+.
T Consensus 178 IGvn~~~----l~--~~~~dl~~~~~L~~~i~~~~~~~~vIA--egGI~s~~dv~~l~~-Ga~gvlVGsAl~ 240 (254)
T 1vc4_A 178 LGINNRD----LA--TLHINLETAPRLGRLARKRGFGGVLVA--ESGYSRKEELKALEG-LFDAVLIGTSLM 240 (254)
T ss_dssp EEEESBC----TT--TCCBCTTHHHHHHHHHHHTTCCSEEEE--ESCCCSHHHHHTTTT-TCSEEEECHHHH
T ss_pred EEEcccc----Cc--CCCCCHHHHHHHHHhCccccCCCeEEE--EcCCCCHHHHHHHHc-CCCEEEEeHHHc
Confidence 8654322 33 2566888888888776311 367775 67887 899999999 999999999885
No 95
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.94 E-value=0.13 Score=44.45 Aligned_cols=79 Identities=14% Similarity=0.227 Sum_probs=59.8
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCC-CCCCCC--HHHHHHHHhhhccCCccEEeec-CCCCCHHHHHHHHhcCC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPS-SGPNLK--LDLLKDLHALSSKKGVLLVLHG-ASGLSAELIKGCIERGV 140 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~-~~p~ld--~~~L~~I~~~~~~~~iPLVlHG-gSG~~~e~~~~~i~~Gi 140 (192)
.+|++..+.++..|+|++.+-++..+-.+.+ +.+.++ ++.+++|++.+ ++|+++=| +.+++.++.+++.+.|+
T Consensus 127 ~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~---~~Pv~vK~~~~~~~~~~a~~a~~~Ga 203 (349)
T 1p0k_A 127 ATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV---SVPVIVKEVGFGMSKASAGKLYEAGA 203 (349)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC---SSCEEEEEESSCCCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc---CCCEEEEecCCCCCHHHHHHHHHcCC
Confidence 4677888888899999999998876644332 135553 57788888777 69999988 78889999999999999
Q ss_pred eEeecc
Q 029526 141 RKFNVN 146 (192)
Q Consensus 141 ~KINi~ 146 (192)
.=|-+.
T Consensus 204 d~I~v~ 209 (349)
T 1p0k_A 204 AAVDIG 209 (349)
T ss_dssp SEEEEE
T ss_pred CEEEEc
Confidence 888874
No 96
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.87 E-value=0.29 Score=38.49 Aligned_cols=119 Identities=16% Similarity=0.048 Sum_probs=73.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.|+++|.+.|-+....- ++.+ +++.+.++++|..+ |.-- ...++|++..+-+++.|+|+
T Consensus 72 ~a~~~Gad~v~vh~~~~--~~~~---~~~~~~~~~~g~~~----gv~~------------~s~~~p~~~~~~~~~~g~d~ 130 (207)
T 3ajx_A 72 IAFKAGADLVTVLGSAD--DSTI---AGAVKAAQAHNKGV----VVDL------------IGIEDKATRAQEVRALGAKF 130 (207)
T ss_dssp HHHHTTCSEEEEETTSC--HHHH---HHHHHHHHHHTCEE----EEEC------------TTCSSHHHHHHHHHHTTCSE
T ss_pred HHHhCCCCEEEEeccCC--hHHH---HHHHHHHHHcCCce----EEEE------------ecCCChHHHHHHHHHhCCCE
Confidence 47788888887755433 2333 35667777767653 2200 02357777444455668999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+.+.-|...+ +.+ .+.+. ++|+++... ++|++.=||-. .+.++++++.|..=|-+++.+.
T Consensus 131 v~~~~~~~~~-~~g-~~~~~-~~i~~~~~~----~~pi~v~GGI~--~~~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 131 VEMHAGLDEQ-AKP-GFDLN-GLLAAGEKA----RVPFSVAGGVK--VATIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp EEEECCHHHH-TST-TCCTH-HHHHHHHHH----TSCEEEESSCC--GGGHHHHHHTTCSEEEESHHHH
T ss_pred EEEEeccccc-ccC-CCchH-HHHHHhhCC----CCCEEEECCcC--HHHHHHHHHcCCCEEEEeeecc
Confidence 8544333221 222 12222 555555433 48999999655 6789999999999999999985
No 97
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.84 E-value=0.31 Score=38.60 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=71.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.|+++|.+-|.+... + .++++.++.+|..+= +| -.+|+++.+- .+.|+|.
T Consensus 75 ~a~~~Gad~V~~~~~--~--------~~~~~~~~~~g~~~~-----~g--------------~~t~~e~~~a-~~~G~d~ 124 (212)
T 2v82_A 75 ALARMGCQLIVTPNI--H--------SEVIRRAVGYGMTVC-----PG--------------CATATEAFTA-LEAGAQA 124 (212)
T ss_dssp HHHHTTCCEEECSSC--C--------HHHHHHHHHTTCEEE-----CE--------------ECSHHHHHHH-HHTTCSE
T ss_pred HHHHcCCCEEEeCCC--C--------HHHHHHHHHcCCCEE-----ee--------------cCCHHHHHHH-HHCCCCE
Confidence 356677776654331 1 245666777765431 11 1467888765 4689999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+.+ |+. +.+.++.++++++.++. ++|++-=||- ..++++++.+.|+.=|=++|.+.
T Consensus 125 v~v--------~~t--~~~g~~~~~~l~~~~~~-~ipvia~GGI--~~~~i~~~~~~Ga~gv~vGsai~ 180 (212)
T 2v82_A 125 LKI--------FPS--SAFGPQYIKALKAVLPS-DIAVFAVGGV--TPENLAQWIDAGCAGAGLGSDLY 180 (212)
T ss_dssp EEE--------TTH--HHHCHHHHHHHHTTSCT-TCEEEEESSC--CTTTHHHHHHHTCSEEEECTTTC
T ss_pred EEE--------ecC--CCCCHHHHHHHHHhccC-CCeEEEeCCC--CHHHHHHHHHcCCCEEEEChHHh
Confidence 885 321 23567888888876621 3899887755 57889999999999999999885
No 98
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.83 E-value=0.59 Score=38.87 Aligned_cols=121 Identities=13% Similarity=0.125 Sum_probs=77.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|.++|++.+.+ ..+|++| ..++++.|+++|+.+ =.+.. .-|+++..++..+.. .++
T Consensus 117 ~~~~aG~dgvii--~dl~~ee----~~~~~~~~~~~gl~~----i~l~~------------p~t~~~rl~~ia~~a-~gf 173 (262)
T 2ekc_A 117 LSREKGIDGFIV--PDLPPEE----AEELKAVMKKYVLSF----VPLGA------------PTSTRKRIKLICEAA-DEM 173 (262)
T ss_dssp HHHHTTCCEEEC--TTCCHHH----HHHHHHHHHHTTCEE----CCEEC------------TTCCHHHHHHHHHHC-SSC
T ss_pred HHHHcCCCEEEE--CCCCHHH----HHHHHHHHHHcCCcE----EEEeC------------CCCCHHHHHHHHHhC-CCC
Confidence 477899998777 5678744 567888999999765 11110 115566666666554 233
Q ss_pred EEEecCcCCCCCCCCCC---CCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEeecchHHHHHH
Q 029526 82 LAVCIGNVHGKYPSSGP---NLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFNVNTEVRKAY 153 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p---~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KINi~T~l~~a~ 153 (192)
+ ..+ +.-|..-...+ .-..++++++++.+ ++|+.. |.|+. .+++++ +..|..=+=++|.+....
T Consensus 174 i-y~v-s~~g~TG~~~~~~~~~~~~~v~~vr~~~---~~pv~v--G~GI~t~e~~~~-~~~gADgvIVGSai~~~~ 241 (262)
T 2ekc_A 174 T-YFV-SVTGTTGAREKLPYERIKKKVEEYRELC---DKPVVV--GFGVSKKEHARE-IGSFADGVVVGSALVKLA 241 (262)
T ss_dssp E-EEE-SSCC---------CHHHHHHHHHHHHHC---CSCEEE--ESSCCSHHHHHH-HHTTSSEEEECHHHHHHH
T ss_pred E-EEE-ecCCccCCCCCcCcccHHHHHHHHHhhc---CCCEEE--eCCCCCHHHHHH-HHcCCCEEEECHHHHhhh
Confidence 2 111 22332211111 11247788888877 699888 78997 899999 788999999999998775
No 99
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=94.81 E-value=0.072 Score=43.31 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|.+..+.+++.|+|+|-++=.+..|. ....+++.+++|++.+ ++|+.+.|+-.. .+++.++.+.|+..|-
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~----~~~~~~~~i~~i~~~~---~iPvi~~Ggi~~-~~~~~~~~~~Gad~V~ 102 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHE----ERAILLDVVARVAERV---FIPLTVGGGVRS-LEDARKLLLSGADKVS 102 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTT----CHHHHHHHHHHHHTTC---CSCEEEESSCCS-HHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcccc----CccccHHHHHHHHHhC---CCCEEEECCcCC-HHHHHHHHHcCCCEEE
Confidence 4787877777899999998873333221 1234678888888776 699999997754 5789999999999999
Q ss_pred cchHHHH
Q 029526 145 VNTEVRK 151 (192)
Q Consensus 145 i~T~l~~ 151 (192)
+++.+..
T Consensus 103 lg~~~l~ 109 (252)
T 1ka9_F 103 VNSAAVR 109 (252)
T ss_dssp ECHHHHH
T ss_pred EChHHHh
Confidence 9997753
No 100
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=94.77 E-value=0.14 Score=41.99 Aligned_cols=78 Identities=9% Similarity=0.118 Sum_probs=58.8
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|.+..+.+++.|+|+|-++=-+.-|.+ ...+++.+++|++.+ ++|+.+-||-.. .+++.++.+.|+..+-
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~----~g~~~~~i~~i~~~~---~iPvi~~ggi~~-~~~i~~~~~~Gad~v~ 101 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTK----SGYDTEMIRFVRPLT---TLPIIASGGAGK-MEHFLEAFLAGADKAL 101 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCS----SCCCHHHHHHHGGGC---CSCEEEESCCCS-THHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCC----CcccHHHHHHHHHhc---CCCEEEECCCCC-HHHHHHHHHcCCcHhh
Confidence 46777777778899999998533332322 224789999998876 699999888654 4669999999999999
Q ss_pred cchHHH
Q 029526 145 VNTEVR 150 (192)
Q Consensus 145 i~T~l~ 150 (192)
++|.+.
T Consensus 102 lg~~~~ 107 (266)
T 2w6r_A 102 AASVFH 107 (266)
T ss_dssp CCCCC-
T ss_pred hhHHHH
Confidence 998765
No 101
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.75 E-value=0.25 Score=44.28 Aligned_cols=138 Identities=12% Similarity=0.147 Sum_probs=87.9
Q ss_pred ChhhhcCCCEeEeeCCC--------C------------CH-HHHHHHHHHHHHHHHhC-------CCeEEEeccccccCC
Q 029526 1 MEAIVLGFDSLMVDGSH--------L------------PF-KDNISHTKYISFLAHSK-------GMLVEAELGRLSGTE 52 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~--------l------------~~-eeNi~~Tk~vv~~Ah~~-------gv~VEaElG~i~g~e 52 (192)
++|+++||+-|-|-+.+ - ++ |.-.+...||++-.++. +..|-. ++...+
T Consensus 177 ~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~v---Ris~~~ 253 (419)
T 3l5a_A 177 LRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGF---RATPEE 253 (419)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEE---EECSCE
T ss_pred HHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEE---eccccc
Confidence 37899999999999886 1 23 77778888888877752 233333 222111
Q ss_pred CCCccccccccCCCHHHHHHH---hhh-hCCcEEEEecCcC----CCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC
Q 029526 53 DGLTVEDYEAKLTDVNQAEEF---IDE-TDIDALAVCIGNV----HGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 53 ~~~~~~~~~~~~T~peea~~F---v~~-TgvD~LAvaiGt~----HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
... .. .-+ ++++..+| +++ .|+|+|-|+-|+. ...... .+..+.+.++.|++.++. ++|++.=|+
T Consensus 254 -~~~-~~--~G~-~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~-g~~~~~~~a~~Ik~~v~~-~iPVI~~Gg 326 (419)
T 3l5a_A 254 -TRG-SD--LGY-TIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTP-GDHFGRPVNQIVYEHLAG-RIPLIASGG 326 (419)
T ss_dssp -EET-TE--EEE-CHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCS-STTTTSBHHHHHHHHHTT-SSCEEECSS
T ss_pred -ccC-CC--CCC-CHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCC-CccccHHHHHHHHHHcCC-CCeEEEECC
Confidence 000 00 011 24454444 455 8999999999875 211111 233566778999988731 389888775
Q ss_pred CCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 125 SGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 125 SG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
-- +.++..++++. +.=|=+++.+.
T Consensus 327 I~-t~e~Ae~~L~~-aDlVaiGR~~I 350 (419)
T 3l5a_A 327 IN-SPESALDALQH-ADMVGMSSPFV 350 (419)
T ss_dssp CC-SHHHHHHHGGG-CSEEEESTHHH
T ss_pred CC-CHHHHHHHHHh-CCcHHHHHHHH
Confidence 43 56778899998 88899998873
No 102
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=94.69 E-value=0.14 Score=41.63 Aligned_cols=77 Identities=8% Similarity=0.103 Sum_probs=57.1
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
++.+..+-+++.|+|.+-+.--+.-|.+. ..|++.+++|++.+ ++|++-=||-+.+ ++++++.+.|+.=+=+
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~~----g~~~~~~~~l~~~~---~ipvia~GGI~~~-~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTKS----GYDTEMIRFVRPLT---TLPIIASGGAGKM-EHFLEAFLAGADAALA 223 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSCS----CCCHHHHHHHGGGC---CSCEEEESCCCSH-HHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCCC----CCCHHHHHHHHHhc---CCCEEEECCCCCH-HHHHHHHHcCChHHHH
Confidence 45555555667899988774323334432 24899999999876 6999988866554 7799999999999999
Q ss_pred chHHH
Q 029526 146 NTEVR 150 (192)
Q Consensus 146 ~T~l~ 150 (192)
+|.+.
T Consensus 224 Gsal~ 228 (253)
T 1thf_D 224 ASVFH 228 (253)
T ss_dssp SHHHH
T ss_pred HHHHH
Confidence 99875
No 103
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.67 E-value=0.13 Score=41.57 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=57.8
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc---CCeE
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER---GVRK 142 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~---Gi~K 142 (192)
++.+..+.+++.|+|.+-+.-.+..|.|. .+|++.+++|++.+ ++|++-=||-..+ ++++++.+. |+.-
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~----g~~~~~~~~l~~~~---~ipvia~GGI~~~-~d~~~~~~~~~~Gad~ 221 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLG----GPNLDLLAGVADRT---DAPVIASGGVSSL-DDLRAIATLTHRGVEG 221 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTS----CCCHHHHHHHHTTC---SSCEEEESCCCSH-HHHHHHHTTGGGTEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccC----CCCHHHHHHHHHhC---CCCEEEECCCCCH-HHHHHHHhhccCCCCE
Confidence 44454444667899998876555555553 24899999999876 6999988855544 669999988 9999
Q ss_pred eecchHHH
Q 029526 143 FNVNTEVR 150 (192)
Q Consensus 143 INi~T~l~ 150 (192)
+=++|.+.
T Consensus 222 v~vG~al~ 229 (244)
T 2y88_A 222 AIVGKALY 229 (244)
T ss_dssp EEECHHHH
T ss_pred EEEcHHHH
Confidence 99999875
No 104
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.65 E-value=0.44 Score=44.11 Aligned_cols=143 Identities=13% Similarity=0.106 Sum_probs=97.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEE--------ecc----ccccCCCCCccc---------cc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEA--------ELG----RLSGTEDGLTVE---------DY 60 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEa--------ElG----~i~g~e~~~~~~---------~~ 60 (192)
+|++.|-+.|-+.--.++.++.++..+++.++|+++|+.+=- ++| |+| .+|..... -.
T Consensus 33 ~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~~dlA~~~gAdGVHLg-q~dl~~~~ar~~lg~~~ii 111 (540)
T 3nl6_A 33 AGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVG-QDDMPIPMIRKLVGPDMVI 111 (540)
T ss_dssp HHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSCSHHHHHTTCSEEEEC-TTSSCHHHHHHHHCTTSEE
T ss_pred HHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCcHHHHHHcCCCEEEEC-hhhcCHHHHHHHhCCCCEE
Confidence 588999999999999999999999999999999998865432 222 332 22211000 00
Q ss_pred cccCCCHHHHHHHhhhhC---CcEEEEecCcCCCCCC-CCC--CCCCHHHHHHHHhhhcc---CCccEEeecCCCCCHHH
Q 029526 61 EAKLTDVNQAEEFIDETD---IDALAVCIGNVHGKYP-SSG--PNLKLDLLKDLHALSSK---KGVLLVLHGASGLSAEL 131 (192)
Q Consensus 61 ~~~~T~peea~~Fv~~Tg---vD~LAvaiGt~HG~y~-~~~--p~ld~~~L~~I~~~~~~---~~iPLVlHGgSG~~~e~ 131 (192)
...-.+++|+.+ ..+.| +|++.+ |.+.--.. ++. |.+.++.|++|.+.++. .++|+|-=|| +..++
T Consensus 112 G~S~ht~eea~~-A~~~G~~~aDYv~~--Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGG--I~~~n 186 (540)
T 3nl6_A 112 GWSVGFPEEVDE-LSKMGPDMVDYIGV--GTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGG--LHPDN 186 (540)
T ss_dssp EEEECSHHHHHH-HHHTCC--CCEEEE--SCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESS--CCTTT
T ss_pred EEECCCHHHHHH-HHHcCCCCCCEEEE--cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcC--CCHHH
Confidence 111247899887 55678 999876 56532211 111 34668999999887421 2699999995 46788
Q ss_pred HHHHHh--------cCCeEeecchHHH
Q 029526 132 IKGCIE--------RGVRKFNVNTEVR 150 (192)
Q Consensus 132 ~~~~i~--------~Gi~KINi~T~l~ 150 (192)
+.++++ .|+.=|=+.+.+.
T Consensus 187 i~~v~~~~~~~g~~~GadgvAVvsaI~ 213 (540)
T 3nl6_A 187 IERVLYQCVSSNGKRSLDGICVVSDII 213 (540)
T ss_dssp HHHHHHHCBCTTSSCBCSCEEESHHHH
T ss_pred HHHHHHhhcccccccCceEEEEeHHHh
Confidence 999887 7788888888775
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.60 E-value=0.37 Score=44.13 Aligned_cols=125 Identities=15% Similarity=0.209 Sum_probs=80.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
..+++|.+-|.+|.++-..+..+...+++.+ .+ ++.|=+ | ...++++|+..+ +.|+|
T Consensus 263 aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~---~~~~~~vi~--g----------------~v~t~e~a~~~~-~aGad 320 (511)
T 3usb_A 263 ALVKASVDAIVLDTAHGHSQGVIDKVKEVRA---KYPSLNIIA--G----------------NVATAEATKALI-EAGAN 320 (511)
T ss_dssp HHHHTTCSEEEEECSCTTSHHHHHHHHHHHH---HCTTSEEEE--E----------------EECSHHHHHHHH-HHTCS
T ss_pred HHHhhccceEEecccccchhhhhhHHHHHHH---hCCCceEEe--e----------------eeccHHHHHHHH-HhCCC
Confidence 3578899999999887544444433333332 22 233221 1 135778887755 77999
Q ss_pred EEEEecCc--CCCCC-CCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHH
Q 029526 81 ALAVCIGN--VHGKY-PSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 81 ~LAvaiGt--~HG~y-~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l 149 (192)
++-|.+|- .|+.- ..+...-+++.|.++.+..+..++|+..=||-..+. ++.+|+.+|..=+-++|.+
T Consensus 321 ~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~-di~kala~GA~~V~vGs~~ 391 (511)
T 3usb_A 321 VVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSG-DMVKALAAGAHVVMLGSMF 391 (511)
T ss_dssp EEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHH-HHHHHHHTTCSEEEESTTT
T ss_pred EEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHH-HHHHHHHhCchhheecHHH
Confidence 99885432 11100 000112256778888777665579999999887665 5999999999999999976
No 106
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=94.58 E-value=0.6 Score=39.96 Aligned_cols=110 Identities=11% Similarity=0.049 Sum_probs=76.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEec--CcC-------CC---------CCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCC
Q 029526 65 TDVNQAEEFIDETDIDALAVCI--GNV-------HG---------KYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASG 126 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvai--Gt~-------HG---------~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG 126 (192)
.+|++|+. +.+.|+|.+.|+- ||. +. .+. +.| .++.|.++++.+. ++|+..=||--
T Consensus 193 ~~~e~a~~-~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~-g~~--~~~~l~~v~~~~~--~ipvia~GGI~ 266 (332)
T 1vcf_A 193 LSREAALA-LRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEI-GIP--TARAILEVREVLP--HLPLVASGGVY 266 (332)
T ss_dssp CCHHHHHH-HTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTC-SCB--HHHHHHHHHHHCS--SSCEEEESSCC
T ss_pred CCHHHHHH-HHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhc-ccc--HHHHHHHHHHhcC--CCeEEEECCCC
Confidence 56888875 6688999999963 321 21 111 112 4677888888773 59999999887
Q ss_pred CCHHHHHHHHhcCCeEeecchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 127 LSAELIKGCIERGVRKFNVNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 127 ~~~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
.+. ++.+++..|..=|.++|.+..+.. . . ..-.....+.+.+.++..|...|..
T Consensus 267 ~~~-d~~kal~~GAd~V~igr~~l~~~~----~-G---~~gv~~~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 267 TGT-DGAKALALGADLLAVARPLLRPAL----E-G---AERVAAWIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp SHH-HHHHHHHHTCSEEEECGGGHHHHT----T-C---HHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CHH-HHHHHHHhCCChHhhhHHHHHHHh----c-c---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 655 478888899999999999876541 1 1 1233445677777888888888864
No 107
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=94.52 E-value=0.54 Score=39.21 Aligned_cols=75 Identities=20% Similarity=0.168 Sum_probs=55.0
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCeEee
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVRKFN 144 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~KIN 144 (192)
+++++++ +.+.|.|++ ++.|..-|.-. .-.+++.|+.|++.+ ++|++.-| |+. .++++++++.|..=|=
T Consensus 136 ~~~~a~~-~~~~gad~v-~~~~~~~Gt~~---~~~~~~~l~~i~~~~---~iPviv~g--GI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 136 DVVLARK-LEELGVHAI-MPGASPIGSGQ---GILNPLNLSFIIEQA---KVPVIVDA--GIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp CHHHHHH-HHHHTCSCB-EECSSSTTCCC---CCSCHHHHHHHHHHC---SSCBEEES--CCCSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHH-HHHhCCCEE-EECCcccCCCC---CCCCHHHHHHHHhcC---CCCEEEEe--CCCCHHHHHHHHHcCCCEEE
Confidence 6777766 567889998 55443333211 112478899998866 69999887 664 6789999999999999
Q ss_pred cchHHH
Q 029526 145 VNTEVR 150 (192)
Q Consensus 145 i~T~l~ 150 (192)
++|.+.
T Consensus 206 VGSAi~ 211 (264)
T 1xm3_A 206 LNTAVS 211 (264)
T ss_dssp ESHHHH
T ss_pred EcHHHh
Confidence 999864
No 108
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=94.45 E-value=0.36 Score=42.14 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=83.7
Q ss_pred ChhhhcCCCEeEeeCCCC--------------------CHHHHHHHHHHHHHHHHhC-CCeEEEecc-ccccCCCCCccc
Q 029526 1 MEAIVLGFDSLMVDGSHL--------------------PFKDNISHTKYISFLAHSK-GMLVEAELG-RLSGTEDGLTVE 58 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l--------------------~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG-~i~g~e~~~~~~ 58 (192)
++|.++||+-|-|=+.|= ++|.=.+...||++-.++. |-.- +| ++...+ ....
T Consensus 159 ~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~---v~vRls~~~-~~~g- 233 (358)
T 4a3u_A 159 RHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKER---TAVRLSPNG-EIQG- 233 (358)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGG---EEEEECCSS-CBTT-
T ss_pred HHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccc---eEEEeccCc-ccCC-
Confidence 378999999999988653 5787788889998887752 1100 11 222111 1110
Q ss_pred cccccCCCHHH---HHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 59 DYEAKLTDVNQ---AEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 59 ~~~~~~T~pee---a~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
.....+.++ ..+-++..|+|++-++-|+.++.+... ...+ ..++|++.+ ..|++.-| +.+.++..++
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~--~a~~ik~~~---~~~v~~~g--~~~~~~ae~~ 303 (358)
T 4a3u_A 234 --TVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKT-DQPK--LSPEIRKVF---KPPLVLNQ--DYTFETAQAA 303 (358)
T ss_dssp --BCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBC-SSCC--CHHHHHHHC---CSCEEEES--SCCHHHHHHH
T ss_pred --CcccchHHHHHHHHHhhhccCccccccccccccCccccc-ccHH--HHHHHHHhc---CCcEEEeC--CCCHHHHHHH
Confidence 001112222 233355679999999999998887642 3333 357788776 47777644 5578889999
Q ss_pred HhcCC-eEeecchHH
Q 029526 136 IERGV-RKFNVNTEV 149 (192)
Q Consensus 136 i~~Gi-~KINi~T~l 149 (192)
++.|. -=|=++..+
T Consensus 304 l~~G~aD~V~~gR~~ 318 (358)
T 4a3u_A 304 LDSGVADAISFGRPF 318 (358)
T ss_dssp HHHTSCSEEEESHHH
T ss_pred HHcCCceEeHhhHHH
Confidence 99984 466666554
No 109
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.43 E-value=0.81 Score=39.31 Aligned_cols=111 Identities=14% Similarity=0.053 Sum_probs=71.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCC--------C--------CCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKY--------P--------SSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS 128 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y--------~--------~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~ 128 (192)
.++++|+. +.+.|+|.+-++. ||.. . .....-.++.|.++++.+. ++|++.=||-..+
T Consensus 190 ~~~~~a~~-a~~~Gad~I~v~~---~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~--~ipvia~GGI~~~ 263 (349)
T 1p0k_A 190 MSKASAGK-LYEAGAAAVDIGG---YGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFP--ASTMIASGGLQDA 263 (349)
T ss_dssp CCHHHHHH-HHHHTCSEEEEEC------------------CCGGGGTTCSCCHHHHHHHHHHHCT--TSEEEEESSCCSH
T ss_pred CCHHHHHH-HHHcCCCEEEEcC---CCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcC--CCeEEEECCCCCH
Confidence 45888876 4578999999963 3321 0 0011124677888887652 5999988865544
Q ss_pred HHHHHHHHhcCCeEeecchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 129 AELIKGCIERGVRKFNVNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 129 ~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
+++.+++.+|..=|-++|.+....... .+ .-+....+.+.+.++..|...|..
T Consensus 264 -~d~~k~l~~GAd~V~iG~~~l~~~~~~------g~-~~~~~~~~~~~~~l~~~m~~~G~~ 316 (349)
T 1p0k_A 264 -LDVAKAIALGASCTGMAGHFLKALTDS------GE-EGLLEEIQLILEELKLIMTVLGAR 316 (349)
T ss_dssp -HHHHHHHHTTCSEEEECHHHHHHHHHH------HH-HHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHcCCCEEEEcHHHHHHHhhc------CH-HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 568888999999999999887654310 01 122344566666777778877753
No 110
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=94.39 E-value=0.64 Score=40.25 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=77.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++.+.||+.+-+...+-++++.++..+.|.+..- ...+.|.+ + ..| ++++|.+|+++ .
T Consensus 156 ~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDa--------n---------~~~-~~~~a~~~~~~l~~~ 217 (371)
T 2ovl_A 156 RFLAGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDA--------N---------MKW-TVDGAIRAARALAPF 217 (371)
T ss_dssp HHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEEC--------T---------TCS-CHHHHHHHHHHHGGG
T ss_pred HHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEEC--------C---------CCC-CHHHHHHHHHHHHhc
Confidence 4678899999998877678888887777776552 12222211 1 123 57888888654 5
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
|++++-= + -|.-|++-+++|++.+ ++|++.-+ |=.+.++++++++.| +.=||+.
T Consensus 218 ~i~~iEq----------P-~~~~d~~~~~~l~~~~---~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik 272 (371)
T 2ovl_A 218 DLHWIEE----------P-TIPDDLVGNARIVRES---GHTIAGGE-NLHTLYDFHNAVRAGSLTLPEPD 272 (371)
T ss_dssp CCSEEEC----------C-SCTTCHHHHHHHHHHH---CSCEEECT-TCCSHHHHHHHHHHTCCSEECCC
T ss_pred CCCEEEC----------C-CCcccHHHHHHHHhhC---CCCEEeCC-CCCCHHHHHHHHHcCCCCEEeeC
Confidence 8887741 1 2345899999999988 69988755 455688899999887 5566764
No 111
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.13 E-value=0.16 Score=44.39 Aligned_cols=82 Identities=13% Similarity=0.148 Sum_probs=58.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCc--CCC-CC-CC-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGN--VHG-KY-PS-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG 139 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt--~HG-~y-~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G 139 (192)
+++++|+.. .+.|+|++-|+.|. .|. .+ .+ ..| .+..|.++.+..+..++|++.=||-..+.+ +.+|+.+|
T Consensus 170 ~t~e~A~~a-~~aGaD~I~v~~g~G~~~~~r~~~g~~~p--~~~~l~~v~~~~~~~~ipvIa~GGI~~g~d-i~kAlalG 245 (351)
T 2c6q_A 170 VTGEMVEEL-ILSGADIIKVGIGPGSVCTTRKKTGVGYP--QLSAVMECADAAHGLKGHIISDGGCSCPGD-VAKAFGAG 245 (351)
T ss_dssp CSHHHHHHH-HHTTCSEEEECSSCSTTBCHHHHHCBCCC--HHHHHHHHHHHHHHTTCEEEEESCCCSHHH-HHHHHHTT
T ss_pred CCHHHHHHH-HHhCCCEEEECCCCCcCcCccccCCCCcc--HHHHHHHHHHHHhhcCCcEEEeCCCCCHHH-HHHHHHcC
Confidence 578999874 47899999887532 110 00 00 123 466777777765444799999998876655 89999999
Q ss_pred CeEeecchHHH
Q 029526 140 VRKFNVNTEVR 150 (192)
Q Consensus 140 i~KINi~T~l~ 150 (192)
..=+-++|.+.
T Consensus 246 A~~V~vG~~fl 256 (351)
T 2c6q_A 246 ADFVMLGGMLA 256 (351)
T ss_dssp CSEEEESTTTT
T ss_pred CCceeccHHHh
Confidence 99999999885
No 112
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=94.12 E-value=1.6 Score=37.61 Aligned_cols=114 Identities=17% Similarity=0.153 Sum_probs=79.5
Q ss_pred hhhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHh-CCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---h
Q 029526 2 EAIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHS-KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---E 76 (192)
Q Consensus 2 ~ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~-~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~ 76 (192)
++++ .||+.+=+...+-++++.++..+.|.+..-. ..+.|.+ + .. -++++|.+|++ +
T Consensus 152 ~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDa--------n---------~~-~~~~~a~~~~~~l~~ 213 (370)
T 1nu5_A 152 EMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDV--------N---------QG-WDEQTASIWIPRLEE 213 (370)
T ss_dssp HHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEEC--------T---------TC-CCHHHHHHHHHHHHH
T ss_pred HHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEEC--------C---------CC-CCHHHHHHHHHHHHh
Confidence 4667 9999999988877788888877777665432 2122221 1 12 25788888865 4
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
-+++++- .+ -|.-|++-+++|++.+ ++|++.-+ |=...++++++++.| +.=||+...
T Consensus 214 ~~i~~iE----------qP-~~~~~~~~~~~l~~~~---~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (370)
T 1nu5_A 214 AGVELVE----------QP-VPRANFGALRRLTEQN---GVAILADE-SLSSLSSAFELARDHAVDAFSLKLC 271 (370)
T ss_dssp HTCCEEE----------CC-SCTTCHHHHHHHHHHC---SSEEEEST-TCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred cCcceEe----------CC-CCcccHHHHHHHHHhC---CCCEEeCC-CCCCHHHHHHHHHhCCCCEEEEchh
Confidence 6888864 11 2445899999999887 69988765 557788999999887 667787543
No 113
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=94.11 E-value=0.81 Score=41.56 Aligned_cols=117 Identities=13% Similarity=0.104 Sum_probs=88.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|..+|-+.|.++++.|+. ...++++++||.+|..+=.|+ .|.+|+++ +-+.|.|.
T Consensus 125 ea~~~GAD~ILLi~a~l~~----~~l~~l~~~a~~lgm~~LvEv-------------------h~~eE~~~-A~~lga~i 180 (452)
T 1pii_A 125 LARYYQADACLLMLSVLDD----DQYRQLAAVAHSLEMGVLTEV-------------------SNEEEQER-AIALGAKV 180 (452)
T ss_dssp HHHHTTCSEEEEETTTCCH----HHHHHHHHHHHHTTCEEEEEE-------------------CSHHHHHH-HHHTTCSE
T ss_pred HHHHcCCCEEEEEcccCCH----HHHHHHHHHHHHcCCeEEEEe-------------------CCHHHHHH-HHHCCCCE
Confidence 4678999999999999995 457899999999988777763 34466665 34679999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+.+.--|.|. -..|+++..++...+.. ++++|-=||-.. .++++++.++ +.=+=|++.+..
T Consensus 181 IGinnr~L~t------~~~dl~~~~~L~~~ip~-~~~vIaEsGI~t-~edv~~~~~~-a~avLVGealmr 241 (452)
T 1pii_A 181 VGINNRDLRD------LSIDLNRTRELAPKLGH-NVTVISESGINT-YAQVRELSHF-ANGFLIGSALMA 241 (452)
T ss_dssp EEEESEETTT------TEECTHHHHHHHHHHCT-TSEEEEESCCCC-HHHHHHHTTT-CSEEEECHHHHT
T ss_pred EEEeCCCCCC------CCCCHHHHHHHHHhCCC-CCeEEEECCCCC-HHHHHHHHHh-CCEEEEcHHHcC
Confidence 8888766653 45689999998887632 467775554443 5779999999 998999998853
No 114
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=94.09 E-value=1.4 Score=38.13 Aligned_cols=116 Identities=9% Similarity=-0.030 Sum_probs=77.4
Q ss_pred hhhhcCCCEeEeeCCCC------CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh
Q 029526 2 EAIVLGFDSLMVDGSHL------PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID 75 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l------~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~ 75 (192)
++++.||+.|=+...+- ++++.++..+.|.+..-. ++.+=.+. + ..+ ++++|.+|++
T Consensus 159 ~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~-d~~l~vDa------n---------~~~-~~~~a~~~~~ 221 (382)
T 1rvk_A 159 TLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGP-DIRLMIDA------F---------HWY-SRTDALALGR 221 (382)
T ss_dssp HHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCT-TSEEEEEC------C---------TTC-CHHHHHHHHH
T ss_pred HHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCC-CCeEEEEC------C---------CCC-CHHHHHHHHH
Confidence 46788999999987763 567777766666654421 23222211 1 123 5889988865
Q ss_pred h---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcC-CeEeecchHH
Q 029526 76 E---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 76 ~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~G-i~KINi~T~l 149 (192)
. .+++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+ .++++++++.| +.=||+....
T Consensus 222 ~l~~~~i~~iE~----------P-~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~~i~~~~~d~v~ik~~~ 285 (382)
T 1rvk_A 222 GLEKLGFDWIEE----------P-MDEQSLSSYKWLSDNL---DIPVVG-PESAAGKHWHRAEWIKAGACDILRTGVND 285 (382)
T ss_dssp HHHTTTCSEEEC----------C-SCTTCHHHHHHHHHHC---SSCEEE-CSSCSSHHHHHHHHHHTTCCSEEEECHHH
T ss_pred HHHhcCCCEEeC----------C-CChhhHHHHHHHHhhC---CCCEEE-eCCccCcHHHHHHHHHcCCCCEEeeCchh
Confidence 4 58887741 1 2345899999999887 699888 555566 78899999887 6667775433
No 115
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=94.08 E-value=0.94 Score=39.53 Aligned_cols=114 Identities=7% Similarity=0.062 Sum_probs=79.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.+-+-..+-++++.++..+.|.+..-. ++.+=.+. + ..| ++++|.+|+++ -+
T Consensus 175 ~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~-~~~l~vDa------n---------~~~-~~~~a~~~~~~l~~~~ 237 (392)
T 1tzz_A 175 GYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGK-DAQLAVDA------N---------GRF-NLETGIAYAKMLRDYP 237 (392)
T ss_dssp HHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTT-TCEEEEEC------T---------TCC-CHHHHHHHHHHHTTSC
T ss_pred HHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCC-CCeEEEEC------C---------CCC-CHHHHHHHHHHHHHcC
Confidence 46788999999988776778888877777665522 23222111 1 123 58899999765 47
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-----CeEeecch
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-----VRKFNVNT 147 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-----i~KINi~T 147 (192)
++++- .+ -|.-|++-+++|++.+ ++|++.-+ |=...++++++++.| +.=||+..
T Consensus 238 i~~iE----------qP-~~~~d~~~~~~l~~~~---~iPIa~dE-~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 238 LFWYE----------EV-GDPLDYALQAALAEFY---PGPMATGE-NLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp CSEEE----------CC-SCTTCHHHHHHHTTTC---CSCEEECT-TCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred CCeec----------CC-CChhhHHHHHHHHhhC---CCCEEECC-CCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 88764 11 2335899999998877 69998855 557888999999988 67777753
No 116
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=94.03 E-value=0.6 Score=40.11 Aligned_cols=114 Identities=12% Similarity=0.082 Sum_probs=77.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++.+.||+.|-+-..+-++++.++..+.|.+..-. ++.+=... + ..| ++++|.+|+++ .|
T Consensus 154 ~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~-~~~l~vDa------n---------~~~-~~~~a~~~~~~l~~~~ 216 (359)
T 1mdl_A 154 TAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGD-DFGIMVDY------N---------QSL-DVPAAIKRSQALQQEG 216 (359)
T ss_dssp HHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCS-SSEEEEEC------T---------TCS-CHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCC-CCEEEEEC------C---------CCC-CHHHHHHHHHHHHHhC
Confidence 56788999999987765677777777777665521 33331110 1 123 57888888654 58
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
++++-=. -|.-|++-+++|++.+ ++|++.-+. =.+.++++++++.| +.=||+..
T Consensus 217 i~~iE~P-----------~~~~~~~~~~~l~~~~---~iPI~~de~-~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 217 VTWIEEP-----------TLQHDYEGHQRIQSKL---NVPVQMGEN-WLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp CSCEECC-----------SCTTCHHHHHHHHHTC---SSCEEECTT-CCSHHHHHHHHHTTCCSEECCBT
T ss_pred CCeEECC-----------CChhhHHHHHHHHHhC---CCCEEeCCC-CCCHHHHHHHHHcCCCCEEeecc
Confidence 8877311 1335899999999887 699887554 45688899999887 55677753
No 117
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=94.00 E-value=0.16 Score=44.90 Aligned_cols=78 Identities=21% Similarity=0.387 Sum_probs=56.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCC-CCCCC---HHHHHHHHhhhccCCccEEeec-CCCCCHHHHHHHHhcC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSS-GPNLK---LDLLKDLHALSSKKGVLLVLHG-ASGLSAELIKGCIERG 139 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~-~p~ld---~~~L~~I~~~~~~~~iPLVlHG-gSG~~~e~~~~~i~~G 139 (192)
.+++++++.++.-+.|++++-+=...+...+. .+.+. ++.|++|++.+ ++|+++=| |.|++.++.+++.+.|
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~---~vPVivK~vG~g~s~~~A~~l~~aG 211 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL---SVPIIVKESGNGISMETAKLLYSYG 211 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC---SSCEEEECSSSCCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc---CCCEEEEeCCCCCCHHHHHHHHhCC
Confidence 56889999998889999998865443333221 12222 44556666555 79999875 4578999999999999
Q ss_pred CeEeec
Q 029526 140 VRKFNV 145 (192)
Q Consensus 140 i~KINi 145 (192)
+.=|.+
T Consensus 212 ad~I~V 217 (368)
T 3vkj_A 212 IKNFDT 217 (368)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 999988
No 118
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=93.93 E-value=0.36 Score=42.33 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=58.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCC-CCCCCCCCCHHHHHHHHhh-------hccCCccEEeecCCCCCHHHHHHH
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGK-YPSSGPNLKLDLLKDLHAL-------SSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~-y~~~~p~ld~~~L~~I~~~-------~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
..+|++|+..+ +.|+|.+-|+.|- |+. +..+...-.++.|.++.+. ++..++|+..=||-..+ +++.++
T Consensus 219 i~t~e~a~~~~-~~Gad~i~vg~Gg-~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~-~dv~ka 295 (393)
T 2qr6_A 219 VNDYTTALHMM-RTGAVGIIVGGGE-NTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENS-GDVVKA 295 (393)
T ss_dssp CCSHHHHHHHH-TTTCSEEEESCCS-CCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSH-HHHHHH
T ss_pred cCCHHHHHHHH-HcCCCEEEECCCc-ccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCH-HHHHHH
Confidence 36789998876 5899999996543 432 1111112257777777776 41102999988876655 469999
Q ss_pred HhcCCeEeecchHHHH
Q 029526 136 IERGVRKFNVNTEVRK 151 (192)
Q Consensus 136 i~~Gi~KINi~T~l~~ 151 (192)
+.+|..=+.++|.+..
T Consensus 296 lalGA~~V~iG~~~l~ 311 (393)
T 2qr6_A 296 IACGADAVVLGSPLAR 311 (393)
T ss_dssp HHHTCSEEEECGGGGG
T ss_pred HHcCCCEEEECHHHHc
Confidence 9999999999999743
No 119
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=93.78 E-value=1.3 Score=38.67 Aligned_cols=114 Identities=10% Similarity=-0.025 Sum_probs=78.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++++.||+.|-+-...-++++.++..+.|.+..- ...+.|.+ + ..| ++++|.+|+++ .
T Consensus 172 ~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDa--------n---------~~~-~~~~a~~~~~~l~~~ 233 (393)
T 2og9_A 172 ASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDA--------N---------QQW-DRPTAQRMCRIFEPF 233 (393)
T ss_dssp HHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEEC--------T---------TCC-CHHHHHHHHHHHGGG
T ss_pred HHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEEC--------C---------CCC-CHHHHHHHHHHHHhh
Confidence 5678899999998776667777777776666542 22233311 1 123 58899888755 5
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
++|++-- + -|.-|++-+++|++.+ ++|++.= +|=.+.++++++++.| +.=||+...
T Consensus 234 ~i~~iE~----------P-~~~~~~~~~~~l~~~~---~iPIa~d-E~~~~~~~~~~~i~~~~~d~v~ik~~ 290 (393)
T 2og9_A 234 NLVWIEE----------P-LDAYDHEGHAALALQF---DTPIATG-EMLTSAAEHGDLIRHRAADYLMPDAP 290 (393)
T ss_dssp CCSCEEC----------C-SCTTCHHHHHHHHHHC---SSCEEEC-TTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred CCCEEEC----------C-CCcccHHHHHHHHHhC---CCCEEeC-CCcCCHHHHHHHHHCCCCCEEeeCcc
Confidence 8887741 1 2345899999999888 6998864 4555778999999888 666777543
No 120
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=93.77 E-value=0.32 Score=38.78 Aligned_cols=78 Identities=10% Similarity=0.135 Sum_probs=57.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
++|.+..+-+.+.|+|.+-+.--+.-|.+ ...+++.++++++.+ ++|++.=||-.. .+++.++.+.|+.=+=
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~~----~~~~~~~i~~l~~~~---~~pvia~GGi~~-~~~~~~~~~~Ga~~v~ 225 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGTG----LGYDVELIRRVADSV---RIPVIASGGAGR-VEHFYEAAAAGADAVL 225 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTTC----SCCCHHHHHHHHHHC---SSCEEEESCCCS-HHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCCc----CcCCHHHHHHHHHhc---CCCEEEeCCCCC-HHHHHHHHHcCCcHHH
Confidence 35555455566789999887432322322 234899999999887 699998886554 4889999999999999
Q ss_pred cchHHH
Q 029526 145 VNTEVR 150 (192)
Q Consensus 145 i~T~l~ 150 (192)
++|.+.
T Consensus 226 vgsal~ 231 (253)
T 1h5y_A 226 AASLFH 231 (253)
T ss_dssp ESHHHH
T ss_pred HHHHHH
Confidence 999884
No 121
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=93.75 E-value=0.31 Score=49.00 Aligned_cols=126 Identities=18% Similarity=0.195 Sum_probs=86.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+|+++|.+.|-+=.|.. |++..+..+++|++.|..|++-+...+..+|... ..++|+.+.++++ +.|
T Consensus 653 ~a~~~g~d~irif~sl~----~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r------~~~~~~~~~~~~~~~~~~G 722 (1165)
T 2qf7_A 653 QAAKGGIDLFRVFDCLN----WVENMRVSMDAIAEENKLCEAAICYTGDILNSAR------PKYDLKYYTNLAVELEKAG 722 (1165)
T ss_dssp HHHHHTCCEEEEECTTC----CGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTS------GGGCHHHHHHHHHHHHHTT
T ss_pred HHHhcCcCEEEEEeeHH----HHHHHHHHHHHHHhccceEEEEEEEeccccCCCC------CCCCHHHHHHHHHHHHHcC
Confidence 57788887765433432 4556677889999999988887754432233211 2367887777755 579
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHHHhcCCeEeec
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KINi 145 (192)
+|.|.++ -.=|.- .|.-=.++++.|++.+ ++||-+|+ .+|+.-...-.|++.|+.-|..
T Consensus 723 a~~i~l~--DT~G~~---~P~~~~~lv~~l~~~~---~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 723 AHIIAVK--DMAGLL---KPAAAKVLFKALREAT---GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp CSEEEEE--ETTCCC---CHHHHHHHHHHHHHHC---SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEe--CccCCc---CHHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEe
Confidence 9987764 333332 2544467778888777 58888777 8999999999999999998753
No 122
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.63 E-value=0.21 Score=40.43 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=77.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCC----CeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKG----MLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~g----v~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T 77 (192)
+++++|.+-|++....++-.+ .+.++ +.+| +++..-.|.|-- .+ +. +..-+++.+..+.+++.
T Consensus 90 ~~~~~Gad~V~lg~~~l~~p~------~~~~~-~~~g~~i~~~~d~~~~~v~~-~g----~~-~~~~~~~~e~~~~~~~~ 156 (241)
T 1qo2_A 90 KLRKLGYRRQIVSSKVLEDPS------FLKSL-REIDVEPVFSLDTRGGRVAF-KG----WL-AEEEIDPVSLLKRLKEY 156 (241)
T ss_dssp HHHHTTCCEEEECHHHHHCTT------HHHHH-HTTTCEEEEEEEEETTEECC-TT----CS-SCSCCCHHHHHHHHHTT
T ss_pred HHHHCCCCEEEECchHhhChH------HHHHH-HHcCCcEEEEEEecCCEEEE-CC----ce-ecCCCCHHHHHHHHHhC
Confidence 467888888888766443222 12233 3333 223322233311 00 00 11124667765557789
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc-----C-CeEeecchHHH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER-----G-VRKFNVNTEVR 150 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~-----G-i~KINi~T~l~ 150 (192)
|++.+-+.-=+.-|.+. ..|+++++++++.+ ++|++-=||-+.+ ++++++.+. | +.=+=+++.+.
T Consensus 157 G~~~i~~t~~~~~g~~~----g~~~~~i~~l~~~~---~iPvia~GGI~~~-~d~~~~~~~~~~~~G~adgv~vgsal~ 227 (241)
T 1qo2_A 157 GLEEIVHTEIEKDGTLQ----EHDFSLTKKIAIEA---EVKVLAAGGISSE-NSLKTAQKVHTETNGLLKGVIVGRAFL 227 (241)
T ss_dssp TCCEEEEEETTHHHHTC----CCCHHHHHHHHHHH---TCEEEEESSCCSH-HHHHHHHHHHHHTTTSEEEEEECHHHH
T ss_pred CCCEEEEEeecccccCC----cCCHHHHHHHHHhc---CCcEEEECCCCCH-HHHHHHHhcccccCCeEeEEEeeHHHH
Confidence 99988773212224443 23899999999988 6999988755543 668899888 9 99999999874
No 123
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.50 E-value=0.15 Score=41.30 Aligned_cols=78 Identities=17% Similarity=0.084 Sum_probs=58.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+|.+..+.+++.|+|+|-++=-+.-+.+ ...+++.+++|+ .+ ++|+.+=||-- +.+++.++.+.|+.+|-
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~~~----~~~~~~~i~~i~-~~---~ipvi~~Ggi~-~~~~~~~~~~~Gad~V~ 100 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAIEN----SGENLPVLEKLS-EF---AEHIQIGGGIR-SLDYAEKLRKLGYRRQI 100 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHHHC----CCTTHHHHHHGG-GG---GGGEEEESSCC-SHHHHHHHHHTTCCEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccccC----CchhHHHHHHHH-hc---CCcEEEECCCC-CHHHHHHHHHCCCCEEE
Confidence 47888777777899999988632222222 224688888887 55 69999988774 45689999999999999
Q ss_pred cchHHHH
Q 029526 145 VNTEVRK 151 (192)
Q Consensus 145 i~T~l~~ 151 (192)
+++.+..
T Consensus 101 lg~~~l~ 107 (241)
T 1qo2_A 101 VSSKVLE 107 (241)
T ss_dssp ECHHHHH
T ss_pred ECchHhh
Confidence 9998743
No 124
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=93.45 E-value=0.38 Score=43.19 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=83.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
+++++|.+-|.+|++.-.++..+...+++.+ .. ++.|= .|. ..+++.++..+ +.|+|
T Consensus 240 ~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~---~~p~~pvi--~G~----------------v~t~~~a~~~~-~~Gad 297 (491)
T 1zfj_A 240 ALFEAGADAIVIDTAHGHSAGVLRKIAEIRA---HFPNRTLI--AGN----------------IATAEGARALY-DAGVD 297 (491)
T ss_dssp HHHHHTCSEEEECCSCTTCHHHHHHHHHHHH---HCSSSCEE--EEE----------------ECSHHHHHHHH-HTTCS
T ss_pred HHHHcCCCeEEEeeecCcchhHHHHHHHHHH---HCCCCcEe--CCC----------------ccCHHHHHHHH-HcCCC
Confidence 4678899999999987666655544444433 33 44442 222 23457777655 79999
Q ss_pred EEEEecC--cCCCC--CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 81 ALAVCIG--NVHGK--YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 81 ~LAvaiG--t~HG~--y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
.+-|++| +.|+. +.. ...-.++.|+++.+..+..++|+..=||-..+. ++.+++.+|..=+=++|.+.
T Consensus 298 ~I~vg~g~g~~~~tr~~~~-~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~-di~kal~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 298 VVKVGIGPGSICTTRVVAG-VGVPQVTAIYDAAAVAREYGKTIIADGGIKYSG-DIVKALAAGGNAVMLGSMFA 369 (491)
T ss_dssp EEEECSSCCTTBCHHHHTC-CCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHH-HHHHHHHTTCSEEEESTTTT
T ss_pred EEEECccCCcceEEeeecC-CCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHH-HHHHHHHcCCcceeeCHHhh
Confidence 9988763 23321 011 112267888888876544479999999887665 58899999999999999886
No 125
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=92.90 E-value=1.3 Score=37.61 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=79.9
Q ss_pred hhhhcCCCEeEeeCCC-----------CCHHHHHHHHHHHHHHHHh-CCCeEEEeccccccCCCCCccccccccCCCHHH
Q 029526 2 EAIVLGFDSLMVDGSH-----------LPFKDNISHTKYISFLAHS-KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQ 69 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~-----------l~~eeNi~~Tk~vv~~Ah~-~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pee 69 (192)
+|.++ |+-|-+-+.. -.++.+.+.+.++++..++ .+++|-.=+-. |..+ .++.+
T Consensus 79 ~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--G~~~-----------~~~~~ 144 (318)
T 1vhn_A 79 ILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL--GWEK-----------NEVEE 144 (318)
T ss_dssp HHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES--CSSS-----------CCHHH
T ss_pred HHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC--CCCh-----------HHHHH
Confidence 35566 7777765431 1234556777788777665 45555444321 1111 11224
Q ss_pred HHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEeecchH
Q 029526 70 AEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFNVNTE 148 (192)
Q Consensus 70 a~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KINi~T~ 148 (192)
..+-+++.|+|.|.|.-|+.-+.|.+ ..+++.+++|++ ++|++.=||-- +.+++.++++ .|+.-|-+++.
T Consensus 145 ~a~~l~~~G~d~i~v~g~~~~~~~~~---~~~~~~i~~i~~-----~ipVi~~GgI~-s~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 145 IYRILVEEGVDEVFIHTRTVVQSFTG---RAEWKALSVLEK-----RIPTFVSGDIF-TPEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHHTTCCEEEEESSCTTTTTSS---CCCGGGGGGSCC-----SSCEEEESSCC-SHHHHHHHHHHHCCSEEEESGG
T ss_pred HHHHHHHhCCCEEEEcCCCccccCCC---CcCHHHHHHHHc-----CCeEEEECCcC-CHHHHHHHHHcCCCCEEEECHH
Confidence 44446789999999977766555653 246677777665 49999988644 4567888888 79999999997
Q ss_pred H
Q 029526 149 V 149 (192)
Q Consensus 149 l 149 (192)
+
T Consensus 216 ~ 216 (318)
T 1vhn_A 216 A 216 (318)
T ss_dssp G
T ss_pred H
Confidence 5
No 126
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=92.83 E-value=2.1 Score=36.64 Aligned_cols=81 Identities=16% Similarity=0.252 Sum_probs=54.7
Q ss_pred CCCHHHHHHHhhh---hCCcEEEEec-CcCCCCCCC-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc
Q 029526 64 LTDVNQAEEFIDE---TDIDALAVCI-GNVHGKYPS-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER 138 (192)
Q Consensus 64 ~T~peea~~Fv~~---TgvD~LAvai-Gt~HG~y~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~ 138 (192)
..+++++.+.+++ .|+|.+-+.. |.....|.+ +.+.++.+.|+++-+...+.++|+.+|-. .++.++.+++.
T Consensus 171 ~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~---~~~~i~~al~~ 247 (426)
T 2r8c_A 171 ADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY---TPAAIARAVRC 247 (426)
T ss_dssp CCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC---SHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC---ChHHHHHHHHc
Confidence 3678888888765 5888877653 333333321 13578888898887777667899999986 45667777777
Q ss_pred CCeEeecch
Q 029526 139 GVRKFNVNT 147 (192)
Q Consensus 139 Gi~KINi~T 147 (192)
|+.-|--.+
T Consensus 248 G~~~i~H~~ 256 (426)
T 2r8c_A 248 GVRTIEHGN 256 (426)
T ss_dssp TCSEEEECT
T ss_pred CCCEEecCC
Confidence 766554333
No 127
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=92.78 E-value=0.59 Score=37.50 Aligned_cols=123 Identities=18% Similarity=0.140 Sum_probs=78.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
++.++|.+.|-+.+..- ++. .+++++.++++|+.+=.+ .++ ..| |+++++..+. |+|.
T Consensus 78 ~~~~aGad~i~vh~~~~--~~~---~~~~~~~~~~~g~~~~~d--~l~-------------~~T-~~~~~~~~~~-g~d~ 135 (218)
T 3jr2_A 78 MAFEAGADWITVSAAAH--IAT---IAACKKVADELNGEIQIE--IYG-------------NWT-MQDAKAWVDL-GITQ 135 (218)
T ss_dssp HHHHHTCSEEEEETTSC--HHH---HHHHHHHHHHHTCEEEEE--CCS-------------SCC-HHHHHHHHHT-TCCE
T ss_pred HHHhcCCCEEEEecCCC--HHH---HHHHHHHHHHhCCcccee--eee-------------cCC-HHHHHHHHHc-Cccc
Confidence 46788888888877653 222 245666677666533111 111 234 7888886544 9998
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRKA 152 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~a 152 (192)
+.+-.|.--| .. ....-.+.|+.|++... .++|++.=|| +..++++++++.|..=+=+++.+..+
T Consensus 136 v~~~~~~~~~-~~--g~~~~~~~l~~i~~~~~-~~~pi~v~GG--I~~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 136 AIYHRSRDAE-LA--GIGWTTDDLDKMRQLSA-LGIELSITGG--IVPEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp EEEECCHHHH-HH--TCCSCHHHHHHHHHHHH-TTCEEEEESS--CCGGGGGGGTTSCEEEEEESGGGSHH
T ss_pred eeeeeccccc-cC--CCcCCHHHHHHHHHHhC-CCCCEEEECC--CCHHHHHHHHHcCCCEEEEchhhcCC
Confidence 8764332222 11 13334555666766542 2699999995 46788999999999999999988643
No 128
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=92.77 E-value=1.6 Score=35.40 Aligned_cols=121 Identities=17% Similarity=0.148 Sum_probs=75.6
Q ss_pred hhhhcCCCEeE--eeCCCC---CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCC--HHHHHHHh
Q 029526 2 EAIVLGFDSLM--VDGSHL---PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTD--VNQAEEFI 74 (192)
Q Consensus 2 ~ai~~GFtSVM--~D~S~l---~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~--peea~~Fv 74 (192)
+|+++|++-|- +.-|.+ .++.-.+..+++++.++ ++.|--.+.. ..+|+ ..++.+-+
T Consensus 78 ~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~--pv~vKvi~e~--------------~~l~~~~~~~~a~~a 141 (225)
T 1mzh_A 78 EAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP--SAVHKVIVET--------------PYLNEEEIKKAVEIC 141 (225)
T ss_dssp HHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT--TSEEEEECCG--------------GGCCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc--CceEEEEEeC--------------CCCCHHHHHHHHHHH
Confidence 57889998876 344432 44555555555655554 4544331111 01222 23445556
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
++.|+|++..+- |.|.+ ..+++.++.+++.++ .++|+..=||--. .++..+.++.|...|=++.
T Consensus 142 ~eaGad~I~tst----g~~~g---ga~~~~i~~v~~~v~-~~ipVia~GGI~t-~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 142 IEAGADFIKTST----GFAPR---GTTLEEVRLIKSSAK-GRIKVKASGGIRD-LETAISMIEAGADRIGTSS 205 (225)
T ss_dssp HHHTCSEEECCC----SCSSS---CCCHHHHHHHHHHHT-TSSEEEEESSCCS-HHHHHHHHHTTCSEEEESC
T ss_pred HHhCCCEEEECC----CCCCC---CCCHHHHHHHHHHhC-CCCcEEEECCCCC-HHHHHHHHHhCchHHHHcc
Confidence 678999995554 55543 257888899988873 2599999998885 5678888899988654443
No 129
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.76 E-value=0.64 Score=39.94 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=55.2
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCe
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVR 141 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~ 141 (192)
...||.+|.+.+-..|+|-+=- +|.-+ ...-.+++|+++.+..+ -++.+=-|.|+..+.+++.++ .|+.
T Consensus 164 ~~~d~~~Ale~Li~lGvdrILT-----SG~~~--~a~~Gl~~Lk~Lv~~a~---~rI~ImaGGGV~~~Ni~~l~~~tG~~ 233 (287)
T 3iwp_A 164 MVHDPMAALETLLTLGFERVLT-----SGCDS--SALEGLPLIKRLIEQAK---GRIVVMPGGGITDRNLQRILEGSGAT 233 (287)
T ss_dssp GCSCHHHHHHHHHHHTCSEEEE-----CTTSS--STTTTHHHHHHHHHHHT---TSSEEEECTTCCTTTHHHHHHHHCCS
T ss_pred ccCCHHHHHHHHHHcCCCEEEC-----CCCCC--ChHHhHHHHHHHHHHhC---CCCEEEECCCcCHHHHHHHHHhhCCC
Confidence 3468999999998989998776 45422 24567888998887763 233333566999999999987 9998
Q ss_pred Eeecc
Q 029526 142 KFNVN 146 (192)
Q Consensus 142 KINi~ 146 (192)
-+..+
T Consensus 234 ~~H~S 238 (287)
T 3iwp_A 234 EFHCS 238 (287)
T ss_dssp EEEEC
T ss_pred EEeEC
Confidence 88875
No 130
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=92.74 E-value=1.6 Score=37.76 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=87.6
Q ss_pred hhhhcCCCEeE----eeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEe--c-cccccCCCCCccccccccCCCHHH---HH
Q 029526 2 EAIVLGFDSLM----VDGSHLPFKDNISHTKYISFLAHSKGMLVEAE--L-GRLSGTEDGLTVEDYEAKLTDVNQ---AE 71 (192)
Q Consensus 2 ~ai~~GFtSVM----~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaE--l-G~i~g~e~~~~~~~~~~~~T~pee---a~ 71 (192)
+|+++|++-|- ++-..-.-.++++...++++-|+++|+++=+| + ...|+.- . .-++|+- +.
T Consensus 136 ~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v---~------~~~dp~~Va~aa 206 (307)
T 3fok_A 136 SMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKV---V------NDLSTDAVIQSV 206 (307)
T ss_dssp HHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEE---E------ECCSHHHHHHHH
T ss_pred HHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCc---C------CCCCHHHHHHHH
Confidence 68999998844 65333344999999999999999999999999 2 3322210 0 0156654 34
Q ss_pred HHhhhhCCc----EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC-C-HHH---HHHHHh-cCCe
Q 029526 72 EFIDETDID----ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL-S-AEL---IKGCIE-RGVR 141 (192)
Q Consensus 72 ~Fv~~TgvD----~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~-~e~---~~~~i~-~Gi~ 141 (192)
+-..+-|.| ++=+- |+ |.++++-+.+ ++|.|+=||+-. + ++- ++.+++ .|.+
T Consensus 207 RiAaELGADs~~tivK~~-------y~--------e~f~~Vv~a~---~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~ 268 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLP-------VV--------EEMERVMEST---TMPTLLLGGEGGNDPDATFASWEHALTLPGVR 268 (307)
T ss_dssp HHHHTCSSCCSSEEEEEE-------CC--------TTHHHHGGGC---SSCEEEECCSCC--CHHHHHHHHHHTTSTTEE
T ss_pred HHHHHhCCCcCCCEEEeC-------Cc--------HHHHHHHHhC---CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCe
Confidence 445567999 77663 43 2245565555 699999999986 3 333 345777 5877
Q ss_pred EeecchHHHHHHHHHhcCCCCChHHHHHHHH
Q 029526 142 KFNVNTEVRKAYMDSLSRPKSDLIHLMASAK 172 (192)
Q Consensus 142 KINi~T~l~~a~~~~~~~~~~~~~~~~~~~~ 172 (192)
=+=++-.+. +.|..||..+++...
T Consensus 269 Gv~vGRNIf-------Q~~~~dp~~~v~al~ 292 (307)
T 3fok_A 269 GLTVGRTLL-------YPQDGDVAAAVDTAA 292 (307)
T ss_dssp EEEECTTTS-------SCSSSCHHHHHHHHH
T ss_pred EEeechhhc-------cCCCCCHHHHHHHHH
Confidence 776664332 123456766554433
No 131
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=92.70 E-value=1.4 Score=38.36 Aligned_cols=114 Identities=13% Similarity=0.082 Sum_probs=76.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h-
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T- 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T- 77 (192)
++++.||+.|-+...+-++++.++..+.|.+..-. ++.+=.+. + ..| ++++|.+|+++ .
T Consensus 149 ~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~-d~~l~vDa------n---------~~~-~~~~a~~~~~~l~~~~ 211 (382)
T 2gdq_A 149 AQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGS-SITMILDA------N---------QSY-DAAAAFKWERYFSEWT 211 (382)
T ss_dssp HHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCT-TSEEEEEC------T---------TCC-CHHHHHTTHHHHTTCS
T ss_pred HHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCC-CCEEEEEC------C---------CCC-CHHHHHHHHHHHhhcc
Confidence 56788999999988765778888777777665521 22222110 1 123 48899888765 4
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+++++-= + -|.-|++-+++|++.+ ++|++.=+ |=.+.++++++++.| +.=||+..
T Consensus 212 ~i~~iEq----------P-~~~~d~~~~~~l~~~~---~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~ 267 (382)
T 2gdq_A 212 NIGWLEE----------P-LPFDQPQDYAMLRSRL---SVPVAGGE-NMKGPAQYVPLLSQRCLDIIQPDV 267 (382)
T ss_dssp CEEEEEC----------C-SCSSCHHHHHHHHTTC---SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCT
T ss_pred CCeEEEC----------C-CCcccHHHHHHHHhhC---CCCEEecC-CcCCHHHHHHHHHcCCCCEEecCc
Confidence 7776631 1 2345899999999887 69988754 446678899999887 56667643
No 132
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=92.65 E-value=0.27 Score=41.15 Aligned_cols=132 Identities=11% Similarity=0.084 Sum_probs=77.9
Q ss_pred hhhhcCCCEeEeeCCCCCH--HHHHHHHHHHHHHHHhCCCeEEEec------c-ccccCCCCCccccccccCCCHH-HHH
Q 029526 2 EAIVLGFDSLMVDGSHLPF--KDNISHTKYISFLAHSKGMLVEAEL------G-RLSGTEDGLTVEDYEAKLTDVN-QAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~--eeNi~~Tk~vv~~Ah~~gv~VEaEl------G-~i~g~e~~~~~~~~~~~~T~pe-ea~ 71 (192)
+.+ +|.+-|.++...+.- .-+-...+++++...+..+.|-... | .|.. . + +. +..-.+|. +..
T Consensus 92 ~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~-~-g---w~-~~t~~~~~~e~a 164 (260)
T 2agk_A 92 EWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAM-N-K---WQ-TLTDLELNADTF 164 (260)
T ss_dssp HHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEE-T-T---TT-EEEEEEESHHHH
T ss_pred HHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEE-c-C---Cc-cccCccHHHHHH
Confidence 346 888888888877753 0003444555554432223332222 1 2211 0 0 00 00012444 555
Q ss_pred HHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhh----ccCCccEEeecCCCCCHHHHHHHHhc--CCeEeec
Q 029526 72 EFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALS----SKKGVLLVLHGASGLSAELIKGCIER--GVRKFNV 145 (192)
Q Consensus 72 ~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~----~~~~iPLVlHGgSG~~~e~~~~~i~~--Gi~KINi 145 (192)
+.+++. ++.+.+-==+..|.|.+ | |++++++|.+.+ + +|+.--||-+.+++ ++++.+. |+..+=+
T Consensus 165 ~~~~~~-a~~il~t~i~~dG~~~G--~--d~eli~~l~~~~~~~~~---iPVIasGGi~s~ed-~~~l~~~~~G~~gviv 235 (260)
T 2agk_A 165 RELRKY-TNEFLIHAADVEGLCGG--I--DELLVSKLFEWTKDYDD---LKIVYAGGAKSVDD-LKLVDELSHGKVDLTF 235 (260)
T ss_dssp HHHTTT-CSEEEEEC-------CC--C--CHHHHHHHHHHHTTCSS---CEEEEESCCCCTHH-HHHHHHHHTTCEEEEC
T ss_pred HHHHHh-cCEEEEEeeccccCcCC--C--CHHHHHHHHHhhcccCC---ceEEEeCCCCCHHH-HHHHHHhcCCCCEEEe
Confidence 556666 99998854455566643 4 999999999887 5 99999999998876 7888877 9999999
Q ss_pred chHH
Q 029526 146 NTEV 149 (192)
Q Consensus 146 ~T~l 149 (192)
++.+
T Consensus 236 g~al 239 (260)
T 2agk_A 236 GSSL 239 (260)
T ss_dssp CTTB
T ss_pred eCCH
Confidence 9985
No 133
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=92.60 E-value=2.9 Score=36.58 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=73.7
Q ss_pred hhhhcCCCEeEeeCC----C--------CCHHHHHHHHHHHHHHHHh-C--CCeEEEeccccccCCCCCccccccccCCC
Q 029526 2 EAIVLGFDSLMVDGS----H--------LPFKDNISHTKYISFLAHS-K--GMLVEAELGRLSGTEDGLTVEDYEAKLTD 66 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S----~--------l~~eeNi~~Tk~vv~~Ah~-~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~ 66 (192)
++++.||+.|-+... . +..+.+++...++++..++ . ++.+=.+ .+ ..| +
T Consensus 159 ~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vD------an---------~~~-~ 222 (410)
T 2qq6_A 159 EAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAID------MH---------GRF-D 222 (410)
T ss_dssp HHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEE------CT---------TCC-C
T ss_pred HHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEE------CC---------CCC-C
Confidence 567889999998862 1 1112445555555555443 1 2222111 00 123 6
Q ss_pred HHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeE
Q 029526 67 VNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRK 142 (192)
Q Consensus 67 peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~K 142 (192)
+++|.+|+++ -+++++--. -|.-|++-+++|++.+ ++|++. |.+=...++++++++.| +.=
T Consensus 223 ~~~a~~~~~~l~~~~i~~iEeP-----------~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 223 IPSSIRFARAMEPFGLLWLEEP-----------TPPENLDALAEVRRST---STPICA-GENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp HHHHHHHHHHHGGGCCSEEECC-----------SCTTCHHHHHHHHTTC---SSCEEE-CTTCCSHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHHHHhhcCCCeEECC-----------CChhhHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHcCCCCE
Confidence 8899988654 578876521 2445899999999887 699888 55556788999999887 666
Q ss_pred eecchHH
Q 029526 143 FNVNTEV 149 (192)
Q Consensus 143 INi~T~l 149 (192)
||+....
T Consensus 288 v~ik~~~ 294 (410)
T 2qq6_A 288 VMPDVAK 294 (410)
T ss_dssp ECCBHHH
T ss_pred EecCccc
Confidence 7775433
No 134
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=92.58 E-value=1.7 Score=37.68 Aligned_cols=113 Identities=9% Similarity=0.043 Sum_probs=72.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
++.+.||+.|-+-... +++..++..+.|.+.+- ++.+= | ..+ ..| ++++|.+|++ +.|
T Consensus 157 ~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g--d~~l~-----v-D~n---------~~~-~~~~a~~~~~~l~~~~ 217 (384)
T 2pgw_A 157 VGHAQGERVFYLKVGR-GEKLDLEITAAVRGEIG--DARLR-----L-DAN---------EGW-SVHDAINMCRKLEKYD 217 (384)
T ss_dssp HHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTST--TCEEE-----E-ECT---------TCC-CHHHHHHHHHHHGGGC
T ss_pred HHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHcC--CcEEE-----E-ecC---------CCC-CHHHHHHHHHHHHhcC
Confidence 5678899999987654 55555544444433221 22221 1 111 123 5788888854 468
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
+|++--. -|.-|++.+++|++.+ ++|++.=+ +=.+.++++++++.| +.=||+...
T Consensus 218 i~~iEqP-----------~~~~~~~~~~~l~~~~---~iPI~~de-~i~~~~~~~~~i~~~~~d~v~ik~~ 273 (384)
T 2pgw_A 218 IEFIEQP-----------TVSWSIPAMAHVREKV---GIPIVADQ-AAFTLYDVYEICRQRAADMICIGPR 273 (384)
T ss_dssp CSEEECC-----------SCTTCHHHHHHHHHHC---SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CCEEeCC-----------CChhhHHHHHHHHhhC---CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEcch
Confidence 9987511 2445899999999888 69988644 455788999999887 666777543
No 135
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.55 E-value=1 Score=42.10 Aligned_cols=134 Identities=15% Similarity=0.176 Sum_probs=87.6
Q ss_pred hhhhcCCCEeEeeCCC---------------------CCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCcc
Q 029526 2 EAIVLGFDSLMVDGSH---------------------LPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTV 57 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~---------------------l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~ 57 (192)
+|.++||+-|-|-+.+ =++|...+...||++-.++. +..|-.=|.- .+ ...
T Consensus 164 ~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~---~~-~~~- 238 (690)
T 3k30_A 164 RSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITV---EE-EID- 238 (690)
T ss_dssp HHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEEC---CC-CST-
T ss_pred HHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECc---cc-cCC-
Confidence 6889999999996643 24788888999999888753 3444443322 11 110
Q ss_pred ccccccCCCHHHHHHHh---hhhCCcEEEEecCcCCCCCCC---CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHH
Q 029526 58 EDYEAKLTDVNQAEEFI---DETDIDALAVCIGNVHGKYPS---SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAEL 131 (192)
Q Consensus 58 ~~~~~~~T~peea~~Fv---~~TgvD~LAvaiGt~HG~y~~---~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~ 131 (192)
.-+ +++++.+|+ ++ ++|+|-++.|+.++.... ..+..+.+..++|++.+ ++|++.=|+-- +.++
T Consensus 239 ----~g~-~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pvi~~G~i~-~~~~ 308 (690)
T 3k30_A 239 ----GGI-TREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT---TKPVVGVGRFT-SPDA 308 (690)
T ss_dssp ----TSC-CHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC---SSCEEECSCCC-CHHH
T ss_pred ----CCC-CHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc---CCeEEEeCCCC-CHHH
Confidence 012 235555554 44 799999999985432111 01345667788888887 69988877543 3567
Q ss_pred HHHHHhcC-CeEeecchHHH
Q 029526 132 IKGCIERG-VRKFNVNTEVR 150 (192)
Q Consensus 132 ~~~~i~~G-i~KINi~T~l~ 150 (192)
..++++.| +.-|-++..+.
T Consensus 309 a~~~l~~g~~d~v~~gR~~~ 328 (690)
T 3k30_A 309 MVRQIKAGILDLIGAARPSI 328 (690)
T ss_dssp HHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHCCCcceEEEcHHhH
Confidence 88888887 77788887763
No 136
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=92.42 E-value=2.2 Score=37.51 Aligned_cols=107 Identities=14% Similarity=0.066 Sum_probs=73.2
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCC-----------------------CC--CCCCCCHHHHHHHHhhhccCCccEE
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKY-----------------------PS--SGPNLKLDLLKDLHALSSKKGVLLV 120 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y-----------------------~~--~~p~ld~~~L~~I~~~~~~~~iPLV 120 (192)
+|++|+. +.+.|+|.+.|+- ||.. .. +.|. ...|.++++.++ ++|+.
T Consensus 200 s~~~A~~-l~~aGad~I~V~g---~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt--~~~l~~v~~~~~--~ipvi 271 (368)
T 3vkj_A 200 SMETAKL-LYSYGIKNFDTSG---QGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPT--AASIMEVRYSVP--DSFLV 271 (368)
T ss_dssp CHHHHHH-HHHTTCCEEECCC---BTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBH--HHHHHHHHHHST--TCEEE
T ss_pred CHHHHHH-HHhCCCCEEEEeC---CCCCcccchhhhhcccccccchhhccccccccccH--HHHHHHHHHHcC--CCcEE
Confidence 5888877 5589999988753 1321 00 1121 245677777763 59999
Q ss_pred eecCCCCCHHHHHHHHhcCCeEeecchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 121 LHGASGLSAELIKGCIERGVRKFNVNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 121 lHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
.=||-..+ .++.+++.+|..=+.++|.+..+.... + .-.....+.+.+.++..|..+|..
T Consensus 272 a~GGI~~~-~d~~kal~lGA~~v~ig~~~l~~~~~G-------~-~~v~~~l~~l~~eL~~~m~~~G~~ 331 (368)
T 3vkj_A 272 GSGGIRSG-LDAAKAIALGADIAGMALPVLKSAIEG-------K-ESLEQFFRKIIFELKAAMMLTGSK 331 (368)
T ss_dssp EESSCCSH-HHHHHHHHHTCSEEEECHHHHHHHHHC-------H-HHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCH-HHHHHHHHcCCCEEEEcHHHHHHHhcC-------h-HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99987665 558889999999999999998765321 1 233445567777778888887764
No 137
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.40 E-value=0.15 Score=42.80 Aligned_cols=82 Identities=15% Similarity=0.137 Sum_probs=60.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEe----cCc-----------------CCCCCCCCC-------CCCCHHHHHHHHhhhccC
Q 029526 64 LTDVNQAEEFIDETDIDALAVC----IGN-----------------VHGKYPSSG-------PNLKLDLLKDLHALSSKK 115 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAva----iGt-----------------~HG~y~~~~-------p~ld~~~L~~I~~~~~~~ 115 (192)
.++|+++.++ .+.|+|.+.+. +|. .|| |.+.. ...+++.++++++.+
T Consensus 132 v~~~~~~~~a-~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g-~t~~~~~~~~~~~~~~~~~i~~l~~~~--- 206 (297)
T 2zbt_A 132 ARNLGEALRR-IAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQS-LREDELMAYAKEIGAPFELVKWVHDHG--- 206 (297)
T ss_dssp ESSHHHHHHH-HHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHH-SCGGGHHHHHHHHTCCHHHHHHHHHHS---
T ss_pred cCCHHHHHHH-HHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCC-cCCCCchhhhhcchhhHHHHHHHHHhc---
Confidence 4799999986 58899998774 111 233 32211 235788899998876
Q ss_pred CccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHH
Q 029526 116 GVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 116 ~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
++|+++=...|+ +.++++++.+.|+.=+=++|.+.
T Consensus 207 ~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~ 242 (297)
T 2zbt_A 207 RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIF 242 (297)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGG
T ss_pred CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHh
Confidence 689873344488 89999999999999999999885
No 138
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=92.38 E-value=3 Score=36.45 Aligned_cols=114 Identities=9% Similarity=-0.039 Sum_probs=77.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++++.||+.|=+-...-++++.++..+.|.+..- ...+.|.+ + ..| ++++|.+|+++ .
T Consensus 185 ~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDa--------n---------~~~-~~~~ai~~~~~l~~~ 246 (398)
T 2pp0_A 185 ISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDA--------N---------QQW-DRETAIRMGRKMEQF 246 (398)
T ss_dssp HHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEEC--------T---------TCS-CHHHHHHHHHHHGGG
T ss_pred HHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEEC--------C---------CCC-CHHHHHHHHHHHHHc
Confidence 5678899999998776677877777777666542 12222211 1 123 58899888655 5
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
+++++-- + -|.-|++-+++|++.+ ++|++.-+ |=...++++++++.| +.=||+...
T Consensus 247 ~i~~iEq----------P-~~~~d~~~~~~l~~~~---~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~ 303 (398)
T 2pp0_A 247 NLIWIEE----------P-LDAYDIEGHAQLAAAL---DTPIATGE-MLTSFREHEQLILGNASDFVQPDAP 303 (398)
T ss_dssp TCSCEEC----------C-SCTTCHHHHHHHHHHC---SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred CCceeeC----------C-CChhhHHHHHHHHhhC---CCCEEecC-CcCCHHHHHHHHHcCCCCEEEeCcc
Confidence 7887641 1 2345899999999887 69988755 455778999999888 566777543
No 139
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=92.34 E-value=0.12 Score=47.01 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=53.7
Q ss_pred HHHHHHhhhhCC-cEEEEecCcC--CCCCCCCCCCCCHHHHHHHHhhhccCCcc---EEeecCCCCC-------------
Q 029526 68 NQAEEFIDETDI-DALAVCIGNV--HGKYPSSGPNLKLDLLKDLHALSSKKGVL---LVLHGASGLS------------- 128 (192)
Q Consensus 68 eea~~Fv~~Tgv-D~LAvaiGt~--HG~y~~~~p~ld~~~L~~I~~~~~~~~iP---LVlHGgSG~~------------- 128 (192)
+-+.+..++.+- =.|.++-+.+ +|.|.+-.|..=...++++.+.. ++| ++|||-.|-|
T Consensus 35 ~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~---~vPv~pV~LhlDHg~~~~w~~~~~~~am~ 111 (450)
T 3txv_A 35 EAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRI---EFPREKILLGGDHLGPNPWKHLPADEAMA 111 (450)
T ss_dssp HHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHT---TCCGGGEEEEEEEESSGGGTTSCHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHc---CcCcccEEEECCCCCCcccccccHHHHHH
Confidence 345555566653 3566676654 68886411221123445565555 576 7999999988
Q ss_pred --HHHHHHHHhcCCeEeecchHH
Q 029526 129 --AELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 129 --~e~~~~~i~~Gi~KINi~T~l 149 (192)
.+.+++||+.|..||-|++..
T Consensus 112 ~a~e~i~~aI~AGFtSVMiD~S~ 134 (450)
T 3txv_A 112 KAEAMITAYAKAGFTKLHLDTSM 134 (450)
T ss_dssp HHHHHHHHHHTTTCCEEEECCCB
T ss_pred HHHHHHHHHHHcCCCEEEECCCC
Confidence 899999999999999998755
No 140
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=92.28 E-value=2.8 Score=35.46 Aligned_cols=117 Identities=16% Similarity=0.192 Sum_probs=89.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|-.+|-+.|.+-++.|+.++ .+++.++|+.+|..|=.|+ .|.+|.++-+ +.|.+.
T Consensus 121 eAr~~GADaILLI~a~L~~~~----l~~l~~~A~~lGl~~LvEV-------------------h~~~El~rAl-~~~a~i 176 (258)
T 4a29_A 121 DAYNLGADTVLLIVKILTERE----LESLLEYARSYGMEPLILI-------------------NDENDLDIAL-RIGARF 176 (258)
T ss_dssp HHHHHTCSEEEEEGGGSCHHH----HHHHHHHHHHTTCCCEEEE-------------------SSHHHHHHHH-HTTCSE
T ss_pred HHHHcCCCeeehHHhhcCHHH----HHHHHHHHHHHhHHHHHhc-------------------chHHHHHHHh-cCCCcE
Confidence 456689999999999999764 6799999999987765552 3446665544 579999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+-|.--|.| .-..|++...++...+.. ++++|- -||+ +.++++++.++|+.=+=|++.|..
T Consensus 177 IGINNRnL~------tf~vdl~~t~~L~~~ip~-~~~~Vs--ESGI~t~~dv~~l~~~G~~a~LVGealmr 238 (258)
T 4a29_A 177 IGIMSRDFE------TGEINKENQRKLISMIPS-NVVKVA--KLGISERNEIEELRKLGVNAFLISSSLMR 238 (258)
T ss_dssp EEECSBCTT------TCCBCHHHHHHHHTTSCT-TSEEEE--EESSCCHHHHHHHHHTTCCEEEECHHHHH
T ss_pred EEEeCCCcc------ccccCHHHHHHHHhhCCC-CCEEEE--cCCCCCHHHHHHHHHCCCCEEEECHHHhC
Confidence 988776664 366789998999887642 465664 4555 567799999999999999999864
No 141
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.15 E-value=2.6 Score=36.72 Aligned_cols=112 Identities=11% Similarity=0.100 Sum_probs=74.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++++.||+.|-+....-+.++.++..+.|.+..- ...+.|.+ + ..| ++++|.+|+++ .
T Consensus 159 ~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDa--------n---------~~~-~~~~a~~~~~~l~~~ 220 (391)
T 2qgy_A 159 KFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDL--------A---------VPE-DLDQTKSFLKEVSSF 220 (391)
T ss_dssp HHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEEC--------C---------CCS-CHHHHHHHHHHHGGG
T ss_pred HHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEc--------C---------CCC-CHHHHHHHHHHHHhc
Confidence 5678899999988653336777776666665442 12222211 1 123 57888888654 5
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
|++++--. -|.-|++-+++|++.+ ++|++.=+ |=.+.++++++++.| +.=||+.
T Consensus 221 ~i~~iEqP-----------~~~~d~~~~~~l~~~~---~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 221 NPYWIEEP-----------VDGENISLLTEIKNTF---NMKVVTGE-KQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp CCSEEECS-----------SCTTCHHHHHHHHHHC---SSCEEECT-TCCSHHHHHHHHHTTCCSEECCB
T ss_pred CCCeEeCC-----------CChhhHHHHHHHHhhC---CCCEEEcC-CcCCHHHHHHHHHcCCCCEEEEC
Confidence 88887411 1335899999999887 69988755 445678899999887 5566764
No 142
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.11 E-value=0.24 Score=39.33 Aligned_cols=78 Identities=14% Similarity=0.232 Sum_probs=57.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
+.+..++.+.+.+.|+|++=+=+ .-|.+.. .-...++.+++|++.+ +.|+.+|+..--+++.++.+.+.|+.-|
T Consensus 15 ~~~~~~~~~~~~~~G~~~i~~~~--~dg~~~~-~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~~i~~~~~~gad~v 88 (220)
T 2fli_A 15 YANFASELARIEETDAEYVHIDI--MDGQFVP-NISFGADVVASMRKHS---KLVFDCHLMVVDPERYVEAFAQAGADIM 88 (220)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEE--EBSSSSS-CBCBCHHHHHHHHTTC---CSEEEEEEESSSGGGGHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--ecCCCCC-ccccCHHHHHHHHHhC---CCCEEEEEeecCHHHHHHHHHHcCCCEE
Confidence 46677888888899999864433 3343332 1223388899998876 5899999987777777899999999999
Q ss_pred ecch
Q 029526 144 NVNT 147 (192)
Q Consensus 144 Ni~T 147 (192)
.+.+
T Consensus 89 ~vh~ 92 (220)
T 2fli_A 89 TIHT 92 (220)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 8854
No 143
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.05 E-value=0.16 Score=41.20 Aligned_cols=65 Identities=11% Similarity=0.191 Sum_probs=47.7
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCC---HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLK---LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld---~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
++|.+.+ +++|+.+.+ .+.+ ++.++++++.+. ++|+++=|| +..+++.++++.|+.=+=++|.+.
T Consensus 138 ~~d~vl~--~sv~pg~~g--~~~~~~~l~~i~~~~~~~~--~~pi~v~GG--I~~~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 138 PVELVLV--MTVEPGFGG--QKFMPEMMEKVRALRKKYP--SLDIEVDGG--LGPSTIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp CCSEEEE--ESSCTTCSS--CCCCGGGHHHHHHHHHHCT--TSEEEEESS--CSTTTHHHHHHHTCCEEEESHHHH
T ss_pred CCCEEEE--EeecCCCCc--ccCCHHHHHHHHHHHHhcC--CCCEEEECC--cCHHHHHHHHHcCCCEEEECHHHH
Confidence 7897764 777755442 3344 455566666552 599999995 555899999999999999999885
No 144
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.04 E-value=2.5 Score=32.93 Aligned_cols=47 Identities=17% Similarity=0.209 Sum_probs=36.8
Q ss_pred CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 101 KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 101 d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
.++.++++++... ++|++-=||-. .+++.++.+.|..=+=++|.+..
T Consensus 137 g~~~~~~l~~~~~--~~pvia~GGI~--~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 137 GPQFVKAMKGPFP--NVKFVPTGGVN--LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp HHHHHHHHHTTCT--TCEEEEBSSCC--TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CHHHHHHHHHhCC--CCcEEEcCCCC--HHHHHHHHHCCCCEEEECccccC
Confidence 4566677766542 59999988664 57899999999999999999863
No 145
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=92.00 E-value=0.36 Score=42.56 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=57.4
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCH----HHHHHHHhhhccCCccEEeec-CCCCCHHHHHHHHhcC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKL----DLLKDLHALSSKKGVLLVLHG-ASGLSAELIKGCIERG 139 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~----~~L~~I~~~~~~~~iPLVlHG-gSG~~~e~~~~~i~~G 139 (192)
++++++.+.++..|.|+|++-+-...-...+ .-.-+| +.|++|++.+ ++|+++=| |.|.+.++.+++.+.|
T Consensus 155 ~~~e~~~~~ve~~~adal~ihln~~qe~~~p-~Gd~~~~~~~~~I~~l~~~~---~~PVivK~vg~g~s~e~A~~l~~aG 230 (365)
T 3sr7_A 155 KPYQAGLQAVRDLQPLFLQVHINLMQELLMP-EGEREFRSWKKHLSDYAKKL---QLPFILKEVGFGMDVKTIQTAIDLG 230 (365)
T ss_dssp SCHHHHHHHHHHHCCSCEEEEECHHHHHTSS-SSCCCCHHHHHHHHHHHHHC---CSCEEEEECSSCCCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccccccCC-CCCCcHHHHHHHHHHHHHhh---CCCEEEEECCCCCCHHHHHHHHHcC
Confidence 5678999999999999999887543111111 122345 6777887776 79999985 4568999999999999
Q ss_pred CeEeec
Q 029526 140 VRKFNV 145 (192)
Q Consensus 140 i~KINi 145 (192)
+.=|-+
T Consensus 231 ad~I~V 236 (365)
T 3sr7_A 231 VKTVDI 236 (365)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 988866
No 146
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=91.66 E-value=2.2 Score=36.94 Aligned_cols=112 Identities=14% Similarity=0.071 Sum_probs=71.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh--CC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET--DI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T--gv 79 (192)
++++.||+.|-+...+-++++.++..+.|.+..-. ++.+=.+ .+ ..+ ++++|.+|+++. ++
T Consensus 155 ~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~-~~~l~vD------an---------~~~-~~~~a~~~~~~l~~~i 217 (378)
T 2qdd_A 155 EAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPD-GHRVTFD------VN---------RAW-TPAIAVEVLNSVRARD 217 (378)
T ss_dssp HHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCT-TCEEEEE------CT---------TCC-CHHHHHHHHTSCCCCC
T ss_pred HHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCC-CCEEEEe------CC---------CCC-CHHHHHHHHHHhCCCc
Confidence 46788999999987664566666655555443211 2222111 00 123 589999998765 33
Q ss_pred cEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 80 DALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 80 D~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
++ . .|--|++-+++|++.+ ++|++. +.|=.+.++++++++.| +.=||+...
T Consensus 218 -~i------------E-qP~~d~~~~~~l~~~~---~iPI~~-dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (378)
T 2qdd_A 218 -WI------------E-QPCQTLDQCAHVARRV---ANPIML-DECLHEFSDHLAAWSRGACEGVKIKPN 269 (378)
T ss_dssp -EE------------E-CCSSSHHHHHHHHTTC---CSCEEE-CTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred -EE------------E-cCCCCHHHHHHHHHhC---CCCEEE-CCCcCCHHHHHHHHHhCCCCEEEeccc
Confidence 32 1 1322999999999887 699888 45555688899999877 666777543
No 147
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=91.59 E-value=3 Score=36.28 Aligned_cols=117 Identities=16% Similarity=0.052 Sum_probs=73.3
Q ss_pred hhhhcCCCEeEeeCC-----CC---------CHHHHHHHHHHHHHHHHh-C--CCeEEEeccccccCCCCCccccccccC
Q 029526 2 EAIVLGFDSLMVDGS-----HL---------PFKDNISHTKYISFLAHS-K--GMLVEAELGRLSGTEDGLTVEDYEAKL 64 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S-----~l---------~~eeNi~~Tk~vv~~Ah~-~--gv~VEaElG~i~g~e~~~~~~~~~~~~ 64 (192)
++.+.||+.|-+... .. +.+.+++...++++..++ . ++.+=.+. + ..
T Consensus 156 ~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDa------n---------~~- 219 (403)
T 2ox4_A 156 KAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVEN------H---------GH- 219 (403)
T ss_dssp HHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC------T---------TC-
T ss_pred HHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEEC------C---------CC-
Confidence 467889999998742 11 113455555555555554 1 22222110 0 12
Q ss_pred CCHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-C
Q 029526 65 TDVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-V 140 (192)
Q Consensus 65 T~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i 140 (192)
-++++|.+|+++ -+++++-- + -|.-|++-+++|++.+ ++|++.= .+=.+.++++++++.| +
T Consensus 220 ~~~~~ai~~~~~l~~~~i~~iE~----------P-~~~~d~~~~~~l~~~~---~iPIa~d-E~~~~~~~~~~~i~~~~~ 284 (403)
T 2ox4_A 220 TDLVSAIQFAKAIEEFNIFFYEE----------I-NTPLNPRLLKEAKKKI---DIPLASG-ERIYSRWGFLPFLEDRSI 284 (403)
T ss_dssp SCHHHHHHHHHHHGGGCEEEEEC----------C-SCTTSTHHHHHHHHTC---CSCEEEC-TTCCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhhCCCEEeC----------C-CChhhHHHHHHHHHhC---CCCEEec-CCcCCHHHHHHHHHcCCC
Confidence 358899888655 57777641 1 2345889999999887 6999884 4446688999999887 6
Q ss_pred eEeecchHH
Q 029526 141 RKFNVNTEV 149 (192)
Q Consensus 141 ~KINi~T~l 149 (192)
.=||+....
T Consensus 285 d~v~ik~~~ 293 (403)
T 2ox4_A 285 DVIQPDLGT 293 (403)
T ss_dssp SEECCCHHH
T ss_pred CEEecCccc
Confidence 667776443
No 148
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=91.59 E-value=2.1 Score=37.26 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=73.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh-----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE----- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~----- 76 (192)
++++.||+.|-+...+-++++.++..+.|.+..- -++.+-.+. + ..| ++++|.+|+++
T Consensus 155 ~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G-~~~~l~vDa------n---------~~~-~~~~a~~~~~~l~~~g 217 (389)
T 2oz8_A 155 HAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVP-AGSKVMIDP------N---------EAW-TSKEALTKLVAIREAG 217 (389)
T ss_dssp HHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSC-TTCEEEEEC------T---------TCB-CHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhC-CCCeEEEEC------C---------CCC-CHHHHHHHHHHHHhcC
Confidence 4678899999998876567766665555544321 122222110 1 124 48889888654
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
-+++++- .+ -|.-|++-+++|++.+. ++|++.-+.- ..++++++++.| +.=||+.
T Consensus 218 ~~i~~iE----------qP-~~~~~~~~~~~l~~~~~--~iPIa~dE~~--~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 218 HDLLWVE----------DP-ILRHDHDGLRTLRHAVT--WTQINSGEYL--DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp CCCSEEE----------SC-BCTTCHHHHHHHHHHCC--SSEEEECTTC--CHHHHHHHHHTTCCSEEEEC
T ss_pred CCceEEe----------CC-CCCcCHHHHHHHHhhCC--CCCEEeCCCC--CHHHHHHHHHcCCCCEEEEC
Confidence 4566552 11 13348899999998762 4999887766 778899999888 6678886
No 149
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=91.50 E-value=0.14 Score=46.16 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=54.8
Q ss_pred CCHHHHHHH---hhhhCC-cEEEEecCcCC--CCCCCCCCCCCHHHHHHHHhhhccCCcc---EEeecCCCCCH------
Q 029526 65 TDVNQAEEF---IDETDI-DALAVCIGNVH--GKYPSSGPNLKLDLLKDLHALSSKKGVL---LVLHGASGLSA------ 129 (192)
Q Consensus 65 T~peea~~F---v~~Tgv-D~LAvaiGt~H--G~y~~~~p~ld~~~L~~I~~~~~~~~iP---LVlHGgSG~~~------ 129 (192)
.+++-++-- .++++- =.|.++-|.+- |.|.+..|..=...++.+.+.. ++| ++||+-.|-|.
T Consensus 22 ~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~---~vP~~~VaLHlDHg~~~~w~~~~ 98 (420)
T 2fiq_A 22 AHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKV---GFARERIILGGDHLGPNCWQQEN 98 (420)
T ss_dssp CCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHH---TCCGGGEEEEEEEESSGGGTTSB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHc---CcCcceEEEECCCCCCccccccc
Confidence 445544444 445543 35666666653 7786411322234445555555 688 99999999998
Q ss_pred ---------HHHHHHHhcCCeEeecchHH
Q 029526 130 ---------ELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 130 ---------e~~~~~i~~Gi~KINi~T~l 149 (192)
+.+++||+.|..+|-|+...
T Consensus 99 ~~~am~~a~e~i~~aI~aGFtSVMiD~S~ 127 (420)
T 2fiq_A 99 VDAAMEKSVELVKAYVRAGFSKIHLDASM 127 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred hhhhhhhHHHHHHHHHHhCCCEEEECCCC
Confidence 99999999999999998653
No 150
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=91.49 E-value=2.8 Score=36.82 Aligned_cols=111 Identities=11% Similarity=0.113 Sum_probs=71.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCC---------------CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCH
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPS---------------SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSA 129 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~---------------~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~ 129 (192)
.+|++|+. +.+.|+|++.|+-. |...- .+..-.++.|.+++.... ++|+..=||--.+.
T Consensus 218 ~s~e~A~~-l~~aGad~I~V~g~---GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~--~ipvia~GGI~~g~ 291 (365)
T 3sr7_A 218 MDVKTIQT-AIDLGVKTVDISGR---GGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMD--KVEILASGGIRHPL 291 (365)
T ss_dssp CCHHHHHH-HHHHTCCEEECCCB---C--------------CGGGTTCSCBHHHHHHHHGGGTT--TSEEEECSSCCSHH
T ss_pred CCHHHHHH-HHHcCCCEEEEeCC---CCcccchhhccccccccccccccccHHHHHHHHHHhcC--CCeEEEeCCCCCHH
Confidence 57888877 55889999987532 32110 000011245555544321 59999999887665
Q ss_pred HHHHHHHhcCCeEeecchHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhCCC
Q 029526 130 ELIKGCIERGVRKFNVNTEVRKAYMDSLSRPKSDLIHLMASAKEAMKAVVAEKMRLFGSS 189 (192)
Q Consensus 130 e~~~~~i~~Gi~KINi~T~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs~ 189 (192)
| +.|++.+|..=|.++|.+..+... . . ..-+....+.+++.++..|...|..
T Consensus 292 D-v~KaLalGAdaV~ig~~~l~a~~~---~-G---~~~v~~~l~~l~~eL~~~m~~~G~~ 343 (365)
T 3sr7_A 292 D-IIKALVLGAKAVGLSRTMLELVEQ---H-S---VHEVIAIVNGWKEDLRLIMCALNCQ 343 (365)
T ss_dssp H-HHHHHHHTCSEEEESHHHHHHHHH---S-C---HHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred H-HHHHHHcCCCEEEECHHHHHHHHh---c-C---hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5 888999999999999998776542 1 1 1223344567777888888888864
No 151
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=91.30 E-value=3.7 Score=35.88 Aligned_cols=112 Identities=15% Similarity=0.175 Sum_probs=78.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHh-CCCe-EEEeccccccCCCCCccccccccCCCHHHHHHHhhh---
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHS-KGML-VEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE--- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~-~gv~-VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~--- 76 (192)
++++.||+.+=+.-.. +.++.++..+.|.+..-. ..+. |.+ + ..+ ++++|.+|+++
T Consensus 152 ~~~~~G~~~~KiKvG~-~~~~d~~~v~avR~a~g~~~~l~~vDa--------n---------~~~-~~~~A~~~~~~l~~ 212 (391)
T 3gd6_A 152 QKLEQGFDVFRLYVGK-NLDADEEFLSRVKEEFGSRVRIKSYDF--------S---------HLL-NWKDAHRAIKRLTK 212 (391)
T ss_dssp HHHHTTCCEEEEECSS-CHHHHHHHHHHHHHHHGGGCEEEEEEC--------T---------TCS-CHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEeeCC-CHHHHHHHHHHHHHHcCCCCcEEEecC--------C---------CCc-CHHHHHHHHHHHHh
Confidence 4567899999888655 778888888777665532 2222 221 1 123 68899988654
Q ss_pred hCC--cEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 77 TDI--DALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 77 Tgv--D~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
.++ +++- -+ -|.-|++-+++|++.+ ++|+ |.|=...++++++++.| +.=||+....
T Consensus 213 ~~i~~~~iE---------qP--~~~~d~~~~~~l~~~~---~iPI---dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 213 YDLGLEMIE---------SP--APRNDFDGLYQLRLKT---DYPI---SEHVWSFKQQQEMIKKDAIDIFNISPVF 271 (391)
T ss_dssp CCSSCCEEE---------CC--SCTTCHHHHHHHHHHC---SSCE---EEECCCHHHHHHHHHHTCCSEEEECHHH
T ss_pred cCCCcceec---------CC--CChhhHHHHHHHHHHc---CCCc---CCCCCCHHHHHHHHHcCCCCEEEECchh
Confidence 567 6664 11 1334899999999887 6998 99999999999999877 6678887544
No 152
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=91.28 E-value=4.4 Score=34.67 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=77.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---h--
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---E-- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~-- 76 (192)
++++.||+.+=+-..+-++++.++..+.+.+..-. ++.+=.+ .+ ..| ++++|.+|++ +
T Consensus 150 ~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~-~~~l~vD------an---------~~~-~~~~a~~~~~~l~~~~ 212 (366)
T 1tkk_A 150 NYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGS-AVKLRLD------AN---------QGW-RPKEAVTAIRKMEDAG 212 (366)
T ss_dssp HHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCS-SSEEEEE------CT---------TCS-CHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCC-CCeEEEE------CC---------CCC-CHHHHHHHHHHHhhcC
Confidence 46778999998887655677778777777665421 2222111 01 123 5788888864 4
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
.+++++- - + -|.-|++-+++|++.+ ++|++.-+. =.+.++++++++.| +.=||+....
T Consensus 213 ~~i~~iE---------q-P-~~~~d~~~~~~l~~~~---~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~ 271 (366)
T 1tkk_A 213 LGIELVE---------Q-P-VHKDDLAGLKKVTDAT---DTPIMADES-VFTPRQAFEVLQTRSADLINIKLMK 271 (366)
T ss_dssp CCEEEEE---------C-C-SCTTCHHHHHHHHHHC---SSCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCceEEE---------C-C-CCcccHHHHHHHHhhC---CCCEEEcCC-CCCHHHHHHHHHhCCCCEEEeehhh
Confidence 5677663 1 1 2345899999999887 699988655 46778899999876 6778876433
No 153
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=91.22 E-value=2.7 Score=36.10 Aligned_cols=114 Identities=11% Similarity=0.168 Sum_probs=75.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH-HHhhh---h
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE-EFIDE---T 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~-~Fv~~---T 77 (192)
++++.||+.+=+...+ +.++.++..+.|.+..-. ++.+ .+- .+ ..| ++++|. +|+++ .
T Consensus 151 ~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~-~~~l-----~vD-an---------~~~-~~~~a~~~~~~~l~~~ 212 (369)
T 2p8b_A 151 SMIQKGYQSFKMKVGT-NVKEDVKRIEAVRERVGN-DIAI-----RVD-VN---------QGW-KNSANTLTALRSLGHL 212 (369)
T ss_dssp HHHHTTCCEEEEECCS-CHHHHHHHHHHHHHHHCT-TSEE-----EEE-CT---------TTT-BSHHHHHHHHHTSTTS
T ss_pred HHHHcCcCEEEEEeCC-CHHHHHHHHHHHHHHhCC-CCeE-----EEE-CC---------CCC-CHHHHHHHHHHHHHhC
Confidence 5678899999987654 567777777666655421 3333 110 11 123 367888 88655 5
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
|++++- .+ -|.-|++-+++|++.+ ++|++.-+ |=...++++++++.| +.=||+...
T Consensus 213 ~i~~iE----------qP-~~~~d~~~~~~l~~~~---~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 213 NIDWIE----------QP-VIADDIDAMAHIRSKT---DLPLMIDE-GLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp CCSCEE----------CC-BCTTCHHHHHHHHHTC---CSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCcEEE----------CC-CCcccHHHHHHHHHhC---CCCEEeCC-CCCCHHHHHHHHHhCCCCEEEeecc
Confidence 777664 11 2345889999999887 69988855 456788899999877 666777543
No 154
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=91.21 E-value=1.4 Score=43.31 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=85.8
Q ss_pred hhhcCCCEeEeeCCC----------CCHHHHHHHHHHHHHHHHhC-CCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 3 AIVLGFDSLMVDGSH----------LPFKDNISHTKYISFLAHSK-GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 3 ai~~GFtSVM~D~S~----------l~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+.++||+-|.+..|. ..+..+-+...++++..++. +++|=.=+ . ...++..+..
T Consensus 657 ~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~---~------------~~~~~~~~~a 721 (1025)
T 1gte_A 657 AEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKL---T------------PNVTDIVSIA 721 (1025)
T ss_dssp HHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEE---C------------SCSSCHHHHH
T ss_pred HHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEe---C------------CChHHHHHHH
Confidence 457899999988763 12335667777788777753 44443321 0 0234666766
Q ss_pred HHhhhhCCcEEEEecC----------------------cCCCCCCCCCCCC---CHHHHHHHHhhhccCCccEEeecCCC
Q 029526 72 EFIDETDIDALAVCIG----------------------NVHGKYPSSGPNL---KLDLLKDLHALSSKKGVLLVLHGASG 126 (192)
Q Consensus 72 ~Fv~~TgvD~LAvaiG----------------------t~HG~y~~~~p~l---d~~~L~~I~~~~~~~~iPLVlHGgSG 126 (192)
+-+++.|+|.+.++-. +.+|.|.+ +.+ -++.+.+|++.+. ++|++.=||-.
T Consensus 722 ~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg--~~~~~~~~~~v~~v~~~~~--~ipvi~~GGI~ 797 (1025)
T 1gte_A 722 RAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSG--TAIRPIALRAVTTIARALP--GFPILATGGID 797 (1025)
T ss_dssp HHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEES--GGGHHHHHHHHHHHHHHST--TCCEEEESSCC
T ss_pred HHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCc--ccchhHHHHHHHHHHHHcC--CCCEEEecCcC
Confidence 6778999999998411 33444443 222 1467888887763 59999999776
Q ss_pred CCHHHHHHHHhcCCeEeecchHHHH
Q 029526 127 LSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 127 ~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
.+ ++..+++..|..=|-++|.+..
T Consensus 798 s~-~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 798 SA-ESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp SH-HHHHHHHHTTCSEEEESHHHHT
T ss_pred CH-HHHHHHHHcCCCEEEEeecccc
Confidence 54 5578888899999999997764
No 155
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=91.16 E-value=0.21 Score=43.38 Aligned_cols=119 Identities=13% Similarity=0.210 Sum_probs=75.1
Q ss_pred ccCCCHHHHHHHhh--------------hhCCcEEEEecCcCCCCCCCCCCC----CCHHHHHHHHhhhc-cC------C
Q 029526 62 AKLTDVNQAEEFID--------------ETDIDALAVCIGNVHGKYPSSGPN----LKLDLLKDLHALSS-KK------G 116 (192)
Q Consensus 62 ~~~T~peea~~Fv~--------------~TgvD~LAvaiGt~HG~y~~~~p~----ld~~~L~~I~~~~~-~~------~ 116 (192)
.+|++||.+.++++ +.|+|++-+. ...|.+-+ |+ +=+..+++|-+.++ .. +
T Consensus 180 ~~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~i~i~--D~~~~~ls--p~~f~ef~~p~~k~i~~~i~~~~~~~g~~~ 255 (367)
T 1r3s_A 180 WLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLF--ESHAGHLG--PQLFNKFALPYIRDVAKQVKARLREAGLAP 255 (367)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE--ETTGGGSC--HHHHHHHTHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe--cCccccCC--HHHHHHHhHHHHHHHHHHHhhhhccccCCC
Confidence 46889999877665 4799976543 33332221 21 23334455555554 22 4
Q ss_pred ccEEeecCCCCCHHHHHHHHhcCCeEeecch--HHHHHHHHHhcC-----CCCChHHHHHHHHHHHHHHHHHHHHHhCC
Q 029526 117 VLLVLHGASGLSAELIKGCIERGVRKFNVNT--EVRKAYMDSLSR-----PKSDLIHLMASAKEAMKAVVAEKMRLFGS 188 (192)
Q Consensus 117 iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T--~l~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~i~~~gs 188 (192)
+|+++|.+-. ...+....++|+.-+|+.. ++..+... +.. .+.|+. ++....+.+++.+++.|+.||.
T Consensus 256 ~p~i~~~~G~--~~~l~~l~~~g~d~i~~d~~~dl~~a~~~-~g~~~~l~Gnldp~-~L~gt~e~i~~~v~~~l~~~g~ 330 (367)
T 1r3s_A 256 VPMIIFAKDG--HFALEELAQAGYEVVGLDWTVAPKKAREC-VGKTVTLQGNLDPC-ALYASEEEIGQLVKQMLDDFGP 330 (367)
T ss_dssp CCEEEEETTC--GGGHHHHTTSSCSEEECCTTSCHHHHHHH-HCSSSEEEEEECGG-GGGSCHHHHHHHHHHHHHHHCS
T ss_pred CCeEEEcCCc--HHHHHHHHhcCCCEEEeCCCCCHHHHHHH-cCCCeEEEeCCChH-HhcCCHHHHHHHHHHHHHHhCC
Confidence 9999996543 5678888999999999974 33333221 221 123663 4445678999999999999875
No 156
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=91.15 E-value=4.7 Score=35.08 Aligned_cols=114 Identities=14% Similarity=0.177 Sum_probs=75.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.|=+.... ++++.++..+.|.+..-. ++.+ .| ..+ ..| ++++|.+|+++ -+
T Consensus 155 ~~~~~Gf~~vKik~g~-~~~~~~e~v~avR~a~g~-d~~l-----~v-Dan---------~~~-~~~~a~~~~~~l~~~~ 216 (397)
T 2qde_A 155 AVLREGFHFVKLKAGG-PLKADIAMVAEVRRAVGD-DVDL-----FI-DIN---------GAW-TYDQALTTIRALEKYN 216 (397)
T ss_dssp HHHHHTCSCEEEECCS-CHHHHHHHHHHHHHHHCT-TSCE-----EE-ECT---------TCC-CHHHHHHHHHHHGGGC
T ss_pred HHHHhhhhheeecccC-CHHHHHHHHHHHHHhhCC-CCEE-----EE-ECC---------CCC-CHHHHHHHHHHHHhCC
Confidence 5678899999987653 667777776666555421 2222 11 001 123 68889888654 57
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
++++-= + -|.-|++-+++|++.+ ++|++.-+ |=.+.++++++++.| +.=||+...
T Consensus 217 i~~iEq----------P-~~~~~~~~~~~l~~~~---~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (397)
T 2qde_A 217 LSKIEQ----------P-LPAWDLDGMARLRGKV---ATPIYADE-SAQELHDLLAIINKGAADGLMIKTQ 272 (397)
T ss_dssp CSCEEC----------C-SCTTCHHHHHHHHTTC---SSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCEEEC----------C-CChhhHHHHHHHHhhC---CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEecc
Confidence 887641 1 2345899999999887 69988755 445678899999877 667787543
No 157
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=91.11 E-value=2.3 Score=37.15 Aligned_cols=67 Identities=10% Similarity=0.038 Sum_probs=48.5
Q ss_pred CHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++ -+++++-- + -|.-|++-+++|++.+ ++|++.=+. =.+.++++++++.| +.
T Consensus 230 ~~~~ai~~~~~l~~~~i~~iE~----------P-~~~~~~~~~~~l~~~~---~iPIa~dE~-~~~~~~~~~~i~~~~~d 294 (410)
T 2gl5_A 230 GTNSAIQFAKAIEKYRIFLYEE----------P-IHPLNSDNMQKVSRST---TIPIATGER-SYTRWGYRELLEKQSIA 294 (410)
T ss_dssp CHHHHHHHHHHHGGGCEEEEEC----------S-SCSSCHHHHHHHHHHC---SSCEEECTT-CCTTHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhcCCCeEEC----------C-CChhhHHHHHHHHhhC---CCCEEecCC-cCCHHHHHHHHHcCCCC
Confidence 58899888755 57777641 1 2445899999999988 699888554 44667899999887 55
Q ss_pred Eeecch
Q 029526 142 KFNVNT 147 (192)
Q Consensus 142 KINi~T 147 (192)
=||+..
T Consensus 295 ~v~ik~ 300 (410)
T 2gl5_A 295 VAQPDL 300 (410)
T ss_dssp EECCCT
T ss_pred EEecCc
Confidence 566643
No 158
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=91.06 E-value=4.9 Score=32.71 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=71.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.|+++|-+-|+.-.. ..++++.|+++|+.+= +| . .+|+|+.+ ..+-|+|.
T Consensus 84 ~A~~aGAd~v~~p~~----------d~~v~~~ar~~g~~~i--~G----------------v-~t~~e~~~-A~~~Gad~ 133 (224)
T 1vhc_A 84 LAKSSGADFVVTPGL----------NPKIVKLCQDLNFPIT--PG----------------V-NNPMAIEI-ALEMGISA 133 (224)
T ss_dssp HHHHHTCSEEECSSC----------CHHHHHHHHHTTCCEE--CE----------------E-CSHHHHHH-HHHTTCCE
T ss_pred HHHHCCCCEEEECCC----------CHHHHHHHHHhCCCEE--ec----------------c-CCHHHHHH-HHHCCCCE
Confidence 467777777754321 1456777777765431 11 1 34888877 55789999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc-CCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER-GVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~-Gi~KINi~T~l~ 150 (192)
+.+ |+. .+..-++.|++|++.+. ++|++-=| |+..+++...++. |+.=+= ++.+.
T Consensus 134 vk~--------Fpa-~~~gG~~~lk~l~~~~~--~ipvvaiG--GI~~~N~~~~l~agga~~v~-gS~i~ 189 (224)
T 1vhc_A 134 VKF--------FPA-EASGGVKMIKALLGPYA--QLQIMPTG--GIGLHNIRDYLAIPNIVACG-GSWFV 189 (224)
T ss_dssp EEE--------TTT-TTTTHHHHHHHHHTTTT--TCEEEEBS--SCCTTTHHHHHTSTTBCCEE-ECGGG
T ss_pred EEE--------eeC-ccccCHHHHHHHHhhCC--CCeEEEEC--CcCHHHHHHHHhcCCCEEEE-Echhc
Confidence 988 443 12224788999988774 59999888 5667899999998 766666 67664
No 159
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=91.05 E-value=1.7 Score=37.82 Aligned_cols=115 Identities=11% Similarity=-0.017 Sum_probs=72.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++.+.||+.|-+-....+.++ ++..+.|.+..-. ++.+=... + ..| ++++|.+|+++ .|
T Consensus 174 ~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~-d~~l~vDa------n---------~~~-~~~~a~~~~~~l~~~~ 235 (388)
T 2nql_A 174 YWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGP-QAKIAADM------H---------WNQ-TPERALELIAEMQPFD 235 (388)
T ss_dssp HHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCT-TSEEEEEC------C---------SCS-CHHHHHHHHHHHGGGC
T ss_pred HHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCC-CCEEEEEC------C---------CCC-CHHHHHHHHHHHhhcC
Confidence 467889999988765423444 5555555544311 22222211 1 123 57888888654 58
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
+|++-- + -|.-|++-+++|++.+ ++|++.-+ |=.+.++++++++.| +.=||+....
T Consensus 236 i~~iEq----------P-~~~~d~~~~~~l~~~~---~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~ 292 (388)
T 2nql_A 236 PWFAEA----------P-VWTEDIAGLEKVSKNT---DVPIAVGE-EWRTHWDMRARIERCRIAIVQPEMGH 292 (388)
T ss_dssp CSCEEC----------C-SCTTCHHHHHHHHTSC---CSCEEECT-TCCSHHHHHHHHTTSCCSEECCCHHH
T ss_pred CCEEEC----------C-CChhhHHHHHHHHhhC---CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEecCCC
Confidence 887741 1 1335899999999887 69988654 455778999999887 6667775544
No 160
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=91.01 E-value=0.19 Score=42.98 Aligned_cols=119 Identities=8% Similarity=0.075 Sum_probs=75.9
Q ss_pred ccCCCHHHHHHHhh--------------hhCCcEEEEecCcCCCCCCCCCCC----CCHHHHHHHHhhhccC-CccEEee
Q 029526 62 AKLTDVNQAEEFID--------------ETDIDALAVCIGNVHGKYPSSGPN----LKLDLLKDLHALSSKK-GVLLVLH 122 (192)
Q Consensus 62 ~~~T~peea~~Fv~--------------~TgvD~LAvaiGt~HG~y~~~~p~----ld~~~L~~I~~~~~~~-~iPLVlH 122 (192)
.+|.+||.+.++++ +.|+|.+-+ ....|.+-+ |+ +=+..+++|-+.++.. ++|+++|
T Consensus 162 ~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i--~d~~~~~ls--p~~f~ef~~p~~k~i~~~i~~~~g~~~i~~ 237 (338)
T 2eja_A 162 FMWENPKEYKRLMDILTETVLAYLKEQIKAGADVVQI--FDSWVNNLS--LEDYGEYVYPYVNYLISELKDFSDTPVIYF 237 (338)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE--EETTGGGSC--HHHHHHHTHHHHHHHHHHHHHHCCCCEEEE
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE--ecCccccCC--HHHHHHHhHHHHHHHHHHHhhcCCCCEEEE
Confidence 46899998777665 479996544 444433221 21 2223334555444332 6999999
Q ss_pred cCCCCCHHHHHHHHhcCCeEeecch--HHHHHHHHHhc---CCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Q 029526 123 GASGLSAELIKGCIERGVRKFNVNT--EVRKAYMDSLS---RPKSDLIHLMASAKEAMKAVVAEKMRLFGS 188 (192)
Q Consensus 123 GgSG~~~e~~~~~i~~Gi~KINi~T--~l~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~i~~~gs 188 (192)
. -|. ...+....+.|+.-+|++. ++..+...- + ..+.|+ .++....+.+++.+++.|+.+|.
T Consensus 238 ~-~g~-~~~l~~l~~~g~d~~~~d~~~dl~~~~~~~-~~~l~Gn~dp-~~l~gt~e~i~~~v~~~l~~~g~ 304 (338)
T 2eja_A 238 F-RGS-SSFIDLAVDYRADALSVDWSVDIPELFKIY-DKGFQGNLEP-AVLYASEEVIEEKTLGLLRRIPV 304 (338)
T ss_dssp E-SSH-HHHHHHHTTSCCSEEECCTTSCHHHHHHHC-CSEEECCBCG-GGGGSCHHHHHHHHHHHHTTCCC
T ss_pred c-CCc-HHHHHHHHHcCCCEEEeCCCCCHHHHHHhC-CeEEEECCCH-HHhcCCHHHHHHHHHHHHHHhCC
Confidence 6 455 7788899999999999974 444443322 2 134566 34455678999999999998875
No 161
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=91.01 E-value=1.7 Score=37.54 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=69.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---- 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---- 77 (192)
++.+.||+.+-+-... +.++.++..+.|.+..- -++.+ .| ..+ ..| ++++|.+|+++.
T Consensus 156 ~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g-~~~~l-----~v-Dan---------~~~-~~~~a~~~~~~l~~~~ 217 (371)
T 2ps2_A 156 KYRAKGYKGQSVKISG-EPVTDAKRITAALANQQ-PDEFF-----IV-DAN---------GKL-SVETALRLLRLLPHGL 217 (371)
T ss_dssp HHHTTTCCEEEEECCS-CHHHHHHHHHHHTTTCC-TTCEE-----EE-ECT---------TBC-CHHHHHHHHHHSCTTC
T ss_pred HHHHhChheEEeecCC-CHHHHHHHHHHHHHhcC-CCCEE-----EE-ECC---------CCc-CHHHHHHHHHHHHhhc
Confidence 4678899999987664 45555544443332211 02222 11 000 123 589999997665
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
++ ++- .|--|++-+++|++.+ ++|++.-+. =...++++++++.| +.=||+...
T Consensus 218 ~i-~iE-------------~P~~~~~~~~~l~~~~---~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~ 271 (371)
T 2ps2_A 218 DF-ALE-------------APCATWRECISLRRKT---DIPIIYDEL-ATNEMSIVKILADDAAEGIDLKIS 271 (371)
T ss_dssp CC-EEE-------------CCBSSHHHHHHHHTTC---CSCEEESTT-CCSHHHHHHHHHHTCCSEEEEEHH
T ss_pred CC-cCc-------------CCcCCHHHHHHHHhhC---CCCEEeCCC-cCCHHHHHHHHHhCCCCEEEechh
Confidence 55 542 1322999999999887 699888664 46778999999887 566777543
No 162
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=90.93 E-value=0.69 Score=38.12 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=57.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEe-cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 65 TDVNQAEEFIDETDIDALAVC-IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAva-iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.||-+..+...+-|+|.|-+- +.-+. . ....+++++++|.+.+ .+||-+=||-- +.+++++.++.|+.||
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~---~--~~~~~~~~i~~i~~~~---~~pl~vGGGIr-s~e~~~~~l~~GadkV 101 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAK---D--PSKRQFALIEKLAKEV---SVNLQVGGGIR-SKEEVKALLDCGVKRV 101 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHH---C--GGGCCHHHHHHHHHHC---CSEEEEESSCC-CHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCccc---c--cchhHHHHHHHHHHhc---CCCeEeccccc-cHHHHHHHHHcCCCEE
Confidence 689776666667799988764 22111 1 2345889999998887 69999988654 4578999999999999
Q ss_pred ecchHH
Q 029526 144 NVNTEV 149 (192)
Q Consensus 144 Ni~T~l 149 (192)
.++|..
T Consensus 102 ii~t~a 107 (243)
T 4gj1_A 102 VIGSMA 107 (243)
T ss_dssp EECTTT
T ss_pred EEcccc
Confidence 999965
No 163
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=90.88 E-value=0.77 Score=42.39 Aligned_cols=73 Identities=4% Similarity=0.068 Sum_probs=54.6
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEee
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFN 144 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KIN 144 (192)
.+.|++ +++.|+|.+.+ |+....+ ....|++++++|.+.+ ++|++--||-+.+++ ++++.+ .|+.-+=
T Consensus 455 ~e~a~~-~~~~Ga~~il~-----t~~~~dG~~~G~d~~li~~l~~~~---~iPVIasGGi~s~~d-~~~~~~~~G~~gvi 524 (555)
T 1jvn_A 455 WELTRA-CEALGAGEILL-----NCIDKDGSNSGYDLELIEHVKDAV---KIPVIASSGAGVPEH-FEEAFLKTRADACL 524 (555)
T ss_dssp HHHHHH-HHHTTCCEEEE-----CCGGGTTTCSCCCHHHHHHHHHHC---SSCEEECSCCCSHHH-HHHHHHHSCCSEEE
T ss_pred HHHHHH-HHHcCCCEEEE-----eCCCCCCCCCCCCHHHHHHHHHhC---CccEEEECCCCCHHH-HHHHHHhcCChHHH
Confidence 444444 67899998864 4443321 1224999999999988 699999998887765 788877 8999999
Q ss_pred cchHH
Q 029526 145 VNTEV 149 (192)
Q Consensus 145 i~T~l 149 (192)
+++.+
T Consensus 525 vg~a~ 529 (555)
T 1jvn_A 525 GAGMF 529 (555)
T ss_dssp ESHHH
T ss_pred HHHHH
Confidence 99866
No 164
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.88 E-value=0.61 Score=37.22 Aligned_cols=138 Identities=9% Similarity=0.060 Sum_probs=84.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEE--------Eecc----ccccCCCCCcccc----ccccCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVE--------AELG----RLSGTEDGLTVED----YEAKLT 65 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VE--------aElG----~i~g~e~~~~~~~----~~~~~T 65 (192)
+|+++|.+.|-+=-..++.++-.+.. .++++.+|+.+= .++| +++. ++...... ....-.
T Consensus 21 ~a~~~Gv~~v~lr~k~~~~~~~~~~i---~~l~~~~~~~livnd~~~~A~~~gadgvhl~~-~~~~~~~~~~~~ig~s~~ 96 (210)
T 3ceu_A 21 ALFEEGLDILHLRKPETPAMYSERLL---TLIPEKYHRRIVTHEHFYLKEEFNLMGIHLNA-RNPSEPHDYAGHVSCSCH 96 (210)
T ss_dssp HHHHTTCCEEEECCSSCCHHHHHHHH---HHSCGGGGGGEEESSCTTHHHHTTCSEEECCS-SSCSCCTTCCSEEEEEEC
T ss_pred HHHHCCCCEEEEccCCCCHHHHHHHH---HHHHHHhCCeEEEeCCHHHHHHcCCCEEEECc-cccccccccCCEEEEecC
Confidence 57889999999887777776655543 444555554331 0111 2321 21110000 001125
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCC-CCCCC-CCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHG-KYPSS-GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG-~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
+|+|+.+- + .|+|.+.+ |.+.- .-+++ .+.++++.|+++.+... .++|++.=|| +..++++++++.|..=|
T Consensus 97 t~~e~~~A-~-~GaDyv~~--g~vf~t~sk~~~~~~~g~~~l~~~~~~~~-~~iPviaiGG--I~~~nv~~~~~~Ga~gV 169 (210)
T 3ceu_A 97 SVEEVKNR-K-HFYDYVFM--SPIYDSISKVNYYSTYTAEELREAQKAKI-IDSKVMALGG--INEDNLLEIKDFGFGGA 169 (210)
T ss_dssp SHHHHHTT-G-GGSSEEEE--CCCC---------CCCCHHHHHHHHHTTC-SSTTEEEESS--CCTTTHHHHHHTTCSEE
T ss_pred CHHHHHHH-h-hCCCEEEE--CCcCCCCCCCCCCCCCCHHHHHHHHHhcC-CCCCEEEECC--CCHHHHHHHHHhCCCEE
Confidence 78888764 4 79998875 33210 00111 14589999999987620 1699999995 45788999999999999
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
=+.+.+.
T Consensus 170 av~s~i~ 176 (210)
T 3ceu_A 170 VVLGDLW 176 (210)
T ss_dssp EESHHHH
T ss_pred EEhHHhH
Confidence 9999885
No 165
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=90.88 E-value=4.8 Score=34.78 Aligned_cols=121 Identities=16% Similarity=0.149 Sum_probs=81.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---- 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---- 77 (192)
++++.||+.+=+.-...++++.++..+.|.+..- ++. | .| ..+ ..+ ++++|.+|+++.
T Consensus 153 ~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~--~~~----l-~v-DaN---------~~~-~~~~A~~~~~~L~~~~ 214 (365)
T 3ik4_A 153 AILARGIKSIKVKTAGVDVAYDLARLRAIHQAAP--TAP----L-IV-DGN---------CGY-DVERALAFCAACKAES 214 (365)
T ss_dssp HHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSS--SCC----E-EE-ECT---------TCC-CHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCC--CCe----E-EE-ECC---------CCC-CHHHHHHHHHHHhhCC
Confidence 3567899999988877778888888877766542 111 1 11 111 123 588999997665
Q ss_pred -CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHHHHHH
Q 029526 78 -DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRKAYMD 155 (192)
Q Consensus 78 -gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~a~~~ 155 (192)
++.++= -+ -|.-|++-++++++.+ ++|+++ |-|=.+..+++++++.| +.=||+.... -.++.
T Consensus 215 ~~i~~iE----------eP-~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~ 278 (365)
T 3ik4_A 215 IPMVLFE----------QP-LPREDWAGMAQVTAQS---GFAVAA-DESARSAHDVLRIAREGTASVINIKLMK-AGVAE 278 (365)
T ss_dssp CCEEEEE----------CC-SCTTCHHHHHHHHHHS---SSCEEE-STTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHH
T ss_pred CCceEEE----------CC-CCcccHHHHHHHHhhC---CCCEEE-CCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHH
Confidence 444443 11 2334899999999887 699988 67777888999998876 7778887554 33433
Q ss_pred H
Q 029526 156 S 156 (192)
Q Consensus 156 ~ 156 (192)
+
T Consensus 279 ~ 279 (365)
T 3ik4_A 279 G 279 (365)
T ss_dssp H
T ss_pred H
Confidence 3
No 166
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=90.87 E-value=6.5 Score=34.75 Aligned_cols=123 Identities=14% Similarity=0.064 Sum_probs=80.2
Q ss_pred hhhhcCCCEeEeeCCCCC------HHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh
Q 029526 2 EAIVLGFDSLMVDGSHLP------FKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID 75 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~------~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~ 75 (192)
++++.||+.+=+...+-| +++.++..+.|-+..-+ ++.+=.+ .+ ..+ ++++|.+|++
T Consensus 189 ~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~-d~~L~vD------aN---------~~~-~~~~Ai~~~~ 251 (412)
T 3stp_A 189 EAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGY-DNDLMLE------CY---------MGW-NLDYAKRMLP 251 (412)
T ss_dssp HHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCS-SSEEEEE------CT---------TCS-CHHHHHHHHH
T ss_pred HHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCC-CCeEEEE------CC---------CCC-CHHHHHHHHH
Confidence 467789999999876544 35666666665554421 2322221 01 123 6889988865
Q ss_pred ---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHH
Q 029526 76 ---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRK 151 (192)
Q Consensus 76 ---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~ 151 (192)
+-+++++--- -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+.....-
T Consensus 252 ~Le~~~i~~iEeP-----------~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~li~~~a~D~v~ik~~~~G 316 (412)
T 3stp_A 252 KLAPYEPRWLEEP-----------VIADDVAGYAELNAMN---IVPISG-GEHEFSVIGCAELINRKAVSVLQYDTNRVG 316 (412)
T ss_dssp HHGGGCCSEEECC-----------SCTTCHHHHHHHHHTC---SSCEEE-CTTCCSHHHHHHHHHTTCCSEECCCHHHHT
T ss_pred HHHhcCCCEEECC-----------CCcccHHHHHHHHhCC---CCCEEe-CCCCCCHHHHHHHHHcCCCCEEecChhhcC
Confidence 4688888521 1333899999999887 699876 66667888999999887 777888665543
Q ss_pred HHHHH
Q 029526 152 AYMDS 156 (192)
Q Consensus 152 a~~~~ 156 (192)
.++.+
T Consensus 317 Git~a 321 (412)
T 3stp_A 317 GITAA 321 (412)
T ss_dssp HHHHH
T ss_pred CHHHH
Confidence 34433
No 167
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=90.86 E-value=2.9 Score=36.47 Aligned_cols=115 Identities=16% Similarity=0.063 Sum_probs=71.9
Q ss_pred hhhhcCCCEeEeeCC-----CC---------CHHHHHHHHHHHHHHHHh-C--CCeEEEeccccccCCCCCccccccccC
Q 029526 2 EAIVLGFDSLMVDGS-----HL---------PFKDNISHTKYISFLAHS-K--GMLVEAELGRLSGTEDGLTVEDYEAKL 64 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S-----~l---------~~eeNi~~Tk~vv~~Ah~-~--gv~VEaElG~i~g~e~~~~~~~~~~~~ 64 (192)
++.+.||+.|=+... .. +.+.+++...++++..++ . ++.+=.+. + .-
T Consensus 162 ~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDa------n----------~~ 225 (407)
T 2o56_A 162 TAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEM------H----------AF 225 (407)
T ss_dssp HHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC------T----------TC
T ss_pred HHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEEC------C----------CC
Confidence 567889999998752 11 113445555555555443 1 22222111 0 12
Q ss_pred CCHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-C
Q 029526 65 TDVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-V 140 (192)
Q Consensus 65 T~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i 140 (192)
-++++|.+|+++ -+++++-- + -|.-|++-+++|++.+ ++|++. |.+=...++++++++.| +
T Consensus 226 ~~~~~a~~~~~~l~~~~i~~iE~----------P-~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~~~ 290 (407)
T 2o56_A 226 TDTTSAIQFGRMIEELGIFYYEE----------P-VMPLNPAQMKQVADKV---NIPLAA-GERIYWRWGYRPFLENGSL 290 (407)
T ss_dssp SCHHHHHHHHHHHGGGCCSCEEC----------S-SCSSSHHHHHHHHHHC---CSCEEE-CTTCCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEeC----------C-CChhhHHHHHHHHHhC---CCCEEe-CCCcCCHHHHHHHHHcCCC
Confidence 368889888654 57776641 1 2445899999999988 699887 45555678999999887 5
Q ss_pred eEeecch
Q 029526 141 RKFNVNT 147 (192)
Q Consensus 141 ~KINi~T 147 (192)
.=||+..
T Consensus 291 d~v~ik~ 297 (407)
T 2o56_A 291 SVIQPDI 297 (407)
T ss_dssp SEECCCT
T ss_pred CEEecCc
Confidence 6666643
No 168
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.80 E-value=6.4 Score=32.81 Aligned_cols=82 Identities=9% Similarity=0.098 Sum_probs=53.9
Q ss_pred CHHHHHHH---hhhhCCcEEEEecCc-----CC--------------CCCCCCCCC---CCHHHHHHHHhhhccCCccEE
Q 029526 66 DVNQAEEF---IDETDIDALAVCIGN-----VH--------------GKYPSSGPN---LKLDLLKDLHALSSKKGVLLV 120 (192)
Q Consensus 66 ~peea~~F---v~~TgvD~LAvaiGt-----~H--------------G~y~~~~p~---ld~~~L~~I~~~~~~~~iPLV 120 (192)
++++..+| +++.|+|.+.++-.+ .+ |.|.+ +. ..++.++++++.+. .++|++
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg--~~~~~~~~~~i~~v~~~~~-~~ipvi 246 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG--AYIKPTALANVRAFYTRLK-PEIQII 246 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES--GGGHHHHHHHHHHHHTTSC-TTSEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc--ccccHHHHHHHHHHHHhcC-CCCCEE
Confidence 45555443 556799999876443 11 22322 21 24566777777662 149999
Q ss_pred eecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 121 LHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 121 lHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
.=||-.. .++..+++..|..=|-++|.+..
T Consensus 247 ~~GGI~~-~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 247 GTGGIET-GQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EESSCCS-HHHHHHHHHHTCSEEEECHHHHH
T ss_pred EECCCCC-HHHHHHHHHcCCCEEEEchHHHh
Confidence 8886554 45688888999999999999864
No 169
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=90.78 E-value=3.7 Score=37.23 Aligned_cols=85 Identities=11% Similarity=0.020 Sum_probs=59.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecC-cCCCCCC--CCCCCCCHHHHHHHHhhhccC------CccEEeecCCCCCHHHHHH
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIG-NVHGKYP--SSGPNLKLDLLKDLHALSSKK------GVLLVLHGASGLSAELIKG 134 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiG-t~HG~y~--~~~p~ld~~~L~~I~~~~~~~------~iPLVlHGgSG~~~e~~~~ 134 (192)
..++++|+. +.+.|+|++-|.+| +.|.... .+...-.+..|.++.+.++.. ++|+..=||-..|.| +.+
T Consensus 292 V~t~~~a~~-l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~d-i~k 369 (503)
T 1me8_A 292 IVDGEGFRY-LADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYH-MTL 369 (503)
T ss_dssp ECSHHHHHH-HHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHH-HHH
T ss_pred ccCHHHHHH-HHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHH-HHH
Confidence 467778877 45789999998652 2222111 111112567777777665433 599999999887765 999
Q ss_pred HHhcCCeEeecchHHH
Q 029526 135 CIERGVRKFNVNTEVR 150 (192)
Q Consensus 135 ~i~~Gi~KINi~T~l~ 150 (192)
|+.+|..=+-++|.+.
T Consensus 370 AlalGA~~V~iG~~~~ 385 (503)
T 1me8_A 370 ALAMGADFIMLGRYFA 385 (503)
T ss_dssp HHHTTCSEEEESHHHH
T ss_pred HHHcCCCEEEECchhh
Confidence 9999999999999884
No 170
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=90.77 E-value=1.6 Score=37.80 Aligned_cols=109 Identities=9% Similarity=0.109 Sum_probs=69.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++.+.||+.|-+-..+ ++++.++..+.|.+..- -++.+=.+ .+ ..+ ++++|.+|+++ .|
T Consensus 155 ~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g-~d~~l~vD------an---------~~~-~~~~a~~~~~~l~~~~ 216 (379)
T 2rdx_A 155 RHRAAGYRQFQIKVGA-DWQSDIDRIRACLPLLE-PGEKAMAD------AN---------QGW-RVDNAIRLARATRDLD 216 (379)
T ss_dssp HHHHTTCCEEEEECCS-CHHHHHHHHHHHGGGSC-TTCEEEEE------CT---------TCS-CHHHHHHHHHHTTTSC
T ss_pred HHHHcCCCEEEEeccC-CHHHHHHHHHHHHHhcC-CCCEEEEE------CC---------CCC-CHHHHHHHHHHHHhCC
Confidence 5678899999998776 45555544444433221 12332111 01 123 58899998765 46
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
+ ++- .+ -| |++.+++|++.+ ++|++.=+ +=.+.++++++++.| +.=||+.
T Consensus 217 i-~iE----------~P-~~--~~~~~~~l~~~~---~iPI~~de-~i~~~~~~~~~i~~~~~d~v~ik 267 (379)
T 2rdx_A 217 Y-ILE----------QP-CR--SYEECQQVRRVA---DQPMKLDE-CVTGLHMAQRIVADRGAEICCLK 267 (379)
T ss_dssp C-EEE----------CC-SS--SHHHHHHHHTTC---CSCEEECT-TCCSHHHHHHHHHHTCCSEEEEE
T ss_pred e-EEe----------CC-cC--CHHHHHHHHhhC---CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEe
Confidence 6 552 11 23 999999999887 69988755 557778999999887 5566763
No 171
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=90.42 E-value=3.6 Score=34.98 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=56.7
Q ss_pred CCHHHHHHHhhhhCCcEEEE-e--cCcCCCCCCCCCCCCCHHHHHHHHh-hhccCC-ccEEeecCCCCCHHHHHHHHhcC
Q 029526 65 TDVNQAEEFIDETDIDALAV-C--IGNVHGKYPSSGPNLKLDLLKDLHA-LSSKKG-VLLVLHGASGLSAELIKGCIERG 139 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAv-a--iGt~HG~y~~~~p~ld~~~L~~I~~-~~~~~~-iPLVlHGgSG~~~e~~~~~i~~G 139 (192)
.||+.|++ +++-|+|++=+ + |||-- .-.+++.|+.|.+ .. + +|++.=||-+.|.+ ..++.++|
T Consensus 133 ~D~~~ak~-l~~~G~~aVmPlg~pIGsG~-------Gi~~~~~L~~i~~~~~---~~vPVI~~GGI~tpsD-Aa~AmeLG 200 (268)
T 2htm_A 133 PDLVLAKR-LAALGTATVMPLAAPIGSGW-------GVRTRALLELFAREKA---SLPPVVVDAGLGLPSH-AAEVMELG 200 (268)
T ss_dssp SCHHHHHH-HHHHTCSCBEEBSSSTTTCC-------CSTTHHHHHHHHHTTT---TSSCBEEESCCCSHHH-HHHHHHTT
T ss_pred CCHHHHHH-HHhcCCCEEEecCccCcCCc-------ccCCHHHHHHHHHhcC---CCCeEEEeCCCCCHHH-HHHHHHcC
Confidence 48877777 44689999844 1 66622 2235788999988 44 6 99999998887755 99999999
Q ss_pred CeEeecchHHH
Q 029526 140 VRKFNVNTEVR 150 (192)
Q Consensus 140 i~KINi~T~l~ 150 (192)
..-|=++|.+.
T Consensus 201 AdgVlVgSAI~ 211 (268)
T 2htm_A 201 LDAVLVNTAIA 211 (268)
T ss_dssp CCEEEESHHHH
T ss_pred CCEEEEChHHh
Confidence 99999999774
No 172
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=90.38 E-value=0.66 Score=39.24 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=59.7
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcC----------CCC-----------CCCCC-------CCCCHHHHHHHHhhhccCC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNV----------HGK-----------YPSSG-------PNLKLDLLKDLHALSSKKG 116 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~----------HG~-----------y~~~~-------p~ld~~~L~~I~~~~~~~~ 116 (192)
++++++.+-+ +.|+|++++. |-. |+. +.... ...+++.++++++.+ +
T Consensus 133 ~~~~e~~~a~-~~Gad~V~~~-G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~---~ 207 (305)
T 2nv1_A 133 RDLGEATRRI-AEGASMLRTK-GEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG---K 207 (305)
T ss_dssp SSHHHHHHHH-HTTCSEEEEC-CCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT---S
T ss_pred CCHHHHHHHH-HCCCCEEEec-cccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc---C
Confidence 5788888866 7899999985 421 110 11000 235788899998876 6
Q ss_pred ccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHH
Q 029526 117 VLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 117 iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+|+++=+..|+ +.+++.++...|..=|-++|.+.
T Consensus 208 iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~ 242 (305)
T 2nv1_A 208 LPVVNFAAGGVATPADAALMMQLGADGVFVGSGIF 242 (305)
T ss_dssp CSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGG
T ss_pred CCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 99986677788 78899999999999999999875
No 173
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=90.33 E-value=7.6 Score=32.94 Aligned_cols=120 Identities=15% Similarity=0.148 Sum_probs=78.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.+-+...+ +.++.++..+.|-+. .-++.+ .| ..+ ..| ++++|.+|+++ .+
T Consensus 149 ~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~--g~~~~l-----~v-Dan---------~~~-~~~~a~~~~~~l~~~~ 209 (345)
T 2zad_A 149 KIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKV--TRGAKY-----IV-DAN---------MGY-TQKEAVEFARAVYQKG 209 (345)
T ss_dssp HHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH--STTCEE-----EE-ECT---------TCS-CHHHHHHHHHHHHHTT
T ss_pred HHHHcCcCEEEEeecC-CHHHHHHHHHHHHhh--CCCCeE-----EE-ECC---------CCC-CHHHHHHHHHHHHhcC
Confidence 4678899999998765 567677666555443 223433 12 111 123 58899888654 57
Q ss_pred Cc--EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHHHHHH
Q 029526 79 ID--ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRKAYMD 155 (192)
Q Consensus 79 vD--~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~a~~~ 155 (192)
++ ++- .+ -|.-|++-+++|++.+ ++|++.- .|=...++++++++.| +.=||+...- -.+++
T Consensus 210 i~~~~iE----------~P-~~~~~~~~~~~l~~~~---~ipia~d-E~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~ 273 (345)
T 2zad_A 210 IDIAVYE----------QP-VRREDIEGLKFVRFHS---PFPVAAD-ESARTKFDVMRLVKEEAVDYVNIKLMK-SGISD 273 (345)
T ss_dssp CCCSEEE----------CC-SCTTCHHHHHHHHHHS---SSCEEES-TTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHH
T ss_pred CCeeeee----------CC-CCcccHHHHHHHHHhC---CCCEEEe-CCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHH
Confidence 88 553 11 2446899999999887 6998884 4555788899999888 6668885544 44444
Q ss_pred H
Q 029526 156 S 156 (192)
Q Consensus 156 ~ 156 (192)
+
T Consensus 274 ~ 274 (345)
T 2zad_A 274 A 274 (345)
T ss_dssp H
T ss_pred H
Confidence 3
No 174
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=90.20 E-value=2.5 Score=35.17 Aligned_cols=121 Identities=18% Similarity=0.161 Sum_probs=72.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.+.++|.+.|-|=.-..+ + ..++++.+|++|+-+--.| ..-|..+..+.+++ .+|.
T Consensus 104 ~~~~aGAd~itvH~Ea~~---~---~~~~i~~ir~~G~k~Gval----------------np~Tp~e~l~~~l~--~vD~ 159 (246)
T 3inp_A 104 SFAKAGATSIVFHPEASE---H---IDRSLQLIKSFGIQAGLAL----------------NPATGIDCLKYVES--NIDR 159 (246)
T ss_dssp HHHHHTCSEEEECGGGCS---C---HHHHHHHHHTTTSEEEEEE----------------CTTCCSGGGTTTGG--GCSE
T ss_pred HHHHcCCCEEEEccccch---h---HHHHHHHHHHcCCeEEEEe----------------cCCCCHHHHHHHHh--cCCE
Confidence 356777777766433222 2 3466677787776332211 01244455555555 5897
Q ss_pred EEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+. +.+++=.+.+. ...--++.++++++...+ .++|+..=|| +..+.++++++.|..-+=++|.+.
T Consensus 160 Vl--vMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGG--I~~~ti~~~~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 160 VL--IMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGG--VNPYNIAEIAVCGVNAFVAGSAIF 227 (246)
T ss_dssp EE--EECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESS--CCTTTHHHHHTTTCCEEEESHHHH
T ss_pred EE--EeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECC--cCHHHHHHHHHcCCCEEEEehHHh
Confidence 65 44665223220 112235667777776532 3589999995 557889999999999999999875
No 175
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=90.16 E-value=3.7 Score=35.84 Aligned_cols=115 Identities=10% Similarity=-0.020 Sum_probs=73.9
Q ss_pred hhhhcCCCEeEeeCCCC--CH-HHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCC-CHHHHHHHhhh-
Q 029526 2 EAIVLGFDSLMVDGSHL--PF-KDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLT-DVNQAEEFIDE- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l--~~-eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T-~peea~~Fv~~- 76 (192)
++++.||+.|-+.+|.+ ++ ++.++..+.|.+.+-. ++.+=.+. + ..|. ++++|.+|+++
T Consensus 155 ~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~-d~~l~vDa------n---------~~~~~~~~~a~~~~~~l 218 (401)
T 2hzg_A 155 AARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGP-DGDLMVDV------G---------QIFGEDVEAAAARLPTL 218 (401)
T ss_dssp HHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCS-SSEEEEEC------T---------TTTTTCHHHHHTTHHHH
T ss_pred HHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCC-CCeEEEEC------C---------CCCCCCHHHHHHHHHHH
Confidence 56788999999884321 34 6666666666554411 22222111 1 1343 78898888654
Q ss_pred --hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHh-hhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 77 --TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHA-LSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 77 --TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~-~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
-+++++--. -+.-|++-+++|++ .+ ++|++.=+.- .+.++++++++.| +.=||+..
T Consensus 219 ~~~~i~~iEqP-----------~~~~d~~~~~~l~~~~~---~iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~ 278 (401)
T 2hzg_A 219 DAAGVLWLEEP-----------FDAGALAAHAALAGRGA---RVRIAGGEAA-HNFHMAQHLMDYGRIGFIQIDC 278 (401)
T ss_dssp HHTTCSEEECC-----------SCTTCHHHHHHHHTTCC---SSEEEECTTC-SSHHHHHHHHHHSCCSEEEECH
T ss_pred HhcCCCEEECC-----------CCccCHHHHHHHHhhCC---CCCEEecCCc-CCHHHHHHHHHCCCCCEEEeCc
Confidence 588887411 13358999999998 76 6998875554 5678899999877 66677753
No 176
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=90.15 E-value=4.4 Score=35.88 Aligned_cols=112 Identities=9% Similarity=0.117 Sum_probs=73.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++.+.||+.|-+...+ ++++.++..+.|.+..-. ++.+=.+ .+ ..| ++++|.+|+++ -+
T Consensus 195 ~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~avG~-d~~l~vD------an---------~~~-~~~eai~~~~~L~~~~ 256 (428)
T 3bjs_A 195 EYIARGYKALKLRIGD-AARVDIERVRHVRKVLGD-EVDILTD------AN---------TAY-TMADARRVLPVLAEIQ 256 (428)
T ss_dssp HHHHHTCSEEEEECCS-CHHHHHHHHHHHHHHHCT-TSEEEEE------CT---------TCC-CHHHHHHHHHHHHHTT
T ss_pred HHHHCCCCEEEECCCC-CHHHHHHHHHHHHHhcCC-CCEEEEE------CC---------CCC-CHHHHHHHHHHHHhcC
Confidence 5678899999998776 677777776666554421 2332111 01 123 58899888654 58
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCC-ccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKG-VLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~-iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
++++-= + -|.-|++-+++|++.+ + +|++.-+ |=.+.++++++++.| +.=||+.
T Consensus 257 i~~iEq----------P-~~~~d~~~~~~l~~~~---~~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 257 AGWLEE----------P-FACNDFASYREVAKIT---PLVPIAAGE-NHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp CSCEEC----------C-SCTTCHHHHHHHTTTC---SSSCEEECT-TCCSHHHHHHHHTTCCEEEECCB
T ss_pred CCEEEC----------C-CCccCHHHHHHHHHhC---CCCcEEcCC-CcCCHHHHHHHHHhCCCCEEEeC
Confidence 887641 1 1334888899998877 6 9988755 445688999999887 4556664
No 177
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=90.12 E-value=7.2 Score=34.13 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=77.3
Q ss_pred hhhhcCCCEeEeeCCCC------CHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHh
Q 029526 2 EAIVLGFDSLMVDGSHL------PFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFI 74 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l------~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv 74 (192)
++++.||+.+=+.-... ++++.++..+.|-+..- ...+.|.+ + ..+ ++++|.+|+
T Consensus 150 ~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDa--------N---------~~~-~~~~A~~~~ 211 (393)
T 4dwd_A 150 RVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDA--------N---------NGY-SVGGAIRVG 211 (393)
T ss_dssp HHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEEC--------T---------TCC-CHHHHHHHH
T ss_pred HHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEEC--------C---------CCC-CHHHHHHHH
Confidence 34677999988876543 67888887777665442 22222211 1 123 478888886
Q ss_pred h---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchH
Q 029526 75 D---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTE 148 (192)
Q Consensus 75 ~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~ 148 (192)
+ +.+++++-= + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.|+.=||+...
T Consensus 212 ~~L~~~~i~~iEq---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~~d~v~~k~~ 273 (393)
T 4dwd_A 212 RALEDLGYSWFEE---------P--VQHYHVGAMGEVAQRL---DITVSA-GEQTYTLQALKDLILSGVRMVQPDIV 273 (393)
T ss_dssp HHHHHTTCSEEEC---------C--SCTTCHHHHHHHHHHC---SSEEEB-CTTCCSHHHHHHHHHHTCCEECCCTT
T ss_pred HHHHhhCCCEEEC---------C--CCcccHHHHHHHHhhC---CCCEEe-cCCcCCHHHHHHHHHcCCCEEEeCcc
Confidence 5 468888751 1 1334899999999887 699877 55667788999999988777888543
No 178
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=89.99 E-value=5.3 Score=34.93 Aligned_cols=115 Identities=9% Similarity=-0.024 Sum_probs=77.5
Q ss_pred hhhhcCCCEeEee--CC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh--
Q 029526 2 EAIVLGFDSLMVD--GS-HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE-- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D--~S-~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~-- 76 (192)
++++.||+.+=++ |. ..+.++.++..+.|.+..-+ ++.+=.+ . ...+|++++|.+|+++
T Consensus 167 ~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~-d~~l~vD------a---------N~~~~~~~~A~~~~~~L~ 230 (394)
T 3mkc_A 167 KAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGH-DTDMMVD------Y---------LYRFTDWYEVARLLNSIE 230 (394)
T ss_dssp HHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCS-SSEEEEE------C---------TTCCCCHHHHHHHHHHTG
T ss_pred HHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCC-CCeEEEe------C---------CCCCCCHHHHHHHHHHhh
Confidence 3567899999885 21 14677878777776665421 2332211 0 1246789999999765
Q ss_pred -hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 77 -TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 77 -TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
-|++++--- -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+..
T Consensus 231 ~~~i~~iEeP-----------~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 231 DLELYFAEAT-----------LQHDDLSGHAKLVENT---RSRICG-AEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp GGCCSEEESC-----------SCTTCHHHHHHHHHHC---SSCBEE-CTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred hcCCeEEECC-----------CCchhHHHHHHHHhhC---CCCEEe-CCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 588887421 1334889999999988 699866 56666778899999887 66778753
No 179
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=89.84 E-value=0.18 Score=41.25 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=55.1
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
++|.+..+-+.. ++|.+. ++++|+.+.+. .+..-++.|+++++.++. .++|++.=| |+..+++.++++.|..
T Consensus 122 ~t~~e~~~~~~~-~~D~v~--~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~G--GI~~~~~~~~~~aGad 196 (230)
T 1tqj_A 122 STPLDFLEYVLP-VCDLIL--IMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDG--GLKPNNTWQVLEAGAN 196 (230)
T ss_dssp TCCGGGGTTTGG-GCSEEE--EESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEES--SCCTTTTHHHHHHTCC
T ss_pred CCcHHHHHHHHh-cCCEEE--EEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEEC--CcCHHHHHHHHHcCCC
Confidence 444444433322 789654 78888766531 133457888888887631 259999988 5556999999999999
Q ss_pred EeecchHHHH
Q 029526 142 KFNVNTEVRK 151 (192)
Q Consensus 142 KINi~T~l~~ 151 (192)
=+=++|.+..
T Consensus 197 ~vvvGSai~~ 206 (230)
T 1tqj_A 197 AIVAGSAVFN 206 (230)
T ss_dssp EEEESHHHHT
T ss_pred EEEECHHHHC
Confidence 9999999863
No 180
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.62 E-value=3.8 Score=35.66 Aligned_cols=71 Identities=15% Similarity=0.078 Sum_probs=45.5
Q ss_pred HHHHHHhhhhCCcEEEEecCcCC-CCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecc
Q 029526 68 NQAEEFIDETDIDALAVCIGNVH-GKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~H-G~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
+.++.+. +.|+|++.+. |+.. ..|. .|.++++.++++++.+ ++|+++ |+ ..+.++.+++.+.|+.=|-++
T Consensus 169 e~a~~~~-~agad~i~i~-~~~~~~~~~--~~~~~~~~i~~l~~~~---~~pvi~-gg-i~t~e~a~~~~~~Gad~i~vg 239 (393)
T 2qr6_A 169 EIAPIVI-KAGADLLVIQ-GTLISAEHV--NTGGEALNLKEFIGSL---DVPVIA-GG-VNDYTTALHMMRTGAVGIIVG 239 (393)
T ss_dssp HHHHHHH-HTTCSEEEEE-CSSCCSSCC--CC-----CHHHHHHHC---SSCEEE-EC-CCSHHHHHHHHTTTCSEEEES
T ss_pred HHHHHHH-HCCCCEEEEe-CCccccccC--CCcccHHHHHHHHHhc---CCCEEE-CC-cCCHHHHHHHHHcCCCEEEEC
Confidence 4455544 5799999765 2220 1122 2444666688888877 699999 43 466788999999999988886
Q ss_pred h
Q 029526 147 T 147 (192)
Q Consensus 147 T 147 (192)
+
T Consensus 240 ~ 240 (393)
T 2qr6_A 240 G 240 (393)
T ss_dssp C
T ss_pred C
Confidence 5
No 181
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=89.61 E-value=7.4 Score=31.73 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=55.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
|..+..+.+++.-.+|.+. +.++|=.+.+. ...-.+++++++++..+ ++|+..=| |+..+.++++++.|..-+
T Consensus 125 tp~~~~~~~l~~g~~D~Vl--vmsV~pGf~gq~f~~~~l~ki~~lr~~~~--~~~I~VdG--GI~~~ti~~~~~aGAd~~ 198 (227)
T 1tqx_A 125 TDVQKLVPILDTNLINTVL--VMTVEPGFGGQSFMHDMMGKVSFLRKKYK--NLNIQVDG--GLNIETTEISASHGANII 198 (227)
T ss_dssp SCGGGGHHHHTTTCCSEEE--EESSCTTCSSCCCCGGGHHHHHHHHHHCT--TCEEEEES--SCCHHHHHHHHHHTCCEE
T ss_pred CcHHHHHHHhhcCCcCEEE--EeeeccCCCCcccchHHHHHHHHHHHhcc--CCeEEEEC--CCCHHHHHHHHHcCCCEE
Confidence 3344455555422489875 46666434321 12235777888887764 68999999 677899999999999999
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
=++|.+.
T Consensus 199 V~GsaIf 205 (227)
T 1tqx_A 199 VAGTSIF 205 (227)
T ss_dssp EESHHHH
T ss_pred EEeHHHh
Confidence 9999886
No 182
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=89.48 E-value=4.8 Score=33.56 Aligned_cols=126 Identities=10% Similarity=0.045 Sum_probs=76.9
Q ss_pred hhhhcCCCEeEeeCCC-------CCHHHHHHHHHHHHHHHHhCCCe--EEEecccc-ccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMVDGSH-------LPFKDNISHTKYISFLAHSKGML--VEAELGRL-SGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~-------l~~eeNi~~Tk~vv~~Ah~~gv~--VEaElG~i-~g~e~~~~~~~~~~~~T~peea~ 71 (192)
+-+++|..-|.+.+.. .|.+|-+.+.+.+++.+...|++ |=|=.+.. .|..+... . .-.-.+.|+
T Consensus 101 ~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~--~---~~~ai~ra~ 175 (255)
T 2qiw_A 101 QILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFED--P---MVEAIKRIK 175 (255)
T ss_dssp HHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSS--H---HHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchH--H---HHHHHHHHH
Confidence 4567888888886653 47788888888888888766665 54444432 12111000 0 001124555
Q ss_pred HHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC--CHHHHHHHHhcCCeEeecchH
Q 029526 72 EFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL--SAELIKGCIERGVRKFNVNTE 148 (192)
Q Consensus 72 ~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~--~~e~~~~~i~~Gi~KINi~T~ 148 (192)
.|. +-|+|++-+ +|. | +.+.+++|.+.+ ++|+.+-.+.+. |.-.+.++-++|++.|-++..
T Consensus 176 a~~-eAGAd~i~~-----e~~-----~--~~~~~~~i~~~~---~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 176 LME-QAGARSVYP-----VGL-----S--TAEQVERLVDAV---SVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp HHH-HHTCSEEEE-----CCC-----C--SHHHHHHHHTTC---SSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred HHH-HcCCcEEEE-----cCC-----C--CHHHHHHHHHhC---CCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 544 679999876 221 2 456778887776 588777644332 333345566779999999887
No 183
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=89.11 E-value=6.7 Score=31.51 Aligned_cols=119 Identities=13% Similarity=0.237 Sum_probs=75.9
Q ss_pred hhhhcCCCEeEeeCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGS--HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S--~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
.|.++|.+.|.++.| .+|++| .++.++.|+.+|+.+=.+++... +.++ +.+.+.
T Consensus 77 ~~~~~Gad~Vll~~ser~l~~~e----~~~~~~~a~~~Gl~~iv~v~~~~-------------------e~~~-~~~~~~ 132 (219)
T 2h6r_A 77 AIKDCGCKGTLINHSEKRMLLAD----IEAVINKCKNLGLETIVCTNNIN-------------------TSKA-VAALSP 132 (219)
T ss_dssp HHHHHTCCEEEESBTTBCCBHHH----HHHHHHHHHHHTCEEEEEESSSH-------------------HHHH-HTTTCC
T ss_pred HHHHcCCCEEEECCccccCCHHH----HHHHHHHHHHCCCeEEEEeCCch-------------------HHHH-HHhCCC
Confidence 467899999999988 699988 68899999999998888876531 1111 233466
Q ss_pred cEEEEecCcCC--CC--CCCCCCC-CCHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHH
Q 029526 80 DALAVCIGNVH--GK--YPSSGPN-LKLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 80 D~LAvaiGt~H--G~--y~~~~p~-ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+.+++---+.- |. -.. .|. ++ ..++.|++... ++|++. | +|+ ++++.+.+.+.|+.=+=|++.+.
T Consensus 133 ~~i~~~~~~~iGtG~~~~t~-~~~~~~-~~~~~ir~~~~--~~~ii~-g-gGI~~~~~~~~~~~~gaDgvlVGsAi~ 203 (219)
T 2h6r_A 133 DCIAVEPPELIGTGIPVSKA-NPEVVE-GTVRAVKEINK--DVKVLC-G-AGISKGEDVKAALDLGAEGVLLASGVV 203 (219)
T ss_dssp SEEEECCCC---------------CSH-HHHHHHHHHCT--TCEEEE-C-SSCCSHHHHHHHHTTTCCCEEESHHHH
T ss_pred CEEEEEeccccccCCCCccC-CHHHHH-HHHHHHHhccC--CCeEEE-E-eCcCcHHHHHHHhhCCCCEEEEcHHHh
Confidence 77766322221 20 001 122 22 33445555432 477664 3 355 47889999999999998998875
No 184
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=89.07 E-value=9.4 Score=32.67 Aligned_cols=126 Identities=15% Similarity=0.228 Sum_probs=75.4
Q ss_pred hhcCCCEeEeeCCCC-----CHHHHHHHH-------HHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 4 IVLGFDSLMVDGSHL-----PFKDNISHT-------KYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 4 i~~GFtSVM~D~S~l-----~~eeNi~~T-------k~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
.++||+-| +-=|.. .|.+|++.+ -++++.||+.|... + .+-.+|+||+
T Consensus 118 k~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~T------i-------------~~v~~~eeA~ 177 (286)
T 2p10_A 118 KEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLT------T-------------PYVFSPEDAV 177 (286)
T ss_dssp HHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEE------C-------------CEECSHHHHH
T ss_pred HHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeE------E-------------EecCCHHHHH
Confidence 46788877 554422 255555443 36677788665321 1 1447899999
Q ss_pred HHhhhhCCcEEEEecCcCCCCCCCCCCCC---C-HHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHhc--CCeEe
Q 029526 72 EFIDETDIDALAVCIGNVHGKYPSSGPNL---K-LDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIER--GVRKF 143 (192)
Q Consensus 72 ~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l---d-~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~~--Gi~KI 143 (192)
... +-|.|.+++-.|..-|.--+....+ + .+++++|.+.+++ .++.+..|||-=...||+++++++ |+.=+
T Consensus 178 amA-~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 178 AMA-KAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHH-HHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEE
T ss_pred HHH-HcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEE
Confidence 865 8899999999994333222111112 2 4566666666543 246555566533357889999998 88776
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
=..+.+-
T Consensus 257 ~gASsie 263 (286)
T 2p10_A 257 YGASSME 263 (286)
T ss_dssp EESHHHH
T ss_pred Eeehhhh
Confidence 6666554
No 185
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=88.99 E-value=0.7 Score=39.64 Aligned_cols=119 Identities=13% Similarity=0.213 Sum_probs=74.2
Q ss_pred ccCCCHHHHHHHhh--------------hhCCcEEEEecCcCCCCCCCCCC----CCCHHHHHHHHhhhccC----CccE
Q 029526 62 AKLTDVNQAEEFID--------------ETDIDALAVCIGNVHGKYPSSGP----NLKLDLLKDLHALSSKK----GVLL 119 (192)
Q Consensus 62 ~~~T~peea~~Fv~--------------~TgvD~LAvaiGt~HG~y~~~~p----~ld~~~L~~I~~~~~~~----~iPL 119 (192)
.+|.+|+...++++ +.|+|.+-+. ...+.+-+ | ++=+..+++|-+.++.. ++|+
T Consensus 170 ~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~i~i~--d~~~~~ls--p~~f~ef~~p~~k~i~~~i~~~~~~~~~~i 245 (354)
T 3cyv_A 170 MMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIF--DTWGGVLT--GRDYQQFSLYYMHKIVDGLLRENDGRRVPV 245 (354)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE--CTTGGGSC--HHHHHHHTHHHHHHHHHHSCSEETTEECCE
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe--CCccccCC--HHHHHHHhHHHHHHHHHHHHHhcCCCCCCE
Confidence 47899998876665 4799977654 22222211 2 23334456676666433 4896
Q ss_pred EeecCCCCCHHHHHHHHhcCCeEeecch--HHHHHHHHHhcC-----CCCChHHHHHHHHHHHHHHHHHHHHHhCC
Q 029526 120 VLHGASGLSAELIKGCIERGVRKFNVNT--EVRKAYMDSLSR-----PKSDLIHLMASAKEAMKAVVAEKMRLFGS 188 (192)
Q Consensus 120 VlHGgSG~~~e~~~~~i~~Gi~KINi~T--~l~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~i~~~gs 188 (192)
+.|.+ |. ...+....++|+.-+|++. ++..+ .+.+.. .+.|+. ++....+.+++.+++.|+.||.
T Consensus 246 i~~~~-g~-~~~l~~l~~~g~d~i~~d~~~dl~~~-~~~~g~~~~l~Gn~dp~-~l~~t~e~i~~~v~~~l~~~g~ 317 (354)
T 3cyv_A 246 TLFTK-GG-GQWLEAMAETGCDALGLDWTTDIADA-RRRVGNKVALQGNMDPS-MLYAPPARIEEEVATILAGFGH 317 (354)
T ss_dssp EEECT-TT-TTTHHHHHTTSCSEEECCTTSCHHHH-HHHHTTTSEEECCBCGG-GGGSCHHHHHHHHHHHHTTTTT
T ss_pred EEECC-CH-HHHHHHHHhcCCCEEEeCCCCCHHHH-HHHhCCCeEEEecCChH-HhCCCHHHHHHHHHHHHHHhCC
Confidence 66643 54 5567778899999999973 34333 222321 234663 3455678999999999998875
No 186
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=88.88 E-value=1.6 Score=38.11 Aligned_cols=111 Identities=17% Similarity=0.184 Sum_probs=68.4
Q ss_pred hhhhcCCCEeEeeCCCC--------CHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHL--------PFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEE 72 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l--------~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~ 72 (192)
++++.||+.+-+...+- ..++.++..+++.+.+- ...+.|.+ + ..| ++++|.+
T Consensus 158 ~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDa--------n---------~~~-~~~~ai~ 219 (392)
T 3p3b_A 158 QGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDA--------N---------NAY-NLNLTKE 219 (392)
T ss_dssp HHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEEC--------T---------TCC-CHHHHHH
T ss_pred HHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEEC--------C---------CCC-CHHHHHH
Confidence 46788999999876542 23444444444433331 11122211 0 123 6899999
Q ss_pred Hhhhh---CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhh-----hccCCccEEeecCCCCCHHHHHHHHhcC-CeEe
Q 029526 73 FIDET---DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHAL-----SSKKGVLLVLHGASGLSAELIKGCIERG-VRKF 143 (192)
Q Consensus 73 Fv~~T---gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~-----~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KI 143 (192)
|+++. +++++-- + -| -|++-+++|++. + ++|++.-+ - ...++++++++.| +.=|
T Consensus 220 ~~~~l~~~~i~~iE~----------P-~~-~d~~~~~~l~~~l~~~g~---~iPIa~dE-~-~~~~~~~~~i~~~~~d~v 282 (392)
T 3p3b_A 220 VLAALSDVNLYWLEE----------A-FH-EDEALYEDLKEWLGQRGQ---NVLIADGE-G-LASPHLIEWATRGRVDVL 282 (392)
T ss_dssp HHHHTTTSCEEEEEC----------S-SS-CCHHHHHHHHHHHHHHTC---CCEEEECC-S-SCCTTHHHHHHTTSCCEE
T ss_pred HHHHHHhcCCCEEec----------C-Cc-ccHHHHHHHHHhhccCCC---CccEEecC-C-CCHHHHHHHHHcCCCCEE
Confidence 97663 5665431 1 24 589999999987 6 69999887 3 4456799999888 5556
Q ss_pred ecch
Q 029526 144 NVNT 147 (192)
Q Consensus 144 Ni~T 147 (192)
|+..
T Consensus 283 ~ik~ 286 (392)
T 3p3b_A 283 QYDI 286 (392)
T ss_dssp CCBT
T ss_pred EeCc
Confidence 6643
No 187
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.80 E-value=2 Score=34.69 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=71.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.|+++|-+-|+.-.. ..++.+.|+.+|+.+ +.| . .+|+|+.+ ..+.|+|.
T Consensus 83 ~A~~aGAd~v~~p~~----------d~~v~~~~~~~g~~~------i~G------------~-~t~~e~~~-A~~~Gad~ 132 (214)
T 1wbh_A 83 EVTEAGAQFAISPGL----------TEPLLKAATEGTIPL------IPG------------I-STVSELML-GMDYGLKE 132 (214)
T ss_dssp HHHHHTCSCEEESSC----------CHHHHHHHHHSSSCE------EEE------------E-SSHHHHHH-HHHTTCCE
T ss_pred HHHHcCCCEEEcCCC----------CHHHHHHHHHhCCCE------EEe------------c-CCHHHHHH-HHHCCCCE
Confidence 467777777764432 246778888777432 211 2 34888877 55789999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc-CCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER-GVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~-Gi~KINi~T~l~ 150 (192)
+.+ |+. .+..-++.|++|+..+. ++|+|-=| |+..+++...++. |+.=+= +|.+.
T Consensus 133 v~~--------Fpa-~~~gG~~~lk~i~~~~~--~ipvvaiG--GI~~~n~~~~l~agg~~~v~-gS~i~ 188 (214)
T 1wbh_A 133 FKF--------FPA-EANGGVKALQAIAGPFS--QVRFCPTG--GISPANYRDYLALKSVLCIG-GSWLV 188 (214)
T ss_dssp EEE--------TTT-TTTTHHHHHHHHHTTCT--TCEEEEBS--SCCTTTHHHHHTSTTBSCEE-EGGGS
T ss_pred EEE--------ecC-ccccCHHHHHHHhhhCC--CCeEEEEC--CCCHHHHHHHHhcCCCeEEE-ecccc
Confidence 988 443 12223788899988774 59999989 5667899999998 776666 67664
No 188
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=88.78 E-value=1.9 Score=35.33 Aligned_cols=122 Identities=17% Similarity=0.152 Sum_probs=77.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.+.++|.+.|-|=.-.. . ....++++.+|++|+.+-..| . .-|..+..+.+++ ++|.
T Consensus 75 ~~~~aGAd~itvh~Ea~----~-~~~~~~i~~i~~~G~k~gv~l-n---------------p~tp~~~~~~~l~--~~D~ 131 (231)
T 3ctl_A 75 QLARAGADFITLHPETI----N-GQAFRLIDEIRRHDMKVGLIL-N---------------PETPVEAMKYYIH--KADK 131 (231)
T ss_dssp HHHHHTCSEEEECGGGC----T-TTHHHHHHHHHHTTCEEEEEE-C---------------TTCCGGGGTTTGG--GCSE
T ss_pred HHHHcCCCEEEECcccC----C-ccHHHHHHHHHHcCCeEEEEE-E---------------CCCcHHHHHHHHh--cCCE
Confidence 46778887776532210 1 123578888998887544333 0 1133333444443 6897
Q ss_pred EEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHhcCCeEeecc-hHHH
Q 029526 82 LAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIERGVRKFNVN-TEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~-T~l~ 150 (192)
+-+ -|+|..+.+. -..--++.++++++..+. .++|+..=| |+..+.+.++++.|..=+=++ |.+.
T Consensus 132 Vlv--msV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdG--GI~~~~~~~~~~aGAd~~V~G~saif 200 (231)
T 3ctl_A 132 ITV--MTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDG--SCNQATYEKLMAAGADVFIVGTSGLF 200 (231)
T ss_dssp EEE--ESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEES--CCSTTTHHHHHHHTCCEEEECTTTTG
T ss_pred EEE--eeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEEC--CcCHHHHHHHHHcCCCEEEEccHHHh
Confidence 765 5666555421 122346777777777632 358999988 677889999999999999999 8875
No 189
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=88.68 E-value=11 Score=32.44 Aligned_cols=123 Identities=9% Similarity=0.040 Sum_probs=79.7
Q ss_pred hhhhc-CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVL-GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~-GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++++. ||+.+=+.-..-|.++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|+++ .
T Consensus 149 ~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~-~~~l~vD------an---------~~~-~~~~a~~~~~~l~~~ 211 (367)
T 3dg3_A 149 RIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGD-AIELYVD------GN---------RGW-SAAESLRAMREMADL 211 (367)
T ss_dssp HHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGG-GSEEEEE------CT---------TCS-CHHHHHHHHHHTTTS
T ss_pred HHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCC-CCEEEEE------CC---------CCC-CHHHHHHHHHHHHHh
Confidence 34566 999998887665655777777776665421 2222111 01 123 57899988765 4
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHHHHHHH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRKAYMDS 156 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~a~~~~ 156 (192)
+++++- -+ -|.-|++-+++|++.+ ++|++.- .|=.+.++++++++.| +.=||+..... .++.+
T Consensus 212 ~i~~iE---------qP--~~~~d~~~~~~l~~~~---~iPIa~d-E~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~ 275 (367)
T 3dg3_A 212 DLLFAE---------EL--CPADDVLSRRRLVGQL---DMPFIAD-ESVPTPADVTREVLGGSATAISIKTART-GFTGS 275 (367)
T ss_dssp CCSCEE---------SC--SCTTSHHHHHHHHHHC---SSCEEEC-TTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHH
T ss_pred CCCEEE---------CC--CCcccHHHHHHHHHhC---CCCEEec-CCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHH
Confidence 677664 11 1334788899999887 6998875 4556778899999887 77788876544 44444
Q ss_pred h
Q 029526 157 L 157 (192)
Q Consensus 157 ~ 157 (192)
+
T Consensus 276 ~ 276 (367)
T 3dg3_A 276 T 276 (367)
T ss_dssp H
T ss_pred H
Confidence 3
No 190
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=88.63 E-value=2.4 Score=33.99 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=32.0
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCc-cEEeecC
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGV-LLVLHGA 124 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~i-PLVlHGg 124 (192)
+++++.+++.+.|.|.+-+-..+-|. |. .+.++.+.++++++..+..++ ++++|+.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~gl~~~~~h~~ 71 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRS-WR--PRALSPAEVEAFRALREASGGLPAVIHAS 71 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTC-CS--CCCCCHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCc-Cc--CCCCCHHHHHHHHHHHHHcCCceEEEecC
Confidence 35667777777777777664333332 22 134445556666665555566 6777764
No 191
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=88.51 E-value=7.4 Score=33.62 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=80.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
++.+.||+.+=+--...|+++.++..+++.+....-++.+=.+ . ...| ++++|.+|.++.. +
T Consensus 160 ~~~~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~g~~~~l~vD--------------a-N~~~-~~~~A~~~~~~l~-~- 221 (376)
T 4h2h_A 160 EKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVRGTGIALAAD--------------G-NRGW-TTRDALRFSRECP-D- 221 (376)
T ss_dssp HHHHHTCSEEEEECCSSCHHHHHHHHHHHHHHHTTSCCEEEEE--------------C-TTCC-CHHHHHHHHHHCT-T-
T ss_pred HHHhcCceEEEEecCCCCHHHHHHHHHHHHhhccCCeeEEEEe--------------e-ccCC-CHHHHHHHHHHHh-h-
Confidence 4567899999999888899999988888776553222222111 0 0123 7899999987652 1
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
.+.|-. .|--+++-++++++.+ ++|+++ |-|-...++++++++.| +.=+|+.-
T Consensus 222 --------~~~~iE-eP~~~~~~~~~l~~~~---~~pia~-dE~~~~~~~~~~~~~~~~~d~v~~d~ 275 (376)
T 4h2h_A 222 --------IPFVME-QPCNSFEDLEAIRPLC---HHALYM-DEDGTSLNTVITAAATSLVDGFGMKV 275 (376)
T ss_dssp --------SCEEEE-SCSSSHHHHHHHGGGC---CSCEEE-STTCCSHHHHHHHHHTTCCSEECCBH
T ss_pred --------cccccc-CCcchhhhHhhhhhcc---cCcccc-CcccCCHHHHHHHHHhhccCcccccc
Confidence 112322 4656788889998887 699887 88888999999999988 55677753
No 192
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=88.51 E-value=1.2 Score=37.01 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=57.4
Q ss_pred CCHHHHHHHhhhhC-------CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh
Q 029526 65 TDVNQAEEFIDETD-------IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE 137 (192)
Q Consensus 65 T~peea~~Fv~~Tg-------vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~ 137 (192)
++|+.++.|.+... |++.+ -|+ .-+++++++|++.+. ++|+.+=||-.. .|+++++.+
T Consensus 146 ~~~e~~~~~a~~g~~~l~~~~Vyl~~--~G~----------~~~~~~i~~i~~~~~--~~Pv~vGgGI~s-~e~a~~~~~ 210 (234)
T 2f6u_A 146 IDKELAASYALVGEKLFNLPIIYIEY--SGT----------YGNPELVAEVKKVLD--KARLFYGGGIDS-REKAREMLR 210 (234)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEC--TTS----------CCCHHHHHHHHHHCS--SSEEEEESCCCS-HHHHHHHHH
T ss_pred CCHHHHHHHHHhhhhhcCCCEEEEeC--CCC----------cchHHHHHHHHHhCC--CCCEEEEecCCC-HHHHHHHHh
Confidence 38888999988763 34333 232 227899999998872 499999886654 467999888
Q ss_pred cCCeEeecchHHHHHHHHHhc
Q 029526 138 RGVRKFNVNTEVRKAYMDSLS 158 (192)
Q Consensus 138 ~Gi~KINi~T~l~~a~~~~~~ 158 (192)
|..+|-++|.+-....++++
T Consensus 211 -gAd~VIVGSa~v~~~~~~~~ 230 (234)
T 2f6u_A 211 -YADTIIVGNVIYEKGIDAFL 230 (234)
T ss_dssp -HSSEEEECHHHHHHCHHHHH
T ss_pred -CCCEEEEChHHHhCHHHHHH
Confidence 99999999998766555554
No 193
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=88.41 E-value=12 Score=32.53 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=79.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.+=+.-...++++.++..+.|.+.. -++.+=.+. + ..+ ++++|.+|+++ -+
T Consensus 158 ~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~--~~~~l~vDa------n---------~~~-~~~~A~~~~~~L~~~~ 219 (385)
T 3i6e_A 158 RLRADGVGLIKLKTGFRDHAFDIMRLELIARDF--PEFRVRVDY------N---------QGL-EIDEAVPRVLDVAQFQ 219 (385)
T ss_dssp HHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC--TTSEEEEEC------T---------TCC-CGGGHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC--CCCeEEEEC------C---------CCC-CHHHHHHHHHHHHhcC
Confidence 356779999999887778888888888877665 243333221 1 123 46788887654 57
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
++++- -+ -|.-|++-+++|++.+ ++|++.- .|=.+.++++++++.| +.=||+....
T Consensus 220 i~~iE---------qP--~~~~d~~~~~~l~~~~---~iPIa~d-E~~~~~~~~~~~~~~~~~d~v~~k~~~ 276 (385)
T 3i6e_A 220 PDFIE---------QP--VRAHHFELMARLRGLT---DVPLLAD-ESVYGPEDMVRAAHEGICDGVSIKIMK 276 (385)
T ss_dssp CSCEE---------CC--SCTTCHHHHHHHHTTC---SSCEEES-TTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCEEE---------CC--CCcccHHHHHHHHHhC---CCCEEEe-CCcCCHHHHHHHHHcCCCCEEEecccc
Confidence 77764 11 2345789999999887 6998875 5667788899999877 5667876443
No 194
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=88.40 E-value=9 Score=33.46 Aligned_cols=112 Identities=11% Similarity=0.133 Sum_probs=75.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHH-hCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAH-SKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ET 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah-~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~T 77 (192)
++++.||+.+=+.... +.++.++..+.|.+..- ...+.|.+ + ..+ ++++|.+|++ +.
T Consensus 165 ~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a~g~~~~l~vDa--------N---------~~~-~~~~A~~~~~~L~~~ 225 (392)
T 3ddm_A 165 RKAAEGYRAFKLKVGF-DDARDVRNALHVRELLGAATPLMADA--------N---------QGW-DLPRARQMAQRLGPA 225 (392)
T ss_dssp HHHHHTCCCEEEECSS-CHHHHHHHHHHHHHHHCSSSCEEEEC--------T---------TCC-CHHHHHHHHHHHGGG
T ss_pred HHHHcCCCEEEEecCC-CHHHHHHHHHHHHHhcCCCceEEEeC--------C---------CCC-CHHHHHHHHHHHHHh
Confidence 4567899999888665 67777777666655432 11222221 1 123 5889988855 46
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+++++-= + -|.-| ++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+..
T Consensus 226 ~i~~iEe---------P--~~~~d~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~v~~k~ 282 (392)
T 3ddm_A 226 QLDWLEE---------P--LRADRPAAEWAELAQAA---PMPLAG-GENIAGVAAFETALAARSLRVMQPDL 282 (392)
T ss_dssp CCSEEEC---------C--SCTTSCHHHHHHHHHHC---SSCEEE-CTTCCSHHHHHHHHHHTCEEEECCCT
T ss_pred CCCEEEC---------C--CCccchHHHHHHHHHhc---CCCEEe-CCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 8888751 1 23346 88999999887 699887 56667888999999877 66777754
No 195
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=88.24 E-value=5.2 Score=34.17 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=59.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCC-------------------------C------CCCCCHHHHHHHHhhh
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPS-------------------------S------GPNLKLDLLKDLHALS 112 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~-------------------------~------~p~ld~~~L~~I~~~~ 112 (192)
-++++|+++-+ +.|+|++.+. |. . |.+ + ....+++++++|.+.+
T Consensus 132 v~~~~Ea~~a~-~~Gad~I~v~-g~-~--gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~ 206 (297)
T 4adt_A 132 CTNLGEALRRI-SEGASMIRTK-GE-A--GTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK 206 (297)
T ss_dssp ESSHHHHHHHH-HHTCSEEEEC-CC-T--TSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT
T ss_pred eCCHHHHHHHH-hCCCCEEEEC-CC-c--CCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhc
Confidence 47888988755 5689987765 21 1 111 0 0145789999999887
Q ss_pred ccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHH
Q 029526 113 SKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 113 ~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
++|+++=..+|+ ..++++++.+.|+.=|=++|.+.
T Consensus 207 ---~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~ 242 (297)
T 4adt_A 207 ---RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIF 242 (297)
T ss_dssp ---SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHH
T ss_pred ---CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHH
Confidence 699887677788 88999999999999999999886
No 196
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=88.12 E-value=14 Score=32.87 Aligned_cols=117 Identities=9% Similarity=0.062 Sum_probs=76.0
Q ss_pred hhhhcCCCEeEeeCC--------CCCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccccccccCCCHHHH
Q 029526 2 EAIVLGFDSLMVDGS--------HLPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQA 70 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S--------~l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea 70 (192)
++++.||+.+=+... ..|..++++...++++..++. ++.+=.+ .+ ..+ ++++|
T Consensus 156 ~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vD---------an------~~~-t~~~A 219 (433)
T 3rcy_A 156 DCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFG---------TH------GQF-TTAGA 219 (433)
T ss_dssp HHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEEC---------CC------SCB-CHHHH
T ss_pred HHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEe---------CC------CCC-CHHHH
Confidence 457789999998743 235445555555555555531 2222211 10 123 58899
Q ss_pred HHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 71 EEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 71 ~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
.+|++ +.+++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+.
T Consensus 220 ~~~~~~Le~~~i~~iEe---------P--~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~g~~D~v~~d 284 (433)
T 3rcy_A 220 IRLGQAIEPYSPLWYEE---------P--VPPDNVGAMAQVARAV---RIPVAT-GERLTTKAEFAPVLREGAAAILQPA 284 (433)
T ss_dssp HHHHHHHGGGCCSEEEC---------C--SCTTCHHHHHHHHHHS---SSCEEE-CTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHhhhcCCCEEEC---------C--CChhhHHHHHHHHhcc---CCCEEe-cCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 88855 458888741 1 1334899999999988 699876 66667888999999887 7777876
Q ss_pred hHH
Q 029526 147 TEV 149 (192)
Q Consensus 147 T~l 149 (192)
-.-
T Consensus 285 ~~~ 287 (433)
T 3rcy_A 285 LGR 287 (433)
T ss_dssp HHH
T ss_pred chh
Confidence 443
No 197
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=88.05 E-value=7 Score=34.12 Aligned_cols=114 Identities=12% Similarity=-0.003 Sum_probs=75.7
Q ss_pred hhhhcCCCEeEee--C-CCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh--
Q 029526 2 EAIVLGFDSLMVD--G-SHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE-- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D--~-S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~-- 76 (192)
++++.||+.+=++ | +..+.++.++..+.|-+..-+ ++.+=.+ . ...+|++++|.+|+++
T Consensus 162 ~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~-d~~l~vD------a---------n~~~~~~~~A~~~~~~L~ 225 (394)
T 3mqt_A 162 KAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGW-DMDMMVD------C---------LYRWTDWQKARWTFRQLE 225 (394)
T ss_dssp HHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCS-SSEEEEE------C---------TTCCSCHHHHHHHHHHTG
T ss_pred HHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCC-CCeEEEE------C---------CCCCCCHHHHHHHHHHHh
Confidence 3567899998885 2 114577777777776655421 2322211 0 1246789999998765
Q ss_pred -hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 77 -TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 77 -TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
.|++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+.
T Consensus 226 ~~~i~~iEe---------P--~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~~k 282 (394)
T 3mqt_A 226 DIDLYFIEA---------C--LQHDDLIGHQKLAAAI---NTRLCG-AEMSTTRFEAQEWLEKTGISVVQSD 282 (394)
T ss_dssp GGCCSEEES---------C--SCTTCHHHHHHHHHHS---SSEEEE-CTTCCHHHHHHHHHHHHCCSEECCC
T ss_pred hcCCeEEEC---------C--CCcccHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHcCCCCeEecC
Confidence 58888741 1 1334899999999988 699876 55666778899999876 6667775
No 198
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=88.02 E-value=1.1 Score=36.72 Aligned_cols=82 Identities=11% Similarity=0.182 Sum_probs=67.8
Q ss_pred ccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhh-ccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 62 AKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALS-SKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 62 ~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~-~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
..+.+.+++.+.+++.|+|+|=+=|+- |.|-++ -.+-.+.+++|++.+ . ++|+..|==.-.|++.++.+.+.|+
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmD--g~Fvpn-~~~G~~~v~~ir~~~~~--~~~~dvhLmv~~p~~~i~~~~~aGa 88 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMD--GHFVPN-ITFGHPVVESLRKQLGQ--DPFFDMHMMVSKPEQWVKPMAVAGA 88 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEB--SSSSSC-BCBCHHHHHHHHHHHCS--SSCEEEEEECSCGGGGHHHHHHHTC
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecC--CCcCcc-cccCHHHHHHHHHhhCC--CCcEEEEEEeCCHHHHHHHHHHcCC
Confidence 357788999999999999999998876 446542 445678899999884 2 5899988888889999999999999
Q ss_pred eEeecchH
Q 029526 141 RKFNVNTE 148 (192)
Q Consensus 141 ~KINi~T~ 148 (192)
.-|.+.-+
T Consensus 89 d~itvH~E 96 (228)
T 3ovp_A 89 NQYTFHLE 96 (228)
T ss_dssp SEEEEEGG
T ss_pred CEEEEccC
Confidence 99999776
No 199
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=87.94 E-value=1.7 Score=36.71 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=54.8
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
..||.+|.+.+.+.|||-+== ||.-+ ...-.+++|+++.+.. + .+.+=-|+|+..+.+.+.+..|+.-+
T Consensus 127 ~~d~~~ale~L~~lG~~rILT-----SG~~~--~a~~g~~~L~~Lv~~a---~-~i~Im~GgGv~~~Ni~~l~~tGv~e~ 195 (256)
T 1twd_A 127 CANPLYTLNNLAELGIARVLT-----SGQKS--DALQGLSKIMELIAHR---D-APIIMAGAGVRAENLHHFLDAGVLEV 195 (256)
T ss_dssp CSCHHHHHHHHHHHTCCEEEE-----CTTSS--STTTTHHHHHHHHTSS---S-CCEEEEESSCCTTTHHHHHHHTCSEE
T ss_pred cCCHHHHHHHHHHcCCCEEEC-----CCCCC--CHHHHHHHHHHHHHhh---C-CcEEEecCCcCHHHHHHHHHcCCCeE
Confidence 579999999999999997652 34322 2455788888887764 3 45555567999999999989999999
Q ss_pred ecc
Q 029526 144 NVN 146 (192)
Q Consensus 144 Ni~ 146 (192)
..+
T Consensus 196 H~S 198 (256)
T 1twd_A 196 HSS 198 (256)
T ss_dssp EEC
T ss_pred eEC
Confidence 965
No 200
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=87.85 E-value=9.3 Score=33.44 Aligned_cols=122 Identities=12% Similarity=0.025 Sum_probs=76.9
Q ss_pred hhhhcCCCEeEeeCCCCC--------HHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHLP--------FKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEF 73 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~--------~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~F 73 (192)
++++.||+.+=+.-...+ +++.++..+.|-+..- ++.+=.+ . +.--++++|.+|
T Consensus 175 ~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~--d~~L~vD------a----------N~~w~~~~A~~~ 236 (393)
T 3u9i_A 175 AIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAP--TARLILD------G----------NCGYTAPDALRL 236 (393)
T ss_dssp HHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHST--TSEEEEE------C----------CSCCCHHHHHHH
T ss_pred HHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCC--CCeEEEE------c----------cCCCCHHHHHHH
Confidence 356789999988876655 6777776666655431 1111110 1 122368999999
Q ss_pred hhhh-----CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 74 IDET-----DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 74 v~~T-----gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+++. ++.++= ..-|.-|++-+++|++.+ ++|+++ |-|=.+..+++++++.| +.=||+.-
T Consensus 237 ~~~L~~~~~~i~~iE-----------eP~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~i~~k~ 301 (393)
T 3u9i_A 237 LDMLGVHGIVPALFE-----------QPVAKDDEEGLRRLTATR---RVPVAA-DESVASATDAARLARNAAVDVLNIKL 301 (393)
T ss_dssp HHTTTTTTCCCSEEE-----------CCSCTTCTTHHHHHHHTC---SSCEEE-STTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHhhCCCCeEEEE-----------CCCCCCcHHHHHHHHhhC---CCcEEe-CCcCCCHHHHHHHHHcCCCCEEEecc
Confidence 8765 333332 101334888899999887 699887 77778889999999876 77788875
Q ss_pred HHHHHHHHHh
Q 029526 148 EVRKAYMDSL 157 (192)
Q Consensus 148 ~l~~a~~~~~ 157 (192)
.. -.++.++
T Consensus 302 ~~-GGit~~~ 310 (393)
T 3u9i_A 302 MK-CGIVEAL 310 (393)
T ss_dssp HH-HCHHHHH
T ss_pred cc-cCHHHHH
Confidence 54 3344433
No 201
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=87.77 E-value=10 Score=32.73 Aligned_cols=115 Identities=13% Similarity=0.079 Sum_probs=77.6
Q ss_pred hhhhcCCCEeEeeCCCC--CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---
Q 029526 2 EAIVLGFDSLMVDGSHL--PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE--- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l--~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~--- 76 (192)
++++.||+.+=+...+. +.++.++..+.|-+..-+ ++.+=.+ . ...+||+++|.+|+++
T Consensus 156 ~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~-~~~l~vD------a---------n~~~~d~~~A~~~~~~l~~ 219 (374)
T 3sjn_A 156 GLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGP-EMEVQID------L---------ASKWHTCGHSAMMAKRLEE 219 (374)
T ss_dssp HHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCS-SSEEEEE------C---------TTTTCSHHHHHHHHHHSGG
T ss_pred HHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCC-CCeEEEE------C---------CCCCCCHHHHHHHHHHhhh
Confidence 46778999999987653 567777777666554321 3333221 0 1246779999998654
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
-|++++-= + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+..
T Consensus 220 ~~i~~iEq---------P--~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 220 FNLNWIEE---------P--VLADSLISYEKLSRQV---SQKIAG-GESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp GCCSEEEC---------S--SCTTCHHHHHHHHHHC---SSEEEE-CTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred cCceEEEC---------C--CCcccHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 57888741 1 1334899999999887 699886 55556788899999765 66677654
No 202
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=87.72 E-value=0.72 Score=38.47 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=52.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEe-cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 65 TDVNQAEEFIDETDIDALAVC-IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAva-iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.||.+..+..++-|.|.|-+. +. + -+++.+++|.+.+ ++|+-+-||-- .+++++.+ .|+.||
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~----------~-~n~~~i~~i~~~~---~~pv~vgGGir--~~~~~~~l-~Ga~~V 100 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLG----------P-NNDDAAREALQES---PQFLQVGGGIN--DTNCLEWL-KWASKV 100 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEES----------S-SCHHHHHHHHHHS---TTTSEEESSCC--TTTHHHHT-TTCSCE
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCC----------C-CCHHHHHHHHhcC---CceEEEeCCCC--HHHHHHHh-cCCCEE
Confidence 479887676777788876652 11 1 3688889998877 69999966554 44999999 999999
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
.++|.+.
T Consensus 101 iigs~a~ 107 (260)
T 2agk_A 101 IVTSWLF 107 (260)
T ss_dssp EECGGGB
T ss_pred EECcHHH
Confidence 9999853
No 203
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=87.66 E-value=12 Score=31.57 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=47.5
Q ss_pred hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHHHHHHH
Q 029526 76 ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVRKAYMD 155 (192)
Q Consensus 76 ~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~a~~~ 155 (192)
+-|.|++-+ || .-+.+.+++|.+.+ ++|+.+-++++.+. +++.-++|++-|=+...+..+.+.
T Consensus 179 eAGAd~i~~-----e~-------~~~~~~~~~i~~~~---~~P~n~~~~~~~~~--~~eL~~lGv~~v~~~~~~~raa~~ 241 (275)
T 2ze3_A 179 DAGADGIFV-----PL-------ALQSQDIRALADAL---RVPLNVMAFPGSPV--PRALLDAGAARVSFGQSLMLATLG 241 (275)
T ss_dssp HTTCSEEEC-----TT-------CCCHHHHHHHHHHC---SSCEEEECCTTSCC--HHHHHHTTCSEEECTTHHHHHHHH
T ss_pred HCCCCEEEE-----CC-------CCCHHHHHHHHHhc---CCCEEEecCCCCCC--HHHHHHcCCcEEEEChHHHHHHHH
Confidence 568888764 21 12567788888877 69987776554332 466677899999999998888877
Q ss_pred Hhc
Q 029526 156 SLS 158 (192)
Q Consensus 156 ~~~ 158 (192)
+++
T Consensus 242 a~~ 244 (275)
T 2ze3_A 242 LVQ 244 (275)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 204
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=87.45 E-value=4.8 Score=34.93 Aligned_cols=114 Identities=10% Similarity=0.025 Sum_probs=71.4
Q ss_pred hhhhcCCCEeEeeCCC---------C----CHHHHHHHHHHHHHHHHh-C--CCeEEEeccccccCCCCCccccccccCC
Q 029526 2 EAIVLGFDSLMVDGSH---------L----PFKDNISHTKYISFLAHS-K--GMLVEAELGRLSGTEDGLTVEDYEAKLT 65 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~---------l----~~eeNi~~Tk~vv~~Ah~-~--gv~VEaElG~i~g~e~~~~~~~~~~~~T 65 (192)
++.+.||+.|=+...+ . +.+.+++...++++..++ . ++.+=.+. + ..|
T Consensus 147 ~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~------n---------~~~- 210 (392)
T 2poz_A 147 RPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDL------S---------GGL- 210 (392)
T ss_dssp HHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC------T---------TCS-
T ss_pred HHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEEC------C---------CCC-
Confidence 5678899999987652 1 123455555555555543 1 22222111 0 123
Q ss_pred CHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++ -+++++-- + -|.-|++-+++|++.+ ++|++.=+ +=.+.++++++++.| +.
T Consensus 211 ~~~~a~~~~~~l~~~~i~~iE~----------P-~~~~~~~~~~~l~~~~---~ipIa~dE-~~~~~~~~~~~i~~~~~d 275 (392)
T 2poz_A 211 TTDETIRFCRKIGELDICFVEE----------P-CDPFDNGALKVISEQI---PLPIAVGE-RVYTRFGFRKIFELQACG 275 (392)
T ss_dssp CHHHHHHHHHHHGGGCEEEEEC----------C-SCTTCHHHHHHHHHHC---SSCEEECT-TCCHHHHHHHHHTTTCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEEC----------C-CCcccHHHHHHHHhhC---CCCEEecC-CcCCHHHHHHHHHcCCCC
Confidence 58899888655 57777641 1 2345899999999887 69988754 445678999999887 55
Q ss_pred Eeecc
Q 029526 142 KFNVN 146 (192)
Q Consensus 142 KINi~ 146 (192)
=||+.
T Consensus 276 ~v~ik 280 (392)
T 2poz_A 276 IIQPD 280 (392)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 56663
No 205
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=87.40 E-value=0.89 Score=39.15 Aligned_cols=118 Identities=10% Similarity=0.099 Sum_probs=72.4
Q ss_pred cCCCHHHHHHHhh--------------hhCCcEEEEecCcCCCCCCCCCC----CCCHHHHHHHHhhhccCCccEEeecC
Q 029526 63 KLTDVNQAEEFID--------------ETDIDALAVCIGNVHGKYPSSGP----NLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 63 ~~T~peea~~Fv~--------------~TgvD~LAvaiGt~HG~y~~~~p----~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
+|.+|+...++++ +.|+|.+-+. ...|.+-+ | ++=+..+++|-+.++..++|+++|.+
T Consensus 177 ~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i~--D~~~~~ls--p~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~ 252 (359)
T 2inf_A 177 MYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIF--DSWVGALN--QADYRTYIKPVMNRIFSELAKENVPLIMFGV 252 (359)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE--CTTGGGSC--HHHHHHHTHHHHHHHHHHHGGGCSCEEEECT
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe--CCccccCC--HHHHHHHhHHHHHHHHHHHHHcCCcEEEEcC
Confidence 6789997666654 4799976654 33333221 2 22234445665555444699999965
Q ss_pred CCCCHHHHHHHHhcCCeEeecchHHHHHHHHHhcC-----CCCChHHHHHHHHHHHHHHHHHHHHHhCC
Q 029526 125 SGLSAELIKGCIERGVRKFNVNTEVRKAYMDSLSR-----PKSDLIHLMASAKEAMKAVVAEKMRLFGS 188 (192)
Q Consensus 125 SG~~~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~i~~~gs 188 (192)
|. ...+....+.|+.-+|+....-..-.+.... .+.|+ .++....+.+++.+++.++. |.
T Consensus 253 -G~-~~~l~~l~~~g~d~~~~d~~~d~~~~~~~g~~~~l~Gnldp-~~l~~t~e~I~~~v~~~l~~-~~ 317 (359)
T 2inf_A 253 -GA-SHLAGDWHDLPLDVVGLDWRLGIDEARSKGITKTVQGNLDP-SILLAPWEVIEQKTKEILDQ-GM 317 (359)
T ss_dssp -TC-GGGHHHHHTSSCSEEECCTTSCHHHHHHTTCCSEEECCBCG-GGGGSCHHHHHHHHHHHHHH-HT
T ss_pred -Cc-HHHHHHHHHhCCCEEEeCCCCCHHHHHHcCCCEEEEecCCh-HHhcCCHHHHHHHHHHHHHh-CC
Confidence 54 5577788899999999974322222222211 23366 34455678888888888887 54
No 206
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=87.25 E-value=2.7 Score=34.98 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=68.6
Q ss_pred cccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 61 EAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 61 ~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
...+.+.++..+.+++.|+|+|=+=|.- |.|-++ -.+-++.++.|++.+. ++||..|==.--|+..++.+++.|.
T Consensus 36 saD~~~L~~~i~~l~~~G~d~lHvDVmD--g~FVpn-it~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~i~~~~~aGA 110 (246)
T 3inp_A 36 SADLARLGDDVKAVLAAGADNIHFDVMD--NHYVPN-LTFGPMVLKALRDYGI--TAGMDVHLMVKPVDALIESFAKAGA 110 (246)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEEB--SSSSSC-BCCCHHHHHHHHHHTC--CSCEEEEEECSSCHHHHHHHHHHTC
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEecC--CCcCcc-hhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHHHHHHHHHcCC
Confidence 3457788999999999999999998876 446432 4456788999998872 4899999999999999999999999
Q ss_pred eEeecchH
Q 029526 141 RKFNVNTE 148 (192)
Q Consensus 141 ~KINi~T~ 148 (192)
.-|.+.-+
T Consensus 111 d~itvH~E 118 (246)
T 3inp_A 111 TSIVFHPE 118 (246)
T ss_dssp SEEEECGG
T ss_pred CEEEEccc
Confidence 99998765
No 207
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=87.16 E-value=1.4 Score=38.05 Aligned_cols=81 Identities=17% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCHHHHHHH---hhhhCCcEEEEecCc----CCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec--CCCCCHHHHHHH
Q 029526 65 TDVNQAEEF---IDETDIDALAVCIGN----VHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG--ASGLSAELIKGC 135 (192)
Q Consensus 65 T~peea~~F---v~~TgvD~LAvaiGt----~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG--gSG~~~e~~~~~ 135 (192)
-++++-.++ +.+.|+|.+-+..|+ +.-.|-. ...-+++++++|++... ++|+++.+ +.+. .+++++|
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~-~~~~~~e~l~~i~~~~~--~~~i~~l~~p~~~~-~~~i~~a 102 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGF-GRHTDLEYIEAVAGEIS--HAQIATLLLPGIGS-VHDLKNA 102 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBC-CSSCHHHHHHHHHTTCS--SSEEEEEECBTTBC-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccC-CCCCHHHHHHHHHhhCC--CCEEEEEecCCccc-HHHHHHH
Confidence 455665554 456899999997332 2212211 12347899999987653 68998885 3343 6789999
Q ss_pred HhcCCeEeecchHH
Q 029526 136 IERGVRKFNVNTEV 149 (192)
Q Consensus 136 i~~Gi~KINi~T~l 149 (192)
.++|+..|.|.+.+
T Consensus 103 ~~aGvd~v~I~~~~ 116 (345)
T 1nvm_A 103 YQAGARVVRVATHC 116 (345)
T ss_dssp HHHTCCEEEEEEET
T ss_pred HhCCcCEEEEEEec
Confidence 99999999998755
No 208
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=87.14 E-value=2 Score=35.49 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=76.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.|+++|-+-|+--+ .+.+++++|+.+|+.+=. | ..+|.|+.+ ..+-|+|.
T Consensus 101 ~Ai~AGA~fIvsP~----------~~~~vi~~~~~~gi~~ip------G-------------v~TptEi~~-A~~~Gad~ 150 (232)
T 4e38_A 101 AAKEAGATFVVSPG----------FNPNTVRACQEIGIDIVP------G-------------VNNPSTVEA-ALEMGLTT 150 (232)
T ss_dssp HHHHHTCSEEECSS----------CCHHHHHHHHHHTCEEEC------E-------------ECSHHHHHH-HHHTTCCE
T ss_pred HHHHcCCCEEEeCC----------CCHHHHHHHHHcCCCEEc------C-------------CCCHHHHHH-HHHcCCCE
Confidence 58889988887543 245788899988765421 1 247888888 45789999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+-+ |+.. +.-.++.|+.|+.... ++|++==|| ++.++++...+.|..=+=++|.+.
T Consensus 151 vK~--------FPa~-~~gG~~~lkal~~p~p--~ip~~ptGG--I~~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 151 LKF--------FPAE-ASGGISMVKSLVGPYG--DIRLMPTGG--ITPSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp EEE--------CSTT-TTTHHHHHHHHHTTCT--TCEEEEBSS--CCTTTHHHHHTSTTBCCEEECGGG
T ss_pred EEE--------CcCc-cccCHHHHHHHHHHhc--CCCeeeEcC--CCHHHHHHHHHCCCeEEEECchhc
Confidence 976 5431 2124688999988663 699998885 456889999999976677788874
No 209
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=86.99 E-value=13 Score=32.25 Aligned_cols=113 Identities=12% Similarity=0.163 Sum_probs=75.7
Q ss_pred hhhc-CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 3 AIVL-GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 3 ai~~-GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+++. ||+.+=+.-...+.++.++..+.|.+..-. ++.+=.+. + ..+ ++++|.+|++ +.|
T Consensus 159 ~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~-~~~l~vDa------n---------~~~-~~~~A~~~~~~l~~~~ 221 (383)
T 3i4k_A 159 RIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGD-RVSLRIDI------N---------ARW-DRRTALHYLPILAEAG 221 (383)
T ss_dssp HHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTT-TSEEEEEC------T---------TCS-CHHHHHHHHHHHHHTT
T ss_pred HHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCC-CCEEEEEC------C---------CCC-CHHHHHHHHHHHHhcC
Confidence 4555 999998887666778888776666544321 22222110 1 123 4789988865 468
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
++++- -+ -|.-|++-+++|++.+ ++|+++- .|=...++++++++.| +.=||+..
T Consensus 222 i~~iE---------qP--~~~~d~~~~~~l~~~~---~iPIa~d-E~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 222 VELFE---------QP--TPADDLETLREITRRT---NVSVMAD-ESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp CCEEE---------SC--SCTTCHHHHHHHHHHH---CCEEEES-TTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred CCEEE---------CC--CChhhHHHHHHHHhhC---CCCEEec-CccCCHHHHHHHHHcCCCCEEEEcc
Confidence 88885 11 2445888999999988 6998875 5566788899999877 66777763
No 210
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=86.92 E-value=0.12 Score=42.13 Aligned_cols=76 Identities=13% Similarity=0.224 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecc
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
+.+..+-+++.|+|.+.+.--+..|.+. ..|++++++|++.+ ++|++--||-.. .+++.++.+.|+.-+=++
T Consensus 158 ~~~~a~~~~~~G~~~i~~t~~~~~g~~~----g~~~~~~~~i~~~~---~iPvia~GGI~~-~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 158 LRDWVVEVEKRGAGEILLTSIDRDGTKS----GYDTEMIRFVRPLT---TLPIIASGGAGK-MEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCEEEEecccCCCCcC----CCCHHHHHHHHHhC---CCCEEEECCCCC-HHHHHHHHHcCCcHhhcc
Confidence 3344444667788888765333334432 24788999999887 699998886554 456899999999988888
Q ss_pred hHHH
Q 029526 147 TEVR 150 (192)
Q Consensus 147 T~l~ 150 (192)
+.+.
T Consensus 230 ~al~ 233 (247)
T 3tdn_A 230 TAAV 233 (247)
T ss_dssp ----
T ss_pred HHHH
Confidence 7764
No 211
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=86.88 E-value=15 Score=32.27 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=76.6
Q ss_pred hhhc-CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 3 AIVL-GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 3 ai~~-GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
+++. ||+.+=+.-. .+.++.++..+.|.+.. -++.+=.+ .+ ..+ ++++|.+|++ +-+
T Consensus 179 ~~~~~G~~~~K~KvG-~~~~~d~~~v~avR~~~--~~~~l~vD------aN---------~~w-~~~~A~~~~~~l~~~~ 239 (398)
T 4dye_A 179 VVEEGGFDAVKLKGT-TDCAGDVAILRAVREAL--PGVNLRVD------PN---------AAW-SVPDSVRAGIALEELD 239 (398)
T ss_dssp HHHHHCCSEEEEECC-SCHHHHHHHHHHHHHHC--TTSEEEEE------CT---------TCS-CHHHHHHHHHHHGGGC
T ss_pred HHHhcCCCEEEEecC-CCHHHHHHHHHHHHHhC--CCCeEEee------CC---------CCC-CHHHHHHHHHHHhhcC
Confidence 4566 9999888765 56788888777776665 23333222 11 123 5789998866 457
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
++++- .|--|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.=||+....
T Consensus 240 i~~iE-------------qP~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 294 (398)
T 4dye_A 240 LEYLE-------------DPCVGIEGMAQVKAKV---RIPLCT-NMCVVRFEDFAPAMRLNAVDVIHGDVYK 294 (398)
T ss_dssp CSEEE-------------CCSSHHHHHHHHHHHC---CSCEEE-SSSCCSGGGHHHHHHTTCCSEEEECHHH
T ss_pred CCEEc-------------CCCCCHHHHHHHHhhC---CCCEEe-CCcCCCHHHHHHHHHhCCCCEEEeCccc
Confidence 77663 2333899999999887 699876 66767788899999877 7777876443
No 212
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=86.74 E-value=11 Score=32.86 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=78.9
Q ss_pred hhhhcCCCEeE---eeCCCCCHH---HHHHHHHHHHHHHHhCCCeEEEec---cccccCCCCCccccccccCCCHHH---
Q 029526 2 EAIVLGFDSLM---VDGSHLPFK---DNISHTKYISFLAHSKGMLVEAEL---GRLSGTEDGLTVEDYEAKLTDVNQ--- 69 (192)
Q Consensus 2 ~ai~~GFtSVM---~D~S~l~~e---eNi~~Tk~vv~~Ah~~gv~VEaEl---G~i~g~e~~~~~~~~~~~~T~pee--- 69 (192)
+|+++|-+-|- +=+|.-+-+ ++++...+|.+-|++.|+++=.|+ +.- ..+... .+..--+|+-
T Consensus 118 ~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~--~~~~~~---~~~a~~~p~~V~~ 192 (332)
T 3iv3_A 118 RLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDET--ISNNSS---VEFAKVKVHKVND 192 (332)
T ss_dssp HHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTT--BSCTTS---HHHHTTHHHHHHH
T ss_pred HHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCC--CCCCcc---hhhhccCHHHHHH
Confidence 46777766553 234455543 789999999999999999999997 431 111110 0000113433
Q ss_pred -HHHHh-hhhCCcEEEEec-CcCC---CCCCCCCCCCCHH-HHHHHHhhhccCCccEE-eecCCCCCHHHHHH----HHh
Q 029526 70 -AEEFI-DETDIDALAVCI-GNVH---GKYPSSGPNLKLD-LLKDLHALSSKKGVLLV-LHGASGLSAELIKG----CIE 137 (192)
Q Consensus 70 -a~~Fv-~~TgvD~LAvai-Gt~H---G~y~~~~p~ld~~-~L~~I~~~~~~~~iPLV-lHGgSG~~~e~~~~----~i~ 137 (192)
++.|. .+-|+|++=+-+ ||.. |.=++ .+..+-+ ..+.+++.+...++|.| |=||. ++++|.+ |++
T Consensus 193 a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~-~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~--~~~~fl~~v~~A~~ 269 (332)
T 3iv3_A 193 AMKVFSAERFGIDVLKVEVPVNMVYVEGFAEG-EVVYSKEEAAQAFREQEASTDLPYIYLSAGV--SAELFQETLVFAHK 269 (332)
T ss_dssp HHHHHTSGGGCCSEEEECCSSCGGGBTTTCSS-CCCBCHHHHHHHHHHHHHTCSSCEEEECTTC--CHHHHHHHHHHHHH
T ss_pred HHHHHhhcCcCCcEEEEecCCChhhhcccccc-cccccHHHHHHHHHHHHhcCCCCEEEECCCC--CHHHHHHHHHHHHH
Confidence 44443 356999998862 2221 11011 1222222 22334444443479965 77764 7777665 567
Q ss_pred cCC--eEeecchHHH
Q 029526 138 RGV--RKFNVNTEVR 150 (192)
Q Consensus 138 ~Gi--~KINi~T~l~ 150 (192)
.|. +=+=++-.+.
T Consensus 270 aGa~f~Gv~~GRnvw 284 (332)
T 3iv3_A 270 AGAKFNGVLCGRATW 284 (332)
T ss_dssp HTCCCCEEEECHHHH
T ss_pred cCCCcceEEeeHHHH
Confidence 887 6776665553
No 213
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=86.55 E-value=9.8 Score=32.72 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=72.4
Q ss_pred cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHh-CCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hCCcE
Q 029526 6 LGFDSLMVDGSHLPFKDNISHTKYISFLAHS-KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TDIDA 81 (192)
Q Consensus 6 ~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~-~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---TgvD~ 81 (192)
.||+.+=+--...+.++.++..+.|.+..-. ..+.|.+ + ..+ ++++|.+|+++ .++++
T Consensus 157 ~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~vDa--------n---------~~~-~~~~a~~~~~~l~~~~i~~ 218 (370)
T 1chr_A 157 RRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDV--------N---------QAW-DEQVASVYIPELEALGVEL 218 (370)
T ss_dssp TCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEEEC--------T---------TCC-CTTHHHHHTHHHHTTTEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEEC--------C---------CCC-CHHHHHHHHHHHHhcCCCE
Confidence 6888887776666677777777666554322 1222211 0 123 36788888654 57777
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
+- -+ -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+.
T Consensus 219 iE---------qP--~~~~~~~~~~~l~~~~---~iPia~-dE~~~~~~~~~~~~~~~~~d~v~~k 269 (370)
T 1chr_A 219 IE---------QP--VGRENTQALRRLSDNN---RVAIMA-DESLSTLASAFDLARDRSVDVFSLK 269 (370)
T ss_dssp EE---------CC--SCTTCHHHHHHHHHHS---CSEEEE-SSSCCSHHHHHHHHTTTSCSEEEEC
T ss_pred EE---------CC--CCcccHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 74 11 2445888899999887 699887 66667788999999876 6677775
No 214
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=86.53 E-value=2.9 Score=33.46 Aligned_cols=72 Identities=13% Similarity=0.155 Sum_probs=55.4
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.+|+|+.+-. +-|+|.+.+ |+. +.+ -++.|+.++.... ++|++-=| |+..+++...++.|..=+
T Consensus 112 ~t~~e~~~A~-~~Gad~v~~--------fpa--~~~gG~~~lk~l~~~~~--~ipvvaiG--GI~~~n~~~~l~aGa~~v 176 (207)
T 2yw3_A 112 LTPTEVERAL-ALGLSALKF--------FPA--EPFQGVRVLRAYAEVFP--EVRFLPTG--GIKEEHLPHYAALPNLLA 176 (207)
T ss_dssp CSHHHHHHHH-HTTCCEEEE--------TTT--TTTTHHHHHHHHHHHCT--TCEEEEBS--SCCGGGHHHHHTCSSBSC
T ss_pred CCHHHHHHHH-HCCCCEEEE--------ecC--ccccCHHHHHHHHhhCC--CCcEEEeC--CCCHHHHHHHHhCCCcEE
Confidence 4699987744 669999987 332 222 4677888888763 59999888 566799999999999999
Q ss_pred ecchHHHH
Q 029526 144 NVNTEVRK 151 (192)
Q Consensus 144 Ni~T~l~~ 151 (192)
=++|.+..
T Consensus 177 avgSai~~ 184 (207)
T 2yw3_A 177 VGGSWLLQ 184 (207)
T ss_dssp EEESGGGS
T ss_pred EEehhhhC
Confidence 99998853
No 215
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.32 E-value=15 Score=31.60 Aligned_cols=65 Identities=23% Similarity=0.231 Sum_probs=44.3
Q ss_pred hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEE---ee-cCCC-CCHHHHHHHHhcCCeEeecchHHH
Q 029526 76 ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLV---LH-GASG-LSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 76 ~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLV---lH-GgSG-~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+-|.|++-+ || + -+.+.+++|.+.+ ++|++ +- |.+. ++ .++.-++|++-|=+...+.
T Consensus 200 eAGAd~i~~-----e~------~-~~~e~~~~i~~~l---~~P~lan~~~~g~~~~~~---~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 200 EAGADATFV-----EA------P-ANVDELKEVSAKT---KGLRIANMIEGGKTPLHT---PEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp HTTCSEEEE-----CC------C-CSHHHHHHHHHHS---CSEEEEEECTTSSSCCCC---HHHHHHHTCCEEEECSHHH
T ss_pred HcCCCEEEE-----cC------C-CCHHHHHHHHHhc---CCCEEEEeccCCCCCCCC---HHHHHHcCCeEEEEchHHH
Confidence 568887765 11 1 2677788888877 69983 32 3343 44 4455567999999999888
Q ss_pred HHHHHHhc
Q 029526 151 KAYMDSLS 158 (192)
Q Consensus 151 ~a~~~~~~ 158 (192)
.+.+.+++
T Consensus 262 raa~~a~~ 269 (318)
T 1zlp_A 262 YATARALV 269 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777653
No 216
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=86.28 E-value=16 Score=31.83 Aligned_cols=114 Identities=15% Similarity=0.171 Sum_probs=77.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh---C
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---D 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---g 78 (192)
++++.||+.+=+.-...++++.++..+.|.+..-.-++.+=.+ .+.--++++|.+|+++. +
T Consensus 174 ~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vD----------------aN~~w~~~~A~~~~~~L~~~~ 237 (391)
T 4e8g_A 174 EKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVD----------------GNRSLPSRDALRLSRECPEIP 237 (391)
T ss_dssp HHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEE----------------CTTCCCHHHHHHHHHHCTTSC
T ss_pred HHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEe----------------CCCCCCHHHHHHHHHHHhhcC
Confidence 3567899999888776678888887777655442112222111 01123589999998764 3
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
+ ++ . .|.-|++-++++++.+ ++|+++ |-|=.+..+++++++.| +.=||+....
T Consensus 238 i-~i------------E-eP~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~~~~~a~d~v~ik~~~ 291 (391)
T 4e8g_A 238 F-VL------------E-QPCNTLEEIAAIRGRV---QHGIYL-DESGEDLSTVIRAAGQGLCDGFGMKLTR 291 (391)
T ss_dssp E-EE------------E-SCSSSHHHHHHHGGGC---CSCEEE-STTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred e-EE------------e-cCCccHHHHHHHHhhC---CCCEEe-CCCCCCHHHHHHHHHcCCCCEEEeCccc
Confidence 3 33 2 3555889899998887 699887 77777889999999877 6677886544
No 217
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=86.27 E-value=8 Score=33.76 Aligned_cols=122 Identities=19% Similarity=0.178 Sum_probs=79.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---- 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---- 77 (192)
++++.||+.+=+.-...++++.++..+.|.+..- ++. +. .+ .+.--++++|.+|+++.
T Consensus 154 ~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~~--~~~-------L~-------vD--aN~~w~~~~A~~~~~~L~~~~ 215 (389)
T 3s5s_A 154 RAAAMGFRALKVKVGGRLAASDPARIEAIHAAAP--GAS-------LI-------LD--GNGGLTAGEALALVAHARRLG 215 (389)
T ss_dssp HHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHCT--TCE-------EE-------EE--CTTCSCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCeEEEEecCCChHHHHHHHHHHHHhCC--CCe-------EE-------EE--CCCCCCHHHHHHHHHHHhhCC
Confidence 3456788888887766667777777666655431 111 10 00 11123689999998765
Q ss_pred -CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHHHHHH
Q 029526 78 -DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRKAYMD 155 (192)
Q Consensus 78 -gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~a~~~ 155 (192)
++.++= ..-|.-|++-++++++.+ ++|+++ |-|=.+..+++++++.| +.=||+.... -.++.
T Consensus 216 ~~i~~iE-----------eP~~~~d~~~~~~l~~~~---~iPIa~-dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~ 279 (389)
T 3s5s_A 216 ADVALLE-----------QPVPRDDWDGMKEVTRRA---GVDVAA-DESAASAEDVLRVAAERAATVVNIKLMK-GGIAE 279 (389)
T ss_dssp CEEEEEE-----------CCSCTTCHHHHHHHHHHS---SSCEEE-STTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHH
T ss_pred CCeEEEE-----------CCCCcccHHHHHHHHhhC---CCCEEE-CCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHH
Confidence 223221 112334899999999887 699887 77878889999999877 6778887655 44544
Q ss_pred Hh
Q 029526 156 SL 157 (192)
Q Consensus 156 ~~ 157 (192)
++
T Consensus 280 ~~ 281 (389)
T 3s5s_A 280 AL 281 (389)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 218
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=86.22 E-value=2.2 Score=33.99 Aligned_cols=119 Identities=16% Similarity=0.146 Sum_probs=67.4
Q ss_pred hhhhcCCCEeEeeCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGS--HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S--~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
.|.++|.+.|-+-+. ..+ + ..++++.+++.|+. +|..-. .-|+.+..+.+ ..++
T Consensus 86 ~~~~~Gad~v~vh~~~~~~~--~----~~~~~~~~~~~g~~----ig~~~~------------p~t~~e~~~~~--~~~~ 141 (230)
T 1rpx_A 86 DFIKAGADIVSVHCEQSSTI--H----LHRTINQIKSLGAK----AGVVLN------------PGTPLTAIEYV--LDAV 141 (230)
T ss_dssp HHHHTTCSEEEEECSTTTCS--C----HHHHHHHHHHTTSE----EEEEEC------------TTCCGGGGTTT--TTTC
T ss_pred HHHHcCCCEEEEEecCccch--h----HHHHHHHHHHcCCc----EEEEeC------------CCCCHHHHHHH--HhhC
Confidence 466778887776665 322 1 23556666666542 332210 00222222222 2468
Q ss_pred cEEEEecCcCCCCCCCCCCCCC---HHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 80 DALAVCIGNVHGKYPSSGPNLK---LDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 80 D~LAvaiGt~HG~y~~~~p~ld---~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
|++- +.+++..+.+ +..+ ++.+++|++.+.. .++|+++=|| +..+++.++++.|..=+=++|.+.
T Consensus 142 d~vl--~~~~~pg~~g--~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GG--I~~~n~~~~~~aGad~vvvgSaI~ 211 (230)
T 1rpx_A 142 DLVL--IMSVNPGFGG--QSFIESQVKKISDLRKICAERGLNPWIEVDGG--VGPKNAYKVIEAGANALVAGSAVF 211 (230)
T ss_dssp SEEE--EESSCTTCSS--CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESS--CCTTTHHHHHHHTCCEEEESHHHH
T ss_pred CEEE--EEEEcCCCCC--ccccHHHHHHHHHHHHHHHhcCCCceEEEECC--CCHHHHHHHHHcCCCEEEEChhhh
Confidence 8663 3334322332 2333 4555666665521 1589999895 556889999999999999999885
No 219
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=86.21 E-value=15 Score=31.89 Aligned_cols=114 Identities=16% Similarity=0.111 Sum_probs=77.0
Q ss_pred hhhhc-CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVL-GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~-GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++++. ||+.+=+.-...++++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|+++ .
T Consensus 177 ~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~-~~~l~vD------aN---------~~~-~~~~A~~~~~~l~~~ 239 (383)
T 3toy_A 177 TACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGP-DIALMLD------FN---------QSL-DPAEATRRIARLADY 239 (383)
T ss_dssp HHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCT-TSEEEEE------CT---------TCS-CHHHHHHHHHHHGGG
T ss_pred HHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCC-CCeEEEe------CC---------CCC-CHHHHHHHHHHHHhh
Confidence 35667 999999887777788888887777654421 2322111 01 123 57889888654 5
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+++++- -+ -|.-|++-+++|++.+ ++|++.-. |=.+.++++++++.| +.=||+..
T Consensus 240 ~i~~iE---------eP--~~~~d~~~~~~l~~~~---~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 240 DLTWIE---------EP--VPQENLSGHAAVRERS---EIPIQAGE-NWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp CCSEEE---------CC--SCTTCHHHHHHHHHHC---SSCEEECT-TCCHHHHHHHHHHHTCCSEECCCT
T ss_pred CCCEEE---------CC--CCcchHHHHHHHHhhc---CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEeCc
Confidence 777774 11 2334899999999887 69988754 556678899999877 66677764
No 220
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=86.06 E-value=4.3 Score=33.03 Aligned_cols=119 Identities=14% Similarity=0.130 Sum_probs=70.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.+.++|.+.|-|=+-..+ + ..++++.++++|+.+ |-.- ..-|+.+..+.++. .+|.
T Consensus 82 ~~~~aGad~itvH~Ea~~---~---~~~~i~~i~~~G~k~----gval------------~p~t~~e~l~~~l~--~~D~ 137 (228)
T 3ovp_A 82 PMAVAGANQYTFHLEATE---N---PGALIKDIRENGMKV----GLAI------------KPGTSVEYLAPWAN--QIDM 137 (228)
T ss_dssp HHHHHTCSEEEEEGGGCS---C---HHHHHHHHHHTTCEE----EEEE------------CTTSCGGGTGGGGG--GCSE
T ss_pred HHHHcCCCEEEEccCCch---h---HHHHHHHHHHcCCCE----EEEE------------cCCCCHHHHHHHhc--cCCe
Confidence 356677777666332211 1 245566667766532 2210 01244455555554 3787
Q ss_pred EEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+- +.+++=.+.+. ...--++.++++++... ++|+..=|| +..+.++.+++.|..-+=++|.+.
T Consensus 138 Vl--~msv~pGf~Gq~f~~~~l~ki~~lr~~~~--~~~I~VdGG--I~~~t~~~~~~aGAd~~VvGsaIf 201 (228)
T 3ovp_A 138 AL--VMTVEPGFGGQKFMEDMMPKVHWLRTQFP--SLDIEVDGG--VGPDTVHKCAEAGANMIVSGSAIM 201 (228)
T ss_dssp EE--EESSCTTTCSCCCCGGGHHHHHHHHHHCT--TCEEEEESS--CSTTTHHHHHHHTCCEEEESHHHH
T ss_pred EE--EeeecCCCCCcccCHHHHHHHHHHHHhcC--CCCEEEeCC--cCHHHHHHHHHcCCCEEEEeHHHh
Confidence 64 45554222220 11123566777776653 589999995 567999999999999999999875
No 221
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=85.99 E-value=12 Score=32.91 Aligned_cols=113 Identities=13% Similarity=0.169 Sum_probs=73.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++.+.||+.|=+-... ++++.++..+.|.+..- -++.+=.+ .+ ..| ++++|.+|+++ .+
T Consensus 208 ~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~a~G-~d~~l~vD------an---------~~~-~~~~a~~~~~~l~~~~ 269 (441)
T 2hxt_A 208 EAVADGFRTIKLKVGA-NVQDDIRRCRLARAAIG-PDIAMAVD------AN---------QRW-DVGPAIDWMRQLAEFD 269 (441)
T ss_dssp HHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHC-SSSEEEEE------CT---------TCC-CHHHHHHHHHTTGGGC
T ss_pred HHHHcCCCEEEEccCC-CHHHHHHHHHHHHHhcC-CCCeEEEE------CC---------CCC-CHHHHHHHHHHHHhcC
Confidence 4678899999887654 56777766666655442 12333111 01 123 58899999765 57
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
++++-- + -|.-|++-+++|++.++ ++|++.-+ |=...++++++++.| +.=||+.
T Consensus 270 i~~iEq----------P-~~~~d~~~~~~l~~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 270 IAWIEE----------P-TSPDDVLGHAAIRQGIT--PVPVSTGE-HTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp CSCEEC----------C-SCTTCHHHHHHHHHHHT--TSCEEECT-TCCSHHHHHHHHHHTCCSEECCC
T ss_pred CCeeeC----------C-CCHHHHHHHHHHHhhCC--CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEeC
Confidence 886641 1 23458999999998863 49988755 566778899999887 5566764
No 222
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=85.90 E-value=2.4 Score=35.46 Aligned_cols=76 Identities=8% Similarity=0.023 Sum_probs=51.6
Q ss_pred CCHHHHHHHh---hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 65 TDVNQAEEFI---DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 65 T~peea~~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
-+.++..+++ .+.|++.+-+..- .++.|-+ .-.-++++++.|++. .++|+++|. ...+++++++++|+.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~-~~~~~~p-~~~~~~e~~~~i~~~---~~~~v~~l~---~n~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSF-VSPKWVP-QLADSREVMAGIRRA---DGVRYSVLV---PNMKGYEAAAAAHAD 94 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEEC-SCTTTCG-GGTTHHHHHHHSCCC---SSSEEEEEC---SSHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccC-cCccccc-cccCHHHHHHHHHhC---CCCEEEEEe---CCHHHHHHHHHCCCC
Confidence 4566766654 5689999988532 2233321 012356777777543 269999997 347899999999999
Q ss_pred EeecchH
Q 029526 142 KFNVNTE 148 (192)
Q Consensus 142 KINi~T~ 148 (192)
.|+|...
T Consensus 95 ~V~i~~~ 101 (295)
T 1ydn_A 95 EIAVFIS 101 (295)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999853
No 223
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=85.78 E-value=6.4 Score=39.54 Aligned_cols=126 Identities=18% Similarity=0.276 Sum_probs=81.0
Q ss_pred hhhhcCCCEe-EeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hh
Q 029526 2 EAIVLGFDSL-MVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ET 77 (192)
Q Consensus 2 ~ai~~GFtSV-M~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~T 77 (192)
+|+++|.+.| .||+-+- -+|. +...+.+++.|..+++=+-..++. .. ......++++...++++ +.
T Consensus 635 ~a~~~Gvd~irif~~~sd--~~~~---~~~~~~~~e~g~~~~~~i~~~~~~---~~--pe~~~~~~~~~~~~~a~~~~~~ 704 (1150)
T 3hbl_A 635 ESAKAGIDVFRIFDSLNW--VDQM---KVANEAVQEAGKISEGTICYTGDI---LN--PERSNIYTLEYYVKLAKELERE 704 (1150)
T ss_dssp HHHHTTCCEEEEECTTCC--GGGG---HHHHHHHHHTTCEEEEEEECCSCT---TC--TTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHhCCcCEEEEEeeCCH--HHHH---HHHHHHHHHHhhheeEEEeecccc---cC--hhhcCCCCHHHHHHHHHHHHHc
Confidence 5677888877 5665432 2333 455666677787777665554321 11 11123578887777755 47
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEee--cCCCCCHHHHHHHHhcCCeEeec
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLH--GASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlH--GgSG~~~e~~~~~i~~Gi~KINi 145 (192)
|+|.|.+. -.=|.- .|.-=.++++.|++.+ ++||-+| =.+|+.-...-.|++.|+.-|..
T Consensus 705 Ga~~i~l~--Dt~G~~---~P~~~~~lv~~l~~~~---~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ 766 (1150)
T 3hbl_A 705 GFHILAIK--DMAGLL---KPKAAYELIGELKSAV---DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDT 766 (1150)
T ss_dssp TCSEEEEE--ETTCCC---CHHHHHHHHHHHHHHC---CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCCeeeEc--CccCCC---CHHHHHHHHHHHHHhc---CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 99987664 333332 2554567778888876 5776665 57899999999999999998754
No 224
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=85.70 E-value=17 Score=31.60 Aligned_cols=123 Identities=11% Similarity=0.004 Sum_probs=82.1
Q ss_pred hhhhc---CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh--
Q 029526 2 EAIVL---GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE-- 76 (192)
Q Consensus 2 ~ai~~---GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~-- 76 (192)
++++. ||+.+=+.-...++++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|+++
T Consensus 181 ~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~-~~~l~vD------aN---------~~~-~~~~A~~~~~~l~ 243 (390)
T 3ugv_A 181 LKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGR-DTALMVD------FN---------QGL-DMAEAMHRTRQID 243 (390)
T ss_dssp HHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCT-TSEEEEE------CT---------TCC-CHHHHHHHHHHHT
T ss_pred HHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCC-CCEEEEE------CC---------CCC-CHHHHHHHHHHHH
Confidence 34566 999999887776788888888777665422 2322221 01 123 58899888765
Q ss_pred -hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHHHHH
Q 029526 77 -TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRKAYM 154 (192)
Q Consensus 77 -TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~a~~ 154 (192)
.+++++-= + -|.-|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.=||+.....-.++
T Consensus 244 ~~~i~~iEq---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit 308 (390)
T 3ugv_A 244 DLGLEWIEE---------P--VVYDNFDGYAQLRHDL---KTPLMI-GENFYGPREMHQALQAGACDLVMPDFMRIGGVS 308 (390)
T ss_dssp TSCCSEEEC---------C--SCTTCHHHHHHHHHHC---SSCEEE-CTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHH
T ss_pred hhCCCEEEC---------C--CCcccHHHHHHHHHhc---CCCEEe-CCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 47777741 1 1334899999999887 699887 55667788899999887 777888765443343
Q ss_pred HH
Q 029526 155 DS 156 (192)
Q Consensus 155 ~~ 156 (192)
.+
T Consensus 309 ~~ 310 (390)
T 3ugv_A 309 GW 310 (390)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 225
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=85.52 E-value=4.4 Score=31.11 Aligned_cols=77 Identities=9% Similarity=0.126 Sum_probs=56.1
Q ss_pred CCHHHHHHHhhhhCCc-EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 65 TDVNQAEEFIDETDID-ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD-~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.++.+..+-+...+.. .|-..+ +..|.+++ ++++.+++++.+. ++|++.=||.+.|+ ++.++.+.|+.-+
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~-~~~g~~~g----~~~~~i~~~~~~~---~~Pvia~~g~~~~~-~~~~~~~~G~~~~ 200 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSI-DRDGTKSG----YDTEMIRFVRPLT---TLPIIASGGAGKME-HFLEAFLAGADAA 200 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEET-TTTTCCSC----CCHHHHHHHGGGC---CSCEEEESCCCSHH-HHHHHHHHTCSEE
T ss_pred cCHHHHHHHHhhcCCCeEEEEec-CCCCcccc----ccHHHHHHHHHhc---CCCEEecCCCCCHH-HHHHHHHcCcHHH
Confidence 4666666667788887 555555 34565543 3478888888776 69999888887765 5888889999999
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
=+++.+.
T Consensus 201 ~vg~a~~ 207 (237)
T 3cwo_X 201 LAASVFH 207 (237)
T ss_dssp EESHHHH
T ss_pred hhhHHHH
Confidence 8888773
No 226
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=85.39 E-value=2.7 Score=38.99 Aligned_cols=132 Identities=13% Similarity=0.108 Sum_probs=80.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEec-cccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAEL-GRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaEl-G~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.|+..|+|+|..|....|.-.+....+.+.+.++..++.+=.-+ +.+..... .. ......++++.+++++.-+|.
T Consensus 111 ~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~-~~---~~g~~~~~~el~~l~~~~~v~ 186 (608)
T 3nqb_A 111 AVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPG-LE---RGGADFDAAILADLLSWPEIG 186 (608)
T ss_dssp HHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTT-SC---CCSCCCCHHHHHHHHTSTTEE
T ss_pred HHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCCCCc-cc---cCcccCCHHHHHHHHhccCcc
Confidence 57889999999876555554445666777888887777665555 33321100 00 011235778999999877765
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
.+.. +++..|.. .-+-+.++.|..+. ..+.|+..| ..+...+.+...++.|+.-...
T Consensus 187 glgE-~~~~~~v~-----~~d~~l~~~l~~A~-~~g~pV~~H-a~~~~~~~L~~~~~aGv~~~H~ 243 (608)
T 3nqb_A 187 GIAE-IMNMRGVI-----ERDPRMSGIVQAGL-AAEKLVCGH-ARGLKNADLNAFMAAGVSSDHE 243 (608)
T ss_dssp EEEE-ECCHHHHH-----TTCHHHHHHHHHHH-HHTCEEEEC-CTTCCHHHHHHHHHTTCCEECC
T ss_pred eeeE-eeccCCcC-----CCcHHHHHHHHHHH-HcCCEEEEc-CCCCCHHHHHHHHHcCCCeeec
Confidence 5543 22222211 11334445454322 237999999 4578888899999999876553
No 227
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=85.28 E-value=5.9 Score=27.31 Aligned_cols=69 Identities=23% Similarity=0.235 Sum_probs=49.8
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+++++...|.+-+-+. .|..+ ++++++|++......+|+++--+++ ..+...++.+.|+.-
T Consensus 32 ~~~~~~al~~l~~~~~dlvllD~~---------~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~-~~~~~~~~~~~Ga~~ 101 (122)
T 3gl9_A 32 AENGQIALEKLSEFTPDLIVLXIM---------MPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG-GEEDESLALSLGARK 101 (122)
T ss_dssp ESSHHHHHHHHTTBCCSEEEECSC---------CSSSCHHHHHHHHHTSTTTTTSCEEEEESCC-SHHHHHHHHHTTCSE
T ss_pred eCCHHHHHHHHHhcCCCEEEEecc---------CCCCcHHHHHHHHHhcccccCCCEEEEecCC-chHHHHHHHhcChhh
Confidence 467889999999999998887642 13322 7888999875322369999887765 455678888998754
No 228
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=85.22 E-value=9.9 Score=31.50 Aligned_cols=147 Identities=10% Similarity=0.122 Sum_probs=80.4
Q ss_pred hhhhcCCCEeEeeCCCC---CHHHHHHHHHHHHHHHHhCCCe---EEEeccccccCCCCC--ccccccccCCCHHHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHL---PFKDNISHTKYISFLAHSKGML---VEAELGRLSGTEDGL--TVEDYEAKLTDVNQAEEF 73 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l---~~eeNi~~Tk~vv~~Ah~~gv~---VEaElG~i~g~e~~~--~~~~~~~~~T~peea~~F 73 (192)
.+-++||+.|-+-.... |.+.+-...+++.+.+..+|+. +-+-.+ ....-.-. .....+..+...+.+.++
T Consensus 39 ~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~-~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 117 (335)
T 2qw5_A 39 KLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVG-ATRTFDPSSNYPEQRQEALEYLKSRVDI 117 (335)
T ss_dssp HHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECC-CCSSSCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEEec-cCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35678999998865433 3333335567888889999998 877322 21100000 000011122344567777
Q ss_pred hhhhCCcEEEEecC-cCCCCCCCCCC-------------CCC----HHHHHHHHhhhccCCccEEeecC-----C-CCCH
Q 029526 74 IDETDIDALAVCIG-NVHGKYPSSGP-------------NLK----LDLLKDLHALSSKKGVLLVLHGA-----S-GLSA 129 (192)
Q Consensus 74 v~~TgvD~LAvaiG-t~HG~y~~~~p-------------~ld----~~~L~~I~~~~~~~~iPLVlHGg-----S-G~~~ 129 (192)
.++-|++.+ +..+ +.+|.|++..+ .-. .+.|+++.+...+.+|.|++|=- + ..+.
T Consensus 118 A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~t~ 196 (335)
T 2qw5_A 118 TAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAIEPITHWETPGPNKL 196 (335)
T ss_dssp HHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEECCCCTTTCSSCCSH
T ss_pred HHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccccccCCH
Confidence 788999998 4322 23455532111 011 23345555544445799999642 1 2356
Q ss_pred HHHHHHHhc-C--CeEeecchHHH
Q 029526 130 ELIKGCIER-G--VRKFNVNTEVR 150 (192)
Q Consensus 130 e~~~~~i~~-G--i~KINi~T~l~ 150 (192)
+++.+.++. + -.+++++|.-.
T Consensus 197 ~~~~~ll~~v~~~~vgl~~D~~H~ 220 (335)
T 2qw5_A 197 SQLIEFLKGVKSKQVGVVIDSAHE 220 (335)
T ss_dssp HHHHHHHTTCCCTTEEEEEEHHHH
T ss_pred HHHHHHHHhcCCCCeeEEEecccc
Confidence 677776643 3 46788877653
No 229
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=85.13 E-value=2.4 Score=35.21 Aligned_cols=71 Identities=15% Similarity=0.084 Sum_probs=53.3
Q ss_pred CCHHHHHHHhhhh-----C-CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc
Q 029526 65 TDVNQAEEFIDET-----D-IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER 138 (192)
Q Consensus 65 T~peea~~Fv~~T-----g-vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~ 138 (192)
++|+.++.|.+.. + ||+.+ + |+ .-+++++++|++.+. ++|+.+=||-.. .|+++++.+
T Consensus 139 ~~~~~~~~~a~~g~~~~~~~VYl~s-~-G~----------~~~~~~i~~i~~~~~--~~Pv~vGgGI~t-~e~a~~~~~- 202 (240)
T 1viz_A 139 LNMDDIVAYARVSELLQLPIFYLEY-S-GV----------LGDIEAVKKTKAVLE--TSTLFYGGGIKD-AETAKQYAE- 202 (240)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC-T-TS----------CCCHHHHHHHHHTCS--SSEEEEESSCCS-HHHHHHHHT-
T ss_pred CCHHHHHHHHHhCcccCCCEEEEeC-C-Cc----------cChHHHHHHHHHhcC--CCCEEEEeccCC-HHHHHHHHh-
Confidence 6789999998765 4 35444 2 32 127899999998772 499999887654 467999888
Q ss_pred CCeEeecchHHHH
Q 029526 139 GVRKFNVNTEVRK 151 (192)
Q Consensus 139 Gi~KINi~T~l~~ 151 (192)
|..+|-++|.+-.
T Consensus 203 gAd~VIVGSa~v~ 215 (240)
T 1viz_A 203 HADVIVVGNAVYE 215 (240)
T ss_dssp TCSEEEECTHHHH
T ss_pred CCCEEEEChHHHh
Confidence 9999999998753
No 230
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=85.05 E-value=4.3 Score=34.64 Aligned_cols=65 Identities=22% Similarity=0.198 Sum_probs=46.3
Q ss_pred hcCCCEeEeeCC-------------CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHH--
Q 029526 5 VLGFDSLMVDGS-------------HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQ-- 69 (192)
Q Consensus 5 ~~GFtSVM~D~S-------------~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pee-- 69 (192)
++||+.+.. |+ ..+++|-+..|+.|++-+.. ..|=+.++.-+ .-.+|++
T Consensus 52 ~aG~d~ilv-GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~--~~vvaD~pfgs-------------y~~s~~~a~ 115 (281)
T 1oy0_A 52 EAGIPVLLV-GDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPH--ALVVADLPFGS-------------YEAGPTAAL 115 (281)
T ss_dssp TTTCCEEEE-CTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTT--SEEEEECCTTS-------------STTCHHHHH
T ss_pred HcCCCEEEE-CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCC--CeEEEECCCCc-------------ccCCHHHHH
Confidence 578887766 43 34799999999999888753 33337766542 1246777
Q ss_pred --HHHHhhhhCCcEEEEe
Q 029526 70 --AEEFIDETDIDALAVC 85 (192)
Q Consensus 70 --a~~Fv~~TgvD~LAva 85 (192)
|.++++++|++++=+=
T Consensus 116 ~na~rl~~eaGa~aVklE 133 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLE 133 (281)
T ss_dssp HHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHhCCeEEEEC
Confidence 5889999999977654
No 231
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=85.00 E-value=1.4 Score=37.52 Aligned_cols=78 Identities=10% Similarity=0.109 Sum_probs=53.8
Q ss_pred HHHhhhhCCcEEEEecCcC-------------CCCCCCCCC--CCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 71 EEFIDETDIDALAVCIGNV-------------HGKYPSSGP--NLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 71 ~~Fv~~TgvD~LAvaiGt~-------------HG~y~~~~p--~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
.+-+++.|+|.+-++-++. .|.|.+ .| ...++.+++|++.+.. ++|++.=||-..+ ++..++
T Consensus 231 a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g-~~~~~~~~~~i~~i~~~~~~-~ipVi~~GGI~~~-~da~~~ 307 (336)
T 1f76_A 231 ADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSG-RPLQLKSTEIIRRLSLELNG-RLPIIGVGGIDSV-IAAREK 307 (336)
T ss_dssp HHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEE-GGGHHHHHHHHHHHHHHHTT-SSCEEEESSCCSH-HHHHHH
T ss_pred HHHHHHcCCcEEEEeCCcccccccccccccccCCCcCC-chhHHHHHHHHHHHHHHhCC-CCCEEEECCCCCH-HHHHHH
Confidence 4456678999999986542 111221 11 1235777888887731 4999988876654 558888
Q ss_pred HhcCCeEeecchHHHH
Q 029526 136 IERGVRKFNVNTEVRK 151 (192)
Q Consensus 136 i~~Gi~KINi~T~l~~ 151 (192)
+..|..=|-++|.+..
T Consensus 308 l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 308 IAAGASLVQIYSGFIF 323 (336)
T ss_dssp HHHTCSEEEESHHHHH
T ss_pred HHCCCCEEEeeHHHHh
Confidence 8999999999999753
No 232
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=84.73 E-value=9 Score=32.22 Aligned_cols=79 Identities=13% Similarity=0.210 Sum_probs=52.4
Q ss_pred CCCHHHHHHHhhh---hCCcEEEEec-CcCCCCCCC-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc
Q 029526 64 LTDVNQAEEFIDE---TDIDALAVCI-GNVHGKYPS-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER 138 (192)
Q Consensus 64 ~T~peea~~Fv~~---TgvD~LAvai-Gt~HG~y~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~ 138 (192)
..+++++.+.+++ .|+|.+-+.. |..-..|.+ ..+.++.+.|+++-+...+.++|+.+|-. .++.++.+++.
T Consensus 168 ~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~---~~~~i~~~l~~ 244 (423)
T 3feq_A 168 VDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY---TGRAIARAVRC 244 (423)
T ss_dssp CCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE---EHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC---ChHHHHHHHHc
Confidence 4678888888764 4788776653 222222211 12467888888887777667899999986 45667777777
Q ss_pred CCeEeec
Q 029526 139 GVRKFNV 145 (192)
Q Consensus 139 Gi~KINi 145 (192)
|+.-|--
T Consensus 245 g~~~i~H 251 (423)
T 3feq_A 245 GVRTIEH 251 (423)
T ss_dssp TCCEEEE
T ss_pred CCCEEec
Confidence 7665443
No 233
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=84.60 E-value=19 Score=31.05 Aligned_cols=116 Identities=11% Similarity=0.086 Sum_probs=78.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
++++.||+.+=+.-...++++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|++ +.+
T Consensus 156 ~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~-~~~l~vD------an---------~~~-~~~~A~~~~~~l~~~~ 218 (377)
T 3my9_A 156 AMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGE-RIDLRLD------FN---------QAL-TPFGAMKILRDVDAFR 218 (377)
T ss_dssp HHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGG-GSEEEEE------CT---------TCC-CTTTHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCC-CCeEEEe------CC---------CCc-CHHHHHHHHHHHhhcC
Confidence 35667999999988877889999888887765532 2322111 11 123 3567777755 457
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
++++- -+ -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+....
T Consensus 219 i~~iE---------qP--~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~i~~~~~d~v~~k~~~ 275 (377)
T 3my9_A 219 PTFIE---------QP--VPRRHLDAMAGFAAAL---DTPILA-DESCFDAVDLMEVVRRQAADAISVKIMK 275 (377)
T ss_dssp CSCEE---------CC--SCTTCHHHHHHHHHHC---SSCEEE-STTCSSHHHHHHHHHHTCCSEEECCHHH
T ss_pred CCEEE---------CC--CCccCHHHHHHHHHhC---CCCEEE-CCccCCHHHHHHHHHcCCCCEEEecccc
Confidence 87774 11 2334899999999887 699887 45667788899999877 6667876443
No 234
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=84.60 E-value=3.4 Score=33.86 Aligned_cols=79 Identities=10% Similarity=0.118 Sum_probs=50.9
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCc-cEEeecCCCC----CH--H--------
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGV-LLVLHGASGL----SA--E-------- 130 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~i-PLVlHGgSG~----~~--e-------- 130 (192)
+++++.+.+.+.|.|.+-+..++-|+.+. +.++-+.++++++..+..++ ++++|+...+ |+ +
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~ 95 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKR---KSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDF 95 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCC---CCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCC---CCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHHHHH
Confidence 68899999999999999986555554332 33433445556665555578 7999986432 22 2
Q ss_pred ---HHHHHHhcCCeEeecch
Q 029526 131 ---LIKGCIERGVRKFNVNT 147 (192)
Q Consensus 131 ---~~~~~i~~Gi~KINi~T 147 (192)
.+..|..+|+..|++.+
T Consensus 96 ~~~~i~~A~~lGa~~vv~h~ 115 (303)
T 3aal_A 96 LRAEIERTEAIGAKQLVLHP 115 (303)
T ss_dssp HHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 13345678888888743
No 235
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=84.59 E-value=5.5 Score=32.90 Aligned_cols=74 Identities=15% Similarity=0.182 Sum_probs=53.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH-hcCCeEe
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI-ERGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i-~~Gi~KI 143 (192)
.||.+|.+.+.+-|||-+== ||.-+.....-.+++|+++.+..+ + .+.+==|+|+..+.+.+.+ ..|+.-+
T Consensus 133 ~d~~~ale~L~~lGv~rILT-----SG~~~~~~a~~g~~~L~~Lv~~a~--~-ri~Im~GgGV~~~Ni~~l~~~tGv~e~ 204 (224)
T 2bdq_A 133 SDQKKSIDQLVALGFTRILL-----HGSSNGEPIIENIKHIKALVEYAN--N-RIEIMVGGGVTAENYQYICQETGVKQA 204 (224)
T ss_dssp TTHHHHHHHHHHTTCCEEEE-----CSCSSCCCGGGGHHHHHHHHHHHT--T-SSEEEECSSCCTTTHHHHHHHHTCCEE
T ss_pred cCHHHHHHHHHHcCCCEEEC-----CCCCCCCcHHHHHHHHHHHHHhhC--C-CeEEEeCCCCCHHHHHHHHHhhCCCEE
Confidence 89999999999999997762 343332124456888988877653 2 2333346699999999988 6899999
Q ss_pred ecc
Q 029526 144 NVN 146 (192)
Q Consensus 144 Ni~ 146 (192)
...
T Consensus 205 H~s 207 (224)
T 2bdq_A 205 HGT 207 (224)
T ss_dssp EET
T ss_pred ccc
Confidence 853
No 236
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=84.11 E-value=3.2 Score=33.12 Aligned_cols=124 Identities=10% Similarity=0.037 Sum_probs=78.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
.+-++||+.|-+-..++|+.-.-...+++.+.+.++|+.+-+ ++.... ......+++.++.++-|+..
T Consensus 38 ~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~-----------~~~~~~~~~i~~A~~lGa~~ 105 (257)
T 3lmz_A 38 TLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYA-VGPIYM-----------KSEEEIDRAFDYAKRVGVKL 105 (257)
T ss_dssp HHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEE-EEEEEE-----------CSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEE-Eecccc-----------CCHHHHHHHHHHHHHhCCCE
Confidence 456889999999888776543344557788888899998763 221111 01233467778888899999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCC--C---CCHHHHHHHHhcC--CeEeecchHHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGAS--G---LSAELIKGCIERG--VRKFNVNTEVRK 151 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS--G---~~~e~~~~~i~~G--i~KINi~T~l~~ 151 (192)
+-+.-| .+.|+++.+..++.+|.|++|--. + .+.+++.+.++.. -.+++++|.-..
T Consensus 106 v~~~p~--------------~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~~~~p~vg~~~D~~h~~ 168 (257)
T 3lmz_A 106 IVGVPN--------------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKDLDPRIGMCLDVGHDL 168 (257)
T ss_dssp EEEEEC--------------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHTTSCTTEEEEEEHHHHH
T ss_pred EEecCC--------------HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHHhCCCCccEEEchhhHH
Confidence 886321 133444544444447999998663 2 3567777777632 256777765543
No 237
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=83.82 E-value=17 Score=31.76 Aligned_cols=74 Identities=12% Similarity=-0.001 Sum_probs=54.4
Q ss_pred CHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++ -+++++-. |.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.
T Consensus 225 ~~~~A~~~~~~L~~~~i~~iE~-------------P~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~~~d 287 (409)
T 3go2_A 225 KPEGYLKILRELADFDLFWVEI-------------DSYSPQGLAYVRNHS---PHPISS-CETLFGIREFKPFFDANAVD 287 (409)
T ss_dssp CHHHHHHHHHHTTTSCCSEEEC-------------CCSCHHHHHHHHHTC---SSCEEE-CTTCCHHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHhhcCCeEEEe-------------CcCCHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHhCCCC
Confidence 67899888665 57887762 334899999999887 699877 66767788999999887 66
Q ss_pred EeecchHHHHHHHHHh
Q 029526 142 KFNVNTEVRKAYMDSL 157 (192)
Q Consensus 142 KINi~T~l~~a~~~~~ 157 (192)
=||+.... -.++.++
T Consensus 288 ~v~~k~~~-GGit~~~ 302 (409)
T 3go2_A 288 VAIVDTIW-NGVWQSM 302 (409)
T ss_dssp EEEECHHH-HCHHHHH
T ss_pred EEEeCCCC-CCHHHHH
Confidence 67887643 3344443
No 238
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=83.77 E-value=20 Score=31.02 Aligned_cols=110 Identities=9% Similarity=0.034 Sum_probs=71.9
Q ss_pred cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hCCcEE
Q 029526 6 LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TDIDAL 82 (192)
Q Consensus 6 ~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---TgvD~L 82 (192)
.||+.+=+.-...++++.++..+.|.+..-. ++.+=.+ . ...+ ++++|.+|+++ .++.++
T Consensus 162 ~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~-~~~l~vD------a---------N~~~-~~~~A~~~~~~l~~~~i~~i 224 (381)
T 3fcp_A 162 GRHRAFKLKIGARELATDLRHTRAIVEALGD-RASIRVD------V---------NQAW-DAATGAKGCRELAAMGVDLI 224 (381)
T ss_dssp ---CEEEEECCSSCHHHHHHHHHHHHHHTCT-TCEEEEE------C---------TTCB-CHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEecCCCChHHHHHHHHHHHHHcCC-CCeEEEE------C---------CCCC-CHHHHHHHHHHHhhcCccce
Confidence 5899988887777788888777766554321 1221111 0 0123 58899998655 477766
Q ss_pred EEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 83 AVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 83 AvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
- ..-|.-|++-+++|++.+ ++|+++ |-|=.+..+++++++.| +.=||+..
T Consensus 225 E-----------eP~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~~~~~a~d~v~~k~ 275 (381)
T 3fcp_A 225 E-----------QPVSAHDNAALVRLSQQI---ETAILA-DEAVATAYDGYQLAQQGFTGAYALKI 275 (381)
T ss_dssp E-----------CCBCTTCHHHHHHHHHHS---SSEEEE-STTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred e-----------CCCCcccHHHHHHHHHhC---CCCEEE-CCCcCCHHHHHHHHHcCCCCEEEecc
Confidence 3 111334899999999887 699987 67777889999999876 66778754
No 239
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=83.77 E-value=6.5 Score=35.20 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=75.5
Q ss_pred hhhc-CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIVL-GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~~-GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++. ||+.+=+.....+.++.++..+.|-+.. + ++.+=.+ .+ .--++++|.+|+++..- .
T Consensus 202 ~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-~-~~~L~vD------aN----------~~w~~~~Ai~~~~~L~~-~ 262 (445)
T 3va8_A 202 IIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF-P-GVPLRLD------PN----------AAWTVETSKWVAKELEG-I 262 (445)
T ss_dssp HHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS-T-TCCEEEE------CT----------TCBCHHHHHHHHHHTTT-T
T ss_pred HHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC-C-CCcEeee------CC----------CCCCHHHHHHHHHHHhh-h
Confidence 3444 9999999887778888888877776665 2 3222111 11 12358899999877531 1
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
+ .|-. .|--|++-+++|++.+ ++|++. |-|=.+..+++++++.| +.=+|+.
T Consensus 263 --l-------~~iE-eP~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~div~~d 314 (445)
T 3va8_A 263 --V-------EYLE-DPAGEIEGMAAVAKEA---SMPLAT-NMAVVAFDHLPPSILQDAVQVILSD 314 (445)
T ss_dssp --C-------SEEE-SCBSHHHHHHHHHTTC---SSCEEE-SSSCCSGGGHHHHHHTTCCSEEEEC
T ss_pred --c-------CeEe-ecCcCHHHHHHHHHcC---CCCEEe-CCccCCHHHHHHHHHcCCCCEEEec
Confidence 1 1222 4655888888998877 699987 67777888999999887 5557775
No 240
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=83.75 E-value=20 Score=30.63 Aligned_cols=115 Identities=18% Similarity=0.209 Sum_probs=74.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.+=+.-..- .++.++..+.|.+..-+ ++.+=.+. + ..+ ++++|.+|+++ .+
T Consensus 149 ~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a~g~-~~~l~vDa------n---------~~~-~~~~a~~~~~~L~~~~ 210 (354)
T 3jva_A 149 EKVKLGFDTLKIKVGTG-IEADIARVKAIREAVGF-DIKLRLDA------N---------QAW-TPKDAVKAIQALADYQ 210 (354)
T ss_dssp HHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCT-TSEEEEEC------T---------TCS-CHHHHHHHHHHTTTSC
T ss_pred HHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHHcCC-CCeEEEEC------C---------CCC-CHHHHHHHHHHHHhcC
Confidence 35678999988776543 47777777766654421 22222110 0 123 68899988765 46
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
++++- -+ -|.-|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.=||+....
T Consensus 211 i~~iE---------qP--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 267 (354)
T 3jva_A 211 IELVE---------QP--VKRRDLEGLKYVTSQV---NTTIMA-DESCFDAQDALELVKKGTVDVINIKLMK 267 (354)
T ss_dssp EEEEE---------CC--SCTTCHHHHHHHHHHC---SSEEEE-STTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCEEE---------CC--CChhhHHHHHHHHHhC---CCCEEE-cCCcCCHHHHHHHHHcCCCCEEEECchh
Confidence 67664 11 1334889999999887 699887 45566778899999875 6778887443
No 241
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=83.67 E-value=2.2 Score=37.48 Aligned_cols=79 Identities=20% Similarity=0.270 Sum_probs=55.9
Q ss_pred HHHHHhhhhCCcEEEEecCcC-------------CCCCCCCCC--CCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHH
Q 029526 69 QAEEFIDETDIDALAVCIGNV-------------HGKYPSSGP--NLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIK 133 (192)
Q Consensus 69 ea~~Fv~~TgvD~LAvaiGt~-------------HG~y~~~~p--~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~ 133 (192)
+..+-+++.|+|.|.+.-.|. .|.|++ .| .+.++.+.+|++.+.. ++|++.=||-..+ ++..
T Consensus 238 ~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG-~~i~p~a~~~v~~i~~~v~~-~ipvI~~GGI~s~-~da~ 314 (367)
T 3zwt_A 238 DIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSG-KPLRDLSTQTIREMYALTQG-RVPIIGVGGVSSG-QDAL 314 (367)
T ss_dssp HHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEE-GGGHHHHHHHHHHHHHHTTT-CSCEEEESSCCSH-HHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCC-cccchhHHHHHHHHHHHcCC-CceEEEECCCCCH-HHHH
Confidence 344445689999999864442 234432 11 2356888888888731 4999999987655 5688
Q ss_pred HHHhcCCeEeecchHHH
Q 029526 134 GCIERGVRKFNVNTEVR 150 (192)
Q Consensus 134 ~~i~~Gi~KINi~T~l~ 150 (192)
+++..|..=|-++|.+.
T Consensus 315 ~~l~~GAd~V~vgra~l 331 (367)
T 3zwt_A 315 EKIRAGASLVQLYTALT 331 (367)
T ss_dssp HHHHHTCSEEEESHHHH
T ss_pred HHHHcCCCEEEECHHHH
Confidence 88899999999999985
No 242
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=83.67 E-value=15 Score=32.09 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=72.2
Q ss_pred hhhhcCCCEeEeeCC--------CCC----HHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHH
Q 029526 2 EAIVLGFDSLMVDGS--------HLP----FKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQ 69 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S--------~l~----~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pee 69 (192)
++++.||+.+=+.-. ..+ +++.++..+.|.+..-. ++.+=.+ .+ ..+ ++++
T Consensus 161 ~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~-d~~l~vD---------an------~~~-~~~~ 223 (404)
T 4e5t_A 161 KAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGT-KADLLFG---------TH------GQF-TVSG 223 (404)
T ss_dssp HHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGG-GSEEEEC---------CC------SCB-CHHH
T ss_pred HHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCC-CCeEEEe---------CC------CCc-CHHH
Confidence 456789999988632 123 45556555555554421 2222211 10 123 5789
Q ss_pred HHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeec
Q 029526 70 AEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNV 145 (192)
Q Consensus 70 a~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi 145 (192)
|.+|++ +.|++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+
T Consensus 224 A~~~~~~l~~~~i~~iEe---------P--~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~v~~ 288 (404)
T 4e5t_A 224 AKRLARRLEAYDPLWFEE---------P--IPPEKPEDMAEVARYT---SIPVAT-GERLCTKYEFSRVLETGAASILQM 288 (404)
T ss_dssp HHHHHHHHGGGCCSEEEC---------C--SCTTCHHHHHHHHHHC---SSCEEE-CTTCCHHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHHhhcCCcEEEC---------C--CCcccHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHhCCCCEEec
Confidence 988855 468888851 1 1334899999999988 699876 56667788999999887 666777
Q ss_pred c
Q 029526 146 N 146 (192)
Q Consensus 146 ~ 146 (192)
.
T Consensus 289 d 289 (404)
T 4e5t_A 289 N 289 (404)
T ss_dssp C
T ss_pred C
Confidence 5
No 243
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=83.59 E-value=1.1 Score=39.15 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=58.1
Q ss_pred CCHHHHHHHhh---hhC-CcEEEEecC-------------------cCCCCCCCCCC--CCCHHHHHHHHhhhccCCccE
Q 029526 65 TDVNQAEEFID---ETD-IDALAVCIG-------------------NVHGKYPSSGP--NLKLDLLKDLHALSSKKGVLL 119 (192)
Q Consensus 65 T~peea~~Fv~---~Tg-vD~LAvaiG-------------------t~HG~y~~~~p--~ld~~~L~~I~~~~~~~~iPL 119 (192)
.|.++..++++ +.| +|.|.+.-- +..|.|++ .| .++++.+.+|++... ++|+
T Consensus 204 ~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG-~~i~p~a~~~i~~v~~~~~--~ipI 280 (354)
T 4ef8_A 204 FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGG-RYVLPTALANINAFYRRCP--GKLI 280 (354)
T ss_dssp CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEG-GGGHHHHHHHHHHHHHHCT--TSEE
T ss_pred CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCC-CCCchHHHHHHHHHHHhCC--CCCE
Confidence 35666666665 777 999875321 22344543 12 367888888888742 5999
Q ss_pred EeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 120 VLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 120 VlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+-=||--.+ ++..+++..|..-|-++|.+..
T Consensus 281 I~~GGI~s~-~da~~~l~aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 281 FGCGGVYTG-EDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp EEESCCCSH-HHHHHHHHHTEEEEEECHHHHH
T ss_pred EEECCcCCH-HHHHHHHHcCCCEEEEhHHHHH
Confidence 999986655 5577888999999999999863
No 244
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=83.52 E-value=1.6 Score=38.10 Aligned_cols=122 Identities=13% Similarity=0.168 Sum_probs=75.0
Q ss_pred ccCCCHHHHHHHhh--------------hhCCcEEEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccC----CccEEee
Q 029526 62 AKLTDVNQAEEFID--------------ETDIDALAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKK----GVLLVLH 122 (192)
Q Consensus 62 ~~~T~peea~~Fv~--------------~TgvD~LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~----~iPLVlH 122 (192)
.+|++||...++++ +.|+|.+-+.- +.=|..++. --++=+.-+++|-+.++.. ++|+.+|
T Consensus 180 ~~~~~Pe~~~~ll~~i~~~~~~y~~~qi~aGad~i~ifD-s~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f 258 (368)
T 4exq_A 180 MAYARPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFD-TWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAF 258 (368)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE-TTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEE
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC-CccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 46789988887765 46999876543 221333321 0012333456777766542 3898888
Q ss_pred cCCCCCHHHHHHHHhcCCeEeecch--HHHHHHHHHhcC-----CCCChHHHHHHHHHHHHHHHHHHHHHhCC
Q 029526 123 GASGLSAELIKGCIERGVRKFNVNT--EVRKAYMDSLSR-----PKSDLIHLMASAKEAMKAVVAEKMRLFGS 188 (192)
Q Consensus 123 GgSG~~~e~~~~~i~~Gi~KINi~T--~l~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~i~~~gs 188 (192)
++- . ...+....++|+.-+|++. ++..+-. .+.. .+.||.. +-...+.+++.+++.|+.+|.
T Consensus 259 ~~g-~-~~~l~~l~~~g~d~i~~d~~~dl~~ak~-~~g~~~~l~Gnldp~~-L~gt~e~I~~~v~~~l~~~g~ 327 (368)
T 4exq_A 259 TKG-G-GLWLEDLAATGVDAVGLDWTVNLGRARE-RVAGRVALQGNLDPTI-LFAPPEAIRAEARAVLDSYGN 327 (368)
T ss_dssp ETT-C-GGGHHHHHTSSCSEEECCTTSCHHHHHH-HHTTSSEEEEEECGGG-GGSCHHHHHHHHHHHHHHHCS
T ss_pred cCC-c-HHHHHHHHHhCCCEEeeCCCCCHHHHHH-HhCCCEEEEECCCHHH-hCCCHHHHHHHHHHHHHHhCC
Confidence 763 3 3556777889999988864 4443321 2221 1336653 345678999999999999875
No 245
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=83.50 E-value=7 Score=33.91 Aligned_cols=112 Identities=13% Similarity=0.150 Sum_probs=69.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh---C
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---D 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---g 78 (192)
++++.||+.+=+.-.. +.++.++..+.|.+..- -++.+=.+ . ...+ ++++|.+|+++. +
T Consensus 155 ~~~~~G~~~iKiK~G~-~~~~d~~~v~avR~a~g-~~~~l~vD------a---------n~~~-~~~~a~~~~~~l~~~~ 216 (378)
T 3eez_A 155 RYRQRGYVAHSVKIGG-DVERDIARIRDVEDIRE-PGEIVLYD------V---------NRGW-TRQQALRVMRATEDLH 216 (378)
T ss_dssp HHHHTTCCEEEEECCS-CHHHHHHHHHHHTTSCC-TTCEEEEE------C---------TTCC-CHHHHHHHHHHTGGGT
T ss_pred HHHhCCCCEEEeccCC-CHHHHHHHHHHHHHHcC-CCceEEEE------C---------CCCC-CHHHHHHHHHHhccCC
Confidence 3456788888776554 55666655444432211 02222111 0 0123 588999987653 4
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
+ ++- .|--|++-++++++.+ ++|++. |.|=.+.++++++++.| +.=||+....
T Consensus 217 i-~iE-------------qP~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 217 V-MFE-------------QPGETLDDIAAIRPLH---SAPVSV-DECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp C-CEE-------------CCSSSHHHHHHTGGGC---CCCEEE-CTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred e-EEe-------------cCCCCHHHHHHHHhhC---CCCEEE-CCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 4 431 2433899899998877 699887 66667788899999887 7778886544
No 246
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=83.37 E-value=2.6 Score=34.66 Aligned_cols=112 Identities=16% Similarity=0.152 Sum_probs=76.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|+++|-+-|+-.+ .+.+++++|+++|+. |+- .+. .-.-..+|.|+.+- .+-|+|.
T Consensus 80 ~ai~AGA~fivsP~----------~~~evi~~~~~~~v~-----~~~----~~~----~~PG~~TptE~~~A-~~~Gad~ 135 (217)
T 3lab_A 80 KAIDAGAQFIVSPG----------LTPELIEKAKQVKLD-----GQW----QGV----FLPGVATASEVMIA-AQAGITQ 135 (217)
T ss_dssp HHHHHTCSEEEESS----------CCHHHHHHHHHHHHH-----CSC----CCE----EEEEECSHHHHHHH-HHTTCCE
T ss_pred HHHHcCCCEEEeCC----------CcHHHHHHHHHcCCC-----ccC----CCe----EeCCCCCHHHHHHH-HHcCCCE
Confidence 68889988888765 256889999987651 100 000 00013688898884 5889999
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
|-+ |+. .+--.++.|+.|+.... ++|++==| |++.++++...+.|..-+=.+|.+.
T Consensus 136 vK~--------FPa-~~~gG~~~lkal~~p~p--~i~~~ptG--GI~~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 136 LKC--------FPA-SAIGGAKLLKAWSGPFP--DIQFCPTG--GISKDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp EEE--------TTT-TTTTHHHHHHHHHTTCT--TCEEEEBS--SCCTTTHHHHHHSTTBCCEEESGGG
T ss_pred EEE--------Ccc-ccccCHHHHHHHHhhhc--CceEEEeC--CCCHHHHHHHHHCCCEEEEEChhhc
Confidence 954 443 12114788999988763 58999888 5557889999999976665566664
No 247
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=83.13 E-value=15 Score=32.78 Aligned_cols=111 Identities=10% Similarity=0.156 Sum_probs=75.6
Q ss_pred hhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++ .||+.+=+.....+.++.++..+.|-+.. + ++.+=.+ . +.--++++|.+|+++..- .
T Consensus 204 ~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-~-d~~L~vD------a----------N~~w~~~~Ai~~~~~L~~-~ 264 (445)
T 3vdg_A 204 MIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAF-P-DHPLRLD------P----------NAAWTPQTSVKVAAGLEG-V 264 (445)
T ss_dssp HHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHC-T-TSCEEEE------C----------TTCSCHHHHHHHHHHTTT-T
T ss_pred HHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhC-C-CCcEEEE------C----------CCCCCHHHHHHHHHHHhh-H
Confidence 345 39999988877778888888777776655 2 3322111 1 112368899999876531 1
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
+ .|-. .|--|++-+++|++.+ ++|++. |-|=.+..+++++++.| +.=+|+.
T Consensus 265 --l-------~~iE-eP~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~a~div~~d 316 (445)
T 3vdg_A 265 --L-------EYLE-DPTPGLDGMAEVAAQA---PMPLAT-NMCVVAFDQLPAAVAKNSVQVVLSD 316 (445)
T ss_dssp --C-------SEEE-CCSSSHHHHHHHHHHC---SSCEEE-SSSCCSGGGHHHHHHHTCCSEEEEC
T ss_pred --H-------Heee-CCCCCHHHHHHHHhcC---CCCEEc-CCcCCCHHHHHHHHHcCCCCEEeeC
Confidence 1 1222 3555899999999887 699987 77778888999999887 5557774
No 248
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=83.09 E-value=5.3 Score=31.93 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=45.9
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCcc---EEeecCCC----CCHHH------
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVL---LVLHGASG----LSAEL------ 131 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iP---LVlHGgSG----~~~e~------ 131 (192)
.+++++.+++.+.|.|.+-+...+.|. |. .+.++.+.++++++..++.++. +++|+... .|+++
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~ 88 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQ-WR--AAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSR 88 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSC-SS--CCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCc-Cc--CCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHH
Confidence 567778888888888877774333332 22 1445556666666666555665 67776432 12221
Q ss_pred ------HHHHHhcCCeEeecc
Q 029526 132 ------IKGCIERGVRKFNVN 146 (192)
Q Consensus 132 ------~~~~i~~Gi~KINi~ 146 (192)
++.|..+|+..|++.
T Consensus 89 ~~~~~~i~~A~~lGa~~v~~~ 109 (285)
T 1qtw_A 89 DAFIDEMQRCEQLGLSLLNFH 109 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEC
Confidence 333556777777764
No 249
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=83.01 E-value=4.4 Score=32.44 Aligned_cols=78 Identities=10% Similarity=0.135 Sum_probs=48.0
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCcc---EEeecCCC----CCHH--------
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVL---LVLHGASG----LSAE-------- 130 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iP---LVlHGgSG----~~~e-------- 130 (192)
+++++.+++.+.|.|.+-+..++-|. |. .+.++.+.++++++..++.++. +..|+... .|++
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~ 89 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARS-WS--AKLPSDEAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVE 89 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSS-SC--CCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCccc-cc--ccCCCHHHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHH
Confidence 67788888888888888876554332 22 2455666667777766555665 77787531 1221
Q ss_pred ----HHHHHHhcCCeEeecc
Q 029526 131 ----LIKGCIERGVRKFNVN 146 (192)
Q Consensus 131 ----~~~~~i~~Gi~KINi~ 146 (192)
.++.|..+|+..|++.
T Consensus 90 ~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 90 LLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp HHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 2333556788777764
No 250
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=82.94 E-value=10 Score=32.47 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=76.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
++++.||+.+=+.-.. +.++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|++ +.+
T Consensus 150 ~~~~~G~~~~K~K~G~-~~~~d~~~v~avR~~~g~-~~~l~vD------an---------~~~-~~~~a~~~~~~l~~~~ 211 (356)
T 3ro6_B 150 EHLALGFRVLKVKLCG-DEEQDFERLRRLHETLAG-RAVVRVD------PN---------QSY-DRDGLLRLDRLVQELG 211 (356)
T ss_dssp HHHHTTCCEEEEECCS-CHHHHHHHHHHHHHHHTT-SSEEEEE------CT---------TCC-CHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEEeCC-CHHHHHHHHHHHHHHhCC-CCEEEEe------CC---------CCC-CHHHHHHHHHHHHhcC
Confidence 3567899998887543 677888877777665422 2222221 01 123 5788988865 458
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC--CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG--VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G--i~KINi~T~l 149 (192)
++++- -+ -|.-|++-+++|++.+ ++|++.- .|=.+.++++++++.| +.=||+....
T Consensus 212 i~~iE---------qP--~~~~d~~~~~~l~~~~---~iPIa~d-E~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 212 IEFIE---------QP--FPAGRTDWLRALPKAI---RRRIAAD-ESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp CCCEE---------CC--SCTTCHHHHHTSCHHH---HHTEEES-TTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred CCEEE---------CC--CCCCcHHHHHHHHhcC---CCCEEeC-CcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 88774 11 1233888889888887 5998875 5666788899999876 7778886543
No 251
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=82.90 E-value=9.8 Score=26.66 Aligned_cols=69 Identities=19% Similarity=0.150 Sum_probs=49.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++..+|.+-+-+. .|..| +++++.|++......+|+++-.+.+ ..+...++.+.|+.-
T Consensus 34 ~~~~~~al~~~~~~~~dlvl~D~~---------lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~-~~~~~~~~~~~ga~~ 103 (136)
T 3t6k_A 34 AASGEEALQQIYKNLPDALICDVL---------LPGIDGYTLCKRVRQHPLTKTLPILMLTAQG-DISAKIAGFEAGAND 103 (136)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESC---------CSSSCHHHHHHHHHHSGGGTTCCEEEEECTT-CHHHHHHHHHHTCSE
T ss_pred eCCHHHHHHHHHhCCCCEEEEeCC---------CCCCCHHHHHHHHHcCCCcCCccEEEEecCC-CHHHHHHHHhcCcce
Confidence 467889999999999999888752 13333 7888999874222368999887765 445577888888654
No 252
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=82.87 E-value=1.6 Score=39.39 Aligned_cols=80 Identities=13% Similarity=0.173 Sum_probs=56.1
Q ss_pred HHHHHhhhhCCcEEEEecCcCC-----------CCCCCCCC--CCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 69 QAEEFIDETDIDALAVCIGNVH-----------GKYPSSGP--NLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 69 ea~~Fv~~TgvD~LAvaiGt~H-----------G~y~~~~p--~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
+..+-+++.|+|.|.++-+|.- |.|++ .| .+.++.+.+|++.+.. ++|++-=||--.++ +..++
T Consensus 315 ~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG-~~~~~~sl~~i~~v~~~v~~-~iPVIg~GGI~s~~-DA~e~ 391 (443)
T 1tv5_A 315 EIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSG-AKLKDISTKFICEMYNYTNK-QIPIIASGGIFSGL-DALEK 391 (443)
T ss_dssp HHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEE-HHHHHHHHHHHHHHHHHTTT-CSCEEEESSCCSHH-HHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCcccccccccccccCCcCC-CcchHHHHHHHHHHHHHcCC-CCcEEEECCCCCHH-HHHHH
Confidence 3444567889999999877642 23322 11 1235778888887721 49999999876555 57788
Q ss_pred HhcCCeEeecchHHHH
Q 029526 136 IERGVRKFNVNTEVRK 151 (192)
Q Consensus 136 i~~Gi~KINi~T~l~~ 151 (192)
+..|..=|-++|.+..
T Consensus 392 l~aGAd~Vqigrall~ 407 (443)
T 1tv5_A 392 IEAGASVCQLYSCLVF 407 (443)
T ss_dssp HHTTEEEEEESHHHHH
T ss_pred HHcCCCEEEEcHHHHh
Confidence 8999999999999763
No 253
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=82.75 E-value=15 Score=32.70 Aligned_cols=112 Identities=15% Similarity=0.200 Sum_probs=76.0
Q ss_pred hhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++ .||+.+=+..-..+.++.++..+.|-+.. + ++.+=.+ . +.--++++|.+|+++.. +.
T Consensus 199 ~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~-p-d~~L~vD------a----------N~~w~~~~Ai~~~~~L~-~~ 259 (441)
T 3vc5_A 199 LIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAF-P-GLPLRLD------P----------NAAWTVETSIRVGRALD-GV 259 (441)
T ss_dssp HHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHS-T-TCCEEEE------C----------TTCSCHHHHHHHHHHTT-TT
T ss_pred HHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC-C-CCcEecc------C----------CCCCCHHHHHHHHHHHH-HH
Confidence 344 49999988877778888888777776655 2 3222111 1 11235889999987753 11
Q ss_pred EEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+. |-. .|--|++-+++|++.+ ++|++. |-|=.+..+++++++.| +.=+|+..
T Consensus 260 --l~-------~iE-eP~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~a~dii~~d~ 312 (441)
T 3vc5_A 260 --LE-------YLE-DPTPGIDGMARVAAEV---PMPLAT-NMCVVTPEHLPAAVERRPIGVLLIDH 312 (441)
T ss_dssp --CS-------EEE-CCSSSHHHHHHHHTTS---SSCEEE-SSSCCSGGGHHHHHHHCCCSEEEECH
T ss_pred --HH-------Hhh-ccCCCHHHHHHHHhcC---CCCEEe-CCCCCCHHHHHHHHHhCCCCEEeech
Confidence 11 222 4656899999999887 699987 77778888999999877 55567753
No 254
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=82.75 E-value=2.6 Score=32.52 Aligned_cols=72 Identities=21% Similarity=0.335 Sum_probs=52.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++.++|.+=+-+- .|..+ ++++++|++.....++|+++-++. .+...++.+.|+..
T Consensus 11 ~~~~~~a~~~~~~~~~dlvl~D~~---------~p~~~g~~~~~~l~~~~~~~~i~vi~~~~~---~~~~~~~~~~Ga~~ 78 (237)
T 3cwo_X 11 ATNGREAVEKYKELKPDIVTMDIT---------MPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ---QAMVIEAIKAGAKD 78 (237)
T ss_dssp CCSSSTTHHHHHHHCCSCEEEECC---------STTSSHHHHHHHHHHHSSSCCEEEECCSST---HHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHhcCCCEEEEeCC---------CCCCCHHHHHHHHHHhCCCCCEEEEECCCC---HHHHHHHHHCCHHh
Confidence 467788999999999996655541 12222 788899887654446888876554 78899999999988
Q ss_pred eecch
Q 029526 143 FNVNT 147 (192)
Q Consensus 143 INi~T 147 (192)
+=+.+
T Consensus 79 ~l~kp 83 (237)
T 3cwo_X 79 FIVNT 83 (237)
T ss_dssp EEESH
T ss_pred eEeCC
Confidence 76543
No 255
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=82.73 E-value=17 Score=29.12 Aligned_cols=146 Identities=14% Similarity=0.144 Sum_probs=79.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCC-ccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGL-TVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~-~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.+-++||+.|=+....+|.- .-...+++.+.+.++|+.+-+-.+.....+-.. .....+......+++.++.++-|+.
T Consensus 25 ~~~~~G~~~vEl~~~~~~~~-~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~ 103 (294)
T 3vni_A 25 KVAKLGFDILEIAASPLPFY-SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVH 103 (294)
T ss_dssp HHHHHTCSEEEEESTTGGGC-CHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHcCCCEEEecCcccCCc-CHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45678999999887665321 123456788889999999987322211100000 0000011223334567777788999
Q ss_pred EEEEecCcCCCCCCCC-CCCCC--------HHHHHHHHhhhccCCccEEeecCC------CCCHHHHHHHHh---cCCeE
Q 029526 81 ALAVCIGNVHGKYPSS-GPNLK--------LDLLKDLHALSSKKGVLLVLHGAS------GLSAELIKGCIE---RGVRK 142 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~-~p~ld--------~~~L~~I~~~~~~~~iPLVlHGgS------G~~~e~~~~~i~---~Gi~K 142 (192)
.+-+. .|+.++.. .+..+ .+.|+++.+...+.+|.|++|=-. ..+.+++.+.++ .--.+
T Consensus 104 ~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~vg 180 (294)
T 3vni_A 104 LIGGA---LYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQVDHNNVK 180 (294)
T ss_dssp EEEES---TTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHHCCTTEE
T ss_pred eeecc---ccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCEE
Confidence 88643 35433200 01122 234455555554558999999432 234555555543 23578
Q ss_pred eecchHHHH
Q 029526 143 FNVNTEVRK 151 (192)
Q Consensus 143 INi~T~l~~ 151 (192)
++++|.-..
T Consensus 181 ~~~D~~h~~ 189 (294)
T 3vni_A 181 VMLDTFHMN 189 (294)
T ss_dssp EEEEHHHHH
T ss_pred EEEEhhhhH
Confidence 888876543
No 256
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=82.66 E-value=14 Score=32.48 Aligned_cols=115 Identities=13% Similarity=0.081 Sum_probs=70.7
Q ss_pred hhhhcCCCEeEeeCCC----CCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccccccccCCCHHHHHHHh
Q 029526 2 EAIVLGFDSLMVDGSH----LPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFI 74 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~----l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv 74 (192)
++++.||+.+=+-|.. ++..++++...++++..++. ++.+=.+ .+ ..+ ++++|.+|+
T Consensus 135 ~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vD------aN---------~~~-~~~~A~~~~ 198 (405)
T 3rr1_A 135 ALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLD------FH---------GRV-SAPMAKVLI 198 (405)
T ss_dssp HHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEE------CC---------SCB-CHHHHHHHH
T ss_pred HHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEE------CC---------CCC-CHHHHHHHH
Confidence 4567899999886653 12233444444444444431 2222111 01 123 578888885
Q ss_pred h---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 75 D---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 75 ~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+ +-|++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+..
T Consensus 199 ~~L~~~~i~~iEe----------P-~~~~d~~~~~~l~~~~---~iPIa~-dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 199 KELEPYRPLFIEE----------P-VLAEQAETYARLAAHT---HLPIAA-GERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp HHHGGGCCSCEEC----------S-SCCSSTHHHHHHHTTC---SSCEEE-CTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred HHHHhcCCCEEEC----------C-CCcccHHHHHHHHhcC---CCCEEe-cCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 5 457777741 1 1334889999999887 699876 55566788899999876 66677754
No 257
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=82.59 E-value=23 Score=30.50 Aligned_cols=114 Identities=17% Similarity=0.183 Sum_probs=75.3
Q ss_pred hhhhc-CCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---h
Q 029526 2 EAIVL-GFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---T 77 (192)
Q Consensus 2 ~ai~~-GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---T 77 (192)
++++. ||+.+=+.-...+.++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|+++ .
T Consensus 161 ~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~-~~~l~vD------an---------~~~-~~~~a~~~~~~l~~~ 223 (372)
T 3tj4_A 161 RAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDS-AVRIAID------GN---------GKW-DLPTCQRFCAAAKDL 223 (372)
T ss_dssp HHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCT-TCEEEEE------CT---------TCC-CHHHHHHHHHHTTTS
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCC-CCcEEee------CC---------CCC-CHHHHHHHHHHHhhc
Confidence 35667 999988887766778877777766654421 2222111 01 124 48899888765 4
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+++++-= + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+..
T Consensus 224 ~i~~iEq---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~~~d~v~~k~ 279 (372)
T 3tj4_A 224 DIYWFEE---------P--LWYDDVTSHARLARNT---SIPIAL-GEQLYTVDAFRSFIDAGAVAYVQPDV 279 (372)
T ss_dssp CEEEEES---------C--SCTTCHHHHHHHHHHC---SSCEEE-CTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred CCCEEEC---------C--CCchhHHHHHHHHhhc---CCCEEe-CCCccCHHHHHHHHHcCCCCEEEeCc
Confidence 6666631 1 2334889999999887 699875 55667788999999887 66677754
No 258
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=82.53 E-value=5.5 Score=37.75 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCe-EEEeccccccCCCCCccccccccCCCHHHHHHHhhh------hCCcE-EEEecCc
Q 029526 17 HLPFKDNISHTKYISFLAHSKGML-VEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE------TDIDA-LAVCIGN 88 (192)
Q Consensus 17 ~l~~eeNi~~Tk~vv~~Ah~~gv~-VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~------TgvD~-LAvaiGt 88 (192)
..+.+||++...+.+++|+.++-. ++..+|.--+.|| ..-|+|+-+.++++. .|+|. .-+.+.-
T Consensus 182 ~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Ed--------asrtd~dfl~ev~~aa~eaG~~Gad~~~~I~LpD 253 (644)
T 3hq1_A 182 RANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPES--------YTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPA 253 (644)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEET--------GGGSCHHHHHHHHHHHHHHHCCCSSSCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcc--------cCCCCHHHHHHHHHHHHHhcCCCCCceeEEEecC
Confidence 457899999999999888765311 0011111111122 234899988887764 36772 2334444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHhhhcc-CCccEEeec--CCCCCHHHHHHHHhcCCeEee
Q 029526 89 VHGKYPSSGPNLKLDLLKDLHALSSK-KGVLLVLHG--ASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 89 ~HG~y~~~~p~ld~~~L~~I~~~~~~-~~iPLVlHG--gSG~~~e~~~~~i~~Gi~KIN 144 (192)
.=|.- .|.-=.++++.+++.+.. .++||-+|. ..|+.-...-.|+..|+..|+
T Consensus 254 TvG~~---tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vd 309 (644)
T 3hq1_A 254 TVEMT---TPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIE 309 (644)
T ss_dssp SSCCS---CHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCccc---CHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEE
Confidence 43332 254344667777776532 137787777 889999999999999999885
No 259
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=82.52 E-value=2.5 Score=36.01 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=39.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|+++|-+-||+|-- + .+ .+|++++..+. .+.+|+ +|| -+++.+.+|. +||||.
T Consensus 211 eA~~aGaD~I~ld~~--~-~~---~~k~av~~v~~-~ipi~A----sGG--------------It~eni~~~a-~tGvD~ 264 (286)
T 1x1o_A 211 EALEAGADLILLDNF--P-LE---ALREAVRRVGG-RVPLEA----SGN--------------MTLERAKAAA-EAGVDY 264 (286)
T ss_dssp HHHHHTCSEEEEESC--C-HH---HHHHHHHHHTT-SSCEEE----ESS--------------CCHHHHHHHH-HHTCSE
T ss_pred HHHHcCCCEEEECCC--C-HH---HHHHHHHHhCC-CCeEEE----EcC--------------CCHHHHHHHH-HcCCCE
Confidence 688999999999983 2 23 35566666543 467766 222 2357777765 899999
Q ss_pred EEE
Q 029526 82 LAV 84 (192)
Q Consensus 82 LAv 84 (192)
++|
T Consensus 265 IsV 267 (286)
T 1x1o_A 265 VSV 267 (286)
T ss_dssp EEC
T ss_pred EEE
Confidence 987
No 260
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=82.52 E-value=15 Score=31.95 Aligned_cols=68 Identities=22% Similarity=0.123 Sum_probs=49.6
Q ss_pred CHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++ .|++++-- + -|.-|++-+++|++.+ ++|++. |.|=...++++++++.| +.
T Consensus 213 ~~~~A~~~~~~L~~~~i~~iEq----------P-~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~~~d 277 (401)
T 3sbf_A 213 FPNQAIQFAKEVEQYKPYFIED----------I-LPPNQTEWLDNIRSQS---SVSLGL-GELFNNPEEWKSLIANRRID 277 (401)
T ss_dssp CHHHHHHHHHHHGGGCCSCEEC----------S-SCTTCGGGHHHHHTTC---CCCEEE-CTTCCSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEEC----------C-CChhHHHHHHHHHhhC---CCCEEe-CCccCCHHHHHHHHhcCCCC
Confidence 58899998654 57777741 1 1334788899999887 699776 66667788999999887 66
Q ss_pred EeecchH
Q 029526 142 KFNVNTE 148 (192)
Q Consensus 142 KINi~T~ 148 (192)
=||+...
T Consensus 278 ~v~~k~~ 284 (401)
T 3sbf_A 278 FIRCHVS 284 (401)
T ss_dssp EECCCGG
T ss_pred EEecCcc
Confidence 6777643
No 261
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=82.47 E-value=3.3 Score=32.95 Aligned_cols=77 Identities=13% Similarity=0.223 Sum_probs=46.7
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEee
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KIN 144 (192)
.+..++.+.+.+.|+|++=+-+ .-|.|-++ ...-++.+++|++.+ +.|+.+|--.--|++.++.+.+.|+.=|.
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~--~dg~f~~~-~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~~~v~~~~~~Gad~v~ 96 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDV--MDGRFVPN-ITIGPLVVDSLRPIT---DLPLDVHLMIVEPDQRVPDFIKAGADIVS 96 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEE--EBSSSSSC-BCCCHHHHHHHGGGC---CSCEEEEEESSSHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEee--ccCCcccc-cccCHHHHHHHHhcc---CCcEEEEEEecCHHHHHHHHHHcCCCEEE
Confidence 4555666677777888766544 44544321 223467777777665 46777766554455567777777777665
Q ss_pred cch
Q 029526 145 VNT 147 (192)
Q Consensus 145 i~T 147 (192)
+.-
T Consensus 97 vh~ 99 (230)
T 1rpx_A 97 VHC 99 (230)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 262
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=82.44 E-value=8.8 Score=32.68 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=50.1
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEee----cCCCCCHHHHHHHHhcCCeEe
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLH----GASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlH----GgSG~~~e~~~~~i~~Gi~KI 143 (192)
+.|+.|. +-|+|++-+ ||. | +.+.+++|.+.+ ++|++.- |.|. .-..++.-++|++-|
T Consensus 171 ~ra~ay~-eAGAd~i~~-----e~~-----~--~~~~~~~i~~~~---~iP~~~N~~~~g~~p--~~~~~eL~~~G~~~v 232 (295)
T 1xg4_A 171 ERAQAYV-EAGAEMLFP-----EAI-----T--ELAMYRQFADAV---QVPILANITEFGATP--LFTTDELRSAHVAMA 232 (295)
T ss_dssp HHHHHHH-HTTCSEEEE-----TTC-----C--SHHHHHHHHHHH---CSCBEEECCSSSSSC--CCCHHHHHHTTCSEE
T ss_pred HHHHHHH-HcCCCEEEE-----eCC-----C--CHHHHHHHHHHc---CCCEEEEecccCCCC--CCCHHHHHHcCCCEE
Confidence 3444443 679999876 332 2 678888898888 6998532 3333 233566778899999
Q ss_pred ecchHHHHHHHHHhc
Q 029526 144 NVNTEVRKAYMDSLS 158 (192)
Q Consensus 144 Ni~T~l~~a~~~~~~ 158 (192)
=++..+..+.+.+++
T Consensus 233 ~~~~~~~~aa~~a~~ 247 (295)
T 1xg4_A 233 LYPLSAFRAMNRAAE 247 (295)
T ss_dssp EESSHHHHHHHHHHH
T ss_pred EEChHHHHHHHHHHH
Confidence 999988877777654
No 263
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=82.30 E-value=4.6 Score=36.02 Aligned_cols=137 Identities=14% Similarity=0.124 Sum_probs=80.3
Q ss_pred hhhhcCCCEeEeeCCC-------C-------------CHHHHHHHHHHHHHHHHhC-CC-eEEEeccccccCCCCCcccc
Q 029526 2 EAIVLGFDSLMVDGSH-------L-------------PFKDNISHTKYISFLAHSK-GM-LVEAELGRLSGTEDGLTVED 59 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~-------l-------------~~eeNi~~Tk~vv~~Ah~~-gv-~VEaElG~i~g~e~~~~~~~ 59 (192)
+|.++||+-|-|-+.+ | ++|.-.+...+|++-.++. |- .|-. ++...+. ..
T Consensus 176 ~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~---r~~~~~~-~~--- 248 (407)
T 3tjl_A 176 KAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGI---RISPWAT-FQ--- 248 (407)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEE---EECTTCC-GG---
T ss_pred HHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEE---EECcccc-cC---
Confidence 6899999999999887 1 4788888888888887652 21 1211 2221111 10
Q ss_pred ccccCC-C----HHHHHHHh------hhhC--CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCC
Q 029526 60 YEAKLT-D----VNQAEEFI------DETD--IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASG 126 (192)
Q Consensus 60 ~~~~~T-~----peea~~Fv------~~Tg--vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG 126 (192)
..... + .++...++ ++.| +|+|.++-|...+.+.. .|..+.+.++.+++.. ++|++.=|+--
T Consensus 249 -g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~-~~~~~~~~~~~ir~~~---~~PvI~~Ggi~ 323 (407)
T 3tjl_A 249 -NMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDV-SEEDQAGDNEFVSKIW---KGVILKAGNYS 323 (407)
T ss_dssp -GCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEEC-CGGGCCCCSHHHHHHC---CSEEEEESCGG
T ss_pred -CCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcC-CccchhHHHHHHHHHh---CCCEEecCCCC
Confidence 00011 2 33444444 4448 99999997766554332 2332334466777777 58999988644
Q ss_pred CCHH---HHHHHHhcCCeEeecchHHH
Q 029526 127 LSAE---LIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 127 ~~~e---~~~~~i~~Gi~KINi~T~l~ 150 (192)
.+++ .+..+++.+..-|=+++.+.
T Consensus 324 ~~~dA~~~i~~~~~g~aDlVa~GR~~i 350 (407)
T 3tjl_A 324 YDAPEFKTLKEDIADKRTLVGFSRYFT 350 (407)
T ss_dssp GGTTTTHHHHHHHTTSSEEEECSHHHH
T ss_pred CHHHHHHHHHhhccCCCeEEEeChhhh
Confidence 3331 23333334578888888763
No 264
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=82.27 E-value=5 Score=36.67 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=55.6
Q ss_pred CCHHH---HHHHhhhhCCcEEEEecCcCC-CC--------------------------CCC--------CCCCCCHHHHH
Q 029526 65 TDVNQ---AEEFIDETDIDALAVCIGNVH-GK--------------------------YPS--------SGPNLKLDLLK 106 (192)
Q Consensus 65 T~pee---a~~Fv~~TgvD~LAvaiGt~H-G~--------------------------y~~--------~~p~ld~~~L~ 106 (192)
.|++. +.+-+++.|+|+|.+.+++.. |. +.+ ..|.+.++.++
T Consensus 257 ~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~ 336 (511)
T 1kbi_A 257 SDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIE 336 (511)
T ss_dssp SSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHH
Confidence 55654 444556689999999998643 21 000 12567899999
Q ss_pred HHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 107 DLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 107 ~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
.|++.+ ++|+++-|... .++.+++.+.|+.=|-+
T Consensus 337 ~lr~~~---~~PvivKgv~~--~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 337 ELKKKT---KLPIVIKGVQR--TEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp HHHHHC---SSCEEEEEECS--HHHHHHHHHTTCSEEEE
T ss_pred HHHHHh---CCcEEEEeCCC--HHHHHHHHHcCCCEEEE
Confidence 999988 69999997543 67899999999998887
No 265
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=82.22 E-value=19 Score=31.27 Aligned_cols=112 Identities=9% Similarity=0.090 Sum_probs=73.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
++++.||+.+=+.-.. +.++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|++ +.|
T Consensus 161 ~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a~g~-d~~l~vD------an---------~~~-~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 161 GWVEQGFTAAKLKVGR-APRKDAANLRAMRQRVGA-DVEILVD------AN---------QSL-GRHDALAMLRILDEAG 222 (389)
T ss_dssp HHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCT-TSEEEEE------CT---------TCC-CHHHHHHHHHHHHHTT
T ss_pred HHHHCCCCEEeeccCC-CHHHHHHHHHHHHHHcCC-CceEEEE------CC---------CCc-CHHHHHHHHHHHHhcC
Confidence 3567899998887554 677777777776665421 3333211 11 123 4788888854 468
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHH-hhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLH-ALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~-~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
++++-- + -|.-|++-+++|+ +.+ ++|++. |.|=.+.++++++++.| +.=||+.
T Consensus 223 i~~iEq---------P--~~~~d~~~~~~l~~~~~---~iPIa~-dE~i~~~~~~~~~i~~~~~d~v~ik 277 (389)
T 3ozy_A 223 CYWFEE---------P--LSIDDIEGHRILRAQGT---PVRIAT-GENLYTRNAFNDYIRNDAIDVLQAD 277 (389)
T ss_dssp CSEEES---------C--SCTTCHHHHHHHHTTCC---SSEEEE-CTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CCEEEC---------C--CCcccHHHHHHHHhcCC---CCCEEe-CCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 888841 1 1334889899998 777 699876 55556778899999876 6667764
No 266
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=82.18 E-value=16 Score=32.51 Aligned_cols=68 Identities=15% Similarity=0.082 Sum_probs=50.2
Q ss_pred CHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++ .+++++-= + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.
T Consensus 252 ~~~~A~~~~~~L~~~~i~~iEe---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d 316 (440)
T 3t6c_A 252 TPINAIHMAKALEPYQLFFLED---------P--VAPENTEWLKMLRQQS---STPIAM-GELFVNVNEWKPLIDNKLID 316 (440)
T ss_dssp CHHHHHHHHHHTGGGCCSEEEC---------S--SCGGGGGGHHHHHHHC---CSCEEE-CTTCCSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHhhhcCCCEEEC---------C--CChhhHHHHHHHHhhc---CCCEEe-CcccCCHHHHHHHHHcCCcc
Confidence 58899998654 57887741 1 1334788899999887 699877 66677888999999877 66
Q ss_pred EeecchH
Q 029526 142 KFNVNTE 148 (192)
Q Consensus 142 KINi~T~ 148 (192)
=||+...
T Consensus 317 ~v~~k~~ 323 (440)
T 3t6c_A 317 YIRCHIS 323 (440)
T ss_dssp EECCCGG
T ss_pred ceeechh
Confidence 6777643
No 267
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=82.08 E-value=8.9 Score=32.35 Aligned_cols=62 Identities=19% Similarity=0.236 Sum_probs=42.9
Q ss_pred hcCCCEeEeeCCC-------------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 5 VLGFDSLMVDGSH-------------LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 5 ~~GFtSVM~D~S~-------------l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
++||+.+.+ |++ .+++|-+..|+.|++-+.. ..|=+.++.-+ |.+|+++.
T Consensus 35 ~aG~d~ilv-Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~--~~vvaD~pfgs--------------y~~~~~a~ 97 (264)
T 1m3u_A 35 DEGLNVMLV-GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPN--CLLLADLPFMA--------------YATPEQAF 97 (264)
T ss_dssp HHTCCEEEE-CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTT--SEEEEECCTTS--------------SSSHHHHH
T ss_pred HcCCCEEEE-CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCC--CcEEEECCCCC--------------cCCHHHHH
Confidence 578888877 644 3789999999999887752 33436665531 34777766
Q ss_pred ----HHhhhhCCcEEEE
Q 029526 72 ----EFIDETDIDALAV 84 (192)
Q Consensus 72 ----~Fv~~TgvD~LAv 84 (192)
+|++ +|++++=+
T Consensus 98 ~~a~rl~k-aGa~aVkl 113 (264)
T 1m3u_A 98 ENAATVMR-AGANMVKI 113 (264)
T ss_dssp HHHHHHHH-TTCSEEEC
T ss_pred HHHHHHHH-cCCCEEEE
Confidence 5776 99886543
No 268
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=81.59 E-value=11 Score=32.36 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=43.9
Q ss_pred hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEe---e-cCCC-CCHHHHHHHHhcCCeEeecchHHH
Q 029526 76 ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVL---H-GASG-LSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 76 ~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVl---H-GgSG-~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
+-|.|++=+ || .| +.+.+++|.+.+ ++|++. - |.+. ++.+ +.-++|++-|-+...+.
T Consensus 186 eAGAD~i~~-----e~-----~~--~~~~~~~i~~~~---~~P~~~n~~~~g~tp~~~~~---eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 186 KAGADAIFP-----EA-----LQ--SEEEFRLFNSKV---NAPLLANMTEFGKTPYYSAE---EFANMGFQMVIYPVTSL 247 (305)
T ss_dssp HHTCSEEEE-----TT-----CC--SHHHHHHHHHHS---CSCBEEECCTTSSSCCCCHH---HHHHTTCSEEEECSHHH
T ss_pred HcCCCEEEE-----cC-----CC--CHHHHHHHHHHc---CCCEEEeecCCCCCCCCCHH---HHHHcCCCEEEEchHHH
Confidence 568887764 11 12 567778888777 688853 2 3343 4544 45566999999998888
Q ss_pred HHHHHHhc
Q 029526 151 KAYMDSLS 158 (192)
Q Consensus 151 ~a~~~~~~ 158 (192)
.+...+++
T Consensus 248 raa~~a~~ 255 (305)
T 3ih1_A 248 RVAAKAYE 255 (305)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877764
No 269
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=81.53 E-value=22 Score=29.57 Aligned_cols=60 Identities=15% Similarity=0.318 Sum_probs=41.8
Q ss_pred cCCCHHHHHHHhhh---hCCcEEEEec-CcCCC--CCCCCCCCCCHHHHHHHHhhhccCCccEEeec
Q 029526 63 KLTDVNQAEEFIDE---TDIDALAVCI-GNVHG--KYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG 123 (192)
Q Consensus 63 ~~T~peea~~Fv~~---TgvD~LAvai-Gt~HG--~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG 123 (192)
...+++++.+.+++ .|+|.+-+.. |.+-. .+.. .+.++.+.|+++-+...+.++|+.+|-
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~-~~~~~~e~l~~~~~~A~~~g~~v~~H~ 227 (403)
T 3gnh_A 162 NSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPG-QQQLTYEEMKAVVDEAHMAGIKVAAHA 227 (403)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTT-CBCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCc-cccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 34778888888765 5888887764 32211 1222 467888989888887766689999995
No 270
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=81.52 E-value=5.3 Score=33.35 Aligned_cols=81 Identities=14% Similarity=0.079 Sum_probs=55.4
Q ss_pred CHHHHHHHh---hhhC-CcEEEEecCc-----CC--------------CCCCCCCCC---CCHHHHHHHHhhhccCCccE
Q 029526 66 DVNQAEEFI---DETD-IDALAVCIGN-----VH--------------GKYPSSGPN---LKLDLLKDLHALSSKKGVLL 119 (192)
Q Consensus 66 ~peea~~Fv---~~Tg-vD~LAvaiGt-----~H--------------G~y~~~~p~---ld~~~L~~I~~~~~~~~iPL 119 (192)
++++..+|+ ++.| +|.|.++-.+ .+ |.|.+ +. ..++.++++++.+. ++|+
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg--~~~~p~~~~~i~~v~~~~~--~ipv 247 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGG--KYILPTALANVNAFYRRCP--DKLV 247 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEES--GGGHHHHHHHHHHHHHHCT--TSEE
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCc--ccccHHHHHHHHHHHHhcC--CCCE
Confidence 556655554 6789 9999876544 11 12221 21 23677788887762 5999
Q ss_pred EeecCCCCCHHHHHHHHhcCCeEeecchHHHH
Q 029526 120 VLHGASGLSAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 120 VlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
+-=||-.. .++..+++..|..=|-++|.+..
T Consensus 248 i~~GGI~~-~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 248 FGCGGVYS-GEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp EEESSCCS-HHHHHHHHHHTCSSEEECHHHHH
T ss_pred EEECCCCC-HHHHHHHHHcCCCEEEEchhhHh
Confidence 98886554 56688888999999999999864
No 271
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=81.18 E-value=5.7 Score=33.20 Aligned_cols=119 Identities=14% Similarity=0.209 Sum_probs=75.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|-++|.+.+.+= .||+|| ..++.+.|+++|+.+ +=-+ ..-|+++..++..+.+.=-.
T Consensus 111 ~~~~aGvdG~Iip--DLP~eE----~~~~~~~~~~~Gl~~---I~lv-------------aP~t~~eRi~~ia~~a~gFi 168 (252)
T 3tha_A 111 KAKSLGICALIVP--ELSFEE----SDDLIKECERYNIAL---ITLV-------------SVTTPKERVKKLVKHAKGFI 168 (252)
T ss_dssp HHHHTTEEEEECT--TCCGGG----CHHHHHHHHHTTCEE---CEEE-------------ETTSCHHHHHHHHTTCCSCE
T ss_pred HHHHcCCCEEEeC--CCCHHH----HHHHHHHHHHcCCeE---EEEe-------------CCCCcHHHHHHHHHhCCCeE
Confidence 5778898888763 389987 457888999988764 2112 12355677777766653333
Q ss_pred EEEec-CcCCCCCCCCCCCC---CHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHHHHH
Q 029526 82 LAVCI-GNVHGKYPSSGPNL---KLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVRKAY 153 (192)
Q Consensus 82 LAvai-Gt~HG~y~~~~p~l---d~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~~a~ 153 (192)
-.||. |+. |. ...+ -.+.+++|++.+ ++|++. |.|+ ..++++++.+ +..=+=|+|.+-+..
T Consensus 169 Y~Vs~~GvT-G~----~~~~~~~~~~~v~~vr~~~---~~Pv~v--GfGIst~e~a~~~~~-~ADGVIVGSAiVk~i 234 (252)
T 3tha_A 169 YLLASIGIT-GT----KSVEEAILQDKVKEIRSFT---NLPIFV--GFGIQNNQDVKRMRK-VADGVIVGTSIVKCF 234 (252)
T ss_dssp EEECCSCSS-SC----SHHHHHHHHHHHHHHHTTC---CSCEEE--ESSCCSHHHHHHHTT-TSSEEEECHHHHHHT
T ss_pred EEEecCCCC-Cc----ccCCCHHHHHHHHHHHHhc---CCcEEE--EcCcCCHHHHHHHHh-cCCEEEECHHHHHHH
Confidence 34552 322 11 1111 135677777776 699998 5566 5678888766 577888899885443
No 272
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=81.01 E-value=13 Score=31.50 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=70.6
Q ss_pred hcCCCEeEeeCC-------------CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 5 VLGFDSLMVDGS-------------HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 5 ~~GFtSVM~D~S-------------~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
++||+.+.. |+ ..+++|-+..|+.|++-+.. ..|=+.++.-+ .-.+|+++.
T Consensus 35 ~aG~d~ilv-GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~--~~vvaD~pfgs-------------y~~s~~~a~ 98 (275)
T 1o66_A 35 DAGVEMLLV-GDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKN--AMIVSDLPFGA-------------YQQSKEQAF 98 (275)
T ss_dssp HTTCCEEEE-CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSS--SEEEEECCTTS-------------SSSCHHHHH
T ss_pred HcCCCEEEE-CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCC--CeEEEECCCCC-------------ccCCHHHHH
Confidence 578887766 43 34799999999999887752 33446665532 125677766
Q ss_pred ----HHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC-----------C---CC---CHH
Q 029526 72 ----EFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA-----------S---GL---SAE 130 (192)
Q Consensus 72 ----~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg-----------S---G~---~~e 130 (192)
+|++ +|++++=+==| . +..+.|+..++ .+||++-|=| - |- -++
T Consensus 99 ~na~rl~k-aGa~aVklEdg-----------~---e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~ 162 (275)
T 1o66_A 99 AAAAELMA-AGAHMVKLEGG-----------V---WMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA 162 (275)
T ss_dssp HHHHHHHH-TTCSEEEEECS-----------G---GGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----------CHHH
T ss_pred HHHHHHHH-cCCcEEEECCc-----------H---HHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeChHHHHH
Confidence 5776 99997665311 1 22344444443 2699874433 0 11 133
Q ss_pred HHHHH---HhcCCeEeec---chHHHHHHHHHhc
Q 029526 131 LIKGC---IERGVRKFNV---NTEVRKAYMDSLS 158 (192)
Q Consensus 131 ~~~~~---i~~Gi~KINi---~T~l~~a~~~~~~ 158 (192)
-+++| .+.|..=|=+ -+++...+++.+.
T Consensus 163 ~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l~ 196 (275)
T 1o66_A 163 LLNDAKAHDDAGAAVVLMECVLAELAKKVTETVS 196 (275)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCCcEEEEecCCHHHHHHHHHhCC
Confidence 34333 3556544433 4577777777663
No 273
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=80.93 E-value=4.6 Score=35.44 Aligned_cols=69 Identities=13% Similarity=0.211 Sum_probs=43.5
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCC
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGV 140 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi 140 (192)
.+++..+++++.|++.+-+.++. |+ ....+.+.|+++-+..+..+.|+.+|-...-. .+.++.+.+.|+
T Consensus 159 ~~~e~~~l~~~~G~~~i~~~~~~-~~-----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~ 228 (501)
T 2vm8_A 159 IQEEMEALVKDHGVNSFLVYMAF-KD-----RFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGI 228 (501)
T ss_dssp HHHHHHHHHHHSCCCEEEEESSS-TT-----TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTC
T ss_pred cHHHHHHHHHhCCceEEEEeecc-CC-----CCCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCC
Confidence 35778888877888877765542 22 13456777777766655557999999753211 234445555554
No 274
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=80.91 E-value=12 Score=27.62 Aligned_cols=67 Identities=24% Similarity=0.297 Sum_probs=49.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
++.++|.+.+++...|.+=.-+ ..|..| ++++++|++.-....+|+++=-+.+ ..++..++.+.|+.
T Consensus 44 ~~g~~al~~~~~~~~DlillD~---------~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~-~~~~~~~~~~~Ga~ 111 (134)
T 3to5_A 44 DDGLTALPMLKKGDFDFVVTDW---------NMPGMQGIDLLKNIRADEELKHLPVLMITAEA-KREQIIEAAQAGVN 111 (134)
T ss_dssp SSHHHHHHHHHHHCCSEEEEES---------CCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC-CHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHhCCCCEEEEcC---------CCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC-CHHHHHHHHHCCCC
Confidence 4568899999999999887764 146655 8999999864322369988776555 45668889999975
No 275
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=80.51 E-value=2.6 Score=38.77 Aligned_cols=81 Identities=17% Similarity=0.095 Sum_probs=55.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCC---CCHHHHHHHHhhhccCCccEEeecCCCCC-H---------H
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPN---LKLDLLKDLHALSSKKGVLLVLHGASGLS-A---------E 130 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~---ld~~~L~~I~~~~~~~~iPLVlHGgSG~~-~---------e 130 (192)
+.||.+..+..++-|.|.|-+.= .-|... .|. .+++.+++|.+.+ ++|+-+=||--.. | +
T Consensus 279 ~~dp~~~A~~~~~~Ga~~l~~~d--l~~~~~--~~~~~~~~~~~i~~i~~~~---~ipi~vgGGIr~~~d~~~~~~~~~~ 351 (555)
T 1jvn_A 279 LGKPVQLAQKYYQQGADEVTFLN--ITSFRD--CPLKDTPMLEVLKQAAKTV---FVPLTVGGGIKDIVDVDGTKIPALE 351 (555)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEEE--EC---C--CCGGGCHHHHHHHHHTTTC---CSCEEEESSCSCEECTTCCEECHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEEEe--CCcccc--ccCCCchHHHHHHHHHhhC---CCcEEEeCccccchhcccccchHHH
Confidence 45787766666677999887652 112221 122 2467777777666 6999998876432 2 6
Q ss_pred HHHHHHhcCCeEeecchHHHH
Q 029526 131 LIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 131 ~~~~~i~~Gi~KINi~T~l~~ 151 (192)
.+++..+.|+.||-++|....
T Consensus 352 ~a~~~l~aGad~V~igt~~~~ 372 (555)
T 1jvn_A 352 VASLYFRSGADKVSIGTDAVY 372 (555)
T ss_dssp HHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHcCCCEEEECCHHhh
Confidence 799999999999999999864
No 276
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=80.37 E-value=4.3 Score=34.33 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=57.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCC-CeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKG-MLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~g-v~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.++..|+|+++--++..|...+....+.+.+.+...+ +.+-. .|.+.. +. ....+ ++..++++ .|++
T Consensus 75 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~----~~~~~---~~~~~l~~-~g~~ 142 (426)
T 2z00_A 75 AAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHP-AAALTE---KQ----EGKTL---TPAGLLRE-AGAV 142 (426)
T ss_dssp HHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECC-EECSBG---GG----CSSSB---CCHHHHHH-HTCC
T ss_pred HHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEE-EEEeec---CC----ChhhH---HHHHHHHH-cCCE
Confidence 4788999999877665554444445556666666655 44411 111110 00 00112 34455554 4765
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
++ |. |+. +..+.+.|+++-+...+.+.|+.+|-.
T Consensus 143 ~i----~~-~~~-----~~~~~~~l~~~~~~a~~~g~~v~~H~~ 176 (426)
T 2z00_A 143 LL----TD-DGR-----TNEDAGVLAAGLLMAAPLGLPVAVHAE 176 (426)
T ss_dssp EE----EC-TTS-----CCCCHHHHHHHHHHHGGGTCCEEECCC
T ss_pred EE----EC-CCc-----CCCCHHHHHHHHHHHHhhCCEEEEeCC
Confidence 44 32 443 345677888877766666899999975
No 277
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=79.63 E-value=4.6 Score=34.70 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=61.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEe----cCc-----------------CCCCCCCC-------CCCCCHHHHHHHHhhhccC
Q 029526 64 LTDVNQAEEFIDETDIDALAVC----IGN-----------------VHGKYPSS-------GPNLKLDLLKDLHALSSKK 115 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAva----iGt-----------------~HG~y~~~-------~p~ld~~~L~~I~~~~~~~ 115 (192)
-.+.+||.+=+ .-|.|++..- .|| ..|.|... .-.-||++|++|++..
T Consensus 122 ~~~l~EAlrri-~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~--- 197 (291)
T 3o07_A 122 AKDLGEALRRI-NEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG--- 197 (291)
T ss_dssp ESSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT---
T ss_pred CCCHHHHHHHH-HCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc---
Confidence 36788999866 5788987753 111 34543110 1245899999999987
Q ss_pred CccEEeecCCCC-CHHHHHHHHhcCCeEeecchHHHH
Q 029526 116 GVLLVLHGASGL-SAELIKGCIERGVRKFNVNTEVRK 151 (192)
Q Consensus 116 ~iPLVlHGgSG~-~~e~~~~~i~~Gi~KINi~T~l~~ 151 (192)
++|+|+=+..|+ +.++.+++.++|+.=|=|++.+..
T Consensus 198 ~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 198 KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 699987666677 678899999999999999998754
No 278
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=79.53 E-value=2.6 Score=34.25 Aligned_cols=63 Identities=17% Similarity=0.347 Sum_probs=48.6
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec-
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV- 145 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi- 145 (192)
..++.+|+++.|+|++.++.-|+|-. +.+|++.+ ++|++ |+.+.-.+.+.+.|..||=+
T Consensus 65 l~~~~~~L~~~g~~~iviaCNTa~~~------------~~~l~~~~---~iPvi-----~i~~~~~~~a~~~~~~rVgvL 124 (231)
T 3ojc_A 65 LSNAAISLKHAGAEVIVVCTNTMHKV------------ADDIEAAC---GLPLL-----HIADATAVQIKQQGIDKIGLL 124 (231)
T ss_dssp HHHHHHHHHHHTCCEEEECSSGGGGG------------HHHHHHHH---CSCBC-----CHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCchHHH------------HHHHHHhC---CCCEe-----ccHHHHHHHHHHcCCCEEEEE
Confidence 35677788889999999999999932 35677777 69986 56677777777788899977
Q ss_pred chHH
Q 029526 146 NTEV 149 (192)
Q Consensus 146 ~T~l 149 (192)
+|..
T Consensus 125 aT~~ 128 (231)
T 3ojc_A 125 GTRY 128 (231)
T ss_dssp SCHH
T ss_pred cCHH
Confidence 6764
No 279
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=78.90 E-value=16 Score=31.27 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=37.7
Q ss_pred CHHHHHHHHhhhccCCccEEe----ecCCC-CCHHHHHHHHhcCCeEeecchHHHHHHHHHhc
Q 029526 101 KLDLLKDLHALSSKKGVLLVL----HGASG-LSAELIKGCIERGVRKFNVNTEVRKAYMDSLS 158 (192)
Q Consensus 101 d~~~L~~I~~~~~~~~iPLVl----HGgSG-~~~e~~~~~i~~Gi~KINi~T~l~~a~~~~~~ 158 (192)
+.+.++++.+.+ ++||+. .|.+. ++ .++.-++|++-|-+...+..+.+.+++
T Consensus 195 ~~ee~~~~~~~~---~~Pl~~n~~~~g~tp~~~---~~eL~~lGv~~v~~~~~~~raa~~a~~ 251 (298)
T 3eoo_A 195 TLDDYRRFKEAV---KVPILANLTEFGSTPLFT---LDELKGANVDIALYCCGAYRAMNKAAL 251 (298)
T ss_dssp SHHHHHHHHHHH---CSCBEEECCTTSSSCCCC---HHHHHHTTCCEEEECSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHc---CCCeEEEeccCCCCCCCC---HHHHHHcCCeEEEEchHHHHHHHHHHH
Confidence 678888888877 588844 34443 34 445556799999999888888877764
No 280
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=78.88 E-value=32 Score=29.82 Aligned_cols=115 Identities=14% Similarity=0.256 Sum_probs=75.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh-----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE----- 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~----- 76 (192)
++++.||+.+=+.... ++++.++..+.|.+..-. ++.+=.+ . ...+ ++++|.+|+++
T Consensus 152 ~~~~~Gf~~~KlK~g~-~~~~d~~~v~avR~a~g~-~~~L~vD------a---------N~~w-~~~~A~~~~~~l~~~~ 213 (379)
T 3r0u_A 152 NGVEANFTAIKVKTGA-DFNRDIQLLKALDNEFSK-NIKFRFD------A---------NQGW-NLAQTKQFIEEINKYS 213 (379)
T ss_dssp HHHHTTCCEEEEECSS-CHHHHHHHHHHHHHHCCT-TSEEEEE------C---------TTCC-CHHHHHHHHHHHHTSC
T ss_pred HHHHcCCCEEeeecCC-CHHHHHHHHHHHHHhcCC-CCeEEEe------C---------CCCc-CHHHHHHHHHHHhhcC
Confidence 3567799999888754 678888777766554321 1221111 0 0123 58899999754
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
.+++++- -+ -|.-|++-+++|++.+ ++|++. |.|=.+..+++++++.| +.=||+....
T Consensus 214 ~~l~~iE---------eP--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 214 LNVEIIE---------QP--VKYYDIKAMAEITKFS---NIPVVA-DESVFDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp CCEEEEE---------CC--SCTTCHHHHHHHHHHC---SSCEEE-STTCSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCcEEEE---------CC--CCcccHHHHHHHHhcC---CCCEEe-CCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 3455553 11 2445899999999887 699888 56777888999999987 5567886544
No 281
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=78.84 E-value=7 Score=34.09 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=56.4
Q ss_pred CCHHHHHHH---hhhhCCcEEEEecCcCC------------------------------CCC-----CCCCCCCCHHHHH
Q 029526 65 TDVNQAEEF---IDETDIDALAVCIGNVH------------------------------GKY-----PSSGPNLKLDLLK 106 (192)
Q Consensus 65 T~peea~~F---v~~TgvD~LAvaiGt~H------------------------------G~y-----~~~~p~ld~~~L~ 106 (192)
.|++...+. +++.|+|+|.+.+++-- |.- +...|.+.++.++
T Consensus 143 ~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~ 222 (368)
T 2nli_A 143 KDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIE 222 (368)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHH
Confidence 577654444 45579999999988421 110 0013678899999
Q ss_pred HHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecc
Q 029526 107 DLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 107 ~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
.|++.+ ++|+++-|. .+.++.+++.+.|+.=|-++
T Consensus 223 ~lr~~~---~~PvivK~v--~~~e~a~~a~~~Gad~I~vs 257 (368)
T 2nli_A 223 EIAGHS---GLPVFVKGI--QHPEDADMAIKRGASGIWVS 257 (368)
T ss_dssp HHHHHS---SSCEEEEEE--CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHc---CCCEEEEcC--CCHHHHHHHHHcCCCEEEEc
Confidence 999988 699999985 67899999999999888773
No 282
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=78.70 E-value=3.5 Score=35.30 Aligned_cols=65 Identities=14% Similarity=0.241 Sum_probs=47.5
Q ss_pred HHHHHhhhhC--CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 69 QAEEFIDETD--IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 69 ea~~Fv~~Tg--vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
.++.++ +.| +|++.+.. .|| .|...++.+++|++.+ +.|+|+.| ...+.++.+++++.|+.-|-+
T Consensus 110 ~a~~~~-~~g~~~~~i~i~~--~~G-----~~~~~~~~i~~lr~~~---~~~~vi~G-~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 110 FVQQLA-AEHLTPEYITIDI--AHG-----HSNAVINMIQHIKKHL---PESFVIAG-NVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHH-HTTCCCSEEEEEC--SSC-----CSHHHHHHHHHHHHHC---TTSEEEEE-EECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHH-hcCCCCCEEEEEC--CCC-----CcHHHHHHHHHHHHhC---CCCEEEEC-CcCCHHHHHHHHHcCCCEEEE
Confidence 444444 556 88876644 455 2566788899999887 45777766 446779999999999999988
No 283
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=78.68 E-value=22 Score=30.81 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=48.8
Q ss_pred CHHHHHHHhhhhC--Cc-EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDETD--ID-ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~Tg--vD-~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++.. .+ ++ . .|--|++-++++++.+ ++|+++ |.|=.+.++++++++.| +.
T Consensus 206 ~~~~A~~~~~~l~~~~~i~i------------E-eP~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~~~~~a~d 268 (386)
T 3fv9_G 206 TVEHALRMLSLLPPGLDIVL------------E-APCASWAETKSLRARC---ALPLLL-DELIQTETDLIAAIRDDLCD 268 (386)
T ss_dssp CHHHHHHHHHHSCSSCCCEE------------E-CCCSSHHHHHHHHTTC---CSCEEE-STTCCSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHhhccCCcEE------------e-cCCCCHHHHHHHHhhC---CCCEEe-CCCcCCHHHHHHHHHhCCCC
Confidence 5899999987651 11 22 2 2444899999999887 699887 55667788999999876 67
Q ss_pred EeecchHH
Q 029526 142 KFNVNTEV 149 (192)
Q Consensus 142 KINi~T~l 149 (192)
=||+....
T Consensus 269 ~v~~k~~~ 276 (386)
T 3fv9_G 269 GVGLKVSK 276 (386)
T ss_dssp EEEEEHHH
T ss_pred EEEECccc
Confidence 77876544
No 284
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=78.48 E-value=21 Score=30.65 Aligned_cols=113 Identities=13% Similarity=0.111 Sum_probs=73.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.+=+.-.. +.++.++..+.|.+..-+ ++.+=.+ .+ ..+ ++++|.+|+++ .+
T Consensus 150 ~~~~~G~~~~K~KvG~-~~~~d~~~v~avR~~~g~-~~~l~vD------aN---------~~~-~~~~A~~~~~~l~~~~ 211 (368)
T 3q45_A 150 QIKKNGFEIIKVKVGG-SKELDVERIRMIREAAGD-SITLRID------AN---------QGW-SVETAIETLTLLEPYN 211 (368)
T ss_dssp HHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCS-SSEEEEE------CT---------TCB-CHHHHHHHHHHHGGGC
T ss_pred HHHHcCCCeEEEEecC-CHHHHHHHHHHHHHHhCC-CCeEEEE------CC---------CCC-ChHHHHHHHHHHhhcC
Confidence 3567899998887543 567788777776665421 2222211 01 123 47888888654 57
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
++++-= + -|.-|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.=||+..
T Consensus 212 i~~iEq---------P--~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 212 IQHCEE---------P--VSRNLYTALPKIRQAC---RIPIMA-DESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp CSCEEC---------C--BCGGGGGGHHHHHHTC---SSCEEE-STTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred CCEEEC---------C--CChhHHHHHHHHHhhC---CCCEEE-cCCcCCHHHHHHHHHcCCCCeEEech
Confidence 777741 1 2334778889999887 699887 55667888999999876 66677764
No 285
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=77.40 E-value=2.1 Score=34.24 Aligned_cols=61 Identities=16% Similarity=0.254 Sum_probs=45.1
Q ss_pred HHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec-ch
Q 029526 69 QAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV-NT 147 (192)
Q Consensus 69 ea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi-~T 147 (192)
++.+|+++.|+|+++++.-|.| .+ +.+|++.+ ++|++ |+.+.-++.+.+.+..||=+ +|
T Consensus 65 ~~~~~l~~~g~d~iviaCnTa~-~~-----------~~~l~~~~---~iPvi-----~i~~~~~~~a~~~~~~rigvlaT 124 (228)
T 1jfl_A 65 WTAKRLEECGADFIIMPCNTAH-AF-----------VEDIRKAI---KIPII-----SMIEETAKKVKELGFKKAGLLAT 124 (228)
T ss_dssp HHHHHHHHHTCSEEECSCTGGG-GG-----------HHHHHHHC---SSCBC-----CHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEEcCccHH-HH-----------HHHHHHhC---CCCEe-----chHHHHHHHHHHcCCCeEEEEec
Confidence 6778888999999999999999 21 56777777 58865 33355666666568888877 56
Q ss_pred HH
Q 029526 148 EV 149 (192)
Q Consensus 148 ~l 149 (192)
..
T Consensus 125 ~~ 126 (228)
T 1jfl_A 125 TG 126 (228)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 286
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=77.12 E-value=18 Score=30.63 Aligned_cols=70 Identities=16% Similarity=0.053 Sum_probs=46.5
Q ss_pred hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHHHHHHH
Q 029526 76 ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEVRKAYM 154 (192)
Q Consensus 76 ~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l~~a~~ 154 (192)
+-|+|++-+ || ..-+.+.+++|.+.++ .++|++.--.++ |.=.+++.-++| ++-|=+...+..+.+
T Consensus 177 eAGAd~i~~-----e~------~~~~~~~~~~i~~~~~-~~vP~i~n~~~~-~~~~~~eL~~lG~v~~v~~~~~~~raa~ 243 (290)
T 2hjp_A 177 EAGADAILI-----HS------RQKTPDEILAFVKSWP-GKVPLVLVPTAY-PQLTEADIAALSKVGIVIYGNHAIRAAV 243 (290)
T ss_dssp HTTCSEEEE-----CC------CCSSSHHHHHHHHHCC-CSSCEEECGGGC-TTSCHHHHHTCTTEEEEEECSHHHHHHH
T ss_pred HcCCcEEEe-----CC------CCCCHHHHHHHHHHcC-CCCCEEEeccCC-CCCCHHHHHhcCCeeEEEechHHHHHHH
Confidence 568888765 22 0124567788888773 139988643323 322356777889 999999998887777
Q ss_pred HHhc
Q 029526 155 DSLS 158 (192)
Q Consensus 155 ~~~~ 158 (192)
.+++
T Consensus 244 ~a~~ 247 (290)
T 2hjp_A 244 GAVR 247 (290)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 287
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=76.96 E-value=14 Score=31.40 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=56.3
Q ss_pred CCCHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 64 LTDVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 64 ~T~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
.-+|++..+.++ +.|++.+-+.-|+- ++ +.++++.+.++-+.+++.++.+.+.=|+ ++++.+++..+.|+
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~---~p---~~~~~~~l~~ll~~ik~~g~~i~~t~G~-l~~e~l~~L~~aGv 170 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWK---NP---HERDMPYLEQMVQGVKAMGLEACMTLGT-LSESQAQRLANAGL 170 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCS---SC---CTTTHHHHHHHHHHHHHTTSEEEEECSS-CCHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCC---CC---CcCCHHHHHHHHHHHHHcCCeEEEecCC-CCHHHHHHHHHCCC
Confidence 357888877765 46888877655432 22 2367777766655554335555555554 78999999999999
Q ss_pred eEeecchHHHHHHHHHhc
Q 029526 141 RKFNVNTEVRKAYMDSLS 158 (192)
Q Consensus 141 ~KINi~T~l~~a~~~~~~ 158 (192)
..+|++=+-.....+.+.
T Consensus 171 d~v~i~les~~e~~~~i~ 188 (369)
T 1r30_A 171 DYYNHNLDTSPEFYGNII 188 (369)
T ss_dssp CEEECCCBSCHHHHHHHC
T ss_pred CEEeecCcCCHHHHHHhC
Confidence 988875333333344443
No 288
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=76.94 E-value=10 Score=32.34 Aligned_cols=75 Identities=11% Similarity=0.045 Sum_probs=51.8
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEec------CcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCI------GNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvai------Gt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
.+++|++|+.| ++-|.|+|.+=- --.+|+. -.-+++.|++|++.+ .+|+.-=++-+. .+.++.+.
T Consensus 27 d~~~~e~A~~y-e~~GA~~lsvLe~~~~Di~~~~g~~----R~~~~~~i~~i~~~v---~iPvl~k~~i~~-ide~qil~ 97 (297)
T 4adt_A 27 DVKNVEQAKIA-EKAGAIGVMILENIPSELRNTDGVA----RSVDPLKIEEIRKCI---SINVLAKVRIGH-FVEAQILE 97 (297)
T ss_dssp EESSHHHHHHH-HHHTCSEEEECCCCC-----CCCCC----CCCCHHHHHHHHTTC---CSEEEEEEETTC-HHHHHHHH
T ss_pred CCCcHHHHHHH-HHcCCCEEEEecCCCCcchhcCCcc----cCCCHHHHHHHHHhc---CCCEEEeccCCc-HHHHHHHH
Confidence 46889888665 688999877641 1122322 223789999999988 699863333333 77889999
Q ss_pred hcCCeEeecc
Q 029526 137 ERGVRKFNVN 146 (192)
Q Consensus 137 ~~Gi~KINi~ 146 (192)
..|+.+||..
T Consensus 98 aaGAD~Id~s 107 (297)
T 4adt_A 98 ELKVDMLDES 107 (297)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEcC
Confidence 9999999643
No 289
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=76.90 E-value=4.1 Score=35.11 Aligned_cols=70 Identities=19% Similarity=0.310 Sum_probs=43.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|+++|.+.||+|- ++. ...+++|++.+. .+.+|+- |-| +++.+.+|. +||||.
T Consensus 222 eAl~aGaDiImLDn--~s~----~~l~~av~~~~~-~v~leaS-GGI-----------------t~~~i~~~A-~tGVD~ 275 (300)
T 3l0g_A 222 ESLSNNVDMILLDN--MSI----SEIKKAVDIVNG-KSVLEVS-GCV-----------------NIRNVRNIA-LTGVDY 275 (300)
T ss_dssp HHHHTTCSEEEEES--CCH----HHHHHHHHHHTT-SSEEEEE-SSC-----------------CTTTHHHHH-TTTCSE
T ss_pred HHHHcCCCEEEECC--CCH----HHHHHHHHhhcC-ceEEEEE-CCC-----------------CHHHHHHHH-HcCCCE
Confidence 68999999999996 444 345566666553 5677664 111 234555654 899997
Q ss_pred EEEecCcCCCCCCCCCCCCCHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLD 103 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~ 103 (192)
+. +|.. +.. .|.+||.
T Consensus 276 Is--vGal---ths-a~~lDis 291 (300)
T 3l0g_A 276 IS--IGCI---TNS-FQNKDIG 291 (300)
T ss_dssp EE--CGGG---TSS-CCCCCEE
T ss_pred EE--eCcc---ccC-CCcceeE
Confidence 65 5553 112 3666664
No 290
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=76.85 E-value=34 Score=29.17 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=73.1
Q ss_pred hhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh---CC
Q 029526 3 AIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---DI 79 (192)
Q Consensus 3 ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---gv 79 (192)
+.+.||+.+-+.-. .+.++.++..+.+.+.... ++.+=.+ .+.--++++|.+|+++. ++
T Consensus 155 ~~~~Gf~~~K~k~g-~~~~~di~~v~avr~~~g~-~~~l~vD----------------aN~~~~~~~A~~~~~~l~~~~i 216 (378)
T 4hpn_A 155 RRAEGFHACKIKIG-FGVEEDLRVIAAVREAIGP-DMRLMID----------------ANHGYTVTEAITLGDRAAGFGI 216 (378)
T ss_dssp HHHTTCSEEEEECC-SCHHHHHHHHHHHHHHHTT-TSEEEEE----------------CTTCCCHHHHHHHHHHHGGGCC
T ss_pred HHHhccceeccccc-CChHHHHHHHHHHHHhcCC-cEEEEEe----------------cCcccCHHHHHHHHhhhhhccc
Confidence 45679999888764 4678888777766554421 2221111 01123789999997653 44
Q ss_pred cEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 80 DALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 80 D~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
.++= ..-|.-|++-+++|++.+ ++|+++ |-|=.+..+++++++.| +.=+|+..
T Consensus 217 ~~iE-----------eP~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~i~~~a~d~i~~d~ 270 (378)
T 4hpn_A 217 DWFE-----------EPVVPEQLDAYARVRAGQ---PIPVAG-GETWHGRYGMWQALSAGAVDILQPDL 270 (378)
T ss_dssp SCEE-----------CCSCTTCHHHHHHHHHHS---SSCEEE-CTTCCHHHHHHHHHHTTCCSEECCBT
T ss_pred chhh-----------cCCCccchhhhHHHHhhC---CceeeC-CcCccchHhHHHHHHcCCCCEEeeCC
Confidence 4332 112445899999999888 699876 77777888999999876 55667653
No 291
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=76.78 E-value=31 Score=29.85 Aligned_cols=112 Identities=13% Similarity=0.158 Sum_probs=76.5
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh---C
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---D 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---g 78 (192)
++.+.||+.+=+.-...+.++.++..+.+.+.... ++.+=.+ ...--++++|.+|+++. +
T Consensus 174 ~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~G~-~~~l~vD----------------aN~~~~~~~A~~~~~~l~~~~ 236 (388)
T 4h83_A 174 NYQELGLAGVKFKVGGLSAAEDAARITAAREAAGD-DFIICID----------------ANQGYKPAVAVDLSRRIADLN 236 (388)
T ss_dssp HHHHHTBSEEEEECSSSCHHHHHHHHHHHHHHHCS-SSEEEEE----------------CTTCBCHHHHHHHHHHTTTSC
T ss_pred HHHHcCCceEeecCCCCCHHHHHHHHHHHHHhcCC-CeEEEEe----------------cCcCCCHHHHHHHHHHhhhcC
Confidence 35678999999998888999999887776654421 1211111 01123789999998764 4
Q ss_pred CcEEEEecCcCCCCCCCCCC---CCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 79 IDALAVCIGNVHGKYPSSGP---NLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p---~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+.++- .| .-|++.++++++.+ ++|+.+ |-|=.+..+++++++.| +.=||+..
T Consensus 237 ~~~iE-------------eP~~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~i~~~a~d~i~~d~ 292 (388)
T 4h83_A 237 IRWFE-------------EPVEWHNDKRSMRDVRYQG---SVPVCA-GQTEFSASGCRDLMETGAIDVCNFDS 292 (388)
T ss_dssp CCCEE-------------SCBCSTTHHHHHHHHHHHS---SSCEEE-CTTCSSHHHHHHHHHHTCCSEECCCG
T ss_pred cceee-------------cCcccccchHHHHHHHhhc---CCCccC-CccccChHhHHHHHHcCCCCeEeecc
Confidence 44332 23 23578889999887 699874 77888889999999888 55667753
No 292
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=76.78 E-value=2.2 Score=36.39 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=29.8
Q ss_pred CCccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 115 KGVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 115 ~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
.+||++||--.|-+.|.+++|++.|.+-|-|+-
T Consensus 73 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDg 105 (286)
T 1gvf_A 73 YNMPLALHLDHHESLDDIRRKVHAGVRSAMIDG 105 (286)
T ss_dssp TTSCBEEEEEEECCHHHHHHHHHTTCCEEEECC
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHcCCCeEEECC
Confidence 379999999999999999999999998887753
No 293
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=76.76 E-value=19 Score=30.60 Aligned_cols=105 Identities=16% Similarity=0.233 Sum_probs=67.0
Q ss_pred CCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecC
Q 029526 8 FDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIG 87 (192)
Q Consensus 8 FtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiG 87 (192)
++.||+---|+-+--+|...-+-++-. .....+|.|.- +.+|+++-+ +.|+|.+-.-
T Consensus 169 ~d~vlikdNHi~~~G~i~~Av~~ar~~-~~~~~IeVEv~-------------------tl~ea~eAl-~aGaD~I~LD-- 225 (287)
T 3tqv_A 169 FDAYLIKENHIRSAGGIAKAVTKAKKL-DSNKVVEVEVT-------------------NLDELNQAI-AAKADIVMLD-- 225 (287)
T ss_dssp SSSEEECTTTC----CHHHHHHHHHHH-CTTSCEEEEES-------------------SHHHHHHHH-HTTCSEEEEE--
T ss_pred ccEEEEeHHHHHHhCCHHHHHHHHHhh-CCCCcEEEEeC-------------------CHHHHHHHH-HcCCCEEEEc--
Confidence 578999877877666655443222222 23466777632 336777766 4589977762
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHH
Q 029526 88 NVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 88 t~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l 149 (192)
| ..++.++++.+.++ ..+++..=| |+..+.++...+.||.=|-+++-.
T Consensus 226 n-----------~~~~~l~~av~~~~-~~v~ieaSG--GIt~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 226 N-----------FSGEDIDIAVSIAR-GKVALEVSG--NIDRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp S-----------CCHHHHHHHHHHHT-TTCEEEEES--SCCTTTHHHHHTTTCSEEECSHHH
T ss_pred C-----------CCHHHHHHHHHhhc-CCceEEEEC--CCCHHHHHHHHHcCCCEEEEChhh
Confidence 1 23466777666653 258888777 788899999999999998887654
No 294
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=76.76 E-value=17 Score=25.68 Aligned_cols=68 Identities=13% Similarity=0.199 Sum_probs=51.0
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
..++.++|.+.+++...|.+-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.|+.
T Consensus 51 ~~~~~~~al~~l~~~~~dlii~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~ls~~~-~~~~~~~~~~~g~~ 118 (150)
T 4e7p_A 51 QAKNGQEAIQLLEKESVDIAILDVEM---------PVKTGLEVLEWIRSEKL--ETKVVVVTTFK-RAGYFERAVKAGVD 118 (150)
T ss_dssp EESSHHHHHHHHTTSCCSEEEECSSC---------SSSCHHHHHHHHHHTTC--SCEEEEEESCC-CHHHHHHHHHTTCS
T ss_pred EECCHHHHHHHhhccCCCEEEEeCCC---------CCCcHHHHHHHHHHhCC--CCeEEEEeCCC-CHHHHHHHHHCCCc
Confidence 35788999999999999998876421 222 3788899988643 68988887665 45668889999975
Q ss_pred E
Q 029526 142 K 142 (192)
Q Consensus 142 K 142 (192)
-
T Consensus 119 ~ 119 (150)
T 4e7p_A 119 A 119 (150)
T ss_dssp E
T ss_pred E
Confidence 4
No 295
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=76.66 E-value=4.9 Score=33.92 Aligned_cols=74 Identities=19% Similarity=0.289 Sum_probs=50.3
Q ss_pred CHHHHHHHhhhhCCcEEEEe---cCcCCCCCCCCCCCCCHHH----HHHHHhhhccCCccEEeecCCCC--CHH----HH
Q 029526 66 DVNQAEEFIDETDIDALAVC---IGNVHGKYPSSGPNLKLDL----LKDLHALSSKKGVLLVLHGASGL--SAE----LI 132 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAva---iGt~HG~y~~~~p~ld~~~----L~~I~~~~~~~~iPLVlHGgSG~--~~e----~~ 132 (192)
|+-.|+- +++.|+|+|.++ +++++| |+. .-.+.++- .+.|.+.+ ++|++.=.-+|- +.+ .+
T Consensus 25 D~~sA~~-~~~aG~~ai~vsg~s~a~~~G-~pD-~~~vt~~em~~~~~~I~~~~---~~pviaD~d~Gyg~~~~~~~~~v 98 (275)
T 2ze3_A 25 DVASARL-LEAAGFTAIGTTSAGIAHARG-RTD-GQTLTRDEMGREVEAIVRAV---AIPVNADIEAGYGHAPEDVRRTV 98 (275)
T ss_dssp SHHHHHH-HHHHTCSCEEECHHHHHHHSC-CCS-SSSSCHHHHHHHHHHHHHHC---SSCEEEECTTCSSSSHHHHHHHH
T ss_pred CHHHHHH-HHHcCCCEEEECcHHHHHhCC-CCC-CCCCCHHHHHHHHHHHHhhc---CCCEEeecCCCCCCCHHHHHHHH
Confidence 3334443 667899999998 777887 543 23445543 34444444 699999888884 343 45
Q ss_pred HHHHhcCCeEeec
Q 029526 133 KGCIERGVRKFNV 145 (192)
Q Consensus 133 ~~~i~~Gi~KINi 145 (192)
++.++.|+.=||+
T Consensus 99 ~~l~~aGaagv~i 111 (275)
T 2ze3_A 99 EHFAALGVAGVNL 111 (275)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCcEEEE
Confidence 6678999999998
No 296
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=76.62 E-value=4.9 Score=35.97 Aligned_cols=66 Identities=17% Similarity=0.270 Sum_probs=48.8
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
+.+.. +.+.|+|.+.+. +.||. +...++.+++|++.+. ++|+++ |.+.+.++.+++.+.|+.=|.+
T Consensus 240 ~~a~~-l~~aGvd~v~i~--~~~G~-----~~~~~e~i~~i~~~~p--~~pvi~--g~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 240 ERVEK-LVKAGVDVIVID--TAHGH-----SRRVIETLEMIKADYP--DLPVVA--GNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp HHHHH-HHHTTCSEEEEC--CSCCS-----SHHHHHHHHHHHHHCT--TSCEEE--EEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHH-HHHhCCCEEEEE--ecCCc-----hHHHHHHHHHHHHHCC--CceEEe--CCcCCHHHHHHHHHcCCCEEEE
Confidence 44444 456799987764 45763 3345788889988873 589877 3467888999999999999887
No 297
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=76.47 E-value=17 Score=25.41 Aligned_cols=70 Identities=13% Similarity=0.155 Sum_probs=50.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++++++.+.++....|++-+.+.- |.. -+++++.|++......+|+++-.+..- .+...++.+.|+.-
T Consensus 38 ~~~~~~a~~~l~~~~~dlii~d~~l---------~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~-~~~~~~~~~~g~~~ 107 (147)
T 2zay_A 38 CGNAIEAVPVAVKTHPHLIITEANM---------PKISGMDLFNSLKKNPQTASIPVIALSGRAT-AKEEAQLLDMGFID 107 (147)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEESCC---------SSSCHHHHHHHHHTSTTTTTSCEEEEESSCC-HHHHHHHHHHTCSE
T ss_pred eCCHHHHHHHHHcCCCCEEEEcCCC---------CCCCHHHHHHHHHcCcccCCCCEEEEeCCCC-HHHHHHHHhCCCCE
Confidence 5788999999999999998887532 111 378889998721112699998877654 56678888888764
Q ss_pred e
Q 029526 143 F 143 (192)
Q Consensus 143 I 143 (192)
+
T Consensus 108 ~ 108 (147)
T 2zay_A 108 F 108 (147)
T ss_dssp E
T ss_pred E
Confidence 3
No 298
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=76.35 E-value=18 Score=25.78 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=50.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++...|++-+.+.- |.. -+++++.|++......+|+++-.+.. ..+...++.+.|+.-
T Consensus 37 ~~~~~~al~~l~~~~~dlii~D~~l---------~~~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~~~~~~~~~g~~~ 106 (154)
T 3gt7_A 37 VRNGREAVRFLSLTRPDLIISDVLM---------PEMDGYALCRWLKGQPDLRTIPVILLTILS-DPRDVVRSLECGADD 106 (154)
T ss_dssp ESSHHHHHHHHTTCCCSEEEEESCC---------SSSCHHHHHHHHHHSTTTTTSCEEEEECCC-SHHHHHHHHHHCCSE
T ss_pred eCCHHHHHHHHHhCCCCEEEEeCCC---------CCCCHHHHHHHHHhCCCcCCCCEEEEECCC-ChHHHHHHHHCCCCE
Confidence 4678999999999999999887521 222 37888899875322368988877655 456688899999754
No 299
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=76.30 E-value=4.5 Score=34.43 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=54.7
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC----HHHHHHHHhhhccCCccEEeec-CCCCCHHHHHHHHhcC
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK----LDLLKDLHALSSKKGVLLVLHG-ASGLSAELIKGCIERG 139 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld----~~~L~~I~~~~~~~~iPLVlHG-gSG~~~e~~~~~i~~G 139 (192)
.+|+.+.+.++..+.|++.+-+.-...... .+..+ ++.+++|++ + ++|+.+-+ +.|++.++.+++.+.|
T Consensus 132 ~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~--~~~~~~~~~~~~i~~vr~-~---~~Pv~vK~v~~g~~~e~a~~~~~~G 205 (332)
T 1vcf_A 132 YGRDDLLRLVEMLEADALAFHVNPLQEAVQ--RGDTDFRGLVERLAELLP-L---PFPVMVKEVGHGLSREAALALRDLP 205 (332)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECCHHHHHHT--TSCCCCTTHHHHHHHHCS-C---SSCEEEECSSSCCCHHHHHHHTTSC
T ss_pred cChHHHHHHHhhcCCCceeeccchHHHHhc--CCCccHHHHHHHHHHHHc-C---CCCEEEEecCCCCCHHHHHHHHHcC
Confidence 678999988888889988776632111111 24455 566777776 5 69999873 5678999999999999
Q ss_pred CeEeec
Q 029526 140 VRKFNV 145 (192)
Q Consensus 140 i~KINi 145 (192)
+.=|-+
T Consensus 206 ~d~I~v 211 (332)
T 1vcf_A 206 LAAVDV 211 (332)
T ss_dssp CSEEEC
T ss_pred CCEEEe
Confidence 999977
No 300
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=76.29 E-value=14 Score=31.35 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=55.0
Q ss_pred hhcCCCEeEe------------eCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 4 IVLGFDSLMV------------DGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 4 i~~GFtSVM~------------D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
=++||+.++. |.-.++++|-+.+++.|++-+. .+.|=+.+-.- -|.+|+++.
T Consensus 46 e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~--~~~vvaD~pfg--------------sY~s~~~a~ 109 (275)
T 3vav_A 46 DRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQP--RALIVADLPFG--------------TYGTPADAF 109 (275)
T ss_dssp HHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCC--SSEEEEECCTT--------------SCSSHHHHH
T ss_pred HHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCC--CCCEEEecCCC--------------CCCCHHHHH
Confidence 3678888865 3345689999999999988553 24444443221 247777764
Q ss_pred ----HHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEee
Q 029526 72 ----EFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLH 122 (192)
Q Consensus 72 ----~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlH 122 (192)
+|+++ |++++=+==| ..-.++++.|.+. +||.+=|
T Consensus 110 ~~a~rl~ka-Ga~aVklEdg-----------~~~~~~i~~l~~~----GIpv~gH 148 (275)
T 3vav_A 110 ASAVKLMRA-GAQMVKFEGG-----------EWLAETVRFLVER----AVPVCAH 148 (275)
T ss_dssp HHHHHHHHT-TCSEEEEECC-----------GGGHHHHHHHHHT----TCCEEEE
T ss_pred HHHHHHHHc-CCCEEEECCc-----------hhHHHHHHHHHHC----CCCEEEe
Confidence 66664 9887765311 1124556666543 7999988
No 301
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=76.25 E-value=28 Score=32.35 Aligned_cols=123 Identities=18% Similarity=0.225 Sum_probs=82.0
Q ss_pred hhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEE
Q 029526 3 AIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDAL 82 (192)
Q Consensus 3 ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~L 82 (192)
-+++|-+-+.+|.++---+--+...+.+.+.-. ++.| |+| .-.+++.|+..+ +.|+|++
T Consensus 289 Lv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p--~~~v------iaG------------NVaT~e~a~~Li-~aGAD~v 347 (556)
T 4af0_A 289 LAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYP--KIDV------IAG------------NVVTREQAAQLI-AAGADGL 347 (556)
T ss_dssp HHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCT--TSEE------EEE------------EECSHHHHHHHH-HHTCSEE
T ss_pred HHhcCCcEEEEeccccccHHHHHHHHHHHhhCC--cceE------Eec------------cccCHHHHHHHH-HcCCCEE
Confidence 368999999999998764444444444433211 2322 222 235677777755 7899999
Q ss_pred EEecCcCCCCCCC-----CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHH
Q 029526 83 AVCIGNVHGKYPS-----SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 83 AvaiGt~HG~y~~-----~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l 149 (192)
=|.||.=--.... +.| .+.-+-+..+..++.++|+.--||-..|-+ +.||+.+|-.=|-+++.|
T Consensus 348 kVGiGpGSiCtTr~v~GvG~P--Q~tAi~~~a~~a~~~~vpvIADGGI~~sGD-i~KAlaaGAd~VMlGsll 416 (556)
T 4af0_A 348 RIGMGSGSICITQEVMAVGRP--QGTAVYAVAEFASRFGIPCIADGGIGNIGH-IAKALALGASAVMMGGLL 416 (556)
T ss_dssp EECSSCSTTBCCTTTCCSCCC--HHHHHHHHHHHHGGGTCCEEEESCCCSHHH-HHHHHHTTCSEEEESTTT
T ss_pred eecCCCCcccccccccCCCCc--HHHHHHHHHHHHHHcCCCEEecCCcCcchH-HHHHhhcCCCEEEEchhh
Confidence 9999864322221 124 344455555555566899999999987765 999999999999988876
No 302
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=76.24 E-value=16 Score=25.19 Aligned_cols=67 Identities=12% Similarity=0.205 Sum_probs=48.8
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++.+++.++++...+|.+=+-+. .|..+ +++++.|++... .+|+++-.+.. ..+...++.+.|+.-
T Consensus 35 ~~~~~~al~~~~~~~~dlvilD~~---------lp~~~g~~~~~~l~~~~~--~~~ii~ls~~~-~~~~~~~~~~~ga~~ 102 (133)
T 3b2n_A 35 TDNGLDAMKLIEEYNPNVVILDIE---------MPGMTGLEVLAEIRKKHL--NIKVIIVTTFK-RPGYFEKAVVNDVDA 102 (133)
T ss_dssp ESCHHHHHHHHHHHCCSEEEECSS---------CSSSCHHHHHHHHHHTTC--SCEEEEEESCC-CHHHHHHHHHTTCSE
T ss_pred cCCHHHHHHHHhhcCCCEEEEecC---------CCCCCHHHHHHHHHHHCC--CCcEEEEecCC-CHHHHHHHHHcCCcE
Confidence 467789999999889998877642 13233 688899987543 68998887665 356678888888754
No 303
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=76.20 E-value=28 Score=27.81 Aligned_cols=142 Identities=8% Similarity=-0.024 Sum_probs=76.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEE-eccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEA-ELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEa-ElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.+-++||+.|-+-...+ ++. .+++.+.+..+|+.|-+ -.+.- +.-........+.......++.++.++-|++
T Consensus 46 ~~~~~G~~~vEl~~~~~--~~~---~~~~~~~l~~~gl~v~~~~~~~~-~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~ 119 (287)
T 3kws_A 46 FMEKLGVVGFEPGGGGL--AGR---VNEIKQALNGRNIKVSAICAGFK-GFILSTDPAIRKECMDTMKEIIAAAGELGST 119 (287)
T ss_dssp HHHHTTCCEEECBSTTC--GGG---HHHHHHHHTTSSCEECEEECCCC-SCTTBSSHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEEecCCch--HHH---HHHHHHHHHHcCCeEEEEecCCC-CcCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 35678999999887754 333 56777888899988753 11110 0000000000011223345667777788999
Q ss_pred EEEEecCcCCCCCCCCCCC--CC----HHHHHHHHhhhccCCccEEee--cC----CCCCHHHHHHHHh---cCCeEeec
Q 029526 81 ALAVCIGNVHGKYPSSGPN--LK----LDLLKDLHALSSKKGVLLVLH--GA----SGLSAELIKGCIE---RGVRKFNV 145 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~--ld----~~~L~~I~~~~~~~~iPLVlH--Gg----SG~~~e~~~~~i~---~Gi~KINi 145 (192)
.+-+..|.. .+....|. -. .+.|+++.+.....+|.|++| .. -..+.+++.+.++ .--.++++
T Consensus 120 ~v~~~~g~~--~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~~~vg~~~ 197 (287)
T 3kws_A 120 GVIIVPAFN--GQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINNPGVRCMG 197 (287)
T ss_dssp EEEECSCCT--TCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHCCTTEEEEE
T ss_pred EEEEecCcC--CcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCeeEEe
Confidence 887754422 22210111 11 344555555555568999999 42 2234555555543 23467888
Q ss_pred chHHHH
Q 029526 146 NTEVRK 151 (192)
Q Consensus 146 ~T~l~~ 151 (192)
+|.-..
T Consensus 198 D~~h~~ 203 (287)
T 3kws_A 198 DFWHMT 203 (287)
T ss_dssp EHHHHH
T ss_pred ehHHHH
Confidence 776543
No 304
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=76.07 E-value=18 Score=25.55 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=51.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++...|.+-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.|+.-
T Consensus 47 ~~~~~~a~~~l~~~~~dlii~d~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~-~~~~~~~~~~~g~~~ 114 (152)
T 3eul_A 47 ADDGAAALELIKAHLPDVALLDYRM---------PGMDGAQVAAAVRSYEL--PTRVLLISAHD-EPAIVYQALQQGAAG 114 (152)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEETTC---------SSSCHHHHHHHHHHTTC--SCEEEEEESCC-CHHHHHHHHHTTCSE
T ss_pred eCCHHHHHHHHHhcCCCEEEEeCCC---------CCCCHHHHHHHHHhcCC--CCeEEEEEccC-CHHHHHHHHHcCCCE
Confidence 5788999999999999999887522 222 3788899987653 68998887654 456678899999764
Q ss_pred e
Q 029526 143 F 143 (192)
Q Consensus 143 I 143 (192)
+
T Consensus 115 ~ 115 (152)
T 3eul_A 115 F 115 (152)
T ss_dssp E
T ss_pred E
Confidence 3
No 305
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=75.89 E-value=3.2 Score=33.23 Aligned_cols=25 Identities=12% Similarity=0.142 Sum_probs=20.6
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCC
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGK 92 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~ 92 (192)
.++.+|+++.|+|+++++..|.|-.
T Consensus 63 ~~~~~~L~~~g~d~iviaCnTa~~~ 87 (226)
T 2zsk_A 63 INAAKALERAGAELIAFAANTPHLV 87 (226)
T ss_dssp HHHHHHHHHHTCSEEEESSSGGGGG
T ss_pred HHHHHHHHHcCCCEEEECCCcHHHH
Confidence 4566677788999999999999953
No 306
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=75.81 E-value=8.5 Score=33.89 Aligned_cols=44 Identities=20% Similarity=0.383 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecc
Q 029526 98 PNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 98 p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
|.+.++.++.|++.+ ++|+++-|. .+.++.+++.+.|+.=|-++
T Consensus 237 ~~~~~~~i~~lr~~~---~~PvivKgv--~~~e~A~~a~~aGad~I~vs 280 (392)
T 2nzl_A 237 PSISWEDIKWLRRLT---SLPIVAKGI--LRGDDAREAVKHGLNGILVS 280 (392)
T ss_dssp TTCCHHHHHHHC--C---CSCEEEEEE--CCHHHHHHHHHTTCCEEEEC
T ss_pred hHHHHHHHHHHHHhh---CCCEEEEec--CCHHHHHHHHHcCCCEEEeC
Confidence 557788888888777 699999976 56888999999999988883
No 307
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=75.80 E-value=19 Score=31.37 Aligned_cols=67 Identities=12% Similarity=-0.071 Sum_probs=50.3
Q ss_pred CHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|+++ -+++++=-- -|.-|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.
T Consensus 222 ~~~~A~~~~~~L~~~~i~~iEeP-----------~~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~a~d 286 (400)
T 4dxk_A 222 QLLPAMQIAKALTPYQTFWHEDP-----------IKMDSLSSLTRYAAVS---PAPISA-SETLGSRWAFRDLLETGAAG 286 (400)
T ss_dssp CHHHHHHHHHHTGGGCCSEEECC-----------BCTTSGGGHHHHHHHC---SSCEEE-CTTCCHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHhhcCCCEEEcC-----------CCcccHHHHHHHHHhC---CCCEEe-cCCcCCHHHHHHHHHcCCCC
Confidence 68899988654 578877621 1334788899999988 699887 66667788999999887 66
Q ss_pred Eeecch
Q 029526 142 KFNVNT 147 (192)
Q Consensus 142 KINi~T 147 (192)
=||+..
T Consensus 287 ~v~~d~ 292 (400)
T 4dxk_A 287 VVMLDI 292 (400)
T ss_dssp EEEECT
T ss_pred EEEeCc
Confidence 777764
No 308
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=75.79 E-value=17 Score=29.16 Aligned_cols=142 Identities=18% Similarity=0.250 Sum_probs=80.3
Q ss_pred hhhhcCCCEeEeeCCCC-CHHHHHHHHHHHHHHHHhCCCeEEEeccccccC--CC--------C-CccccccccCCCHHH
Q 029526 2 EAIVLGFDSLMVDGSHL-PFKDNISHTKYISFLAHSKGMLVEAELGRLSGT--ED--------G-LTVEDYEAKLTDVNQ 69 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l-~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~--e~--------~-~~~~~~~~~~T~pee 69 (192)
.+-++||+.|-+-.... ++. -...+++.+.+.++|+.+-.=-....+. .+ + ......+......++
T Consensus 29 ~~~~~G~~~vEl~~~~~~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 106 (290)
T 3tva_A 29 VAQDLKVPTVQVHAPHPHTRT--REHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKE 106 (290)
T ss_dssp HHHHTTCSEEEEECCCGGGCS--HHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHH
T ss_pred HHHHcCCCEEEecCCCCCcCC--HHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHH
Confidence 46688999999886432 121 2346778888999999887631111110 00 0 000001112334466
Q ss_pred HHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC----HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh---cCCeE
Q 029526 70 AEEFIDETDIDALAVCIGNVHGKYPSSGPNLK----LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE---RGVRK 142 (192)
Q Consensus 70 a~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld----~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~---~Gi~K 142 (192)
+.++.++-|++.+-+..|..... ..-. .+.|+++.+...+.+|.|.+|--... .+++.+.++ .--.+
T Consensus 107 ~i~~a~~lG~~~v~~~~G~~~~~-----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~-~~~~~~l~~~~~~~~~g 180 (290)
T 3tva_A 107 ISDFASWVGCPAIGLHIGFVPES-----SSPDYSELVRVTQDLLTHAANHGQAVHLETGQES-ADHLLEFIEDVNRPNLG 180 (290)
T ss_dssp HHHHHHHHTCSEEEECCCCCCCT-----TSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSC-HHHHHHHHHHHCCTTEE
T ss_pred HHHHHHHcCCCEEEEcCCCCccc-----chHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCC-HHHHHHHHHhcCCCCEE
Confidence 77777888999998765533211 1112 23345555555556899999987644 444554443 24567
Q ss_pred eecchHHHH
Q 029526 143 FNVNTEVRK 151 (192)
Q Consensus 143 INi~T~l~~ 151 (192)
++++|.-..
T Consensus 181 ~~~D~~h~~ 189 (290)
T 3tva_A 181 INFDPANMI 189 (290)
T ss_dssp EEECHHHHH
T ss_pred EEeccHHHH
Confidence 888776544
No 309
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=75.78 E-value=2.2 Score=36.46 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.0
Q ss_pred CCccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 115 KGVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 115 ~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
.+||++||--.|-+.|.+++|++.|.+-|-|+-
T Consensus 79 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDg 111 (288)
T 3q94_A 79 ITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDA 111 (288)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHHHTCSEEEECC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeC
Confidence 379999999999999999999999998888854
No 310
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=75.62 E-value=17 Score=32.00 Aligned_cols=68 Identities=15% Similarity=0.005 Sum_probs=49.4
Q ss_pred CHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|++ +.+++++-= + -|.-|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.
T Consensus 234 ~~~~A~~~~~~Le~~~i~~iEq----------P-~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~ll~~ga~d 298 (422)
T 3tji_A 234 FPQQAVQLAKQLEPFQPYFIED----------I-LPPQQSAWLEQVRQQS---CVPLAL-GELFNNPAEWHDLIVNRRID 298 (422)
T ss_dssp CHHHHHHHHHHHGGGCCSEEEC----------C-SCGGGGGGHHHHHHHC---CCCEEE-CTTCCSGGGTHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhhCCCeEEC----------C-CChhhHHHHHHHHhhC---CCCEEE-eCCcCCHHHHHHHHhcCCCC
Confidence 5889999865 457887741 1 2334788899999887 699876 66666778899999877 66
Q ss_pred EeecchH
Q 029526 142 KFNVNTE 148 (192)
Q Consensus 142 KINi~T~ 148 (192)
=||+...
T Consensus 299 ~v~~k~~ 305 (422)
T 3tji_A 299 FIRCHVS 305 (422)
T ss_dssp EECCCGG
T ss_pred EEecCcc
Confidence 6777543
No 311
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=75.48 E-value=32 Score=28.18 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=64.3
Q ss_pred CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCc
Q 029526 38 GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGV 117 (192)
Q Consensus 38 gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~i 117 (192)
+++|=+|+..-....+.. .. .+|.+..+-.++-|.++|-| =|--+.+.+ .++-|+.|++.+ ++
T Consensus 45 ~~~~IaE~k~aSPskg~i------~~-~~p~~~A~~~~~~GA~~isv--lt~~~~f~G-----~~~~l~~i~~~v---~l 107 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLI------RE-VDPVEAALAYARGGARAVSV--LTEPHRFGG-----SLLDLKRVREAV---DL 107 (254)
T ss_dssp SCEEEEEECSCCTTTCCC------CS-CCHHHHHHHHHHTTCSEEEE--ECCCSSSCC-----CHHHHHHHHHHC---CS
T ss_pred CCcEEeeecCCCcCCCcC------CC-CCHHHHHHHHHHcCCCEEEE--ecchhhhcc-----CHHHHHHHHHhc---CC
Confidence 677888876653221111 13 57766666667899999866 343333332 467788888887 69
Q ss_pred cEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 118 LLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 118 PLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
|+ |-++==+++.|+..+..+|..-|-+.+...
T Consensus 108 Pv-l~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 108 PL-LRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp CE-EEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred CE-EECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 95 445534667799999999999999987654
No 312
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=75.46 E-value=10 Score=29.97 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=53.1
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCC-CCCC--CCCCCHHHHHHHHhhhccCCccEEeecCCC-CCHHH----HHHHHh
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGK-YPSS--GPNLKLDLLKDLHALSSKKGVLLVLHGASG-LSAEL----IKGCIE 137 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~-y~~~--~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG-~~~e~----~~~~i~ 137 (192)
+++++.+.+++.|.|.+-+.....|+. |.+. ...++.+.++++++..++.++.++.|+... ...+. ++.|..
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~ 102 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKA 102 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHH
Confidence 688888889999999988887765432 1100 133556667777777666677776665432 23343 444567
Q ss_pred cCCeEeecch
Q 029526 138 RGVRKFNVNT 147 (192)
Q Consensus 138 ~Gi~KINi~T 147 (192)
+|+..|++.+
T Consensus 103 lGa~~v~~~~ 112 (262)
T 3p6l_A 103 MDLEFITCEP 112 (262)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEecC
Confidence 8888888865
No 313
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=75.25 E-value=14 Score=31.41 Aligned_cols=104 Identities=10% Similarity=0.040 Sum_probs=58.4
Q ss_pred hhhhcCCCEeEeeC-CCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDG-SHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~-S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.++..|+|+|+--+ +..|...+....++..+.+....+. .+..++... .++++..++++ .|++
T Consensus 81 ~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~-~g~~ 144 (458)
T 1gkr_A 81 SAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVD----FALYGGGVP-----------GNLPEIRKMHD-AGAV 144 (458)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSE----EEEEEECCT-----------TCHHHHHHHHH-TTCC
T ss_pred HHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCcee----EEEEeccCC-----------CCHHHHHHHHH-cCCc
Confidence 46789999998655 4444322333333444445543322 222211110 23577888875 4888
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
.+-+.++-..+.+ .+..+.+.|+++.+.....+.|+.+|-.
T Consensus 145 ~i~~~~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 185 (458)
T 1gkr_A 145 GFKSMMAASVPGM---FDAVSDGELFEIFQEIAACGSVIVVHAE 185 (458)
T ss_dssp EEEEESSCSBTTT---BCBCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred EEEEeecccCCCC---cccCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 7765443221110 2456788888887766555799999975
No 314
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=75.19 E-value=3.7 Score=36.64 Aligned_cols=68 Identities=22% Similarity=0.281 Sum_probs=49.5
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecc
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
.+.++..+ +.|+|.+.+. ++||.+ ..-++.+++|++.+. ++|++ +|...+.+..+++++.|+..|.++
T Consensus 235 ~~~a~~l~-~~G~d~ivi~--~a~g~~-----~~~~~~i~~l~~~~p--~~pvi--~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 235 FERAEALF-EAGADAIVID--TAHGHS-----AGVLRKIAEIRAHFP--NRTLI--AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHH-HHTCSEEEEC--CSCTTC-----HHHHHHHHHHHHHCS--SSCEE--EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHH-HcCCCeEEEe--eecCcc-----hhHHHHHHHHHHHCC--CCcEe--CCCccCHHHHHHHHHcCCCEEEEC
Confidence 46666655 5699988754 577632 223567788887762 58988 666677899999999999999776
No 315
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=74.98 E-value=40 Score=29.05 Aligned_cols=115 Identities=12% Similarity=-0.002 Sum_probs=77.1
Q ss_pred hhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 3 AIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 3 ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
+++ .||+.+=+.-...++++.++..+.|.+..-. ++.+=.+ .+ ..+ ++++|.+|+++ .+
T Consensus 159 ~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~-~~~l~vD------aN---------~~~-~~~~A~~~~~~l~~~~ 221 (382)
T 3dgb_A 159 MLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGD-SASVRVD------VN---------QAW-DEAVALRACRILGGNG 221 (382)
T ss_dssp HHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGG-GSEEEEE------CT---------TCB-CHHHHHHHHHHHHTTT
T ss_pred HHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCC-CCeEEEe------CC---------CCC-CHHHHHHHHHHHhhcC
Confidence 344 5899999888777888888887777665432 1221111 01 123 47899988665 46
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
++++- -+ -|.-|++-+++|++.+ ++|+++ |.|=....+++++++.| +.=||+....
T Consensus 222 i~~iE----------qP-~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 278 (382)
T 3dgb_A 222 IDLIE----------QP-ISRNNRAGMVRLNASS---PAPIMA-DESIECVEDAFNLAREGAASVFALKIAK 278 (382)
T ss_dssp CCCEE----------CC-BCTTCHHHHHHHHHHC---SSCEEE-STTCSSHHHHHHHHHHTCCSEEEECHHH
T ss_pred cCeee----------CC-CCccCHHHHHHHHHhC---CCCEEe-CCCcCCHHHHHHHHHcCCCCEEEecccc
Confidence 66663 11 1334899999999887 699887 66777788999999876 6667876433
No 316
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=74.79 E-value=12 Score=31.23 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=68.1
Q ss_pred hhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEE
Q 029526 3 AIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDAL 82 (192)
Q Consensus 3 ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~L 82 (192)
+.+.|++.|.|=|-.-|+ -+.....++++.+++.++.+....| ..+++.+++ +.+.|+|.+
T Consensus 96 ~~~~g~~~i~~~gGe~p~-~~~~~~~~li~~i~~~~~~i~~s~g-----------------~l~~e~l~~-L~~ag~~~v 156 (348)
T 3iix_A 96 AVQFGAKTIVLQSGEDPY-XMPDVISDIVKEIKKMGVAVTLSLG-----------------EWPREYYEK-WKEAGADRY 156 (348)
T ss_dssp HHHTTCSEEEEEESCCGG-GTTHHHHHHHHHHHTTSCEEEEECC-----------------CCCHHHHHH-HHHHTCCEE
T ss_pred HHHCCCCEEEEEeCCCCC-ccHHHHHHHHHHHHhcCceEEEecC-----------------CCCHHHHHH-HHHhCCCEE
Confidence 345688888774433233 3455667778888877666653321 234555555 557899999
Q ss_pred EEecCcCC-CCCCCCCCCCCHHHH-HHHHhhhccCCccEEeecCCCC---CHHHHHH----HHhcCCeEeecc
Q 029526 83 AVCIGNVH-GKYPSSGPNLKLDLL-KDLHALSSKKGVLLVLHGASGL---SAELIKG----CIERGVRKFNVN 146 (192)
Q Consensus 83 AvaiGt~H-G~y~~~~p~ld~~~L-~~I~~~~~~~~iPLVlHGgSG~---~~e~~~~----~i~~Gi~KINi~ 146 (192)
.+++=+.+ -.|+.-.|.-+++.. +.|+. ..+.++++..+.=-|+ ..+++.+ +.++|+..++++
T Consensus 157 ~i~let~~~~~~~~i~~~~~~~~~~~~i~~-~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~ 228 (348)
T 3iix_A 157 LLRHETANPVLHRKLRPDTSFENRLNCLLT-LKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIG 228 (348)
T ss_dssp ECCCBCSCHHHHHHHSTTSCHHHHHHHHHH-HHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCE
T ss_pred eeeeeeCCHHHHHHhCCCcCHHHHHHHHHH-HHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeee
Confidence 88776653 112110122255543 33433 2233666655544444 4555544 456787776664
No 317
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=74.78 E-value=43 Score=29.25 Aligned_cols=67 Identities=7% Similarity=0.028 Sum_probs=49.5
Q ss_pred CHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|++ +.+++++=--+ - |.-|++-+++|++.+ ++|+++ |.|=...++++++++.| +.
T Consensus 225 ~~~~A~~~~~~L~~~~i~~iEqP~--------~--~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~~~d 290 (410)
T 3dip_A 225 GTHAAARICNALADYGVLWVEDPI--------A--KMDNIPAVADLRRQT---RAPICG-GENLAGTRRFHEMLCADAID 290 (410)
T ss_dssp CHHHHHHHHHHGGGGTCSEEECCB--------S--CTTCHHHHHHHHHHH---CCCEEE-CTTCCSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEECCC--------C--CcccHHHHHHHHhhC---CCCEEe-cCCcCCHHHHHHHHHcCCCC
Confidence 5889998865 45788875210 0 223899999999988 699887 56667888999999887 66
Q ss_pred Eeecc
Q 029526 142 KFNVN 146 (192)
Q Consensus 142 KINi~ 146 (192)
=||+.
T Consensus 291 ~v~~k 295 (410)
T 3dip_A 291 FVMLD 295 (410)
T ss_dssp EEEEC
T ss_pred eEeec
Confidence 67774
No 318
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=74.58 E-value=14 Score=31.02 Aligned_cols=93 Identities=10% Similarity=0.018 Sum_probs=62.3
Q ss_pred CeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCcc
Q 029526 39 MLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVL 118 (192)
Q Consensus 39 v~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iP 118 (192)
.+|=+|+=+-....+.. ..-.||.+..+..++-|.++|.| =|--+.+.+ .++-|++|++.+ ++|
T Consensus 59 ~~vIaE~KraSPSkG~i------~~~~dp~~~A~~y~~~GA~~IsV--ltd~~~f~G-----s~~~L~~ir~~v---~lP 122 (272)
T 3tsm_A 59 FALIAEIKKASPSKGLI------RPDFDPPALAKAYEEGGAACLSV--LTDTPSFQG-----APEFLTAARQAC---SLP 122 (272)
T ss_dssp CEEEEEECSEETTTEES------CSSCCHHHHHHHHHHTTCSEEEE--ECCSTTTCC-----CHHHHHHHHHTS---SSC
T ss_pred ceEEEEeccCCCCCCcc------CCCCCHHHHHHHHHHCCCCEEEE--eccccccCC-----CHHHHHHHHHhc---CCC
Confidence 66666665543221111 12358887777777899998854 444443332 567788898887 699
Q ss_pred EEeecCCCCCHHHHHHHHhcCCeEeecchH
Q 029526 119 LVLHGASGLSAELIKGCIERGVRKFNVNTE 148 (192)
Q Consensus 119 LVlHGgSG~~~e~~~~~i~~Gi~KINi~T~ 148 (192)
+..-+ --++..|+.++..+|..-|-+.+.
T Consensus 123 Vl~Kd-fi~d~~qi~ea~~~GAD~VlLi~a 151 (272)
T 3tsm_A 123 ALRKD-FLFDPYQVYEARSWGADCILIIMA 151 (272)
T ss_dssp EEEES-CCCSTHHHHHHHHTTCSEEEEETT
T ss_pred EEECC-ccCCHHHHHHHHHcCCCEEEEccc
Confidence 76444 458888999999999999888763
No 319
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=74.51 E-value=5.3 Score=33.88 Aligned_cols=70 Identities=20% Similarity=0.324 Sum_probs=42.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSK--GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~--gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
+|+++|-+.||+|- ++. ...+++++..+.. .+.+|+- || -+|+.+.+| .+|||
T Consensus 209 eal~aGaD~I~LDn--~~~----~~~~~~v~~l~~~~~~v~ieaS----GG--------------It~~~i~~~-a~tGV 263 (284)
T 1qpo_A 209 AVLPEKPELILLDN--FAV----WQTQTAVQRRDSRAPTVMLESS----GG--------------LSLQTAATY-AETGV 263 (284)
T ss_dssp HHGGGCCSEEEEET--CCH----HHHHHHHHHHHHHCTTCEEEEE----SS--------------CCTTTHHHH-HHTTC
T ss_pred HHHHcCCCEEEECC--CCH----HHHHHHHHHhhccCCCeEEEEE----CC--------------CCHHHHHHH-HhcCC
Confidence 68999999999998 333 3344555554432 4666654 22 134556665 48999
Q ss_pred cEEEEecCc-CCCCCCCCCCCCCHH
Q 029526 80 DALAVCIGN-VHGKYPSSGPNLKLD 103 (192)
Q Consensus 80 D~LAvaiGt-~HG~y~~~~p~ld~~ 103 (192)
|.+. +|. .|. .|.+||.
T Consensus 264 D~is--vG~l~~~-----a~~~D~s 281 (284)
T 1qpo_A 264 DYLA--VGALTHS-----VRVLDIG 281 (284)
T ss_dssp SEEE--CGGGTSS-----BCCCCEE
T ss_pred CEEE--ECHHHcC-----CCCcceE
Confidence 9887 555 332 3666663
No 320
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=74.47 E-value=21 Score=25.58 Aligned_cols=67 Identities=19% Similarity=0.409 Sum_probs=49.9
Q ss_pred CCCHHHHHHHhhhh--CCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 64 LTDVNQAEEFIDET--DIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 64 ~T~peea~~Fv~~T--gvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
.+++++|.+.+++. .+|.+-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.|+
T Consensus 67 ~~~~~~al~~l~~~~~~~dliilD~~l---------~~~~g~~~~~~lr~~~~--~~~ii~ls~~~-~~~~~~~~~~~g~ 134 (157)
T 3hzh_A 67 AADGEEAVIKYKNHYPNIDIVTLXITM---------PKMDGITCLSNIMEFDK--NARVIMISALG-KEQLVKDCLIKGA 134 (157)
T ss_dssp ESSHHHHHHHHHHHGGGCCEEEECSSC---------SSSCHHHHHHHHHHHCT--TCCEEEEESCC-CHHHHHHHHHTTC
T ss_pred ECCHHHHHHHHHhcCCCCCEEEEeccC---------CCccHHHHHHHHHhhCC--CCcEEEEeccC-cHHHHHHHHHcCC
Confidence 56788999999988 88988886521 222 3788899988653 68998887665 5566888999997
Q ss_pred eE
Q 029526 141 RK 142 (192)
Q Consensus 141 ~K 142 (192)
.-
T Consensus 135 ~~ 136 (157)
T 3hzh_A 135 KT 136 (157)
T ss_dssp SE
T ss_pred CE
Confidence 64
No 321
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=74.03 E-value=22 Score=31.99 Aligned_cols=113 Identities=12% Similarity=0.126 Sum_probs=73.8
Q ss_pred hhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++ .||+.+=+.....+.++.++..+.|-+.. . ++.+=.+ .+ ..+ ++++|.+|+++..- .
T Consensus 211 ~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~-p-d~~L~vD------aN---------~~w-~~~~Ai~~~~~Le~-~ 271 (470)
T 3p0w_A 211 ATERYGFADFKLKGGVMPGAEEMEAIAAIKARF-P-HARVTLD------PN---------GAW-SLNEAIALCKGQGH-L 271 (470)
T ss_dssp HHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC-T-TSEEEEE------CT---------TBB-CHHHHHHHHTTCTT-T
T ss_pred HHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHhC-C-CCeEEee------CC---------CCC-CHHHHHHHHHhccc-c
Confidence 455 59999999987778888888777665532 1 2222111 11 123 68999999876531 1
Q ss_pred EEEecCcCCCCCCCC-CCCCC----HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 82 LAVCIGNVHGKYPSS-GPNLK----LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld----~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+ .|-.. -|.-| ++-+++|++.+ ++|++. |-|-....+++++++.| +.=+|+..
T Consensus 272 --l-------~~iEeP~~~~d~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~a~div~~d~ 330 (470)
T 3p0w_A 272 --V-------AYAEDPCGPEAGYSGREVMAEFKRAT---GIPTAT-NMIATDWRQMGHAVQLHAVDIPLADP 330 (470)
T ss_dssp --C-------SEEESCBCCBTTBCHHHHHHHHHHHH---CCCEEE-SSSSCSHHHHHHHHHTTCCSEEBCCH
T ss_pred --c-------eeecCCCChhhccchHHHHHHHHhcC---CCCEEe-CCccCCHHHHHHHHHcCCCCEEEecC
Confidence 1 12111 12334 68889999988 699998 67777888999999887 45556553
No 322
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=73.96 E-value=28 Score=30.46 Aligned_cols=77 Identities=13% Similarity=0.168 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHH
Q 029526 25 SHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDL 104 (192)
Q Consensus 25 ~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~ 104 (192)
..-+++.++|+..|+.+=.|+ -| .++.+|+++.|+|++=|+=++. -||.+
T Consensus 78 e~~~~L~~~~~~~Gi~~~st~-------------------fD-~~svd~l~~~~v~~~KI~S~~~----------~N~pL 127 (350)
T 3g8r_A 78 EQMQKLVAEMKANGFKAICTP-------------------FD-EESVDLIEAHGIEIIKIASCSF----------TDWPL 127 (350)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE-------------------CS-HHHHHHHHHTTCCEEEECSSST----------TCHHH
T ss_pred HHHHHHHHHHHHcCCcEEecc-------------------CC-HHHHHHHHHcCCCEEEECcccc----------cCHHH
Confidence 346789999999998776651 12 3567888899999998875444 47889
Q ss_pred HHHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 105 LKDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 105 L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
|+++.+. +.|+.|==|-. .-+++..|+
T Consensus 128 L~~va~~----gKPviLstGms-tl~Ei~~Av 154 (350)
T 3g8r_A 128 LERIARS----DKPVVASTAGA-RREDIDKVV 154 (350)
T ss_dssp HHHHHTS----CSCEEEECTTC-CHHHHHHHH
T ss_pred HHHHHhh----CCcEEEECCCC-CHHHHHHHH
Confidence 9888753 45655554443 444555543
No 323
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=73.89 E-value=34 Score=27.72 Aligned_cols=130 Identities=12% Similarity=0.186 Sum_probs=72.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCC---CeEEEeccccccCCCC-Cccccc-cccCCCHHHHHHHhhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKG---MLVEAELGRLSGTEDG-LTVEDY-EAKLTDVNQAEEFIDE 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~g---v~VEaElG~i~g~e~~-~~~~~~-~~~~T~peea~~Fv~~ 76 (192)
+.+++|.+-|.+-...+.-.+- .+ +.+..+| +.+--+. .-. .+. +....+ +..-.++.+..+.++.
T Consensus 92 ~~l~~GadkVii~t~a~~~p~l---i~---e~~~~~g~q~iv~~iD~--~~~-~~~~v~~~gw~~~~~~~~~~~~~~~~~ 162 (243)
T 4gj1_A 92 ALLDCGVKRVVIGSMAIKDATL---CL---EILKEFGSEAIVLALDT--ILK-EDYVVAVNAWQEASDKKLMEVLDFYSN 162 (243)
T ss_dssp HHHHTTCSEEEECTTTTTCHHH---HH---HHHHHHCTTTEEEEEEE--EES-SSEEEC--------CCBHHHHHHHHHT
T ss_pred HHHHcCCCEEEEccccccCCch---HH---HHHhcccCceEEEEEEE--EeC-CCCEEEecCceecccchHHHHHHHHhh
Confidence 4688999999998777754432 22 3344444 2222221 100 110 000000 1123457777777778
Q ss_pred hCCcEEEEe-cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHH
Q 029526 77 TDIDALAVC-IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 77 TgvD~LAva-iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l 149 (192)
.|+.-+=+. |- .-|.- .-+|++++++|.+.+. ++|+...||-|..++ |+++ +.++.=+=+++.|
T Consensus 163 ~g~~eil~t~Id-~DGt~----~G~d~~l~~~l~~~~~--~ipviasGGv~~~~D-l~~l-~~~~~gvivg~Al 227 (243)
T 4gj1_A 163 KGLKHILCTDIS-KDGTM----QGVNVRLYKLIHEIFP--NICIQASGGVASLKD-LENL-KGICSGVIVGKAL 227 (243)
T ss_dssp TTCCEEEEEETT-C---------CCCHHHHHHHHHHCT--TSEEEEESCCCSHHH-HHHT-TTTCSEEEECHHH
T ss_pred cCCcEEEeeeec-ccccc----cCCCHHHHHHHHHhcC--CCCEEEEcCCCCHHH-HHHH-HccCchhehHHHH
Confidence 888655443 31 12222 2248999999998763 599999999997766 6665 5556656666665
No 324
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=73.82 E-value=21 Score=25.27 Aligned_cols=66 Identities=20% Similarity=0.297 Sum_probs=49.4
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
.+++++|.+++++..+|++-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.| +.
T Consensus 44 ~~~~~~a~~~l~~~~~dlvi~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~-~~~~~~~~~~~g~~~ 111 (153)
T 3hv2_A 44 ARDATQALQLLASREVDLVISAAHL---------PQMDGPTLLARIHQQYP--STTRILLTGDP-DLKLIAKAINEGEIY 111 (153)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESCC---------SSSCHHHHHHHHHHHCT--TSEEEEECCCC-CHHHHHHHHHTTCCS
T ss_pred ECCHHHHHHHHHcCCCCEEEEeCCC---------CcCcHHHHHHHHHhHCC--CCeEEEEECCC-CHHHHHHHHhCCCcc
Confidence 5788999999999999999887532 222 3788899988643 68988876654 556678888888 54
No 325
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=73.72 E-value=4.6 Score=35.31 Aligned_cols=43 Identities=28% Similarity=0.361 Sum_probs=38.2
Q ss_pred CCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 98 PNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 98 p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
|.++++.+++|++.+ ++|+++-|. .+.++.+++.+.|+..|-+
T Consensus 210 p~~~~~~i~~i~~~~---~~Pv~vkgv--~t~e~a~~a~~aGad~I~v 252 (380)
T 1p4c_A 210 ASFNWEALRWLRDLW---PHKLLVKGL--LSAEDADRCIAEGADGVIL 252 (380)
T ss_dssp TTCCHHHHHHHHHHC---CSEEEEEEE--CCHHHHHHHHHTTCSEEEE
T ss_pred ccccHHHHHHHHHhc---CCCEEEEec--CcHHHHHHHHHcCCCEEEE
Confidence 778999999999988 699999874 6788999999999999988
No 326
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=73.69 E-value=19 Score=24.58 Aligned_cols=68 Identities=10% Similarity=0.163 Sum_probs=47.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++...|.+-+.+.- |.. -++.++.|++......+|+++-.+. +++.+.++.+.|+.-
T Consensus 36 ~~~~~~a~~~l~~~~~dlii~d~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~~~~--~~~~~~~~~~~g~~~ 104 (132)
T 3lte_A 36 AHNGFDAGIKLSTFEPAIMTLDLSM---------PKLDGLDVIRSLRQNKVANQPKILVVSGL--DKAKLQQAVTEGADD 104 (132)
T ss_dssp ESSHHHHHHHHHHTCCSEEEEESCB---------TTBCHHHHHHHHHTTTCSSCCEEEEECCS--CSHHHHHHHHHTCCE
T ss_pred eCCHHHHHHHHHhcCCCEEEEecCC---------CCCCHHHHHHHHHhcCccCCCeEEEEeCC--ChHHHHHHHHhChHH
Confidence 4678899999999999998887521 222 2688888987642124777776543 344788999999754
No 327
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=73.65 E-value=35 Score=28.56 Aligned_cols=110 Identities=16% Similarity=0.198 Sum_probs=72.4
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.++.|.+.+.+=||. |+.+|-.+..+.+++.+....+.|=+=.|. ++.+++. +.+
T Consensus 37 li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~-----------------~~t~~ai~la~~a 99 (301)
T 3m5v_A 37 QIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS-----------------NATHEAVGLAKFA 99 (301)
T ss_dssp HHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC-----------------CCHHHHHHHHHHH
Confidence 467899999988775 578999999999999887434666442221 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCC--CCHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPN--LKLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~--ld~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|.. |. ==++-.++|.+.+ ++|++|. -|..++.+.+.+..+.
T Consensus 100 ~~~Gadavlv~~P----~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 100 KEHGADGILSVAP----YYNK--PTQQGLYEHYKAIAQSV---DIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp HHTTCSEEEEECC----CSSC--CCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHcCCCEEEEcCC----CCCC--CCHHHHHHHHHHHHHhC---CCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 6789999887531 1321 21 1122335566555 7999998 3788999999998776
No 328
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=73.63 E-value=16 Score=30.38 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=53.8
Q ss_pred CCHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 65 TDVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 65 T~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
-++++..+.+++ .|+..+.+.=|. .|.++++.+.+|-+.+++.++.+.+..| .++++.+++..+.|+.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe--------~p~~~~~~~~~li~~i~~~~~~i~~s~g-~l~~e~l~~L~~ag~~ 154 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGE--------DPYXMPDVISDIVKEIKKMGVAVTLSLG-EWPREYYEKWKEAGAD 154 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESC--------CGGGTTHHHHHHHHHHHTTSCEEEEECC-CCCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCC--------CCCccHHHHHHHHHHHHhcCceEEEecC-CCCHHHHHHHHHhCCC
Confidence 378888877654 688877765221 2677767666665555444577777766 4789999999999999
Q ss_pred EeecchHH
Q 029526 142 KFNVNTEV 149 (192)
Q Consensus 142 KINi~T~l 149 (192)
.++++=+.
T Consensus 155 ~v~i~let 162 (348)
T 3iix_A 155 RYLLRHET 162 (348)
T ss_dssp EEECCCBC
T ss_pred EEeeeeee
Confidence 98876443
No 329
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=73.40 E-value=15 Score=29.10 Aligned_cols=65 Identities=5% Similarity=0.072 Sum_probs=45.6
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEE---eec--C----CCCCHHHHHHHH
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLV---LHG--A----SGLSAELIKGCI 136 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLV---lHG--g----SG~~~e~~~~~i 136 (192)
++.+..+.+.+.|++++-+. .++.++.|++.+ ++|++ .++ + .+-+.++++.++
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~---------------~~~~i~~i~~~~---~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~ 98 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN---------------SVRDIKEIQAIT---DLPIIGIIKKDYPPQEPFITATMTEVDQLA 98 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE---------------SHHHHHHHHTTC---CSCEEEECBCCCTTSCCCBSCSHHHHHHHH
T ss_pred hHHHHHHHHHHCCCcEeecC---------------CHHHHHHHHHhC---CCCEEeeEcCCCCccccccCChHHHHHHHH
Confidence 44555666778899987542 135688888877 68884 121 2 234779999999
Q ss_pred hcCCeEeecchH
Q 029526 137 ERGVRKFNVNTE 148 (192)
Q Consensus 137 ~~Gi~KINi~T~ 148 (192)
+.|...|++++.
T Consensus 99 ~~Gad~V~l~~~ 110 (234)
T 1yxy_A 99 ALNIAVIAMDCT 110 (234)
T ss_dssp TTTCSEEEEECC
T ss_pred HcCCCEEEEccc
Confidence 999999998664
No 330
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=73.39 E-value=7 Score=31.30 Aligned_cols=139 Identities=12% Similarity=0.110 Sum_probs=78.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEE-ec--cccccCCCCCc--cccccccCCCHHHHHHHhhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEA-EL--GRLSGTEDGLT--VEDYEAKLTDVNQAEEFIDE 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEa-El--G~i~g~e~~~~--~~~~~~~~T~peea~~Fv~~ 76 (192)
.+-++||+.|-+.. |++.. .+++.+.+.++|+.+-+ -. +.....+.+.. ....+......+++.++.++
T Consensus 31 ~~~~~G~~~vEl~~---~~~~~---~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~ 104 (269)
T 3ngf_A 31 LAAEAGFGGVEFLF---PYDFD---ADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALA 104 (269)
T ss_dssp HHHHTTCSEEECSC---CTTSC---HHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEecC---CccCC---HHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 45679999998875 44433 57888889999998865 21 11111111000 00011123345667777788
Q ss_pred hCCcEEEEecCcCCCCCCCCC-CCCC----HHHHHHHHhhhccCCccEEee--------cCCCCCHHHHHHHHhc---CC
Q 029526 77 TDIDALAVCIGNVHGKYPSSG-PNLK----LDLLKDLHALSSKKGVLLVLH--------GASGLSAELIKGCIER---GV 140 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~-p~ld----~~~L~~I~~~~~~~~iPLVlH--------GgSG~~~e~~~~~i~~---Gi 140 (192)
.|++.+-+..| . +.+. ..-. .+.|+++.+...+.+|.|++| |....+.+++.+.++. --
T Consensus 105 lGa~~v~~~~g-~----~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~~~~~~~~~~~l~~~v~~~~ 179 (269)
T 3ngf_A 105 LDCRTLHAMSG-I----TEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGYFIVHQLEAVGLVKRVNRPN 179 (269)
T ss_dssp TTCCEEECCBC-B----CTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCCHHHHHHHHHHHCCTT
T ss_pred cCCCEEEEccC-C----CCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccchhcCHHHHHHHHHHhCCCC
Confidence 89999876544 2 1110 1111 334555665555568999998 3333455556555442 34
Q ss_pred eEeecchHHHH
Q 029526 141 RKFNVNTEVRK 151 (192)
Q Consensus 141 ~KINi~T~l~~ 151 (192)
.+++++|.-..
T Consensus 180 vg~~~D~~h~~ 190 (269)
T 3ngf_A 180 VAVQLDLYHAQ 190 (269)
T ss_dssp EEEEEEHHHHH
T ss_pred CCeEEEhhhHH
Confidence 67888876544
No 331
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=73.07 E-value=43 Score=28.55 Aligned_cols=115 Identities=10% Similarity=0.039 Sum_probs=69.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---- 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---- 77 (192)
++++.||+.+=+.-.. +++++++..+.+.+..-. ++.+=.+ . ...| ++++|.+|+++.
T Consensus 154 ~~~~~G~~~~KiKvG~-~~~~d~~~v~avr~a~g~-~~~l~vD--------------a-N~~~-~~~~a~~~~~~l~~~~ 215 (372)
T 3cyj_A 154 GWAAAGIPRVKMKVGR-EPEKDPERVRAAREAIGE-SVELMVD--------------A-NGAY-TRKQALYWAGAFAREA 215 (372)
T ss_dssp HHHHTTCCEEEEECCS-SGGGHHHHHHHHHHHHCT-TSEEEEE--------------C-TTCS-CHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCC-CHHHHHHHHHHHHHHhCC-CCeEEEE--------------C-CCCC-CHHHHHHHHHHHHhhc
Confidence 3456788887776443 566677666666554311 1111111 0 1123 588999987653
Q ss_pred CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchH
Q 029526 78 DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTE 148 (192)
Q Consensus 78 gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~ 148 (192)
++.++= ..-|.-|++-++++++.++ .++|+++ |-|=....+++++ ...+.=||+...
T Consensus 216 ~i~~iE-----------qP~~~~d~~~~~~l~~~~~-~~ipIa~-dE~~~~~~~~~~~-~~a~d~i~ik~~ 272 (372)
T 3cyj_A 216 GISYLE-----------EPVSSEDREGLRLLRDRGP-GGVAIAA-GEYEWTLPQLHDL-AGCVDILQADVT 272 (372)
T ss_dssp CCCEEE-----------CSSCTTCHHHHHHHHHHSC-TTCEEEE-CTTCCSHHHHHHH-HTTCSEEEECTT
T ss_pred CCcEEE-----------CCCCcccHHHHHHHHHhCC-CCCCEEC-CCCccCHHHHHHH-hCCCCEEecCch
Confidence 555443 1023448999999998872 0179886 5666677889998 777888888543
No 332
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=73.02 E-value=9.8 Score=31.02 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=59.7
Q ss_pred cccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 61 EAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 61 ~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
...+++.+++.+.+ +.|+|+|=+-| .-|.|.+ .-.+-++.++.|++.+ +.|+..|==.--|+..++.+.+.|.
T Consensus 9 a~D~~~l~~~i~~~-~~gad~lHvDv--mDG~fvp-n~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~i~~~~~aGA 81 (231)
T 3ctl_A 9 CMDLLKFKEQIEFI-DSHADYFHIDI--MDGHFVP-NLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDYIAQLARAGA 81 (231)
T ss_dssp GSCGGGHHHHHHHH-HTTCSCEEEEE--ECSSSSS-CCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGTHHHHHHHTC
T ss_pred hCChhhHHHHHHHH-HcCCCEEEEEE--EeCccCc-cchhcHHHHHHHHhcc---CCcEEEEEEecCHHHHHHHHHHcCC
Confidence 34578888888989 99999975442 3555654 2445678899999876 5888888877777777888888888
Q ss_pred eEeecchHH
Q 029526 141 RKFNVNTEV 149 (192)
Q Consensus 141 ~KINi~T~l 149 (192)
.-|-+.-+.
T Consensus 82 d~itvh~Ea 90 (231)
T 3ctl_A 82 DFITLHPET 90 (231)
T ss_dssp SEEEECGGG
T ss_pred CEEEECccc
Confidence 777654333
No 333
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=72.92 E-value=34 Score=28.96 Aligned_cols=37 Identities=3% Similarity=-0.087 Sum_probs=25.6
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHh-CC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHS-KG 38 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~-~g 38 (192)
.+++.|+|+|+-=....|.+...+....+.+.+.. .|
T Consensus 81 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (376)
T 1o12_A 81 FLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPS 118 (376)
T ss_dssp HHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCC
Confidence 57889999987445566777665555666677665 35
No 334
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=72.70 E-value=5.6 Score=35.67 Aligned_cols=81 Identities=12% Similarity=0.172 Sum_probs=57.0
Q ss_pred HHHHHHHhhhhCCcEEEEecCcC-----------CCCCCCCCC--CCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHH
Q 029526 67 VNQAEEFIDETDIDALAVCIGNV-----------HGKYPSSGP--NLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIK 133 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~-----------HG~y~~~~p--~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~ 133 (192)
..+..+-+++.|+|.|.++-.|. -|.|.+ .| .+.++.+.+|++.+.. ++|++-=||-..+ ++..
T Consensus 285 i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG-~a~~p~al~~I~~v~~~v~~-~iPIIg~GGI~s~-eDa~ 361 (415)
T 3i65_A 285 KKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSG-AKLKDISTKFICEMYNYTNK-QIPIIASGGIFSG-LDAL 361 (415)
T ss_dssp HHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEE-GGGHHHHHHHHHHHHHHTTT-CSCEEECSSCCSH-HHHH
T ss_pred HHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCC-ccchHHHHHHHHHHHHHhCC-CCCEEEECCCCCH-HHHH
Confidence 34455556789999998765443 344543 12 1335778888887731 4999988887665 5577
Q ss_pred HHHhcCCeEeecchHHH
Q 029526 134 GCIERGVRKFNVNTEVR 150 (192)
Q Consensus 134 ~~i~~Gi~KINi~T~l~ 150 (192)
+++..|..=|-++|.+.
T Consensus 362 e~l~aGAd~VqIgra~l 378 (415)
T 3i65_A 362 EKIEAGASVCQLYSCLV 378 (415)
T ss_dssp HHHHHTEEEEEESHHHH
T ss_pred HHHHcCCCEEEEcHHHH
Confidence 88889999999999986
No 335
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=72.58 E-value=43 Score=28.25 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=71.2
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhh----
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDET---- 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~T---- 77 (192)
++++.||+.+=+.-..-++++.++..+.|.+..-. ++.+=. |. ...+ ++++|.+|+++.
T Consensus 126 ~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~g~-~~~L~v---------Da------N~~~-~~~~A~~~~~~l~~~~ 188 (332)
T 2ozt_A 126 QSWQRGQTTFKWKVGVMSPEEEQAILKALLAALPP-GAKLRL---------DA------NGSW-DRATANRWFAWLDRHG 188 (332)
T ss_dssp HHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHSCT-TCEEEE---------EC------TTCC-CHHHHHHHHHHHHHHC
T ss_pred HHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHcCC-CCEEEE---------cc------cCCC-CHHHHHHHHHHHHhhc
Confidence 35677888888876655677777666665543211 111111 10 0123 689999997653
Q ss_pred --CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE-eecc
Q 029526 78 --DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK-FNVN 146 (192)
Q Consensus 78 --gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K-INi~ 146 (192)
++.++= ..-|.-|++-++++++.+ ++|+++ |-|=....+++++++.|.+- +|+.
T Consensus 189 ~~~i~~iE-----------qP~~~~d~~~~~~l~~~~---~ipIa~-dEs~~~~~~~~~~~~~~a~~~i~ik 245 (332)
T 2ozt_A 189 NGKIEYVE-----------QPLPPDQWQALLSLAQTV---TTAIAL-DESVVSAAEVQRWVDRGWPGFFVIK 245 (332)
T ss_dssp CTTEEEEE-----------CCSCTTCHHHHHHHHHHC---SSCEEE-STTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred cCCcceeE-----------CCCCCCCHHHHHHHHHhC---CCCEEe-CCCCCCHHHHHHHHHhCCCCEEEEC
Confidence 444332 112345899999999887 699887 45667888999999998655 4764
No 336
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=72.37 E-value=29 Score=30.95 Aligned_cols=113 Identities=9% Similarity=0.054 Sum_probs=72.1
Q ss_pred hhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++ .||+.+=+.....+.++.++..+.|-+... ++.+=. | .+.--++++|.+|+++..- .
T Consensus 196 ~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~p--d~~L~v---------D-------aN~~w~~~~A~~~~~~L~~-~ 256 (455)
T 3pfr_A 196 SKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFP--DARITL---------D-------PNGCWSLDEAIQLCKGLND-V 256 (455)
T ss_dssp HHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCT--TCCEEE---------E-------CTTBSCHHHHHHHHTTCTT-T
T ss_pred HHHhCCCCEEEEcCCCCCHHHHHHHHHHHHHhCC--CCeEee---------c-------CCCCCCHHHHHHHHHhhcc-c
Confidence 344 599999999877788888887766655321 111110 1 0112368999999876531 1
Q ss_pred EEEecCcCCCCCCCC-CCCCC----HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 82 LAVCIGNVHGKYPSS-GPNLK----LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld----~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+ .|-.. -|.-| ++.+++|++.+ ++|+++ |-|-....+++++++.| +.=+++..
T Consensus 257 --l-------~~iEeP~~~~d~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~di~~~d~ 315 (455)
T 3pfr_A 257 --L-------TYAEDPCIGENGYSGREIMAEFRRRT---GIPTAT-NMIATNWREMCHAIMLQSVDIPLADP 315 (455)
T ss_dssp --C-------SEEESCBCCBTTBCHHHHHHHHHHHH---CCCEEE-SSSCCSHHHHHHHHHHTCCSEEBCCH
T ss_pred --c-------eeeecCCChhhccchHHHHHHHHhcC---CCCEEe-CCCcCCHHHHHHHHHcCCCCEEEecC
Confidence 1 12111 12234 68899999988 699998 66777888999999887 44455543
No 337
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=72.33 E-value=24 Score=31.40 Aligned_cols=113 Identities=8% Similarity=0.112 Sum_probs=73.2
Q ss_pred hhh-cCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 3 AIV-LGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 3 ai~-~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+++ .||+.+=+.....+.++.++..+.|-+.. . ++.+=.+ .+ ..+ ++++|.+|+++.. +.
T Consensus 193 ~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-p-d~~L~vD------aN---------~~w-~~~~A~~~~~~L~-~~ 253 (450)
T 3mzn_A 193 AYDRYGFKDFKLKGGVLRGEEEADCIRALHEAF-P-EARLALD------PN---------GAW-KLDEAVRVLEPIK-HL 253 (450)
T ss_dssp HHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC-T-TSEEEEE------CT---------TCB-CHHHHHHHHGGGG-GG
T ss_pred HHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhC-C-CCeEEEE------CC---------CCC-CHHHHHHHHHHhh-hc
Confidence 455 59999999988778888888777765532 1 2222111 11 123 5899999987653 11
Q ss_pred EEEecCcCCCCCCCC-CCCCC----HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 82 LAVCIGNVHGKYPSS-GPNLK----LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 82 LAvaiGt~HG~y~~~-~p~ld----~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+ .|-.. -|.-| ++.+++|++.+ ++|+++ |-|-....+++++++.| +.=+++..
T Consensus 254 --i-------~~iEeP~~~~d~~~~~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~di~~~d~ 312 (450)
T 3mzn_A 254 --L-------SYAEDPCGQEGGFSGRETMAEFKKRT---GLPTAT-NMIATDYKQLQYAVQLNSVDIPLADC 312 (450)
T ss_dssp --C-------SEEESSBCCBTTBCHHHHHHHHHHHH---CCCEEE-SSSSSSHHHHHHHHHHTCCSEEBCCH
T ss_pred --c-------ceeeCCCCcccccchHHHHHHHHHhc---CCCEEe-CCccCCHHHHHHHHHcCCCCEEEecC
Confidence 1 12111 12334 68899999988 699998 56777888999999887 44455543
No 338
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=72.09 E-value=4.7 Score=36.49 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=47.7
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
.+.++..+ +.|+|.+. |++.||. +..-++.+++|++... ++|++. |...+.++.+++++.|+.-|-+
T Consensus 231 ~~~a~~l~-~aG~d~I~--id~a~g~-----~~~~~~~v~~i~~~~p--~~~Vi~--g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALV-AAGVDVVV--VDTAHGH-----SKGVIERVRWVKQTFP--DVQVIG--GNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHH-HTTCSEEE--EECSCCS-----BHHHHHHHHHHHHHCT--TSEEEE--EEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHh-hcccceEE--ecccCCc-----chhHHHHHHHHHHHCC--CceEEE--eeeCcHHHHHHHHHcCCCEEEE
Confidence 45666656 45999665 4567762 2234677888887763 578877 4567789999999999988876
No 339
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=72.03 E-value=22 Score=27.89 Aligned_cols=21 Identities=0% Similarity=0.118 Sum_probs=11.7
Q ss_pred CHHHHHHHhhhhCCcEEEEec
Q 029526 66 DVNQAEEFIDETDIDALAVCI 86 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvai 86 (192)
+++++.+++++.|.|.+-+..
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~ 40 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRN 40 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEET
T ss_pred CHHHHHHHHHHcCCCEEEeec
Confidence 455555555555555555554
No 340
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=71.96 E-value=7.4 Score=31.43 Aligned_cols=79 Identities=13% Similarity=0.220 Sum_probs=54.3
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+.+..+..+.+++.|+|++=+-+ .-|.|-+ ....-++.+++|++.+ +.|+..|==.--|++.++.+.+.|..=
T Consensus 15 D~~~l~~~i~~~~~~Gad~ihldi--~DG~fvp-~~~~g~~~v~~lr~~~---~~~~~vhlmv~dp~~~i~~~~~aGadg 88 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGADWIHVDV--MDGRFVP-NITIGPLIVDAIRPLT---KKTLDVHLMIVEPEKYVEDFAKAGADI 88 (230)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEE--EBSSSSS-CBCBCHHHHHHHGGGC---CSEEEEEEESSSGGGTHHHHHHHTCSE
T ss_pred CHhHHHHHHHHHHHcCCCEEEEEE--EecCCCc-chhhhHHHHHHHHhhc---CCcEEEEEEccCHHHHHHHHHHcCCCE
Confidence 366777888888899999976555 4555543 2444568889998876 467776655555666777777777777
Q ss_pred eecch
Q 029526 143 FNVNT 147 (192)
Q Consensus 143 INi~T 147 (192)
|-+.-
T Consensus 89 v~vh~ 93 (230)
T 1tqj_A 89 ISVHV 93 (230)
T ss_dssp EEEEC
T ss_pred EEECc
Confidence 74443
No 341
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=71.84 E-value=5.4 Score=36.17 Aligned_cols=68 Identities=21% Similarity=0.326 Sum_probs=48.9
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
+.+.++..++ .|+|.+. |++.||. +..-++.+++|++... ++|++. |...+.++.+++++.|+.-|-+
T Consensus 232 ~~~~a~~l~~-aG~d~I~--id~a~g~-----~~~~~~~i~~ir~~~p--~~~Vi~--g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 232 NEERVKALVE-AGVDVLL--IDSSHGH-----SEGVLQRIRETRAAYP--HLEIIG--GNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp CHHHHHHHHH-TTCSEEE--EECSCTT-----SHHHHHHHHHHHHHCT--TCCEEE--EEECSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHh-ccCceEE--ecccccc-----chHHHHHHHHHHHHCC--CceEEE--cccCcHHHHHHHHHhCCCEEEE
Confidence 4567777665 5999665 5566752 2334677888888763 588877 5567779999999999888765
No 342
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=71.84 E-value=5.4 Score=32.01 Aligned_cols=139 Identities=12% Similarity=0.075 Sum_probs=77.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHH-----HHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNI-----SHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE 76 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi-----~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~ 76 (192)
.+-++||+.|-+-+ +...++ ...+++.+.+..+|+.+-+=-.... ..+. ...+......+++.++..+
T Consensus 23 ~~~~~G~~~vEl~~---~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-~~~~---~~~~~~~~~~~~~i~~A~~ 95 (286)
T 3dx5_A 23 FAYENGFEGIELWG---THAQNLYMQEYETTERELNCLKDKTLEITMISDYLD-ISLS---ADFEKTIEKCEQLAILANW 95 (286)
T ss_dssp HHHHTTCCEEEEEH---HHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCC-CSTT---SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEcc---cccccccccCHHHHHHHHHHHHHcCCeEEEEecCCC-CCCc---hhHHHHHHHHHHHHHHHHH
Confidence 46688999999843 222333 4567888899999998875211111 1110 0111123344667777888
Q ss_pred hCCcEEEEecCcCCCCCCCCCCCCC----HHHHHHHHhhhccCCccEEeecCCC---CCHHHHHHHHh---cCCeEeecc
Q 029526 77 TDIDALAVCIGNVHGKYPSSGPNLK----LDLLKDLHALSSKKGVLLVLHGASG---LSAELIKGCIE---RGVRKFNVN 146 (192)
Q Consensus 77 TgvD~LAvaiGt~HG~y~~~~p~ld----~~~L~~I~~~~~~~~iPLVlHGgSG---~~~e~~~~~i~---~Gi~KINi~ 146 (192)
-|+..+-+-.|...... ...-. .+.|+++.+...+.+|.|++|=-.+ .+.+++.+.++ .--.+++++
T Consensus 96 lG~~~v~~~~g~~~~~~---~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~~D 172 (286)
T 3dx5_A 96 FKTNKIRTFAGQKGSAD---FSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDHPNLKINLD 172 (286)
T ss_dssp HTCCEEEECSCSSCGGG---SCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTTEEEEEE
T ss_pred hCCCEEEEcCCCCCccc---CcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCCCCeEEEec
Confidence 99999987544332110 01111 2445555555545589999986433 23455555443 235677777
Q ss_pred hHHH
Q 029526 147 TEVR 150 (192)
Q Consensus 147 T~l~ 150 (192)
|.-.
T Consensus 173 ~~h~ 176 (286)
T 3dx5_A 173 FLHI 176 (286)
T ss_dssp HHHH
T ss_pred cccH
Confidence 7653
No 343
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=70.86 E-value=26 Score=29.80 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=66.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHh---hhhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFI---DETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv---~~Tg 78 (192)
++++.||+.+-+..+. ++.++..+.+.+..-. ++.+= | ..+ ..| ++++ .+|+ ++.+
T Consensus 151 ~~~~~Gf~~vKik~~~---~~~~e~v~avr~~~g~-~~~l~-----v-Dan---------~~~-~~~~-~~~~~~l~~~~ 209 (368)
T 1sjd_A 151 GYLDEGYVRIKLKIEP---GWDVEPVRAVRERFGD-DVLLQ-----V-DAN---------TAY-TLGD-APQLARLDPFG 209 (368)
T ss_dssp HHHHHTCSEEEEECBT---TBSHHHHHHHHHHHCT-TSEEE-----E-ECT---------TCC-CGGG-HHHHHTTGGGC
T ss_pred HHHHhCccEEEEecCc---hhHHHHHHHHHHhcCC-CceEE-----E-ecc---------CCC-CHHH-HHHHHHHHhcC
Confidence 4677899999887642 4444455544443311 23221 1 011 123 3555 6675 4568
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
++++- .+ -|.-|++-+++|++.+ ++|++.-+. =...++++++++.| +.=||+.
T Consensus 210 i~~iE----------~P-~~~~~~~~~~~l~~~~---~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 210 LLLIE----------QP-LEEEDVLGHAELARRI---QTPICLDES-IVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp CSEEE----------CC-SCTTCHHHHHHHHTTC---SSCEEESTT-CCSHHHHHHHHHTTCCSEEEEC
T ss_pred CCeEe----------CC-CChhhHHHHHHHHHhC---CCCEEECCC-cCCHHHHHHHHHcCCCCEEEec
Confidence 88764 11 2345899999999887 699887654 46778999999887 5556764
No 344
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=70.84 E-value=29 Score=30.28 Aligned_cols=76 Identities=24% Similarity=0.275 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHH
Q 029526 26 HTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLL 105 (192)
Q Consensus 26 ~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L 105 (192)
.-+++.++|+..|+.+=.|+ -| .++.+|+++-++|++=|+=++. -||++|
T Consensus 92 ~~~~L~~~~~~~Gi~~~st~-------------------~d-~~svd~l~~~~v~~~KI~S~~~----------~n~~LL 141 (349)
T 2wqp_A 92 DEIKLKEYVESKGMIFISTL-------------------FS-RAAALRLQRMDIPAYKIGSGEC----------NNYPLI 141 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEE-------------------CS-HHHHHHHHHHTCSCEEECGGGT----------TCHHHH
T ss_pred HHHHHHHHHHHhCCeEEEee-------------------CC-HHHHHHHHhcCCCEEEECcccc----------cCHHHH
Confidence 35789999999998876651 22 3566788889999998875554 379999
Q ss_pred HHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 106 KDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 106 ~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
+++.+. +.|+.|==|-. .-+++..|+
T Consensus 142 ~~va~~----gkPviLstGma-t~~Ei~~Av 167 (349)
T 2wqp_A 142 KLVASF----GKPIILSTGMN-SIESIKKSV 167 (349)
T ss_dssp HHHHTT----CSCEEEECTTC-CHHHHHHHH
T ss_pred HHHHhc----CCeEEEECCCC-CHHHHHHHH
Confidence 988763 57777755544 566666665
No 345
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=70.83 E-value=21 Score=24.04 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=47.3
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.++.+++.+.++....|.+-+-+.- |.. -+++++.|++... .+|+++-.++. +.+...++.+.|+.
T Consensus 33 ~~~~~~a~~~~~~~~~dlvl~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~-~~~~~~~~~~~g~~ 99 (124)
T 1srr_A 33 AANGLQALDIVTKERPDLVLLDMKI---------PGMDGIEILKRMKVIDE--NIRVIIMTAYG-ELDMIQESKELGAL 99 (124)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEESCC---------TTCCHHHHHHHHHHHCT--TCEEEEEESSC-CHHHHHHHHHHTCC
T ss_pred eCCHHHHHHHHhccCCCEEEEecCC---------CCCCHHHHHHHHHHhCC--CCCEEEEEccC-chHHHHHHHhcChH
Confidence 4677899999988889988887521 222 2678888987642 68998887665 45567788888854
No 346
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=70.77 E-value=24 Score=27.94 Aligned_cols=123 Identities=13% Similarity=0.144 Sum_probs=74.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEecc-ccccCCCCCccccccccC-CCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELG-RLSGTEDGLTVEDYEAKL-TDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG-~i~g~e~~~~~~~~~~~~-T~peea~~Fv~~Tgv 79 (192)
.|-++||+.|-+-...++-.+ ..+++.+.+.++|+.|-.-.. .+.. .+ ..+ ...+++.++.++-|+
T Consensus 31 ~a~~~G~~~vEl~~~~~~~~~---~~~~~~~~l~~~gl~i~~~~~~~~~~-~~--------~~~~~~~~~~i~~A~~lGa 98 (264)
T 1yx1_A 31 LLAMAGAQRVELREELFAGPP---DTEALTAAIQLQGLECVFSSPLELWR-ED--------GQLNPELEPTLRRAEACGA 98 (264)
T ss_dssp HHHHHTCSEEEEEGGGCSSCC---CHHHHHHHHHHTTCEEEEEEEEEEEC-TT--------SSBCTTHHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEEEHHhcCCCH---HHHHHHHHHHHcCCEEEEecchhhcC-Cc--------hhHHHHHHHHHHHHHHcCC
Confidence 466889999988543222111 356788888899988743211 1101 01 123 677899999999999
Q ss_pred cEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCC---CCHHHHHHHHh------cCCeEeecch
Q 029526 80 DALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASG---LSAELIKGCIE------RGVRKFNVNT 147 (192)
Q Consensus 80 D~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG---~~~e~~~~~i~------~Gi~KINi~T 147 (192)
..+-+..|... . .+ .+. ++.+...+.++.|++|=-.+ .+.+++.+.++ .. .+++++|
T Consensus 99 ~~v~~~~g~~~----~-~~--~l~---~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~ 164 (264)
T 1yx1_A 99 GWLKVSLGLLP----E-QP--DLA---ALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDI 164 (264)
T ss_dssp SEEEEEEECCC----S-SC--CHH---HHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEET
T ss_pred CEEEEecCCCC----c-HH--HHH---HHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEeh
Confidence 99988766432 2 12 444 44444444479999974322 13355555543 24 7889988
No 347
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.76 E-value=39 Score=28.07 Aligned_cols=109 Identities=18% Similarity=0.179 Sum_probs=71.4
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.++.|.+.+.+=||. |+.+|-.+..+.+++.+.. .+.|=+= +|+ ++.+++. +++
T Consensus 31 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaG---vg~--------------~~t~~ai~la~~a 92 (291)
T 3tak_A 31 HIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAG---TGA--------------NSTREAIELTKAA 92 (291)
T ss_dssp HHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEE---CCC--------------SSHHHHHHHHHHH
T ss_pred HHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEe---CCC--------------CCHHHHHHHHHHH
Confidence 467899999888876 4789999999999998864 3555331 211 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCC--CHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNL--KLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~l--d~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|.. |.- =++-.++|.+.+ ++|++|+ -|..++.+.+.+..+.
T Consensus 93 ~~~Gadavlv~~P----~y~~--~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 154 (291)
T 3tak_A 93 KDLGADAALLVTP----YYNK--PTQEGLYQHYKAIAEAV---ELPLILYNVPGRTGVDLSNDTAVRLAEI 154 (291)
T ss_dssp HHHTCSEEEEECC----CSSC--CCHHHHHHHHHHHHHHC---CSCEEEEECHHHHSCCCCHHHHHHHTTS
T ss_pred HhcCCCEEEEcCC----CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEecccccCCCCCHHHHHHHHcC
Confidence 6789998876521 1321 211 123345566666 7999998 5788999999988754
No 348
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=70.57 E-value=24 Score=24.46 Aligned_cols=67 Identities=12% Similarity=0.281 Sum_probs=48.8
Q ss_pred CCCHHHHHHHhh--hhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 64 LTDVNQAEEFID--ETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 64 ~T~peea~~Fv~--~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
.+++++|.+++. ...+|.+-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.|+
T Consensus 33 ~~~~~~a~~~~~~~~~~~dlvi~d~~l---------~~~~g~~~~~~l~~~~~--~~~ii~ls~~~-~~~~~~~~~~~g~ 100 (143)
T 3jte_A 33 ASSSTEGLRIFTENCNSIDVVITDMKM---------PKLSGMDILREIKKITP--HMAVIILTGHG-DLDNAILAMKEGA 100 (143)
T ss_dssp ESSHHHHHHHHHHTTTTCCEEEEESCC---------SSSCHHHHHHHHHHHCT--TCEEEEEECTT-CHHHHHHHHHTTC
T ss_pred eCCHHHHHHHHHhCCCCCCEEEEeCCC---------CCCcHHHHHHHHHHhCC--CCeEEEEECCC-CHHHHHHHHHhCc
Confidence 477899999998 5689998887521 222 3688899988653 68988886654 5566888999996
Q ss_pred eE
Q 029526 141 RK 142 (192)
Q Consensus 141 ~K 142 (192)
.-
T Consensus 101 ~~ 102 (143)
T 3jte_A 101 FE 102 (143)
T ss_dssp SE
T ss_pred ce
Confidence 54
No 349
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=70.43 E-value=23 Score=24.31 Aligned_cols=68 Identities=21% Similarity=0.250 Sum_probs=50.3
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
..+++++|.+.+++...|.+-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.|+.
T Consensus 36 ~~~~~~~a~~~l~~~~~dlvi~d~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~-~~~~~~~~~~~g~~ 103 (137)
T 3hdg_A 36 SAGDGEEGERLFGLHAPDVIITDIRM---------PKLGGLEMLDRIKAGGA--KPYVIVISAFS-EMKYFIKAIELGVH 103 (137)
T ss_dssp EESSHHHHHHHHHHHCCSEEEECSSC---------SSSCHHHHHHHHHHTTC--CCEEEECCCCC-CHHHHHHHHHHCCS
T ss_pred EECCHHHHHHHHhccCCCEEEEeCCC---------CCCCHHHHHHHHHhcCC--CCcEEEEecCc-ChHHHHHHHhCCcc
Confidence 35788999999999999998887532 221 3788899987653 68988886654 45667888898865
Q ss_pred E
Q 029526 142 K 142 (192)
Q Consensus 142 K 142 (192)
-
T Consensus 104 ~ 104 (137)
T 3hdg_A 104 L 104 (137)
T ss_dssp E
T ss_pred e
Confidence 4
No 350
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=70.24 E-value=13 Score=25.39 Aligned_cols=68 Identities=7% Similarity=-0.054 Sum_probs=45.7
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
..+++++|.+.+++..+|.+-+.+.- |.. -+++++.|++......+|+++-.+... .+. .++.+.|+.
T Consensus 32 ~~~~~~~a~~~l~~~~~dlvi~d~~l---------~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~-~~~-~~~~~~g~~ 100 (133)
T 3nhm_A 32 TAADGASGLQQALAHPPDVLISDVNM---------DGMDGYALCGHFRSEPTLKHIPVIFVSGYAP-RTE-GPADQPVPD 100 (133)
T ss_dssp EESSHHHHHHHHHHSCCSEEEECSSC---------SSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-------TTSCCCS
T ss_pred EECCHHHHHHHHhcCCCCEEEEeCCC---------CCCCHHHHHHHHHhCCccCCCCEEEEeCCCc-HhH-HHHhhcCCc
Confidence 35788999999999999988886421 222 278888998753222689998887663 333 788888864
No 351
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=70.03 E-value=42 Score=29.51 Aligned_cols=67 Identities=10% Similarity=0.001 Sum_probs=49.2
Q ss_pred CHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|++ +.|++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.
T Consensus 238 ~~~~A~~~~~~L~~~~i~~iEq---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~ga~d 302 (424)
T 3v3w_A 238 TPIEAARLGKALEPYHLFWMED---------A--VPAENQESFKLIRQHT---TTPLAV-GEVFNSIHDCRELIQNQWID 302 (424)
T ss_dssp CHHHHHHHHHHHGGGCCSEEEC---------C--SCCSSTTHHHHHHHHC---CSCEEE-CTTCCSGGGTHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEEC---------C--CChHhHHHHHHHHhhC---CCCEEE-ccCcCCHHHHHHHHHcCCCC
Confidence 6889988855 468888752 1 1334788899999888 699776 55556778899999887 66
Q ss_pred Eeecch
Q 029526 142 KFNVNT 147 (192)
Q Consensus 142 KINi~T 147 (192)
=||+..
T Consensus 303 ~v~~k~ 308 (424)
T 3v3w_A 303 YIRTTI 308 (424)
T ss_dssp EECCCT
T ss_pred eEeecc
Confidence 677763
No 352
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=69.89 E-value=50 Score=27.90 Aligned_cols=70 Identities=17% Similarity=0.160 Sum_probs=46.6
Q ss_pred HHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEee--cCCCCCHHHHHHHHhcCCeEeecc
Q 029526 69 QAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLH--GASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 69 ea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlH--GgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
.|+.|. +-|+|++-+= | .| +.+.+++|.+.+ ++|+.+- |.++.+ .+++.-++|++-|=++
T Consensus 173 Ra~ay~-eAGAd~i~~e-----~-----~~--~~~~~~~i~~~~---~~P~ii~~~g~~~~~--~~~eL~~lGv~~v~~~ 234 (287)
T 3b8i_A 173 RTLAYQ-EAGADGICLV-----G-----VR--DFAHLEAIAEHL---HIPLMLVTYGNPQLR--DDARLARLGVRVVVNG 234 (287)
T ss_dssp HHHHHH-HTTCSEEEEE-----C-----CC--SHHHHHHHHTTC---CSCEEEECTTCGGGC--CHHHHHHTTEEEEECC
T ss_pred HHHHHH-HcCCCEEEec-----C-----CC--CHHHHHHHHHhC---CCCEEEeCCCCCCCC--CHHHHHHcCCcEEEEC
Confidence 344443 6799988762 1 12 567778887776 6998864 545432 2456667799999998
Q ss_pred hHHHHHHHHH
Q 029526 147 TEVRKAYMDS 156 (192)
Q Consensus 147 T~l~~a~~~~ 156 (192)
..+..+.+.+
T Consensus 235 ~~~~raa~~a 244 (287)
T 3b8i_A 235 HAAYFAAIKA 244 (287)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 8887766544
No 353
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=69.83 E-value=3.8 Score=35.37 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=30.1
Q ss_pred CCccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 115 KGVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 115 ~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
.+||++||--.|-+.|.+++|++.|.+-|-|+-
T Consensus 71 ~~VPValHlDHg~~~e~~~~ai~~GFtSVMiDg 103 (305)
T 1rvg_A 71 ARVPVAVHLDHGSSYESVLRALRAGFTSVMIDK 103 (305)
T ss_dssp CSSCEEEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeCC
Confidence 379999999999999999999999999998753
No 354
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=69.81 E-value=39 Score=28.09 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=60.1
Q ss_pred CCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCC
Q 029526 37 KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKG 116 (192)
Q Consensus 37 ~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~ 116 (192)
.|++|=+|+=.-....+.. ....+|.+..+-.++-|.++|-| =|-.+.+.+ .++-|++|++.+ +
T Consensus 50 ~~~~~IaE~K~asPs~g~i------~~~~~p~~~A~~y~~~GA~~isv--ltd~~~f~G-----s~~~l~~ir~~v---~ 113 (272)
T 3qja_A 50 PGIGVIAEVKRASPSAGAL------ATIADPAKLAQAYQDGGARIVSV--VTEQRRFQG-----SLDDLDAVRASV---S 113 (272)
T ss_dssp SSCEEEEEEC-------------------CHHHHHHHHHHTTCSEEEE--ECCGGGHHH-----HHHHHHHHHHHC---S
T ss_pred CCCeEEEEEecCCCCCCcc------CCCCCHHHHHHHHHHcCCCEEEE--ecChhhcCC-----CHHHHHHHHHhC---C
Confidence 4677777765543221111 12357877777778999998865 344444432 366788898887 6
Q ss_pred ccEEeecCCCCCHHHHHHHHhcCCeEeecc
Q 029526 117 VLLVLHGASGLSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 117 iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~ 146 (192)
+|+..- +-.+.+.|+..|...|..=|-+.
T Consensus 114 lPvl~k-dfiid~~qv~~A~~~GAD~VlLi 142 (272)
T 3qja_A 114 IPVLRK-DFVVQPYQIHEARAHGADMLLLI 142 (272)
T ss_dssp SCEEEE-SCCCSHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEC-ccccCHHHHHHHHHcCCCEEEEe
Confidence 998865 46788889999999999999884
No 355
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=69.78 E-value=8.1 Score=32.90 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=45.4
Q ss_pred CHHHHHHHhhhhCCcEEEEe---cCcCCCCCCCCCCCCCHH-HHHHHHhhhccCCccEEeecCCCCC-HH----HHHHHH
Q 029526 66 DVNQAEEFIDETDIDALAVC---IGNVHGKYPSSGPNLKLD-LLKDLHALSSKKGVLLVLHGASGLS-AE----LIKGCI 136 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAva---iGt~HG~y~~~~p~ld~~-~L~~I~~~~~~~~iPLVlHGgSG~~-~e----~~~~~i 136 (192)
|+-.|+- +++.|+|+|.++ +++++| |+.. -.+.++ .+..++..++..++|++.=+-+|-. .+ .+++.+
T Consensus 28 D~~sA~~-~~~aG~~ai~vsg~~~a~~lG-~pD~-~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~ 104 (295)
T 1s2w_A 28 NGLSARI-VQEAGFKGIWGSGLSVSAQLG-VRDS-NEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLE 104 (295)
T ss_dssp SHHHHHH-HHHHTCSCEEECCHHHHHTC-----------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHH
T ss_pred CHHHHHH-HHHcCCCEEEeChHHHHHhCC-CCCC-CCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHH
Confidence 5555554 667899999998 777888 4432 223332 3334444444447998887666632 23 355677
Q ss_pred hcCCeEeec
Q 029526 137 ERGVRKFNV 145 (192)
Q Consensus 137 ~~Gi~KINi 145 (192)
+.|+.=||+
T Consensus 105 ~aGaagv~i 113 (295)
T 1s2w_A 105 DRGVAGACL 113 (295)
T ss_dssp HTTCCEEEE
T ss_pred HcCCcEEEE
Confidence 899999987
No 356
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=69.47 E-value=4.1 Score=35.19 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=29.5
Q ss_pred CccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 116 GVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 116 ~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
+||++||--.|-+.|.+++||+.|.+-|-|+-
T Consensus 74 ~VPValHLDHg~~~e~~~~ai~~GFtSVMiDg 105 (307)
T 3n9r_A 74 HIPVALHLDHGTTFESCEKAVKAGFTSVMIDA 105 (307)
T ss_dssp TSCEEEEEEEECSHHHHHHHHHHTCSEEEECC
T ss_pred CCcEEEECCCCCCHHHHHHHHHhCCCcEEEEC
Confidence 69999999999999999999999998888854
No 357
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=69.37 E-value=24 Score=29.81 Aligned_cols=102 Identities=22% Similarity=0.283 Sum_probs=66.4
Q ss_pred CEeEeeCCCCCHHHHHHHHHHHHHHHHhC---CCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEe
Q 029526 9 DSLMVDGSHLPFKDNISHTKYISFLAHSK---GMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVC 85 (192)
Q Consensus 9 tSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~---gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAva 85 (192)
+.+||--.|..+...| .+.++.|++. ...+|.|. .+++|+++-+ +.|+|.+.+
T Consensus 167 d~~LIkdnHi~~aggi---~~av~~ar~~~~~~~~IgVev-------------------~t~eea~eA~-~aGaD~I~l- 222 (286)
T 1x1o_A 167 DGILLKENHVRAAGGV---GEAVRRAKARAPHYLKVEVEV-------------------RSLEELEEAL-EAGADLILL- 222 (286)
T ss_dssp SCEEECHHHHHHHTSH---HHHHHHHHHHSCTTSCEEEEE-------------------SSHHHHHHHH-HHTCSEEEE-
T ss_pred cceEEECCHHHHhCCH---HHHHHHHHHhCCCCCEEEEEe-------------------CCHHHHHHHH-HcCCCEEEE-
Confidence 5677765555554444 3344445443 23444431 2367888855 679998664
Q ss_pred cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHH
Q 029526 86 IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 86 iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l 149 (192)
||. ..+.++++.+.++. .+|++-=| |+..+.++...+.|+.=|=+++.+
T Consensus 223 -d~~-----------~~~~~k~av~~v~~-~ipi~AsG--GIt~eni~~~a~tGvD~IsVgs~~ 271 (286)
T 1x1o_A 223 -DNF-----------PLEALREAVRRVGG-RVPLEASG--NMTLERAKAAAEAGVDYVSVGALT 271 (286)
T ss_dssp -ESC-----------CHHHHHHHHHHHTT-SSCEEEES--SCCHHHHHHHHHHTCSEEECTHHH
T ss_pred -CCC-----------CHHHHHHHHHHhCC-CCeEEEEc--CCCHHHHHHHHHcCCCEEEEcHHH
Confidence 342 34557777666632 58999977 688999999999999988887644
No 358
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=69.06 E-value=60 Score=28.55 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=68.4
Q ss_pred hcCCCEeEee-------CCCCCHH---HHHHHHHHHHHHHHhCCCeEEEeccccccC-CCCCc---cccccccCCCHH--
Q 029526 5 VLGFDSLMVD-------GSHLPFK---DNISHTKYISFLAHSKGMLVEAELGRLSGT-EDGLT---VEDYEAKLTDVN-- 68 (192)
Q Consensus 5 ~~GFtSVM~D-------~S~l~~e---eNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~-e~~~~---~~~~~~~~T~pe-- 68 (192)
++|+++|-+. .+..|+- .|...+.++++.|+++|+.|=-.+ |.+.. -|... ..... .++.++
T Consensus 59 ~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldf-HysD~WadPg~Q~~P~aW~-~~~~~~l~ 136 (399)
T 1ur4_A 59 EAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADF-HYSDFWADPAKQKAPKAWA-NLNFEDKK 136 (399)
T ss_dssp HTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEE-CSSSSCCSSSCCCCCGGGT-TCCHHHHH
T ss_pred HCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEe-ccCCccCCcccccCccccc-cCCHHHHH
Confidence 5799999973 2222221 457788899999999999888776 33211 01100 00011 112222
Q ss_pred --------HHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHH--------HHHHhhhccCCccEEeecCCCCCHHHH
Q 029526 69 --------QAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLL--------KDLHALSSKKGVLLVLHGASGLSAELI 132 (192)
Q Consensus 69 --------ea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L--------~~I~~~~~~~~iPLVlHGgSG~~~e~~ 132 (192)
++.+.+++-|++.-.|.|||---.-.. +.-++++| +.|++.. .++++++|-..|-..+.+
T Consensus 137 ~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~--~~~~~~~la~ll~ag~~aVR~v~--p~~~V~ih~~~~~~~~~~ 212 (399)
T 1ur4_A 137 TALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLA--GETDWAKMSQLFNAGSQAVRETD--SNILVALHFTNPETSGRY 212 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBT--TBCCHHHHHHHHHHHHHHHHHHC--TTSEEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEccccccccC--CcccHHHHHHHHHHHHHHHHHhC--CCCeEEEEeCCCcchHHH
Confidence 222333566777778999997421011 23467765 3344443 257889999888765553
No 359
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=68.85 E-value=13 Score=30.37 Aligned_cols=147 Identities=15% Similarity=0.092 Sum_probs=77.0
Q ss_pred hhhhcCCCEeEeeCCC-CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCc--cccccccCCCHHHHHHHhhhhC
Q 029526 2 EAIVLGFDSLMVDGSH-LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLT--VEDYEAKLTDVNQAEEFIDETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~-l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~--~~~~~~~~T~peea~~Fv~~Tg 78 (192)
.+-++||+.|-+-... .++.+ ...+++.+.+..+|+.+-. .........-.. ....+......+.+.++.++.|
T Consensus 44 ~~~~~G~~~vEl~~~~~~~~~~--~~~~~l~~~l~~~gl~i~~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG 120 (309)
T 2hk0_A 44 KVAKLGFDIIEVAAHHINEYSD--AELATIRKSAKDNGIILTA-GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLD 120 (309)
T ss_dssp HHHHTTCSEEEEEHHHHTTSCH--HHHHHHHHHHHHTTCEEEE-ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCEEEeccCCccccch--hhHHHHHHHHHHcCCeEEE-ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3567899999876431 11111 3456788888999999988 322210000000 0000112233456667777889
Q ss_pred CcEEEEecCcCCCCCCCCC--CCCC----HHHHHHHHhhhccCCccEEeecCC------CCCHHHHHHHHh---cCCeEe
Q 029526 79 IDALAVCIGNVHGKYPSSG--PNLK----LDLLKDLHALSSKKGVLLVLHGAS------GLSAELIKGCIE---RGVRKF 143 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~--p~ld----~~~L~~I~~~~~~~~iPLVlHGgS------G~~~e~~~~~i~---~Gi~KI 143 (192)
+..+-+..-...|.|.+.. ..-. .+.|+++.+...+.+|.|++|--. ..+.+++.+.++ .--.++
T Consensus 121 ~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~vg~ 200 (309)
T 2hk0_A 121 IHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVKDVGKNNVKV 200 (309)
T ss_dssp CCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHHTCTTEEE
T ss_pred CCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeecccccccccCCHHHHHHHHHHcCCCCeEE
Confidence 9988643211125543210 0111 334455555554458999997542 234555555543 234778
Q ss_pred ecchHHHH
Q 029526 144 NVNTEVRK 151 (192)
Q Consensus 144 Ni~T~l~~ 151 (192)
+++|.-..
T Consensus 201 ~~D~~H~~ 208 (309)
T 2hk0_A 201 MLDTFHMN 208 (309)
T ss_dssp EEEHHHHH
T ss_pred EEehhhHh
Confidence 88876443
No 360
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=68.77 E-value=8.9 Score=31.92 Aligned_cols=77 Identities=22% Similarity=0.376 Sum_probs=51.1
Q ss_pred CHHHHHHHhhhhCCcEEEEe---cCcCCCCCCCCCCCCCHHHH-HHHHhhhccCCccEEeecCCCCC---HHHHHHHHhc
Q 029526 66 DVNQAEEFIDETDIDALAVC---IGNVHGKYPSSGPNLKLDLL-KDLHALSSKKGVLLVLHGASGLS---AELIKGCIER 138 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAva---iGt~HG~y~~~~p~ld~~~L-~~I~~~~~~~~iPLVlHGgSG~~---~e~~~~~i~~ 138 (192)
|+-.|+ .+++.|+|+|.++ ++++|| |+. .-.+.++-+ ..++..++..++|++.=.-+|-. -+..++.++.
T Consensus 29 D~~sA~-~~~~aG~dai~vg~~s~a~~~G-~pD-~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~~~~~~~l~~a 105 (255)
T 2qiw_A 29 DTWSAG-LVEEAGFSGLTIGSHPVADATG-SSD-GENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSPADLIAQILEA 105 (255)
T ss_dssp SHHHHH-HHHHTTCSCEEECHHHHHHHTT-CCT-TTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCHHHHHHHHHHT
T ss_pred CHHHHH-HHHHcCCCEEEEChHHHHHhCC-CCC-CCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHHHHHHHHHHHc
Confidence 444444 4778999999997 777888 554 234555433 23333333336899986665532 6778888999
Q ss_pred CCeEeec
Q 029526 139 GVRKFNV 145 (192)
Q Consensus 139 Gi~KINi 145 (192)
|+.=||+
T Consensus 106 Ga~gv~i 112 (255)
T 2qiw_A 106 GAVGINV 112 (255)
T ss_dssp TCCEEEE
T ss_pred CCcEEEE
Confidence 9999998
No 361
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=68.75 E-value=49 Score=27.43 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=69.5
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHH---Hh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEE---FI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~---Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .+.|=+=.|. ++.+++.+ ..
T Consensus 31 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~-----------------~~t~~ai~la~~a 92 (292)
T 2ojp_A 31 HVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGTGA-----------------NATAEAISLTQRF 92 (292)
T ss_dssp HHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SSHHHHHHHHHHT
T ss_pred HHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCC-----------------ccHHHHHHHHHHH
Confidence 47889999999776 57889999999999988764 3444322211 12234443 35
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHH---HHHHhhhccCCccEEeec-----CCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLL---KDLHALSSKKGVLLVLHG-----ASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L---~~I~~~~~~~~iPLVlHG-----gSG~~~e~~~~~i~~ 138 (192)
++.|+|++-+.-= .|.. |. +-+++ ++|.+.+ ++|++|+= |..++.+.+.+..+.
T Consensus 93 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 154 (292)
T 2ojp_A 93 NDSGIVGCLTVTP----YYNR--PS-QEGLYQHFKAIAEHT---DLPQILYNVPSRTGCDLLPETVGRLAKV 154 (292)
T ss_dssp TTSSCSEEEEECC----CSSC--CC-HHHHHHHHHHHHTTC---SSCEEEECCHHHHSCCCCHHHHHHHHTS
T ss_pred HhcCCCEEEECCC----CCCC--CC-HHHHHHHHHHHHHhc---CCCEEEEeCcchhccCCCHHHHHHHHcC
Confidence 6789998876521 2321 21 12333 4455544 79999973 677899999888654
No 362
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=68.73 E-value=24 Score=29.63 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhCCCeEE---EeccccccCCCCCccccc-cccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCC
Q 029526 21 KDNISHTKYISFLAHSKGMLVE---AELGRLSGTEDGLTVEDY-EAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSS 96 (192)
Q Consensus 21 eeNi~~Tk~vv~~Ah~~gv~VE---aElG~i~g~e~~~~~~~~-~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~ 96 (192)
..|+....++.+++.+.|+..- +++-.+...+.- .... .....+.++.++++++.|+.. ++|..|.-+
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~--~w~~~~~~~~~~~~~~~~~~~~gi~i------~~H~py~iN 128 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLF--PYDWEGAYEEELARLGALARAFGQRL------SMHPGQYVN 128 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTC--CSCHHHHHHHHHHHHHHHHHHTTCEE------EECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcc--cCCcCCCCHHHHHHHHHHHHHcCCeE------EEeCchhhc
Confidence 7899999999999999885432 222222211110 0000 001123456677788889863 349888532
Q ss_pred CCCCCHHHH----HHHH---hhhccCCcc---EEeecCCCCC
Q 029526 97 GPNLKLDLL----KDLH---ALSSKKGVL---LVLHGASGLS 128 (192)
Q Consensus 97 ~p~ld~~~L----~~I~---~~~~~~~iP---LVlHGgSG~~ 128 (192)
-...|.+.. +.+. ++....++| +|+|.|+-..
T Consensus 129 L~S~~~e~re~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~~ 170 (301)
T 2j6v_A 129 PGSPDPEVVERSLAELRYSARLLSLLGAEDGVLVLHLGGAYG 170 (301)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEECCCcCCC
Confidence 122343332 2222 222233554 9999997544
No 363
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=68.59 E-value=16 Score=30.00 Aligned_cols=148 Identities=14% Similarity=0.115 Sum_probs=78.3
Q ss_pred hhhcCCCEeEeeCCC----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccC--CCCC--ccccccccCCCHHHHHHHh
Q 029526 3 AIVLGFDSLMVDGSH----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGT--EDGL--TVEDYEAKLTDVNQAEEFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~--e~~~--~~~~~~~~~T~peea~~Fv 74 (192)
|-++||+.|=+-... .|-+..-...+++.+.+.++|+.+-+=.....+. .+-. .....+..+....++.++.
T Consensus 44 a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 123 (316)
T 3qxb_A 44 RDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLKRAIDMT 123 (316)
T ss_dssp HHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999875433 2323323366888899999999987521110010 0000 0000011122335667777
Q ss_pred hhhCCcEEEEecCc-CCCCCCCCCC-----CCCHHHHHHHHhhhccCCcc-EEee----cC-CCCCHHHHHHHHh-----
Q 029526 75 DETDIDALAVCIGN-VHGKYPSSGP-----NLKLDLLKDLHALSSKKGVL-LVLH----GA-SGLSAELIKGCIE----- 137 (192)
Q Consensus 75 ~~TgvD~LAvaiGt-~HG~y~~~~p-----~ld~~~L~~I~~~~~~~~iP-LVlH----Gg-SG~~~e~~~~~i~----- 137 (192)
.+-|+..+.+.+|. .+|.|....+ +.=.+.|+++.+...+.+|. |+++ +. -+.+.+++.+.++
T Consensus 124 ~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~~~~~~l~~~v~~~ 203 (316)
T 3qxb_A 124 AAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSAADAARLMADLDGR 203 (316)
T ss_dssp HHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSHHHHHHHHHHHTTT
T ss_pred HHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCHHHHHHHHHHHhcc
Confidence 78899999776766 3344432100 01123445555554445798 9985 32 2344555555443
Q ss_pred -cCCeEeecchHHH
Q 029526 138 -RGVRKFNVNTEVR 150 (192)
Q Consensus 138 -~Gi~KINi~T~l~ 150 (192)
.--.+++++|.-.
T Consensus 204 ~~~~vg~~lD~~H~ 217 (316)
T 3qxb_A 204 TEIPVRLLVDWGHA 217 (316)
T ss_dssp SSSCEEEEEEHHHH
T ss_pred CCCCEEEEEEccch
Confidence 2346788877543
No 364
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=68.58 E-value=32 Score=29.67 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 98 PNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 98 p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
|.++++.+++|++.+ ++|+++-|. .+.++.+++.+.|+.=|-++.
T Consensus 210 ~~~~~~~i~~l~~~~---~~pv~vK~~--~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 210 RSLSWKDVAWLQTIT---SLPILVKGV--ITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp TTCCHHHHHHHHHHC---CSCEEEECC--CSHHHHHHHHHTTCSEEEECC
T ss_pred ccchHHHHHHHHHHh---CCCEEEEec--CCHHHHHHHHHcCCCEEEECC
Confidence 456778888888887 699998665 567889999999998888743
No 365
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=68.58 E-value=51 Score=27.51 Aligned_cols=108 Identities=18% Similarity=0.222 Sum_probs=69.9
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .+.|=+=.|. ++.+++. ++.
T Consensus 30 li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~-----------------~~t~~ai~la~~A 91 (297)
T 2rfg_A 30 QIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGAGS-----------------NNPVEAVRYAQHA 91 (297)
T ss_dssp HHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEccCC-----------------CCHHHHHHHHHHH
Confidence 47789999998876 68899999999999988763 2443222111 1223443 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHH---HHHHHhhhccCCccEEeec-----CCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDL---LKDLHALSSKKGVLLVLHG-----ASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~---L~~I~~~~~~~~iPLVlHG-----gSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|.. |. +-++ .++|.+.+ ++|++|.= |..++.+.+.+..+.
T Consensus 92 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 153 (297)
T 2rfg_A 92 QQAGADAVLCVAG----YYNR--PS-QEGLYQHFKMVHDAI---DIPIIVYNIPPRAVVDIKPETMARLAAL 153 (297)
T ss_dssp HHHTCSEEEECCC----TTTC--CC-HHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred HhcCCCEEEEcCC----CCCC--CC-HHHHHHHHHHHHHhc---CCCEEEEeCccccCCCCCHHHHHHHHcC
Confidence 6789998877521 2321 21 1222 34566555 79999974 677899999988654
No 366
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=68.51 E-value=33 Score=28.50 Aligned_cols=107 Identities=18% Similarity=0.187 Sum_probs=69.8
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .++|=+=.|. ++.+++. ++.
T Consensus 30 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~-----------------~~t~~ai~la~~A 91 (292)
T 2vc6_A 30 QIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGAGS-----------------NSTAEAIAFVRHA 91 (292)
T ss_dssp HHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCC-----------------ccHHHHHHHHHHH
Confidence 47789999988776 68899999999999988763 2443222111 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHH---HHHHhhhccCCccEEee-----cCCCCCHHHHHHHHh
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLL---KDLHALSSKKGVLLVLH-----GASGLSAELIKGCIE 137 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L---~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~ 137 (192)
++.|+|++-+.-= .|.. |. +-+++ ++|.+.+ ++|++|+ -|..++.+.+.+..+
T Consensus 92 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 92 QNAGADGVLIVSP----YYNK--PT-QEGIYQHFKAIDAAS---TIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHTTCSEEEEECC----CSSC--CC-HHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHcCCCEEEEcCC----CCCC--CC-HHHHHHHHHHHHHhC---CCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 6789998876531 2321 21 12333 3566665 7999996 477899999998876
No 367
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=68.36 E-value=34 Score=29.81 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=50.2
Q ss_pred CCHHHHHHHhhh---hCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-C
Q 029526 65 TDVNQAEEFIDE---TDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-V 140 (192)
Q Consensus 65 T~peea~~Fv~~---TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i 140 (192)
-++++|.+|+++ .++.++= .+ -|.-|++-+++|++.+ ++|++. |-|=....+|+++++.| +
T Consensus 232 ~~~~~A~~~~~~l~~~~i~~iE----------eP-~~~~d~~~~~~l~~~~---~ipIa~-dE~~~~~~~~~~~i~~~a~ 296 (421)
T 4hnl_A 232 LHPNQAIQFAKAAEPYQLFFLE----------DI-LPPDQSHWLTQLRSQS---ATPIAT-GELFNNPMEWQELVKNRQI 296 (421)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEE----------CC-SCGGGGGGHHHHHTTC---CCCEEE-CTTCCSGGGTHHHHHTTCC
T ss_pred CCHHHHHHHHHHhhhhhhcccc----------cC-CcccchHHHHHHHhcC---CCCeec-CcceehhHHHHHHHhcCCc
Confidence 478899998654 5666653 11 2456888899999887 699987 77777888899999887 5
Q ss_pred eEeecch
Q 029526 141 RKFNVNT 147 (192)
Q Consensus 141 ~KINi~T 147 (192)
.=||+..
T Consensus 297 d~v~~d~ 303 (421)
T 4hnl_A 297 DFMRAHV 303 (421)
T ss_dssp SEECCCG
T ss_pred eEEEeCC
Confidence 5667653
No 368
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=68.19 E-value=8.3 Score=32.11 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=44.5
Q ss_pred HHHHHHhhhhCCc-EEEEecCcCCCCCCCCCCCC--CHH----HHHHHHhhhccCCccEEeecCCCCCHHHH----HHHH
Q 029526 68 NQAEEFIDETDID-ALAVCIGNVHGKYPSSGPNL--KLD----LLKDLHALSSKKGVLLVLHGASGLSAELI----KGCI 136 (192)
Q Consensus 68 eea~~Fv~~TgvD-~LAvaiGt~HG~y~~~~p~l--d~~----~L~~I~~~~~~~~iPLVlHGgSG~~~e~~----~~~i 136 (192)
.++.+.+++.|+| .+-+.++.-+- +. ...+ +++ .++++++.+ ++|+.+=-..+++.+++ +.+.
T Consensus 109 ~~~a~~~~~~g~d~~iein~~~P~~--~g-~~~~g~~~e~~~~iv~~vr~~~---~~Pv~vKi~~~~~~~~~~~~a~~~~ 182 (311)
T 1jub_A 109 IAMLKKIQESDFSGITELNLSCPNV--PG-EPQLAYDFEATEKLLKEVFTFF---TKPLGVKLPPYFDLVHFDIMAEILN 182 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEESCCCCS--SS-CCCGGGCHHHHHHHHHHHTTTC---CSCEEEEECCCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCeEEEEeccCCCC--CC-cccccCCHHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHHHHH
Confidence 3455556678999 99999973331 11 1222 444 444444444 68998877777777665 5667
Q ss_pred hcCCeEeec
Q 029526 137 ERGVRKFNV 145 (192)
Q Consensus 137 ~~Gi~KINi 145 (192)
+.|+.=|.+
T Consensus 183 ~~G~d~i~v 191 (311)
T 1jub_A 183 QFPLTYVNS 191 (311)
T ss_dssp TSCCCEEEE
T ss_pred HcCCcEEEe
Confidence 778776543
No 369
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=68.00 E-value=9.1 Score=29.71 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=52.5
Q ss_pred cCCCHHHHHHHhhhh--CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHH-HHHHHhcC
Q 029526 63 KLTDVNQAEEFIDET--DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAEL-IKGCIERG 139 (192)
Q Consensus 63 ~~T~peea~~Fv~~T--gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~-~~~~i~~G 139 (192)
.+.+++++.+.+++. ++|.+=+.+=++ +. .-++.+++|++... ++|+..|=-.--+.+. ++++++.|
T Consensus 8 D~~~~~~~~~~~~~~~~~~diie~G~p~~---~~-----~g~~~i~~ir~~~~--~~~i~~~~~~~~~~~~~~~~~~~~G 77 (211)
T 3f4w_A 8 DELTLPEAMVFMDKVVDDVDIIEVGTPFL---IR-----EGVNAIKAIKEKYP--HKEVLADAKIMDGGHFESQLLFDAG 77 (211)
T ss_dssp CSCCHHHHHHHHHHHGGGCSEEEECHHHH---HH-----HTTHHHHHHHHHCT--TSEEEEEEEECSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHhhcCccEEEeCcHHH---Hh-----ccHHHHHHHHHhCC--CCEEEEEEEeccchHHHHHHHHhcC
Confidence 468899999988875 788766542110 11 12567888988732 5888777655555565 89999999
Q ss_pred CeEeecchH
Q 029526 140 VRKFNVNTE 148 (192)
Q Consensus 140 i~KINi~T~ 148 (192)
+.-|.+...
T Consensus 78 ad~v~v~~~ 86 (211)
T 3f4w_A 78 ADYVTVLGV 86 (211)
T ss_dssp CSEEEEETT
T ss_pred CCEEEEeCC
Confidence 999988764
No 370
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=67.89 E-value=17 Score=24.25 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=47.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++++++.+.++....|.+-+.+.--. .. -+++++.|++......+|+++- ++ ...+...++.+.|+.-
T Consensus 35 ~~~~~~a~~~~~~~~~dlvi~d~~~~~--------~~~g~~~~~~l~~~~~~~~~~ii~~-~~-~~~~~~~~~~~~g~~~ 104 (127)
T 2gkg_A 35 TTDGKGSVEQIRRDRPDLVVLAVDLSA--------GQNGYLICGKLKKDDDLKNVPIVII-GN-PDGFAQHRKLKAHADE 104 (127)
T ss_dssp ECCHHHHHHHHHHHCCSEEEEESBCGG--------GCBHHHHHHHHHHSTTTTTSCEEEE-EC-GGGHHHHHHSTTCCSE
T ss_pred ecCHHHHHHHHHhcCCCEEEEeCCCCC--------CCCHHHHHHHHhcCccccCCCEEEE-ec-CCchhHHHHHHhCcch
Confidence 477899999999999999887653210 11 2678899988621226898877 44 3456677888888754
No 371
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=67.87 E-value=43 Score=29.33 Aligned_cols=67 Identities=10% Similarity=-0.009 Sum_probs=49.2
Q ss_pred CHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|++ +-|++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.
T Consensus 232 ~~~~A~~~~~~L~~~~i~~iEq---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~l~~~a~d 296 (418)
T 3r4e_A 232 TPQEAANLGKMLEPYQLFWLED---------C--TPAENQEAFRLVRQHT---VTPLAV-GEIFNTIWDAKDLIQNQLID 296 (418)
T ss_dssp CHHHHHHHHHHHGGGCCSEEES---------C--SCCSSGGGGHHHHHHC---CSCEEE-CTTCCSGGGTHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhhCCCEEEC---------C--CCccCHHHHHHHHhcC---CCCEEE-cCCcCCHHHHHHHHHcCCCC
Confidence 5889988855 468888851 1 1334788899999988 699776 55556778899999887 66
Q ss_pred Eeecch
Q 029526 142 KFNVNT 147 (192)
Q Consensus 142 KINi~T 147 (192)
=||+..
T Consensus 297 ~v~~k~ 302 (418)
T 3r4e_A 297 YIRATV 302 (418)
T ss_dssp EECCCT
T ss_pred eEecCc
Confidence 777763
No 372
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=67.85 E-value=27 Score=24.08 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=50.0
Q ss_pred cCCCHHHHHHHhhh------hCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 63 KLTDVNQAEEFIDE------TDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 63 ~~T~peea~~Fv~~------TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
..+++++|.++++. ...|.+-+.+.- |.. -+++++.|++......+|+++=.++. ..+...++
T Consensus 38 ~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~-~~~~~~~~ 107 (143)
T 2qvg_A 38 IAKSGNQALDMLYGRNKENKIHPKLILLDINI---------PKMNGIEFLKELRDDSSFTDIEVFVLTAAY-TSKDKLAF 107 (143)
T ss_dssp EESSHHHHHHHHHTCTTCCCCCCSEEEEETTC---------TTSCHHHHHHHHTTSGGGTTCEEEEEESCC-CHHHHHHH
T ss_pred EECCHHHHHHHHHhcccccCCCCCEEEEecCC---------CCCCHHHHHHHHHcCccccCCcEEEEeCCC-CHHHHHHH
Confidence 35788999999987 678988887522 222 36888888876411368988887665 46678889
Q ss_pred HhcCCeE
Q 029526 136 IERGVRK 142 (192)
Q Consensus 136 i~~Gi~K 142 (192)
.+.|+.-
T Consensus 108 ~~~g~~~ 114 (143)
T 2qvg_A 108 ESLNIRG 114 (143)
T ss_dssp TTTTCCE
T ss_pred HhcCCCe
Confidence 9999754
No 373
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=67.66 E-value=4.8 Score=34.99 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHh---hhhCCc-EEEEecCcCCCCCCCCCCCCCH
Q 029526 27 TKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFI---DETDID-ALAVCIGNVHGKYPSSGPNLKL 102 (192)
Q Consensus 27 Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv---~~TgvD-~LAvaiGt~HG~y~~~~p~ld~ 102 (192)
++++.+.|++.|..| |.+ ..++.|.++..+ ++++.. .|.+|-|+. .|.+ ..+-.
T Consensus 6 ~~~ll~~A~~~~yAV----~Af--------------Nv~n~e~~~Ail~AAee~~sPvIlq~s~g~~--~y~g--~~~~~ 63 (323)
T 2isw_A 6 LRQMLGEARKHKYGV----GAF--------------NVNNMEQIQGIMKAVVQLKSPVILQCSRGAL--KYSD--MIYLK 63 (323)
T ss_dssp HHHHHHHHHHTTCCE----EEE--------------ECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH--HHTT--THHHH
T ss_pred HHHHHHHHHHCCceE----EEE--------------eeCCHHHHHHHHHHHHHhCCCEEEECChhHH--HhCC--HHHHH
Confidence 577888888776655 222 123444544443 344443 466666643 4543 21112
Q ss_pred HHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecch
Q 029526 103 DLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 103 ~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T 147 (192)
..++...+.. .+||++||--.|-+.+.+++|++.|.+-|-|+-
T Consensus 64 ~~v~~aa~~~--~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDg 106 (323)
T 2isw_A 64 KLCEAALEKH--PDIPICIHLDHGDTLESVKMAIDLGFSSVMIDA 106 (323)
T ss_dssp HHHHHHHHHC--TTSCEEEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhc--CCCcEEEECCCCCCHHHHHHHHHcCCCeEEecC
Confidence 2333333320 369999999999999999999999998888753
No 374
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=67.52 E-value=52 Score=27.49 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=70.1
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHH---Hh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEE---FI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~---Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|-.+..+.+++.+.. .+.|=+=.|. ++.+++.+ .+
T Consensus 42 li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg~-----------------~~t~~ai~la~~A 103 (301)
T 1xky_A 42 LIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGTGS-----------------NNTHASIDLTKKA 103 (301)
T ss_dssp HHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SCHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCCCC-----------------CCHHHHHHHHHHH
Confidence 47889999999887 57889999999999988763 3444322221 12234433 35
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHH---HHHHhhhccCCccEEeec-----CCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLL---KDLHALSSKKGVLLVLHG-----ASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L---~~I~~~~~~~~iPLVlHG-----gSG~~~e~~~~~i~~ 138 (192)
++.|+|++-+.-= .|.. |. +-+++ ++|.+.+ ++|++|.= |..++.+.+.+..+.
T Consensus 104 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 165 (301)
T 1xky_A 104 TEVGVDAVMLVAP----YYNK--PS-QEGMYQHFKAIAEST---PLPVMLYNVPGRSIVQISVDTVVRLSEI 165 (301)
T ss_dssp HHTTCSEEEEECC----CSSC--CC-HHHHHHHHHHHHHTC---SSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred HhcCCCEEEEcCC----CCCC--CC-HHHHHHHHHHHHHhc---CCCEEEEeCccccCCCCCHHHHHHHHcC
Confidence 6789998877531 2321 21 12233 4555555 79999973 677899999988754
No 375
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=67.46 E-value=43 Score=26.26 Aligned_cols=123 Identities=17% Similarity=0.144 Sum_probs=76.2
Q ss_pred hhhhcCCCEeEeeCCCC----------CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH
Q 029526 2 EAIVLGFDSLMVDGSHL----------PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE 71 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l----------~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~ 71 (192)
++-++||+.|-+-.... ++.-.-...+++.+.+..+|+.+-+=- ... . ......+.+.
T Consensus 30 ~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~--~~~-~---------~~~~~~~~~i 97 (262)
T 3p6l_A 30 KTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTG--VYV-A---------EKSSDWEKMF 97 (262)
T ss_dssp HHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEE--EEC-C---------SSTTHHHHHH
T ss_pred HHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEe--ccC-C---------ccHHHHHHHH
Confidence 45678999999875431 222223346778888889998875321 111 1 0123457888
Q ss_pred HHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC----CHHHHHHHHhcC--CeEeec
Q 029526 72 EFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL----SAELIKGCIERG--VRKFNV 145 (192)
Q Consensus 72 ~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~----~~e~~~~~i~~G--i~KINi 145 (192)
++.++-|++.+-+.-| + =.|+.|.++.+.. +|.|++|--.+. +.+++.+.++.+ -.++++
T Consensus 98 ~~A~~lGa~~v~~~~~----------~-~~~~~l~~~a~~~---gv~l~~En~~~~~~~~~~~~~~~ll~~~~~~~g~~~ 163 (262)
T 3p6l_A 98 KFAKAMDLEFITCEPA----------L-SDWDLVEKLSKQY---NIKISVHNHPQPSDYWKPENLLKAISGRSQSLGSCS 163 (262)
T ss_dssp HHHHHTTCSEEEECCC----------G-GGHHHHHHHHHHH---TCEEEEECCSSSSSSSSHHHHHHHHTTSCTTEEEEE
T ss_pred HHHHHcCCCEEEecCC----------H-HHHHHHHHHHHHh---CCEEEEEeCCCccccCCHHHHHHHHHhCCCceEEEe
Confidence 8899999999987422 1 1344555554443 799999865442 567788877633 356777
Q ss_pred chHHH
Q 029526 146 NTEVR 150 (192)
Q Consensus 146 ~T~l~ 150 (192)
+|.-.
T Consensus 164 D~~h~ 168 (262)
T 3p6l_A 164 DVGHW 168 (262)
T ss_dssp EHHHH
T ss_pred chHHH
Confidence 77554
No 376
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=67.46 E-value=27 Score=23.93 Aligned_cols=70 Identities=4% Similarity=0.130 Sum_probs=50.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.++....|.+-+.+.- |.. -+++++.|++......+|+++-.+.. +.+...++.+.|+.-
T Consensus 40 ~~~~~~a~~~l~~~~~dlii~d~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~ 109 (143)
T 3cnb_A 40 AYNPFDAGDLLHTVKPDVVMLDLMM---------VGMDGFSICHRIKSTPATANIIVIAMTGAL-TDDNVSRIVALGAET 109 (143)
T ss_dssp ECSHHHHHHHHHHTCCSEEEEETTC---------TTSCHHHHHHHHHTSTTTTTSEEEEEESSC-CHHHHHHHHHTTCSE
T ss_pred ECCHHHHHHHHHhcCCCEEEEeccc---------CCCcHHHHHHHHHhCccccCCcEEEEeCCC-CHHHHHHHHhcCCcE
Confidence 5778999999999999998887522 222 26888999873212368988887665 456678888999754
Q ss_pred e
Q 029526 143 F 143 (192)
Q Consensus 143 I 143 (192)
+
T Consensus 110 ~ 110 (143)
T 3cnb_A 110 C 110 (143)
T ss_dssp E
T ss_pred E
Confidence 3
No 377
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=67.41 E-value=10 Score=31.16 Aligned_cols=63 Identities=11% Similarity=0.188 Sum_probs=45.7
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEeec
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFNV 145 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KINi 145 (192)
..++.+|+++.|+|++.++..|+|-. .+.++++.+ ++|++ |+.+.-++.+.+ .+..||=+
T Consensus 54 ~~~~~~~L~~~g~d~iviaCNTas~~-----------~l~~lr~~~---~iPvi-----gi~ep~~~~A~~~~~~~rIgV 114 (267)
T 2gzm_A 54 TWEMTEHLLDLNIKMLVIACNTATAV-----------VLEEMQKQL---PIPVV-----GVIHPGSRTALKVTNTYHVGI 114 (267)
T ss_dssp HHHHHHHHHTTTCSEEEECCHHHHHH-----------HHHHHHHHC---SSCEE-----ESHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCchhhHH-----------HHHHHHHhC---CCCEE-----eecHHHHHHHHHccCCCEEEE
Confidence 34566777888999999999999831 156787777 69965 445666777765 46778888
Q ss_pred -chH
Q 029526 146 -NTE 148 (192)
Q Consensus 146 -~T~ 148 (192)
+|.
T Consensus 115 laT~ 118 (267)
T 2gzm_A 115 IGTI 118 (267)
T ss_dssp EECH
T ss_pred EECh
Confidence 664
No 378
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=67.38 E-value=52 Score=27.38 Aligned_cols=109 Identities=14% Similarity=0.178 Sum_probs=71.5
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.++.|.+.+.+=||. |+.+|-.+..+.+++.+.. .+.|=+=.|. ++.+++. +++
T Consensus 37 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~-----------------~~t~~ai~la~~a 98 (297)
T 3flu_A 37 HIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK-RVPVIAGTGA-----------------NNTVEAIALSQAA 98 (297)
T ss_dssp HHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEeCCC-----------------cCHHHHHHHHHHH
Confidence 467899999988875 5789999999999988864 3555432211 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCC--CHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNL--KLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~l--d~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|-. |.- =++-.++|.+.+ ++|++|+ -|..++.+.+.+..+.
T Consensus 99 ~~~Gadavlv~~P----~y~~--~~~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 160 (297)
T 3flu_A 99 EKAGADYTLSVVP----YYNK--PSQEGIYQHFKTIAEAT---SIPMIIYNVPGRTVVSMTNDTILRLAEI 160 (297)
T ss_dssp HHTTCSEEEEECC----CSSC--CCHHHHHHHHHHHHHHC---CSCEEEEECHHHHSSCCCHHHHHHHTTS
T ss_pred HHcCCCEEEECCC----CCCC--CCHHHHHHHHHHHHHhC---CCCEEEEECCchhccCCCHHHHHHHHcC
Confidence 7789998877521 1321 221 133345666666 7999998 4788999999988754
No 379
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=67.34 E-value=24 Score=31.46 Aligned_cols=80 Identities=15% Similarity=0.192 Sum_probs=53.3
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCC----CC-CCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCC
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKY----PS-SGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGV 140 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y----~~-~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi 140 (192)
+++.|+..+ |+|.+-|.+|----.+ .+ +.|. +.-|.++.+..+..++|++.-||-..+.+ +.+|+.+|.
T Consensus 278 ~~~~a~~l~---G~d~v~vg~g~g~~~~~r~~~~~g~~~--~~~l~~~~~~~~~~~vpVia~GGi~~~~d-i~kalalGA 351 (486)
T 2cu0_A 278 NPKAVDDLT---FADAVKVGIGPGSICTTRIVAGVGVPQ--ITAVAMVADRAQEYGLYVIADGGIRYSGD-IVKAIAAGA 351 (486)
T ss_dssp CHHHHTTCT---TSSEEEECSSCSTTBCHHHHTCCCCCH--HHHHHHHHHHHHHHTCEEEEESCCCSHHH-HHHHHHTTC
T ss_pred CHHHHHHhh---CCCeEEEeeeeccceeeeEEeecCcch--HHHHHHHHHHHHHcCCcEEecCCCCCHHH-HHHHHHcCC
Confidence 677777666 9999998554311000 00 1132 34455555544333799999998876655 778999999
Q ss_pred eEeecchHHHH
Q 029526 141 RKFNVNTEVRK 151 (192)
Q Consensus 141 ~KINi~T~l~~ 151 (192)
.=+-++|.+..
T Consensus 352 ~~v~~g~~~~~ 362 (486)
T 2cu0_A 352 DAVMLGNLLAG 362 (486)
T ss_dssp SEEEESTTTTT
T ss_pred CceeeChhhhc
Confidence 99999999863
No 380
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=67.26 E-value=12 Score=33.68 Aligned_cols=67 Identities=12% Similarity=0.260 Sum_probs=47.3
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
.+.++. +.+.|+|.+.+ .+.||. |...++.+++|++.+. ++|++..+- .+.++.+++.+.|+.-|.+
T Consensus 257 ~~~a~~-~~~aG~d~v~i--~~~~G~-----~~~~~~~i~~i~~~~~--~~pvi~~~v--~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDL-LTQAGVDVIVL--DSSQGN-----SVYQIAMVHYIKQKYP--HLQVIGGNV--VTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHH-HHHTTCSEEEE--CCSCCC-----SHHHHHHHHHHHHHCT--TCEEEEEEE--CSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHH-HHHcCCCEEEe--eccCCc-----chhHHHHHHHHHHhCC--CCceEeccc--chHHHHHHHHHcCCCEEEE
Confidence 344555 44589996665 455752 4445688899988873 588876332 6788899999999998866
No 381
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=67.22 E-value=30 Score=26.95 Aligned_cols=66 Identities=21% Similarity=0.148 Sum_probs=49.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.+++++|.+.++...+|.+-+-+. .|..| +++++.|++... .+|+++-.+.. ..+...++.+.|+.
T Consensus 53 ~~~~~~al~~~~~~~~dlvllD~~---------lp~~~g~~~~~~lr~~~~--~~~ii~lt~~~-~~~~~~~~~~~Ga~ 119 (250)
T 3r0j_A 53 ATNGAQALDRARETRPDAVILDVX---------MPGMDGFGVLRRLRADGI--DAPALFLTARD-SLQDKIAGLTLGGD 119 (250)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEESC---------CSSSCHHHHHHHHHHTTC--CCCEEEEECST-THHHHHHHHTSTTC
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCC---------CCCCCHHHHHHHHHhcCC--CCCEEEEECCC-CHHHHHHHHHcCCc
Confidence 467899999999999999888753 13333 788999987643 68988887665 34567788888864
No 382
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=67.20 E-value=6.5 Score=33.59 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=45.5
Q ss_pred hcCCCEeEeeCCCC----CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 5 VLGFDSLMVDGSHL----PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 5 ~~GFtSVM~D~S~l----~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
+..|+-|=||.|-. .-..+-...+.++.+||..|+.|=|| |.|. ++-.+++.+-|||
T Consensus 245 ~lp~d~iKID~sfv~~~~~~~~~~~iv~~ii~la~~lg~~vvAE-----GVEt--------------~~q~~~L~~lG~d 305 (340)
T 4hjf_A 245 RLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAE-----GVEN--------------AEMAHALQSLGCD 305 (340)
T ss_dssp GSCCSEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHTCEEEEE-----CCCS--------------HHHHHHHHHTTCC
T ss_pred hCCCChhcccHHhhhcccCCHhHHHHHHHHHHHHHHcCCEEEEE-----eCCc--------------HHHHHHHHHcCCC
Confidence 45677788888754 23566778899999999999999999 6553 3556778899999
Q ss_pred EE
Q 029526 81 AL 82 (192)
Q Consensus 81 ~L 82 (192)
.+
T Consensus 306 ~~ 307 (340)
T 4hjf_A 306 YG 307 (340)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 383
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=67.11 E-value=25 Score=23.78 Aligned_cols=65 Identities=20% Similarity=0.199 Sum_probs=46.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.+++++|.+.+++...|.+-+-+.- |.. -++.++.|++.. ++|+++--+.. +.+...++.+.|+.
T Consensus 32 ~~~~~~al~~~~~~~~dlii~D~~~---------p~~~g~~~~~~lr~~~---~~~ii~~t~~~-~~~~~~~~~~~ga~ 97 (120)
T 3f6p_A 32 AHDGNEAVEMVEELQPDLILLDIML---------PNKDGVEVCREVRKKY---DMPIIMLTAKD-SEIDKVIGLEIGAD 97 (120)
T ss_dssp ESSHHHHHHHHHTTCCSEEEEETTS---------TTTHHHHHHHHHHTTC---CSCEEEEEESS-CHHHHHHHHHTTCC
T ss_pred eCCHHHHHHHHhhCCCCEEEEeCCC---------CCCCHHHHHHHHHhcC---CCCEEEEECCC-ChHHHHHHHhCCcc
Confidence 4677899999999999998887531 222 267788888654 68988776544 44556778888864
No 384
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=66.99 E-value=27 Score=23.72 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=49.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.+++++|.+.+++...|.+-+.+.-- . .=-++.++.|++... .+|+++-.+.. ..+...++.+.|+.-+
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l~-----~---~~g~~~~~~l~~~~~--~~~ii~~t~~~-~~~~~~~~~~~g~~~~ 105 (130)
T 3eod_A 37 AADGVDALELLGGFTPDLMICDIAMP-----R---MNGLKLLEHIRNRGD--QTPVLVISATE-NMADIAKALRLGVEDV 105 (130)
T ss_dssp ESCHHHHHHHHTTCCCSEEEECCC-------------CHHHHHHHHHTTC--CCCEEEEECCC-CHHHHHHHHHHCCSEE
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCCC-----C---CCHHHHHHHHHhcCC--CCCEEEEEcCC-CHHHHHHHHHcCCCEE
Confidence 46789999999999999988875321 1 113788899988653 68988886655 5566788889997643
No 385
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=66.95 E-value=8.7 Score=31.21 Aligned_cols=71 Identities=8% Similarity=0.086 Sum_probs=51.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEe
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKF 143 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KI 143 (192)
.+|+|+.+ ..+-|+|.+.+ |+. .+..-++.|++|+..+. ++|+|-=| |+..+++...++ .|+.=+
T Consensus 127 ~t~~e~~~-A~~~Gad~vk~--------FPa-~~~~G~~~lk~i~~~~~--~ipvvaiG--GI~~~N~~~~l~~~Ga~~v 192 (225)
T 1mxs_A 127 STPSEIMM-GYALGYRRFKL--------FPA-EISGGVAAIKAFGGPFG--DIRFCPTG--GVNPANVRNYMALPNVMCV 192 (225)
T ss_dssp CSHHHHHH-HHTTTCCEEEE--------TTH-HHHTHHHHHHHHHTTTT--TCEEEEBS--SCCTTTHHHHHHSTTBCCE
T ss_pred CCHHHHHH-HHHCCCCEEEE--------ccC-ccccCHHHHHHHHhhCC--CCeEEEEC--CCCHHHHHHHHhccCCEEE
Confidence 46788766 44678898887 432 12124677888888764 59999888 667788999999 688777
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
= ++.+.
T Consensus 193 ~-gSai~ 198 (225)
T 1mxs_A 193 G-TTWML 198 (225)
T ss_dssp E-ECTTS
T ss_pred E-Echhc
Confidence 7 77764
No 386
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=66.77 E-value=40 Score=30.05 Aligned_cols=109 Identities=9% Similarity=0.128 Sum_probs=72.8
Q ss_pred hcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEE
Q 029526 5 VLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAV 84 (192)
Q Consensus 5 ~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAv 84 (192)
+.||+.+=+-....+.++.++..+.+.+..- ++. |. .+. ...| ++++|.+|.++.. +.|.
T Consensus 216 ~~Gf~~~KlKvG~~~~~~di~~v~avrea~p--d~~-------L~-------vDa-N~~w-t~~~Ai~~~~~le-~~l~- 275 (464)
T 4g8t_A 216 KYGFNDFKLKGGVLDGFEEAEAVTALAKRFP--DAR-------IT-------LDP-NGAW-SLDEAVKIGKQLK-GVLA- 275 (464)
T ss_dssp HHCCSCEEEECSSSCHHHHHHHHHHHHHHST--TCC-------EE-------EEC-TTCB-CHHHHHHHHHHTT-TTCS-
T ss_pred HcCCCeEEEeCCCCCHHHHHHHHHHHHhhCC--Cce-------EE-------EEC-CCcc-CHHHHHHHHHHhh-hccc-
Confidence 3499999999988999999988777665431 111 10 000 1123 6899999998763 1111
Q ss_pred ecCcCCCCCCCC-CCCCC----HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 85 CIGNVHGKYPSS-GPNLK----LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 85 aiGt~HG~y~~~-~p~ld----~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
|-.. -|.-| .+.++++++.+ ++|+.. |-+=.+..+++++++.|..-|+.
T Consensus 276 --------wiEeP~~~~d~~~~~e~~a~lr~~~---~iPIa~-gE~~~~~~~~~~~i~~~avdi~~ 329 (464)
T 4g8t_A 276 --------YAEDPCGAEQGYSGREIMAEFRRAT---GLPTAT-NMIATDWRQMGHTISLQSVDIPL 329 (464)
T ss_dssp --------CEESCBCCBTTBCHHHHHHHHHHHH---CCCEEE-SSSSCSHHHHHHHHHHTCCSEEB
T ss_pred --------eeecCcCcccccchHHHHHhhhccC---CCCccc-cccccchhhHHHHHHhhCCCEEe
Confidence 2211 11122 47788999888 699987 77888899999999999766654
No 387
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=66.77 E-value=58 Score=27.50 Aligned_cols=131 Identities=8% Similarity=0.001 Sum_probs=77.1
Q ss_pred hhhhcCCCEeEeeCCC---------------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCC-ccccccccCC
Q 029526 2 EAIVLGFDSLMVDGSH---------------LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGL-TVEDYEAKLT 65 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~---------------l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~-~~~~~~~~~T 65 (192)
+-+++|..-|.|.... .|.+|.+.+-+.+++.+..-+.-|=| ..|.. .... .-.
T Consensus 102 ~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~a-------Rtda~~a~~g---~~~ 171 (295)
T 1s2w_A 102 KLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVA-------RVEAFIAGWG---LDE 171 (295)
T ss_dssp HHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEE-------EECTTTTTCC---HHH
T ss_pred HHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEE-------eehHHhcccc---HHH
Confidence 3457788888886654 57778877777776654311111111 11100 0000 001
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCC-C-CCHHHHHHHHhcCCeEe
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGAS-G-LSAELIKGCIERGVRKF 143 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS-G-~~~e~~~~~i~~Gi~KI 143 (192)
-.+.|+.|. +-|.|++-+= .+.-+.+.+++|.+.++. ++|++.--+. | +| +.+.-++|++-|
T Consensus 172 ai~Ra~ay~-eAGAd~i~~e-----------~~~~~~~~~~~i~~~~~~-~~P~i~~~~~~~~~~---~~eL~~lGv~~v 235 (295)
T 1s2w_A 172 ALKRAEAYR-NAGADAILMH-----------SKKADPSDIEAFMKAWNN-QGPVVIVPTKYYKTP---TDHFRDMGVSMV 235 (295)
T ss_dssp HHHHHHHHH-HTTCSEEEEC-----------CCSSSSHHHHHHHHHHTT-CSCEEECCSTTTTSC---HHHHHHHTCCEE
T ss_pred HHHHHHHHH-HcCCCEEEEc-----------CCCCCHHHHHHHHHHcCC-CCCEEEeCCCCCCCC---HHHHHHcCCcEE
Confidence 124455655 6899988761 012256778888888731 3898876442 2 44 556667799999
Q ss_pred ecchHHHHHHHHHhc
Q 029526 144 NVNTEVRKAYMDSLS 158 (192)
Q Consensus 144 Ni~T~l~~a~~~~~~ 158 (192)
=+...+..+...+++
T Consensus 236 ~~~~~~~raa~~a~~ 250 (295)
T 1s2w_A 236 IWANHNLRASVSAIQ 250 (295)
T ss_dssp EECSHHHHHHHHHHH
T ss_pred EEChHHHHHHHHHHH
Confidence 999988877776654
No 388
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=66.76 E-value=44 Score=28.19 Aligned_cols=105 Identities=15% Similarity=0.202 Sum_probs=67.2
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHH---HHHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQA---EEFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea---~~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .++|=+=.|. +.+++ .+++
T Consensus 42 li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGvg~------------------st~~ai~la~~A 102 (314)
T 3d0c_A 42 LLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RATVVAGIGY------------------SVDTAIELGKSA 102 (314)
T ss_dssp HHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEECS------------------SHHHHHHHHHHH
T ss_pred HHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCeEEecCCc------------------CHHHHHHHHHHH
Confidence 46789999888776 68899999999999988763 4565442222 11233 3346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHH---HHHHhhhccCCccEEee--cCCCCCHHHHHHHHh
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLL---KDLHALSSKKGVLLVLH--GASGLSAELIKGCIE 137 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L---~~I~~~~~~~~iPLVlH--GgSG~~~e~~~~~i~ 137 (192)
++.|+|++-+.-= .|.+ |. +-+++ ++|.+.+ ++|++|+ -|. ++.+.+.+..+
T Consensus 103 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~va~a~---~lPiilYn~tg~-l~~~~~~~La~ 159 (314)
T 3d0c_A 103 IDSGADCVMIHQP----VHPY--IT-DAGAVEYYRNIIEAL---DAPSIIYFKDAH-LSDDVIKELAP 159 (314)
T ss_dssp HHTTCSEEEECCC----CCSC--CC-HHHHHHHHHHHHHHS---SSCEEEEECCTT-SCTHHHHHHTT
T ss_pred HHcCCCEEEECCC----CCCC--CC-HHHHHHHHHHHHHhC---CCCEEEEeCCCC-cCHHHHHHHHc
Confidence 7789998876521 1321 21 12233 4565555 7999996 344 88888887654
No 389
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=66.73 E-value=32 Score=30.47 Aligned_cols=76 Identities=13% Similarity=0.156 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHH
Q 029526 26 HTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLL 105 (192)
Q Consensus 26 ~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L 105 (192)
.-+++.++|+..|+.+=.|+ -| .++.+|+++-++|++=|+=++. -||++|
T Consensus 102 ~~~~L~~~~~~~Gi~~~stp-------------------fD-~~svd~l~~~~vd~~KIgS~~~----------~N~pLL 151 (385)
T 1vli_A 102 WILPLLDYCREKQVIFLSTV-------------------CD-EGSADLLQSTSPSAFKIASYEI----------NHLPLL 151 (385)
T ss_dssp GHHHHHHHHHHTTCEEECBC-------------------CS-HHHHHHHHTTCCSCEEECGGGT----------TCHHHH
T ss_pred HHHHHHHHHHHcCCcEEEcc-------------------CC-HHHHHHHHhcCCCEEEECcccc----------cCHHHH
Confidence 34788899998887664441 22 3567888889999998875554 378999
Q ss_pred HHHHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 106 KDLHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 106 ~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
+++.+. +.|+.|==|-. .-+++..|+
T Consensus 152 ~~va~~----gKPViLStGma-Tl~Ei~~Av 177 (385)
T 1vli_A 152 KYVARL----NRPMIFSTAGA-EISDVHEAW 177 (385)
T ss_dssp HHHHTT----CSCEEEECTTC-CHHHHHHHH
T ss_pred HHHHhc----CCeEEEECCCC-CHHHHHHHH
Confidence 988753 46777765544 556666654
No 390
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=66.57 E-value=27 Score=28.44 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=30.1
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhh
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALS 112 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~ 112 (192)
-+|++|+++ .+ +.|+|++-+= .|++.+-.++++..++|.+..
T Consensus 27 Git~~ed~~-a~-~~gaD~iGfI------f~~~SpR~V~~~~A~~i~~~~ 68 (228)
T 4aaj_A 27 GIKSLEELE-IV-EKHADATGVV------VNSNSKRRIPLEKAREIIENS 68 (228)
T ss_dssp CCCSHHHHH-HH-HTTCSEEEEE------CSSSSTTBCCHHHHHHHHHHC
T ss_pred CCCcHHHHH-HH-HcCCCEEEEE------ecCCCCCCCCHHHHHHHHHhh
Confidence 379999884 66 4699987654 266444568899888887654
No 391
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=66.48 E-value=21 Score=29.73 Aligned_cols=71 Identities=11% Similarity=0.084 Sum_probs=44.2
Q ss_pred CHHHHHHHhhhhCCcEE-EEe-----cCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC
Q 029526 66 DVNQAEEFIDETDIDAL-AVC-----IGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG 139 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~L-Ava-----iGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G 139 (192)
+|.+..+.+++.|+|+| -+. .....|. ...-+++.|++|++.+ ++|+..---.|. .+.++.+.+.|
T Consensus 29 ~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~----~~~~~~~~i~~I~~~~---~iPv~~k~r~g~-~~~~~~~~a~G 100 (305)
T 2nv1_A 29 INAEQAKIAEEAGAVAVMALERVPADIRAAGGV----ARMADPTIVEEVMNAV---SIPVMAKARIGH-IVEARVLEAMG 100 (305)
T ss_dssp SSHHHHHHHHHTTCSEEEECCC-------CCCC----CCCCCHHHHHHHHHHC---SSCEEEEECTTC-HHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc----ccCCCHHHHHHHHHhC---CCCEEecccccc-hHHHHHHHHCC
Confidence 44444444557899998 431 1111111 1223688999998877 699875333343 67788888899
Q ss_pred CeEee
Q 029526 140 VRKFN 144 (192)
Q Consensus 140 i~KIN 144 (192)
+..|-
T Consensus 101 Ad~V~ 105 (305)
T 2nv1_A 101 VDYID 105 (305)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 98885
No 392
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=66.40 E-value=57 Score=27.31 Aligned_cols=108 Identities=17% Similarity=0.185 Sum_probs=70.6
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.++.|.+.+.+=||. |+.+|-.+..+.+++.+.. .+.|=+=.|.. +.+++. +++
T Consensus 45 li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-rvpviaGvg~~-----------------~t~~ai~la~~a 106 (304)
T 3l21_A 45 LVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD-RARVIAGAGTY-----------------DTAHSIRLAKAC 106 (304)
T ss_dssp HHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEECCCS-----------------CHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEeCCCC-----------------CHHHHHHHHHHH
Confidence 467899999988775 5789999999999998864 45554322211 123333 446
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHH---HHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLL---KDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L---~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|-. |. +-+++ ++|.+.+ ++|++|. -|..++.+.+.+..+.
T Consensus 107 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 168 (304)
T 3l21_A 107 AAEGAHGLLVVTP----YYSK--PP-QRGLQAHFTAVADAT---ELPMLLYDIPGRSAVPIEPDTIRALASH 168 (304)
T ss_dssp HHHTCSEEEEECC----CSSC--CC-HHHHHHHHHHHHTSC---SSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred HHcCCCEEEECCC----CCCC--CC-HHHHHHHHHHHHHhc---CCCEEEEeCccccCCCCCHHHHHHHhcC
Confidence 6789999887521 1321 31 22333 4555555 7999999 3788999999988754
No 393
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=66.37 E-value=4.5 Score=31.41 Aligned_cols=73 Identities=11% Similarity=0.116 Sum_probs=50.8
Q ss_pred cCCCHHHHHHHhhhhC--CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC-CHHHHHHHHhcC
Q 029526 63 KLTDVNQAEEFIDETD--IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL-SAELIKGCIERG 139 (192)
Q Consensus 63 ~~T~peea~~Fv~~Tg--vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-~~e~~~~~i~~G 139 (192)
.+++++++.+++++.+ +|++=|..+.. +.. . ++.+++|++... +.|+.+|=...- |+..++.+.+.|
T Consensus 8 d~~~~~~~~~~~~~~~~~v~~iev~~~~~---~~~-g----~~~i~~l~~~~~--~~~i~~~l~~~di~~~~~~~a~~~G 77 (207)
T 3ajx_A 8 DLLSTEAALELAGKVAEYVDIIELGTPLI---KAE-G----LSVITAVKKAHP--DKIVFADMKTMDAGELEADIAFKAG 77 (207)
T ss_dssp CCSCHHHHHHHHHHHGGGCSEEEECHHHH---HHH-C----THHHHHHHHHST--TSEEEEEEEECSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHhhccCCEEEECcHHH---Hhh-C----HHHHHHHHHhCC--CCeEEEEEEecCccHHHHHHHHhCC
Confidence 3688999999998764 58877744421 222 1 346788887652 489988766544 555688999999
Q ss_pred CeEeec
Q 029526 140 VRKFNV 145 (192)
Q Consensus 140 i~KINi 145 (192)
..=|++
T Consensus 78 ad~v~v 83 (207)
T 3ajx_A 78 ADLVTV 83 (207)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998875
No 394
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=66.32 E-value=50 Score=27.68 Aligned_cols=108 Identities=12% Similarity=0.130 Sum_probs=69.7
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|-.+..+.+++.+.. .++|=+=.|. ++.+++. +++
T Consensus 42 li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGvg~-----------------~st~~ai~la~~A 103 (306)
T 1o5k_A 42 QLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGAGT-----------------NSTEKTLKLVKQA 103 (306)
T ss_dssp HHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SCHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcCCC-----------------ccHHHHHHHHHHH
Confidence 47889999998776 68899999999999988763 3444322221 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHH---HHHHhhhccCCccEEee-----cCCCCCHHHHHHHH-hc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLL---KDLHALSSKKGVLLVLH-----GASGLSAELIKGCI-ER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L---~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i-~~ 138 (192)
++.|+|++-+.-= .|.. |. +-+++ ++|.+.+ ++|++|. -|..++.+.+.+.. +.
T Consensus 104 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~~ 166 (306)
T 1o5k_A 104 EKLGANGVLVVTP----YYNK--PT-QEGLYQHYKYISERT---DLGIVVYNVPGRTGVNVLPETAARIAADL 166 (306)
T ss_dssp HHHTCSEEEEECC----CSSC--CC-HHHHHHHHHHHHTTC---SSCEEEEECHHHHSCCCCHHHHHHHHHHC
T ss_pred HhcCCCEEEECCC----CCCC--CC-HHHHHHHHHHHHHhC---CCCEEEEeCccccCcCCCHHHHHHHHHhC
Confidence 6789998877521 2321 21 12333 3455544 7999997 36778999998887 44
No 395
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=66.31 E-value=67 Score=28.05 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=71.4
Q ss_pred hhhhcCCCEeEeeCCC--------CC----HHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHH
Q 029526 2 EAIVLGFDSLMVDGSH--------LP----FKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQ 69 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~--------l~----~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pee 69 (192)
++++.||+.+=+.-.. .+ +++.++..+.|-+..-. ++.+=.+ .+ ..+ ++++
T Consensus 154 ~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~-d~~l~vD---------aN------~~~-~~~~ 216 (412)
T 4e4u_A 154 ENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGS-KADLLFG---------TH------GQM-VPSS 216 (412)
T ss_dssp HHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTT-SSEEEEC---------CC------SCB-CHHH
T ss_pred HHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCC-CCeEEEE---------CC------CCC-CHHH
Confidence 4567899999887431 23 45555555544443321 2322211 10 123 5889
Q ss_pred HHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeec
Q 029526 70 AEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNV 145 (192)
Q Consensus 70 a~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi 145 (192)
|.+|++ +.|++++-- + -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.=||+
T Consensus 217 A~~~~~~L~~~~i~~iEe---------P--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d~v~~ 281 (412)
T 4e4u_A 217 AIRLAKRLEKYDPLWFEE---------P--VPPGQEEAIAQVAKHT---SIPIAT-GERLTTKYEFHKLLQAGGASILQL 281 (412)
T ss_dssp HHHHHHHHGGGCCSEEEC---------C--SCSSCHHHHHHHHHTC---SSCEEE-CTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhhcCCcEEEC---------C--CChhhHHHHHHHHhhC---CCCEEe-cCccCCHHHHHHHHHcCCCCEEEe
Confidence 988855 468888751 1 2334899999999887 699875 56667788899999887 666777
Q ss_pred c
Q 029526 146 N 146 (192)
Q Consensus 146 ~ 146 (192)
.
T Consensus 282 d 282 (412)
T 4e4u_A 282 N 282 (412)
T ss_dssp C
T ss_pred C
Confidence 5
No 396
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=66.30 E-value=1.1 Score=35.61 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=63.4
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC--CCCCHHHHHHHHhcCC
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA--SGLSAELIKGCIERGV 140 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg--SG~~~e~~~~~i~~Gi 140 (192)
.+++.+++.+++++++.+++.+=+|.-|= +.-+ | +.+++|++.. ...+|+=+|=. -..|...++.+.+.|.
T Consensus 7 D~~~l~~~~~~~~~~~~~~~~~kv~~~~f-~~~G-~----~~i~~lr~~~-~~~v~~D~kl~DI~~t~~~~v~~~~~~Ga 79 (208)
T 2czd_A 7 DVYEGERAIKIAKSVKDYISMIKVNWPLI-LGSG-V----DIIRRLKEET-GVEIIADLKLADIPNTNRLIARKVFGAGA 79 (208)
T ss_dssp CCCSHHHHHHHHHHHGGGCSEEEEEHHHH-HHHC-T----THHHHHHHHH-CCEEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHHhcccccEEEecHHHH-HhhC-H----HHHHHHHHcC-CCEEEEEeeeCchHHHHHHHHHHHHhcCC
Confidence 47899999999999999998888888771 2221 2 3567788762 12588888866 5667888889999999
Q ss_pred eEeecchHHHHHHHHHh
Q 029526 141 RKFNVNTEVRKAYMDSL 157 (192)
Q Consensus 141 ~KINi~T~l~~a~~~~~ 157 (192)
.=|++..+.-....+.+
T Consensus 80 d~vtvh~~~g~~~i~~~ 96 (208)
T 2czd_A 80 DYVIVHTFVGRDSVMAV 96 (208)
T ss_dssp SEEEEESTTCHHHHHHH
T ss_pred CEEEEeccCCHHHHHHH
Confidence 98888765533334443
No 397
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=66.20 E-value=56 Score=27.12 Aligned_cols=111 Identities=16% Similarity=0.191 Sum_probs=71.0
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .+.|=+=.|. ++.+++. +..
T Consensus 30 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~-----------------~~t~~ai~la~~A 91 (294)
T 2ehh_A 30 HVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGTGG-----------------NATHEAVHLTAHA 91 (294)
T ss_dssp HHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECCC-----------------SCHHHHHHHHHHH
T ss_pred HHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCC-----------------CCHHHHHHHHHHH
Confidence 47889999999887 67889999999999988764 3554332221 1223443 335
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec-----CCCCCHHHHHHHH-hc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG-----ASGLSAELIKGCI-ER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG-----gSG~~~e~~~~~i-~~ 138 (192)
++.|+|++.+.-= .|....+.==++-.++|.+.+ ++|++|.= |..++.+.+.+.. +.
T Consensus 92 ~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~~ 154 (294)
T 2ehh_A 92 KEVGADGALVVVP----YYNKPTQRGLYEHFKTVAQEV---DIPIIIYNIPSRTCVEISVDTMFKLASEC 154 (294)
T ss_dssp HHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHC---CSCEEEEECHHHHSCCCCHHHHHHHHHHC
T ss_pred HhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhc---CCCEEEEeCCcccCcCCCHHHHHHHHhhC
Confidence 6789998877521 232101110122234566655 79999973 6778999999887 54
No 398
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=66.08 E-value=3.4 Score=34.08 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=48.4
Q ss_pred CCcEEEE-ecCcCCCCCCCCCCCCCHHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHh--cCCeEeecchHHH
Q 029526 78 DIDALAV-CIGNVHGKYPSSGPNLKLDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIE--RGVRKFNVNTEVR 150 (192)
Q Consensus 78 gvD~LAv-aiGt~HG~y~~~~p~ld~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~--~Gi~KINi~T~l~ 150 (192)
++|.+-+ +++---|..+ .+..-+++++++++..+. .++|+..=| |+..+.+.++++ .|+.-+=++|.+.
T Consensus 148 ~~D~vlvMsv~pgfggq~--f~~~~l~ki~~lr~~~~~~~~~~~I~vdG--GI~~~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 148 QIDVIQLLTLDPRNGTKY--PSELILDRVIQVEKRLGNRRVEKLINIDG--SMTLELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp TCSEEEEESEETTTTEEC--CHHHHHHHHHHHHHHHGGGGGGCEEEEES--SCCHHHHHHHHHSSSCCCCEEECGGGG
T ss_pred cCceeeeeeeccCcCCee--cChhHHHHHHHHHHHHHhcCCCceEEEEC--CcCHHHHHHHHHhCCCCcEEEEeeHHh
Confidence 6898855 3322222111 122346777888887642 248999988 788999999999 9999999999886
No 399
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=65.77 E-value=11 Score=25.64 Aligned_cols=67 Identities=18% Similarity=0.106 Sum_probs=46.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.++.++|.+.+++..+|.+-+.+.- |.. -++.++.|++......+|+++-.+..-+.. .++...|+.
T Consensus 33 ~~~~~~a~~~l~~~~~dlii~D~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~--~~~~~~g~~ 100 (127)
T 3i42_A 33 VMSGTDALHAMSTRGYDAVFIDLNL---------PDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDL--GKEACELFD 100 (127)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESBC---------SSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTC--CHHHHHHCS
T ss_pred ECCHHHHHHHHHhcCCCEEEEeCCC---------CCCCHHHHHHHHHhhhccCCCCEEEEECCcchhH--HHHHHHhhH
Confidence 4678999999999999998887521 222 378889998862223699998887766554 556666643
No 400
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=65.72 E-value=50 Score=27.77 Aligned_cols=108 Identities=11% Similarity=0.075 Sum_probs=70.6
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHH---HHHh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQA---EEFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea---~~Fv 74 (192)
.|+.|.+.+.+=||. |+.+|-.+..+.+++.+ . .+.|=+=.|. ++.+++ .+++
T Consensus 38 li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g-rvpViaGvg~-----------------~~t~~ai~la~~A 98 (313)
T 3dz1_A 38 YAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K-SMQVIVGVSA-----------------PGFAAMRRLARLS 98 (313)
T ss_dssp HHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T-TSEEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C-CCcEEEecCC-----------------CCHHHHHHHHHHH
Confidence 467899999987765 68899999999999988 3 5776442221 122333 3446
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCC--ccEEee-----cCCCCCHHHHHHHHh
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKG--VLLVLH-----GASGLSAELIKGCIE 137 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~--iPLVlH-----GgSG~~~e~~~~~i~ 137 (192)
++.|+|++.+. +-. |+.. +.==++-.++|.+.+ + +|++|. -|..++.+.+.+..+
T Consensus 99 ~~~Gadavlv~--~P~--~~~s-~~~l~~~f~~va~a~---~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 99 MDAGAAGVMIA--PPP--SLRT-DEQITTYFRQATEAI---GDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHTCSEEEEC--CCT--TCCS-HHHHHHHHHHHHHHH---CTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHcCCCEEEEC--CCC--CCCC-HHHHHHHHHHHHHhC---CCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 67899998773 222 3321 111122345666666 6 999996 577899999998874
No 401
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=65.39 E-value=14 Score=31.37 Aligned_cols=59 Identities=24% Similarity=0.310 Sum_probs=36.4
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHh--CCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHS--KGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~--~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
+|+++|-+.||+|- ++.+ ..+++++..+. ..+.+|+= |-| . |+.+.+ +.+|||
T Consensus 208 eA~~aGaD~I~LDn--~~~e----~l~~av~~l~~~~~~v~ieAS-GGI---t--------------~eni~~-~a~tGV 262 (285)
T 1o4u_A 208 RAVEAGADIVMLDN--LSPE----EVKDISRRIKDINPNVIVEVS-GGI---T--------------EENVSL-YDFETV 262 (285)
T ss_dssp HHHHTTCSEEEEES--CCHH----HHHHHHHHHHHHCTTSEEEEE-ECC---C--------------TTTGGG-GCCTTC
T ss_pred HHHHcCCCEEEECC--CCHH----HHHHHHHHhhccCCCceEEEE-CCC---C--------------HHHHHH-HHHcCC
Confidence 68899999999998 4443 34455555543 14777764 222 1 122333 458999
Q ss_pred cEEEEe
Q 029526 80 DALAVC 85 (192)
Q Consensus 80 D~LAva 85 (192)
|.++++
T Consensus 263 D~IsvG 268 (285)
T 1o4u_A 263 DVISSS 268 (285)
T ss_dssp CEEEEG
T ss_pred CEEEEe
Confidence 988754
No 402
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=65.27 E-value=33 Score=24.13 Aligned_cols=68 Identities=12% Similarity=0.199 Sum_probs=50.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++++++.+.+++...|++-+.+.- |.. -+++++.|++... .+|+++=.+... .+...++.+.|+.-
T Consensus 37 ~~~~~~a~~~l~~~~~dlii~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~ls~~~~-~~~~~~~~~~g~~~ 104 (153)
T 3cz5_A 37 AADAGEAYRLYRETTPDIVVMDLTL---------PGPGGIEATRHIRQWDG--AARILIFTMHQG-SAFALKAFEAGASG 104 (153)
T ss_dssp ESSHHHHHHHHHTTCCSEEEECSCC---------SSSCHHHHHHHHHHHCT--TCCEEEEESCCS-HHHHHHHHHTTCSE
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCC---------CCCCHHHHHHHHHHhCC--CCeEEEEECCCC-HHHHHHHHHCCCcE
Confidence 5788999999999999988876422 111 3788899988743 588888776544 56788899999764
Q ss_pred e
Q 029526 143 F 143 (192)
Q Consensus 143 I 143 (192)
+
T Consensus 105 ~ 105 (153)
T 3cz5_A 105 Y 105 (153)
T ss_dssp E
T ss_pred E
Confidence 3
No 403
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=65.24 E-value=7.5 Score=30.70 Aligned_cols=134 Identities=13% Similarity=0.045 Sum_probs=0.0
Q ss_pred hhhhcCCCEeEee-CCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVD-GSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D-~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.+-++||+.|-+. ...++.--.-...+++.+.+.++|+.+-+ ++.-..-... .....+......+.+.++..+.|++
T Consensus 22 ~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~i~~a~~lG~~ 99 (278)
T 1i60_A 22 LCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLA-LNALVFFNNR-DEKGHNEIITEFKGMMETCKTLGVK 99 (278)
T ss_dssp HHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEE-EEEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeee-eccccccccC-CHHHHHHHHHHHHHHHHHHHHcCCC
Q ss_pred EEEEecCcCCCCCC-CCCCCCCHHHHHHHHhhhccCCccEEeecCCCC-----CHHHHHHHHh
Q 029526 81 ALAVCIGNVHGKYP-SSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL-----SAELIKGCIE 137 (192)
Q Consensus 81 ~LAvaiGt~HG~y~-~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~-----~~e~~~~~i~ 137 (192)
.+-+.-|...+.++ ...-..-.+.|+++.+...+.+|.|++|=-.+. +.+++.+.++
T Consensus 100 ~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~ 162 (278)
T 1i60_A 100 YVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVN 162 (278)
T ss_dssp EEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHH
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHH
No 404
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=65.24 E-value=17 Score=27.04 Aligned_cols=67 Identities=13% Similarity=0.185 Sum_probs=49.8
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCC-CCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPN-LKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~-ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.++...+|.+-+-+.- |. =-+++++.|++... .+|+++--+.. ..+...++.+.|+.-
T Consensus 37 ~~~~~~al~~~~~~~~dlvl~D~~l---------p~~~g~~~~~~l~~~~~--~~~ii~lt~~~-~~~~~~~a~~~Ga~~ 104 (184)
T 3rqi_A 37 AHNKDEALKLAGAEKFEFITVXLHL---------GNDSGLSLIAPLCDLQP--DARILVLTGYA-SIATAVQAVKDGADN 104 (184)
T ss_dssp ECSHHHHHHHHTTSCCSEEEECSEE---------TTEESHHHHHHHHHHCT--TCEEEEEESSC-CHHHHHHHHHHTCSE
T ss_pred eCCHHHHHHHHhhCCCCEEEEeccC---------CCccHHHHHHHHHhcCC--CCCEEEEeCCC-CHHHHHHHHHhCHHH
Confidence 4778999999999999988876421 11 13788999988643 68998887765 456688899999743
No 405
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=65.14 E-value=56 Score=27.54 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=70.6
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|-.+..+.+++.+.. .+.|=+=.|. ++.+++. +++
T Consensus 53 li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~-----------------~st~eai~la~~A 114 (314)
T 3qze_A 53 HLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGTGA-----------------NSTREAVALTEAA 114 (314)
T ss_dssp HHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCC-----------------cCHHHHHHHHHHH
Confidence 46788998888766 46789999999999998864 3555332111 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCC--CHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNL--KLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~l--d~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|-. |.- =++-.++|.+.+ ++|++|. -|..++.+.+.+..+.
T Consensus 115 ~~~Gadavlv~~P----~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 176 (314)
T 3qze_A 115 KSGGADACLLVTP----YYNK--PTQEGMYQHFRHIAEAV---AIPQILYNVPGRTSCDMLPETVERLSKV 176 (314)
T ss_dssp HHTTCSEEEEECC----CSSC--CCHHHHHHHHHHHHHHS---CSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred HHcCCCEEEEcCC----CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEeCccccCCCCCHHHHHHHhcC
Confidence 6789998877521 1321 321 122335566655 7999998 4788999999988764
No 406
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=65.09 E-value=26 Score=24.35 Aligned_cols=70 Identities=14% Similarity=0.236 Sum_probs=49.9
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
..+++++|.+.+++...|++-+.+.- |.. -+++++.|++......+|+++-.+.. ..+...++.+.|+.
T Consensus 36 ~~~~~~~a~~~l~~~~~dlii~D~~l---------~~~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~~~~~~~~~ga~ 105 (144)
T 3kht_A 36 FVDNGAKALYQVQQAKYDLIILDIGL---------PIANGFEVMSAVRKPGANQHTPIVILTDNV-SDDRAKQCMAAGAS 105 (144)
T ss_dssp EESSHHHHHHHHTTCCCSEEEECTTC---------GGGCHHHHHHHHHSSSTTTTCCEEEEETTC-CHHHHHHHHHTTCS
T ss_pred EECCHHHHHHHhhcCCCCEEEEeCCC---------CCCCHHHHHHHHHhcccccCCCEEEEeCCC-CHHHHHHHHHcCCC
Confidence 35788999999999999988876421 222 26888889872112269999887654 45668888899965
Q ss_pred E
Q 029526 142 K 142 (192)
Q Consensus 142 K 142 (192)
-
T Consensus 106 ~ 106 (144)
T 3kht_A 106 S 106 (144)
T ss_dssp E
T ss_pred E
Confidence 4
No 407
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=64.92 E-value=25 Score=22.84 Aligned_cols=65 Identities=18% Similarity=0.091 Sum_probs=44.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.++++++.+.++....|.+-+.+.. |.. .+++++.|++......+|+++-.+..-+. ++.+.|+.
T Consensus 31 ~~~~~~~~~~l~~~~~dlii~d~~~---------~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~----~~~~~g~~ 96 (119)
T 2j48_A 31 LVDGSTALDQLDLLQPIVILMAWPP---------PDQSCLLLLQHLREHQADPHPPLVLFLGEPPVD----PLLTAQAS 96 (119)
T ss_dssp ESCHHHHHHHHHHHCCSEEEEECST---------TCCTHHHHHHHHHHTCCCSSCCCEEEESSCCSS----HHHHHHCS
T ss_pred ecCHHHHHHHHHhcCCCEEEEecCC---------CCCCHHHHHHHHHhccccCCCCEEEEeCCCCch----hhhhcCHH
Confidence 4678899999999999988877532 111 36788889876421268988877766554 55555654
No 408
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=64.87 E-value=37 Score=24.52 Aligned_cols=67 Identities=19% Similarity=0.168 Sum_probs=49.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCC-HHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLS-AELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~-~e~~~~~i~~Gi~ 141 (192)
.+++++|.+.+++..+|++-+-+.- |.. -+++++.|++.. ++|+++-.+..-+ .+.+.++.+.|+.
T Consensus 57 ~~~~~~al~~l~~~~~dlvilD~~l---------~~~~g~~l~~~lr~~~---~~~ii~~s~~~~~~~~~~~~~~~~ga~ 124 (164)
T 3t8y_A 57 AKDGLEAVEKAIELKPDVITMDIEM---------PNLNGIEALKLIMKKA---PTRVIMVSSLTEEGAAITIEALRNGAV 124 (164)
T ss_dssp ESSHHHHHHHHHHHCCSEEEECSSC---------SSSCHHHHHHHHHHHS---CCEEEEEESSCCTTCHHHHHHHHTTCC
T ss_pred cCCHHHHHHHhccCCCCEEEEeCCC---------CCCCHHHHHHHHHhcC---CceEEEEecCCccchHHHHHHHHcCcC
Confidence 5788999999999999988876521 222 278889998765 4888887765544 3457788999975
Q ss_pred E
Q 029526 142 K 142 (192)
Q Consensus 142 K 142 (192)
-
T Consensus 125 ~ 125 (164)
T 3t8y_A 125 D 125 (164)
T ss_dssp E
T ss_pred E
Confidence 4
No 409
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=64.47 E-value=11 Score=26.09 Aligned_cols=70 Identities=20% Similarity=0.224 Sum_probs=47.3
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++.++|.+.+++...|++-+.+.- |.. -++.++.|++......+|+++-.+...+.+...++.+.|+.-
T Consensus 36 ~~~~~~a~~~l~~~~~dlvi~d~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~ 106 (140)
T 3grc_A 36 VHSAAQALEQVARRPYAAMTVDLNL---------PDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVST 106 (140)
T ss_dssp ECSHHHHHHHHHHSCCSEEEECSCC---------SSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCE
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCCC---------CCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCE
Confidence 4678999999999999998886421 222 378889998732223699998876653333322777888653
No 410
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=64.35 E-value=35 Score=30.03 Aligned_cols=67 Identities=12% Similarity=-0.031 Sum_probs=49.2
Q ss_pred CHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 66 DVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 66 ~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
++++|.+|++ +-|++++--- -|.-|++-+++|++.+ ++|++. |.|=.+.++++++++.| +.
T Consensus 239 ~~~~A~~~~~~L~~~~i~~iEqP-----------~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~i~~~a~d 303 (425)
T 3vcn_A 239 TPIEAARLGKDLEPYRLFWLEDS-----------VPAENQAGFRLIRQHT---TTPLAV-GEIFAHVWDAKQLIEEQLID 303 (425)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECC-----------SCCSSTTHHHHHHHHC---CSCEEE-CTTCCSGGGTHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEECC-----------CChhhHHHHHHHHhcC---CCCEEe-CCCcCCHHHHHHHHHcCCCC
Confidence 5889988855 4688888521 1334788899999988 699776 55556777899999887 66
Q ss_pred Eeecch
Q 029526 142 KFNVNT 147 (192)
Q Consensus 142 KINi~T 147 (192)
=||+..
T Consensus 304 ~v~~k~ 309 (425)
T 3vcn_A 304 YLRATV 309 (425)
T ss_dssp EECCCT
T ss_pred eEecCh
Confidence 777764
No 411
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=64.35 E-value=14 Score=25.34 Aligned_cols=67 Identities=16% Similarity=0.253 Sum_probs=46.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++...|.+-+.+.- |.. -++.++.|++... .+|+++-.+...+ +...++.+.|+.-
T Consensus 32 ~~~~~~a~~~~~~~~~dlii~d~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~-~~~~~~~~~g~~~ 99 (134)
T 3f6c_A 32 LTEGGSAVQRVETLKPDIVIIDVDI---------PGVNGIQVLETLRKRQY--SGIIIIVSAKNDH-FYGKHCADAGANG 99 (134)
T ss_dssp ESSSTTHHHHHHHHCCSEEEEETTC---------SSSCHHHHHHHHHHTTC--CSEEEEEECC----CTHHHHHHTTCSE
T ss_pred cCCHHHHHHHHHhcCCCEEEEecCC---------CCCChHHHHHHHHhcCC--CCeEEEEeCCCCh-HHHHHHHHhCCCE
Confidence 4566788999999999999887522 222 2788899987653 6888887665533 4577888999653
No 412
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=64.32 E-value=31 Score=23.76 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=48.4
Q ss_pred cCCCHHHHHHHhhh----------hCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHH
Q 029526 63 KLTDVNQAEEFIDE----------TDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAEL 131 (192)
Q Consensus 63 ~~T~peea~~Fv~~----------TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~ 131 (192)
..+++++|.++++. ...|.+-+.+.- |..+ ++.++.|++......+|+++=.++.. .+.
T Consensus 37 ~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~-~~~ 106 (149)
T 1k66_A 37 RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL---------PGTDGREVLQEIKQDEVLKKIPVVIMTTSSN-PKD 106 (149)
T ss_dssp EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC---------SSSCHHHHHHHHTTSTTGGGSCEEEEESCCC-HHH
T ss_pred EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCC---------CCCCHHHHHHHHHhCcccCCCeEEEEeCCCC-HHH
Confidence 35788999999987 778988876421 2222 67888888753112589888766653 566
Q ss_pred HHHHHhcCCeE
Q 029526 132 IKGCIERGVRK 142 (192)
Q Consensus 132 ~~~~i~~Gi~K 142 (192)
..++.+.|+.-
T Consensus 107 ~~~~~~~g~~~ 117 (149)
T 1k66_A 107 IEICYSYSISS 117 (149)
T ss_dssp HHHHHHTTCSE
T ss_pred HHHHHHCCCCE
Confidence 78888888654
No 413
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=64.31 E-value=4.6 Score=34.02 Aligned_cols=71 Identities=20% Similarity=0.280 Sum_probs=50.8
Q ss_pred HHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc---CCeEeec
Q 029526 69 QAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER---GVRKFNV 145 (192)
Q Consensus 69 ea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~---Gi~KINi 145 (192)
++.+|+++-|+|++.+|.-|+|-.. |.+|++.. ++|++ |+-+.-++.+.+. +..||=+
T Consensus 77 ~~~~~L~~~g~d~IVIACNTa~~~a-----------l~~lr~~~---~iPvi-----giiepa~~~a~~~~~t~~~~IGV 137 (274)
T 3uhf_A 77 EALDFFEQFQIDMLIIACNTASAYA-----------LDALRAKA---HFPVY-----GVIDAGVEATIKALHDKNKEILV 137 (274)
T ss_dssp HHHHHHTTSCCSEEEECCHHHHHHS-----------HHHHHHHC---SSCEE-----CSHHHHHHHHHHHHCCTTSCEEE
T ss_pred HHHHHHHHCCCCEEEEeCCChhHHH-----------HHHHHHhc---CCCEE-----cCCHHHHHHHHHhcccCCCeEEE
Confidence 4556777889999999999998421 56788877 69987 7777778888775 6777754
Q ss_pred -chHH---HHHHHHHhc
Q 029526 146 -NTEV---RKAYMDSLS 158 (192)
Q Consensus 146 -~T~l---~~a~~~~~~ 158 (192)
+|.. ...|.+.+.
T Consensus 138 LaT~~Ti~s~~Y~~~l~ 154 (274)
T 3uhf_A 138 IATKATIKSEEYQKRLL 154 (274)
T ss_dssp EECHHHHHHTHHHHHHH
T ss_pred EeccccccHHHHHHHHH
Confidence 5543 235666654
No 414
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=64.29 E-value=45 Score=25.33 Aligned_cols=69 Identities=10% Similarity=0.172 Sum_probs=50.6
Q ss_pred CCCHHHHHHHhhhh-------------CCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhc--cCCccEEeecCCCC
Q 029526 64 LTDVNQAEEFIDET-------------DIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSS--KKGVLLVLHGASGL 127 (192)
Q Consensus 64 ~T~peea~~Fv~~T-------------gvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~--~~~iPLVlHGgSG~ 127 (192)
.++.++|.+++++. .+|++-+-+.- |.. -+++++.|++... ...+|+++=-+...
T Consensus 92 a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~l---------p~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~ 162 (206)
T 3mm4_A 92 CDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQM---------PEMDGYEATREIRKVEKSYGVRTPIIAVSGHDP 162 (206)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCC---------SSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCC
T ss_pred eCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCC---------CCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCC
Confidence 46889999998875 78988877521 222 2788899987521 12699999887776
Q ss_pred CHHHHHHHHhcCCe
Q 029526 128 SAELIKGCIERGVR 141 (192)
Q Consensus 128 ~~e~~~~~i~~Gi~ 141 (192)
..+...++.+.|+.
T Consensus 163 ~~~~~~~~~~~Ga~ 176 (206)
T 3mm4_A 163 GSEEARETIQAGMD 176 (206)
T ss_dssp CHHHHHHHHHHTCS
T ss_pred cHHHHHHHHhCCCC
Confidence 77888999999965
No 415
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=64.27 E-value=5.6 Score=34.31 Aligned_cols=96 Identities=14% Similarity=0.194 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHh---hhhCCc-EEEEecCcCCCCCCCCCCCCC
Q 029526 26 HTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFI---DETDID-ALAVCIGNVHGKYPSSGPNLK 101 (192)
Q Consensus 26 ~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv---~~TgvD-~LAvaiGt~HG~y~~~~p~ld 101 (192)
.|+++.+.|++.|..|=| + ..++.|.++-.+ ++.+-. .|.+|-|.. .|.+ .
T Consensus 14 ~~~~ll~~A~~~~yAV~A----f--------------Nv~n~e~~~Avl~AAee~~sPvIlq~s~g~~--~y~g--~--- 68 (306)
T 3pm6_A 14 RALPLLTFARTHSFAIPA----I--------------CVYNLEGILAIIRAAEHKRSPAMILLFPWAI--QYAD--S--- 68 (306)
T ss_dssp SSHHHHHHHHHTTCCEEE----E--------------ECSSHHHHHHHHHHHHHTTCCEEEEECHHHH--HHHT--T---
T ss_pred HHHHHHHHHHHCCcEEEE----E--------------eeCCHHHHHHHHHHHHHhCCCEEEEcChhHH--hhcc--H---
Confidence 578888888887655422 1 123444544443 345543 445555543 3532 1
Q ss_pred HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc--------CCeEeecch
Q 029526 102 LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER--------GVRKFNVNT 147 (192)
Q Consensus 102 ~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~--------Gi~KINi~T 147 (192)
..+..+++.....+||++||=-.|-+.+.+++|++. |.+-|-|+-
T Consensus 69 -~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDg 121 (306)
T 3pm6_A 69 -LLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDM 121 (306)
T ss_dssp -HHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEECC
T ss_pred -HHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeC
Confidence 223334333333479999999999999999999999 888887753
No 416
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=64.26 E-value=9 Score=29.39 Aligned_cols=48 Identities=15% Similarity=0.228 Sum_probs=36.3
Q ss_pred CHHHHHHHhhhhCCcEEEEecCcCCCC---------CCCC---C---CCCCHHHHHHHHhhhc
Q 029526 66 DVNQAEEFIDETDIDALAVCIGNVHGK---------YPSS---G---PNLKLDLLKDLHALSS 113 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAvaiGt~HG~---------y~~~---~---p~ld~~~L~~I~~~~~ 113 (192)
++.++.+.+++.||...+|.||+..|. |... . ..+|.+.|++|.+.+.
T Consensus 127 ~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~g 189 (218)
T 3ibs_A 127 GAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGK 189 (218)
T ss_dssp CHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTE
T ss_pred cHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcC
Confidence 588888889999999999999997543 2110 0 1678889999988773
No 417
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=64.22 E-value=39 Score=25.36 Aligned_cols=67 Identities=21% Similarity=0.284 Sum_probs=49.4
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.++...+|.+-+-+.- |..+ +++++.|++... .+|+++-.++.- .+...++.+.|+.-
T Consensus 37 ~~~~~~al~~~~~~~~dlvllD~~l---------p~~~g~~~~~~lr~~~~--~~~ii~ls~~~~-~~~~~~~~~~Ga~~ 104 (215)
T 1a04_A 37 ASNGEQGIELAESLDPDLILLDLNM---------PGMNGLETLDKLREKSL--SGRIVVFSVSNH-EEDVVTALKRGADG 104 (215)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEETTS---------TTSCHHHHHHHHHHSCC--CSEEEEEECCCC-HHHHHHHHHTTCSE
T ss_pred eCCHHHHHHHHHhcCCCEEEEeCCC---------CCCcHHHHHHHHHHhCC--CCcEEEEECCCC-HHHHHHHHHcCCcE
Confidence 5788999999999999998887531 2222 788899987642 588888776654 56678888888753
No 418
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=64.21 E-value=8.6 Score=33.43 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=55.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCC-CeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKG-MLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~g-v~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.++..|+|+|+--++..|...+....+.+.+.+...| +.+-.- |.+..... ... +++..++++ .|++
T Consensus 126 ~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~~~~~~~-------~~~---~~~~~~l~~-~g~~ 193 (467)
T 1xrt_A 126 CAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPT-GTITKGRK-------GKE---IADFYSLKE-AGCV 193 (467)
T ss_dssp HHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEC-BCSBGGGC-------SSS---BCCHHHHHH-HTCC
T ss_pred HHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEE-eeecCCCC-------ccc---HHHHHHHHH-cCCE
Confidence 4688999999877665554444444455666666656 444211 11111000 011 234445554 4655
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCC
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGAS 125 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS 125 (192)
+ ++ .||. +..+.+.|+++-+...+.+.|+.+|-..
T Consensus 194 ~----i~-~~~~-----~~~~~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 194 A----FT-DDGS-----PVMDSSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp C----BC-CTTS-----CCCCHHHHHHHHHHHHHHTCEEEECCCG
T ss_pred E----EE-cCCC-----CCCCHHHHHHHHHHHHhcCCEEEEECCC
Confidence 3 33 2443 3356777777766555557999999754
No 419
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=64.11 E-value=12 Score=32.12 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=0.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|+++|.+.||+|--.+ ...+++|++. .-.+.+|+-=|- +++.+.+|. +||||.
T Consensus 224 eAl~aGaD~I~LDn~~~------~~l~~av~~i-~~~v~ieaSGGI------------------~~~~i~~~a-~tGVD~ 277 (298)
T 3gnn_A 224 TALAHGARSVLLDNFTL------DMMRDAVRVT-EGRAVLEVSGGV------------------NFDTVRAIA-ETGVDR 277 (298)
T ss_dssp HHHHTTCEEEEEESCCH------HHHHHHHHHH-TTSEEEEEESSC------------------STTTHHHHH-HTTCSE
T ss_pred HHHHcCCCEEEECCCCH------HHHHHHHHHh-CCCCeEEEEcCC------------------CHHHHHHHH-HcCCCE
Q ss_pred EEEecCcCCCCCCCCCCCCCH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKL 102 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~ 102 (192)
+.|.--|.+ .|.+||
T Consensus 278 isvG~lt~s------a~~lD~ 292 (298)
T 3gnn_A 278 ISIGALTKD------VRATDY 292 (298)
T ss_dssp EECGGGGTS------CCCCCE
T ss_pred EEECCeecC------CCccce
No 420
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=63.93 E-value=18 Score=30.88 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=48.4
Q ss_pred CHHHHHHHhhhhCCcEEEEe---cC-cCCCCCCCCCCCCCHH----HHHHHHhhhccCCccEEeecCCCC-CHHH----H
Q 029526 66 DVNQAEEFIDETDIDALAVC---IG-NVHGKYPSSGPNLKLD----LLKDLHALSSKKGVLLVLHGASGL-SAEL----I 132 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAva---iG-t~HG~y~~~~p~ld~~----~L~~I~~~~~~~~iPLVlHGgSG~-~~e~----~ 132 (192)
|+-.|+- +++.|+|+|.++ ++ +++| |+.. -.+.++ .++.|.+.+ ++|++.=+-+|- +.++ +
T Consensus 31 D~~sA~l-~e~aGf~ai~vs~~s~a~~~~G-~pD~-~~vt~~em~~~~~~I~r~~---~~PviaD~d~Gyg~~~~v~~~v 104 (298)
T 3eoo_A 31 TAYAAKM-AEAVGFKAVYLSGGGVAANSLG-IPDL-GISTMDDVLVDANRITNAT---NLPLLVDIDTGWGGAFNIARTI 104 (298)
T ss_dssp SHHHHHH-HHHHTCSCEEECHHHHHHHTTC-CCSS-SCCCHHHHHHHHHHHHHHC---CSCEEEECTTCSSSHHHHHHHH
T ss_pred CHHHHHH-HHHcCCCEEEECcHHHHHHhcC-CCCC-CCCCHHHHHHHHHHHHhhc---CCeEEEECCCCCCCHHHHHHHH
Confidence 5556665 688999999996 33 6788 5432 334433 334454444 799998776664 3333 5
Q ss_pred HHHHhcCCeEeec
Q 029526 133 KGCIERGVRKFNV 145 (192)
Q Consensus 133 ~~~i~~Gi~KINi 145 (192)
++.++.|+.=||+
T Consensus 105 ~~l~~aGaagv~i 117 (298)
T 3eoo_A 105 RSFIKAGVGAVHL 117 (298)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHhCCeEEEE
Confidence 6677899998887
No 421
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=63.63 E-value=10 Score=33.10 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 98 PNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 98 p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
|.+.++.++.|++.+ ++|+++-|- .+.++.+++.+.|+.=|-+
T Consensus 202 ~~~~w~~i~~lr~~~---~~PvivK~v--~~~e~A~~a~~~GaD~I~v 244 (352)
T 3sgz_A 202 ASFCWNDLSLLQSIT---RLPIILKGI--LTKEDAELAMKHNVQGIVV 244 (352)
T ss_dssp TTCCHHHHHHHHHHC---CSCEEEEEE--CSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHhc---CCCEEEEec--CcHHHHHHHHHcCCCEEEE
Confidence 789999999999988 699999987 5678899999999888866
No 422
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=63.60 E-value=65 Score=26.93 Aligned_cols=111 Identities=15% Similarity=0.162 Sum_probs=71.2
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|-.+..+.+++.+.. .+.|=+=.|. .+.+++. +..
T Consensus 41 li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg~-----------------~~t~~ai~la~~A 102 (303)
T 2wkj_A 41 NIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG-KIKLIAHVGC-----------------VSTAESQQLAASA 102 (303)
T ss_dssp HHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCC-----------------CCHHHHHHHHHHH
Confidence 47889999999887 57889999999999988764 4555442221 1223333 345
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCC-ccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKG-VLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~-iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++-+.-= .|....+.==++-.++|.+.+ + +|++|. -|..++.+.+.+..+.
T Consensus 103 ~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~---~~lPiilYn~P~~tg~~l~~~~~~~La~~ 165 (303)
T 2wkj_A 103 KRYGFDAVSAVTP----FYYPFSFEEHCDHYRAIIDSA---DGLPMVVYNIPALSGVKLTLDQINTLVTL 165 (303)
T ss_dssp HHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHH---TTCCEEEEECHHHHCCCCCHHHHHHHHTS
T ss_pred HhCCCCEEEecCC----CCCCCCHHHHHHHHHHHHHhC---CCCCEEEEeCccccCCCCCHHHHHHHhcC
Confidence 6789998877521 132101110122234666666 6 999996 3677899999888654
No 423
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=63.59 E-value=17 Score=23.97 Aligned_cols=63 Identities=21% Similarity=0.387 Sum_probs=41.1
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC---CCCCHHHHHHHHh
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA---SGLSAELIKGCIE 137 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg---SG~~~e~~~~~i~ 137 (192)
..++.++++.|++.--+-|-... +.-+-+...++.+......+|.+.++| .|.+++++++.++
T Consensus 26 ~~~~~~L~~~gi~~~~~~v~~~~-------~~~~~~~~~~l~~~~g~~~vP~l~~~g~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 26 KRTLEFLKREGVDFEVIWIDKLE-------GEERKKVIEKVHSISGSYSVPVVVKGDKHVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHHHHHHHTCCCEEEEGGGCC-------HHHHHHHHHHHHHHHSSSCSCEEEETTEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEeeeCC-------ccchHHHHHHHHHhcCCCCcCEEEECCEEEeCCCHHHHHHHhc
Confidence 78999999999887666654321 111222234554444333699999988 5888999888764
No 424
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=63.50 E-value=32 Score=23.31 Aligned_cols=70 Identities=14% Similarity=0.160 Sum_probs=49.2
Q ss_pred cCCCHHHHHHHhhh-------hCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHH
Q 029526 63 KLTDVNQAEEFIDE-------TDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKG 134 (192)
Q Consensus 63 ~~T~peea~~Fv~~-------TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~ 134 (192)
..+++++|.+.++. ...|.+-+.+.- |.. -+++++.|++......+|+++=.++.. .+...+
T Consensus 33 ~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~---------~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~-~~~~~~ 102 (140)
T 1k68_A 33 TVRDGMEAMAYLRQEGEYANASRPDLILLXLNL---------PKKDGREVLAEIKSDPTLKRIPVVVLSTSIN-EDDIFH 102 (140)
T ss_dssp EECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC---------SSSCHHHHHHHHHHSTTGGGSCEEEEESCCC-HHHHHH
T ss_pred EECCHHHHHHHHHcccccccCCCCcEEEEecCC---------CcccHHHHHHHHHcCcccccccEEEEecCCc-HHHHHH
Confidence 35788999999987 678988876432 222 378889998853112589888776654 566778
Q ss_pred HHhcCCeE
Q 029526 135 CIERGVRK 142 (192)
Q Consensus 135 ~i~~Gi~K 142 (192)
+.+.|+.-
T Consensus 103 ~~~~g~~~ 110 (140)
T 1k68_A 103 SYDLHVNC 110 (140)
T ss_dssp HHHTTCSE
T ss_pred HHHhchhh
Confidence 88888654
No 425
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=63.41 E-value=36 Score=23.94 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=47.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-Ce
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~ 141 (192)
.+++++|.+.++...+|++-+.+.- |.. -+++++.|++... .+|+++=.+..- .+...++++.| +.
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l---------~~~~g~~~~~~l~~~~~--~~~ii~ls~~~~-~~~~~~~~~~g~~~ 104 (154)
T 2rjn_A 37 FTSPLDALEALKGTSVQLVISDMRM---------PEMGGEVFLEQVAKSYP--DIERVVISGYAD-AQATIDAVNRGKIS 104 (154)
T ss_dssp ESCHHHHHHHHTTSCCSEEEEESSC---------SSSCHHHHHHHHHHHCT--TSEEEEEECGGG-HHHHHHHHHTTCCS
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCC---------CCCCHHHHHHHHHHhCC--CCcEEEEecCCC-HHHHHHHHhccchh
Confidence 5778999999999999999887532 222 2678889987643 689888766553 56677888887 53
No 426
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=63.15 E-value=23 Score=30.03 Aligned_cols=124 Identities=13% Similarity=0.157 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccccCCCC--Ccc--c--------cccccCCCH---------HHHHHHhhhhCC
Q 029526 21 KDNISHTKYISFLAHSKGMLVEAELGRLSGTEDG--LTV--E--------DYEAKLTDV---------NQAEEFIDETDI 79 (192)
Q Consensus 21 eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~--~~~--~--------~~~~~~T~p---------eea~~Fv~~Tgv 79 (192)
++.|..-|++++.+|+.|..+=..|.|.|..... ... + ..-..+|.- .+|.+-+.+.|.
T Consensus 79 d~~~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGf 158 (338)
T 1z41_A 79 DEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGF 158 (338)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6778888999999999999999999887632110 000 0 000012221 234444556799
Q ss_pred cEEEEecCcC--------------CCCCCCC---CCCCCHHHHHHHHhhhccCCccEEeecC------CCCCHHH----H
Q 029526 80 DALAVCIGNV--------------HGKYPSS---GPNLKLDLLKDLHALSSKKGVLLVLHGA------SGLSAEL----I 132 (192)
Q Consensus 80 D~LAvaiGt~--------------HG~y~~~---~p~ld~~~L~~I~~~~~~~~iPLVlHGg------SG~~~e~----~ 132 (192)
|.+=+-.|+= -..|-+. .+.+-.++++.|++.+ ++|+.+-=+ .|.+.++ .
T Consensus 159 DgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v---~~pv~vris~~~~~~~g~~~~~~~~~a 235 (338)
T 1z41_A 159 DVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW---DGPLFVRVSASDYTDKGLDIADHIGFA 235 (338)
T ss_dssp SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEEEECCCCSTTSCCHHHHHHHH
T ss_pred CEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc---CCcEEEEecCcccCCCCCCHHHHHHHH
Confidence 9998876530 0112210 1223367778888877 577665311 1555554 3
Q ss_pred HHHHhcCCeEeecch
Q 029526 133 KGCIERGVRKFNVNT 147 (192)
Q Consensus 133 ~~~i~~Gi~KINi~T 147 (192)
+++.+.|+.-|++..
T Consensus 236 ~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 236 KWMKEQGVDLIDCSS 250 (338)
T ss_dssp HHHHHTTCCEEEEEC
T ss_pred HHHHHcCCCEEEEec
Confidence 456688999999753
No 427
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=63.14 E-value=28 Score=27.80 Aligned_cols=72 Identities=21% Similarity=0.272 Sum_probs=51.3
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEe-ecCC-----CCCHH--------
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVL-HGAS-----GLSAE-------- 130 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVl-HGgS-----G~~~e-------- 130 (192)
.+++++.+++++.|.|.+-+..... +.++.+.++++++..++.++.++. |+.. +.|++
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~--------~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~ 88 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASPL--------PFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKA 88 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTTG--------GGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecCccc--------CCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHH
Confidence 4789999999999999999986531 334566677888877666888776 7642 12222
Q ss_pred ----HHHHHHhcCCeEee
Q 029526 131 ----LIKGCIERGVRKFN 144 (192)
Q Consensus 131 ----~~~~~i~~Gi~KIN 144 (192)
.++.|-.+|+..|+
T Consensus 89 ~~~~~i~~a~~lG~~~v~ 106 (294)
T 3vni_A 89 FYTDLLKRLYKLDVHLIG 106 (294)
T ss_dssp HHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhCCCeee
Confidence 24446688999997
No 428
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=63.12 E-value=21 Score=30.93 Aligned_cols=58 Identities=22% Similarity=0.320 Sum_probs=0.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|+++|.+.||+|-- +....++++++.. -.+.+|+- |. -+++.+.+|.+ ||||.
T Consensus 246 eAl~aGaD~I~LDn~------~~~~l~~av~~l~-~~v~ieaS-----GG-------------It~~~I~~~a~-tGVD~ 299 (320)
T 3paj_A 246 EAISAGADIIMLDNF------SLEMMREAVKINA-GRAALENS-----GN-------------ITLDNLKECAE-TGVDY 299 (320)
T ss_dssp HHHHTTCSEEEEESC------CHHHHHHHHHHHT-TSSEEEEE-----SS-------------CCHHHHHHHHT-TTCSE
T ss_pred HHHHcCCCEEEECCC------CHHHHHHHHHHhC-CCCeEEEE-----CC-------------CCHHHHHHHHH-cCCCE
Q ss_pred EEEe
Q 029526 82 LAVC 85 (192)
Q Consensus 82 LAva 85 (192)
+.+.
T Consensus 300 isvG 303 (320)
T 3paj_A 300 ISVG 303 (320)
T ss_dssp EECT
T ss_pred EEEC
No 429
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=62.94 E-value=33 Score=23.44 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=50.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKF 143 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KI 143 (192)
.++.+++.+.+++...|.+-+.+.--.+.... .. -+++++.|++... .+|+++-.+.. ..+...++.+.|+.-+
T Consensus 33 ~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~-~~--g~~~~~~l~~~~~--~~~ii~ls~~~-~~~~~~~~~~~g~~~~ 106 (140)
T 2qr3_A 33 LSSPVSLSTVLREENPEVVLLDMNFTSGINNG-NE--GLFWLHEIKRQYR--DLPVVLFTAYA-DIDLAVRGIKEGASDF 106 (140)
T ss_dssp ECCHHHHHHHHHHSCEEEEEEETTTTC------CC--HHHHHHHHHHHCT--TCCEEEEEEGG-GHHHHHHHHHTTCCEE
T ss_pred eCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCC-cc--HHHHHHHHHhhCc--CCCEEEEECCC-CHHHHHHHHHcCchhe
Confidence 46789999999999999988876432111101 11 3678889987643 68988887654 3567788899997543
No 430
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=62.94 E-value=37 Score=23.85 Aligned_cols=70 Identities=16% Similarity=0.270 Sum_probs=48.5
Q ss_pred cCCCHHHHHHHhh---------hhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHH
Q 029526 63 KLTDVNQAEEFID---------ETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELI 132 (192)
Q Consensus 63 ~~T~peea~~Fv~---------~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~ 132 (192)
..+++++|.++++ ....|.+-+-+.- |.. -+++++.|++......+|+++--++. ..+..
T Consensus 35 ~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l---------~~~~g~~~~~~lr~~~~~~~~pii~~t~~~-~~~~~ 104 (152)
T 3heb_A 35 AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNL---------PDMTGIDILKLVKENPHTRRSPVVILTTTD-DQREI 104 (152)
T ss_dssp EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBC---------SSSBHHHHHHHHHHSTTTTTSCEEEEESCC-CHHHH
T ss_pred EeCCHHHHHHHHhccccccccccCCCCEEEEeCCC---------CCCcHHHHHHHHHhcccccCCCEEEEecCC-CHHHH
Confidence 3578899999995 5678888876522 222 37888999883212368998887765 45567
Q ss_pred HHHHhcCCeE
Q 029526 133 KGCIERGVRK 142 (192)
Q Consensus 133 ~~~i~~Gi~K 142 (192)
.++.+.|+.-
T Consensus 105 ~~~~~~g~~~ 114 (152)
T 3heb_A 105 QRCYDLGANV 114 (152)
T ss_dssp HHHHHTTCSE
T ss_pred HHHHHCCCcE
Confidence 8888998754
No 431
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=62.93 E-value=33 Score=27.17 Aligned_cols=67 Identities=21% Similarity=0.307 Sum_probs=48.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++.++|.+.+++..+|.+-+-+. .|.. -++++++|++... .+|+++..+...+ +...++.+.|+.-
T Consensus 159 a~~~~eal~~l~~~~~dlvl~D~~---------mp~~~G~~l~~~ir~~~~--~~piI~lt~~~~~-~~~~~~~~~G~~~ 226 (254)
T 2ayx_A 159 ANDGVDALNVLSKNHIDIVLSDVN---------MPNMDGYRLTQRIRQLGL--TLPVIGVTANALA-EEKQRCLESGMDS 226 (254)
T ss_dssp ECCSHHHHHHHHHSCCSEEEEEES---------SCSSCCHHHHHHHHHHHC--CSCEEEEESSTTS-HHHHHHHHCCCEE
T ss_pred ECCHHHHHHHHHhCCCCEEEEcCC---------CCCCCHHHHHHHHHhcCC--CCcEEEEECCCCH-HHHHHHHHcCCce
Confidence 467788888888888887776642 1222 3788999988653 6999998777654 4577888988653
No 432
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=62.93 E-value=11 Score=32.32 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=58.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCC-CeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKG-MLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~g-v~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
.++..|+|+++-.....|...+....+.+.+.+...+ +.+ .-.|.+..... ...+.. ..++++ .|+.
T Consensus 79 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~l~~---~~~l~~-~G~~ 146 (428)
T 3mpg_A 79 AAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNV-LPYGAITVRQA-------GSEMTD---FETLKE-LGAF 146 (428)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEE-EECEESBGGGC-------SSSBCC---HHHHHH-TTCC
T ss_pred HHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEE-EEEeeEecCCC-------cchHHH---HHHHHH-hCCE
Confidence 4678899999887777777666666777777776655 333 11122211100 112222 334443 3654
Q ss_pred EEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCC
Q 029526 81 ALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASG 126 (192)
Q Consensus 81 ~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG 126 (192)
.+ +.|+. +..+.+.|.++-+..++.+.|+.+|-...
T Consensus 147 ~~-----~~~~~-----~~~~~~~l~~~~~~a~~~g~~v~vH~~~~ 182 (428)
T 3mpg_A 147 AF-----TDDGV-----GVQDASMMLAAMKRAAKLNMAVVAHCEEN 182 (428)
T ss_dssp CE-----ECTTS-----CCCCHHHHHHHHHHHHHTTCCEEECCCCG
T ss_pred EE-----ECCCc-----CCCCHHHHHHHHHHHHhcCCeEEEECCCh
Confidence 33 23443 33467777777666655689999998653
No 433
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=62.83 E-value=13 Score=31.08 Aligned_cols=62 Identities=18% Similarity=0.171 Sum_probs=46.0
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEeec-
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFNV- 145 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KINi- 145 (192)
.++.+|+++.|+|++.++.-|+|-. -+.++++.+ ++|++ |+.+.-++.+.+ .+..||=|
T Consensus 74 ~~~~~~L~~~g~d~IVIaCNTas~~-----------~l~~lr~~~---~iPVi-----gi~e~a~~~A~~~~~~~rIgVL 134 (286)
T 2jfq_A 74 VEIARKLMEFDIKMLVIACNTATAV-----------ALEYLQKTL---SISVI-----GVIEPGARTAIMTTRNQNVLVL 134 (286)
T ss_dssp HHHHHHHTTSCCSEEEECCHHHHHH-----------HHHHHHHHC---SSEEE-----ESHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCchhHH-----------HHHHHHHhC---CCCEE-----eccHHHHHHHHHhcCCCEEEEE
Confidence 5667788888999999999998731 156777777 69965 445666777776 57778888
Q ss_pred chH
Q 029526 146 NTE 148 (192)
Q Consensus 146 ~T~ 148 (192)
+|.
T Consensus 135 aT~ 137 (286)
T 2jfq_A 135 GTE 137 (286)
T ss_dssp ECH
T ss_pred eCh
Confidence 665
No 434
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=62.81 E-value=35 Score=28.24 Aligned_cols=74 Identities=18% Similarity=0.257 Sum_probs=47.4
Q ss_pred HHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHH
Q 029526 28 KYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKD 107 (192)
Q Consensus 28 k~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~ 107 (192)
+.+.++|++.|+.+=.| .-||+. .+|+.+. +|++.|+=+|. -++++|++
T Consensus 77 ~~l~~~~~~~Gl~~~te-------------------~~d~~~-~~~l~~~-vd~~kIga~~~----------~n~~ll~~ 125 (262)
T 1zco_A 77 RWMREAADEYGLVTVTE-------------------VMDTRH-VELVAKY-SDILQIGARNS----------QNFELLKE 125 (262)
T ss_dssp HHHHHHHHHHTCEEEEE-------------------CCCGGG-HHHHHHH-CSEEEECGGGT----------TCHHHHHH
T ss_pred HHHHHHHHHcCCcEEEe-------------------eCCHHh-HHHHHhh-CCEEEECcccc----------cCHHHHHH
Confidence 44455566666666554 123334 4556566 89999986665 26888888
Q ss_pred HHhhhccCCccEEeecCCCCCHHHHHHHH
Q 029526 108 LHALSSKKGVLLVLHGASGLSAELIKGCI 136 (192)
Q Consensus 108 I~~~~~~~~iPLVlHGgSG~~~e~~~~~i 136 (192)
+.+ + +.|+.|==|...+.+++..|+
T Consensus 126 ~a~-~---~kPV~lk~G~~~t~~e~~~Av 150 (262)
T 1zco_A 126 VGK-V---ENPVLLKRGMGNTIQELLYSA 150 (262)
T ss_dssp HTT-S---SSCEEEECCTTCCHHHHHHHH
T ss_pred HHh-c---CCcEEEecCCCCCHHHHHHHH
Confidence 876 3 689888655554556666665
No 435
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=62.73 E-value=49 Score=27.57 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=48.9
Q ss_pred CCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCC-CH-HHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhc
Q 029526 64 LTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNL-KL-DLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIER 138 (192)
Q Consensus 64 ~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~l-d~-~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~ 138 (192)
.-++++..++ +++.|+|.+-+..+.. +...|.+ |+ ++++.+.+ ..++|+.+|= -..+++++++++
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~----~~~~~~~~d~~~~~~~~~~---~~~~~~~~l~---~~~~~i~~a~~a 95 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVS----PKWVPQMAGSAEVFAGIRQ---RPGVTYAALA---PNLKGFEAALES 95 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSC----TTTCGGGTTHHHHHHHSCC---CTTSEEEEEC---CSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcC----ccccccccCHHHHHHHhhh---cCCCEEEEEe---CCHHHHHHHHhC
Confidence 4466776665 4568999998865322 2112322 33 23344433 2368999887 367899999999
Q ss_pred CCeEeecchHH
Q 029526 139 GVRKFNVNTEV 149 (192)
Q Consensus 139 Gi~KINi~T~l 149 (192)
|+..|++....
T Consensus 96 G~~~v~i~~~~ 106 (302)
T 2ftp_A 96 GVKEVAVFAAA 106 (302)
T ss_dssp TCCEEEEEEES
T ss_pred CcCEEEEEEec
Confidence 99999985433
No 436
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=62.67 E-value=5.3 Score=31.29 Aligned_cols=47 Identities=15% Similarity=0.283 Sum_probs=35.3
Q ss_pred HHHHHHHHhhhcc--CCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 102 LDLLKDLHALSSK--KGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 102 ~~~L~~I~~~~~~--~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
++.++++++.+.. .++|+++=||-. .++++++++.|..-+=+++.+.
T Consensus 154 ~~~i~~~~~~~~~~~~~~~i~v~GGI~--~~~~~~~~~~Gad~vvvGsai~ 202 (220)
T 2fli_A 154 LEKVATVAKWRDEKGLSFDIEVDGGVD--NKTIRACYEAGANVFVAGSYLF 202 (220)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEESSCC--TTTHHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEECcCC--HHHHHHHHHcCCCEEEEChHHh
Confidence 3556666665521 158999999544 6889999999999999999885
No 437
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=62.24 E-value=32 Score=22.89 Aligned_cols=67 Identities=19% Similarity=0.337 Sum_probs=48.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++++++.+.++....|.+-+.+.- |.. -++.++.|++... .+|+++-.++.- .+...++.+.|+.-
T Consensus 33 ~~~~~~a~~~~~~~~~dlil~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~~-~~~~~~~~~~g~~~ 100 (120)
T 1tmy_A 33 ATNGREAVEKYKELKPDIVTMDITM---------PEMNGIDAIKEIMKIDP--NAKIIVCSAMGQ-QAMVIEAIKAGAKD 100 (120)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEECSC---------GGGCHHHHHHHHHHHCT--TCCEEEEECTTC-HHHHHHHHHTTCCE
T ss_pred ECCHHHHHHHHHhcCCCEEEEeCCC---------CCCcHHHHHHHHHhhCC--CCeEEEEeCCCC-HHHHHHHHHhCcce
Confidence 4677899999998889988877532 222 2678888887643 589888776654 45677888888754
No 438
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=62.22 E-value=72 Score=26.98 Aligned_cols=110 Identities=15% Similarity=0.084 Sum_probs=65.9
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhh---hhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFID---ETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~---~Tg 78 (192)
++++.||+.+=+..+ .++.++..+.|.+......+.|.+ + ..| ++++ .+|++ +-+
T Consensus 151 ~~~~~G~~~iKik~~---~~~d~~~v~avr~a~~~~~l~vDa--------n---------~~~-~~~~-~~~~~~l~~~~ 208 (369)
T 2zc8_A 151 RHLEEGYRRIKLKIK---PGWDYEVLKAVREAFPEATLTADA--------N---------SAY-SLAN-LAQLKRLDELR 208 (369)
T ss_dssp HHHHTTCSCEEEECB---TTBSHHHHHHHHHHCTTSCEEEEC--------T---------TCC-CGGG-HHHHHGGGGGC
T ss_pred HHHHhhhheeeeecC---hhHHHHHHHHHHHHcCCCeEEEec--------C---------CCC-CHHH-HHHHHHHHhCC
Confidence 456778888777654 134444444443332112222222 1 123 3455 66654 456
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchH
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTE 148 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~ 148 (192)
++++= .+ -|.-|++-+++|++.+ ++|++.-+. =...++++++++.| +.=||+...
T Consensus 209 i~~iE----------qP-~~~~d~~~~~~l~~~~---~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~ 264 (369)
T 2zc8_A 209 LDYIE----------QP-LAYDDLLDHAKLQREL---STPICLDES-LTGAEKARKAIELGAGRVFNVKPA 264 (369)
T ss_dssp CSCEE----------CC-SCTTCSHHHHHHHHHC---SSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CcEEE----------CC-CCcccHHHHHHHHhhC---CCCEEEcCc-cCCHHHHHHHHHhCCCCEEEEchh
Confidence 77665 11 2445888899999887 699887555 46778999999888 566887543
No 439
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=62.17 E-value=28 Score=24.06 Aligned_cols=67 Identities=18% Similarity=0.277 Sum_probs=49.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.+++...|++-+.+ ..+. --+++++.|++... .+|+++-.+.. ..+...++.+.|+.-
T Consensus 34 ~~~~~~a~~~l~~~~~dlvi~d~--~~~~-------~g~~~~~~l~~~~~--~~pii~ls~~~-~~~~~~~~~~~g~~~ 100 (142)
T 2qxy_A 34 AKNEQEAFTFLRREKIDLVFVDV--FEGE-------ESLNLIRRIREEFP--DTKVAVLSAYV-DKDLIINSVKAGAVD 100 (142)
T ss_dssp ESSHHHHHHHHTTSCCSEEEEEC--TTTH-------HHHHHHHHHHHHCT--TCEEEEEESCC-CHHHHHHHHHHTCSC
T ss_pred ECCHHHHHHHHhccCCCEEEEeC--CCCC-------cHHHHHHHHHHHCC--CCCEEEEECCC-CHHHHHHHHHCCcce
Confidence 57789999999999999998886 2110 12677888887643 69999887765 456688888888653
No 440
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=62.16 E-value=44 Score=27.82 Aligned_cols=75 Identities=13% Similarity=0.210 Sum_probs=48.4
Q ss_pred CCCHHHHHHHhh---hhCCcEEEEec----CcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCC-----------
Q 029526 64 LTDVNQAEEFID---ETDIDALAVCI----GNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGAS----------- 125 (192)
Q Consensus 64 ~T~peea~~Fv~---~TgvD~LAvai----Gt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS----------- 125 (192)
..+++++.++++ +.|.|.+-+.. .+.|+ +.+ .+..+.+.|+++-+...+.++|+..|-..
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~-~~g-~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~g 239 (408)
T 3be7_A 162 VDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNT-DVN-AKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKAG 239 (408)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSC-CTT-SBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCC-CCC-CCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC
Confidence 457888888876 45888776543 23332 222 36678888888776555557898888542
Q ss_pred --------CCCHHHHHHHHhcCC
Q 029526 126 --------GLSAELIKGCIERGV 140 (192)
Q Consensus 126 --------G~~~e~~~~~i~~Gi 140 (192)
.++++.++++.+.|+
T Consensus 240 ~~~i~H~~~~~~~~i~~~~~~g~ 262 (408)
T 3be7_A 240 VDSVEHASFIDDETIDMAIKNNT 262 (408)
T ss_dssp CSEEEECTTCCHHHHHHHHHTTC
T ss_pred CCEEEECCCCCHHHHHHHHHCCC
Confidence 345566666666665
No 441
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=62.11 E-value=55 Score=26.39 Aligned_cols=121 Identities=15% Similarity=0.114 Sum_probs=79.1
Q ss_pred hhhhcCCCEeE--eeCCCC---CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHH---HHHHH
Q 029526 2 EAIVLGFDSLM--VDGSHL---PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVN---QAEEF 73 (192)
Q Consensus 2 ~ai~~GFtSVM--~D~S~l---~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pe---ea~~F 73 (192)
+|++.|-+-|- ++-+.+ .+++-++.-+++++.|+..++.|=-|.+.+ | ++ .|-+-
T Consensus 79 ~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l----------------~-~e~i~~a~~i 141 (220)
T 1ub3_A 79 LACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYF----------------S-PEEIARLAEA 141 (220)
T ss_dssp HHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS----------------C-HHHHHHHHHH
T ss_pred HHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCC----------------C-HHHHHHHHHH
Confidence 57888876553 333322 566677777888888886666655555443 2 33 45555
Q ss_pred hhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHH
Q 029526 74 IDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 74 v~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l 149 (192)
..+-|.|++=.|-|-.- + ...+ |+++++ +.+ ..++|+..=||.- +.+++.+.++.|...|=.+...
T Consensus 142 a~eaGADfVKTsTGf~~----~-gat~~dv~~m~---~~v-g~~v~VkaaGGir-t~~~al~~i~aGa~RiG~S~g~ 208 (220)
T 1ub3_A 142 AIRGGADFLKTSTGFGP----R-GASLEDVALLV---RVA-QGRAQVKAAGGIR-DRETALRMLKAGASRLGTSSGV 208 (220)
T ss_dssp HHHHTCSEEECCCSSSS----C-CCCHHHHHHHH---HHH-TTSSEEEEESSCC-SHHHHHHHHHTTCSEEEETTHH
T ss_pred HHHhCCCEEEeCCCCCC----C-CCCHHHHHHHH---Hhh-CCCCeEEEECCCC-CHHHHHHHHHCCCcccchhHHH
Confidence 66789999998865431 1 1222 444444 444 2369999999988 6788999999999977655544
No 442
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=61.73 E-value=10 Score=30.91 Aligned_cols=62 Identities=19% Similarity=0.255 Sum_probs=45.3
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh---cCCeEee
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE---RGVRKFN 144 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~---~Gi~KIN 144 (192)
.++.+|+++.|+|++.++..|+|-. . +.++++.+ ++|++ |+.+.-++.+++ .+..||=
T Consensus 52 ~~~~~~L~~~g~d~iviaCNTa~~~---~--------~~~lr~~~---~iPvi-----gii~~av~~A~~~~~~~~~rig 112 (255)
T 2jfz_A 52 LEALDFFKPHEIELLIVACNTASAL---A--------LEEMQKYS---KIPIV-----GVIEPSILAIKRQVEDKNAPIL 112 (255)
T ss_dssp HHHHHHHGGGCCSCEEECCHHHHHH---T--------HHHHHHHC---SSCEE-----CSSHHHHHHHHHHCCCTTSCEE
T ss_pred HHHHHHHHHCCCCEEEEeCchhhHH---H--------HHHHHHhC---CCCEE-----eeeHHHHHHHHHhhcCCCCEEE
Confidence 4566777788999999999999831 1 56777777 69976 556667777776 4677887
Q ss_pred c-chH
Q 029526 145 V-NTE 148 (192)
Q Consensus 145 i-~T~ 148 (192)
| .|.
T Consensus 113 VlaT~ 117 (255)
T 2jfz_A 113 VLGTK 117 (255)
T ss_dssp EEECH
T ss_pred EEECH
Confidence 7 654
No 443
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=61.72 E-value=23 Score=28.14 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=23.1
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEecc
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELG 46 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG 46 (192)
+|.++|++.| +|.+..++..+.+. +.+++..+|+.|=.=+|
T Consensus 41 ~~~~~Gv~~i-v~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~G 81 (291)
T 1bf6_A 41 DLMTRGVRNV-IEMTNRYMGRNAQF---MLDVMRETGINVVACTG 81 (291)
T ss_dssp HHHHTTEEEE-EECCCGGGTCCHHH---HHHHHHHHCCEEEEEEC
T ss_pred HHHHcCCCEE-EecCCCcCCCCHHH---HHHHHHhcCCeEEEeec
Confidence 4567899998 57665444444443 34455666655543333
No 444
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=61.65 E-value=9.4 Score=31.49 Aligned_cols=74 Identities=18% Similarity=0.295 Sum_probs=48.6
Q ss_pred HHHHHHhhh-hCCcEEEEecCcCC---C-C-CCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC--HHHHHHHHhcC
Q 029526 68 NQAEEFIDE-TDIDALAVCIGNVH---G-K-YPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS--AELIKGCIERG 139 (192)
Q Consensus 68 eea~~Fv~~-TgvD~LAvaiGt~H---G-~-y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~--~e~~~~~i~~G 139 (192)
.++.+.+++ .|+|.+-+.++.-+ | . |-. .|.+-.+.++++++.+ ++|+.+.-..++. .+..+++.+.|
T Consensus 114 ~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~-~~~~~~eii~~v~~~~---~~pv~vk~~~~~~~~~~~a~~l~~~G 189 (311)
T 1ep3_A 114 VAVCAKIGDAANVKAIELNISCPNVKHGGQAFGT-DPEVAAALVKACKAVS---KVPLYVKLSPNVTDIVPIAKAVEAAG 189 (311)
T ss_dssp HHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGG-CHHHHHHHHHHHHHHC---SSCEEEEECSCSSCSHHHHHHHHHTT
T ss_pred HHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcC-CHHHHHHHHHHHHHhc---CCCEEEEECCChHHHHHHHHHHHHcC
Confidence 345555666 89999999887432 1 1 111 2333356667777666 6999887654543 56678899999
Q ss_pred CeEeec
Q 029526 140 VRKFNV 145 (192)
Q Consensus 140 i~KINi 145 (192)
+.=|.+
T Consensus 190 ~d~i~v 195 (311)
T 1ep3_A 190 ADGLTM 195 (311)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988877
No 445
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=61.40 E-value=33 Score=22.86 Aligned_cols=68 Identities=18% Similarity=0.083 Sum_probs=42.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.++.+++.+.++....|.+-+.+.- |.. -+++++.|++......+|+++-.+... .+...++.+.|+.
T Consensus 31 ~~~~~~a~~~~~~~~~dlvi~D~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~ 99 (124)
T 1mb3_A 31 TREGLSALSIARENKPDLILMDIQL---------PEISGLEVTKWLKEDDDLAHIPVVAVTAFAM-KGDEERIREGGCE 99 (124)
T ss_dssp ESCHHHHHHHHHHHCCSEEEEESBC---------SSSBHHHHHHHHHHSTTTTTSCEEEEC-------CHHHHHHHTCS
T ss_pred eCCHHHHHHHHhcCCCCEEEEeCCC---------CCCCHHHHHHHHHcCccccCCcEEEEECCCC-HHHHHHHHhCCCC
Confidence 3567899999988899998887532 222 267888898742222589888766543 3445667777764
No 446
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=61.19 E-value=57 Score=27.56 Aligned_cols=99 Identities=14% Similarity=0.098 Sum_probs=48.8
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCH----HHHHHHhhhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDV----NQAEEFIDET 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~p----eea~~Fv~~T 77 (192)
++++.|+|+|. |....+ ..+.+.+...|+.+=.-.+.++.... ...++ +++.+|+++-
T Consensus 118 ~~l~~GvTtv~-d~~~~~--------~~~~~~~~~~g~r~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 179 (447)
T 4f0r_A 118 EMIRGGTTTIN-DMYFYN--------AAVARAGLASGMRTFVGCSILEFPTN---------YASNADDYIAKGMAERSQF 179 (447)
T ss_dssp HHHHTTEEEEE-ECBSCH--------HHHHHHHHHHTCEEEEEEEECSSCCS---------SCSSHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEE-EcccCH--------HHHHHHHHHcCCeEEEEchhcCCCcc---------cccCHHHHHHHHHHHHHHh
Confidence 46788999885 432221 23445555556544333333311000 11222 3444555442
Q ss_pred -CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC
Q 029526 78 -DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 78 -gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
+.+.+.+.++ -|+. +....+.|+++-+..++.++|+.+|-.
T Consensus 180 ~~~~~i~~~~~-~~~~-----~~~~~~~l~~~~~~A~~~g~~v~iH~~ 221 (447)
T 4f0r_A 180 LGEDLLTFTLA-PHAP-----YTVSDDTFRKVVTLAEQEDMLIHCHIH 221 (447)
T ss_dssp TTCTTEEEEEE-ECCG-----GGSCHHHHHHHHHHHHHHTCCEEEEES
T ss_pred cCCCceEEEEe-cCCC-----CCCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 4455555432 2333 234566666665555445778887764
No 447
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=61.11 E-value=15 Score=31.20 Aligned_cols=77 Identities=13% Similarity=0.184 Sum_probs=49.6
Q ss_pred CHHHHHHHhhhhCCcEEEEe---cCcCCCCCCCCCCCCCHHH-HHHHHhhhccCCccEEeecCCCC-CHH----HHHHHH
Q 029526 66 DVNQAEEFIDETDIDALAVC---IGNVHGKYPSSGPNLKLDL-LKDLHALSSKKGVLLVLHGASGL-SAE----LIKGCI 136 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAva---iGt~HG~y~~~~p~ld~~~-L~~I~~~~~~~~iPLVlHGgSG~-~~e----~~~~~i 136 (192)
|+-.|+- +++.|+|+|.++ +++++| |+.. -.+.++- +..++..++..++|++.=+-+|- +.+ .+++.+
T Consensus 24 D~~sA~~-~~~aG~~ai~vs~~~~a~~~G-~pD~-~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~ 100 (290)
T 2hjp_A 24 NPLVAKL-AEQAGFGGIWGSGFELSASYA-VPDA-NILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYE 100 (290)
T ss_dssp SHHHHHH-HHHHTCSEEEECHHHHHHHTT-SCTT-TCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHH
T ss_pred CHHHHHH-HHHcCCCEEEEChHHHHHhCC-CCCC-CCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHH
Confidence 4444544 668999999998 677777 4432 3345543 33444444444799988776663 333 456678
Q ss_pred hcCCeEeec
Q 029526 137 ERGVRKFNV 145 (192)
Q Consensus 137 ~~Gi~KINi 145 (192)
+.|+.=||+
T Consensus 101 ~aGa~gv~i 109 (290)
T 2hjp_A 101 AAGASAIVM 109 (290)
T ss_dssp HHTCSEEEE
T ss_pred HhCCeEEEE
Confidence 899999987
No 448
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=60.80 E-value=65 Score=28.30 Aligned_cols=114 Identities=11% Similarity=0.001 Sum_probs=0.0
Q ss_pred hhhhcCCCEeEeeCCCCC------------------------------HHHHHHHHHHHHHHHHhCCCeEEEeccccccC
Q 029526 2 EAIVLGFDSLMVDGSHLP------------------------------FKDNISHTKYISFLAHSKGMLVEAELGRLSGT 51 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~------------------------------~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~ 51 (192)
++++.||+.+=+.-..-+ .++.++...++++..++ ..
T Consensus 159 ~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~-------------a~ 225 (426)
T 4e4f_A 159 KHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRD-------------KF 225 (426)
T ss_dssp HHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHH-------------HH
T ss_pred HHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH-------------Hh
Q ss_pred CCCCccccccccCCCHHHHHHH---hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC
Q 029526 52 EDGLTVEDYEAKLTDVNQAEEF---IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS 128 (192)
Q Consensus 52 e~~~~~~~~~~~~T~peea~~F---v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~ 128 (192)
.++..---+...--++++|.+| +++.|++++- .+ -|.-|++-+++|++.+ ++|+++ |.|=.+
T Consensus 226 G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------eP-~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~ 290 (426)
T 4e4f_A 226 GFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME----------DP-TPAENQACFRLIRQHT---VTPIAV-GEVFNS 290 (426)
T ss_dssp TTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE----------CC-SCCSSGGGGHHHHTTC---CSCEEE-CTTCCS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE----------CC-CChHHHHHHHHHHhcC---CCCEEe-CCCcCC
Q ss_pred HHHHHHHHhcCCeEe
Q 029526 129 AELIKGCIERGVRKF 143 (192)
Q Consensus 129 ~e~~~~~i~~Gi~KI 143 (192)
.++++++++.|-+-+
T Consensus 291 ~~~~~~~i~~ga~d~ 305 (426)
T 4e4f_A 291 IWDCKQLIEEQLIDY 305 (426)
T ss_dssp GGGTHHHHHTTCCSE
T ss_pred HHHHHHHHHcCCCCE
No 449
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=60.78 E-value=12 Score=31.96 Aligned_cols=49 Identities=6% Similarity=0.167 Sum_probs=40.0
Q ss_pred CCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 100 LKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 100 ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
.+++.+++|++.+. ..+|+..=||-.. .|+++++++.|..+|-++|.+.
T Consensus 212 v~~e~V~~I~~~~~-~~iPV~vGGGIrs-~Eda~~ll~aGAD~VVVGSAav 260 (286)
T 3vk5_A 212 VPPEVVRHFRKGLG-PDQVLFVSGNVRS-GRQVTEYLDSGADYVGFAGALE 260 (286)
T ss_dssp CCHHHHHHHHHHSC-TTCEEEEESSCCS-HHHHHHHHHTTCSEEEESGGGS
T ss_pred CCHHHHHHHHHhcC-CCCCEEEEeCCCC-HHHHHHHHHcCCCEEEECchhh
Confidence 57899999998771 0399999887654 4679999999999999999873
No 450
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=60.77 E-value=14 Score=31.57 Aligned_cols=70 Identities=23% Similarity=0.343 Sum_probs=42.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcE
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDA 81 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~ 81 (192)
+|+++|.+.||+|- ++.+ ++ ++++++.+. .+.+|+- |-| +++.+.+|. +||||.
T Consensus 213 eAl~aGaD~I~LDn--~~~~-~l---~~av~~~~~-~v~ieaS-GGI-----------------t~~~i~~~a-~tGVD~ 266 (287)
T 3tqv_A 213 QAIAAKADIVMLDN--FSGE-DI---DIAVSIARG-KVALEVS-GNI-----------------DRNSIVAIA-KTGVDF 266 (287)
T ss_dssp HHHHTTCSEEEEES--CCHH-HH---HHHHHHHTT-TCEEEEE-SSC-----------------CTTTHHHHH-TTTCSE
T ss_pred HHHHcCCCEEEEcC--CCHH-HH---HHHHHhhcC-CceEEEE-CCC-----------------CHHHHHHHH-HcCCCE
Confidence 68999999999997 4443 34 445555442 4777764 211 234555544 899998
Q ss_pred EEEecCcCCCCCCCCCCCCCHH
Q 029526 82 LAVCIGNVHGKYPSSGPNLKLD 103 (192)
Q Consensus 82 LAvaiGt~HG~y~~~~p~ld~~ 103 (192)
+.+ |... .+ .|.|||.
T Consensus 267 Isv--Galt---~s-a~~lD~s 282 (287)
T 3tqv_A 267 ISV--GAIT---KH-IKAIDLS 282 (287)
T ss_dssp EEC--SHHH---HS-BCCCCEE
T ss_pred EEE--Chhh---cC-CcccceE
Confidence 765 5542 11 3556654
No 451
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=60.69 E-value=54 Score=25.79 Aligned_cols=136 Identities=14% Similarity=0.102 Sum_probs=72.2
Q ss_pred hhhhcCCCEeEeeC-CCC-----CH-HHHHHHHHHHHHHHHhCCC-eEEEeccccccCCCCCccccccccCCCHHHHHHH
Q 029526 2 EAIVLGFDSLMVDG-SHL-----PF-KDNISHTKYISFLAHSKGM-LVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEF 73 (192)
Q Consensus 2 ~ai~~GFtSVM~D~-S~l-----~~-eeNi~~Tk~vv~~Ah~~gv-~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~F 73 (192)
.|-++||+.|-+=. +.. ++ ++ ..+++.+.+.++|+ .+=.-......-.. .....+.......++.++
T Consensus 22 ~~~~~G~~~vEl~~~~~~~~~~~~~~~~---~~~~~~~~~~~~gl~~~~~h~~~~~~l~s--~~~~r~~~~~~~~~~i~~ 96 (270)
T 3aam_A 22 EATALGLTAFQIFAKSPRSWRPRALSPA---EVEAFRALREASGGLPAVIHASYLVNLGA--EGELWEKSVASLADDLEK 96 (270)
T ss_dssp HHHHHTCSCEEEESSCTTCCSCCCCCHH---HHHHHHHHHHHTTCCCEEEECCTTCCTTC--SSTHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEeCCCCCcCcCCCCCHH---HHHHHHHHHHHcCCceEEEecCcccCCCC--CHHHHHHHHHHHHHHHHH
Confidence 46678999997622 110 11 33 34567777888888 33221111100000 000011123344566777
Q ss_pred hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhc-cCCccEEeecCCC------CCHHHHHHHHhcCCeEeecc
Q 029526 74 IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSS-KKGVLLVLHGASG------LSAELIKGCIERGVRKFNVN 146 (192)
Q Consensus 74 v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~-~~~iPLVlHGgSG------~~~e~~~~~i~~Gi~KINi~ 146 (192)
.++.|+..+-+-.|.. + +..-.+.|+++.+... ..++.|+|+=-.| .+.+++.+.++.==.+++++
T Consensus 97 a~~lGa~~vv~h~g~~-----~--~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~vg~~lD 169 (270)
T 3aam_A 97 AALLGVEYVVVHPGSG-----R--PERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVADTPLQVCLD 169 (270)
T ss_dssp HHHHTCCEEEECCCBS-----C--HHHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHHTTSSCEEEEE
T ss_pred HHHcCCCEEEECCCCC-----C--HHHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHHHhCCEEEEEe
Confidence 7888999886544432 1 2223455566666654 4579999975432 26777777765423466666
Q ss_pred hHH
Q 029526 147 TEV 149 (192)
Q Consensus 147 T~l 149 (192)
|.-
T Consensus 170 ~~H 172 (270)
T 3aam_A 170 TCH 172 (270)
T ss_dssp HHH
T ss_pred hhh
Confidence 653
No 452
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=60.62 E-value=25 Score=27.55 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=51.3
Q ss_pred hhhcCCCEeEeeCCC---CCHHHH-HHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhC
Q 029526 3 AIVLGFDSLMVDGSH---LPFKDN-ISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETD 78 (192)
Q Consensus 3 ai~~GFtSVM~D~S~---l~~eeN-i~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~Tg 78 (192)
|-++|...|.+=... -.++.- ++.-+++.++|.++||.+=-|--. .+ ...+.+++++.+++++++
T Consensus 94 a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~---~~--------~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 94 AQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLG---FR--------VSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCC---ST--------TCSCCCHHHHHHHHHHHT
T ss_pred HHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecC---CC--------cccccCHHHHHHHHHHhC
Confidence 344566655542111 224444 566677778888777766555321 00 125689999999999999
Q ss_pred CcEEEEecCcCCCCC
Q 029526 79 IDALAVCIGNVHGKY 93 (192)
Q Consensus 79 vD~LAvaiGt~HG~y 93 (192)
+.+-+.+-+.|=.+
T Consensus 163 -~~~g~~~D~~h~~~ 176 (272)
T 2q02_A 163 -SPFKVLLDTFHHHL 176 (272)
T ss_dssp -CCCEEEEEHHHHHH
T ss_pred -cCeEEEEEchHhhc
Confidence 99999988888554
No 453
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=60.62 E-value=5.8 Score=32.99 Aligned_cols=76 Identities=8% Similarity=-0.007 Sum_probs=50.0
Q ss_pred CCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhc--cCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 65 TDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSS--KKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~--~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
....++.++++..|+|+++++.-|.|..|- +.-+-..+++|++.+. ..++|++ | +.+..+..+...|..|
T Consensus 77 ~~l~~aa~~L~~~g~d~IviaCnta~~~~G---~~~~~~~~~~l~~~~~~~~~~iPv~-~----~~~A~~~al~~~g~~r 148 (273)
T 2xed_A 77 AQRERCVLEIADAAPEVILYACLVAVMVGG---PGEHHRVESAVAEQLATGGSQALVR-S----SAGALVEGLRALDAQR 148 (273)
T ss_dssp TTHHHHHHHHHTTCCSEEEECCHHHHHTTC---TTHHHHHHHHHHHHHHHTTCCCEEE-E----HHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhhcCCCEEEECCChHHHhcc---cchhHHHHHHHHHHhhccCCCCCEe-c----HHHHHHHHHHHcCCCe
Confidence 344667778888999999999999997663 2222334577777660 1137765 3 3456666666678888
Q ss_pred eecchH
Q 029526 143 FNVNTE 148 (192)
Q Consensus 143 INi~T~ 148 (192)
|=+-|.
T Consensus 149 vgvltp 154 (273)
T 2xed_A 149 VALVTP 154 (273)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 877543
No 454
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=60.50 E-value=72 Score=26.44 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=70.9
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHH---Hh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEE---FI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~---Fv 74 (192)
-++.|.+.+.+=||. |+.+|=.+..+.+++.+.. .+.|=+=.|. ++.+++.+ ++
T Consensus 32 li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-rvpviaGvg~-----------------~~t~~ai~la~~a 93 (292)
T 3daq_A 32 LLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK-RVPVIAGTGT-----------------NDTEKSIQASIQA 93 (292)
T ss_dssp HHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SCHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCcEEEeCCc-----------------ccHHHHHHHHHHH
Confidence 467889999887764 5689999999999998753 3555332111 12234433 46
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCC--CHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNL--KLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~l--d~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++.+.-= .|-. |.- =++-.++|.+.+ ++|++|. -|..++.+.+.+..+.
T Consensus 94 ~~~Gadavlv~~P----~y~~--~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 155 (292)
T 3daq_A 94 KALGADAIMLITP----YYNK--TNQRGLVKHFEAIADAV---KLPVVLYNVPSRTNMTIEPETVEILSQH 155 (292)
T ss_dssp HHHTCSEEEEECC----CSSC--CCHHHHHHHHHHHHHHH---CSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred HHcCCCEEEECCC----CCCC--CCHHHHHHHHHHHHHhC---CCCEEEEecccccCCCCCHHHHHHHhcC
Confidence 6789998877532 1321 211 122345666666 7999997 4788999999988764
No 455
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.41 E-value=14 Score=32.13 Aligned_cols=67 Identities=19% Similarity=0.328 Sum_probs=47.4
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV 145 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi 145 (192)
.+.+... .+.|+|++.+ ...|| .|..-++.++.|++.+. ++|+++. ...+.++.+++.+.|+.=|.+
T Consensus 155 ~~~a~~~-~~~G~d~i~i--~~~~g-----~~~~~~e~i~~ir~~~~--~~pviv~--~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 155 IERVEEL-VKAHVDILVI--DSAHG-----HSTRIIELIKKIKTKYP--NLDLIAG--NIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHH-HHTTCSEEEE--CCSCC-----SSHHHHHHHHHHHHHCT--TCEEEEE--EECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHH-HHCCCCEEEE--eCCCC-----ChHHHHHHHHHHHHHCC--CCeEEEc--CCCcHHHHHHHHhcCCCEEEE
Confidence 3445543 4679998876 33454 25555777888888763 5899883 345678999999999998877
No 456
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=60.29 E-value=12 Score=31.13 Aligned_cols=70 Identities=9% Similarity=-0.020 Sum_probs=45.1
Q ss_pred HHHHhhhhCCc---EEEEecCcCCCCCCCC-----CCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHH----HHHHHh
Q 029526 70 AEEFIDETDID---ALAVCIGNVHGKYPSS-----GPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAEL----IKGCIE 137 (192)
Q Consensus 70 a~~Fv~~TgvD---~LAvaiGt~HG~y~~~-----~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~----~~~~i~ 137 (192)
+.+.+++.|+| .+-+.++.-+- +.+ .|..-.+.++++++.+ ++|+.+=-..+++.++ .+.+.+
T Consensus 111 ~a~~~~~~g~d~~~~iein~~~P~~--~g~~~~g~~~~~~~~ii~~vr~~~---~~Pv~vK~~~~~~~~~~~~~a~~~~~ 185 (314)
T 2e6f_A 111 MVRRLAPVAQEKGVLLELNLSCPNV--PGKPQVAYDFEAMRTYLQQVSLAY---GLPFGVKMPPYFDIAHFDTAAAVLNE 185 (314)
T ss_dssp HHHHHHHHHHHHCCEEEEECCCCCS--TTCCCGGGSHHHHHHHHHHHHHHH---CSCEEEEECCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcCceEEEEcCCCCC--CCchhhcCCHHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 33445567899 99999874331 111 1222245667777766 6999887777788777 556678
Q ss_pred cC-CeEee
Q 029526 138 RG-VRKFN 144 (192)
Q Consensus 138 ~G-i~KIN 144 (192)
.| +.=|.
T Consensus 186 aG~~d~i~ 193 (314)
T 2e6f_A 186 FPLVKFVT 193 (314)
T ss_dssp CTTEEEEE
T ss_pred cCCceEEE
Confidence 89 76554
No 457
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=60.24 E-value=74 Score=27.61 Aligned_cols=61 Identities=18% Similarity=0.094 Sum_probs=44.4
Q ss_pred hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecchHH
Q 029526 74 IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNTEV 149 (192)
Q Consensus 74 v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T~l 149 (192)
+++-+++++- -+ -|.-|++-+++|++.+ ++|+++ |.|=.+.++++++++.| +.=||+.-..
T Consensus 227 l~~~~i~~iE---------qP--~~~~d~~~~~~l~~~~---~iPIa~-dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 288 (400)
T 3mwc_A 227 MDAAKCLFHE---------QP--LHYEALLDLKELGERI---ETPICL-DESLISSRVAEFVAKLGISNIWNIKIQR 288 (400)
T ss_dssp HGGGCCSCEE---------SC--SCTTCHHHHHHHHHHS---SSCEEE-STTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred HHhcCCCEEe---------CC--CChhhHHHHHHHHhhC---CCCEEE-eCCcCCHHHHHHHHhcCCCCEEEEcchh
Confidence 4556787774 11 2334889999999887 699887 67777889999999877 5667776433
No 458
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=60.17 E-value=33 Score=26.63 Aligned_cols=57 Identities=7% Similarity=0.081 Sum_probs=37.2
Q ss_pred hhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEE---ee--cCCCC----CHHHHHHHHhcCCeEee
Q 029526 74 IDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLV---LH--GASGL----SAELIKGCIERGVRKFN 144 (192)
Q Consensus 74 v~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLV---lH--GgSG~----~~e~~~~~i~~Gi~KIN 144 (192)
+++.|++++-+. .++.+++|++.+ ++|++ .+ .+.++ +.+++..+.+.|...|.
T Consensus 32 ~~~~Ga~~i~~~---------------~~~~i~~i~~~~---~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~ 93 (223)
T 1y0e_A 32 AYEGGAVGIRAN---------------TKEDILAIKETV---DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIA 93 (223)
T ss_dssp HHHHTCSEEEEE---------------SHHHHHHHHHHC---CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred HHHCCCeeeccC---------------CHHHHHHHHHhc---CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEE
Confidence 456688887431 245678888777 57874 11 13333 56788888888888887
Q ss_pred cchH
Q 029526 145 VNTE 148 (192)
Q Consensus 145 i~T~ 148 (192)
+++.
T Consensus 94 l~~~ 97 (223)
T 1y0e_A 94 LDAT 97 (223)
T ss_dssp EECS
T ss_pred Eeee
Confidence 7653
No 459
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=60.08 E-value=13 Score=29.65 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=43.8
Q ss_pred hcCCCEeEeeCCCC----CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 5 VLGFDSLMVDGSHL----PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 5 ~~GFtSVM~D~S~l----~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++.|+.|-+|.|-. .-..+-...+.++++||..|+.|=|| |.|+ ++-.+++.+.|||
T Consensus 172 ~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viae-----GVEt--------------~~~~~~l~~lG~~ 232 (259)
T 3s83_A 172 RLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAE-----GVEN--------------AEMAHALQSLGCD 232 (259)
T ss_dssp HSCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEEC-----CCCS--------------HHHHHHHHHHTCC
T ss_pred hCCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEE-----eCCC--------------HHHHHHHHhcCCC
Confidence 45678888887643 23456667899999999999999998 5543 2455678899999
Q ss_pred EE
Q 029526 81 AL 82 (192)
Q Consensus 81 ~L 82 (192)
..
T Consensus 233 ~~ 234 (259)
T 3s83_A 233 YG 234 (259)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 460
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=60.05 E-value=40 Score=23.73 Aligned_cols=68 Identities=18% Similarity=0.274 Sum_probs=49.4
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++++++.+.++....|++-+.+.- |.. -+++++.|++... .+|+++=.+.. ..+...++.+.|+.-
T Consensus 33 ~~~~~~a~~~l~~~~~dliild~~l---------~~~~g~~~~~~l~~~~~--~~pii~ls~~~-~~~~~~~~~~~g~~~ 100 (155)
T 1qkk_A 33 FASATEALAGLSADFAGIVISDIRM---------PGMDGLALFRKILALDP--DLPMILVTGHG-DIPMAVQAIQDGAYD 100 (155)
T ss_dssp ESCHHHHHHTCCTTCCSEEEEESCC---------SSSCHHHHHHHHHHHCT--TSCEEEEECGG-GHHHHHHHHHTTCCE
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCCC---------CCCCHHHHHHHHHhhCC--CCCEEEEECCC-ChHHHHHHHhcCCCe
Confidence 4678899999998899998887532 111 3678888887643 68988876654 356678888999754
Q ss_pred e
Q 029526 143 F 143 (192)
Q Consensus 143 I 143 (192)
+
T Consensus 101 ~ 101 (155)
T 1qkk_A 101 F 101 (155)
T ss_dssp E
T ss_pred E
Confidence 3
No 461
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=59.98 E-value=17 Score=30.95 Aligned_cols=67 Identities=10% Similarity=0.118 Sum_probs=42.6
Q ss_pred hhcCCCEeEeeCCC-CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEE
Q 029526 4 IVLGFDSLMVDGSH-LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDAL 82 (192)
Q Consensus 4 i~~GFtSVM~D~S~-l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~L 82 (192)
.+.|+++|.|=++. .|..-+.....++++.+++.|+.+- + .. .+.+++.+++ +.+.|+|.+
T Consensus 112 ~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~-----~--t~----------G~l~~e~l~~-L~~aGvd~v 173 (369)
T 1r30_A 112 KAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEAC-----M--TL----------GTLSESQAQR-LANAGLDYY 173 (369)
T ss_dssp HHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEE-----E--EC----------SSCCHHHHHH-HHHHCCCEE
T ss_pred HHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEE-----E--ec----------CCCCHHHHHH-HHHCCCCEE
Confidence 35789998885542 2332455666777888887776432 1 00 1235555555 567899999
Q ss_pred EEecCc
Q 029526 83 AVCIGN 88 (192)
Q Consensus 83 AvaiGt 88 (192)
.+++.+
T Consensus 174 ~i~les 179 (369)
T 1r30_A 174 NHNLDT 179 (369)
T ss_dssp ECCCBS
T ss_pred eecCcC
Confidence 999887
No 462
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=59.81 E-value=33 Score=27.70 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=52.9
Q ss_pred hhhcCCCEeEeeCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 3 AIVLGFDSLMVDGS--HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 3 ai~~GFtSVM~D~S--~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
|-++|.+.|-+ ++ ..+++..++.-+++.++| +||.+=-|--. ...+.+++++.+++++++-+
T Consensus 114 A~~lGa~~v~~-g~~~~~~~~~~~~~l~~l~~~a--~Gv~l~lE~~~-------------~~~~~~~~~~~~l~~~v~~~ 177 (296)
T 2g0w_A 114 ARLFGVKHINC-GLLEKIPEEQIIVALGELCDRA--EELIIGLEFMP-------------YSGVADLQAAWRVAEACGRD 177 (296)
T ss_dssp HHHHTCCEEEE-CCCSCCCHHHHHHHHHHHHHHH--TTSEEEEECCT-------------TSSSCSHHHHHHHHHHHTCT
T ss_pred HHHcCCCEEEE-cCCCCCCHHHHHHHHHHHHHHh--cCCEEEEEecC-------------CCCCCCHHHHHHHHHHhCCC
Confidence 44567776655 43 345677777778888888 67766555321 01358899999999999888
Q ss_pred EEEEecCcCCCCCC
Q 029526 81 ALAVCIGNVHGKYP 94 (192)
Q Consensus 81 ~LAvaiGt~HG~y~ 94 (192)
.+-+.+-+.|=...
T Consensus 178 ~vgl~~D~~H~~~~ 191 (296)
T 2g0w_A 178 NAQLICDTWHWARA 191 (296)
T ss_dssp TEEEEEEHHHHHHT
T ss_pred CeEEEEehhHhhcc
Confidence 88888888885443
No 463
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=59.68 E-value=24 Score=29.62 Aligned_cols=73 Identities=11% Similarity=0.241 Sum_probs=49.5
Q ss_pred CCHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCC------HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHH
Q 029526 65 TDVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLK------LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGC 135 (192)
Q Consensus 65 T~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld------~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~ 135 (192)
-+|++..+.++ +.|+.-+.+.-|. | |.+. .++++.|++.. ++++.++.|. +++|.+++.
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l~gGe-~-------p~~~~~~~~~~~l~~~ik~~~---~i~i~~s~g~-~~~e~l~~L 158 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDLTMGE-D-------PYYYEDPNRFVELVQIVKEEL---GLPIMISPGL-MDNATLLKA 158 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEEEECC-C-------HHHHHSTHHHHHHHHHHHHHH---CSCEEEECSS-CCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeCC-C-------CccccCHHHHHHHHHHHHhhc---CceEEEeCCC-CCHHHHHHH
Confidence 48888888776 4688877764332 2 3222 45566666554 5777666543 788999999
Q ss_pred HhcCCeEeecchHH
Q 029526 136 IERGVRKFNVNTEV 149 (192)
Q Consensus 136 i~~Gi~KINi~T~l 149 (192)
.+.|+..++++-+.
T Consensus 159 ~~aG~~~i~i~lEt 172 (350)
T 3t7v_A 159 REKGANFLALYQET 172 (350)
T ss_dssp HHTTEEEEECCCBC
T ss_pred HHcCCCEEEEeeec
Confidence 99999998876444
No 464
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=59.57 E-value=25 Score=29.35 Aligned_cols=72 Identities=15% Similarity=0.208 Sum_probs=51.0
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEeec-
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFNV- 145 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KINi- 145 (192)
.++.+|+++.|+|++.++.-|+|-. -+.++++.+ ++|++ |+.+.-++.+.+ .+..||=|
T Consensus 76 ~~~~~~L~~~g~d~IVIACNTas~~-----------~l~~lr~~~---~iPVi-----giiepa~~~A~~~~~~~rIgVL 136 (290)
T 2vvt_A 76 WEMADFLLKKRIKMLVIACNTATAV-----------ALEEIKAAL---PIPVV-----GVILPGARAAVKVTKNNKIGVI 136 (290)
T ss_dssp HHHHHHHHTTTCSEEEECCHHHHHH-----------HHHHHHHHC---SSCEE-----ESSHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCcchhHH-----------HHHHHHHhC---CCCEE-----cccHHHHHHHHHhcCCCEEEEE
Confidence 5677788888999999999999831 167788877 69965 445677777764 57778888
Q ss_pred chHHHH---HHHHHhc
Q 029526 146 NTEVRK---AYMDSLS 158 (192)
Q Consensus 146 ~T~l~~---a~~~~~~ 158 (192)
.|.-.. .|.+.++
T Consensus 137 aT~~T~~s~~y~~~l~ 152 (290)
T 2vvt_A 137 GTLGTIKSASYEIAIK 152 (290)
T ss_dssp ECHHHHHTTHHHHHHH
T ss_pred eCcHhhhhHHHHHHHH
Confidence 666432 3555554
No 465
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=59.47 E-value=58 Score=28.07 Aligned_cols=99 Identities=12% Similarity=0.102 Sum_probs=51.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCH----HHHHHHhhhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDV----NQAEEFIDET 77 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~p----eea~~Fv~~T 77 (192)
++++.|+|+|. |.... . ..+.+.+...|+..=.-.+.+..... ...++ +++.+++++-
T Consensus 127 ~~l~~GvTtv~-d~~~~--~------~~~~~a~~~~g~r~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 188 (472)
T 4dzh_A 127 EMLRGGTTCVN-ENYFF--A------DVQAAVYKQHGFRALVGAVIIDFPTA---------WASSDDEYFARAGELHDQW 188 (472)
T ss_dssp HHHHTTEEEEE-EECSC--H------HHHHHHHHHTTCEEEEEEEECSSCCS---------SCSSHHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEEE-EcccC--H------HHHHHHHHHhCCeEEEEecccCCCcc---------cccCHHHHHHHHHHHHHHh
Confidence 37889999986 54422 1 23556667777654333333321100 11122 3444555442
Q ss_pred -CCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC
Q 029526 78 -DIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 78 -gvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
+.+.+.+.++ .|+.|. ...+.|+++.+..++.++|+.+|-.
T Consensus 189 ~~~~~i~~~~~-~~~~~~-----~~~~~l~~~~~~A~~~g~~v~iH~~ 230 (472)
T 4dzh_A 189 RDDPLISTAFA-PHAPYT-----VNDANFERVRMLADQLDMPVHLHTH 230 (472)
T ss_dssp TTCSSEEEEEE-ECCTTT-----SCHHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCceEEEEe-cCCCCC-----CCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3344444432 355443 3456666666655545788888854
No 466
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.42 E-value=41 Score=23.29 Aligned_cols=67 Identities=18% Similarity=0.299 Sum_probs=47.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++.++|.+.++....|.+-+.+.- |.. -+++++.|++... .+|+++=.+.. +.+...++.+.|+.-
T Consensus 34 ~~~~~~a~~~l~~~~~dlvllD~~l---------~~~~g~~l~~~l~~~~~--~~~ii~ls~~~-~~~~~~~~~~~ga~~ 101 (137)
T 3cfy_A 34 VETGRDAIQFIERSKPQLIILDLKL---------PDMSGEDVLDWINQNDI--PTSVIIATAHG-SVDLAVNLIQKGAED 101 (137)
T ss_dssp ESSHHHHHHHHHHHCCSEEEECSBC---------SSSBHHHHHHHHHHTTC--CCEEEEEESSC-CHHHHHHHHHTTCSE
T ss_pred eCCHHHHHHHHHhcCCCEEEEecCC---------CCCCHHHHHHHHHhcCC--CCCEEEEEecC-cHHHHHHHHHCCccE
Confidence 4678899999999999988776421 222 2678888987642 58888876654 456678888888753
No 467
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=59.40 E-value=89 Score=27.15 Aligned_cols=141 Identities=11% Similarity=0.076 Sum_probs=75.6
Q ss_pred ChhhhcCCCEeEeeCCCC--------------------CHHHHHHHHHHHHHHHHhC-CCeEEEecc-ccccCCCCCccc
Q 029526 1 MEAIVLGFDSLMVDGSHL--------------------PFKDNISHTKYISFLAHSK-GMLVEAELG-RLSGTEDGLTVE 58 (192)
Q Consensus 1 ~~ai~~GFtSVM~D~S~l--------------------~~eeNi~~Tk~vv~~Ah~~-gv~VEaElG-~i~g~e~~~~~~ 58 (192)
++|.++||+-|-|=+.|= ++|.=.|...||++-.++. |-. =+| +|... +.....
T Consensus 179 ~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d---~vgvRlS~~-~~~~~~ 254 (400)
T 4gbu_A 179 KNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHE---KVGLRLSPY-GVFNSM 254 (400)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG---GEEEEECTT-CCTTTC
T ss_pred HHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCC---cEEEEeccc-cccCCC
Confidence 378999999999998763 5777788889999888752 100 011 12111 111000
Q ss_pred cccccCCC-HHHHHHH---hhh-----hCCcEEEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccCCccEEeecCCCCC
Q 029526 59 DYEAKLTD-VNQAEEF---IDE-----TDIDALAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKKGVLLVLHGASGLS 128 (192)
Q Consensus 59 ~~~~~~T~-peea~~F---v~~-----TgvD~LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~ 128 (192)
. ....+. .++.... ++. ..++.+-++-+.....+... .....-...+.|++.+ ++|++.=|+-..+
T Consensus 255 ~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~---~~pvi~~G~~~~~ 330 (400)
T 4gbu_A 255 S-GGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIW---KGPVIRAGNFALH 330 (400)
T ss_dssp C-GGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHC---CSCEEEESSCTTC
T ss_pred C-ccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHh---CCCEEEeCCCCCh
Confidence 0 000111 1222222 222 13455666555554433211 1111111234467777 6999999988777
Q ss_pred HHHHHHHHhcCCeEeecchHH
Q 029526 129 AELIKGCIERGVRKFNVNTEV 149 (192)
Q Consensus 129 ~e~~~~~i~~Gi~KINi~T~l 149 (192)
++.....++-++.=|=++..+
T Consensus 331 ~~~~~~~~~~~aDlV~~gR~~ 351 (400)
T 4gbu_A 331 PEVVREEVKDKRTLIGYGRFF 351 (400)
T ss_dssp HHHHHHHTTSTTEEEECCHHH
T ss_pred HHHHHHHHcCCCeEhHHHHHH
Confidence 776666666667667666654
No 468
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=59.32 E-value=7.2 Score=32.51 Aligned_cols=61 Identities=10% Similarity=0.229 Sum_probs=44.0
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeEeec-c
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRKFNV-N 146 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~KINi-~ 146 (192)
.++.+|+++.|+|++.++.-|+|-. +.+|++.+ ++|++ |+-+.-.+ ++..+..||=+ +
T Consensus 89 ~~~~~~L~~~Gad~IVIaCNTah~~------------l~~lr~~~---~iPvi-----giiea~~~-aa~~~~~rVgVLa 147 (268)
T 3s81_A 89 ERYLHMLEDAGAECIVIPCNTAHYW------------FDDLQNVA---KARMI-----SILDATLG-DIPPSARHVGLLA 147 (268)
T ss_dssp HHHHHHHHHTTCSEEECSCSGGGGG------------HHHHHHHC---SSEEE-----CHHHHHHH-TSCTTCCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCHHHH------------HHHHHHHC---CCCEE-----cccHHHHH-HHHhcCCcEEEEe
Confidence 4677889999999999999999841 56777777 69987 45444333 33377778866 6
Q ss_pred hHH
Q 029526 147 TEV 149 (192)
Q Consensus 147 T~l 149 (192)
|..
T Consensus 148 T~~ 150 (268)
T 3s81_A 148 TNA 150 (268)
T ss_dssp CHH
T ss_pred chH
Confidence 654
No 469
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=59.23 E-value=38 Score=22.81 Aligned_cols=68 Identities=18% Similarity=0.274 Sum_probs=46.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCC-HHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLK-LDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld-~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.++++++.+.++....|++-+.+.- |..+ +++++.|++......+|+++-.+++ ..+...++.+.|+.
T Consensus 37 ~~~~~~a~~~~~~~~~dlvl~D~~l---------~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~ 105 (129)
T 1p6q_A 37 AGDGEQGMKIMAQNPHHLVISDFNM---------PKMDGLGLLQAVRANPATKKAAFIILTAQG-DRALVQKAAALGAN 105 (129)
T ss_dssp CSSHHHHHHHHHTSCCSEEEECSSS---------CSSCHHHHHHHHTTCTTSTTCEEEECCSCC-CHHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHcCCCCEEEEeCCC---------CCCCHHHHHHHHhcCccccCCCEEEEeCCC-CHHHHHHHHHcCCC
Confidence 5678999999988889988765421 2222 6788888764212268988876654 34567778888864
No 470
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=59.17 E-value=39 Score=23.01 Aligned_cols=67 Identities=13% Similarity=0.031 Sum_probs=49.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++.+++.+.+++...|++-+.+.-- +.. -+++++.|++. . .+|+++-.+.. ..+...++.+.|+.-
T Consensus 40 ~~~~~~a~~~~~~~~~dlii~d~~~~--------~~~~g~~~~~~l~~~-~--~~~ii~ls~~~-~~~~~~~~~~~g~~~ 107 (140)
T 3cg0_A 40 FDNGEEAVRCAPDLRPDIALVDIMLC--------GALDGVETAARLAAG-C--NLPIIFITSSQ-DVETFQRAKRVNPFG 107 (140)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEESSCC--------SSSCHHHHHHHHHHH-S--CCCEEEEECCC-CHHHHHHHHTTCCSE
T ss_pred ECCHHHHHHHHHhCCCCEEEEecCCC--------CCCCHHHHHHHHHhC-C--CCCEEEEecCC-CHHHHHHHHhcCCCE
Confidence 46778999999999999988875321 011 36788999887 3 69999887665 456678888888653
No 471
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=58.92 E-value=37 Score=22.63 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=46.4
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.++++++.++++....|.+=+.+.- |.. -+++++.|++.. .+|+++-.++. ..+...++.+.|+.-
T Consensus 33 ~~~~~~a~~~~~~~~~dlvi~D~~l---------~~~~g~~~~~~l~~~~---~~~ii~~s~~~-~~~~~~~~~~~g~~~ 99 (123)
T 1xhf_A 33 ATDGAEMHQILSEYDINLVIMDINL---------PGKNGLLLARELREQA---NVALMFLTGRD-NEVDKILGLEIGADD 99 (123)
T ss_dssp ESSHHHHHHHHHHSCCSEEEECSSC---------SSSCHHHHHHHHHHHC---CCEEEEEESCC-SHHHHHHHHHHTCSE
T ss_pred eCCHHHHHHHHhcCCCCEEEEcCCC---------CCCCHHHHHHHHHhCC---CCcEEEEECCC-ChHHHHHHHhcCcce
Confidence 4677899999998889988776421 222 267888898762 68988876654 345667788888643
No 472
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=58.88 E-value=18 Score=30.02 Aligned_cols=59 Identities=29% Similarity=0.313 Sum_probs=44.4
Q ss_pred hcCCCEeEeeCCCC----CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 5 VLGFDSLMVDGSHL----PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 5 ~~GFtSVM~D~S~l----~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
++.|+-|=||.|-. .-..+-...+.++++||..|+.|=|| |.|. ++-.+++.+.|||
T Consensus 196 ~l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAE-----GVEt--------------~~q~~~l~~lG~d 256 (294)
T 2r6o_A 196 QLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAE-----GIET--------------AQQYAFLRDRGCE 256 (294)
T ss_dssp HSCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEEC-----CCCS--------------HHHHHHHHHTTCC
T ss_pred hCCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEe-----cCCc--------------HHHHHHHHHcCCC
Confidence 34677788887643 23456778899999999999999998 5553 3556778899999
Q ss_pred EE
Q 029526 81 AL 82 (192)
Q Consensus 81 ~L 82 (192)
.+
T Consensus 257 ~~ 258 (294)
T 2r6o_A 257 FG 258 (294)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 473
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=58.84 E-value=34 Score=27.11 Aligned_cols=145 Identities=13% Similarity=0.070 Sum_probs=74.3
Q ss_pred hhhcCCCEeEeeCCCC-CHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCC--ccccccccCCCHHHHHHHhhhhCC
Q 029526 3 AIVLGFDSLMVDGSHL-PFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGL--TVEDYEAKLTDVNQAEEFIDETDI 79 (192)
Q Consensus 3 ai~~GFtSVM~D~S~l-~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~--~~~~~~~~~T~peea~~Fv~~Tgv 79 (192)
+-++||+.|-+..... ++.+ ...+++.+.+.++|+.+-.=.+ .+..-+-. .....+......+.+.++.++-|+
T Consensus 26 ~~~~G~~~vEl~~~~~~~~~~--~~~~~~~~~l~~~gl~~~~~~~-~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~ 102 (290)
T 2qul_A 26 IAGLGFDLMEISLGEFHNLSD--AKKRELKAVADDLGLTVMCCIG-LKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGA 102 (290)
T ss_dssp HHHTTCSEEEEESTTGGGSCH--HHHHHHHHHHHHHTCEEEEEEE-ECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCCEEEEecCCccccch--hhHHHHHHHHHHcCCceEEecC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5578999999876542 1111 2346777888889999887222 11000000 000001122344566777778899
Q ss_pred cEEEEecCcCCCC--CCCC-CCCCCH----HHHHHHHhhhccCCccEEeecCC------CCCHHHHHHHHh-cC--CeEe
Q 029526 80 DALAVCIGNVHGK--YPSS-GPNLKL----DLLKDLHALSSKKGVLLVLHGAS------GLSAELIKGCIE-RG--VRKF 143 (192)
Q Consensus 80 D~LAvaiGt~HG~--y~~~-~p~ld~----~~L~~I~~~~~~~~iPLVlHGgS------G~~~e~~~~~i~-~G--i~KI 143 (192)
..+-+.+-+.+|. |... ...-.+ +.|+++.+...+.+|.|++|--. ..+.+++.+.++ .| -.++
T Consensus 103 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 182 (290)
T 2qul_A 103 PVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFADAVDSPACKV 182 (290)
T ss_dssp SEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHHHHCCTTEEE
T ss_pred CEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHHHcCCCCEEE
Confidence 9886543111243 3221 111122 22333333333347999999432 234555555543 23 4688
Q ss_pred ecchHHH
Q 029526 144 NVNTEVR 150 (192)
Q Consensus 144 Ni~T~l~ 150 (192)
+++|.-.
T Consensus 183 ~~D~~h~ 189 (290)
T 2qul_A 183 QLDTFHM 189 (290)
T ss_dssp EEEHHHH
T ss_pred EEEchhh
Confidence 8887543
No 474
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=58.79 E-value=22 Score=27.82 Aligned_cols=129 Identities=14% Similarity=0.057 Sum_probs=0.0
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEecccccc------CCCCCccccccccCCCHHHHHHHhh
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSG------TEDGLTVEDYEAKLTDVNQAEEFID 75 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g------~e~~~~~~~~~~~~T~peea~~Fv~ 75 (192)
.+-++||+.|-+.. |++.. .+++.+.+.++|+.+-+ +..-.+ ..-.......+......+.+.++.+
T Consensus 23 ~~~~~G~~~vEl~~---~~~~~---~~~~~~~l~~~gl~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~ 95 (260)
T 1k77_A 23 AARKAGFDAVEFLF---PYNYS---TLQIQKQLEQNHLTLAL-FNTAPGDINAGEWGLSALPGREHEAHADIDLALEYAL 95 (260)
T ss_dssp HHHHHTCSEEECSC---CTTSC---HHHHHHHHHHTTCEEEE-EECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEecC---CCCCC---HHHHHHHHHHcCCceEE-EecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHH
Q ss_pred hhCCcEEEEecCcCCCCCCCC-CCCCCHHHHHHHHhhhccCCccEEee--------cCCCCCHHHHHHHHh
Q 029526 76 ETDIDALAVCIGNVHGKYPSS-GPNLKLDLLKDLHALSSKKGVLLVLH--------GASGLSAELIKGCIE 137 (192)
Q Consensus 76 ~TgvD~LAvaiGt~HG~y~~~-~p~ld~~~L~~I~~~~~~~~iPLVlH--------GgSG~~~e~~~~~i~ 137 (192)
+-|+..+-+..|...+.+... .-..-.+.|+++.+...+.+|.|++| +....+.+++.+.++
T Consensus 96 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~l~~ 166 (260)
T 1k77_A 96 ALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVE 166 (260)
T ss_dssp HTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHHHHHHHHH
T ss_pred HcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHHHHHHHHH
No 475
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=58.74 E-value=9.6 Score=32.37 Aligned_cols=119 Identities=15% Similarity=0.198 Sum_probs=68.3
Q ss_pred ccCCCHHHHHHHhh--------------hhCCcEEEEecCcCCCCCCCCCCC----CCHHHHHHHHhhhccC--CccEEe
Q 029526 62 AKLTDVNQAEEFID--------------ETDIDALAVCIGNVHGKYPSSGPN----LKLDLLKDLHALSSKK--GVLLVL 121 (192)
Q Consensus 62 ~~~T~peea~~Fv~--------------~TgvD~LAvaiGt~HG~y~~~~p~----ld~~~L~~I~~~~~~~--~iPLVl 121 (192)
.+|.+|+...++++ +.|+|.+-+ ....|.+-+ |+ +=+..+++|-+.++.. ++|++.
T Consensus 176 ~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~iqi--~D~~~~~ls--p~~f~ef~~p~~~~i~~~i~~~~~~~~~ih 251 (353)
T 1j93_A 176 LAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQI--FDSWATELS--PVDFEEFSLPYLKQIVDSVKLTHPNLPLIL 251 (353)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE--ECGGGGGSC--HHHHHHHTHHHHHHHHHHHHHHSTTCCEEE
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE--eCcccccCC--HHHHHHHhHHHHHHHHHHHHHhCCCCCEEE
Confidence 46889997766654 479997554 343333221 21 2223334444444322 578754
Q ss_pred ecCCCCCHHHHHHHHhcCCeEeecchH--HHHHHHHHhcC-----CCCChHHHHHHHHHHHHHHHHHHHHHhCC
Q 029526 122 HGASGLSAELIKGCIERGVRKFNVNTE--VRKAYMDSLSR-----PKSDLIHLMASAKEAMKAVVAEKMRLFGS 188 (192)
Q Consensus 122 HGgSG~~~e~~~~~i~~Gi~KINi~T~--l~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~i~~~gs 188 (192)
|. -|.. ..+....+.|+.-++++.. +..+- +.+.. .+.|+. ++-...+.+++.+++.++.+|.
T Consensus 252 ~c-~g~~-~~l~~l~~~g~d~~~~d~~~d~~~~~-~~~g~~~~l~Gnldp~-~l~~~~e~i~~~v~~~l~~~~~ 321 (353)
T 1j93_A 252 YA-SGSG-GLLERLPLTGVDVVSLDWTVDMADGR-RRLGPNVAIQGNVDPG-VLFGSKEFITNRINDTVKKAGK 321 (353)
T ss_dssp EC-SSCT-TTGGGGGGGCCSEEECCTTSCHHHHH-HHTCSSSEEECCBCGG-GGGSCHHHHHHHHHHHHHHHCS
T ss_pred EC-CChH-HHHHHHHhcCCCEEEeCCCCCHHHHH-HHcCCCeEEEecCCHH-HHcCCHHHHHHHHHHHHHHhCC
Confidence 43 3332 3455667889999998754 33222 11221 234663 4445678999999999998875
No 476
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=58.69 E-value=29 Score=29.09 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=45.0
Q ss_pred HhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCC---CCCHHHHHHHHhcCCeEee
Q 029526 73 FIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGAS---GLSAELIKGCIERGVRKFN 144 (192)
Q Consensus 73 Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgS---G~~~e~~~~~i~~Gi~KIN 144 (192)
.+++-|+|-+.+. ...+ ...||.++++++-+..+ +.|+++|=.- --|.+-+...+++|+..|=
T Consensus 81 ~~~~~GadGvV~G------~Lt~-dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rIL 146 (256)
T 1twd_A 81 TVRELGFPGLVTG------VLDV-DGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARVL 146 (256)
T ss_dssp HHHHTTCSEEEEC------CBCT-TSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCEEEEe------eECC-CCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEE
Confidence 3557899966653 3444 36799999999988875 7899999773 3345566677777777664
No 477
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=58.05 E-value=45 Score=23.40 Aligned_cols=67 Identities=12% Similarity=0.208 Sum_probs=47.7
Q ss_pred cCCCHHHHHHHhhhhC-CcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-
Q 029526 63 KLTDVNQAEEFIDETD-IDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG- 139 (192)
Q Consensus 63 ~~T~peea~~Fv~~Tg-vD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G- 139 (192)
..+++++|.+.+++.. +|.+-+.+.- |.. -+++++.|++... .+|+++-.++. ..+...++.+.|
T Consensus 32 ~~~~~~~a~~~l~~~~~~dlvi~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~-~~~~~~~~~~~g~ 99 (151)
T 3kcn_A 32 TCESGPEALACIKKSDPFSVIMVDMRM---------PGMEGTEVIQKARLISP--NSVYLMLTGNQ-DLTTAMEAVNEGQ 99 (151)
T ss_dssp EESSHHHHHHHHHHSCCCSEEEEESCC---------SSSCHHHHHHHHHHHCS--SCEEEEEECGG-GHHHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHcCCCCCEEEEeCCC---------CCCcHHHHHHHHHhcCC--CcEEEEEECCC-CHHHHHHHHHcCC
Confidence 3578899999998876 5988887522 222 2788899987653 68888876544 456678888888
Q ss_pred Ce
Q 029526 140 VR 141 (192)
Q Consensus 140 i~ 141 (192)
+.
T Consensus 100 ~~ 101 (151)
T 3kcn_A 100 VF 101 (151)
T ss_dssp CS
T ss_pred ee
Confidence 53
No 478
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=58.00 E-value=27 Score=26.86 Aligned_cols=68 Identities=22% Similarity=0.300 Sum_probs=43.8
Q ss_pred CCHHHHHHHhh---hhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 65 TDVNQAEEFID---ETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 65 T~peea~~Fv~---~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.+++++.++++ +.|+|++.+.+++-++ .+.++++++... .++++-. | +-...++.+.+++.|..
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~~~~----------~~~i~~ir~~~~-~~~~ig~-~-~v~~~~~~~~a~~~Gad 85 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTVPDA----------DTVIKELSFLKE-KGAIIGA-G-TVTSVEQCRKAVESGAE 85 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTSTTH----------HHHHHHTHHHHH-TTCEEEE-E-SCCSHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChhH----------HHHHHHHHHHCC-CCcEEEe-c-ccCCHHHHHHHHHcCCC
Confidence 56777777765 4699999888764211 344777777652 1244332 1 33467789999999987
Q ss_pred Eeecc
Q 029526 142 KFNVN 146 (192)
Q Consensus 142 KINi~ 146 (192)
=| ++
T Consensus 86 ~i-v~ 89 (205)
T 1wa3_A 86 FI-VS 89 (205)
T ss_dssp EE-EC
T ss_pred EE-Ec
Confidence 77 53
No 479
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=57.87 E-value=37 Score=26.90 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCcEEEEecCcCCCCCC
Q 029526 24 ISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDIDALAVCIGNVHGKYP 94 (192)
Q Consensus 24 i~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~ 94 (192)
++.-+++.++|.++||.+=-|-- ......+|+++.+|+++++-+.+-+.+=+.|-.+.
T Consensus 122 ~~~l~~l~~~a~~~Gv~l~lE~~-------------~~~~~~~~~~~~~l~~~~~~~~vg~~~D~~h~~~~ 179 (286)
T 3dx5_A 122 VNRIRMICELFAQHNMYVLLETH-------------PNTLTDTLPSTLELLGEVDHPNLKINLDFLHIWES 179 (286)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC-------------TTSTTSSHHHHHHHHHHHCCTTEEEEEEHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCEEEEecC-------------CCcCcCCHHHHHHHHHhcCCCCeEEEeccccHhhc
Confidence 34445666677777765555520 01245789999999999988888888888885554
No 480
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=57.83 E-value=20 Score=30.66 Aligned_cols=74 Identities=16% Similarity=0.109 Sum_probs=45.5
Q ss_pred HHHHHhhhhCCcEEEEecCcCC-CCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCH---HHHHHHHhcCCe---
Q 029526 69 QAEEFIDETDIDALAVCIGNVH-GKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSA---ELIKGCIERGVR--- 141 (192)
Q Consensus 69 ea~~Fv~~TgvD~LAvaiGt~H-G~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~---e~~~~~i~~Gi~--- 141 (192)
.|++.+ +-|.|.|.|.....+ |...- .+.--.++++.|++.+ ++||++ +.||.|+ +-++++++.|..
T Consensus 79 ~A~~~v-~~GAdiIDIg~~StrP~~~~v-s~eee~~vV~~v~~~~---~vplsI-~DT~~~~~~~~V~eaal~aga~~k~ 152 (310)
T 2h9a_B 79 WAKKCV-EYGADIVALRLVSAHPDGQNR-SGAELAEVCKAVADAI---DVPLMI-IGCGVEEKDAEIFPVIGEALSGRNC 152 (310)
T ss_dssp HHHHHH-HTTCSEEEEECGGGCTTTTCC-CHHHHHHHHHHHHHHC---SSCEEE-ECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHH-HcCCcEEEEeCccCCCCCCCC-CHHHHHHHHHHHHHhC---CceEEE-ECCCCCCCCHHHHHHHHHhCCCCCC
Confidence 344545 789999999875432 22211 1222245777887776 699988 4454444 457778888875
Q ss_pred EeecchH
Q 029526 142 KFNVNTE 148 (192)
Q Consensus 142 KINi~T~ 148 (192)
=||=-|.
T Consensus 153 iINdvs~ 159 (310)
T 2h9a_B 153 LLSSATK 159 (310)
T ss_dssp EEEEECT
T ss_pred EEEECCC
Confidence 5664444
No 481
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=57.77 E-value=85 Score=26.43 Aligned_cols=108 Identities=14% Similarity=0.200 Sum_probs=70.0
Q ss_pred hhhcCCCEeEeeCCC-----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGSH-----LPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S~-----l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=||. |+.+|-.+..+.+++.+.. .+.|=+=.|. ++.+++. +++
T Consensus 52 li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~-----------------~st~~ai~la~~A 113 (315)
T 3si9_A 52 QITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGAGS-----------------NSTSEAVELAKHA 113 (315)
T ss_dssp HHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeCCC-----------------CCHHHHHHHHHHH
Confidence 467889998888775 5789999999999888763 3444331111 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCC--CHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHh
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNL--KLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIE 137 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~l--d~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~ 137 (192)
++.|+|.+.+.-= .|.. |.- =++-.++|.+.+ ++|++|. -|..++.+.+.+..+
T Consensus 114 ~~~Gadavlv~~P----~y~~--~~~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 114 EKAGADAVLVVTP----YYNR--PNQRGLYTHFSSIAKAI---SIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHTTCSEEEEECC----CSSC--CCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HhcCCCEEEECCC----CCCC--CCHHHHHHHHHHHHHcC---CCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 6789998877521 1321 311 122335566665 7999998 378899999999887
No 482
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=57.72 E-value=42 Score=22.91 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=46.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCe
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVR 141 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~ 141 (192)
.++.+++.+.++....|.+-+.+.- |.. -+++++.|++... .+|+++-.+.. ..+...++.+.|+.
T Consensus 33 ~~~~~~al~~~~~~~~dlvl~D~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~~-~~~~~~~~~~~ga~ 99 (132)
T 3crn_A 33 AATAGEGLAKIENEFFNLALFXIKL---------PDMEGTELLEKAHKLRP--GMKKIMVTGYA-SLENSVFSLNAGAD 99 (132)
T ss_dssp ESSHHHHHHHHHHSCCSEEEECSBC---------SSSBHHHHHHHHHHHCT--TSEEEEEESCC-CHHHHHHHHHTTCS
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCC---------CCCchHHHHHHHHhhCC--CCcEEEEeccc-cHHHHHHHHhccch
Confidence 4667899999988889988776422 222 2678888887542 58988877665 35567788888864
No 483
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=57.71 E-value=80 Score=26.08 Aligned_cols=111 Identities=16% Similarity=0.145 Sum_probs=70.4
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.++.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .+.|=+=.|. ++.+++. +..
T Consensus 30 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~-----------------~~t~~ai~la~~a 91 (289)
T 2yxg_A 30 LIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGAGS-----------------NCTEEAIELSVFA 91 (289)
T ss_dssp HHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCC-----------------CCHHHHHHHHHHH
Confidence 47889999999876 46889999999999988764 3555332222 1223333 346
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec-----CCCCCHHHHHHHH-hc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG-----ASGLSAELIKGCI-ER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG-----gSG~~~e~~~~~i-~~ 138 (192)
++.|+|++.+.-= .|....+.==++-.++|.+.+ ++|++|+= |..++.+.+.+.. +.
T Consensus 92 ~~~Gadavlv~~P----~y~~~s~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~~ 154 (289)
T 2yxg_A 92 EDVGADAVLSITP----YYNKPTQEGLRKHFGKVAESI---NLPIVLYNVPSRTAVNLEPKTVKLLAEEY 154 (289)
T ss_dssp HHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHHHC
T ss_pred HhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhc---CCCEEEEeCccccCcCCCHHHHHHHHHhC
Confidence 6789998877521 232101110122234566555 79999973 6778999999887 54
No 484
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=57.56 E-value=12 Score=30.53 Aligned_cols=64 Identities=17% Similarity=0.265 Sum_probs=46.6
Q ss_pred HHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEeec-
Q 029526 68 NQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFNV- 145 (192)
Q Consensus 68 eea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KINi- 145 (192)
.++.+|+++.|+|++.++..|.|-.. ++++++.+ ++|++ |+.+.-++.+.+ .+..||=+
T Consensus 52 ~~~~~~L~~~g~d~iviaCnTa~~~~-----------~~~lr~~~---~iPvi-----gi~e~~~~~A~~~~~~~rigVl 112 (254)
T 1b73_A 52 LECAGFLKDKGVDIIVVACNTASAYA-----------LERLKKEI---NVPVF-----GVIEPGVKEALKKSRNKKIGVI 112 (254)
T ss_dssp HHHHHHHHTTTCSEEEECCHHHHTTS-----------HHHHHHHS---SSCEE-----ESHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCchhhHHH-----------HHHHHHhC---CCCEE-----eeeHHHHHHHHHccCCCEEEEE
Confidence 56777888899999999999998321 56777777 69965 344566777765 37788888
Q ss_pred chHHH
Q 029526 146 NTEVR 150 (192)
Q Consensus 146 ~T~l~ 150 (192)
.|.-.
T Consensus 113 aT~~T 117 (254)
T 1b73_A 113 GTPAT 117 (254)
T ss_dssp ECHHH
T ss_pred EChHH
Confidence 66654
No 485
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=57.48 E-value=8.2 Score=31.92 Aligned_cols=64 Identities=9% Similarity=0.147 Sum_probs=46.7
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHh-cCCeEeec
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIE-RGVRKFNV 145 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~-~Gi~KINi 145 (192)
..++.+|+++.|+|++.++..|+|... +.++++.+ ++|++ |+.+.-++.+.+ .+..||=|
T Consensus 63 ~~~~~~~L~~~g~d~iviaCNTas~~~-----------l~~lr~~~---~iPvi-----gi~epa~~~A~~~~~~~rIgV 123 (273)
T 2oho_A 63 TWELVNFLLTQNVKMIVFACNTATAVA-----------WEEVKAAL---DIPVL-----GVVLPGASAAIKSTTKGQVGV 123 (273)
T ss_dssp HHHHHHHHHTTTCSEEEECCHHHHHHH-----------HHHHHHHC---SSCEE-----ESHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCchHhHHH-----------HHHHHHhC---CCCEE-----eccHHHHHHHHHhcCCCeEEE
Confidence 356777788889999999999998431 56777777 69965 344556777765 46788888
Q ss_pred -chHH
Q 029526 146 -NTEV 149 (192)
Q Consensus 146 -~T~l 149 (192)
+|..
T Consensus 124 laT~~ 128 (273)
T 2oho_A 124 IGTPM 128 (273)
T ss_dssp EECHH
T ss_pred EECch
Confidence 6654
No 486
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=57.44 E-value=43 Score=23.03 Aligned_cols=67 Identities=10% Similarity=0.200 Sum_probs=49.0
Q ss_pred CCCHHHHHHHhhh-hCCcEEEEecCcCCCCCCCCCC-CC-CHHHHHHHHh--hhccCCccEEeecCCCCCHHHHHHHHhc
Q 029526 64 LTDVNQAEEFIDE-TDIDALAVCIGNVHGKYPSSGP-NL-KLDLLKDLHA--LSSKKGVLLVLHGASGLSAELIKGCIER 138 (192)
Q Consensus 64 ~T~peea~~Fv~~-TgvD~LAvaiGt~HG~y~~~~p-~l-d~~~L~~I~~--~~~~~~iPLVlHGgSG~~~e~~~~~i~~ 138 (192)
.+++++|.+.+++ ...|.+-+-+. -| .. -+++++.|++ .. ..+|+++-.+.. ..+...++.+.
T Consensus 35 ~~~~~~a~~~l~~~~~~dlvi~D~~---------l~~~~~g~~~~~~l~~~~~~--~~~~ii~ls~~~-~~~~~~~~~~~ 102 (140)
T 3lua_A 35 VENLKKFYSIFKDLDSITLIIMDIA---------FPVEKEGLEVLSAIRNNSRT--ANTPVIIATKSD-NPGYRHAALKF 102 (140)
T ss_dssp ECSHHHHHTTTTTCCCCSEEEECSC---------SSSHHHHHHHHHHHHHSGGG--TTCCEEEEESCC-CHHHHHHHHHS
T ss_pred ECCHHHHHHHHhcCCCCcEEEEeCC---------CCCCCcHHHHHHHHHhCccc--CCCCEEEEeCCC-CHHHHHHHHHc
Confidence 5778999999999 89998887642 12 21 2778889988 43 269998887655 45668889999
Q ss_pred CCeE
Q 029526 139 GVRK 142 (192)
Q Consensus 139 Gi~K 142 (192)
|+.-
T Consensus 103 g~~~ 106 (140)
T 3lua_A 103 KVSD 106 (140)
T ss_dssp CCSE
T ss_pred CCCE
Confidence 9653
No 487
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=57.44 E-value=89 Score=26.53 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=70.3
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|=.+..+.+++.+.. .++|=+=.|. .+.+++. +++
T Consensus 64 li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg~-----------------~st~eai~la~~A 125 (332)
T 2r8w_A 64 LDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGIGA-----------------LRTDEAVALAKDA 125 (332)
T ss_dssp HHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEECC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCC-----------------CCHHHHHHHHHHH
Confidence 47789999998876 57889999999999988763 3555442221 1223333 446
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEee-----cCCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLH-----GASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlH-----GgSG~~~e~~~~~i~~ 138 (192)
++.|+|++-+.-= .|....+.==++-.++|.+.+ ++|++|. -|..++.+.+.+..+.
T Consensus 126 ~~~Gadavlv~~P----~Y~~~s~~~l~~~f~~VA~a~---~lPiilYn~P~~tg~~l~~e~~~~La~~ 187 (332)
T 2r8w_A 126 EAAGADALLLAPV----SYTPLTQEEAYHHFAAVAGAT---ALPLAIYNNPTTTRFTFSDELLVRLAYI 187 (332)
T ss_dssp HHHTCSEEEECCC----CSSCCCHHHHHHHHHHHHHHC---SSCEEEECCHHHHCCCCCHHHHHHHHTS
T ss_pred HhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhc---CCCEEEEeCccccCcCCCHHHHHHHHcC
Confidence 6789998876521 132101110122234566655 7999997 3677899999988754
No 488
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=57.17 E-value=24 Score=27.99 Aligned_cols=46 Identities=11% Similarity=0.237 Sum_probs=27.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhh
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALS 112 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~ 112 (192)
+++..+..+.+.+.|+|++=+=+ .-|.|.+. ....++.+++|++.+
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i--~Dg~fv~~-~~~~~~~~~~lr~~~ 63 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDI--MDGHFVPN-LTIGAPVIQSLRKHT 63 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEE--EBSSSSSC-BCBCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEE--ecCCcCcc-hhhCHHHHHHHHhhc
Confidence 55666667777778888764443 33444331 344567777777655
No 489
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=57.06 E-value=80 Score=26.79 Aligned_cols=108 Identities=12% Similarity=0.074 Sum_probs=65.3
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHh---hhhC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFI---DETD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv---~~Tg 78 (192)
++++.||+.+=+..+ .++.++..+.|.+.. -++.+=.+ .+ ..| ++++ .+|+ ++-+
T Consensus 158 ~~~~~G~~~iKik~~---~~~d~~~v~avr~a~--~~~~l~vD------an---------~~~-~~~~-~~~~~~l~~~~ 215 (375)
T 1r0m_A 158 RHVEQGYRRIKLKIK---PGWDVQPVRATREAF--PDIRLTVD------AN---------SAY-TLAD-AGRLRQLDEYD 215 (375)
T ss_dssp HHHHTTCSCEEEECB---TTBSHHHHHHHHHHC--TTSCEEEE------CT---------TCC-CGGG-HHHHHTTGGGC
T ss_pred HHHHhcccEEEEecC---hHHHHHHHHHHHHHc--CCCeEEEe------CC---------CCC-CHHH-HHHHHHHHhCC
Confidence 456778888877654 133444444443332 13222111 01 123 3455 6665 4457
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecc
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVN 146 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~ 146 (192)
++++= -+ -|.-|++-+++|++.+ ++|++.-+.- ...++++++++.| +.=||+.
T Consensus 216 i~~iE---------qP--~~~~d~~~~~~l~~~~---~ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 216 LTYIE---------QP--LAWDDLVDHAELARRI---RTPLCLDESV-ASASDARKALALGAGGVINLK 269 (375)
T ss_dssp CSCEE---------CC--SCTTCSHHHHHHHHHC---SSCEEESTTC-CSHHHHHHHHHHTSCSEEEEC
T ss_pred CcEEE---------CC--CCcccHHHHHHHHHhC---CCCEEecCcc-CCHHHHHHHHHhCCCCEEEEC
Confidence 77774 11 2445888999999887 6998876554 6778999999887 6667774
No 490
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=56.95 E-value=1e+02 Score=27.17 Aligned_cols=116 Identities=10% Similarity=0.111 Sum_probs=73.7
Q ss_pred hhhhcCCCEeEeeCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhh---hC
Q 029526 2 EAIVLGFDSLMVDGSHLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDE---TD 78 (192)
Q Consensus 2 ~ai~~GFtSVM~D~S~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~---Tg 78 (192)
++++.||+.+=+.... +.++.++..+.+.+..-. ++.+=.+ ...--++++|.+|+++ .+
T Consensus 211 ~~~~~Gf~~~KlKvG~-~~~~d~~~v~avR~a~G~-~~~l~vD----------------aN~~~~~~~A~~~~~~L~~~~ 272 (441)
T 4a35_A 211 QALKDGWTRFKVKVGA-DLQDDMRRCQIIRDMIGP-EKTLMMD----------------ANQRWDVPEAVEWMSKLAKFK 272 (441)
T ss_dssp HHHHTTCCEEEEECSS-CHHHHHHHHHHHHHHHCT-TSEEEEE----------------CTTCCCHHHHHHHHHHHGGGC
T ss_pred HHHHCCCCEEEEcCCC-CHHHHHHHHHHHHHHhCC-CCeEEEE----------------CCCCCCHHHHHHHHHhhcccC
Confidence 4567789888877644 677777766665544321 2221111 0112358899999765 45
Q ss_pred CcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcC-CeEeecch
Q 029526 79 IDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERG-VRKFNVNT 147 (192)
Q Consensus 79 vD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~G-i~KINi~T 147 (192)
+.++- -+ -|.-|++-+++|++.++..++|++. |-|=.+..+++++++.| +.=||+..
T Consensus 273 ~~~iE----------eP-~~~~d~~~~~~l~~~l~~~~iPIa~-gE~~~~~~~~~~~l~~~a~div~~d~ 330 (441)
T 4a35_A 273 PLWIE----------EP-TSPDDILGHATISKALVPLGIGIAT-GEQCHNRVIFKQLLQAKALQFLQIDS 330 (441)
T ss_dssp CSEEE----------CC-SCTTCHHHHHHHHHHHGGGTCEEEE-CTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred ccEEe----------CC-CCcccHHHHHHHHHhccCCCCCEEe-CCccccHHHHHHHHHcCCCCEEEECc
Confidence 66552 11 2445888899999872212699877 77888899999999876 66677753
No 491
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=56.95 E-value=13 Score=31.76 Aligned_cols=75 Identities=16% Similarity=0.136 Sum_probs=47.5
Q ss_pred CHHHHHHHhhhhCCcEEEEe---cCcCCCCCCCCCCCCCHH----HHHHHHhhhccCCccEEeecCCCCC-HHH----HH
Q 029526 66 DVNQAEEFIDETDIDALAVC---IGNVHGKYPSSGPNLKLD----LLKDLHALSSKKGVLLVLHGASGLS-AEL----IK 133 (192)
Q Consensus 66 ~peea~~Fv~~TgvD~LAva---iGt~HG~y~~~~p~ld~~----~L~~I~~~~~~~~iPLVlHGgSG~~-~e~----~~ 133 (192)
|+-.|+- +++.|+|+|.++ +++++| |+.. -.+.++ .++.|.+.+ ++|++.=+-+|-. .++ ++
T Consensus 38 D~~sA~l-~e~aG~dai~vs~~s~a~~~G-~pD~-~~vt~~em~~~~~~I~r~~---~~pviaD~d~Gyg~~~~v~~~v~ 111 (305)
T 3ih1_A 38 DAMAALV-ARNTGFLALYLSGAAYTASKG-LPDL-GIVTSTEVAERARDLVRAT---DLPVLVDIDTGFGGVLNVARTAV 111 (305)
T ss_dssp SHHHHHH-HHHTTCSCEEECHHHHHHHHT-CCSS-SCSCHHHHHHHHHHHHHHH---CCCEEEECTTCSSSHHHHHHHHH
T ss_pred CHHHHHH-HHHcCCCEEEECcHHHHHhCC-CCCC-CcCCHHHHHHHHHHHHHhc---CCCEEEECCCCCCCHHHHHHHHH
Confidence 4444544 778999999984 566776 5542 334433 335555555 6899987666532 333 45
Q ss_pred HHHhcCCeEeecc
Q 029526 134 GCIERGVRKFNVN 146 (192)
Q Consensus 134 ~~i~~Gi~KINi~ 146 (192)
+.++.|+.=||+-
T Consensus 112 ~l~~aGaagv~iE 124 (305)
T 3ih1_A 112 EMVEAKVAAVQIE 124 (305)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHhCCcEEEEC
Confidence 5678999888873
No 492
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=56.53 E-value=18 Score=30.27 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=41.4
Q ss_pred CCCHHHHHHHh---hhhCCcEEEEecCcCCCCCCCCCCCCC----------------HHHHHHHHhh-hccCCccEEeec
Q 029526 64 LTDVNQAEEFI---DETDIDALAVCIGNVHGKYPSSGPNLK----------------LDLLKDLHAL-SSKKGVLLVLHG 123 (192)
Q Consensus 64 ~T~peea~~Fv---~~TgvD~LAvaiGt~HG~y~~~~p~ld----------------~~~L~~I~~~-~~~~~iPLVlHG 123 (192)
|-+++...+++ .+.|+|+|-+.+=-+-=.+ .+|.+. |+.++++++. . ++|+||-|
T Consensus 30 dP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~a--DGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~---~~Pivlm~ 104 (271)
T 3nav_A 30 DPNPEQSLAIMQTLIDAGADALELGMPFSDPLA--DGPTIQGANLRALAAKTTPDICFELIAQIRARNP---ETPIGLLM 104 (271)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGG--CCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT---TSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC--CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC---CCCEEEEe
Confidence 44556665554 4579999987652111001 135555 5777778765 4 69999865
Q ss_pred CC------CCCHHHHHHHHhcCCeE
Q 029526 124 AS------GLSAELIKGCIERGVRK 142 (192)
Q Consensus 124 gS------G~~~e~~~~~i~~Gi~K 142 (192)
=. |+ +..+++|.+.|+.=
T Consensus 105 Y~n~v~~~g~-~~f~~~~~~aGvdG 128 (271)
T 3nav_A 105 YANLVYARGI-DDFYQRCQKAGVDS 128 (271)
T ss_dssp CHHHHHHTCH-HHHHHHHHHHTCCE
T ss_pred cCcHHHHHhH-HHHHHHHHHCCCCE
Confidence 21 21 34455555666554
No 493
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=56.40 E-value=5.8 Score=34.91 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=40.5
Q ss_pred cCCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCC
Q 029526 63 KLTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGL 127 (192)
Q Consensus 63 ~~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~ 127 (192)
..+++++++++++.-.+|.+.+-++.+=|.. ...+|.+.....++|+++||.|++
T Consensus 273 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit----------~~~~ia~~A~~~gi~~~~h~~s~i 327 (410)
T 3dip_A 273 NLAGTRRFHEMLCADAIDFVMLDLTWCGGLS----------EGRKIAALAETHARPLAPHXTGPV 327 (410)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTSSCHH----------HHHHHHHHHHHTTCCEEECSSCHH
T ss_pred CcCCHHHHHHHHHcCCCCeEeecccccCCHH----------HHHHHHHHHHHcCCEEeeeCccHH
Confidence 4689999999999989999999876664432 234455555445899999998443
No 494
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=56.13 E-value=85 Score=25.93 Aligned_cols=111 Identities=16% Similarity=0.235 Sum_probs=70.0
Q ss_pred hhhcCCCEeEeeCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHH---HHh
Q 029526 3 AIVLGFDSLMVDGS-----HLPFKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAE---EFI 74 (192)
Q Consensus 3 ai~~GFtSVM~D~S-----~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~---~Fv 74 (192)
.|+.|.+.+.+=|| .|+.+|-.+..+.+++.+.. .++|=+=.|. ++.+++. ++.
T Consensus 31 li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gvg~-----------------~~t~~ai~la~~a 92 (291)
T 3a5f_A 31 HIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK-RIPVIAGTGS-----------------NNTAASIAMSKWA 92 (291)
T ss_dssp HHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCC-----------------SSHHHHHHHHHHH
T ss_pred HHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCc-----------------ccHHHHHHHHHHH
Confidence 47889999998776 68899999999999988763 3554322221 1223333 345
Q ss_pred hhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeec-----CCCCCHHHHHHHHhc
Q 029526 75 DETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHG-----ASGLSAELIKGCIER 138 (192)
Q Consensus 75 ~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHG-----gSG~~~e~~~~~i~~ 138 (192)
++.|+|++-+.-= .|.. |. +-++++-.++..+..++|++|+= |..++.+.+.+..+.
T Consensus 93 ~~~Gadavlv~~P----~y~~--~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 154 (291)
T 3a5f_A 93 ESIGVDGLLVITP----YYNK--TT-QKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCED 154 (291)
T ss_dssp HHTTCSEEEEECC----CSSC--CC-HHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTS
T ss_pred HhcCCCEEEEcCC----CCCC--CC-HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC
Confidence 6789998877521 2321 21 22333333333333479999974 677899999998764
No 495
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=56.02 E-value=23 Score=30.54 Aligned_cols=59 Identities=27% Similarity=0.261 Sum_probs=45.8
Q ss_pred hcCCCEeEeeCCCCC----HHHHHHHHHHHHHHHHhCCCeEEEeccccccCCCCCccccccccCCCHHHHHHHhhhhCCc
Q 029526 5 VLGFDSLMVDGSHLP----FKDNISHTKYISFLAHSKGMLVEAELGRLSGTEDGLTVEDYEAKLTDVNQAEEFIDETDID 80 (192)
Q Consensus 5 ~~GFtSVM~D~S~l~----~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~peea~~Fv~~TgvD 80 (192)
+..++-|=||.|-.. -+.+-...+.++.+||..|+.|=|| |.|+ ++-.+++.+.|||
T Consensus 356 ~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~l~~~viae-----GVEt--------------~~~~~~l~~~g~~ 416 (430)
T 3pjx_A 356 RLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAE-----RVET--------------EGELSVIREMGLY 416 (430)
T ss_dssp HHCCSCEEECGGGTTTTTTCHHHHHHHHHHHHHHHTTTCCEEEC-----CCCC--------------HHHHHHHHHTTCS
T ss_pred hCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHCCCcEEEE-----ecCC--------------HHHHHHHHHcCCC
Confidence 456888999987653 3556677899999999999999998 5543 3556778899999
Q ss_pred EE
Q 029526 81 AL 82 (192)
Q Consensus 81 ~L 82 (192)
.+
T Consensus 417 ~~ 418 (430)
T 3pjx_A 417 GV 418 (430)
T ss_dssp EE
T ss_pred ee
Confidence 75
No 496
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=55.87 E-value=35 Score=29.53 Aligned_cols=52 Identities=17% Similarity=0.253 Sum_probs=34.2
Q ss_pred HHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecC
Q 029526 67 VNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGA 124 (192)
Q Consensus 67 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGg 124 (192)
.++..+++++.|++.+.+-.. |++ .+..+.+.|.++-+.....+.|+.+|--
T Consensus 134 ~~~~~~l~~~~G~~~ik~~~~-----~~~-~~~~~~~~l~~~~~~a~~~g~~v~~Hae 185 (461)
T 3sfw_A 134 LEELESVVNNEGITSLKVFMA-----YKN-VLMADDETLFKTLIRAKELGALVQVHAE 185 (461)
T ss_dssp HHHHHHHHHTSCCCEEEEESS-----STT-TTBCCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHhCCCCEEEEEEe-----cCC-CcccCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 456677776578888765443 332 2556677777666665555899999954
No 497
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=55.47 E-value=24 Score=24.42 Aligned_cols=65 Identities=18% Similarity=0.232 Sum_probs=44.8
Q ss_pred CCCHHHHHHHhhhhCCcEEEEecCcCCCCCCCCCCCC-CHHHHHHHHhhhccCCccEEeecCCCCCHHHHHHHHhcCCeE
Q 029526 64 LTDVNQAEEFIDETDIDALAVCIGNVHGKYPSSGPNL-KLDLLKDLHALSSKKGVLLVLHGASGLSAELIKGCIERGVRK 142 (192)
Q Consensus 64 ~T~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~~p~l-d~~~L~~I~~~~~~~~iPLVlHGgSG~~~e~~~~~i~~Gi~K 142 (192)
.+++++|.+.++...+|.+-+.+.- |.. -+++++.|++... ..|+++=.+. + +...++.+.|+.-
T Consensus 41 ~~~~~~al~~l~~~~~dlvi~d~~l---------~~~~g~~~~~~l~~~~~--~~~ii~~s~~--~-~~~~~~~~~g~~~ 106 (143)
T 2qv0_A 41 FDDGLDVLKFLQHNKVDAIFLDINI---------PSLDGVLLAQNISQFAH--KPFIVFITAW--K-EHAVEAFELEAFD 106 (143)
T ss_dssp ESCHHHHHHHHHHCCCSEEEECSSC---------SSSCHHHHHHHHTTSTT--CCEEEEEESC--C-TTHHHHHHTTCSE
T ss_pred eCCHHHHHHHHHhCCCCEEEEecCC---------CCCCHHHHHHHHHccCC--CceEEEEeCC--H-HHHHHHHhCCcce
Confidence 5778999999999889988877532 222 2677888887542 4667766554 3 3567788888653
No 498
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=55.41 E-value=24 Score=28.02 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhccCCccEEeecCCC-CC------HHHHHHHHhcCCeEeecch
Q 029526 102 LDLLKDLHALSSKKGVLLVLHGASG-LS------AELIKGCIERGVRKFNVNT 147 (192)
Q Consensus 102 ~~~L~~I~~~~~~~~iPLVlHGgSG-~~------~e~~~~~i~~Gi~KINi~T 147 (192)
++.+++|++.+ ++|+.+= .+ .| ++.++.+.+.|+.-|-+.+
T Consensus 69 ~~~i~~i~~~~---~~pv~~~--~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 69 FWIVKEFRRHS---STPIVLM--TYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHTTC---CCCEEEE--ECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHhhC---CCCEEEE--eccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 67778888776 5886653 33 34 6889999999999999986
No 499
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=55.35 E-value=15 Score=31.75 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=55.0
Q ss_pred CCHHHHHHHhhhhCCcEEEE---e--cC---------------cCCCCCCCCCCC---CCHHHHHHHHhhhccCCccEEe
Q 029526 65 TDVNQAEEFIDETDIDALAV---C--IG---------------NVHGKYPSSGPN---LKLDLLKDLHALSSKKGVLLVL 121 (192)
Q Consensus 65 T~peea~~Fv~~TgvD~LAv---a--iG---------------t~HG~y~~~~p~---ld~~~L~~I~~~~~~~~iPLVl 121 (192)
+++++..+.++..|.|.|.. . +| +..|.|.+ |. +.++.+.+|++.+.. ++|++-
T Consensus 204 ~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG--~ai~p~a~~~v~~i~~~~~~-~ipIIg 280 (345)
T 3oix_A 204 FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGG--DYVKPTALANVHAFYKRLNP-SIQIIG 280 (345)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEE--GGGHHHHHHHHHHHHTTSCT-TSEEEE
T ss_pred CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCC--ccccHHHHHHHHHHHHHcCC-CCcEEE
Confidence 57777777777776665432 1 11 22344543 33 346777888877621 499999
Q ss_pred ecCCCCCHHHHHHHHhcCCeEeecchHHH
Q 029526 122 HGASGLSAELIKGCIERGVRKFNVNTEVR 150 (192)
Q Consensus 122 HGgSG~~~e~~~~~i~~Gi~KINi~T~l~ 150 (192)
=||--.++ +..+++..|..=|-++|.+.
T Consensus 281 ~GGI~s~~-da~~~l~aGAd~V~igra~~ 308 (345)
T 3oix_A 281 TGGVXTGR-DAFEHILCGASMVQIGTALH 308 (345)
T ss_dssp ESSCCSHH-HHHHHHHHTCSEEEESHHHH
T ss_pred ECCCCChH-HHHHHHHhCCCEEEEChHHH
Confidence 99877664 57778889999999999954
No 500
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=55.31 E-value=12 Score=32.20 Aligned_cols=104 Identities=10% Similarity=0.113 Sum_probs=61.3
Q ss_pred EeEeeCCC-CCHHHHHHHHHHHHHHHHhCCCeEEEecccccc-----CCCCCccccccccCCCHHHHHHHhhhhCCcEEE
Q 029526 10 SLMVDGSH-LPFKDNISHTKYISFLAHSKGMLVEAELGRLSG-----TEDGLTVEDYEAKLTDVNQAEEFIDETDIDALA 83 (192)
Q Consensus 10 SVM~D~S~-l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~i~g-----~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LA 83 (192)
.+|+|+.. +++++ +.++.+...++|+.+|-=+-.+.+ ..-...... ....++|+++++++++..+|.+.
T Consensus 191 ~l~vDan~~~~~~~----a~~~~~~l~~~~i~iE~P~~~~~~~~~l~~~~~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ 265 (379)
T 2rdx_A 191 KAMADANQGWRVDN----AIRLARATRDLDYILEQPCRSYEECQQVRRVADQPMKL-DECVTGLHMAQRIVADRGAEICC 265 (379)
T ss_dssp EEEEECTTCSCHHH----HHHHHHHTTTSCCEEECCSSSHHHHHHHHTTCCSCEEE-CTTCCSHHHHHHHHHHTCCSEEE
T ss_pred EEEEECCCCCCHHH----HHHHHHHHHhCCeEEeCCcCCHHHHHHHHhhCCCCEEE-eCCcCCHHHHHHHHHcCCCCEEE
Confidence 58999853 45544 344555555678877732221100 000111111 22568999999999999999999
Q ss_pred EecCcCCCCCCCCCCCCCHHHHHHHHhhhccCCccEEeecCCCCC
Q 029526 84 VCIGNVHGKYPSSGPNLKLDLLKDLHALSSKKGVLLVLHGASGLS 128 (192)
Q Consensus 84 vaiGt~HG~y~~~~p~ld~~~L~~I~~~~~~~~iPLVlHGgSG~~ 128 (192)
+-++..=|.. ...+|.+..+..++|+++|+..+.+
T Consensus 266 ik~~~~GGit----------~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 266 LKISNLGGLS----------KARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp EETTTTTSHH----------HHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred EeccccCCHH----------HHHHHHHHHHHcCCeEEEeeccCcH
Confidence 9876553332 2344544444458999999654333
Done!