Your job contains 1 sequence.
>029531
MGLASVIYSGVQAPHKFDSLLLRFSPTSTSQVPKLTSLLHFCNSQAPTFYSVSHNRRGQY
SPLLACAKGTEQEDDLSTSEVGRSSSQSHENDNTSHSPTTVDDAERQIEGRESYTSSVKT
VAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQV
LYKPFSCLMIIM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029531
(192 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2177053 - symbol:PDE149 "PIGMENT DEFECTIVE 149... 375 1.3e-34 1
UNIPROTKB|Q74EV4 - symbol:GSU0855 "Membrane protein, TerC... 158 3.8e-11 1
TIGR_CMR|GSU_0855 - symbol:GSU_0855 "membrane protein, Te... 158 3.8e-11 1
UNIPROTKB|Q74CV1 - symbol:GSU1570 "Membrane protein, TerC... 148 5.2e-10 1
TIGR_CMR|GSU_1570 - symbol:GSU_1570 "membrane protein, Te... 148 5.2e-10 1
UNIPROTKB|Q8E9J8 - symbol:SO_4279 "Tellurium ion resistan... 129 1.2e-06 1
UNIPROTKB|Q8EG61 - symbol:SO_1747 "Tellurium ion resistan... 129 1.2e-06 1
TIGR_CMR|SO_1747 - symbol:SO_1747 "membrane protein, puta... 129 1.2e-06 1
TIGR_CMR|SO_4279 - symbol:SO_4279 "membrane protein, puta... 129 1.2e-06 1
UNIPROTKB|Q48NA4 - symbol:terC "Tellurium resistance prot... 125 4.8e-06 1
UNIPROTKB|Q888S3 - symbol:terC "Tellurium resistance prot... 125 4.8e-06 1
UNIPROTKB|Q3ZA17 - symbol:DET0184 "Membrane protein, TerC... 120 1.9e-05 1
TIGR_CMR|DET_0184 - symbol:DET_0184 "membrane protein, Te... 120 1.9e-05 1
UNIPROTKB|Q9KM43 - symbol:VCA0546 "Putative uncharacteriz... 108 0.00061 1
TIGR_CMR|VC_A0546 - symbol:VC_A0546 "conserved hypothetic... 108 0.00061 1
>TAIR|locus:2177053 [details] [associations]
symbol:PDE149 "PIGMENT DEFECTIVE 149" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0042793 "transcription from plastid
promoter" evidence=RCA] InterPro:IPR005496 InterPro:IPR022369
Pfam:PF03741 GO:GO:0016021 EMBL:CP002688 GO:GO:0010027
GO:GO:0009535 TIGRFAMs:TIGR03718 IPI:IPI00542279 RefSeq:NP_568257.1
UniGene:At.27965 UniGene:At.67911 PRIDE:F4JZG9
EnsemblPlants:AT5G12130.1 GeneID:831086 KEGG:ath:AT5G12130
OMA:ATEYITG Uniprot:F4JZG9
Length = 384
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 88/183 (48%), Positives = 114/183 (62%)
Query: 1 MGLASVIYSGVQAPHKFDSLLLR---FSPTSTSQVPKLTSLLHFCNSQAPTFYSVSHNRR 57
M LASVI+ G+ P K D + L F P ++ + N P+ S + NRR
Sbjct: 1 MSLASVIHHGILPPAKSDRIFLTIPVFPPDFRARGWTKSPFSLLIN---PSLASAA-NRR 56
Query: 58 GQYSPLLACAKGTEQEDDLSTSEVGRSSSQSHENDNTSHSPTTVDDAE-RQIEGRESYTS 116
+ P +AC++G +QED+ S ++ EN TS S ++VD + + E+Y +
Sbjct: 57 LSHLPPIACSRGIDQEDEEKESRE-LLPHKNDENATTSRSSSSVDSGGLKDYQQEETYKT 115
Query: 117 SVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPV 176
S KTVA CV TAVAFG+G+G EG KASEFFAGYILEQSLSVDNLFVFVL+FKYFKVP+
Sbjct: 116 SFKTVALCVGTAVAFGIGIGLKEGVGKASEFFAGYILEQSLSVDNLFVFVLVFKYFKVPL 175
Query: 177 MYQ 179
MYQ
Sbjct: 176 MYQ 178
>UNIPROTKB|Q74EV4 [details] [associations]
symbol:GSU0855 "Membrane protein, TerC family"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741
GO:GO:0016021 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000230189 TIGRFAMs:TIGR03718 KO:K05794
RefSeq:NP_951912.1 GeneID:2685429 KEGG:gsu:GSU0855 PATRIC:22024471
OMA:IRIFFHE ProtClustDB:CLSK828057
BioCyc:GSUL243231:GH27-872-MONOMER Uniprot:Q74EV4
Length = 311
Score = 158 (60.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 107 QIEGRESYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFV 166
+I+ RE+ T T+ + VS A++F + F G +KA EFF GY++EQSLSVDNLFVF+
Sbjct: 32 EIKFREALTW---TLVW-VSLALSFNAWIYFEMGPTKAMEFFTGYLIEQSLSVDNLFVFI 87
Query: 167 LIFKYFKVPVMYQ 179
+IF YF + ++Q
Sbjct: 88 MIFTYFHITKVHQ 100
>TIGR_CMR|GSU_0855 [details] [associations]
symbol:GSU_0855 "membrane protein, TerC family"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016021 "integral to membrane" evidence=ISS]
InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000230189
TIGRFAMs:TIGR03718 KO:K05794 RefSeq:NP_951912.1 GeneID:2685429
KEGG:gsu:GSU0855 PATRIC:22024471 OMA:IRIFFHE ProtClustDB:CLSK828057
BioCyc:GSUL243231:GH27-872-MONOMER Uniprot:Q74EV4
Length = 311
Score = 158 (60.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 107 QIEGRESYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFV 166
+I+ RE+ T T+ + VS A++F + F G +KA EFF GY++EQSLSVDNLFVF+
Sbjct: 32 EIKFREALTW---TLVW-VSLALSFNAWIYFEMGPTKAMEFFTGYLIEQSLSVDNLFVFI 87
Query: 167 LIFKYFKVPVMYQ 179
+IF YF + ++Q
Sbjct: 88 MIFTYFHITKVHQ 100
>UNIPROTKB|Q74CV1 [details] [associations]
symbol:GSU1570 "Membrane protein, TerC family"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741
GO:GO:0016021 EMBL:AE017180 GenomeReviews:AE017180_GR
TIGRFAMs:TIGR03718 KO:K05794 RefSeq:NP_952621.1 GeneID:2687096
KEGG:gsu:GSU1570 PATRIC:22025985 HOGENOM:HOG000230190 OMA:YFAVPPA
ProtClustDB:CLSK2306775 BioCyc:GSUL243231:GH27-1590-MONOMER
Uniprot:Q74CV1
Length = 314
Score = 148 (57.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 111 RESYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFK 170
R S+ ++ V A+AF +G+ F+ G KA EF GY++E+SLSVDNLFVF++IF
Sbjct: 31 RVSFKEALGWSILWVGLALAFNVGIYFVLGQQKALEFLTGYLIEKSLSVDNLFVFIMIFT 90
Query: 171 YFKV 174
F V
Sbjct: 91 VFGV 94
>TIGR_CMR|GSU_1570 [details] [associations]
symbol:GSU_1570 "membrane protein, TerC family"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016021 "integral to membrane" evidence=ISS]
InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021
EMBL:AE017180 GenomeReviews:AE017180_GR TIGRFAMs:TIGR03718
KO:K05794 RefSeq:NP_952621.1 GeneID:2687096 KEGG:gsu:GSU1570
PATRIC:22025985 HOGENOM:HOG000230190 OMA:YFAVPPA
ProtClustDB:CLSK2306775 BioCyc:GSUL243231:GH27-1590-MONOMER
Uniprot:Q74CV1
Length = 314
Score = 148 (57.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 111 RESYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFK 170
R S+ ++ V A+AF +G+ F+ G KA EF GY++E+SLSVDNLFVF++IF
Sbjct: 31 RVSFKEALGWSILWVGLALAFNVGIYFVLGQQKALEFLTGYLIEKSLSVDNLFVFIMIFT 90
Query: 171 YFKV 174
F V
Sbjct: 91 VFGV 94
>UNIPROTKB|Q8E9J8 [details] [associations]
symbol:SO_4279 "Tellurium ion resistance family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741
GO:GO:0016021 EMBL:AE014299 GenomeReviews:AE014299_GR
HOGENOM:HOG000230189 TIGRFAMs:TIGR03718 RefSeq:NP_719804.1
GeneID:1171884 KEGG:son:SO_4279 PATRIC:23528206 OMA:QDEETNI
ProtClustDB:CLSK906405 Uniprot:Q8E9J8
Length = 325
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 117 SVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPV 176
S+K AF + + FG + + +G++ E+ GY++E+SLS+DN+FV LIF +P
Sbjct: 46 SLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGYLIEKSLSMDNVFVIALIFSSLGIPR 105
Query: 177 MYQ 179
+YQ
Sbjct: 106 LYQ 108
>UNIPROTKB|Q8EG61 [details] [associations]
symbol:SO_1747 "Tellurium ion resistance family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741
GO:GO:0016021 EMBL:AE014299 GenomeReviews:AE014299_GR
HOGENOM:HOG000230189 TIGRFAMs:TIGR03718 KO:K05794
ProtClustDB:CLSK906405 RefSeq:NP_717357.1 GeneID:1169525
KEGG:son:SO_1747 PATRIC:23523119 OMA:FLIEKAM Uniprot:Q8EG61
Length = 325
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 117 SVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPV 176
S+K AF + + FG + + +G++ E+ GY++E+SLS+DN+FV LIF +P
Sbjct: 46 SLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGYLIEKSLSMDNVFVIALIFSSLGIPR 105
Query: 177 MYQ 179
+YQ
Sbjct: 106 LYQ 108
>TIGR_CMR|SO_1747 [details] [associations]
symbol:SO_1747 "membrane protein, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000230189
TIGRFAMs:TIGR03718 KO:K05794 ProtClustDB:CLSK906405
RefSeq:NP_717357.1 GeneID:1169525 KEGG:son:SO_1747 PATRIC:23523119
OMA:FLIEKAM Uniprot:Q8EG61
Length = 325
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 117 SVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPV 176
S+K AF + + FG + + +G++ E+ GY++E+SLS+DN+FV LIF +P
Sbjct: 46 SLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGYLIEKSLSMDNVFVIALIFSSLGIPR 105
Query: 177 MYQ 179
+YQ
Sbjct: 106 LYQ 108
>TIGR_CMR|SO_4279 [details] [associations]
symbol:SO_4279 "membrane protein, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000230189
TIGRFAMs:TIGR03718 RefSeq:NP_719804.1 GeneID:1171884
KEGG:son:SO_4279 PATRIC:23528206 OMA:QDEETNI ProtClustDB:CLSK906405
Uniprot:Q8E9J8
Length = 325
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 117 SVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPV 176
S+K AF + + FG + + +G++ E+ GY++E+SLS+DN+FV LIF +P
Sbjct: 46 SLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGYLIEKSLSMDNVFVIALIFSSLGIPR 105
Query: 177 MYQ 179
+YQ
Sbjct: 106 LYQ 108
>UNIPROTKB|Q48NA4 [details] [associations]
symbol:terC "Tellurium resistance protein TerC"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0046690 "response
to tellurium ion" evidence=ISS] InterPro:IPR005496
InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0861 HOGENOM:HOG000230189
TIGRFAMs:TIGR03718 GO:GO:0046690 KO:K05794 RefSeq:YP_273117.1
STRING:Q48NA4 GeneID:3560610 KEGG:psp:PSPPH_0836 PATRIC:19970745
OMA:FAGFLYV ProtClustDB:CLSK879822 Uniprot:Q48NA4
Length = 344
Score = 125 (49.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 123 FCVSTAVAFGLGVGFIE-GASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVP--VMYQ 179
F V+ ++AF G +++ G+ A+ F GY LE+ LSVDNLFVF+ +F +FK+P + ++
Sbjct: 48 FWVAISLAFA-GFLYVQHGSEVATLFVTGYALEKVLSVDNLFVFMALFSWFKIPDGLRHR 106
Query: 180 VLY 182
VLY
Sbjct: 107 VLY 109
>UNIPROTKB|Q888S3 [details] [associations]
symbol:terC "Tellurium resistance protein TerC"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0046690 "response
to tellurium ion" evidence=ISS] InterPro:IPR005496
InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021 EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG0861 HOGENOM:HOG000230189
TIGRFAMs:TIGR03718 GO:GO:0046690 KO:K05794 OMA:FAGFLYV
ProtClustDB:CLSK879822 RefSeq:NP_790782.1 GeneID:1182572
KEGG:pst:PSPTO_0943 PATRIC:19993089
BioCyc:PSYR223283:GJIX-958-MONOMER Uniprot:Q888S3
Length = 344
Score = 125 (49.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 123 FCVSTAVAFGLGVGFIE-GASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVP--VMYQ 179
F V+ ++AF G +++ G+ A+ F GY LE+ LSVDNLFVF+ +F +FK+P + ++
Sbjct: 48 FWVAISLAFA-GFLYVQHGSEVATLFVTGYALEKVLSVDNLFVFMALFSWFKIPDGLRHR 106
Query: 180 VLY 182
VLY
Sbjct: 107 VLY 109
>UNIPROTKB|Q3ZA17 [details] [associations]
symbol:DET0184 "Membrane protein, TerC family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741
GO:GO:0016021 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0861 HOGENOM:HOG000230189 OMA:FHWILYI TIGRFAMs:TIGR03718
KO:K05794 RefSeq:YP_180932.1 STRING:Q3ZA17 GeneID:3230537
KEGG:det:DET0184 PATRIC:21607445 ProtClustDB:CLSK837628
BioCyc:DETH243164:GJNF-184-MONOMER Uniprot:Q3ZA17
Length = 321
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 128 AVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQ 179
A+ FG + F G+ + +GYI+E SLSVDNLFVF++IF YF + YQ
Sbjct: 48 ALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVDNLFVFIMIFSYFCIKREYQ 99
>TIGR_CMR|DET_0184 [details] [associations]
symbol:DET_0184 "membrane protein, TerC family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0861
HOGENOM:HOG000230189 OMA:FHWILYI TIGRFAMs:TIGR03718 KO:K05794
RefSeq:YP_180932.1 STRING:Q3ZA17 GeneID:3230537 KEGG:det:DET0184
PATRIC:21607445 ProtClustDB:CLSK837628
BioCyc:DETH243164:GJNF-184-MONOMER Uniprot:Q3ZA17
Length = 321
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 128 AVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQ 179
A+ FG + F G+ + +GYI+E SLSVDNLFVF++IF YF + YQ
Sbjct: 48 ALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVDNLFVFIMIFSYFCIKREYQ 99
>UNIPROTKB|Q9KM43 [details] [associations]
symbol:VCA0546 "Putative uncharacterized protein VCA0546"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741
GO:GO:0016021 GenomeReviews:AE003853_GR TIGRFAMs:TIGR03718
KO:K05794 EMBL:AE004385 PIR:B82447 RefSeq:NP_232936.1 DNASU:2612884
GeneID:2612884 KEGG:vch:VCA0546 PATRIC:20085646 OMA:LYVLISE
ProtClustDB:CLSK869645 Uniprot:Q9KM43
Length = 318
Score = 108 (43.1 bits), Expect = 0.00061, P = 0.00061
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 141 ASKAS-EFFAGYILEQSLSVDNLFVFVLIFKYFKVP 175
A KA+ F GY+LE+SLSVDNLFVF +IF + VP
Sbjct: 67 AEKATLSFITGYLLEKSLSVDNLFVFAIIFHQYSVP 102
>TIGR_CMR|VC_A0546 [details] [associations]
symbol:VC_A0546 "conserved hypothetical protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005496 InterPro:IPR022369 Pfam:PF03741 GO:GO:0016021
GenomeReviews:AE003853_GR TIGRFAMs:TIGR03718 KO:K05794
EMBL:AE004385 PIR:B82447 RefSeq:NP_232936.1 DNASU:2612884
GeneID:2612884 KEGG:vch:VCA0546 PATRIC:20085646 OMA:LYVLISE
ProtClustDB:CLSK869645 Uniprot:Q9KM43
Length = 318
Score = 108 (43.1 bits), Expect = 0.00061, P = 0.00061
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 141 ASKAS-EFFAGYILEQSLSVDNLFVFVLIFKYFKVP 175
A KA+ F GY+LE+SLSVDNLFVF +IF + VP
Sbjct: 67 AEKATLSFITGYLLEKSLSVDNLFVFAIIFHQYSVP 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 192 192 0.00096 110 3 11 22 0.44 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 562 (60 KB)
Total size of DFA: 144 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.12u 0.08s 22.20t Elapsed: 00:00:02
Total cpu time: 22.12u 0.08s 22.20t Elapsed: 00:00:02
Start: Sat May 11 00:46:08 2013 End: Sat May 11 00:46:10 2013