Query 029532
Match_columns 192
No_of_seqs 189 out of 1734
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:50:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b6i_A Flavoprotein WRBA; flav 100.0 1.1E-29 3.8E-34 192.0 19.9 185 1-189 11-197 (198)
2 2a5l_A Trp repressor binding p 100.0 1.3E-29 4.6E-34 191.9 18.2 182 1-189 15-199 (200)
3 2zki_A 199AA long hypothetical 100.0 1.8E-28 6.2E-33 185.7 17.7 181 2-190 14-196 (199)
4 1ydg_A Trp repressor binding p 100.0 7.3E-29 2.5E-33 189.6 15.0 181 1-190 16-202 (211)
5 3d7n_A Flavodoxin, WRBA-like p 99.9 1.5E-26 5E-31 174.8 15.1 170 1-190 16-189 (193)
6 3fni_A Putative diflavin flavo 99.9 6.3E-26 2.2E-30 166.4 14.8 135 1-187 14-149 (159)
7 3hly_A Flavodoxin-like domain; 99.9 1.6E-25 5.4E-30 164.6 15.4 136 1-188 10-145 (161)
8 2ark_A Flavodoxin; FMN, struct 99.9 1.6E-24 5.4E-29 162.9 17.4 154 1-190 14-170 (188)
9 5nul_A Flavodoxin; electron tr 99.9 3.9E-24 1.3E-28 152.9 12.5 128 1-183 8-137 (138)
10 2q62_A ARSH; alpha/beta, flavo 99.9 3.9E-22 1.3E-26 155.8 17.0 166 2-190 47-213 (247)
11 1sqs_A Conserved hypothetical 99.9 1.2E-22 4E-27 158.4 10.8 156 2-187 14-179 (242)
12 2fzv_A Putative arsenical resi 99.9 1.4E-21 4.9E-26 154.5 16.6 167 2-190 71-238 (279)
13 2fz5_A Flavodoxin; alpha/beta 99.9 3.2E-22 1.1E-26 142.4 11.7 126 1-183 9-136 (137)
14 2vzf_A NADH-dependent FMN redu 99.9 1.7E-22 5.8E-27 152.9 8.1 162 2-188 15-178 (197)
15 3f6r_A Flavodoxin; FMN binding 99.9 1.4E-21 4.9E-26 141.2 12.2 133 1-184 11-147 (148)
16 1rtt_A Conserved hypothetical 99.9 1.3E-21 4.4E-26 147.4 12.3 166 2-188 19-185 (193)
17 3fvw_A Putative NAD(P)H-depend 99.9 5.1E-22 1.8E-26 149.8 9.8 166 2-189 15-186 (192)
18 2q9u_A A-type flavoprotein; fl 99.9 1.9E-21 6.5E-26 162.1 14.0 139 1-189 266-407 (414)
19 4dik_A Flavoprotein; TM0755, e 99.9 1E-21 3.4E-26 163.7 11.7 131 1-181 275-408 (410)
20 4hs4_A Chromate reductase; tri 99.9 2.7E-21 9.2E-26 146.6 11.8 166 2-191 19-190 (199)
21 3k1y_A Oxidoreductase; structu 99.9 1.7E-21 5.9E-26 146.6 10.5 158 2-187 24-188 (191)
22 2ohh_A Type A flavoprotein FPR 99.9 2E-21 6.9E-26 161.3 12.0 138 1-186 266-403 (404)
23 1f4p_A Flavodoxin; electron tr 99.8 8.7E-21 3E-25 136.8 9.8 132 1-183 10-145 (147)
24 3svl_A Protein YIEF; E. coli C 99.8 7.2E-21 2.5E-25 143.6 9.6 165 2-189 17-187 (193)
25 3u7r_A NADPH-dependent FMN red 99.8 1.4E-19 4.8E-24 136.0 16.2 162 2-188 15-181 (190)
26 3gfs_A FMN-dependent NADPH-azo 99.8 4.9E-21 1.7E-25 142.1 7.6 156 2-187 13-169 (174)
27 1ycg_A Nitric oxide reductase; 99.8 4E-20 1.4E-24 153.1 12.0 136 1-186 261-397 (398)
28 1rli_A Trp repressor binding p 99.8 7.5E-22 2.6E-26 147.3 1.0 155 2-183 16-183 (184)
29 1e5d_A Rubredoxin\:oxygen oxid 99.8 1.2E-19 4.1E-24 150.5 14.2 138 1-188 262-399 (402)
30 3s2y_A Chromate reductase; ura 99.7 2.2E-21 7.4E-26 147.1 0.0 167 2-190 19-189 (199)
31 2hpv_A FMN-dependent NADH-azor 99.8 3.2E-20 1.1E-24 141.3 5.3 159 2-183 16-206 (208)
32 1t0i_A YLR011WP; FMN binding p 99.8 9.7E-20 3.3E-24 136.8 7.7 123 2-132 13-149 (191)
33 1t5b_A Acyl carrier protein ph 99.8 1.3E-18 4.5E-23 131.2 11.5 131 2-133 15-171 (201)
34 1czn_A Flavodoxin; FMN binding 99.8 7.7E-18 2.6E-22 124.0 14.9 154 1-184 10-166 (169)
35 2amj_A Modulator of drug activ 99.8 1.9E-17 6.6E-22 125.8 15.4 116 2-133 29-176 (204)
36 1obo_A Flavodoxin; electron tr 99.8 3.5E-17 1.2E-21 120.5 15.7 154 1-185 11-167 (169)
37 3lcm_A SMU.1420, putative oxid 99.7 2.3E-17 7.9E-22 124.6 11.8 126 2-133 13-160 (196)
38 1ykg_A SIR-FP, sulfite reducta 99.7 2.3E-17 7.8E-22 121.5 11.4 136 1-187 19-155 (167)
39 1yob_A Flavodoxin 2, flavodoxi 99.7 5.7E-17 2E-21 120.7 12.9 154 1-184 10-174 (179)
40 3r6w_A FMN-dependent NADH-azor 99.7 1E-16 3.5E-21 122.3 13.5 132 2-133 15-181 (212)
41 1d4a_A DT-diaphorase, quinone 99.7 1.6E-17 5.4E-22 131.6 9.0 130 2-133 15-186 (273)
42 2fcr_A Flavodoxin; electron tr 99.7 1.4E-16 4.8E-21 117.9 12.9 154 1-184 9-170 (173)
43 1ag9_A Flavodoxin; electron tr 99.7 4.1E-16 1.4E-20 115.6 14.9 155 1-186 10-168 (175)
44 3p0r_A Azoreductase; structura 99.7 1.9E-17 6.3E-22 126.5 7.5 132 2-133 19-180 (211)
45 2wc1_A Flavodoxin; electron tr 99.7 8.2E-17 2.8E-21 120.1 10.6 156 1-186 11-177 (182)
46 2hna_A Protein MIOC, flavodoxi 99.7 8.3E-18 2.8E-22 121.3 3.3 131 1-185 11-146 (147)
47 3tem_A Ribosyldihydronicotinam 99.7 8.2E-17 2.8E-21 124.3 9.0 105 2-108 14-150 (228)
48 3f2v_A General stress protein 99.7 2.7E-16 9.1E-21 118.3 10.9 116 7-133 17-147 (192)
49 3u7i_A FMN-dependent NADH-azor 99.7 1.5E-15 5E-20 116.9 15.2 161 2-185 20-213 (223)
50 3klb_A Putative flavoprotein; 99.7 1.7E-15 5.8E-20 111.0 12.8 116 1-131 14-139 (162)
51 3rpe_A MDAB, modulator of drug 99.7 2.1E-15 7.2E-20 115.3 13.7 115 3-133 43-189 (218)
52 1bvy_F Protein (cytochrome P45 99.6 5.2E-16 1.8E-20 116.7 8.6 135 1-186 31-167 (191)
53 2bmv_A Flavodoxin; electron tr 99.6 6E-15 2.1E-19 108.0 10.6 148 1-183 11-161 (164)
54 3edo_A Flavoprotein, putative 99.6 4.3E-15 1.5E-19 107.6 7.0 117 1-131 13-137 (151)
55 4ici_A Putative flavoprotein; 99.6 1.5E-14 5.2E-19 106.8 10.0 114 1-131 23-148 (171)
56 4gi5_A Quinone reductase; prot 99.6 7.8E-15 2.7E-19 116.1 8.8 105 2-108 35-178 (280)
57 3ha2_A NADPH-quinone reductase 99.6 5.7E-14 2E-18 104.2 12.7 111 3-133 15-139 (177)
58 3l9w_A Glutathione-regulated p 99.4 3.2E-13 1.1E-17 112.6 10.0 145 8-187 253-410 (413)
59 3hr4_A Nitric oxide synthase, 99.4 2.3E-12 7.7E-17 98.4 11.2 110 1-134 50-160 (219)
60 2bpo_A CPR, P450R, NADPH-cytoc 99.3 6.2E-12 2.1E-16 110.9 12.1 139 1-187 59-200 (682)
61 2xod_A NRDI protein, NRDI; fla 99.2 2.1E-11 7.3E-16 84.5 6.2 109 1-183 8-118 (119)
62 3qe2_A CPR, P450R, NADPH--cyto 99.1 2.3E-10 7.7E-15 99.9 10.6 113 1-133 28-143 (618)
63 1tll_A Nitric-oxide synthase, 99.0 5.1E-09 1.8E-13 92.4 13.3 111 1-133 21-172 (688)
64 3n3a_C Protein NRDI; ribonucle 98.4 4.8E-07 1.7E-11 64.7 5.1 89 57-183 56-150 (153)
65 1rlj_A NRDI protein; flavoprot 98.3 1.1E-06 3.9E-11 62.2 5.9 88 57-184 41-130 (139)
66 2m1z_A LMO0427 protein; homolo 86.1 0.57 1.9E-05 31.1 3.0 69 4-104 17-85 (106)
67 2kyr_A Fructose-like phosphotr 84.0 1.1 3.6E-05 30.0 3.5 69 4-104 20-88 (111)
68 3nbm_A PTS system, lactose-spe 82.3 2 6.7E-05 28.4 4.3 70 3-104 17-86 (108)
69 2r48_A Phosphotransferase syst 78.9 1.5 5.2E-05 29.0 2.8 68 4-104 17-84 (106)
70 1t0b_A THUA-like protein; treh 77.7 10 0.00035 28.8 7.7 60 9-85 34-94 (252)
71 1e2b_A Enzyme IIB-cellobiose; 76.9 4.2 0.00014 26.6 4.6 45 5-70 16-60 (106)
72 3rht_A (gatase1)-like protein; 75.9 5.5 0.00019 30.6 5.7 59 8-85 18-76 (259)
73 1tvm_A PTS system, galactitol- 75.4 5.1 0.00017 26.5 4.8 46 3-70 33-80 (113)
74 2r4q_A Phosphotransferase syst 74.5 1.5 5.1E-05 29.0 1.8 68 4-104 17-84 (106)
75 4gud_A Imidazole glycerol phos 66.1 8.7 0.0003 27.9 4.7 34 3-65 13-46 (211)
76 3ups_A Iojap-like protein; PSI 65.7 8.9 0.0003 26.4 4.3 54 4-85 18-71 (136)
77 2id1_A Hypothetical protein; a 65.0 9.3 0.00032 26.1 4.3 53 5-85 3-55 (130)
78 3ju3_A Probable 2-oxoacid ferr 65.0 13 0.00044 24.6 5.0 63 2-80 21-85 (118)
79 2l2q_A PTS system, cellobiose- 62.4 5.7 0.00019 26.0 2.8 44 3-69 16-61 (109)
80 3l4e_A Uncharacterized peptida 62.2 7.2 0.00025 28.7 3.6 50 10-80 47-96 (206)
81 2pv7_A T-protein [includes: ch 61.8 25 0.00086 27.0 6.9 55 7-86 32-86 (298)
82 1qdl_B Protein (anthranilate s 60.1 30 0.001 24.7 6.7 37 12-69 17-56 (195)
83 2o5a_A BH1328 protein; BHR21, 59.6 8.9 0.00031 26.0 3.4 53 5-85 3-55 (125)
84 3g0o_A 3-hydroxyisobutyrate de 58.0 60 0.0021 24.8 9.5 105 8-134 18-127 (303)
85 2raf_A Putative dinucleotide-b 55.9 17 0.00058 26.4 4.7 49 8-86 30-78 (209)
86 4huj_A Uncharacterized protein 53.6 8.7 0.0003 28.2 2.8 69 7-86 33-102 (220)
87 2h78_A Hibadh, 3-hydroxyisobut 53.4 33 0.0011 26.2 6.2 105 8-134 14-122 (302)
88 3doj_A AT3G25530, dehydrogenas 51.9 71 0.0024 24.5 8.0 107 8-135 32-141 (310)
89 3czc_A RMPB; alpha/beta sandwi 49.7 11 0.00039 24.5 2.6 44 4-69 31-77 (110)
90 3mw8_A Uroporphyrinogen-III sy 49.5 14 0.00047 27.4 3.4 25 55-86 46-70 (240)
91 1w85_B Pyruvate dehydrogenase 48.7 39 0.0013 26.4 6.1 67 2-84 209-278 (324)
92 3pdu_A 3-hydroxyisobutyrate de 48.4 73 0.0025 24.0 7.5 105 9-135 13-121 (287)
93 2b0j_A 5,10-methenyltetrahydro 48.2 79 0.0027 24.9 7.3 31 54-86 136-167 (358)
94 4e21_A 6-phosphogluconate dehy 47.0 41 0.0014 26.8 6.0 105 8-135 33-141 (358)
95 3qha_A Putative oxidoreductase 45.8 97 0.0033 23.5 10.5 105 8-135 26-131 (296)
96 2iuf_A Catalase; oxidoreductas 45.7 19 0.00064 31.7 4.0 82 3-105 541-641 (688)
97 3soz_A ORF 245 protein, cytopl 44.3 21 0.00071 27.1 3.6 47 9-70 35-81 (248)
98 4e5v_A Putative THUA-like prot 43.0 1.1E+02 0.0038 23.4 7.9 64 6-86 19-84 (281)
99 2ozl_B PDHE1-B, pyruvate dehyd 42.2 67 0.0023 25.4 6.5 67 2-84 224-293 (341)
100 1umd_B E1-beta, 2-OXO acid deh 41.0 46 0.0016 26.0 5.3 67 2-84 210-279 (324)
101 3re1_A Uroporphyrinogen-III sy 40.9 25 0.00085 26.6 3.7 59 8-86 25-86 (269)
102 3pef_A 6-phosphogluconate dehy 40.7 1.1E+02 0.0039 22.9 8.0 106 8-135 12-121 (287)
103 2gk3_A Putative cytoplasmic pr 39.0 27 0.00093 26.3 3.6 43 10-67 43-85 (256)
104 3tri_A Pyrroline-5-carboxylate 37.2 15 0.00053 28.0 2.0 59 7-70 13-74 (280)
105 3q98_A Transcarbamylase; rossm 35.2 1.1E+02 0.0036 25.0 6.7 38 94-131 189-226 (399)
106 3mos_A Transketolase, TK; thia 35.1 1.2E+02 0.0041 26.1 7.3 67 2-84 506-576 (616)
107 4dll_A 2-hydroxy-3-oxopropiona 34.8 49 0.0017 25.6 4.6 107 8-135 42-150 (320)
108 3exr_A RMPD (hexulose-6-phosph 34.7 15 0.00051 27.2 1.5 35 55-89 183-220 (221)
109 3efe_A THIJ/PFPI family protei 34.6 20 0.00067 26.2 2.1 45 54-105 67-114 (212)
110 3idf_A USP-like protein; unive 34.2 68 0.0023 20.7 4.7 47 6-69 65-111 (138)
111 3m3p_A Glutamine amido transfe 34.2 30 0.001 26.1 3.1 37 14-69 22-59 (250)
112 1qv9_A F420-dependent methylen 33.8 48 0.0016 25.2 4.0 79 5-105 16-100 (283)
113 3dlo_A Universal stress protei 31.8 1.1E+02 0.0037 20.5 5.5 27 4-31 37-63 (155)
114 1fy2_A Aspartyl dipeptidase; s 31.6 37 0.0013 25.1 3.2 24 54-81 74-97 (229)
115 2p4q_A 6-phosphogluconate dehy 30.8 99 0.0034 25.8 6.0 108 8-134 21-134 (497)
116 3r75_A Anthranilate/para-amino 30.4 96 0.0033 27.0 6.0 15 56-70 483-498 (645)
117 4hcj_A THIJ/PFPI domain protei 29.7 34 0.0011 24.3 2.6 79 12-104 27-109 (177)
118 1oth_A Protein (ornithine tran 29.0 1.3E+02 0.0044 23.7 6.1 59 66-131 123-183 (321)
119 2bfd_B 2-oxoisovalerate dehydr 28.9 86 0.0029 24.7 5.1 67 2-84 227-297 (342)
120 2yfk_A Aspartate/ornithine car 28.7 1.4E+02 0.0046 24.6 6.3 38 94-131 186-223 (418)
121 2c92_A 6,7-dimethyl-8-ribityll 27.8 64 0.0022 22.7 3.7 27 5-32 32-59 (160)
122 1yb4_A Tartronic semialdehyde 27.7 1.9E+02 0.0065 21.5 8.9 103 8-133 14-120 (295)
123 3r6d_A NAD-dependent epimerase 27.6 1E+02 0.0036 21.7 5.1 94 3-107 12-111 (221)
124 3qsg_A NAD-binding phosphogluc 26.7 1.5E+02 0.005 22.8 6.0 59 8-71 35-95 (312)
125 3l6d_A Putative oxidoreductase 26.5 67 0.0023 24.6 4.0 106 8-135 20-127 (306)
126 3ew7_A LMO0794 protein; Q8Y8U8 26.2 1.1E+02 0.0039 21.3 5.0 97 2-106 6-105 (221)
127 1mjh_A Protein (ATP-binding do 26.2 81 0.0028 21.0 4.1 13 58-70 119-131 (162)
128 3en0_A Cyanophycinase; serine 25.6 53 0.0018 25.5 3.2 14 54-67 105-118 (291)
129 1wl8_A GMP synthase [glutamine 25.5 1.7E+02 0.0059 20.3 7.3 40 3-68 11-53 (189)
130 3e8x_A Putative NAD-dependent 25.3 1.4E+02 0.0048 21.3 5.5 69 2-71 27-96 (236)
131 3pfn_A NAD kinase; structural 25.0 28 0.00095 28.1 1.5 13 57-69 244-256 (365)
132 3cpt_A Mitogen-activated prote 24.9 39 0.0013 23.4 2.0 18 69-86 15-32 (143)
133 3s3t_A Nucleotide-binding prot 24.6 91 0.0031 20.2 4.0 13 58-70 107-119 (146)
134 3hgm_A Universal stress protei 24.6 95 0.0032 20.1 4.1 12 59-70 110-121 (147)
135 2efe_B Small GTP-binding prote 24.5 1.4E+02 0.0048 19.9 5.1 74 54-132 79-153 (181)
136 4adb_A Succinylornithine trans 24.4 2.2E+02 0.0077 21.9 6.9 69 60-133 128-223 (406)
137 2i0f_A 6,7-dimethyl-8-ribityll 24.0 1.3E+02 0.0046 20.9 4.8 27 5-32 27-53 (157)
138 4gdh_A DJ-1, uncharacterized p 23.8 42 0.0014 24.0 2.2 43 56-104 70-115 (194)
139 3k96_A Glycerol-3-phosphate de 23.8 1.2E+02 0.004 24.1 5.0 71 8-86 40-120 (356)
140 3dtt_A NADP oxidoreductase; st 23.5 27 0.00093 25.9 1.2 58 8-70 30-101 (245)
141 3fwz_A Inner membrane protein 23.5 27 0.00091 23.3 1.0 61 8-70 18-82 (140)
142 3a9s_A D-arabinose isomerase; 22.9 68 0.0023 27.7 3.6 56 59-129 84-139 (595)
143 2a9v_A GMP synthase; structura 22.8 68 0.0023 23.2 3.2 13 54-66 49-61 (212)
144 2pgd_A 6-phosphogluconate dehy 22.8 1.3E+02 0.0044 24.9 5.3 108 8-134 13-126 (482)
145 1o1y_A Conserved hypothetical 22.7 64 0.0022 23.9 3.1 14 55-68 53-67 (239)
146 2fu5_C RAS-related protein RAB 22.2 1.4E+02 0.0048 20.0 4.8 74 54-132 75-149 (183)
147 1tq8_A Hypothetical protein RV 22.1 1.4E+02 0.0048 20.1 4.7 13 58-70 118-130 (163)
148 2kdd_A Borealin; protein dimer 22.0 1.4E+02 0.0047 17.9 3.8 27 165-191 49-75 (76)
149 3er6_A Putative transcriptiona 21.9 39 0.0013 24.5 1.7 45 54-105 69-117 (209)
150 1eze_A Cholesteryl ester trans 21.8 55 0.0019 17.1 1.8 16 172-187 9-24 (38)
151 4gbj_A 6-phosphogluconate dehy 21.5 97 0.0033 23.7 4.0 105 11-136 19-124 (297)
152 3l21_A DHDPS, dihydrodipicolin 21.1 1.5E+02 0.0051 22.9 5.0 29 58-86 109-137 (304)
153 1pgj_A 6PGDH, 6-PGDH, 6-phosph 21.0 80 0.0027 26.1 3.7 72 8-85 12-89 (478)
154 3gt0_A Pyrroline-5-carboxylate 21.0 27 0.00094 25.8 0.7 68 8-86 13-84 (247)
155 2bcg_Y Protein YP2, GTP-bindin 21.0 1.5E+02 0.0052 20.4 4.8 48 53-104 74-121 (206)
156 4ezb_A Uncharacterized conserv 20.9 2.9E+02 0.0098 21.2 8.0 103 8-133 35-145 (317)
157 3kkl_A Probable chaperone prot 20.8 42 0.0014 25.2 1.7 42 57-105 96-140 (244)
158 3ggo_A Prephenate dehydrogenas 20.8 1.1E+02 0.0039 23.5 4.4 59 8-70 44-105 (314)
159 4ekn_B Aspartate carbamoyltran 20.8 1.4E+02 0.0047 23.3 4.7 60 67-131 119-182 (306)
160 3f5d_A Protein YDEA; unknow pr 20.7 65 0.0022 23.3 2.7 40 58-105 62-102 (206)
161 3ojo_A CAP5O; rossmann fold, c 20.7 99 0.0034 25.4 4.1 15 54-68 369-383 (431)
162 1ml4_A Aspartate transcarbamoy 20.5 1.1E+02 0.0036 24.0 4.1 61 66-131 122-185 (308)
163 3gra_A Transcriptional regulat 20.5 42 0.0014 24.1 1.6 40 57-104 69-109 (202)
164 3obb_A Probable 3-hydroxyisobu 20.4 2.1E+02 0.0074 21.8 5.8 107 12-136 18-124 (300)
165 3pdi_A Nitrogenase MOFE cofact 20.3 2E+02 0.0067 23.9 5.9 36 92-135 328-363 (483)
166 1z0s_A Probable inorganic poly 20.2 33 0.0011 26.5 1.0 13 57-69 170-182 (278)
167 1z0f_A RAB14, member RAS oncog 20.1 1.1E+02 0.0036 20.4 3.7 75 54-132 82-156 (179)
168 4gwg_A 6-phosphogluconate dehy 20.0 3.8E+02 0.013 22.2 9.8 109 8-135 15-129 (484)
No 1
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=99.97 E-value=1.1e-29 Score=192.05 Aligned_cols=185 Identities=50% Similarity=0.866 Sum_probs=142.9
Q ss_pred CCCHHHHHHHHHHHhccc-cCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASS-VEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~-~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k 79 (192)
++|||+++|+++++++++ . |++++++++.+..+...+.....|. +..+....+++.+||+||||||+||+++|++||
T Consensus 11 ~~g~t~~la~~i~~~l~~~~-g~~v~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~aD~ii~gsP~y~~~~~~~lk 88 (198)
T 3b6i_A 11 MYGHIETMARAVAEGASKVD-GAEVVVKRVPETMPPQLFEKAGGKT-QTAPVATPQELADYDAIIFGTPTRFGNMSGQMR 88 (198)
T ss_dssp SSSHHHHHHHHHHHHHHTST-TCEEEEEECCCCSCHHHHHHTTCCC-CCSCBCCGGGGGGCSEEEEEEEEETTEECHHHH
T ss_pred CCcHHHHHHHHHHHHHhhcC-CCEEEEEEccccCchhhhhhccccc-ccCchhhHHHHHHCCEEEEEeChhcCCchHHHH
Confidence 489999999999999986 4 8899999999875433322222222 111222368999999999999999999999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceec
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
.|||++...|....++||++++|+++||. ++...++..+...+..+||.+++.++.... ......+.++.+||...+.
T Consensus 89 ~~ld~~~~~~~~~~l~~K~~~~~~t~g~~-g~~~~~l~~l~~~l~~~g~~~v~~~~~~~~-~~~~~~~~g~~~~g~~~~~ 166 (198)
T 3b6i_A 89 TFLDQTGGLWASGALYGKLASVFSSTGTG-GGQEQTITSTWTTLAHHGMVIVPIGYAAQE-LFDVSQVRGGTPYGATTIA 166 (198)
T ss_dssp HHHTTCHHHHHHTTTTTCEEEEEEEESSS-TTHHHHHHHHHHHHHHTTCEECCCTTCSGG-GGCCSSCCCCBTTBCEEEC
T ss_pred HHHHHhhhhhhhcccCCCEEEEEEeCCCC-ccHHHHHHHHHHHHHHCCcEEECCCCCccc-ccccccccCCCCCCcceec
Confidence 99999976554456899999999999987 566778889999999999999987664210 0000113566788887776
Q ss_pred C-CCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029532 160 G-DGSRQPTELELEQAFHQGKHIAGIAKKLK 189 (192)
Q Consensus 160 ~-~~~~~p~~~~~~~~~~lg~~la~~~~~~~ 189 (192)
+ +++..|+++++++++++|++|++.+++++
T Consensus 167 ~~~~~~~~~~~~~~~a~~~g~~la~~~~~~~ 197 (198)
T 3b6i_A 167 GGDGSRQPSQEELSIARYQGEYVAGLAVKLN 197 (198)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 45568999999999999999999998875
No 2
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=99.97 E-value=1.3e-29 Score=191.89 Aligned_cols=182 Identities=41% Similarity=0.619 Sum_probs=134.9
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCC-CHHHhcccCCCCCCCC-CCCChhHhhhCCEEEEeccccCCCchHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETL-PEEVLGKMSAPPKSDV-PIITPNELAEADGFVFGFPTRFGMMAAQF 78 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~-~~~~~~~~~~~~~~~~-~~~~~~~l~~aD~ii~gsP~y~g~~~~~~ 78 (192)
++|||+++|+++++++++ .|++++++++.+.. +|..|.. |..++. |....+++.+||+||||||+||+++|++|
T Consensus 15 ~~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aD~ii~gsP~y~~~~~~~l 90 (200)
T 2a5l_A 15 RHGATAEMARQIARGVEQ-GGFEARVRTVPAVSTECEAVAP---DIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPL 90 (200)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEBCCCEEC----------------CCBCCHHHHHTCSEEEEEEECBTTBCCHHH
T ss_pred CCChHHHHHHHHHHHHhh-CCCEEEEEEhhhccchhhhhcc---ccccccCchhhHHHHHHCCEEEEEcChhccCccHHH
Confidence 479999999999999998 59999999998863 3332222 222332 33347899999999999999999999999
Q ss_pred HHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcccee
Q 029532 79 KAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
|+|||++...|....++||++++|+++||..++...++..+...|..+|+.+++..+..+.. .+.+..+.+|+...+
T Consensus 91 k~~ld~~~~~~~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 167 (200)
T 2a5l_A 91 KYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIPYSEPAL---LETRGGGTPYGASHF 167 (200)
T ss_dssp HHHHHTCHHHHHHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECCCCC---------------CTTSBCCB
T ss_pred HHHHHHHHHHhhccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCccc---cccccCCCCcceeee
Confidence 99999997655445689999999999999866766788899999999999999876541110 111234556666665
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029532 159 AG-DGSRQPTELELEQAFHQGKHIAGIAKKLK 189 (192)
Q Consensus 159 ~~-~~~~~p~~~~~~~~~~lg~~la~~~~~~~ 189 (192)
.+ +++..|+++++++++++|++|++.+++++
T Consensus 168 ~~~~~~~~p~~~~~~~a~~~g~~l~~~~~~~~ 199 (200)
T 2a5l_A 168 AGADGKRSLDEHELTLCRALGKRLAETAGKLG 199 (200)
T ss_dssp CCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 54 45567999999999999999999998875
No 3
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=99.96 E-value=1.8e-28 Score=185.67 Aligned_cols=181 Identities=43% Similarity=0.668 Sum_probs=137.2
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC-HHHhcccCCCCCCCC-CCCChhHhhhCCEEEEeccccCCCchHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP-EEVLGKMSAPPKSDV-PIITPNELAEADGFVFGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k 79 (192)
+|||+++|+.+++++++ .|++++++++.+..+ |..|. ..|+.+|. +....+++.+||+||||||+||+++|++||
T Consensus 14 ~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~~~~~~~~~--~~~~~~d~~~~~~~~~l~~aD~ii~gsP~y~~~~~~~lk 90 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEE-AGAEVKIRRVRETLPPEFQSR--IPFDKVKDIPEVTLDDMRWADGFAIGSPTRYGNMAGGLK 90 (199)
T ss_dssp SSHHHHHHHHHHHHHHH-HSCEEEEEECCCCSCGGGGTT--CCGGGSTTSCBCCHHHHHHCSEEEEEEECBTTBCCHHHH
T ss_pred ccHHHHHHHHHHHHHHh-CCCEEEEEehhHhCChhhhhc--cCCCcccccccccHHHHHhCCEEEEECCccccCccHHHH
Confidence 69999999999999988 589999999988622 22221 12233332 221368999999999999999999999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceec
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
+|||++..+|....++||++++|+++||..++...++..+...|..+||.+++.++.++. ... ....+.+|+...+.
T Consensus 91 ~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~ 167 (199)
T 2zki_A 91 TFLDTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVPIGYGIPE-LFQ--TTTGGGPYGATHLG 167 (199)
T ss_dssp HHHHTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECCCTTCSTH-HHH--CSSSCCSSCCCCBS
T ss_pred HHHHHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeCCCcCCcc-ccc--cccCCCCcceeeec
Confidence 999999766655578999999999999976566677889999999999999987654210 000 01345566664432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029532 160 GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 160 ~~~~~~p~~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
+. ..|+++++++++++|++|++.+++++.
T Consensus 168 ~~--~~~~~~~~~~a~~~g~~l~~~~~~l~~ 196 (199)
T 2zki_A 168 SK--EELDEMERKIARFQGKRITEVAKAIKC 196 (199)
T ss_dssp SC--SSCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CC--CCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11 168999999999999999999988764
No 4
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=99.96 E-value=7.3e-29 Score=189.65 Aligned_cols=181 Identities=35% Similarity=0.507 Sum_probs=138.7
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCC-HHHhcccCCCCC-----CCCCCCChhHhhhCCEEEEeccccCCCc
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP-EEVLGKMSAPPK-----SDVPIITPNELAEADGFVFGFPTRFGMM 74 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~l~~aD~ii~gsP~y~g~~ 74 (192)
++|||+++|+.+++++++ .|++|+++++.+..+ |..|. ..+|.. +|++....+++.+||+||||||+||+++
T Consensus 16 ~~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~l~~aD~ii~gsP~y~~~~ 93 (211)
T 1ydg_A 16 STGTGYAMAQEAAEAGRA-AGAEVRLLKVRETAPQDVIDG-QDAWKANIEAMKDVPEATPADLEWAEAIVFSSPTRFGGA 93 (211)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEECCCCSCHHHHTT-CHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEEEEETTEE
T ss_pred CCChHHHHHHHHHHHHhc-CCCEEEEEeccccccchhhhc-ccccccccccccchhHHHHHHHHHCCEEEEEcCccccCc
Confidence 379999999999999998 699999999988733 22221 111110 1333335789999999999999999999
Q ss_pred hHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCc
Q 029532 75 AAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYG 154 (192)
Q Consensus 75 ~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g 154 (192)
|++||.|||++...|....++||++++|+++||..++...++..+...+..+||.+++.++.+.. + ..++++.||
T Consensus 94 ~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~~~~~~~~----~-~~~~~~~~g 168 (211)
T 1ydg_A 94 TSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTPPGYTDEV----I-FKSGGNPYG 168 (211)
T ss_dssp CHHHHHHHHTTHHHHHTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECCCTTCSHH----H-HHTTCCSSS
T ss_pred cHHHHHHHHHhccccccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeCCCCCChh----h-ccCCCCCcc
Confidence 99999999999766555578999999999999987666678889999999999999987653100 0 013355677
Q ss_pred cceecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029532 155 AGTFAGDGSRQPTELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
...+.+. ..|+++++++++++|++|++.+++++.
T Consensus 169 ~~~~~~~--~~p~~~~~~~a~~~g~~l~~~~~~~~~ 202 (211)
T 1ydg_A 169 ASVTANG--QPLLENDRASIRHQVRRQVELTAKLLE 202 (211)
T ss_dssp CEEECCS--SCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeecCC--CCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6554311 468999999999999999999988763
No 5
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=99.94 E-value=1.5e-26 Score=174.80 Aligned_cols=170 Identities=25% Similarity=0.320 Sum_probs=122.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|++|++++++ .+ +++.+. +++++...+++.+||+||||||+|++++|++||.
T Consensus 16 ~~GnT~~lA~~ia~~l~~-~~-----~~v~~~--------------~~~~~~~~~~l~~~D~ii~gsP~y~g~~~~~~k~ 75 (193)
T 3d7n_A 16 GYGHTHRMAEAVAEGAEA-TL-----HAIDAE--------------GNLSEDGWAALDAADAIIFGTPTYMGGPSWQFKK 75 (193)
T ss_dssp SSSHHHHHHHHHHHHHTC-EE-----EECCTT--------------SCCCHHHHHHHHHCSEEEEEEEEETTEECHHHHH
T ss_pred CChHHHHHHHHHHHHhhh-cc-----eEeeec--------------CCCCHhHHHHHHHCCEEEEEeCccCCCccHHHHH
Confidence 479999999999999975 23 344331 0111112478999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCc--cccccccCCCCCcccee
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGM--FEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 158 (192)
|||++...|....++||++++|+++|+.+++.+.++..+...|..+||.+++..+.++... ..-.....|++||..++
T Consensus 76 fld~~~~~~~~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~vg~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 155 (193)
T 3d7n_A 76 FADASSKPWFSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWVSLGIKPSNLKSSVRNDANRMGSYIAPMAQ 155 (193)
T ss_dssp HHHHTHHHHHTTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEECCCC-------------------CCSCEEE
T ss_pred HHHHhhhhccccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEeCCccCcccccccccccCCCCCCcceeeEE
Confidence 9999976665567899999999999887666778899999999999999998766542210 00001134556787666
Q ss_pred cC-CC-CCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029532 159 AG-DG-SRQPTELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 159 ~~-~~-~~~p~~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
.+ ++ +..||++++++|+++|++|++.+++++.
T Consensus 156 ~~~~~~~~~~d~~~l~~a~~~G~~la~~~~~l~~ 189 (193)
T 3d7n_A 156 SDADAAPEEMSVGDLETARLYGARVANVARQHKS 189 (193)
T ss_dssp C-------CCCHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 53 33 2238999999999999999999988763
No 6
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=99.94 E-value=6.3e-26 Score=166.40 Aligned_cols=135 Identities=16% Similarity=0.244 Sum_probs=113.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCC-CCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPET-LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k 79 (192)
++|||++||+.|++++.+ .|++++++++.+. ++.+. ..++.++|+||||||+|+|.+| ++
T Consensus 14 ~~GnT~~iA~~ia~~l~~-~g~~v~~~~~~~~~~~~~~----------------~~~~~~~d~ii~Gspty~g~~p--~~ 74 (159)
T 3fni_A 14 EYGYSDRLAQAIINGITK-TGVGVDVVDLGAAVDLQEL----------------RELVGRCTGLVIGMSPAASAAS--IQ 74 (159)
T ss_dssp TSTTHHHHHHHHHHHHHH-TTCEEEEEESSSCCCHHHH----------------HHHHHTEEEEEEECCBTTSHHH--HH
T ss_pred CChHHHHHHHHHHHHHHH-CCCeEEEEECcCcCCHHHH----------------HHHHHhCCEEEEEcCcCCCCcc--HH
Confidence 689999999999999988 6999999999875 44333 3678889999999999998866 59
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceec
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
.|++++. ...++||++++|+++||.+++ +..|...|...|+.+++.++.+
T Consensus 75 ~~l~~l~----~~~~~~k~va~fgs~g~~~~a----~~~l~~~l~~~G~~~v~~~~~~---------------------- 124 (159)
T 3fni_A 75 GALSTIL----GSVNEKQAVGIFETGGGDDEP----IDPLLSKFRNLGLTTAFPAIRI---------------------- 124 (159)
T ss_dssp HHHHHHH----HHCCTTSEEEEECCSSSCBCC----HHHHHHHHHHTTCEESSSCBCC----------------------
T ss_pred HHHHHHH----hhcccCCEEEEEEcCCCCcHH----HHHHHHHHHHCCCEEecCceEE----------------------
Confidence 9999985 235799999999999997544 3478888999999999866532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 160 GDGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 160 ~~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
+..|+++++++|+++|++|++.+++
T Consensus 125 ---~~~P~~~dl~~~~~~g~~la~~~~~ 149 (159)
T 3fni_A 125 ---KQTPTENTYKLCEEAGTDLGQWVTR 149 (159)
T ss_dssp ---SSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---EeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999999999999998764
No 7
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=99.94 E-value=1.6e-25 Score=164.60 Aligned_cols=136 Identities=21% Similarity=0.273 Sum_probs=112.3
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|+.|++++.+ .|++++++++.+.++.+. ..++.++|+||||||||++.+| . +.
T Consensus 10 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~~~~~d~ii~Gspty~g~~p-~-~~ 70 (161)
T 3hly_A 10 DYGYSDRLSQAIGRGLVK-TGVAVEMVDLRAVDPQEL----------------IEAVSSARGIVLGTPPSQPSEA-V-AT 70 (161)
T ss_dssp TSTTHHHHHHHHHHHHHH-TTCCEEEEETTTCCHHHH----------------HHHHHHCSEEEEECCBSSCCHH-H-HH
T ss_pred CChHHHHHHHHHHHHHHh-CCCeEEEEECCCCCHHHH----------------HHHHHhCCEEEEEcCCcCCchh-H-HH
Confidence 689999999999999988 699999999987543322 3678899999999999998765 4 99
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceecC
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|++++. ...++||++++|+++||.++ ++..+...|...|+.+++.++.+
T Consensus 71 fl~~l~----~~~l~gk~v~~fgs~g~~g~----a~~~l~~~l~~~G~~~v~~~~~~----------------------- 119 (161)
T 3hly_A 71 ALSTIF----AAAHNKQAIGLFDSYGGDDE----PIDALLAQFRNLGLHTAFPPIRV----------------------- 119 (161)
T ss_dssp HHHHHH----HHCCTTSEEEEECCCCSSBC----CHHHHHHHHHHTTCEESSSCBCC-----------------------
T ss_pred HHHHHH----hhhhCCCEEEEEEcCCCCcH----HHHHHHHHHHHCCCEEecCceEE-----------------------
Confidence 999985 23589999999999999643 34578888999999999765532
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAKKL 188 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~~~ 188 (192)
+..|+++++++|+++|++|++.+++.
T Consensus 120 --~~~P~~~dl~~~~~~g~~la~~l~~~ 145 (161)
T 3hly_A 120 --KDQPTEAIYQQCEESGTDLGQWLTRA 145 (161)
T ss_dssp --CSSCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred --eeCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 35799999999999999999988653
No 8
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=99.93 E-value=1.6e-24 Score=162.91 Aligned_cols=154 Identities=32% Similarity=0.511 Sum_probs=121.1
Q ss_pred CCCHHHHHHHHHHHhccc-cCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASS-VEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~-~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k 79 (192)
++|||+++|+.+++++++ . |++++++++.+. ..+++.+||+||||||+|++++|++||
T Consensus 14 ~~GnT~~~a~~i~~~l~~~~-g~~v~~~~l~~~--------------------~~~~l~~aD~ii~gsP~y~g~~~~~lk 72 (188)
T 2ark_A 14 RTGNTKKMAELVAEGARSLE-GTEVRLKHVDEA--------------------TKEDVLWADGLAVGSPTNMGLVSWKMK 72 (188)
T ss_dssp SSSHHHHHHHHHHHHHHTST-TEEEEEEETTTC--------------------CHHHHHHCSEEEEEEECBTTBCCHHHH
T ss_pred CCcHHHHHHHHHHHHHhhcC-CCeEEEEEhhhC--------------------CHHHHHhCCEEEEEeCccCCcCCHHHH
Confidence 589999999999999986 4 889999999863 258899999999999999999999999
Q ss_pred HHHHhhcc-ccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcccee
Q 029532 80 AFLDATGG-LWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~-~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
.|||++.. .| ..++||++++|+++|+..++...++..+...|..+||.+++.+...+. .....||...
T Consensus 73 ~fld~~~~~~~--~~l~gk~~~~~~t~g~~~g~~~~~l~~l~~~l~~~g~~~~~~~~~~~~--------~~~~~~g~~~- 141 (188)
T 2ark_A 73 RFFDDVLGDLW--GEIDGKIACAFSSSGGWGGGNEVACMSILTMLMNFGFLVFGVTDYVGK--------KFTLHYGAVV- 141 (188)
T ss_dssp HHHHHTGGGTT--TSCTTCEEEEEEEESSBTSSHHHHHHHHHHHHHHTTCEECCEEEEEET--------TEEESSSEEE-
T ss_pred HHHHHHhhhhH--HHhCCCeEEEEEECCCCCCCHHHHHHHHHHHHHHCCcEEeCCCccccc--------cccCCCccee-
Confidence 99999863 22 468999999999976545566677888988888999999864221000 0011233221
Q ss_pred cCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhc
Q 029532 159 AGDGSRQPT-ELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 159 ~~~~~~~p~-~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
...|+ ++++++|+++|++|++.+++++.
T Consensus 142 ----~~~p~~~~~~~~~~~~g~~la~~~~~~~~ 170 (188)
T 2ark_A 142 ----AGEPRSEEEKEACRRLGRRLAEWVAIFVD 170 (188)
T ss_dssp ----ESSCCSHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ----ecCCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 24688 99999999999999999988763
No 9
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=99.91 E-value=3.9e-24 Score=152.94 Aligned_cols=128 Identities=24% Similarity=0.360 Sum_probs=109.5
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchH--HH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAA--QF 78 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~--~~ 78 (192)
++|||+++|+.|++++++ .|++++++++.+. ..+++.++|.||||+|||++++++ .+
T Consensus 8 ~tGnT~~iA~~ia~~l~~-~g~~v~~~~~~~~--------------------~~~~l~~~d~iiig~pty~~g~~p~~~~ 66 (138)
T 5nul_A 8 GTGNTEKMAELIAKGIIE-SGKDVNTINVSDV--------------------NIDELLNEDILILGCSAMTDEVLEESEF 66 (138)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCCCEEEEGGGC--------------------CHHHHTTCSEEEEEECCBTTTBCCTTTH
T ss_pred CCchHHHHHHHHHHHHHH-CCCeEEEEEhhhC--------------------CHHHHhhCCEEEEEcCccCCCCCChHHH
Confidence 689999999999999998 5999999999763 247899999999999999998754 79
Q ss_pred HHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcccee
Q 029532 79 KAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+.|++++.. .++||++++|+++||.+ + .++..+.+.|...|+.+++.++.+
T Consensus 67 ~~fl~~l~~-----~l~~k~~~~f~t~g~~~-~--~a~~~l~~~l~~~G~~~v~~~~~~--------------------- 117 (138)
T 5nul_A 67 EPFIEEIST-----KISGKKVALFGSYGWGD-G--KWMRDFEERMNGYGCVVVETPLIV--------------------- 117 (138)
T ss_dssp HHHHHHHGG-----GCTTCEEEEEEEESSSC-S--HHHHHHHHHHHHTTCEECSCCEEE---------------------
T ss_pred HHHHHHHHh-----hcCCCEEEEEEecCCCC-C--hHHHHHHHHHHHCCCEEECCceEE---------------------
Confidence 999999852 28999999999999864 2 456789999999999999765542
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 159 AGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 159 ~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
+..|++++ ++|+++|++|++
T Consensus 118 ----~~~p~~~d-~~~~~~~~~l~~ 137 (138)
T 5nul_A 118 ----QNEPDEAE-QDCIEFGKKIAN 137 (138)
T ss_dssp ----ESSCGGGH-HHHHHHHHHHHT
T ss_pred ----ecCCCHHH-HHHHHHHHHHhc
Confidence 25799999 999999999975
No 10
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=99.89 E-value=3.9e-22 Score=155.75 Aligned_cols=166 Identities=15% Similarity=0.101 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
+|||++|++++++++++ .|+++++++|.+.... .+ .. ...++.. ...++|.+||+|||+||+||+++|++||+|
T Consensus 47 ~s~t~~La~~~~~~l~~-~g~eve~idL~~~pl~-~~--d~-~~~d~~~-~l~~~i~~AD~iI~~sP~Yn~sipa~LKn~ 120 (247)
T 2q62_A 47 VSYSRLLAEEARRLLEF-FGAEVKVFDPSGLPLP-DA--AP-VSHPKVQ-ELRELSIWSEGQVWVSPERHGAMTGIMKAQ 120 (247)
T ss_dssp SCHHHHHHHHHHHHHHH-TTCEEEECCCTTCCCT-TS--SC-TTSHHHH-HHHHHHHHCSEEEEEEECSSSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhh-CCCEEEEEEhhcCCCC-cC--CC-CCCHHHH-HHHHHHHHCCEEEEEeCCCCCCccHHHHHH
Confidence 58999999999999988 6999999999885321 11 00 0001111 136899999999999999999999999999
Q ss_pred HHhhccccc-cCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceecC
Q 029532 82 LDATGGLWR-TQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 82 ld~~~~~~~-~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
||++...|. ...++||++++++++|+.+ +. .++..++..|...||.+++..+.++ ..+. .+.+
T Consensus 121 iD~l~~~~~~~~~l~gK~v~~v~tsG~~g-g~-~a~~~Lr~~l~~lg~~~v~~~v~i~------------~~~~--~fd~ 184 (247)
T 2q62_A 121 IDWIPLSTGSIRPTQGKTLAVMQVSGGSQ-SF-NAVNQMRILGRWMRMITIPNQSSVA------------KAFQ--EFDA 184 (247)
T ss_dssp HHTSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEECSCCEEES------------SGGG--GBCT
T ss_pred HHHhhhccCcccccCCCEEEEEEeCCCcc-HH-HHHHHHHHHHHHCCCEEeCCEEEEe------------cchh--ccCC
Confidence 999976542 2468999999999988764 33 4677899999999999986544321 1111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
+|. ..+++..++++.++++|++.+++++.
T Consensus 185 ~g~-l~d~~~~~~l~~~~~~l~~~~~~l~~ 213 (247)
T 2q62_A 185 NGR-MKPSSYYDRVVDVMEELVKFTLLTRD 213 (247)
T ss_dssp TSC-BCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCC-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 232 34677889999999999999987763
No 11
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=99.88 E-value=1.2e-22 Score=158.40 Aligned_cols=156 Identities=16% Similarity=0.135 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHhccccC-CceeEEEEcCCCCC--H----HHhcccCCCC-C--CCCCCCChhHhhhCCEEEEeccccC
Q 029532 2 YGHVEKLAEEIKKGASSVE-GVEAKLWQVPETLP--E----EVLGKMSAPP-K--SDVPIITPNELAEADGFVFGFPTRF 71 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~-g~ev~~~~l~~~~~--~----~~~~~~~~~~-~--~~~~~~~~~~l~~aD~ii~gsP~y~ 71 (192)
+|||.+|++.+++++++ . |++|+++++.+..+ | ..|...+.|+ . +++.. ..++|.+||+|||+||+||
T Consensus 14 ~s~T~~la~~i~~~l~~-~~g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~-~~~~l~~AD~iI~~sP~y~ 91 (242)
T 1sqs_A 14 NSKTLEYTKRLSSIISS-RNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGV-IKKELLESDIIIISSPVYL 91 (242)
T ss_dssp TCHHHHHHHHHHHHHHH-HSCCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHH-HHHHHHHCSEEEEEEEECS
T ss_pred CChHHHHHHHHHHHHHH-hcCCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHH-HHHHHHHCCEEEEEccccc
Confidence 59999999999999987 5 88999999988632 2 2222112233 2 33322 3688999999999999999
Q ss_pred CCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCC
Q 029532 72 GMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGS 151 (192)
Q Consensus 72 g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~ 151 (192)
+++|++||+|||++...+....+.||++++|+++|+.+. ..++..++..|...|+.+++. +..
T Consensus 92 ~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~g~--~~~~~~l~~~l~~~G~~~v~~-~~~-------------- 154 (242)
T 1sqs_A 92 QNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGS--DNVSEYLRDIFSYMGGQILHQ-VSI-------------- 154 (242)
T ss_dssp SSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSCCS--CCHHHHHHHHHHHTTCEEEEE-EEE--------------
T ss_pred cCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCCch--hhHHHHHHHHHHHCCCeeeeE-EEE--------------
Confidence 999999999999996433233689999999999987532 245668888889999999874 210
Q ss_pred CCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 152 PYGAGTFAGDGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 152 ~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
+ ..++++.+++++++|++|++.+++
T Consensus 155 ------~-----~~~~~~~~~~~~~~~~~la~~i~~ 179 (242)
T 1sqs_A 155 ------T-----NSLKDIAEAQLMEATYKIEDVLEG 179 (242)
T ss_dssp ------E-----GGGGGGHHHHHHHHHHHHHHHHTT
T ss_pred ------e-----ccCChHHHHHHHHHHHHHHHHHhc
Confidence 0 112336899999999999998754
No 12
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=99.88 E-value=1.4e-21 Score=154.51 Aligned_cols=167 Identities=12% Similarity=0.099 Sum_probs=122.6
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
.|||++|++++++++++ .|+++++++|.+..... +.. ....++.. ...++|.+||+|||+||+||+++|++||+|
T Consensus 71 ~S~T~~La~~~~~~l~~-~G~eveiidL~dlpl~~-~d~--~~~~d~v~-~l~e~I~~ADgiV~aSP~Yn~sipg~LKn~ 145 (279)
T 2fzv_A 71 RSFSRLAVEEAARLLQF-FGAETRIFDPSDLPLPD-QVQ--SDDHPAVK-ELRALSEWSEGQVWCSPERHGQITSVMKAQ 145 (279)
T ss_dssp SCHHHHHHHHHHHHHHH-TTCEEEEBCCTTCCCTT-TSG--GGCCHHHH-HHHHHHHHCSEEEEEEEEETTEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHhh-CCCEEEEEehhcCCCCc-cCc--cCCCHHHH-HHHHHHHHCCeEEEEcCccccCcCHHHHHH
Confidence 58999999999999988 69999999998863211 100 00001111 136899999999999999999999999999
Q ss_pred HHhhccccc-cCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceecC
Q 029532 82 LDATGGLWR-TQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 82 ld~~~~~~~-~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
||++...|. ...++||++++++++|+.+ +. .++..++..|...||.+++..+.++ ..+. .+.+
T Consensus 146 IDrl~~~~g~~~~l~gK~v~lv~tsG~~g-g~-~a~~~Lr~~l~~lg~~vv~~~v~v~------------~~~~--~fd~ 209 (279)
T 2fzv_A 146 IDHLPLEMAGIRPTQGRTLAVMQVSGGSQ-SF-NAVNTLRLLGRWMRMFTIPNQSSIA------------KAFQ--EFDA 209 (279)
T ss_dssp HHHSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEECSCCEEET------------TGGG--TBCT
T ss_pred HHHHhhhcccccccCCCEEEEEEECCCcc-HH-HHHHHHHHHHHhcCcEEeCCEEEEe------------cccc--ccCC
Confidence 999976542 2368999999999988764 33 5677899999999999986544321 1111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
+|. ..+++..++++.++++|++.+++++.
T Consensus 210 ~G~-l~d~~~~~~l~~~~~~l~~~~~~l~~ 238 (279)
T 2fzv_A 210 AGR-MKPSPYYDRIADVMEELVRFTALVRP 238 (279)
T ss_dssp TSC-BCSSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCC-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 232 34667889999999999999887764
No 13
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=99.88 E-value=3.2e-22 Score=142.41 Aligned_cols=126 Identities=19% Similarity=0.259 Sum_probs=104.9
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHH--H
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQ--F 78 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~--~ 78 (192)
++|||+++|+.+++++.+ .|++++++++.+. ..+++.++|.|||+||+|++++|++ +
T Consensus 9 ~tGnT~~~a~~i~~~l~~-~g~~v~~~~~~~~--------------------~~~~l~~~d~vi~g~p~y~~~~~~~~~~ 67 (137)
T 2fz5_A 9 GTGNTEAMANEIEAAVKA-AGADVESVRFEDT--------------------NVDDVASKDVILLGCPAMGSEELEDSVV 67 (137)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCCEEEEETTSC--------------------CHHHHHTCSEEEEECCCBTTTBCCHHHH
T ss_pred CCChHHHHHHHHHHHHHh-CCCeEEEEEcccC--------------------CHHHHhcCCEEEEEccccCCCCCCHHHH
Confidence 589999999999999988 5899999998763 2478999999999999999999998 9
Q ss_pred HHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcccee
Q 029532 79 KAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+.|+|++. ..++||++++|+++||.. + .++..+...|...|+.+++ .+.+
T Consensus 68 ~~fl~~l~-----~~l~~k~~~~~~t~g~~~-~--~~~~~l~~~l~~~g~~~~~-~~~~--------------------- 117 (137)
T 2fz5_A 68 EPFFTDLA-----PKLKGKKVGLFGSYGWGS-G--EWMDAWKQRTEDTGATVIG-TAIV--------------------- 117 (137)
T ss_dssp HHHHHHHG-----GGCSSCEEEEEEEESSCC-S--HHHHHHHHHHHHTTCEEEE-EEEE---------------------
T ss_pred HHHHHHhh-----hhcCCCEEEEEEecCCCC-c--hHHHHHHHHHHHCCCEEcC-cEEE---------------------
Confidence 99999985 368999999999998853 2 4567888889999999983 3321
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 159 AGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 159 ~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
...|++ +++++++|+++++
T Consensus 118 ----~g~~~~--~~~~~~~~~~l~~ 136 (137)
T 2fz5_A 118 ----NEMPDN--APECKELGEAAAK 136 (137)
T ss_dssp ----ESSSSS--CTHHHHHHHHHHT
T ss_pred ----eeCCCh--HHHHHHHHHHHhc
Confidence 124554 9999999999874
No 14
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=99.87 E-value=1.7e-22 Score=152.91 Aligned_cols=162 Identities=18% Similarity=0.106 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHh-ccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 2 YGHVEKLAEEIKKG-ASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 2 ~GnT~~la~~i~~~-l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
+|||+++|+.++++ +++ .|++++++++.+.... .|..| +...++.. ...+++.+||+|||+||+||+++|+.||+
T Consensus 15 ~g~t~~la~~i~~~~l~~-~g~~v~~~dl~~~~~~-~~~~~-~~~~~~~~-~~~~~i~~aD~ii~~sP~y~~~~p~~lK~ 90 (197)
T 2vzf_A 15 NSTTAKLAEYALAHVLAR-SDSQGRHIHVIDLDPK-ALLRG-DLSNAKLK-EAVDATCNADGLIVATPIYKASYTGLLKA 90 (197)
T ss_dssp TCHHHHHHHHHHHHHHHH-SSEEEEEEEGGGSCHH-HHHHT-CTTSHHHH-HHHHHHHHCSEEEEEEECBTTBCCHHHHH
T ss_pred CChHHHHHHHHHHHHHHH-CCCeEEEEEccccCch-hhccc-ccCcHHHH-HHHHHHHHCCEEEEEeCccCCCCCHHHHH
Confidence 69999999999999 988 5899999999875332 22221 11111111 12578999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHH-HHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceec
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTAL-TAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~-~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|||++. ...++||++++|+++|+.+ +. .++. .++..|...|+.+++.+.... ...+ .+.
T Consensus 91 ~ld~l~----~~~~~gK~~~~~~tgg~~~-~~-~a~~~~l~~~l~~~g~~~v~~~v~~~-----------~~~~---~~~ 150 (197)
T 2vzf_A 91 FLDILP----QFALAGKAALPLATGGSPA-HV-LALDYGLRPVLHSMGVRHVVQSFFLV-----------QSQF---SVV 150 (197)
T ss_dssp HHTTSC----TTTTTTCEEEEEEEESSGG-GG-GHHHHTHHHHHHTTTCSEECCCEEEE-----------SCCC------
T ss_pred HHHhcc----ccccCCCEEEEEEECCCcc-hh-hHHHHHHHHHHHHcCCEeccceEEEe-----------chhh---ccc
Confidence 999985 3468999999999977753 22 2443 688888899999987644321 0111 011
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029532 160 GDGSRQPTELELEQAFHQGKHIAGIAKKL 188 (192)
Q Consensus 160 ~~~~~~p~~~~~~~~~~lg~~la~~~~~~ 188 (192)
.++. .++++..++++++++++++.+++.
T Consensus 151 ~~g~-~~d~~~~~~l~~~~~~l~~~i~~~ 178 (197)
T 2vzf_A 151 DGKL-AVEDDVASQLNNAIDHFRLSLSSE 178 (197)
T ss_dssp --CC-CSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCC-cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1233 689999999999999999876543
No 15
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.87 E-value=1.4e-21 Score=141.16 Aligned_cols=133 Identities=16% Similarity=0.196 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhh-hCCEEEEeccccC---CCchH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELA-EADGFVFGFPTRF---GMMAA 76 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~aD~ii~gsP~y~---g~~~~ 76 (192)
++|||+++|+.|++++.+ .|++++++++.+.. ..++. ++|.||||+|+|+ |.+|+
T Consensus 11 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~~~--------------------~~~l~~~~d~ii~g~pty~~~~G~~p~ 69 (148)
T 3f6r_A 11 STGNTESIAQKLEELIAA-GGHEVTLLNAADAS--------------------AENLADGYDAVLFGCSAWGMEDLEMQD 69 (148)
T ss_dssp SSSHHHHHHHHHHHHHHT-TTCEEEEEETTTBC--------------------CTTTTTTCSEEEEEECEECSSSCEECH
T ss_pred CCchHHHHHHHHHHHHHh-CCCeEEEEehhhCC--------------------HhHhcccCCEEEEEecccCCCCCCCcH
Confidence 589999999999999988 59999999988642 25677 9999999999998 69999
Q ss_pred HHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccc
Q 029532 77 QFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAG 156 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
.++.|++++. ...++||++++|++++...+....+...+...|...|+.+++.+..+
T Consensus 70 ~~~~fl~~l~----~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~------------------- 126 (148)
T 3f6r_A 70 DFLSLFEEFD----RIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKM------------------- 126 (148)
T ss_dssp HHHHHHTTGG----GTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEEE-------------------
T ss_pred HHHHHHHHhh----ccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceEe-------------------
Confidence 9999999986 23689999999999433222333456689999999999998765432
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029532 157 TFAGDGSRQPTELELEQAFHQGKHIAGI 184 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~~~~~~lg~~la~~ 184 (192)
+..|++ +++++++++++|++.
T Consensus 127 ------~~~p~~-~~~~~~~~~~~l~~~ 147 (148)
T 3f6r_A 127 ------EGDASN-DPEAVASFAEDVLKQ 147 (148)
T ss_dssp ------ESSGGG-CHHHHHHHHHHHHHT
T ss_pred ------ecCcch-HHHHHHHHHHHHHhh
Confidence 246888 999999999999863
No 16
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=99.87 E-value=1.3e-21 Score=147.44 Aligned_cols=166 Identities=14% Similarity=0.052 Sum_probs=115.2
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
+|||+++++.++++++ .|++++++++.+...+..|..+. ...++.. ...+++.+||+|||+||+||+++|++||+|
T Consensus 19 ~g~t~~la~~i~~~l~--~g~~v~~~dl~~~p~~~~~~~~~-~~~~~~~-~~~~~l~~aD~ii~~sP~y~~~~p~~lK~~ 94 (193)
T 1rtt_A 19 GSYNSAALQEAIGLVP--PGMSIELADISGIPLYNEDVYAL-GFPPAVE-RFREQIRAADALLFATPEYNYSMAGVLKNA 94 (193)
T ss_dssp TCHHHHHHHHHHTTCC--TTCEEEECCCTTCCCCCHHHHTT-CCCHHHH-HHHHHHHHCSEEEEECCEETTEECHHHHHH
T ss_pred CChHHHHHHHHHHhcc--CCCeEEEEeHHHCCCCCcccccc-CCCHHHH-HHHHHHHhCCEEEEEccccccCcCHHHHHH
Confidence 5999999999999997 38899999998843322221111 1111111 135799999999999999999999999999
Q ss_pred HHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecC-CccCCCCccccccccCCCCCccceecC
Q 029532 82 LDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPI-GYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 82 ld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
||++...+. ..++||++++|+++|+..++ ..++..++..+...|+.+++. .+.... .. ..+.+
T Consensus 95 iD~~~~~~~-~~l~gK~~~~~~t~gg~~g~-~~~~~~l~~~l~~~g~~~~~~~~~~~~~------------~~--~~~~~ 158 (193)
T 1rtt_A 95 IDWASRPPE-QPFSGKPAAILGASAGRFGT-ARAQYHLRQTLVFLDVHPLNKPEVMISS------------AQ--NAFDA 158 (193)
T ss_dssp HHHHTCSSS-CTTTTCEEEEEEECSSTTTT-HHHHHHHHHHHHHHTCEECCSSCEEECS------------GG--GTBCS
T ss_pred HHHhccccC-cccCCCeEEEEEeCCCCCcc-HHHHHHHHHHHHHcCCEEcCCCeEEecc------------hH--hhcCc
Confidence 999974332 45899999999998654444 356778999999999999875 333210 00 01222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAKKL 188 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~~~ 188 (192)
++. ..+++..++++++++++++.+.+.
T Consensus 159 ~~~-~~~~~~~~~l~~~~~~l~~~~~~~ 185 (193)
T 1rtt_A 159 QGR-LLDDKARELIQQQLQALQLWVREG 185 (193)
T ss_dssp TTC-BCCHHHHHHHHHHHHHHHC-----
T ss_pred CCC-cCCHHHHHHHHHHHHHHHHHHHHh
Confidence 232 347788999999999998877654
No 17
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=99.87 E-value=5.1e-22 Score=149.78 Aligned_cols=166 Identities=13% Similarity=0.007 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
+|+|.++++.++++++. |+++++++|.+. |...+ ...+..++......++|.+||+|||+||+||+++|++||+|
T Consensus 15 ~s~t~~la~~~~~~~~~--~~~v~~~dl~~l-p~~~~--~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y~~~~p~~lK~~ 89 (192)
T 3fvw_A 15 GSFNRQLAKKAETIIGD--RAQVSYLSYDRV-PFFNQ--DLETSVHPEVAHAREEVQEADAIWIFSPVYNYAIPGPVKNL 89 (192)
T ss_dssp TCHHHHHHHHHHHHHTT--SSEEEECCCSSC-CCCCG--GGTTSCCHHHHHHHHHHHHCSEEEEECCCBTTBCCHHHHHH
T ss_pred CCHHHHHHHHHHHhcCC--CCEEEEEeCccC-CCCCc--ccccCCcHHHHHHHHHHHhCCEEEEECcccccCCCHHHHHH
Confidence 68999999999999973 889999999874 32111 11111111111136899999999999999999999999999
Q ss_pred HHhhccccc------cCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcc
Q 029532 82 LDATGGLWR------TQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGA 155 (192)
Q Consensus 82 ld~~~~~~~------~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~ 155 (192)
||++...+. ...|+||++++++++|+.++ ..++..++..|...|+.+++......+. .
T Consensus 90 iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~g~--~~~~~~l~~~l~~~G~~~v~~~v~~~~~--------------~ 153 (192)
T 3fvw_A 90 LDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGASP--EEVFEDYRSLLPFIRMHLVDQLTGVPIN--------------S 153 (192)
T ss_dssp HHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC-----CCSHHHHHHHHHTTCEECCCCEEECCC--------------T
T ss_pred HHHhhccccccCCCCCccCCCCEEEEEEeCCCcch--hHHHHHHHHHHHHcCCeeecceeecccc--------------h
Confidence 999975321 23689999999999887432 2345678888999999999864432111 1
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029532 156 GTFAGDGSRQPTELELEQAFHQGKHIAGIAKKLK 189 (192)
Q Consensus 156 ~~~~~~~~~~p~~~~~~~~~~lg~~la~~~~~~~ 189 (192)
..|. +|...++++..++++.+.+++.+.+.++.
T Consensus 154 ~~f~-~g~~~~~~~~~~~l~~~~~~l~~~~~~~~ 186 (192)
T 3fvw_A 154 EAWS-TGILKVSAEKLAELSAQADALLSAIENLE 186 (192)
T ss_dssp THHH-HCCCCCCHHHHHHHHHHHHHHHHHTTC--
T ss_pred hhcc-CCccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 1121 24445689999999999999998877665
No 18
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.87 E-value=1.9e-21 Score=162.12 Aligned_cols=139 Identities=27% Similarity=0.282 Sum_probs=114.3
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|+.+++++.+ .|++++++++.+....+. .+++.+||+||||||+|++++|+++|+
T Consensus 266 ~~GnT~~la~~i~~~l~~-~g~~v~~~~l~~~~~~~~----------------~~~l~~~D~iiigsP~y~~~~~~~~k~ 328 (414)
T 2q9u_A 266 MYGTTHRMALALLDGARS-TGCETVLLEMTSSDITKV----------------ALHTYDSGAVAFASPTLNNTMMPSVAA 328 (414)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEEGGGCCHHHH----------------HHHHHTCSEEEEECCCBTTBCCHHHHH
T ss_pred CCchHHHHHHHHHHHHHh-CCCeEEEEEcCcCCHHHH----------------HHHHHhCCEEEEEcCccCcCchHHHHH
Confidence 479999999999999988 589999999987432211 368999999999999999999999999
Q ss_pred HHHhhccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHH-cCCEEecCC-ccCCCCccccccccCCCCCccce
Q 029532 81 FLDATGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVH-HGMIFVPIG-YTFGAGMFEMEKVKGGSPYGAGT 157 (192)
Q Consensus 81 fld~~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~-~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
|||++... .+ +||++++|+++||.+ + ++..+...|.. .|+.+++.+ +..
T Consensus 329 fld~l~~~----~~~~~K~~~~~~t~g~~~-~---a~~~l~~~l~~~~g~~~~~~~~~~~-------------------- 380 (414)
T 2q9u_A 329 ALNYVRGL----TLIKGKPAFAFGAFGWSN-R---AVPDIVAELRDGCKADVYDEKGITF-------------------- 380 (414)
T ss_dssp HHHHHHHH----TTTTTSBEEEEEEESSSC-C---HHHHHHHHHHHTSCCBCCCSSCEEE--------------------
T ss_pred HHHHHHhh----cccCCCEEEEEEecCCCc-h---hHHHHHHHHHhhcCcEEccCccEEE--------------------
Confidence 99998632 35 899999999998863 3 34578888888 999988754 321
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029532 158 FAGDGSRQPTELELEQAFHQGKHIAGIAKKLK 189 (192)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~~lg~~la~~~~~~~ 189 (192)
...|+++++++++++|+++++.+++++
T Consensus 381 -----~~~p~~~~~~~~~~~g~~l~~~~~~~~ 407 (414)
T 2q9u_A 381 -----KFNYTEELLEQAYNAGVDLGKRAIAYC 407 (414)
T ss_dssp -----ESCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----eeCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 246899999999999999999887765
No 19
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.86 E-value=1e-21 Score=163.75 Aligned_cols=131 Identities=17% Similarity=0.203 Sum_probs=107.1
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCC---CHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETL---PEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQ 77 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~ 77 (192)
|||||++||++|++++.+ .|+++.++++.+.. .+++ .+++.+||+||||||||+++++++
T Consensus 275 ~yGnTe~mA~~ia~gl~~-~Gv~~~~~~~~d~~~~~~s~i----------------~~~i~~~~~ivlGspT~~~~~~p~ 337 (410)
T 4dik_A 275 MYGFVENVMKKAIDSLKE-KGFTPVVYKFSDEERPAISEI----------------LKDIPDSEALIFGVSTYEAEIHPL 337 (410)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEEECSSCCCCHHHH----------------HHHSTTCSEEEEEECCTTSSSCHH
T ss_pred ccChHHHHHHHHHHHHHh-cCCceEEEEeccCCCCCHHHH----------------HHHHHhCCeEEEEeCCcCCcCCHH
Confidence 799999999999999999 69998888776642 2222 478999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccce
Q 029532 78 FKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGT 157 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
|+.|++.+.. ..++||++++|+|+||++++.+ .+...|...|++++++....
T Consensus 338 ~~~~l~~l~~----~~~~~K~~~~FGSyGWsg~a~~----~~~~~l~~~~~~~v~~~~~~-------------------- 389 (410)
T 4dik_A 338 MRFTLLEIID----KANYEKPVLVFGVHGWAPSAER----TAGELLKETKFRILSFTEIK-------------------- 389 (410)
T ss_dssp HHHHHHHHHH----HCCCCCEEEEEEECCCCCTTSC----CHHHHHTTSSCEEEEEEEEC--------------------
T ss_pred HHHHHHHHHh----cccCCCEEEEEECCCCCcHHHH----HHHHHHHHCCCEEECcEEEE--------------------
Confidence 9999999863 3678999999999999876544 68888899999998753321
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHH
Q 029532 158 FAGDGSRQPTELELEQAFHQGKHI 181 (192)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~~lg~~l 181 (192)
...++++++++|.+++++-
T Consensus 390 -----~~~~de~~lee~~~~~~~~ 408 (410)
T 4dik_A 390 -----GSNMDERKIEEAISLLKKE 408 (410)
T ss_dssp -----STTCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHh
Confidence 1357888888888887654
No 20
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=99.86 E-value=2.7e-21 Score=146.58 Aligned_cols=166 Identities=19% Similarity=0.158 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHhccccCCceeE-EEEcCCCCCH---HHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAK-LWQVPETLPE---EVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~-~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~ 77 (192)
.++|++|++.+++.+++ |++++ +++|.+. |. +.. .+. ..++.. ...++|.+||+|||+||+||+++|+.
T Consensus 19 ~s~t~~la~~~~~~~~~--g~~v~~~idL~~l-P~~~~~~~-~~~--~~~~~~-~~~~~i~~AD~iVi~tP~Y~~s~p~~ 91 (199)
T 4hs4_A 19 ASFNAAVARALPEIAPE--GIAITPLGSIGTF-PHYSQDVQ-EEG--FPAPVL-TMAQQIATADAVVIVTPEYNYSVPGV 91 (199)
T ss_dssp TCHHHHHHHHHHHHCCT--TEEEEECCCGGGS-CCCCHHHH-HHC--CCHHHH-HHHHHHHHSSEEEEEECCBTTBCCHH
T ss_pred CChHHHHHHHHHHHccC--CCEEEEEEehhhc-CCCCcccc-ccC--CCHHHH-HHHHHHHhCCEEEEEcCccCCCcCHH
Confidence 58999999999999964 88999 9999874 31 111 110 111111 13689999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecC-CccCCCCccccccccCCCCCccc
Q 029532 78 FKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPI-GYTFGAGMFEMEKVKGGSPYGAG 156 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~-~~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
||+|||++.. +....|.||++++++++|+..|+. .++..++..|...|+.+++. .+.++. . ..
T Consensus 92 LK~~iD~~~~-~~~~~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~il~~lg~~~v~~~~v~i~~------------~--~~ 155 (199)
T 4hs4_A 92 LKNAIDWLSR-VSPQPLAGKPVALVTASPGMIGGA-RAQNHLRQSLVFLDAYVLNRPEAMIGQ------------V--TG 155 (199)
T ss_dssp HHHHHHHHTT-SSSCTTTTCEEEEEEECSSSSCSH-HHHHHHHHHHHHTTCEECCSSCEEECS------------G--GG
T ss_pred HHHHHHHhcc-cCCcccCCCEEEEEEeCCCCcccH-HHHHHHHHHHHHcCCEEcCCCeEEeec------------h--hh
Confidence 9999999974 223578999999999986655553 56788999999999999974 232210 0 01
Q ss_pred eecCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhhcC
Q 029532 157 TFAGD-GSRQPTELELEQAFHQGKHIAGIAKKLKGS 191 (192)
Q Consensus 157 ~~~~~-~~~~p~~~~~~~~~~lg~~la~~~~~~~~~ 191 (192)
.|+++ |. ..|++..++++.+.++++..+++++..
T Consensus 156 ~fd~~~g~-l~d~~~~~~l~~~~~~l~~~~~~~~~~ 190 (199)
T 4hs4_A 156 KVDAQTLE-LSDVATREFLARQLDALAALARTLSPR 190 (199)
T ss_dssp TBCSSSCC-BCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred hcCCcCCC-cCCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 13322 43 347888999999999999999877643
No 21
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=99.86 E-value=1.7e-21 Score=146.64 Aligned_cols=158 Identities=18% Similarity=0.229 Sum_probs=111.9
Q ss_pred CCHHHHHHHHHHH----hcccc-CCceeEEEEcCCCCCHHHhcccCCCCC-CCCCCCChhHhhhCCEEEEeccccCCCch
Q 029532 2 YGHVEKLAEEIKK----GASSV-EGVEAKLWQVPETLPEEVLGKMSAPPK-SDVPIITPNELAEADGFVFGFPTRFGMMA 75 (192)
Q Consensus 2 ~GnT~~la~~i~~----~l~~~-~g~ev~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~aD~ii~gsP~y~g~~~ 75 (192)
.++|.+|++.+++ .+++. .|+++++++|.+.. ...|..+..+.. ++.. ...++|.+||+|||+||+||+++|
T Consensus 24 ~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~-l~~~~~~~~~~~~~~~~-~~~~~i~~AD~ivi~sP~Y~~~~~ 101 (191)
T 3k1y_A 24 PSSTRQIADSISEAVTAAVSARGEALSVSTIELSELI-PDLMTAMTTRVHTTKLE-EITSALSASDGLVVATPVFKASYT 101 (191)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCH-HHHTTTTSSSCCCHHHH-HHHHHHHHCSEEEEEEECBTTBSC
T ss_pred CCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCC-CcccChhhcCCCCHHHH-HHHHHHHHCCEEEEEcCccCCcCc
Confidence 6899999999999 55542 17899999999863 334433322211 2221 247899999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHH-HHHHHHHcCCEEecCCccCCCCccccccccCCCCCc
Q 029532 76 AQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALT-AITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYG 154 (192)
Q Consensus 76 ~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~-~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g 154 (192)
++||+|||++. ...++||++++++++|+.++. . .+.. ++..|...|+.+++..+... ...
T Consensus 102 ~~lK~~iD~~~----~~~l~gK~~~~v~t~G~~~~~-~-~~~~~L~~il~~lg~~vv~~~v~~~-----------~~~-- 162 (191)
T 3k1y_A 102 GLFKMFFDILD----TDALTGMPTIIAATAGSARHS-L-VLDYALRPLLSYMRAVVVPTGVFAA-----------TED-- 162 (191)
T ss_dssp HHHHHHHHHSC----TTTTTTCEEEEEEEESSSTTT-T-HHHHTHHHHHHHTTCEECSCCEEEE-----------GGG--
T ss_pred HHHHHHHHHhh----hhhcCCCEEEEEEeCCCcchh-h-HHHHHHHHHHHHCCCEEcCcEEEec-----------hhh--
Confidence 99999999996 257899999999998876533 2 2333 78888899999997644320 001
Q ss_pred cceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 155 AGTFAGDGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
|. . . .+++..+++++++++++..+++
T Consensus 163 ---f~--~-~-~~~~~~~rl~~~~~~~~~~~~~ 188 (191)
T 3k1y_A 163 ---FG--G-P-EGAEFNKRIARAAGELASLIVE 188 (191)
T ss_dssp ---CS--H-H-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cC--C-C-CCHHHHHHHHHHHHHHHHHHHh
Confidence 11 0 0 1456677778888888877664
No 22
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.86 E-value=2e-21 Score=161.26 Aligned_cols=138 Identities=26% Similarity=0.335 Sum_probs=113.4
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|+.+++++.+ .|++++++++.+....+. .+++.+||+||||||+|++++|++||+
T Consensus 266 ~~gnT~~la~~i~~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~l~~~d~iiigsP~y~~~~~~~~k~ 328 (404)
T 2ohh_A 266 MHGSTRKMAHAIAEGAMS-EGVDVRVYCLHEDDRSEI----------------VKDILESGAIALGAPTIYDEPYPSVGD 328 (404)
T ss_dssp SSSHHHHHHHHHHHHHHT-TTCEEEEEETTTSCHHHH----------------HHHHHTCSEEEEECCEETTEECTHHHH
T ss_pred CChHHHHHHHHHHHHHHh-CCCeEEEEECCCCCHHHH----------------HHHHHHCCEEEEECccccccchHHHHH
Confidence 479999999999999988 589999999987532222 368999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceecC
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|||++...+... |+||++++|+++||.+++ +..++..|...|+.+++. +.+
T Consensus 329 ~ld~l~~~~~~~-l~~k~~~~~~~~g~~~~a----~~~l~~~l~~~g~~~~~~-~~~----------------------- 379 (404)
T 2ohh_A 329 LLMYLRGLKFNR-TLTRKALVFGSMGGNGGA----TGTMKELLAEAGFDVACE-EEV----------------------- 379 (404)
T ss_dssp HHHHHHHHCGGG-TCCEEEEEEEEESSSCCH----HHHHHHHHHHTTEEEEEE-EEE-----------------------
T ss_pred HHHHhhhccccc-cCCCEEEEEEecCCCChh----HHHHHHHHHHCCCEEEeE-EEE-----------------------
Confidence 999987544333 799999999999886432 447888889999999874 321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAK 186 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~ 186 (192)
...|+++++++++++++++++.++
T Consensus 380 --~~~~~~~~~~~~~~~~~~~~~~~~ 403 (404)
T 2ohh_A 380 --YYVPTGDELDACFEAGRKLAAEIR 403 (404)
T ss_dssp --ESSCCHHHHHHHHHHHHHHHHHHC
T ss_pred --eeCCCHHHHHHHHHHHHHHHHHHh
Confidence 145889999999999999998763
No 23
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=99.84 E-value=8.7e-21 Score=136.80 Aligned_cols=132 Identities=17% Similarity=0.161 Sum_probs=106.1
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhh-CCEEEEeccccC-CC--chH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAE-ADGFVFGFPTRF-GM--MAA 76 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-aD~ii~gsP~y~-g~--~~~ 76 (192)
++|||+++|+.+++++.+ .|++++++++.+.. ..++.+ +|.|||++|+|+ |. +|+
T Consensus 10 ~~Gnt~~~a~~i~~~l~~-~g~~v~~~~~~~~~--------------------~~~l~~~~d~ii~~~p~y~~g~~~~p~ 68 (147)
T 1f4p_A 10 TTGNTEYTAETIARELAD-AGYEVDSRDAASVE--------------------AGGLFEGFDLVLLGCSTWGDDSIELQD 68 (147)
T ss_dssp SSSHHHHHHHHHHHHHHH-HTCEEEEEEGGGCC--------------------STTTTTTCSEEEEEECEECSSSCEECT
T ss_pred CcCHHHHHHHHHHHHHHh-cCCeeEEEehhhCC--------------------HHHhcCcCCEEEEEeCCCCCCCcCCCh
Confidence 479999999999999987 58999999987631 256788 999999999994 67 799
Q ss_pred HHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccc
Q 029532 77 QFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAG 156 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
+++.|+|++.. ..++||++++|++++...++...+...+...|...|+.+++.++..
T Consensus 69 ~~~~fl~~l~~----~~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~------------------- 125 (147)
T 1f4p_A 69 DFIPLFDSLEE----TGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRI------------------- 125 (147)
T ss_dssp TTHHHHHTGGG----SCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEE-------------------
T ss_pred hHHHHHHHHHh----cccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhhccccc-------------------
Confidence 99999999862 3689999999999654433345677889999999999998754421
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 157 TFAGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
...|++ ++++++++++++++
T Consensus 126 ------~~~p~~-~~~~~~~~~~~l~~ 145 (147)
T 1f4p_A 126 ------DGDPRA-ARDDIVGWAHDVRG 145 (147)
T ss_dssp ------ESCGGG-GHHHHHHHHHHHHT
T ss_pred ------ccCchh-HHHHHHHHHHHHHh
Confidence 134665 88999999999875
No 24
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=99.84 E-value=7.2e-21 Score=143.58 Aligned_cols=165 Identities=19% Similarity=0.160 Sum_probs=115.3
Q ss_pred CCHHHHHHHHHHHhccccCCceeE-EEEcCCCCCH---HHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAK-LWQVPETLPE---EVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~-~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~ 77 (192)
.++|.+|++++.+.+ + .|++++ +++|.+. |. +....+ ...++.. ...++|.+||+|||+||+||+++|+.
T Consensus 17 ~s~t~~l~~~~~~~~-~-~g~~v~~~idL~~l-P~~~~~~~~~~--~~~~~~~-~l~~~i~~AD~iv~~sP~y~~~~~~~ 90 (193)
T 3svl_A 17 GSFNGMVARTLPKIA-P-ASMEVNALPSIADI-PLYDADVQQEE--GFPATVE-ALAEQIRQADGVVIVTPEYNYSVPGG 90 (193)
T ss_dssp TCHHHHHHHHGGGTS-C-TTEEEEECCCSTTC-CCCCHHHHHHT--CSCHHHH-HHHHHHHHSSEEEEEECCBTTBCCHH
T ss_pred CCHHHHHHHHHHHHc-c-CCCEEEEEEeHHHC-CCCCccccccc--CCCHHHH-HHHHHHHHCCEEEEEecccCCCCCHH
Confidence 589999999987755 4 488999 8999884 32 111111 1111111 13689999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC-ccCCCCccccccccCCCCCccc
Q 029532 78 FKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG-YTFGAGMFEMEKVKGGSPYGAG 156 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
||+|||++... ....+.||++++++++|+..|+. .++..++..|...|+.+++.+ +..+ .. ..
T Consensus 91 lK~~iD~~~~~-~~~~~~gK~~~~~~~s~g~~gg~-~a~~~Lr~~l~~lg~~v~~~~~~~~~------------~~--~~ 154 (193)
T 3svl_A 91 LKNAIDWLSRL-PDQPLAGKPVLIQTSSMGVIGGA-RCQYHLRQILVFLDAMVMNKPEFMGG------------VI--QN 154 (193)
T ss_dssp HHHHHHHHHTS-TTCTTTTCEEEEEEECSSTTTTH-HHHHHHHHHHHHTTCEECCSSCEEET------------TG--GG
T ss_pred HHHHHHHHhhc-CccccCCCeEEEEEeCCCCcchH-HHHHHHHHHHHHCCCEEcCCCeEeec------------ch--hh
Confidence 99999999742 13468999999999865444443 567889999999999998643 2110 00 11
Q ss_pred eecCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029532 157 TFAGD-GSRQPTELELEQAFHQGKHIAGIAKKLK 189 (192)
Q Consensus 157 ~~~~~-~~~~p~~~~~~~~~~lg~~la~~~~~~~ 189 (192)
.|.++ |. ..|++..++++.+.++++..+++++
T Consensus 155 ~f~~~~g~-l~d~~~~~~l~~~~~~~~~~~~~~~ 187 (193)
T 3svl_A 155 KVDPQTGE-VIDQGTLDHLTGQLTAFGEFIQRVK 187 (193)
T ss_dssp GEETTTTE-ECCHHHHHHHHHHHHHHHHHTC---
T ss_pred hcCCCCCc-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 23332 43 3588899999999999998876654
No 25
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=99.84 E-value=1.4e-19 Score=136.02 Aligned_cols=162 Identities=17% Similarity=0.166 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC-HHHhcccCCCCCCCCCCC---ChhHhhhCCEEEEeccccCCCchHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP-EEVLGKMSAPPKSDVPII---TPNELAEADGFVFGFPTRFGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~-~~~~~~~~~~~~~~~~~~---~~~~l~~aD~ii~gsP~y~g~~~~~ 77 (192)
..+|.++|+.+++.+++ +++++++++.+... ++-.. .+.|+. ..+.|.+||+|||+||+||+++|+.
T Consensus 15 ~S~~~~la~~~~~~~~~--~~~~~~idl~dLP~~~~d~~-------~~~p~~~~~l~~~i~~aD~~ii~tPeYn~s~pg~ 85 (190)
T 3u7r_A 15 DSLNHKLMKVLQKLAEG--RLEFHLLHIGDLPHYNDDLW-------ADAPESVLRLKDRIEHSDAVLAITPEYNRSYPGM 85 (190)
T ss_dssp TCHHHHHHHHHHHHHTT--TEEEEECCGGGSCCCCGGGG-------GGCCHHHHHHHHHHHTSSEEEEECCCBTTBCCHH
T ss_pred CCHHHHHHHHHHHhccC--CCEEEEEecccCCCCCCCcc-------cCCCHHHHHHHHHHHhCCcEEEechhhcccCCHH
Confidence 35788999999887754 88999999987421 01110 011211 3578999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC-ccCCCCccccccccCCCCCccc
Q 029532 78 FKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG-YTFGAGMFEMEKVKGGSPYGAG 156 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
||+|||++...+....|.||++++++++++..|+. .++..++..|...|+.+++.+ +.++ ....
T Consensus 86 LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg~-~a~~~Lr~vl~~lg~~v~~~p~~~i~--------------~~~~ 150 (190)
T 3u7r_A 86 IKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAA-LAQARLKNDLLHVGTVMMSMPEAYIQ--------------WHAE 150 (190)
T ss_dssp HHHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTTH-HHHHHHHHHHHTTTCEECCCSCCEEE--------------CCGG
T ss_pred HHHHHHHhcccccCCccCCCEEEEEEeCCchhhHH-HHHHHHHHHHHHcCCEEccCCEEEEe--------------ccHh
Confidence 99999999755445679999999998876655554 567789999999999988642 2110 0111
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029532 157 TFAGDGSRQPTELELEQAFHQGKHIAGIAKKL 188 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~~~~~~lg~~la~~~~~~ 188 (192)
.|+.+|. ..|++..+.++.+.+++++.+++-
T Consensus 151 ~fd~~G~-l~de~~~~~l~~~~~~~~~~i~~~ 181 (190)
T 3u7r_A 151 AYAADGS-VTDEKTAKFLQGFVDAFVDWIEKH 181 (190)
T ss_dssp GBCTTSC-BCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHc
Confidence 2333443 457888899999999999988764
No 26
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=99.83 E-value=4.9e-21 Score=142.08 Aligned_cols=156 Identities=17% Similarity=0.116 Sum_probs=109.4
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCC-CCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAP-PKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
+|||+++++.+++.+.. +++++.+.... .|..+..| ..++.. ...+++.+||+|||+||+||+++|+.||+
T Consensus 13 ~g~t~~la~~i~~~l~~------~~i~l~~~~lp-~~~~~~~~~~~~~~~-~~~~~i~~aD~ii~~tP~y~~~~p~~lk~ 84 (174)
T 3gfs_A 13 HGRTRIAASYIAALYHT------DLIDLSEFVLP-VFNGEAEQSELLKVQ-ELKQRVTKADAIVLLSPEYHSGMSGALKN 84 (174)
T ss_dssp TCHHHHHHHHHHHHTTC------EEEETTTSCCC-CCCCCHHHHTCHHHH-HHHHHHHHCSSEEEEEECSSSSCCHHHHH
T ss_pred CCcHHHHHHHHHHhCcc------eEEeeecCCCC-CCCChhhccCcHHHH-HHHHHHHHCCEEEEEcCCcCCCCCHHHHH
Confidence 49999999999999853 35676554210 11111000 011111 13579999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceecC
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|||++.. ..++||++++|+++|+..++ ..++..++..|...|+.+++.++..+. ..++.
T Consensus 85 ~lD~l~~----~~~~gK~~~~~~~sgg~~g~-~~a~~~l~~~l~~~g~~~v~~~v~i~~----------------~~f~~ 143 (174)
T 3gfs_A 85 ALDFLSS----EQFKYKPVALLAVAGGGDGG-INALNNMRTVMRGVYANVIPKQLVLKP----------------VHIDV 143 (174)
T ss_dssp HHHTCCH----HHHTTCEEEEEEECCSTTCS-HHHHHHHHHHHHHTTCEEEEEEEEECG----------------GGEET
T ss_pred HHHHhCH----hhhCCCcEEEEEECCCChhH-HHHHHHHHHHHHHcCCEEecceEEech----------------hhcCC
Confidence 9999862 36899999999976544333 356778999999999999976543210 01221
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
+ ...++++..++++++.+.+++.++.
T Consensus 144 ~-~~~~~~~~~~~l~~~~~~l~~~~~~ 169 (174)
T 3gfs_A 144 E-NATVAENIKESIKELVEELSMFAKA 169 (174)
T ss_dssp T-TTEECHHHHHHHHHHHHHHHHHHHC
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHc
Confidence 1 2457888999999999999988764
No 27
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.83 E-value=4e-20 Score=153.15 Aligned_cols=136 Identities=22% Similarity=0.282 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|+.+++++.+ .|++++++++.+....+. .+++.++|+||||||+|++++|++|++
T Consensus 261 ~~GnT~~lA~~ia~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~~~~~d~ii~g~p~y~~~~~~~~~~ 323 (398)
T 1ycg_A 261 MWLSTEKMAHALMDGLVA-GGCEVKLFKLSVSDRNDV----------------IKEILDARAVLVGSPTINNDILPVVSP 323 (398)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEEGGGSCHHHH----------------HHHHHHCSEEEEECCCBTTBCCGGGHH
T ss_pred CccHHHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHH----------------HHHHHHCCEEEEECCccCccchHHHHH
Confidence 589999999999999987 589999999876432222 367899999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC-ccCCCCccccccccCCCCCccceec
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG-YTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|||++.. ..++||++++|+++||.+ . ++..++..|...|+.+++.+ +.+
T Consensus 324 ~l~~l~~----~~~~~k~~~~~~s~g~~~-~---a~~~l~~~l~~~g~~~~~~~~~~~---------------------- 373 (398)
T 1ycg_A 324 LLDDLVG----LRPKNKVGLAFGAYGWGG-G---AQKILEERLKAAKIELIAEPGPTV---------------------- 373 (398)
T ss_dssp HHHHHHH----HCCSSCEEEEEEEESSSC-C---HHHHHHHHHHHTTCEESCSSCCEE----------------------
T ss_pred HHHHHhc----cccCCCEEEEEEeCCCch-H---HHHHHHHHHHHCCeEEecCceEEE----------------------
Confidence 9999852 257999999999998853 3 34578888999999998754 421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029532 160 GDGSRQPTELELEQAFHQGKHIAGIAK 186 (192)
Q Consensus 160 ~~~~~~p~~~~~~~~~~lg~~la~~~~ 186 (192)
...|+++++++++++|+++++.++
T Consensus 374 ---~~~p~~~~~~~~~~~~~~l~~~~~ 397 (398)
T 1ycg_A 374 ---QWVPRGEDLQRCYELGRKIAARIA 397 (398)
T ss_dssp ---ESSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ---ecCCCHHHHHHHHHHHHHHHHHHh
Confidence 146889999999999999998753
No 28
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=99.82 E-value=7.5e-22 Score=147.27 Aligned_cols=155 Identities=19% Similarity=0.139 Sum_probs=100.1
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC--HHHhcccC---CCCCCCCCCCChhHhhhCCEEEEeccccCCCchH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP--EEVLGKMS---APPKSDVPIITPNELAEADGFVFGFPTRFGMMAA 76 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~--~~~~~~~~---~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~ 76 (192)
+|||++|++.+++++ +++.+++.+... |.-|..+. |...++... ..+++.+||+|||+||+||+++|+
T Consensus 16 ~g~t~~la~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~aD~ii~~~P~y~~~~p~ 88 (184)
T 1rli_A 16 GGNTDVLAEKAVQGF------DAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDS-IIERILQCHILIFATPIYWFGMSG 88 (184)
T ss_dssp CCHHHHHHHHHHTTT------CCEEEEC-----------------------CHHH-HHHHHHTCSEEEEEEECBTTBCCH
T ss_pred CccHHHHHHHHHcCC------eEEEEEcCCCCCccCCccccccCCCCCCCCCHHH-HHHHHHhCCEEEEEeCccccCCcH
Confidence 499999999998766 456777766532 22221111 111222221 357899999999999999999999
Q ss_pred HHHHHHHhhcccccc-------CCCCCCcEEEEEecCCCCC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCcccccccc
Q 029532 77 QFKAFLDATGGLWRT-------QQLAGKPAGMFYSTGSQGG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVK 148 (192)
Q Consensus 77 ~~k~fld~~~~~~~~-------~~l~gK~~~~~~s~g~~~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~ 148 (192)
+||.|||++...+.. ..++||++++|+++|+... +....+..++..+...|+.+++.... .
T Consensus 89 ~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~-----------~ 157 (184)
T 1rli_A 89 TLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFKGYVLG-----------E 157 (184)
T ss_dssp HHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHTHHHHHHHHHHHHHHTCEEEEEEEE-----------E
T ss_pred HHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccchHHHHHHHHHHHHHcCCccceEEEE-----------c
Confidence 999999998533211 2478999999999887421 12345678888889999999863211 0
Q ss_pred CCCCCccceecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 149 GGSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 149 ~~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
+... +...++++.+++++++|++++.
T Consensus 158 -g~~~--------~~~~~~~~~l~~a~~lg~~~~~ 183 (184)
T 1rli_A 158 -GNRP--------GDILRDHQALSAASRLLKRSDA 183 (184)
T ss_dssp -CSST--------TGGGGCHHHHHHHHHTTCCCCC
T ss_pred -cCCc--------chhhcCHHHHHHHHHhhhhccc
Confidence 1111 1123588999999999988763
No 29
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.82 E-value=1.2e-19 Score=150.47 Aligned_cols=138 Identities=22% Similarity=0.233 Sum_probs=114.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|+.+++++.+ .|++++++++.+....+. .+++.++|+||||||+|+++++++|+.
T Consensus 262 ~~Gnt~~lA~~i~~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~~~~~d~ii~gsp~~~~~~~~~~~~ 324 (402)
T 1e5d_A 262 MWHSTEKMARVLAESFRD-EGCTVKLMWCKACHHSQI----------------MSEISDAGAVIVGSPTHNNGILPYVAG 324 (402)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEETTTSCHHHH----------------HHHHHTCSEEEEECCCBTTBCCHHHHH
T ss_pred CChhHHHHHHHHHHHHHh-CCCeEEEEECCCCCHHHH----------------HHHHHHCCEEEEECCccCCCchHHHHH
Confidence 589999999999999988 588999999986432222 367899999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceecC
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|+|++.. ..++||++++|+++||.. .++..+...|...|+.+++.++.+
T Consensus 325 ~l~~l~~----~~l~~k~~~~f~t~g~~~----~a~~~l~~~l~~~G~~~~~~~~~~----------------------- 373 (402)
T 1e5d_A 325 TLQYIKG----LRPQNKIGGAFGSFGWSG----ESTKVLAEWLTGMGFDMPATPVKV----------------------- 373 (402)
T ss_dssp HHHHHHH----TCCCSCEEEEEEEESSSC----HHHHHHHHHHHHTTCBCCSCCEEE-----------------------
T ss_pred HHHHhhh----cccCCCEEEEEEcCCCcc----HHHHHHHHHHHHCCCEEecCceEE-----------------------
Confidence 9999852 358999999999998742 346688889999999998754321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029532 161 DGSRQPTELELEQAFHQGKHIAGIAKKL 188 (192)
Q Consensus 161 ~~~~~p~~~~~~~~~~lg~~la~~~~~~ 188 (192)
...|+++++++++++++++++.+++.
T Consensus 374 --~~~p~~~~~~~~~~~~~~l~~~l~~~ 399 (402)
T 1e5d_A 374 --KNVPTHADYEQLKTMAQTIARALKAK 399 (402)
T ss_dssp --ESSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --eeCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 24688999999999999999988653
No 30
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=99.69 E-value=2.2e-21 Score=147.13 Aligned_cols=167 Identities=17% Similarity=0.138 Sum_probs=116.8
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEE-EcCCCCCHHHhcccC-CCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLW-QVPETLPEEVLGKMS-APPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~-~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k 79 (192)
.|+|++|++.+++.+++ |++++++ +|.+. |. .+.... +...++... ..++|.+||+|||+||+||+++|++||
T Consensus 19 ~s~t~~la~~~~~~~~~--g~~v~~i~dl~~l-p~-~~~~~~~~~~~~~~~~-~~~~i~~AD~iIi~tP~Y~~s~p~~lK 93 (199)
T 3s2y_A 19 ASFNAAVARALPEIAPE--GIAITPLGSIGTF-PH-YSQDVQEEGFPAPVLT-MAQQIATADAVVIVTPEYNYSVPGVLK 93 (199)
Confidence 47999999999999975 8899999 99873 21 111111 111222222 468999999999999999999999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecC-CccCCCCccccccccCCCCCcccee
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPI-GYTFGAGMFEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~-~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+|||++...+.. .+.||++++|+++|+..++ ..++..++..|...|+.+++. .+.++. . ...|
T Consensus 94 ~~iD~l~~~~~~-~l~gK~v~~v~tsgg~~g~-~~a~~~Lr~~l~~lg~~~v~~~~v~i~~------------~--~~~f 157 (199)
T 3s2y_A 94 NAIDWLSRVSPQ-PLAGKPVALVTASPGMIGG-ARAQYHLRQSLVFLDAYVLNRPEAMIGQ------------V--TGKV 157 (199)
Confidence 999999754321 6899999999977544333 245678888888999999875 333210 0 0113
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029532 159 AGD-GSRQPTELELEQAFHQGKHIAGIAKKLKG 190 (192)
Q Consensus 159 ~~~-~~~~p~~~~~~~~~~lg~~la~~~~~~~~ 190 (192)
+++ |. ..|++..++++.+.++++..+++.+.
T Consensus 158 ~~~~g~-l~d~~~~~~l~~~~~~~~~~~~~~~~ 189 (199)
T 3s2y_A 158 DAQTLE-LSDVATREFLARQLDALAALARTLSP 189 (199)
Confidence 223 33 34566788888888888887765543
No 31
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=99.80 E-value=3.2e-20 Score=141.25 Aligned_cols=159 Identities=16% Similarity=0.066 Sum_probs=107.4
Q ss_pred CCHHHHHHHHHHHhccccCC--ceeEEEEcC--CCC--CHHHhcc-------------cCC---C-CCCCCCCCChhHhh
Q 029532 2 YGHVEKLAEEIKKGASSVEG--VEAKLWQVP--ETL--PEEVLGK-------------MSA---P-PKSDVPIITPNELA 58 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g--~ev~~~~l~--~~~--~~~~~~~-------------~~~---~-~~~~~~~~~~~~l~ 58 (192)
.|||.+|++.+++++++. | ++|++++|. +.. +|..|.. |.. | ..+++. ...++|.
T Consensus 16 ~s~t~~la~~~~~~~~~~-g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~l~ 93 (208)
T 2hpv_A 16 ESRSVRALETFLASYRET-NPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFN-ELTDQFL 93 (208)
T ss_dssp TCHHHHHHHHHHHHHHHH-CTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh-CCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHhhHHHHH-HHHHHHH
Confidence 599999999999999883 5 899999998 653 2211100 100 0 001111 1367899
Q ss_pred hCCEEEEeccccCCCchHHHHHHHHhhccc---c------ccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCE
Q 029532 59 EADGFVFGFPTRFGMMAAQFKAFLDATGGL---W------RTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMI 129 (192)
Q Consensus 59 ~aD~ii~gsP~y~g~~~~~~k~fld~~~~~---~------~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~ 129 (192)
+||+|||+||+||+++|++||+|||++... + ....++||++++|+++|+..++.......++..+...|+.
T Consensus 94 ~aD~iv~~~P~y~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~l~~~~~~~G~~ 173 (208)
T 2hpv_A 94 SADKVVIANPMWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVD 173 (208)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHHHHHHHHHHHHTTCC
T ss_pred hCCEEEEEeccccCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998642 1 1134799999999988766543233456677788889998
Q ss_pred EecCCccCCCCccccccccCCCCCccceecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 130 FVPIGYTFGAGMFEMEKVKGGSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 130 vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
+++. +.. ++. +......++.++++++.++++++
T Consensus 174 ~~~~-~~~---------------~~~-----~~~~~~~~~~l~~a~~~~~~l~~ 206 (208)
T 2hpv_A 174 QVDG-LFI---------------EGI-----DHFPDRAEELLNTAMTKATEYGK 206 (208)
T ss_dssp EEEE-EEE---------------ECT-----TTCGGGHHHHHHHHHHHHHHHHH
T ss_pred eeeE-EEE---------------ccc-----cCCHHHHHHHHHHHHHHHHHHHh
Confidence 8753 211 000 00011245567888888888875
No 32
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=99.80 E-value=9.7e-20 Score=136.82 Aligned_cols=123 Identities=16% Similarity=0.080 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHhccccC-----CceeEEEEcCCCC--CHHHhcccCC------C-CCCCCCCCChhHhhhCCEEEEec
Q 029532 2 YGHVEKLAEEIKKGASSVE-----GVEAKLWQVPETL--PEEVLGKMSA------P-PKSDVPIITPNELAEADGFVFGF 67 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~-----g~ev~~~~l~~~~--~~~~~~~~~~------~-~~~~~~~~~~~~l~~aD~ii~gs 67 (192)
+|||++|++.+++++++.. |+++++++|.+.. ++..|..|.+ | ..++......+++.+||+|||+|
T Consensus 13 ~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~s 92 (191)
T 1t0i_A 13 KRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVT 92 (191)
T ss_dssp SCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEEe
Confidence 4899999999999998731 6899999998642 2222211110 1 01111111358899999999999
Q ss_pred cccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEec
Q 029532 68 PTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVP 132 (192)
Q Consensus 68 P~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~ 132 (192)
|+||+++|++||+|||++. ..++||++++|++ |+.+ + ..++..++..+...|+.+++
T Consensus 93 P~y~~~~p~~lK~~iD~~~-----~~l~gK~~~~~~~-G~~~-~-~~~~~~l~~~l~~~G~~~~~ 149 (191)
T 1t0i_A 93 PQYNWGYPAALKNAIDRLY-----HEWHGKPALVVSY-GGHG-G-SKCNDQLQEVLHGLKMNVIG 149 (191)
T ss_dssp ECBTTBCCHHHHHHHHTCS-----TTTTTCEEEEEEE-ETTT-T-HHHHHHHHHHHHHTTCEEEE
T ss_pred ceECCCCCHHHHHHHHHHH-----hhcCCCEEEEEEe-CCcc-h-hhHHHHHHHHHHHCCCEEcc
Confidence 9999999999999999985 2589999998865 5543 3 35677889999999999987
No 33
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=99.78 E-value=1.3e-18 Score=131.23 Aligned_cols=131 Identities=16% Similarity=0.061 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHhccccCC--ceeEEEEcCCCCC--HHHhcc--cCCCCC-------CCCC--CCChhHhhhCCEEEEe
Q 029532 2 YGHVEKLAEEIKKGASSVEG--VEAKLWQVPETLP--EEVLGK--MSAPPK-------SDVP--IITPNELAEADGFVFG 66 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g--~ev~~~~l~~~~~--~~~~~~--~~~~~~-------~~~~--~~~~~~l~~aD~ii~g 66 (192)
+|||++|++.+++++++. | ++|++++|.+... +..|.. +..|.. |+.+ ....++|.+||+|||+
T Consensus 15 ~s~t~~la~~~~~~l~~~-g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~ 93 (201)
T 1t5b_A 15 YSQSGQLTDYFIEQWREK-HVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIA 93 (201)
T ss_dssp GCHHHHHHHHHHHHHHHH-CTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CChHHHHHHHHHHHHHHh-CCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 499999999999999873 4 8999999987531 211111 111111 1100 1125789999999999
Q ss_pred ccccCCCchHHHHHHHHhhccc-cc--------cCCCCCCcEEEEEecCCCCCC--hHHHHHHHHHHHHHcCCEEecC
Q 029532 67 FPTRFGMMAAQFKAFLDATGGL-WR--------TQQLAGKPAGMFYSTGSQGGG--QETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 67 sP~y~g~~~~~~k~fld~~~~~-~~--------~~~l~gK~~~~~~s~g~~~g~--~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
||+||+++|++||.|||++... |. ...++||++++|+++|+..++ .......++..+...|+.+++.
T Consensus 94 ~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~~l~~~G~~~~~~ 171 (201)
T 1t5b_A 94 APMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGFIGITDVNF 171 (201)
T ss_dssp CCCBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHHHHHHTTCCCEEE
T ss_pred eCcccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHHHHhhcCcceeEE
Confidence 9999999999999999999632 10 135899999999998875433 1224556777888899988763
No 34
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.78 E-value=7.7e-18 Score=124.04 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=108.9
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~~~~~k 79 (192)
++|||+++|+.|++++.+ . ++++++++.+. ...++.++|.||||+|+|+ |.+|+.++
T Consensus 10 ~tGnT~~vA~~ia~~l~~-~-~~v~~~~~~~~--------------------~~~~l~~~d~ii~g~pty~~g~~p~~~~ 67 (169)
T 1czn_A 10 QTGVTQTIAESIQQEFGG-E-SIVDLNDIANA--------------------DASDLNAYDYLIIGCPTWNVGELQSDWE 67 (169)
T ss_dssp SSSHHHHHHHHHHHHHTS-T-TTEEEEEGGGC--------------------CGGGGGGCSEEEEECCEETTTEECHHHH
T ss_pred CCcHHHHHHHHHHHHhCc-c-cceEEEEhhhC--------------------CHhHHhhCCEEEEEecccCCCcCCHHHH
Confidence 589999999999999976 3 57899998763 1368999999999999998 67999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCC-CC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccce
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQ-GG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGT 157 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~-~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
.|++++. ...++||++++|++++.. .+ ....++..+...|...|+.+++.....++.+.....+..+...|. .
T Consensus 68 ~f~~~l~----~~~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~gl-~ 142 (169)
T 1czn_A 68 GIYDDLD----SVNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPIEGYDFNESKAVRNNQFVGL-A 142 (169)
T ss_dssp HHGGGGG----GSCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSE-E
T ss_pred HHHHHhh----hhccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcceecchheeCCeeeee-e
Confidence 9999985 346899999999998663 33 244677889999999999998742111111111110111111121 1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029532 158 FAGDGSRQPTELELEQAFHQGKHIAGI 184 (192)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~~lg~~la~~ 184 (192)
+ ++ ..+++++.++++++++.+.+.
T Consensus 143 ~--~~-~~~~~~~~~~~~~w~~~~~~~ 166 (169)
T 1czn_A 143 I--DE-DNQPDLTKNRIKTWVSQLKSE 166 (169)
T ss_dssp E--CT-TTCGGGHHHHHHHHHHHHHHH
T ss_pred e--cC-CCccccCHHHHHHHHHHHHHH
Confidence 1 11 245677899999999888664
No 35
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=99.76 E-value=1.9e-17 Score=125.80 Aligned_cols=116 Identities=13% Similarity=0.058 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
.++|++|++++++++++ .|.+|++++|.+.+.-. ...++|.+||+|||+||+||+++|++||+|
T Consensus 29 ~s~~~~l~~~~~~~~~~-~g~~v~~~dL~~~~d~~---------------~~~~~l~~AD~iV~~~P~y~~s~pa~LK~~ 92 (204)
T 2amj_A 29 GQLNDTLTEVADGTLRD-LGHDVRIVRADSDYDVK---------------AEVQNFLWADVVIWQMPGWWMGAPWTVKKY 92 (204)
T ss_dssp CHHHHHHHHHHHHHHHH-TTCEEEEEESSSCCCHH---------------HHHHHHHHCSEEEEEEECBTTBCCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHH-cCCEEEEEeCCccccHH---------------HHHHHHHhCCEEEEECCccccCCCHHHHHH
Confidence 37999999999999998 49999999998632111 126899999999999999999999999999
Q ss_pred HHhhccc-cc-------------------cCCCCCCcEEEEEecCCCCC------------ChHHHHHHHHHHHHHcCCE
Q 029532 82 LDATGGL-WR-------------------TQQLAGKPAGMFYSTGSQGG------------GQETTALTAITQLVHHGMI 129 (192)
Q Consensus 82 ld~~~~~-~~-------------------~~~l~gK~~~~~~s~g~~~g------------~~~~~l~~~~~~l~~~g~~ 129 (192)
|||+... |. ...++||++.+++++|+..+ .....+..++..|...||.
T Consensus 93 iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~y~~~g~~~~~~~~~~~l~~l~~~l~~~G~~ 172 (204)
T 2amj_A 93 IDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGME 172 (204)
T ss_dssp HHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHHHHCTTSSSCSCCHHHHTHHHHHHHHHTTCE
T ss_pred HHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHHHccCcccccCCCHHHHHHHHHHHHHHcCCe
Confidence 9996421 21 13579999999999876421 1122333467778899999
Q ss_pred EecC
Q 029532 130 FVPI 133 (192)
Q Consensus 130 vv~~ 133 (192)
+++.
T Consensus 173 ~~~~ 176 (204)
T 2amj_A 173 PLPT 176 (204)
T ss_dssp ECCC
T ss_pred ecce
Confidence 8864
No 36
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.76 E-value=3.5e-17 Score=120.50 Aligned_cols=154 Identities=15% Similarity=0.177 Sum_probs=107.2
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~~~~~k 79 (192)
++|||+++|+.|++.+.+ . +++++++.+. ..+++.++|.||||+|+|+ |.+|+.++
T Consensus 11 ~tGnT~~vA~~ia~~l~~-~--~v~~~~~~~~--------------------~~~~l~~~d~ii~g~p~y~~g~~p~~~~ 67 (169)
T 1obo_A 11 QTGKTESVAEIIRDEFGN-D--VVTLHDVSQA--------------------EVTDLNDYQYLIIGCPTLNIGELQSDWE 67 (169)
T ss_dssp SSSHHHHHHHHHHHHHCT-T--TEEEEETTTC--------------------CGGGGGGCSEEEEEEEEETTTEECHHHH
T ss_pred CCchHHHHHHHHHHHhCc-C--CcEEEEcccC--------------------CHHHHhhCCEEEEEEeeCCCCcCCHHHH
Confidence 489999999999999976 2 7888988763 1368899999999999996 67888899
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCC-CC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccce
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQ-GG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGT 157 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~-~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
.|++++. ...++||++++|++++.. .+ ....++..+...|...|+.+++.....++.+.....+..+...|. .
T Consensus 68 ~fl~~l~----~~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~~l-~ 142 (169)
T 1obo_A 68 GLYSELD----DVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTDGYDFNDSKALRNGKFVGL-A 142 (169)
T ss_dssp HHHTTGG----GCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSE-E
T ss_pred HHHHHhh----hcCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeecCCCcccccchhhcCCceeeE-E
Confidence 9999985 246899999999998753 33 234677889999999999998752222221111110111111121 1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029532 158 FAGDGSRQPTELELEQAFHQGKHIAGIA 185 (192)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~~lg~~la~~~ 185 (192)
+ + ...+++.+.++++.+++.+.+.+
T Consensus 143 ~--~-~~~~~~~~~~~~~~w~~~~~~~l 167 (169)
T 1obo_A 143 L--D-EDNQSDLTDDRIKSWVAQLKSEF 167 (169)
T ss_dssp E--C-TTTCGGGHHHHHHHHHHHHHHHH
T ss_pred e--e-CCCccccCHHHHHHHHHHHHHHh
Confidence 1 1 11245678888999998887654
No 37
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=99.74 E-value=2.3e-17 Score=124.61 Aligned_cols=126 Identities=14% Similarity=0.149 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCC--CHHHhcccCC---C-CCCCCCCCChhHhhhCCEEEEeccccCCCch
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETL--PEEVLGKMSA---P-PKSDVPIITPNELAEADGFVFGFPTRFGMMA 75 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~--~~~~~~~~~~---~-~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~ 75 (192)
.++|.+|++++.+++ + .|.+|++++|.+.. |+..|..|.+ + ..++.. ...++|.+||+|||++|+||+++|
T Consensus 13 ~s~t~~l~~~~~~~~-~-~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~l~~AD~iV~~~P~y~~~~p 89 (196)
T 3lcm_A 13 TSFNAEILKQVQTNL-S-KEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEME-KYRDLVTWADHLIFIFPIWWSGMP 89 (196)
T ss_dssp TSHHHHHHHHHHHHS-C-TTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGH-HHHHHHHHCSEEEEEEECBTTBCC
T ss_pred CChHHHHHHHHHHHh-c-CCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHH-HHHHHHHhCCEEEEECchhhcccc
Confidence 578999999999999 6 58999999998864 3322221111 1 112221 236899999999999999999999
Q ss_pred HHHHHHHHhhccc---cc------cCCCCCCcEEEEEecCCC--C-----CChHHHHHHHHHHHHHcCCEEecC
Q 029532 76 AQFKAFLDATGGL---WR------TQQLAGKPAGMFYSTGSQ--G-----GGQETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 76 ~~~k~fld~~~~~---~~------~~~l~gK~~~~~~s~g~~--~-----g~~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
++||+|||++... +. ...++||++.+++|+|+. . +.. . ..++..|...|+..++.
T Consensus 90 a~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~--~-~~l~~~l~~~G~~~~~~ 160 (196)
T 3lcm_A 90 AILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYG--K-VLKKQILKPCAISPVKL 160 (196)
T ss_dssp HHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTT--H-HHHHHTTGGGTCCCEEE
T ss_pred HHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCH--H-HHHHHHHHhcCCceeeE
Confidence 9999999999532 11 136899999999998875 1 111 1 45666677888887653
No 38
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=99.73 E-value=2.3e-17 Score=121.55 Aligned_cols=136 Identities=11% Similarity=-0.015 Sum_probs=105.3
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~k 79 (192)
++|||+++|+.|++++.+ .|++++++++.+. ...++.++|.||||+||| +|.+|..++
T Consensus 19 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~~--------------------~~~~l~~~d~ii~g~pt~g~G~~p~~~~ 77 (167)
T 1ykg_A 19 QTGNARRVAEALRDDLLA-AKLNVKLVNAGDY--------------------KFKQIASEKLLIVVTSTQGEGEPPEEAV 77 (167)
T ss_dssp SSSHHHHHHHHHHHHHHH-HTCCCEEEEGGGC--------------------CGGGGGGCSEEEEEEECBGGGBCCGGGH
T ss_pred CchHHHHHHHHHHHHHHH-CCCceEEeehhhC--------------------CHHHhccCCeEEEEEcccCCCcCChhHH
Confidence 589999999999999987 4889999998753 236788999999999999 789999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceec
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
.|++.+.... ...+++|++++|++++..++....+...+...|...|+.++.....
T Consensus 78 ~f~~~l~~~~-~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~~~~~----------------------- 133 (167)
T 1ykg_A 78 ALHKFLFSKK-APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVD----------------------- 133 (167)
T ss_dssp HHHHHHTSTT-CCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESSCCEE-----------------------
T ss_pred HHHHHHHhcc-ccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEeeccee-----------------------
Confidence 9999985210 1358899999999754433333456778888899999988764321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 160 GDGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 160 ~~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
.|+++.+.++++++++++.++.
T Consensus 134 ------~d~~~~~~~~~w~~~l~~~l~~ 155 (167)
T 1ykg_A 134 ------ADVEYQAAASEWRARVVDALKS 155 (167)
T ss_dssp ------ECTTCHHHHHHHHHHHHHHHHT
T ss_pred ------cCCCcHHHHHHHHHHHHHHHHh
Confidence 1234677888899888887754
No 39
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=99.73 E-value=5.7e-17 Score=120.65 Aligned_cols=154 Identities=19% Similarity=0.138 Sum_probs=110.2
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCch----
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMMA---- 75 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~~---- 75 (192)
++|||+++|+.|++++.. +++++++++.+. ...++.++|.||||+|||+ |.+|
T Consensus 10 ~tGnT~~iA~~ia~~l~~--~~~v~~~~~~~~--------------------~~~~l~~~d~iilg~pt~~~G~~pg~~~ 67 (179)
T 1yob_A 10 NTGKTRKVAKSIKKRFDD--ETMSDALNVNRV--------------------SAEDFAQYQFLILGTPTLGEGELPGLSS 67 (179)
T ss_dssp SSSHHHHHHHHHHTTSCT--TTBCCCEEGGGC--------------------CHHHHHTCSEEEEEEECBTTTBCSSGGG
T ss_pred CCcHHHHHHHHHHHHhCC--CCceEEEEhhhC--------------------CHHHHhcCCEEEEEeccCCCCcCCcccc
Confidence 589999999999999965 466788887652 2478999999999999999 8999
Q ss_pred ----HHHHHHHHhhccccccCCCCCCcEEEEEecCCC-CC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccC
Q 029532 76 ----AQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQ-GG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 149 (192)
Q Consensus 76 ----~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~-~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~ 149 (192)
..++.|++++. ...++||++++|++++.. .+ ....++..+...|...|+.+++.....++.|.....+..
T Consensus 68 ~~~~~~~~~fl~~l~----~~~l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~ 143 (179)
T 1yob_A 68 DAENESWEEFLPKIE----GLDFSGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGAKIVGSWSTDGYEFESSEAVVD 143 (179)
T ss_dssp TCSSCCHHHHHHHHT----TCCCTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCEEECCBCCTTCCCSCCTTBSS
T ss_pred cccchHHHHHHHHhh----hcccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeeccCCCCcccchhhhc
Confidence 89999999985 236899999999997543 22 234567788888989999999865444444433333333
Q ss_pred CCCCccceecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029532 150 GSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAGI 184 (192)
Q Consensus 150 ~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~~ 184 (192)
+.+.|. .+ +. ..+++.+.++++...+.+.+.
T Consensus 144 ~~f~gl-~~--d~-~~~~~~~~~~i~~w~~~l~~~ 174 (179)
T 1yob_A 144 GKFVGL-AL--DL-DNQSGKTDERVAAWLAQIAPE 174 (179)
T ss_dssp SSBSSE-EE--CT-TTCGGGHHHHHHHHHHHHGGG
T ss_pred Cceecc-cc--CC-CCCCcccHHHHHHHHHHHHHH
Confidence 232332 11 11 123456788888888777543
No 40
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=99.72 E-value=1e-16 Score=122.34 Aligned_cols=132 Identities=20% Similarity=0.140 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHhcccc-CCceeEEEEcCCCC-C-HHH--hcccCCCCCCCC----------CCCChhHhhhCCEEEEe
Q 029532 2 YGHVEKLAEEIKKGASSV-EGVEAKLWQVPETL-P-EEV--LGKMSAPPKSDV----------PIITPNELAEADGFVFG 66 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~-~g~ev~~~~l~~~~-~-~~~--~~~~~~~~~~~~----------~~~~~~~l~~aD~ii~g 66 (192)
.++|.+|++.+.+++++. .|.+|+++||.+.. | +.. +.+..+.+.+.. .....++|.+||+|||+
T Consensus 15 ~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~ 94 (212)
T 3r6w_A 15 RSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVIS 94 (212)
T ss_dssp TCHHHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 478999999999999872 28899999998763 2 111 111111011000 11135789999999999
Q ss_pred ccccCCCchHHHHHHHHhhcccc-----c--------cCCCCCCcEEEEEecCC--CCC-Ch----HHHHHHHHHHHHHc
Q 029532 67 FPTRFGMMAAQFKAFLDATGGLW-----R--------TQQLAGKPAGMFYSTGS--QGG-GQ----ETTALTAITQLVHH 126 (192)
Q Consensus 67 sP~y~g~~~~~~k~fld~~~~~~-----~--------~~~l~gK~~~~~~s~g~--~~g-~~----~~~l~~~~~~l~~~ 126 (192)
||+||+++|++||+|||++.... . ...++||++.+++++|. ..+ +. ......++..|...
T Consensus 95 ~P~y~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~~~l~~~l~~~ 174 (212)
T 3r6w_A 95 TPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFI 174 (212)
T ss_dssp EECBTTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGGGCCSHHHHHHHHHHH
T ss_pred cCcccccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCchhhhHHHHHHHHHHC
Confidence 99999999999999999995320 0 23689999999999873 211 11 12234677778888
Q ss_pred CCEEecC
Q 029532 127 GMIFVPI 133 (192)
Q Consensus 127 g~~vv~~ 133 (192)
|+..++.
T Consensus 175 G~~~~~~ 181 (212)
T 3r6w_A 175 GIDEVTV 181 (212)
T ss_dssp TCCEEEE
T ss_pred CCceeEE
Confidence 9988853
No 41
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=99.72 E-value=1.6e-17 Score=131.59 Aligned_cols=130 Identities=16% Similarity=0.113 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCC--CHHHhcccCC--------------------CC-CCCCCCCChhHhh
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETL--PEEVLGKMSA--------------------PP-KSDVPIITPNELA 58 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~--~~~~~~~~~~--------------------~~-~~~~~~~~~~~l~ 58 (192)
.|+|.+|++.+.+++++ .|.+|++++|.+.. ||.-|..|.. |. .+++. ...++|.
T Consensus 15 ~s~t~~la~~~~~~l~~-~g~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~-~~~~~l~ 92 (273)
T 1d4a_A 15 TSFNYAMKEAAAAALKK-KGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIV-AEQKKLE 92 (273)
T ss_dssp TSHHHHHHHHHHHHHHH-TTCEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTCBCHHHH-HHHHHHH
T ss_pred ccHHHHHHHHHHHHHHh-CCCeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhcccCcHHHH-HHHHHHH
Confidence 47999999999999988 59999999999864 4333332221 00 11111 1256799
Q ss_pred hCCEEEEeccccCCCchHHHHHHHHhhccccc---------cCCCCCCcEEEEEecCCCC-----CCh----HHHHHHHH
Q 029532 59 EADGFVFGFPTRFGMMAAQFKAFLDATGGLWR---------TQQLAGKPAGMFYSTGSQG-----GGQ----ETTALTAI 120 (192)
Q Consensus 59 ~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~---------~~~l~gK~~~~~~s~g~~~-----g~~----~~~l~~~~ 120 (192)
+||+|||++|+||+++|++||.|||++..... ...++||++.+++++|+.. ++. ...+..+.
T Consensus 93 ~AD~IV~~~P~y~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~~~~y~~~g~~~~~~~~~~~~~ 172 (273)
T 1d4a_A 93 AADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQ 172 (273)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSCTGGGSTTBTTCCHHHHHHHHH
T ss_pred hCCEEEEECchhhccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCChHHhcccccCCCHHHHHHHHH
Confidence 99999999999999999999999999864311 2468999999999987651 111 11222222
Q ss_pred -HHHHHcCCEEecC
Q 029532 121 -TQLVHHGMIFVPI 133 (192)
Q Consensus 121 -~~l~~~g~~vv~~ 133 (192)
..|...|+.+++.
T Consensus 173 ~~~l~~~G~~~~~~ 186 (273)
T 1d4a_A 173 SGILHFCGFQVLEP 186 (273)
T ss_dssp TTTTGGGTCEECCC
T ss_pred HHHHHhCCCeeeeE
Confidence 3456778888753
No 42
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=99.71 E-value=1.4e-16 Score=117.87 Aligned_cols=154 Identities=15% Similarity=0.111 Sum_probs=106.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCc----h
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMM----A 75 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~----~ 75 (192)
++|||+++|+.|++.+.+ . +++++++.+.. ...++.++|.||||+|||+ |.+ |
T Consensus 9 ~tGnT~~vA~~ia~~l~~-~--~~~~~~~~~~~-------------------~~~~l~~~d~ii~g~pt~~~G~~~~~~p 66 (173)
T 2fcr_A 9 STGNTTEVADFIGKTLGA-K--ADAPIDVDDVT-------------------DPQALKDYDLLFLGAPTWNTGADTERSG 66 (173)
T ss_dssp SSSHHHHHHHHHHHHHGG-G--BCCCEEGGGCS-------------------CGGGGGGCSEEEEEEECCSTTCSSCCSC
T ss_pred CCchHHHHHHHHHHHhcc-C--CcEEEehhhcC-------------------ChhHHccCCEEEEEEeecCCCCcCccCc
Confidence 589999999999999976 2 56777776520 1367899999999999999 899 8
Q ss_pred HHHHHHH-HhhccccccCCCCCCcEEEEEecCCC-CC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCC
Q 029532 76 AQFKAFL-DATGGLWRTQQLAGKPAGMFYSTGSQ-GG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSP 152 (192)
Q Consensus 76 ~~~k~fl-d~~~~~~~~~~l~gK~~~~~~s~g~~-~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~ 152 (192)
..++.|+ +++. ...++||++++|++++.. .+ ....++..+...|...|+.+++.....++.+.....+..+..
T Consensus 67 ~~~~~fl~~~l~----~~~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~~ 142 (173)
T 2fcr_A 67 TSWDEFLYDKLP----EVDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPVGFSNPDDYDYEESKSVRDGKF 142 (173)
T ss_dssp STHHHHHHHTGG----GCCCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEECCBCGGGSCCSCCTTEETTEE
T ss_pred HHHHHHHHhhcc----ccccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEeecccCCcccccchhhhCCee
Confidence 9999999 9885 346899999999997643 11 223556788888999999999754343333332222222222
Q ss_pred CccceecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029532 153 YGAGTFAGDGSRQPTELELEQAFHQGKHIAGI 184 (192)
Q Consensus 153 ~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~~ 184 (192)
.|. .+.. ..+++.+.++++++.+.+.+.
T Consensus 143 ~~l-~~~~---~~~~~~~~~~i~~w~~~i~~~ 170 (173)
T 2fcr_A 143 LGL-PLDM---VNDQIPMEKRVAGWVEAVVSE 170 (173)
T ss_dssp SSE-EEET---TTCSSCHHHHHHHHHHHHHHH
T ss_pred eee-eecC---CCCccccHHHHHHHHHHHHHH
Confidence 222 1111 112345677888888777654
No 43
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=99.71 E-value=4.1e-16 Score=115.60 Aligned_cols=155 Identities=18% Similarity=0.205 Sum_probs=108.1
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~k 79 (192)
++|||+++|+.|++.+.. . +++++++.+. ...++.++|.||||+||| .|.+|+.++
T Consensus 10 ~tGnT~~iA~~Ia~~l~~-~--~v~i~~~~~~--------------------~~~~l~~~d~ii~g~pt~~~G~~p~~~~ 66 (175)
T 1ag9_A 10 DTGNTENIAKMIQKQLGK-D--VADVHDIAKS--------------------SKEDLEAYDILLLGIPTWYYGEAQCDWD 66 (175)
T ss_dssp SSSHHHHHHHHHHHHHCT-T--TEEEEEGGGC--------------------CHHHHHTCSEEEEECCEETTTEECHHHH
T ss_pred CCchHHHHHHHHHHHhcc-C--ceEEEEcccC--------------------ChhHhhhCCEEEEEEeecCCCcChHHHH
Confidence 589999999999999975 2 6788887652 247899999999999997 588999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCC-C-ChHHHHHHHHHHHHHcCCEEecCCccCCCCcccccccc-CCCCCccc
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQG-G-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVK-GGSPYGAG 156 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~-g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~-~~~~~g~~ 156 (192)
.|++.+. ...++||++++|++++..+ + ....++..+...|...|+.+++.....++.|.....+. .+...|.
T Consensus 67 ~f~~~l~----~~~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~s~~~~~~~~~~gl- 141 (175)
T 1ag9_A 67 DFFPTLE----EIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGL- 141 (175)
T ss_dssp HHHHHHT----TCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCEECTTCCCSCCSCEEETTEESSE-
T ss_pred HHHhhhh----hcccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcccccchheeeCCeEEee-
Confidence 9999986 2368999999999965431 1 12366788999999999999975322332222111111 0111111
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029532 157 TFAGDGSRQPTELELEQAFHQGKHIAGIAK 186 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~~~~~~lg~~la~~~~ 186 (192)
.. + ...+++.+.++++++++.|.+.+.
T Consensus 142 ~~--~-~~~~~~~~~~~i~~w~~~i~~~~~ 168 (175)
T 1ag9_A 142 AI--D-EDRQPELTAERVEKWVKQISEELH 168 (175)
T ss_dssp EE--C-TTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred ec--C-CCCcccccHHHHHHHHHHHHHHhh
Confidence 11 1 124567788999999998877653
No 44
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=99.70 E-value=1.9e-17 Score=126.51 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHhcccc-CCceeEEEEcCCCC-C---HHHhccc-----CCCCCC------CCCCCChhHhhhCCEEEE
Q 029532 2 YGHVEKLAEEIKKGASSV-EGVEAKLWQVPETL-P---EEVLGKM-----SAPPKS------DVPIITPNELAEADGFVF 65 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~-~g~ev~~~~l~~~~-~---~~~~~~~-----~~~~~~------~~~~~~~~~l~~aD~ii~ 65 (192)
.++|.+|++.+.+++++. .|++|+++||.+.. | ++.|.+. +.+... +......++|.+||+|||
T Consensus 19 ~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~iv~ 98 (211)
T 3p0r_A 19 QAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVF 98 (211)
T ss_dssp TCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHhhhccCccccCCHHHHhhHHHHHHHHHHHHhCCEEEE
Confidence 589999999999999872 27899999998753 3 2222211 111110 111123688999999999
Q ss_pred eccccCCCchHHHHHHHHhhcccc---------ccCCCCCCcEEEEEecCCCCCCh-----HHHHHHHHHHHHHcCCEEe
Q 029532 66 GFPTRFGMMAAQFKAFLDATGGLW---------RTQQLAGKPAGMFYSTGSQGGGQ-----ETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 66 gsP~y~g~~~~~~k~fld~~~~~~---------~~~~l~gK~~~~~~s~g~~~g~~-----~~~l~~~~~~l~~~g~~vv 131 (192)
++|+||+++|++||+|||++.... ....++||++.+++++|+..++. ......++..|...|+..+
T Consensus 99 ~~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~l~~~l~~~G~~~v 178 (211)
T 3p0r_A 99 GFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNM 178 (211)
T ss_dssp EEECBTTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBSHHHHHHHHHHTTCCSC
T ss_pred EcChhcccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHHHHHHHHHHHhCCCCee
Confidence 999999999999999999986321 02358999999999987764321 1223567777888899876
Q ss_pred cC
Q 029532 132 PI 133 (192)
Q Consensus 132 ~~ 133 (192)
..
T Consensus 179 ~~ 180 (211)
T 3p0r_A 179 ET 180 (211)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 45
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=99.70 E-value=8.2e-17 Score=120.06 Aligned_cols=156 Identities=21% Similarity=0.163 Sum_probs=108.3
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCch----
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMMA---- 75 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~~---- 75 (192)
++|||+++|+.|++.+.+ . ++++++++.+. ...++.++|.||||+|||+ |.+|
T Consensus 11 ~tGnT~~iA~~ia~~l~~-~-~~v~~~~~~~~--------------------~~~~l~~~d~ii~g~pty~~G~~pg~~~ 68 (182)
T 2wc1_A 11 DTGTTRKIAKQIKDMFDD-E-VMAKPLNVNRA--------------------DVADFMAYDFLILGTPTLGDGQLPGLSA 68 (182)
T ss_dssp SSSHHHHHHHHHHTTSCT-T-TBCCCEEGGGC--------------------CHHHHHHCSEEEEEEECBTTTBCSSGGG
T ss_pred CCchHHHHHHHHHHHhcc-c-CceEEEEcccC--------------------CHHHHhhCCeEEEEEeeCCCCCCCcccc
Confidence 489999999999999976 3 67788887653 2478999999999999999 8888
Q ss_pred ----HHHHHHHHhhccccccCCCCCCcEEEEEecCCC-CC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccC
Q 029532 76 ----AQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQ-GG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 149 (192)
Q Consensus 76 ----~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~-~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~ 149 (192)
+.++.|++++. ...++||++++|++++.. .+ ....+...+...|...|+.+++.....++.+.....+..
T Consensus 69 ~~~~~~~~~f~~~l~----~~~l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~~~~~~~ 144 (182)
T 2wc1_A 69 NAASESWEEFLPRIA----DQDFSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGANVVGRWPAKGYGFEDSLAVVE 144 (182)
T ss_dssp TCSSCCHHHHGGGGT----TCCCTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCEEECCEECTTSCCSCCTTEET
T ss_pred ccchhHHHHHHHHhh----hccCCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCEEEEeecCCCcCcccchhhhc
Confidence 88999999986 246899999999997643 22 223556788888999999999864444433322222211
Q ss_pred CCCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029532 150 GSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAGIAK 186 (192)
Q Consensus 150 ~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~~~~ 186 (192)
+...|.. . +.. ..++.+.++++...+.|.+.+.
T Consensus 145 ~~~~gl~-~--d~~-~~~~~~~~~~~~w~~~l~~~l~ 177 (182)
T 2wc1_A 145 GEFLGLA-L--DQD-NQAALTPERLKGWLSLIAADFG 177 (182)
T ss_dssp TEESSEE-E--CTT-TCGGGHHHHHHHHHHHTHHHHT
T ss_pred Cceeeee-c--cCC-CCccccHHHHHHHHHHHHHHHh
Confidence 1122220 1 111 1223467888888888876654
No 46
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=99.69 E-value=8.3e-18 Score=121.27 Aligned_cols=131 Identities=13% Similarity=0.085 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~k 79 (192)
++|||+++|+.|++.+.+ .|+++++++..+ ..++.++|.||||+||| +|.+|+.++
T Consensus 11 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~----------------------~~~l~~~d~vi~g~pt~g~g~~p~~~~ 67 (147)
T 2hna_A 11 TLGGAEYVAEHLAEKLEE-AGFTTETLHGPL----------------------LEDLPASGIWLVISSTHGAGDIPDNLS 67 (147)
T ss_dssp TSCCCHHHHHHHHHHHHH-TTCCEEEECCTT----------------------SCSSCSEEEEEEECCTTTTCCTTSSCH
T ss_pred CchHHHHHHHHHHHHHHH-CCCceEEecCCC----------------------HHHcccCCeEEEEECccCCCCCChhHH
Confidence 589999999999999988 588888876432 25677899999999999 899999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEe----cCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcc
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYS----TGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGA 155 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s----~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~ 155 (192)
.|++.+... ...+++|++++|++ ++|..... ..+...|...|+.++.....+
T Consensus 68 ~f~~~l~~~--~~~l~~~~~avfg~G~~~y~~~~~a~----~~l~~~l~~~G~~~~~~~~~~------------------ 123 (147)
T 2hna_A 68 PFYEALQEQ--KPDLSAVRFGAIGIGSREYDTFCGAI----DKLEAELKNSGAKQTGETLKI------------------ 123 (147)
T ss_dssp HHHHHHHHH--CCCTTEEEEEEESCCHHHHSCSSSCT----THHHHHHHHHTCEECSSCBCC------------------
T ss_pred HHHHHHHhh--ccccCCCEEEEEecccCCHHHHHHHH----HHHHHHHHHcCCeEeeeeEEE------------------
Confidence 999998521 12578999999994 44433333 367788888999988765432
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029532 156 GTFAGDGSRQPTELELEQAFHQGKHIAGIA 185 (192)
Q Consensus 156 ~~~~~~~~~~p~~~~~~~~~~lg~~la~~~ 185 (192)
+..|++++.+.++++++.+++.+
T Consensus 124 -------d~~~~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 124 -------NILDHDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp -------CCSSCCSSCSCCHHHHHHHHHHH
T ss_pred -------ecCCCCCcHHHHHHHHHHHHHHh
Confidence 12344556677777777777653
No 47
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=99.68 E-value=8.2e-17 Score=124.29 Aligned_cols=105 Identities=20% Similarity=0.179 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCC--CHHHhcc---cCC------------------CCCCCCCCCChhHhh
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETL--PEEVLGK---MSA------------------PPKSDVPIITPNELA 58 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~--~~~~~~~---~~~------------------~~~~~~~~~~~~~l~ 58 (192)
.++|.+|++.+.+++++ .|++|+++||.+.. |+..|.. |.. ...+++.. ..++|.
T Consensus 14 ~S~t~~l~~~~~~~l~~-~g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd~~~-~~~~l~ 91 (228)
T 3tem_A 14 KSFNGSLKNVAVDELSR-QGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITD-EQKKVR 91 (228)
T ss_dssp TSHHHHHHHHHHHHHHH-HTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHHHHH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHHH-CCCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHHHHH-HHHHHH
Confidence 57899999999999988 49999999999864 3322211 110 11122211 367899
Q ss_pred hCCEEEEeccccCCCchHHHHHHHHhhcccc---------ccCCCCCCcEEEEEecCCC
Q 029532 59 EADGFVFGFPTRFGMMAAQFKAFLDATGGLW---------RTQQLAGKPAGMFYSTGSQ 108 (192)
Q Consensus 59 ~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~---------~~~~l~gK~~~~~~s~g~~ 108 (192)
+||+|||++|+||+++|+.||.|||++.... ....|+||++.+++|+|+.
T Consensus 92 ~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~ 150 (228)
T 3tem_A 92 EADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGT 150 (228)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSC
T ss_pred hCCEEEEECChhhcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999999985321 1246899999999988764
No 48
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=99.68 E-value=2.7e-16 Score=118.28 Aligned_cols=116 Identities=15% Similarity=0.194 Sum_probs=87.3
Q ss_pred HHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhhc
Q 029532 7 KLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~ 86 (192)
++++++++++++ .|.+|++++|.+..+. ..+|+. ...++|.+||+|||++|+||+++|++||.||||+.
T Consensus 17 ~l~~~l~~~~~~-~g~ev~~~dL~~~~~~---------~~~dv~-~~~~~l~~AD~iv~~~P~y~~~~pa~lK~~iDrv~ 85 (192)
T 3f2v_A 17 TVHKHWSDAVRQ-HTDRFTVHELYAVYPQ---------GKIDVA-AEQKLIETHDSLVWQFPIYWFNCPPLLKQWLDEVL 85 (192)
T ss_dssp SHHHHHHHHHTT-CTTTEEEEEHHHHCTT---------CCCCHH-HHHHHHHTSSSEEEEEECBTTBCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHh-CCCeEEEEEchhcCCC---------CchhHH-HHHHHHHhCCEEEEEcChhhcCCCHHHHHHHHHHh
Confidence 688899999988 5889999999875331 011211 13689999999999999999999999999999986
Q ss_pred cc-cc----cCCCCCCcEEEEEecCCCC-----C-----ChHHHHHHHHHHHHHcCCEEecC
Q 029532 87 GL-WR----TQQLAGKPAGMFYSTGSQG-----G-----GQETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 87 ~~-~~----~~~l~gK~~~~~~s~g~~~-----g-----~~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
.. |. ...++||++.+++|+|+.. + ..+..+..++..+...||..++.
T Consensus 86 ~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l~pl~~~~~f~G~~~~~~ 147 (192)
T 3f2v_A 86 TYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVLRPFELTAKYCNADYRPP 147 (192)
T ss_dssp CBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHHHHHHHHHHHTTCEECCC
T ss_pred hcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHHHHHHHHHHhCCCeEeee
Confidence 42 21 1468999999999988651 1 12334445677788999999874
No 49
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=99.68 E-value=1.5e-15 Score=116.89 Aligned_cols=161 Identities=11% Similarity=0.056 Sum_probs=107.5
Q ss_pred CCHHHHHHHHHHHhcccc-CCc-eeEEEEcCCCCC--H--HHhccc-----CCCCCC------CCCCCChhHhhhCCEEE
Q 029532 2 YGHVEKLAEEIKKGASSV-EGV-EAKLWQVPETLP--E--EVLGKM-----SAPPKS------DVPIITPNELAEADGFV 64 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~-~g~-ev~~~~l~~~~~--~--~~~~~~-----~~~~~~------~~~~~~~~~l~~aD~ii 64 (192)
.++|.+|++.+.++++++ .|. +|+++||.+... + +++.+. .....+ +......++|.+||+||
T Consensus 20 ~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~aD~iv 99 (223)
T 3u7i_A 20 SSVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVLSAWEKQGNGQELTREEQKVTERMSEILQQFKSANTYV 99 (223)
T ss_dssp TSHHHHHHHHHHHHHHHHCCSSCEEEEEETTTSCCCCCCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHCSEEE
T ss_pred CChHHHHHHHHHHHHHHhCCCCCeEEEEECcCCCCCCCCHHHHHHhhccccccccCHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 589999999999999873 267 999999987632 1 111110 011010 00111368999999999
Q ss_pred EeccccCCCchHHHHHHHHhhccc---cc------cCCC-CCCcEEEEEecCCCCCC--h----HHHHHHHHHHHHHcCC
Q 029532 65 FGFPTRFGMMAAQFKAFLDATGGL---WR------TQQL-AGKPAGMFYSTGSQGGG--Q----ETTALTAITQLVHHGM 128 (192)
Q Consensus 65 ~gsP~y~g~~~~~~k~fld~~~~~---~~------~~~l-~gK~~~~~~s~g~~~g~--~----~~~l~~~~~~l~~~g~ 128 (192)
|++|+||+++|++||+|||++... |. ...+ +||++.+++++|+..++ . ......++..|...|+
T Consensus 100 ~~~P~y~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~~~~~~~~~l~~~l~~~G~ 179 (223)
T 3u7i_A 100 IVLPLHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMFNFLGI 179 (223)
T ss_dssp EEEECBTTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHHHTCHHHHHHHHHHHHHTC
T ss_pred EEcChhhccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccchHHHHHHHHHHHHHHCCC
Confidence 999999999999999999998643 11 1246 89999999998876432 1 1234567778888999
Q ss_pred EEecCCccCCCCccccccccCCCCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029532 129 IFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAGIA 185 (192)
Q Consensus 129 ~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~~~ 185 (192)
..+..-... | . ...+.++.++++++-++.+++..
T Consensus 180 ~~~~~i~~~------------g----~-------~~~~~~~~~~~a~~~~~~~~~~f 213 (223)
T 3u7i_A 180 EDYQIVRAQ------------G----T-------AVLDPTEVLQNAYKEVEEAASRL 213 (223)
T ss_dssp CEEEEEEEC------------C----T-------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEc------------C----c-------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 888632211 0 0 11245667777777777766654
No 50
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=99.66 E-value=1.7e-15 Score=110.99 Aligned_cols=116 Identities=17% Similarity=0.220 Sum_probs=77.2
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCH---HHhcccCCC---CCC--CCCCC--ChhHhhhCCEEEEecccc
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPE---EVLGKMSAP---PKS--DVPII--TPNELAEADGFVFGFPTR 70 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~---~~~~~~~~~---~~~--~~~~~--~~~~l~~aD~ii~gsP~y 70 (192)
++|||+++|+.|++.+.. ++..+.....++. +.+..+..+ ..+ ..|.. ...++.++|.||||+|+|
T Consensus 14 ~tG~T~~vA~~Ia~~l~~----~~~~i~~~~~y~~~~l~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~yd~iilG~P~~ 89 (162)
T 3klb_A 14 CSGVTKAVAEKLAAITGA----DLYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKYEVLFVGFPVW 89 (162)
T ss_dssp SSSHHHHHHHHHHHHHTC----EEEECCBSSCCCTGGGCTTCTTSHHHHHHTCTTCCCCBSCCCSCGGGCSEEEEEEECB
T ss_pred CCchHHHHHHHHHHHhCC----CeEEEEeCCcCCccccchhhHHHHHHHHHhccccCccccccccChhhCCEEEEEcccc
Confidence 589999999999999832 3322221111221 111000000 001 12221 246899999999999999
Q ss_pred CCCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 71 FGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 71 ~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
++++|++|+.||+++ .++||++++|+++||++ ...++..+...+. +..++
T Consensus 90 ~g~~~~~~~~fl~~~-------~l~gk~v~~f~t~g~~~--~g~~~~~l~~~l~--~~~~~ 139 (162)
T 3klb_A 90 WYIAPTIINTFLESY-------DFAGKIVVPFATSGGSG--IGNCEKNLHKAYP--DIVWK 139 (162)
T ss_dssp TTBCCHHHHHHHHTS-------CCTTCEEEEEEECSSCC--SHHHHHHHHHHCT--TSEEC
T ss_pred cCCCCHHHHHHHHhc-------CCCCCEEEEEEEeCCCC--ccHHHHHHHHHcC--CCEee
Confidence 999999999999986 58999999999999864 3456677877664 56655
No 51
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=99.66 E-value=2.1e-15 Score=115.28 Aligned_cols=115 Identities=15% Similarity=0.065 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl 82 (192)
++|.+|++++.+.+++ .|++|++++|.+...-. ...+++.+||+|||++|+||+++|++||.||
T Consensus 43 s~n~~L~~~~~~~l~~-~g~ev~~~dL~~~~Dv~---------------~~~~~l~~aD~iv~~~P~y~~~~p~~lK~~i 106 (218)
T 3rpe_A 43 ALNLTLTNVAADFLRE-SGHQVKITTVDQGYDIE---------------SEIENYLWADTIIYQMPAWWMGEPWILKKYI 106 (218)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCEEEEEGGGCCCHH---------------HHHHHHHHCSEEEEEEECBTTBCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhh-CCCEEEEEECCCccCHH---------------HHHHHHHhCCEEEEECChHhccCCHHHHHHH
Confidence 5789999999999988 69999999997632111 1258999999999999999999999999999
Q ss_pred Hhhccc-cc-------------------cCCCCCCcEEEEEecCCCC-----C-----C--hHHHHHHHHHHHHHcCCEE
Q 029532 83 DATGGL-WR-------------------TQQLAGKPAGMFYSTGSQG-----G-----G--QETTALTAITQLVHHGMIF 130 (192)
Q Consensus 83 d~~~~~-~~-------------------~~~l~gK~~~~~~s~g~~~-----g-----~--~~~~l~~~~~~l~~~g~~v 130 (192)
|++... |. ...++||++.+++|+|.+. + + .+..+..++..+...||..
T Consensus 107 D~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~y~~~g~~~~g~~~~~~l~p~~~~l~f~G~~~ 186 (218)
T 3rpe_A 107 DEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKP 186 (218)
T ss_dssp HHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHHHHCTTSTTTTCHHHHHTHHHHHHHHHTTCEE
T ss_pred HHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHhhcccccccccCCHHHHHHHHHHHHHhCCCEE
Confidence 998422 11 1357999999999988752 1 1 1122334577788999999
Q ss_pred ecC
Q 029532 131 VPI 133 (192)
Q Consensus 131 v~~ 133 (192)
++.
T Consensus 187 l~~ 189 (218)
T 3rpe_A 187 LPT 189 (218)
T ss_dssp CCC
T ss_pred ece
Confidence 864
No 52
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=99.64 E-value=5.2e-16 Score=116.67 Aligned_cols=135 Identities=13% Similarity=0.055 Sum_probs=102.1
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
++|||+++|+.|++.+.+ .|++++++++.+. ..++.++|.|||++|||+|.+|..++.
T Consensus 31 ~tGnTe~~A~~ia~~l~~-~g~~v~v~~l~~~---------------------~~~l~~~d~vi~g~~Ty~G~~p~~~~~ 88 (191)
T 1bvy_F 31 NMGTAEGTARDLADIAMS-KGFAPQVATLDSH---------------------AGNLPREGAVLIVTASYNGHPPDNAKQ 88 (191)
T ss_dssp SSSHHHHHHHHHHHHHHT-TTCCCEEEEGGGS---------------------TTCCCSSSEEEEEECCBTTBCCTTTHH
T ss_pred CChHHHHHHHHHHHHHHh-CCCceEEeeHHHh---------------------hhhhhhCCeEEEEEeecCCCcCHHHHH
Confidence 689999999999999988 5899999998762 136778999999999999999999999
Q ss_pred HHHhhccccccCCCCCCcEEEEEecCCCCC-ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccceec
Q 029532 81 FLDATGGLWRTQQLAGKPAGMFYSTGSQGG-GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~s~g~~~g-~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|++.+.... ...++||++++|+++....+ ....+...+...|...|+.++.+...+
T Consensus 89 fl~~L~~~~-~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~~~~~~---------------------- 145 (191)
T 1bvy_F 89 FVDWLDQAS-ADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEA---------------------- 145 (191)
T ss_dssp HHHHHHTCC-SSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEE----------------------
T ss_pred HHHHHHhcc-chhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEeeccEEE----------------------
Confidence 999985321 12488999999997633332 122456688888999998887643211
Q ss_pred CCCCCCCCHHHHHH-HHHHHHHHHHHHH
Q 029532 160 GDGSRQPTELELEQ-AFHQGKHIAGIAK 186 (192)
Q Consensus 160 ~~~~~~p~~~~~~~-~~~lg~~la~~~~ 186 (192)
.. +++++. ++++++.|++.++
T Consensus 146 ---d~---~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 146 ---DA---SDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp ---ET---TSCHHHHHHHHHHHHHHHHH
T ss_pred ---ec---CCChHHHHHHHHHHHHHHhc
Confidence 11 235555 8888888887765
No 53
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=99.60 E-value=6e-15 Score=108.05 Aligned_cols=148 Identities=19% Similarity=0.205 Sum_probs=95.8
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~~~~~k 79 (192)
++|||+++|+.|++.+ |. ++++++.+. ...++.++|.||||+|||+ |.+|..++
T Consensus 11 ~tGnT~~~A~~ia~~l----g~-~~~~~~~~~--------------------~~~~l~~~d~ii~g~pt~~~g~~p~~~~ 65 (164)
T 2bmv_A 11 DSGNAEAIAEKISKAI----GN-AEVVDVAKA--------------------SKEQFNSFTKVILVAPTAGAGDLQTDWE 65 (164)
T ss_dssp SSSHHHHHHHHHHHHH----CS-EEEEEGGGC--------------------CHHHHTTCSEEEEEEEEETTTEECHHHH
T ss_pred CCchHHHHHHHHHHHc----CC-cEEEecccC--------------------CHhHHhhCCEEEEEECCcCCCcCcHHHH
Confidence 5899999999999998 44 888888753 2467889999999999997 67888899
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCC-CCC-hHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccce
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQ-GGG-QETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGT 157 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~-~g~-~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
.|++.+.. ..++||++++|++++.. +++ ...+...+...|.. ..+++.....++.+.....+..+...+. .
T Consensus 66 ~f~~~l~~----~~l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~~~~~~~g~~~~~s~~~~~~~~~~l-~ 138 (164)
T 2bmv_A 66 DFLGTLEA----SDFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTSTDGYHFEASKAVEGGKFVGL-V 138 (164)
T ss_dssp HHHTTCCT----HHHHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEECCCEESTTCCCSCCTTEETTEESSE-E
T ss_pred HHHHHHhh----hhcCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEEccccCCCccccchhhhhcCcccCc-c
Confidence 99999852 35789999999983321 221 12345567777665 6676642222222221111111111111 1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 158 FAGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
+ + ...+++++.++++++++.+.+
T Consensus 139 ~--~-~~~~~~~~~~~~~~w~~~l~~ 161 (164)
T 2bmv_A 139 I--D-EDNQDDLTDERISKWVEQVKG 161 (164)
T ss_dssp E--C-TTTCGGGHHHHHHHHHHHHTT
T ss_pred C--C-CCCccccCHHHHHHHHHHHHH
Confidence 1 1 123345689999999988864
No 54
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=99.57 E-value=4.3e-15 Score=107.58 Aligned_cols=117 Identities=23% Similarity=0.256 Sum_probs=74.3
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCC-CCCHHHhc---ccCC-CCCC-CCCCC--ChhHhhhCCEEEEeccccCC
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPE-TLPEEVLG---KMSA-PPKS-DVPII--TPNELAEADGFVFGFPTRFG 72 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~-~~~~~~~~---~~~~-~~~~-~~~~~--~~~~l~~aD~ii~gsP~y~g 72 (192)
++|||+++|+.|++++.. .++..+.+.+ .++.+... .... ...+ ..|.. ...++.+||+||||+|+|++
T Consensus 13 ~tGnT~~iA~~Ia~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~~d~iilG~P~~~g 89 (151)
T 3edo_A 13 WSGETKKMAEKINSEIKD---SELKEVKVSEGTFDADXYKTSDIALDQIQGNKDFPEIQLDNIDYNNYDLILIGSPVWSG 89 (151)
T ss_dssp SSSHHHHHHHHHHHHSTT---CEEEECBCCTTSSCSSHHHHHHHHHHHHTTSSCCCCCBCCCCCGGGCSEEEEEEEEETT
T ss_pred CCCcHHHHHHHHHHhccC---CCEEEEEcCCCCCCchhhhhhHHHHHHHhcccCCcccchhhhCHhhCCEEEEEcceecc
Confidence 689999999999999854 2432233211 12211100 0000 0000 12221 24689999999999999999
Q ss_pred CchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 73 MMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 73 ~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
++|++++.||+++. .+.+|++++|+++||..| .++..+...+. +..+.
T Consensus 90 ~~~~~~~~fl~~~~------~~~~k~~~~~t~gg~~~g---~~~~~l~~~~~--~~~~~ 137 (151)
T 3edo_A 90 YPATPIKTLLDQMK------NYRGEVASFFTSAGTNHK---AYVSHFNEWAD--GLNVI 137 (151)
T ss_dssp EECTHHHHHHHHTT------TCCSEEEEEEECSSCCHH---HHHHHHHHHTT--TSEEE
T ss_pred cccHHHHHHHHhch------hcCCEEEEEEEeCCCCCC---cHHHHHHHHcC--CCeee
Confidence 99999999999973 467888888888877532 34556666553 44444
No 55
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=99.56 E-value=1.5e-14 Score=106.81 Aligned_cols=114 Identities=16% Similarity=0.284 Sum_probs=76.9
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCC--CCH---HHhcccCCC-----CCCCCCCC--ChhHhhhCCEEEEecc
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPET--LPE---EVLGKMSAP-----PKSDVPII--TPNELAEADGFVFGFP 68 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~--~~~---~~~~~~~~~-----~~~~~~~~--~~~~l~~aD~ii~gsP 68 (192)
++|||+++|+.|++.+.. + ++++... ++. +.+..+..+ ..+..|.. ...++.++|.||||+|
T Consensus 23 ~tGnT~~vA~~Ia~~l~~----d--~~~I~~~~~y~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~yD~iilg~P 96 (171)
T 4ici_A 23 ATGTTARAAEKLGAAVGG----D--LYPIAPAQPYTSADLDWNNKRSRSSVEMNDPKMRPAIKSKKENIGTYDVVFIGYP 96 (171)
T ss_dssp SSSHHHHHHHHHHHHHTC----E--EEECCBSSCCCTGGGCTTCTTSHHHHHHHCTTCCCCBSCCCTTGGGCSEEEEEEE
T ss_pred CCChHHHHHHHHHHHhCC----C--eEEEeeCCCCCccccchhhHhHHHHHHHhcccCCcccccccccHhHCCEEEEecc
Confidence 489999999999999832 3 3444332 121 011000000 01111221 2368999999999999
Q ss_pred ccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 69 TRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 69 ~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
+|++++|++|+.||+++ .++||++++|+++||.+ ...++..+...+. +..+.
T Consensus 97 vy~g~~~~~~~~fl~~~-------~l~gk~v~~f~t~g~~~--~g~a~~~l~~~l~--~~~~~ 148 (171)
T 4ici_A 97 IWWDLAPRIINTFIEGH-------SLKGKTVVPFATSGGSS--IGNSATVLKKTYP--DLNWK 148 (171)
T ss_dssp CBTTBCCHHHHHHHHHS-------CCTTSEEEEEEECSSCC--SHHHHHHHHHHST--TSEEC
T ss_pred cccCCchHHHHHHHHHc-------CCCcCEEEEEEecCCCC--cchHHHHHHHHcC--CCeec
Confidence 99999999999999997 47999999999998764 3456777877664 45443
No 56
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=7.8e-15 Score=116.11 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHh--cccCCCC--------------------CCCCCCCChhHhhh
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVL--GKMSAPP--------------------KSDVPIITPNELAE 59 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~--~~~~~~~--------------------~~~~~~~~~~~l~~ 59 (192)
.++|..|++.+.+++++ .|.+|+++||.+..+..++ ..+.... .+|+. ...+++.+
T Consensus 35 ~S~n~aL~~~~~~~l~~-~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~-~~~~~l~~ 112 (280)
T 4gi5_A 35 RSLNGALKNFAIRHLQQ-AGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIV-AEQEKLLW 112 (280)
T ss_dssp TSHHHHHHHHHHHHHHH-TTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHH-HHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHH-CCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHH-HHHHHHHh
Confidence 46799999999999999 5999999999876432222 1111110 01111 12567999
Q ss_pred CCEEEEeccccCCCchHHHHHHHHhhccc-c----------------ccCCCCCCcEEEEEecCCC
Q 029532 60 ADGFVFGFPTRFGMMAAQFKAFLDATGGL-W----------------RTQQLAGKPAGMFYSTGSQ 108 (192)
Q Consensus 60 aD~ii~gsP~y~g~~~~~~k~fld~~~~~-~----------------~~~~l~gK~~~~~~s~g~~ 108 (192)
||.|||++|+||+++|+.||.||||+... | ..+.++||++.++.|.|+.
T Consensus 113 aD~iv~~~P~~w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g~~ 178 (280)
T 4gi5_A 113 ADTVIFQFPLWWFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGW 178 (280)
T ss_dssp CSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECSSC
T ss_pred CCEEEEEeccccccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecCCC
Confidence 99999999999999999999999998521 1 1235789999999988765
No 57
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=99.56 E-value=5.7e-14 Score=104.21 Aligned_cols=111 Identities=18% Similarity=0.274 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl 82 (192)
+++.++++.+++.+ .+|++++|.+.. |+. ...+++.+||.|||++|+||+++|++||.||
T Consensus 15 S~~~~~l~~~~~~~-----~~v~v~dL~~~~--------------D~~-~~~~~l~~aD~iV~~~P~y~~~~pa~lK~~i 74 (177)
T 3ha2_A 15 SNTQPFFKAAIENF-----SNVTWHPLVADF--------------NVE-QEQSLLLQNDRIILEFPLYWYSAPALLKQWM 74 (177)
T ss_dssp CSSHHHHHHHHTTC-----TTEEEEECCTTC--------------CHH-HHHHHHHTCSEEEEEEECBTTBCCHHHHHHH
T ss_pred CHHHHHHHHHHhcC-----CCEEEEECCCcc--------------cHH-HHHHHHHhCCEEEEECChhhccCCHHHHHHH
Confidence 45666676666554 368999998621 111 1258999999999999999999999999999
Q ss_pred Hhhccc-c---ccCCCCCCcEEEEEecCCCC-----C-----ChHHHHHHHHHHHHHcCCEEecC
Q 029532 83 DATGGL-W---RTQQLAGKPAGMFYSTGSQG-----G-----GQETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 83 d~~~~~-~---~~~~l~gK~~~~~~s~g~~~-----g-----~~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
||+... | ....++||++.+++|+|+.. + ..+..+..++..+...||..++.
T Consensus 75 Drv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~p~~~~~~~~G~~~~~~ 139 (177)
T 3ha2_A 75 DTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPI 139 (177)
T ss_dssp HHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTHHHHHHHHHTTCEECCC
T ss_pred HHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHHHHHHHHHhCCCeEeCe
Confidence 998532 1 12468999999999988652 1 12344555667778899999864
No 58
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.45 E-value=3.2e-13 Score=112.57 Aligned_cols=145 Identities=16% Similarity=0.158 Sum_probs=95.9
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhhcc
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGG 87 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~ 87 (192)
+.+.+++.+.+ ..++++++|.+.+|+ ..+|+.. ..++|.+||+|||++|+||+++|++||.|||++..
T Consensus 253 ~n~~l~~~~~~--~~~v~v~dL~~~~p~---------~~~d~~~-~~~~l~~aD~iv~~~P~yw~~~Pa~lK~~iDrv~~ 320 (413)
T 3l9w_A 253 ANKRMLEQART--LEGVEIRSLYQLYPD---------FNIDIAA-EQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFS 320 (413)
T ss_dssp HHHHHHHHHHT--SSSEEEEEHHHHCTT---------SCCCHHH-HHHHHHTCSEEEEEEECBTTBCCHHHHHHHHHHSC
T ss_pred HHHHHHHHHhc--CCCEEEEEchhhCCC---------CcHHHHH-HHHHHHhCCEEEEECchhhccCCHHHHHHHHHHHh
Confidence 45555555554 347889988654321 1122211 36899999999999999999999999999999863
Q ss_pred c-c----ccCCCCCCcEEEEEecCCCCC--------ChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCc
Q 029532 88 L-W----RTQQLAGKPAGMFYSTGSQGG--------GQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYG 154 (192)
Q Consensus 88 ~-~----~~~~l~gK~~~~~~s~g~~~g--------~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g 154 (192)
. | ....|+||++.+++|+|++.+ +....+..++..+...||.+++..+. +|
T Consensus 321 ~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~l~~~~~~~G~~~l~~~~~----------------~g 384 (413)
T 3l9w_A 321 HGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAM----------------HC 384 (413)
T ss_dssp BTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHHHHHHHHHTTCEECCCEEE----------------CC
T ss_pred cCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHHHHHHHHhCCCeecceEEE----------------cC
Confidence 3 1 112589999999988876421 11223456777788999999864221 11
Q ss_pred cceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 155 AGTFAGDGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
. ....+++..+.++++.++|.+.+.+
T Consensus 385 ~-------~~~~d~~~~~~~~~~~~~L~~~~~~ 410 (413)
T 3l9w_A 385 T-------FICDDETLEGQARHYKQRLLEWQEA 410 (413)
T ss_dssp S-------TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-------CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1123445567778888888877654
No 59
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=99.40 E-value=2.3e-12 Score=98.40 Aligned_cols=110 Identities=15% Similarity=-0.077 Sum_probs=88.2
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~k 79 (192)
++|||+.+|+.|++.+. .|++++++++.+.+ .+++.+++.|||++||| .|.+|..++
T Consensus 50 ~tGnte~~A~~La~~l~--~g~~v~v~~l~~~~--------------------~~~l~~~~~vI~~tsTyG~Ge~Pdna~ 107 (219)
T 3hr4_A 50 ETGKSEALAWDLGALFS--CAFNPKVVCMDKYR--------------------LSCLEEERLLLVVTSTFGNGDCPGNGE 107 (219)
T ss_dssp SSSHHHHHHHHHHHHHT--TTSEEEEEEGGGCC--------------------GGGGGTCSEEEEEEECBTTTBCCGGGH
T ss_pred CchHHHHHHHHHHHHHH--cCCCeEEEEcccCC--------------------HhHhccCCeEEEEEeccCCCcCCHHHH
Confidence 68999999999999984 48899999988642 36788999999999999 788999899
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~ 134 (192)
.|++.+... ...++|+++++|+.+.+..+....+...+...|...|...+.+.
T Consensus 108 ~F~~~L~~~--~~~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l~~~ 160 (219)
T 3hr4_A 108 KLKKSLFML--KELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPM 160 (219)
T ss_dssp HHHHHHHHC--CCCSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEESSCC
T ss_pred HHHHHHHhc--chhhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEeeCC
Confidence 999988532 12478999999998665443333556688888999999987653
No 60
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.35 E-value=6.2e-12 Score=110.85 Aligned_cols=139 Identities=16% Similarity=-0.024 Sum_probs=106.1
Q ss_pred CCCHHHHHHHHHHHhcc-ccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhC-CEEEEecccc-CCCchHH
Q 029532 1 MYGHVEKLAEEIKKGAS-SVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEA-DGFVFGFPTR-FGMMAAQ 77 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~-~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-D~ii~gsP~y-~g~~~~~ 77 (192)
++|||+++|+.|++.+. + .|++++++++.+. ...++.++ |.|||++||| .|.+|..
T Consensus 59 ~tGnte~~A~~ia~~l~~~-~g~~v~v~~l~~~--------------------~~~~l~~~~~~vi~~~sT~G~G~~p~~ 117 (682)
T 2bpo_A 59 QTGTAEGFAKAFSKELVAK-FNLNVMCADVENY--------------------DFESLNDVPVIVSIFISTYGEGDFPDG 117 (682)
T ss_dssp SSSHHHHHHHHHHHHHHHH-HCCCEEEEETTSS--------------------CGGGGGGCCSEEEEEEECBTTTBCCSS
T ss_pred CchHHHHHHHHHHHHhHHh-cCCceEEeehHHC--------------------CHHHHhhcCCeEEEEeCccCCCCCCHH
Confidence 68999999999999998 6 5889999998874 23678889 9999999999 8999999
Q ss_pred HHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCccce
Q 029532 78 FKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGT 157 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
++.|++.+.... ...++||++++|+++...++....+...+...|...|...+.+...+
T Consensus 118 ~~~F~~~l~~~~-~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~~~~~~-------------------- 176 (682)
T 2bpo_A 118 AVNFEDFICNAE-AGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEA-------------------- 176 (682)
T ss_dssp CHHHHHHHHTCC-TTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEE--------------------
T ss_pred HHHHHHHHHhcc-chhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeECcEEE--------------------
Confidence 999999986432 13489999999996543333334556688889999999988653321
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029532 158 FAGDGSRQPTELELEQAFHQGKHIAGIAKK 187 (192)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~~lg~~la~~~~~ 187 (192)
...+ ++..+.++..++.|.+.+..
T Consensus 177 -----D~~~-~~~~~~~~~W~~~l~~~l~~ 200 (682)
T 2bpo_A 177 -----DDGA-GTTDEDYMAWKDSILEVLKD 200 (682)
T ss_dssp -----ETTT-TCHHHHHHHHHHHHHHHHHH
T ss_pred -----ecCC-cccHHHHHHHHHHHHHHHHh
Confidence 1223 34567788888888776644
No 61
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=99.21 E-value=2.1e-11 Score=84.48 Aligned_cols=109 Identities=19% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-CCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~-g~~~~~~k 79 (192)
++|||+++|+.|+ + .| + ++.+ +.+ .+|.||||+|||+ |.+|..++
T Consensus 8 ~tGnT~~~A~~ia--~---~~--~---~i~~-----------------------~~~-~~~~ii~g~pt~~~g~~p~~~~ 53 (119)
T 2xod_A 8 MTGNVKRFIHKLN--M---PA--V---QIGE-----------------------DLV-IDEDFILITYTTGFGNVPERVL 53 (119)
T ss_dssp SSSHHHHHHHHHT--S---CE--E---ECCT-----------------------TCC-CCSCEEEEECCBTTTBCCHHHH
T ss_pred CChhHHHHHHHhc--c---cC--C---CcCc-----------------------ccc-cCCCEEEEEeecCCCcCCHHHH
Confidence 6899999999998 3 23 2 2211 122 4999999999995 89999999
Q ss_pred HHHHhhccccccCCCCCCcEEEEEecCCCCCC-hHHHHHHHHHHHHHcCCEEecCCccCCCCccccccccCCCCCcccee
Q 029532 80 AFLDATGGLWRTQQLAGKPAGMFYSTGSQGGG-QETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~-~~~~l~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
.|++. +++|++++|++++...+. ...+...+...+. .. ..+. +
T Consensus 54 ~fl~~---------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~~---~~---~~~~---------------------~ 97 (119)
T 2xod_A 54 EFLER---------NNEKLKGVSASGNRNWGDMFGASADKISAKYE---VP---IVSK---------------------F 97 (119)
T ss_dssp HHHHH---------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHHT---CC---EEEE---------------------E
T ss_pred HHHHH---------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHhC---Cc---cEEE---------------------E
Confidence 99976 356899999885432221 1223344544432 11 0111 1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 159 AGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 159 ~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
...|+++++++++++++++++
T Consensus 98 ----~~~~~~~d~~~~~~~~~~i~~ 118 (119)
T 2xod_A 98 ----ELSGTNNDVEYFKERVREIAT 118 (119)
T ss_dssp ----ETTCCHHHHHHHHHHHHHHTC
T ss_pred ----ecCCCHHHHHHHHHHHHHhcc
Confidence 246889999999999988763
No 62
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.13 E-value=2.3e-10 Score=99.88 Aligned_cols=113 Identities=17% Similarity=0.089 Sum_probs=86.0
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhh--hCCEEEEecccc-CCCchHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELA--EADGFVFGFPTR-FGMMAAQ 77 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aD~ii~gsP~y-~g~~~~~ 77 (192)
++|||+.+|+.+++.+++ .|++++++++.+.+..+. .++. +++.|||++||| .|.+|..
T Consensus 28 ~tGnte~~A~~la~~l~~-~g~~~~v~~~~~~~~~~l-----------------~~~~~~~~~~vi~~~sT~G~G~~pd~ 89 (618)
T 3qe2_A 28 QTGTAEEFANRLSKDAHR-YGMRGMSADPEEYDLADL-----------------SSLPEIDNALVVFCMATYGEGDPTDN 89 (618)
T ss_dssp SSSHHHHHHHHHHHHGGG-GTCCEEEECGGGSCGGGG-----------------GGGGGSTTCEEEEEEECBGGGBCCGG
T ss_pred ChhHHHHHHHHHHHHHHh-CCCceEEechHHcCHHHh-----------------hhcccccCcEEEEEcCccCCCCCCHH
Confidence 689999999999999988 599999998876432111 1222 589999999999 8999999
Q ss_pred HHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecC
Q 029532 78 FKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
++.|++.+... ...|+||++++|+++....+....+...+...|...|.+.+.+
T Consensus 90 ~~~F~~~L~~~--~~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~ 143 (618)
T 3qe2_A 90 AQDFYDWLQET--DVDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFE 143 (618)
T ss_dssp GHHHHHHHHHC--CCCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSC
T ss_pred HHHHHHHHhhc--cccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeec
Confidence 99999998621 1468999999999544333333344567888888999988754
No 63
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=98.99 E-value=5.1e-09 Score=92.37 Aligned_cols=111 Identities=15% Similarity=-0.072 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHHH
Q 029532 1 MYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~k 79 (192)
++|||+.+|+.+++.+.. |++++++++.+++ ..+|..++.|||++||| +|.+|..+.
T Consensus 21 ~TG~te~~A~~l~~~l~~--~~~~~v~~m~~~d--------------------~~~l~~~~~vl~vtsT~G~Gdpp~n~~ 78 (688)
T 1tll_A 21 ETGKSQAYAKTLCEIFKH--AFDAKAMSMEEYD--------------------IVHLEHEALVLVVTSTFGNGDPPENGE 78 (688)
T ss_dssp SSSHHHHHHHHHHHHHTT--TSEEEEEETTTSC--------------------TTSGGGCSEEEEEECCBTTTBCCGGGH
T ss_pred CchHHHHHHHHHHHHHhc--CCCcEEeecccCC--------------------hhHhccCceEEEEEcccCCCcCCHHHH
Confidence 589999999999999963 7899999988742 35677899999999999 899999999
Q ss_pred HHHHhhccccc----------------------------------------cCCCCCCcEEEEEecCCCCCChHHHHHHH
Q 029532 80 AFLDATGGLWR----------------------------------------TQQLAGKPAGMFYSTGSQGGGQETTALTA 119 (192)
Q Consensus 80 ~fld~~~~~~~----------------------------------------~~~l~gK~~~~~~s~g~~~g~~~~~l~~~ 119 (192)
.|++.+...-. ...|.|+++++|+.+.............+
T Consensus 79 ~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~~~~~aVfGlGds~Y~~F~~~~k~l 158 (688)
T 1tll_A 79 KFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLANVRFSVFGLGSRAYPHFCAFGHAV 158 (688)
T ss_dssp HHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTTTCEEEEEEEECTTSSSTTHHHHHH
T ss_pred HHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCCCCeEEEEeeccCchHHHHHHHHHH
Confidence 99998753200 12478999999996633333223445678
Q ss_pred HHHHHHcCCEEecC
Q 029532 120 ITQLVHHGMIFVPI 133 (192)
Q Consensus 120 ~~~l~~~g~~vv~~ 133 (192)
...|...|.+.+..
T Consensus 159 d~~L~~lGa~rl~~ 172 (688)
T 1tll_A 159 DTLLEELGGERILK 172 (688)
T ss_dssp HHHHHHTTCEESSC
T ss_pred HHHHHHcCCceeec
Confidence 88889999888754
No 64
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=98.35 E-value=4.8e-07 Score=64.71 Aligned_cols=89 Identities=16% Similarity=0.166 Sum_probs=58.4
Q ss_pred hhhCCEEEEeccccC-----CCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCC-hHHHHHHHHHHHHHcCCEE
Q 029532 57 LAEADGFVFGFPTRF-----GMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGG-QETTALTAITQLVHHGMIF 130 (192)
Q Consensus 57 l~~aD~ii~gsP~y~-----g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~-~~~~l~~~~~~l~~~g~~v 130 (192)
+...+-+|+++|||. |.+|.++..||+... ..++..++++++....+. .-.+...+.+.+ +.
T Consensus 56 ~~~~ep~vlv~PTYg~g~~~G~vP~~v~dFl~~~~-------n~~~~~gVigsGN~nfg~~Fc~A~d~ia~k~---~v-- 123 (153)
T 3n3a_C 56 IQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEH-------NRALLRGVIASGNRNFGEAYGRAGDVIARKC---GV-- 123 (153)
T ss_dssp CCCCSCEEEEEECCTTSSSSSSSCHHHHHHHTSHH-------HHHHEEEEEEEECGGGGGGTTHHHHHHHHHH---TC--
T ss_pred cccCCCEEEEEeccCCCCcCCcCcHHHHHHHhhhc-------ccCcEEEEEecCCCchhHHHHHHHHHHHHHh---CC--
Confidence 456788999999997 899999999997652 235667788775432222 123444454443 32
Q ss_pred ecCCccCCCCccccccccCCCCCccceecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029532 131 VPIGYTFGAGMFEMEKVKGGSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAG 183 (192)
Q Consensus 131 v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~ 183 (192)
+.-+. + ...++++|+++++++.+++.+
T Consensus 124 -P~l~k---------------------f----EL~Gt~eDv~~v~~~~~~~~~ 150 (153)
T 3n3a_C 124 -PWLYR---------------------F----ELMGTQSDIENVRKGVTEFWQ 150 (153)
T ss_dssp -CEEEE---------------------E----ETTCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEE---------------------E----eCCCCHHHHHHHHHHHHHHHh
Confidence 11111 1 246889999999999988765
No 65
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=98.29 E-value=1.1e-06 Score=62.18 Aligned_cols=88 Identities=18% Similarity=0.115 Sum_probs=55.6
Q ss_pred hhhCCEEEEecccc-CCCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCCh-HHHHHHHHHHHHHcCCEEecCC
Q 029532 57 LAEADGFVFGFPTR-FGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQ-ETTALTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 57 l~~aD~ii~gsP~y-~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~-~~~l~~~~~~l~~~g~~vv~~~ 134 (192)
+...|.+||++||| .|.+|..+..||+.. +++..++++++....|.. ..+...+ ....++.+.. .
T Consensus 41 ~~~~~~~ilv~pTyG~G~~P~~v~~Fl~~~---------~~~~~~V~g~Gd~~yg~~f~~a~~~i---~~~~~~~~~~-~ 107 (139)
T 1rlj_A 41 DHVDTPFVLVTYTTNFGQVPASTQSFLEKY---------AHLLLGVAASGNKVWGDNFAKSADTI---SRQYQVPILH-K 107 (139)
T ss_dssp SCCCSCEEEEECCBGGGBCCHHHHHHHHHH---------GGGEEEEEEEECGGGGGGTTHHHHHH---HHHHTCCEEE-E
T ss_pred cccCCCEEEEEcCcCCCcCcHHHHHHHHhC---------CCCEEEEEecCCCcHHHHHHHHHHHH---HHHcCCCCcc-e
Confidence 34457899999999 799999999999653 235777777654332221 2222223 2344543321 1
Q ss_pred ccCCCCccccccccCCCCCccceecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029532 135 YTFGAGMFEMEKVKGGSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAGI 184 (192)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~lg~~la~~ 184 (192)
+ ...++++|.++++++.+++.+.
T Consensus 108 ~---------------------------el~g~~~D~~~~~~~~~~~~~~ 130 (139)
T 1rlj_A 108 F---------------------------ELSGTSKDVELFTQEVERVVTK 130 (139)
T ss_dssp E---------------------------ETTCCHHHHHHHHHHHHHHHHH
T ss_pred E---------------------------EEcCCHHHHHHHHHHHHHHHHH
Confidence 1 1246788999999998888753
No 66
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=86.15 E-value=0.57 Score=31.05 Aligned_cols=69 Identities=20% Similarity=0.154 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH
Q 029532 4 HVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld 83 (192)
+|...++.+.+.+++ .|+++++---...-. ....+.+++.+||.||+++.+-.-.
T Consensus 17 hTymAAeaLekaA~~-~G~~ikVEtqgs~g~--------------~n~Lt~~~I~~AD~VIia~d~~v~~---------- 71 (106)
T 2m1z_A 17 HTYMAAQALKKGAKK-MGNLIKVETQGATGI--------------ENELTEKDVNIGEVVIFAVDTKVRN---------- 71 (106)
T ss_dssp HHHHHHHHHHHHHHH-HTCEEEEEEEETTEE--------------SSCCCHHHHHHCSEEEEEESSCCST----------
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEEecCccc--------------cCCCCHHHHhhCCEEEEeccccccc----------
Confidence 566668888888888 588776543221100 0012468999999999998864311
Q ss_pred hhccccccCCCCCCcEEEEEe
Q 029532 84 ATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~s 104 (192)
. .+|.||++.-..+
T Consensus 72 -~------~RF~gk~v~~~~v 85 (106)
T 2m1z_A 72 -K------ERFDGKVVLEVPV 85 (106)
T ss_dssp -H------HHHTTSEEEEECT
T ss_pred -h------hccCCCcEEEEcH
Confidence 1 2467899866655
No 67
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=83.99 E-value=1.1 Score=29.99 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH
Q 029532 4 HVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld 83 (192)
+|...++.+.+..++ .|+++++--=...-.. ...+.++|.+||.|||++-+-- +
T Consensus 20 HTyMAAeaL~~aA~~-~G~~ikVEtqGs~G~~--------------n~Lt~~~I~~Ad~VIiA~d~~v-----------~ 73 (111)
T 2kyr_A 20 HTFMAAQALEEAAVE-AGYEVKIETQGADGIQ--------------NRLTAQDIAEATIIIHSVAVTP-----------E 73 (111)
T ss_dssp HHHHHHHHHHHHHHH-TSSEEEEEEEETTEEE--------------SCCCHHHHHHCSEEEEEESSCC-----------T
T ss_pred HHHHHHHHHHHHHHH-CCCeEEEEecCCCCcC--------------CCCCHHHHHhCCEEEEEeCCCc-----------C
Confidence 577778888888888 5988766321110000 0124689999999999987641 1
Q ss_pred hhccccccCCCCCCcEEEEEe
Q 029532 84 ATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~s 104 (192)
. ..+|.||++.-..+
T Consensus 74 ~------~~RF~GK~v~~~~v 88 (111)
T 2kyr_A 74 D------NERFESRDVYEITL 88 (111)
T ss_dssp T------GGGGTTSCEEEEET
T ss_pred c------hhhcCCCeEEEeCH
Confidence 1 23689999976665
No 68
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=82.27 E-value=2 Score=28.45 Aligned_cols=70 Identities=16% Similarity=0.064 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl 82 (192)
.+|..|++.+.+.+++ .|+++++...+.. ...+.+.++|.|++|--+- + .-..++...
T Consensus 17 mSTsllv~km~~~a~~-~gi~v~i~a~~~~-------------------~~~~~~~~~DvvLLgPQV~-y-~~~~ik~~~ 74 (108)
T 3nbm_A 17 GTSAQLANAINEGANL-TEVRVIANSGAYG-------------------AHYDIMGVYDLIILAPQVR-S-YYREMKVDA 74 (108)
T ss_dssp SHHHHHHHHHHHHHHH-HTCSEEEEEEETT-------------------SCTTTGGGCSEEEECGGGG-G-GHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-CCCceEEEEcchH-------------------HHHhhccCCCEEEEChHHH-H-HHHHHHHHh
Confidence 4788899999999988 5888888553221 0135667899988863322 1 223333322
Q ss_pred HhhccccccCCCCCCcEEEEEe
Q 029532 83 DATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 83 d~~~~~~~~~~l~gK~~~~~~s 104 (192)
+ -.|+|+.++-.
T Consensus 75 ~----------~~~ipV~vI~~ 86 (108)
T 3nbm_A 75 E----------RLGIQIVATRG 86 (108)
T ss_dssp T----------TTTCEEEECCH
T ss_pred h----------hcCCcEEEeCH
Confidence 1 24788888754
No 69
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=78.89 E-value=1.5 Score=28.97 Aligned_cols=68 Identities=22% Similarity=0.189 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH
Q 029532 4 HVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld 83 (192)
||...++.+.+..++ .|+++++--=...-. ....+.+++.+||.|||.+-+-- |
T Consensus 17 hTymAaeaL~~aA~~-~G~~ikVEtqGs~G~--------------~n~Lt~~~I~~Ad~VIiA~d~~v-----------~ 70 (106)
T 2r48_A 17 HTYMAAENLQKAADR-LGVSIKVETQGGIGV--------------ENKLTEEEIREADAIIIAADRSV-----------N 70 (106)
T ss_dssp HHHHHHHHHHHHHHH-HTCEEEEEEEETTEE--------------ESCCCHHHHHHCSEEEEEESSCC-----------C
T ss_pred HHHHHHHHHHHHHHH-CCCeEEEEecCCCCc--------------cCCCCHHHHHhCCEEEEEeCCcc-----------C
Confidence 677778888888888 588766522111000 00124689999999999987541 1
Q ss_pred hhccccccCCCCCCcEEEEEe
Q 029532 84 ATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~s 104 (192)
..+|.||++.-..+
T Consensus 71 -------~~RF~GK~v~~~~v 84 (106)
T 2r48_A 71 -------KDRFIGKKLLSVGV 84 (106)
T ss_dssp -------CGGGTTSBEEEECH
T ss_pred -------HhHcCCCeEEEeCH
Confidence 13689999976655
No 70
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=77.75 E-value=10 Score=28.84 Aligned_cols=60 Identities=13% Similarity=0.024 Sum_probs=35.9
Q ss_pred HHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCch-HHHHHHHHhh
Q 029532 9 AEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMA-AQFKAFLDAT 85 (192)
Q Consensus 9 a~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~-~~~k~fld~~ 85 (192)
...|++.|++ .|++|+...+.+.. .. ...+.|.++|+||+-.-+-.+.++ .+.+.|.+++
T Consensus 34 ~~~i~~~L~~-~gf~V~~~t~dd~~--~~--------------~~~~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V 94 (252)
T 1t0b_A 34 HTVIASYLAE-AGFDAATAVLDEPE--HG--------------LTDEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRV 94 (252)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSSGG--GG--------------CCHHHHHTCSEEEEECSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHhh-CCcEEEEEeccCcc--cc--------------CCHhHHhcCCEEEEecCCCCCcCCHHHHHHHHHHH
Confidence 3455677776 58999987765420 00 124679999999984211223344 5566666665
No 71
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=76.90 E-value=4.2 Score=26.59 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc
Q 029532 5 VEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR 70 (192)
Q Consensus 5 T~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 70 (192)
|..+++.+.+.+++ .|+++++...+-. ...+.+.++|.|+++ |..
T Consensus 16 TS~l~~k~~~~~~~-~gi~~~i~a~~~~-------------------~~~~~~~~~Dvil~~-pqv 60 (106)
T 1e2b_A 16 TSLLVSKMRAQAEK-YEVPVIIEAFPET-------------------LAGEKGQNADVVLLG-PQI 60 (106)
T ss_dssp THHHHHHHHHHHHH-SCCSEEEEEECSS-------------------STTHHHHHCSEEEEC-TTS
T ss_pred HHHHHHHHHHHHHH-CCCCeEEEEecHH-------------------HHHhhccCCCEEEEc-cch
Confidence 44789999999988 5887766543321 013567889966655 543
No 72
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=75.85 E-value=5.5 Score=30.56 Aligned_cols=59 Identities=14% Similarity=-0.081 Sum_probs=37.8
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDAT 85 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~ 85 (192)
-+..+.+.+++ .|++|++++..+. +. ..++|.++|.||+.......-.+.+++.+-+.+
T Consensus 18 ~a~~l~~aL~~-~g~~V~~i~~~~~-----------------~~-~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV 76 (259)
T 3rht_A 18 AAGYLAGLMTS-WQWEFDYIPSHVG-----------------LD-VGELLAKQDLVILSDYPAERMTAQAIDQLVTMV 76 (259)
T ss_dssp THHHHHHHHHH-TTCCCEEECTTSC-----------------BC-SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCceEEEeccccc-----------------cc-ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHH
Confidence 35667777777 5899998876542 11 248999999999984222112345666666665
No 73
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=75.45 E-value=5.1 Score=26.48 Aligned_cols=46 Identities=20% Similarity=0.125 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHhccccCCceeEE--EEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKL--WQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR 70 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 70 (192)
|.+..++..+.+.+++ .|+++++ .++.+. ...+.++|.||.+.|.-
T Consensus 33 gTS~ll~~kl~~~~~~-~gi~~~V~~~~~~~~---------------------~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 33 ATSTMAAEEIKELCQS-HNIPVELIQCRVNEI---------------------ETYMDGVHLICTTARVD 80 (113)
T ss_dssp SHHHHHHHHHHHHHHH-TTCCEEEEEECTTTT---------------------TTSTTSCSEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHH-cCCeEEEEEecHHHH---------------------hhccCCCCEEEECCccc
Confidence 5667789999999988 5876543 333331 13356799888777764
No 74
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=74.54 E-value=1.5 Score=29.02 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH
Q 029532 4 HVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld 83 (192)
||...++.+.+..++ .|+++++--=...-. ....+.+++.+||.|||.+-+-- |
T Consensus 17 hTymAaeaL~~aA~~-~G~~ikVEtqGs~G~--------------~n~Lt~~~I~~Ad~VIiA~d~~v-----------~ 70 (106)
T 2r4q_A 17 HTFMAADALKEKAKE-LGVEIKVETNGSSGI--------------KHKLTAQEIEDAPAIIVAADKQV-----------E 70 (106)
T ss_dssp CHHHHHHHHHHHHHH-HTCCEEEEEEETTEE--------------ESCCCHHHHHHCSCEEEEESSCC-----------C
T ss_pred HHHHHHHHHHHHHHH-CCCeEEEEecCCCCc--------------cCCCCHHHHHhCCEEEEEeCCcc-----------C
Confidence 577778888888887 488766522111000 00124689999999999987541 1
Q ss_pred hhccccccCCCCCCcEEEEEe
Q 029532 84 ATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~s 104 (192)
..+|.||++.-..+
T Consensus 71 -------~~RF~GK~v~~~~v 84 (106)
T 2r4q_A 71 -------MERFKGKRVLQVPV 84 (106)
T ss_dssp -------CGGGTTSBEEEECH
T ss_pred -------HhHcCCCeEEEeCH
Confidence 13689999976655
No 75
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=66.11 E-value=8.7 Score=27.91 Aligned_cols=34 Identities=15% Similarity=0.299 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEE
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVF 65 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~ 65 (192)
||++.+++++ ++ .|+++++++ + .+++.++|+||+
T Consensus 13 ~n~~si~~al----~~-~G~~~~v~~--~----------------------~~~l~~~D~lil 46 (211)
T 4gud_A 13 ANISSVKFAI----ER-LGYAVTISR--D----------------------PQVVLAADKLFL 46 (211)
T ss_dssp TTHHHHHHHH----HH-TTCCEEEEC--C----------------------HHHHHHCSEEEE
T ss_pred ChHHHHHHHH----HH-CCCEEEEEC--C----------------------HHHHhCCCEEEE
Confidence 5777666655 44 488888753 1 478999999999
No 76
>3ups_A Iojap-like protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; HET: MSE; 1.75A {Zymomonas mobilis subsp}
Probab=65.66 E-value=8.9 Score=26.41 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH
Q 029532 4 HVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld 83 (192)
+++.+++.+.+.+.+..+.++.++|+.+. -.-+|.+||+|..- ..+++...|
T Consensus 18 ~~~~l~~~i~~al~dkKa~DI~vlDv~~~------------------------s~~~DyfVIatg~S----~rqv~Aiad 69 (136)
T 3ups_A 18 DPEMLLKLVTDSLDDDQALEIATIPLAGK------------------------SSIADYMVIASGRS----SRQVTAMAQ 69 (136)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEECTTT------------------------CSSCSEEEEEECSS----HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCC------------------------CcccCEEEEEEcCC----HHHHHHHHH
Confidence 46788999999998755779999999863 13468999998664 344454444
Q ss_pred hh
Q 029532 84 AT 85 (192)
Q Consensus 84 ~~ 85 (192)
.+
T Consensus 70 ~v 71 (136)
T 3ups_A 70 KL 71 (136)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 77
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=65.02 E-value=9.3 Score=26.11 Aligned_cols=53 Identities=8% Similarity=0.115 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHh
Q 029532 5 VEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 5 T~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~ 84 (192)
++.+++.+++.+.+..+.++.++|+.+. -.-+|.+||+|..-. .+++...|.
T Consensus 3 ~~~l~~~i~~al~dkKa~DI~vlDv~~~------------------------s~~~DyfVIaTg~S~----rqv~Aiad~ 54 (130)
T 2id1_A 3 IQEISKLAIEALEDIKGKDIIELDTSKL------------------------TSLFQRMIVATGDSN----RQVKALANS 54 (130)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEGGGT------------------------CSSCSEEEEEECSSH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCC------------------------CcccCEEEEEEcCCH----HHHHHHHHH
Confidence 6778999999997755779999998752 135789999986544 444444444
Q ss_pred h
Q 029532 85 T 85 (192)
Q Consensus 85 ~ 85 (192)
+
T Consensus 55 v 55 (130)
T 2id1_A 55 V 55 (130)
T ss_dssp H
T ss_pred H
Confidence 4
No 78
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=64.99 E-value=13 Score=24.61 Aligned_cols=63 Identities=19% Similarity=0.170 Sum_probs=40.7
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC--HHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP--EEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k 79 (192)
+|++...+..+++.+++ .|+++.++++....| .+.+ .+.+..++.||+.==.+.|++...++
T Consensus 21 ~Gs~~~~a~eA~~~L~~-~Gi~v~vi~~r~~~P~d~~~l---------------~~~~~~~~~vvvvE~~~~G~l~~~i~ 84 (118)
T 3ju3_A 21 WGSQKGPILDVIEDLKE-EGISANLLYLKMFSPFPTEFV---------------KNVLSSANLVIDVESNYTAQAAQMIK 84 (118)
T ss_dssp EGGGHHHHHHHHHHHHH-TTCCEEEEEECSSCSCCHHHH---------------HHHHTTCSCCCCCCCCCCCCHHHHHH
T ss_pred ECccHHHHHHHHHHHHH-CCCceEEEEECeEecCCHHHH---------------HHHHcCCCEEEEEECCCCCcHHHHHH
Confidence 58888888888888988 699999999887533 2222 24456666666443333355555444
Q ss_pred H
Q 029532 80 A 80 (192)
Q Consensus 80 ~ 80 (192)
.
T Consensus 85 ~ 85 (118)
T 3ju3_A 85 L 85 (118)
T ss_dssp H
T ss_pred H
Confidence 3
No 79
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=62.40 E-value=5.7 Score=25.98 Aligned_cols=44 Identities=16% Similarity=0.146 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHhccccCCceeEEE--EcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccc
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLW--QVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPT 69 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~ 69 (192)
|++ .+++.+.+.+++ .|+++++. ++.+ ..+.+.++|.|+.+.++
T Consensus 16 ~TS-ll~~kl~~~~~~-~gi~~~i~~~~~~~---------------------~~~~~~~~D~Ii~t~~l 61 (109)
T 2l2q_A 16 STS-MLVQRIEKYAKS-KNINATIEAIAETR---------------------LSEVVDRFDVVLLAPQS 61 (109)
T ss_dssp SSC-HHHHHHHHHHHH-HTCSEEEEEECSTT---------------------HHHHTTTCSEEEECSCC
T ss_pred hHH-HHHHHHHHHHHH-CCCCeEEEEecHHH---------------------HHhhcCCCCEEEECCcc
Confidence 455 788999999988 47765543 3332 12446789977766655
No 80
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=62.17 E-value=7.2 Score=28.70 Aligned_cols=50 Identities=18% Similarity=0.070 Sum_probs=28.0
Q ss_pred HHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 10 EEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 10 ~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
+.+.+.+++ .|++++.+++.+..+.+ ..+.|.++|+|+++- |+....|+.
T Consensus 47 ~s~~~a~~~-lG~~v~~~~i~~~~~~~----------------~~~~l~~ad~I~l~G----G~~~~l~~~ 96 (206)
T 3l4e_A 47 EAGKKALES-LGLLVEELDIATESLGE----------------ITTKLRKNDFIYVTG----GNTFFLLQE 96 (206)
T ss_dssp HHHHHHHHH-TTCEEEECCTTTSCHHH----------------HHHHHHHSSEEEECC----SCHHHHHHH
T ss_pred HHHHHHHHH-cCCeEEEEEecCCChHH----------------HHHHHHhCCEEEECC----CCHHHHHHH
Confidence 344455555 36666666554421111 137799999999943 555444443
No 81
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=61.84 E-value=25 Score=27.00 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=37.9
Q ss_pred HHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhhc
Q 029532 7 KLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~ 86 (192)
.|...++..+.+ .|.+|.+++..... ...+.+.++|.||++.|... +...++.+.
T Consensus 32 ~mG~~la~~l~~-~G~~V~~~~~~~~~------------------~~~~~~~~aDvVilavp~~~------~~~vl~~l~ 86 (298)
T 2pv7_A 32 KLGGLFARYLRA-SGYPISILDREDWA------------------VAESILANADVVIVSVPINL------TLETIERLK 86 (298)
T ss_dssp HHHHHHHHHHHT-TTCCEEEECTTCGG------------------GHHHHHTTCSEEEECSCGGG------HHHHHHHHG
T ss_pred HHHHHHHHHHHh-CCCeEEEEECCccc------------------CHHHHhcCCCEEEEeCCHHH------HHHHHHHHH
Confidence 356777888877 58888888743310 01356789999999999974 556666653
No 82
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=60.14 E-value=30 Score=24.72 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=23.2
Q ss_pred HHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhh--hCCEEEE-eccc
Q 029532 12 IKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELA--EADGFVF-GFPT 69 (192)
Q Consensus 12 i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aD~ii~-gsP~ 69 (192)
+.+.+++ .|++++++...+. ..+++. ++|+||+ |.|-
T Consensus 17 ~~~~l~~-~G~~~~v~~~~~~--------------------~~~~~~~~~~dglil~gG~~ 56 (195)
T 1qdl_B 17 IAQIVGE-LGSYPIVIRNDEI--------------------SIKGIERIDPDRLIISPGPG 56 (195)
T ss_dssp HHHHHHH-TTCEEEEEETTTS--------------------CHHHHHHHCCSEEEECCCSS
T ss_pred HHHHHHh-CCCEEEEEeCCCC--------------------CHHHHhhCCCCEEEECCCCC
Confidence 3444555 4888888875431 134555 5999999 6554
No 83
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=59.64 E-value=8.9 Score=25.99 Aligned_cols=53 Identities=11% Similarity=0.018 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHh
Q 029532 5 VEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 5 T~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~ 84 (192)
+..+++.+++.+.+..+.++.++|+.+. -.-+|.+|++|..-. .+++...|.
T Consensus 3 ~~~l~~~i~~al~dkKa~DI~vlDv~~~------------------------s~~~DyfVIatg~S~----rqv~Aiad~ 54 (125)
T 2o5a_A 3 NQELLQLAVNAVDDKKAEQVVALNMKGI------------------------SLIADFFLICHGNSE----KQVQAIAHE 54 (125)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECBTT------------------------BC--CEEEEEEESSH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCC------------------------CcccCEEEEEEcCCH----HHHHHHHHH
Confidence 4678888988887755779999999863 134689999986543 455555555
Q ss_pred h
Q 029532 85 T 85 (192)
Q Consensus 85 ~ 85 (192)
+
T Consensus 55 v 55 (125)
T 2o5a_A 55 L 55 (125)
T ss_dssp H
T ss_pred H
Confidence 4
No 84
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=58.03 E-value=60 Score=24.78 Aligned_cols=105 Identities=12% Similarity=0.067 Sum_probs=54.9
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCC-CCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH---H
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPP-KSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL---D 83 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl---d 83 (192)
|...++..+.+ .|.+|.+++..... .+.....+... .++ ..+.+.++|.||+..|.. ..++..+ +
T Consensus 18 mG~~~a~~l~~-~G~~V~~~dr~~~~-~~~~~~~g~~~~~~~----~~e~~~~aDvvi~~vp~~-----~~~~~v~~~~~ 86 (303)
T 3g0o_A 18 MGMGAARSCLR-AGLSTWGADLNPQA-CANLLAEGACGAAAS----AREFAGVVDALVILVVNA-----AQVRQVLFGED 86 (303)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSCHHH-HHHHHHTTCSEEESS----STTTTTTCSEEEECCSSH-----HHHHHHHC--C
T ss_pred HHHHHHHHHHH-CCCeEEEEECCHHH-HHHHHHcCCccccCC----HHHHHhcCCEEEEECCCH-----HHHHHHHhChh
Confidence 45566777766 58899988754321 11111111111 111 124567899999999963 3455555 3
Q ss_pred hhccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC
Q 029532 84 ATGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~ 134 (192)
.+. ..+ +++.+ +.++ . ....+...+...+...|..++..+
T Consensus 87 ~l~-----~~l~~g~iv--v~~s-t---~~~~~~~~~~~~~~~~g~~~~~~p 127 (303)
T 3g0o_A 87 GVA-----HLMKPGSAV--MVSS-T---ISSADAQEIAAALTALNLNMLDAP 127 (303)
T ss_dssp CCG-----GGSCTTCEE--EECS-C---CCHHHHHHHHHHHHTTTCEEEECC
T ss_pred hHH-----hhCCCCCEE--EecC-C---CCHHHHHHHHHHHHHcCCeEEeCC
Confidence 332 123 33333 2222 1 122344566666777788877644
No 85
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=55.89 E-value=17 Score=26.39 Aligned_cols=49 Identities=10% Similarity=0.195 Sum_probs=33.8
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhhc
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~ 86 (192)
|...++..+.+ .|.+|.+++..+ +.+.++|.||+..|. ..++..++.+.
T Consensus 30 mG~~la~~l~~-~g~~V~~~~~~~-----------------------~~~~~aD~vi~av~~------~~~~~v~~~l~ 78 (209)
T 2raf_A 30 MGQAIGHNFEI-AGHEVTYYGSKD-----------------------QATTLGEIVIMAVPY------PALAALAKQYA 78 (209)
T ss_dssp HHHHHHHHHHH-TTCEEEEECTTC-----------------------CCSSCCSEEEECSCH------HHHHHHHHHTH
T ss_pred HHHHHHHHHHH-CCCEEEEEcCCH-----------------------HHhccCCEEEEcCCc------HHHHHHHHHHH
Confidence 55667777766 488888776432 246789999999994 35666666653
No 86
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=53.63 E-value=8.7 Score=28.20 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=38.0
Q ss_pred HHHHHHHHhccccCCceeEE-EEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhh
Q 029532 7 KLAEEIKKGASSVEGVEAKL-WQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDAT 85 (192)
Q Consensus 7 ~la~~i~~~l~~~~g~ev~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~ 85 (192)
.|...++..+.+ .|.++.+ ++-............+..... ...+.+.++|.||+++|. ..+...+..+
T Consensus 33 ~mG~~la~~l~~-~g~~V~~v~~r~~~~~~~l~~~~g~~~~~----~~~~~~~~aDvVilavp~------~~~~~v~~~l 101 (220)
T 4huj_A 33 AIGSALAERFTA-AQIPAIIANSRGPASLSSVTDRFGASVKA----VELKDALQADVVILAVPY------DSIADIVTQV 101 (220)
T ss_dssp HHHHHHHHHHHH-TTCCEEEECTTCGGGGHHHHHHHTTTEEE----CCHHHHTTSSEEEEESCG------GGHHHHHTTC
T ss_pred HHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHhCCCccc----ChHHHHhcCCEEEEeCCh------HHHHHHHHHh
Confidence 466777777777 4888877 443221111111111110000 124678899999999993 4556666665
Q ss_pred c
Q 029532 86 G 86 (192)
Q Consensus 86 ~ 86 (192)
.
T Consensus 102 ~ 102 (220)
T 4huj_A 102 S 102 (220)
T ss_dssp S
T ss_pred h
Confidence 3
No 87
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=53.41 E-value=33 Score=26.19 Aligned_cols=105 Identities=10% Similarity=0.119 Sum_probs=54.6
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH---h
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD---A 84 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld---~ 84 (192)
|...++..+.+ .|.+|.+++..... .+.+...+....+ ...+.+.++|.||+..|.. ..++..+. .
T Consensus 14 mG~~~a~~l~~-~G~~V~~~d~~~~~-~~~~~~~g~~~~~----~~~~~~~~aDvvi~~vp~~-----~~~~~v~~~~~~ 82 (302)
T 2h78_A 14 MGAPMATNLLK-AGYLLNVFDLVQSA-VDGLVAAGASAAR----SARDAVQGADVVISMLPAS-----QHVEGLYLDDDG 82 (302)
T ss_dssp THHHHHHHHHH-TTCEEEEECSSHHH-HHHHHHTTCEECS----SHHHHHTTCSEEEECCSCH-----HHHHHHHHSSSC
T ss_pred HHHHHHHHHHh-CCCeEEEEcCCHHH-HHHHHHCCCeEcC----CHHHHHhCCCeEEEECCCH-----HHHHHHHcCchh
Confidence 34556666666 48888888754311 1111111100000 1135577899999999863 45777776 4
Q ss_pred hccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC
Q 029532 85 TGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 85 ~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~ 134 (192)
+. ..+ +++.+ +.++ .. .......+...+...|..++..+
T Consensus 83 ~~-----~~l~~~~~v--i~~s-t~---~~~~~~~l~~~~~~~g~~~~~~p 122 (302)
T 2h78_A 83 LL-----AHIAPGTLV--LECS-TI---APTSARKIHAAARERGLAMLDAP 122 (302)
T ss_dssp GG-----GSSCSSCEE--EECS-CC---CHHHHHHHHHHHHHTTCCEEECC
T ss_pred HH-----hcCCCCcEE--EECC-CC---CHHHHHHHHHHHHHcCCEEEEEE
Confidence 42 123 34432 3222 11 22334456666777788777644
No 88
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=51.88 E-value=71 Score=24.53 Aligned_cols=107 Identities=11% Similarity=0.100 Sum_probs=56.7
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH---Hh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL---DA 84 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl---d~ 84 (192)
|...++..+.+ .|.+|.+++.......... ..+....+ ...+.+.++|.||+..|.- ..++..+ +.
T Consensus 32 mG~~~A~~l~~-~G~~V~~~dr~~~~~~~l~-~~g~~~~~----~~~~~~~~aDvvi~~vp~~-----~~~~~v~~~~~~ 100 (310)
T 3doj_A 32 MGKAMSMNLLK-NGFKVTVWNRTLSKCDELV-EHGASVCE----SPAEVIKKCKYTIAMLSDP-----CAALSVVFDKGG 100 (310)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSSGGGGHHHH-HTTCEECS----SHHHHHHHCSEEEECCSSH-----HHHHHHHHSTTC
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHHHHHHH-HCCCeEcC----CHHHHHHhCCEEEEEcCCH-----HHHHHHHhCchh
Confidence 55666777766 5889999886543211111 11100000 1135578899999999863 3456555 33
Q ss_pred hccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 85 TGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 85 ~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
+.. ...+|+.+ +.++ .. ...+...+...+...|..+++.+.
T Consensus 101 l~~----~l~~g~~v--v~~s-t~---~~~~~~~~~~~~~~~g~~~v~~pv 141 (310)
T 3doj_A 101 VLE----QICEGKGY--IDMS-TV---DAETSLKINEAITGKGGRFVEGPV 141 (310)
T ss_dssp GGG----GCCTTCEE--EECS-CC---CHHHHHHHHHHHHHTTCEEEECCE
T ss_pred hhh----ccCCCCEE--EECC-CC---CHHHHHHHHHHHHHcCCEEEeCCC
Confidence 321 11234433 2222 11 223445666677778888876543
No 89
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=49.74 E-value=11 Score=24.50 Aligned_cols=44 Identities=14% Similarity=0.032 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhccccCCce-eEE--EEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccc
Q 029532 4 HVEKLAEEIKKGASSVEGVE-AKL--WQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPT 69 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~e-v~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~ 69 (192)
++..++..+.+.+++ .|++ +++ .++.+ ....+.++|.||.+.|.
T Consensus 31 TS~m~~~kl~~~~~~-~gi~~~~i~~~~~~~---------------------~~~~~~~~DlIi~t~~l 77 (110)
T 3czc_A 31 SSMVIKMKVENALRQ-LGVSDIESASCSVGE---------------------AKGLASNYDIVVASNHL 77 (110)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCEEEEEECHHH---------------------HHHHGGGCSEEEEETTT
T ss_pred HHHHHHHHHHHHHHH-cCCCeEEEEEeeHHH---------------------HhhccCCCcEEEECCch
Confidence 344444488888887 5766 443 33222 12346789977777655
No 90
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=49.55 E-value=14 Score=27.39 Aligned_cols=25 Identities=20% Similarity=0.105 Sum_probs=19.8
Q ss_pred hHhhhCCEEEEeccccCCCchHHHHHHHHhhc
Q 029532 55 NELAEADGFVFGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 55 ~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~ 86 (192)
..+.++|.|||.||. -++.|++.+.
T Consensus 46 ~~l~~~d~viftS~~-------aV~~~~~~l~ 70 (240)
T 3mw8_A 46 DELSRADILIFISTS-------AVSFATPWLK 70 (240)
T ss_dssp HHHTTCSEEEECSHH-------HHHHHHHHHT
T ss_pred HHhcCCCEEEEECHH-------HHHHHHHHHH
Confidence 567889999999985 5677777764
No 91
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=48.68 E-value=39 Score=26.40 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC--HHHhcccCCCCCCCCCCCChhHhhhCCEEEEe-ccccCCCchHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP--EEVLGKMSAPPKSDVPIITPNELAEADGFVFG-FPTRFGMMAAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~g-sP~y~g~~~~~~ 78 (192)
+|++-..+.++++.+++ .|++++++++....| .+.+ .+.+..++.||+. -....|++...+
T Consensus 209 ~G~~~~~a~~Aa~~L~~-~Gi~v~vi~~~~l~P~d~~~i---------------~~~~~~~~~vvvvEe~~~~Gg~g~~v 272 (324)
T 1w85_B 209 YGAMVHESLKAAAELEK-EGISAEVVDLRTVQPLDIETI---------------IGSVEKTGRAIVVQEAQRQAGIAANV 272 (324)
T ss_dssp CTTHHHHHHHHHHHHHH-TTCCEEEEECSEEESCCHHHH---------------HHHHHHHSCEEEEEEEETTSSSHHHH
T ss_pred ecHHHHHHHHHHHHHHh-cCCCEEEEEeeeecCCCHHHH---------------HHHHhhCCcEEEEeCCCcCChHHHHH
Confidence 68888888888999987 699999999876422 1111 3455566655554 333357777777
Q ss_pred HHHHHh
Q 029532 79 KAFLDA 84 (192)
Q Consensus 79 k~fld~ 84 (192)
..++..
T Consensus 273 ~~~l~~ 278 (324)
T 1w85_B 273 VAEINE 278 (324)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777654
No 92
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=48.38 E-value=73 Score=24.01 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=54.8
Q ss_pred HHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH---Hhh
Q 029532 9 AEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL---DAT 85 (192)
Q Consensus 9 a~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl---d~~ 85 (192)
...++..+.+ .|.+|.+++............ +....+ ...+.+.++|.||+..|.. ..++..+ +.+
T Consensus 13 G~~~a~~l~~-~G~~V~~~dr~~~~~~~~~~~-g~~~~~----~~~~~~~~advvi~~v~~~-----~~~~~v~~~~~~l 81 (287)
T 3pdu_A 13 GGPMAANLVR-AGFDVTVWNRNPAKCAPLVAL-GARQAS----SPAEVCAACDITIAMLADP-----AAAREVCFGANGV 81 (287)
T ss_dssp HHHHHHHHHH-HTCCEEEECSSGGGGHHHHHH-TCEECS----CHHHHHHHCSEEEECCSSH-----HHHHHHHHSTTCG
T ss_pred HHHHHHHHHH-CCCeEEEEcCCHHHHHHHHHC-CCeecC----CHHHHHHcCCEEEEEcCCH-----HHHHHHHcCchhh
Confidence 3445555655 388899887654311111111 100000 1134568899999999963 3566666 444
Q ss_pred ccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 86 GGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 86 ~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
. ..+ +|+.+ +.++ . ........+...+...|..++..+.
T Consensus 82 ~-----~~l~~g~~v--v~~s-t---~~~~~~~~~~~~~~~~g~~~~~~pv 121 (287)
T 3pdu_A 82 L-----EGIGGGRGY--IDMS-T---VDDETSTAIGAAVTARGGRFLEAPV 121 (287)
T ss_dssp G-----GTCCTTCEE--EECS-C---CCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred h-----hcccCCCEE--EECC-C---CCHHHHHHHHHHHHHcCCEEEECCc
Confidence 2 123 34433 2222 1 1223445666667778888876543
No 93
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=48.20 E-value=79 Score=24.93 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=26.4
Q ss_pred hhHhhhCCEEEEeccccCCC-chHHHHHHHHhhc
Q 029532 54 PNELAEADGFVFGFPTRFGM-MAAQFKAFLDATG 86 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP~y~g~-~~~~~k~fld~~~ 86 (192)
.+.+.++|.+|+-+|- |. -+...|+|++.+.
T Consensus 136 ~EAvk~AEi~IlftPf--G~~t~~Iakkii~~lp 167 (358)
T 2b0j_A 136 REAVEGADIVITWLPK--GNKQPDIIKKFADAIP 167 (358)
T ss_dssp HHHHTTCSEEEECCTT--CTTHHHHHHHHGGGSC
T ss_pred HHHhcCCCEEEEecCC--CCCcHHHHHHHHhhCc
Confidence 6889999999999997 55 5678899999873
No 94
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=47.03 E-value=41 Score=26.79 Aligned_cols=105 Identities=12% Similarity=0.186 Sum_probs=54.5
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhC---CEEEEeccccCCCchHHHHHHHHh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEA---DGFVFGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a---D~ii~gsP~y~g~~~~~~k~fld~ 84 (192)
|...++..+.+ .|.+|.+++..... .+.+...+....+ ...+.+.++ |.||+..|.. . +...++.
T Consensus 33 mG~~~A~~L~~-~G~~V~v~dr~~~~-~~~l~~~g~~~~~----s~~e~~~~a~~~DvVi~~vp~~--~----v~~vl~~ 100 (358)
T 4e21_A 33 MGADMVRRLRK-GGHECVVYDLNVNA-VQALEREGIAGAR----SIEEFCAKLVKPRVVWLMVPAA--V----VDSMLQR 100 (358)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSCHHH-HHHHHTTTCBCCS----SHHHHHHHSCSSCEEEECSCGG--G----HHHHHHH
T ss_pred HHHHHHHHHHh-CCCEEEEEeCCHHH-HHHHHHCCCEEeC----CHHHHHhcCCCCCEEEEeCCHH--H----HHHHHHH
Confidence 45566666766 58899888764321 1111111110001 113446677 9999999986 3 4445555
Q ss_pred hccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 85 TGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 85 ~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
+.. .+ +|+. +...+.. .......+...+...|+.+++.+.
T Consensus 101 l~~-----~l~~g~i---iId~st~---~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 101 MTP-----LLAANDI---VIDGGNS---HYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp HGG-----GCCTTCE---EEECSSC---CHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHh-----hCCCCCE---EEeCCCC---ChHHHHHHHHHHHHCCCEEEeCCC
Confidence 531 23 2333 2232222 122334566667788888886544
No 95
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=45.77 E-value=97 Score=23.54 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=57.4
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhhcc
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGG 87 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~ 87 (192)
|...++..+.+ .|.+|.+++............ +... ....+++.++|.||+..|.. ..++..++.+.
T Consensus 26 mG~~~A~~l~~-~G~~V~~~dr~~~~~~~~~~~-g~~~-----~~~~~~~~~aDvvi~~vp~~-----~~~~~v~~~l~- 92 (296)
T 3qha_A 26 MGAPMATRMTE-WPGGVTVYDIRIEAMTPLAEA-GATL-----ADSVADVAAADLIHITVLDD-----AQVREVVGELA- 92 (296)
T ss_dssp THHHHHHHHTT-STTCEEEECSSTTTSHHHHHT-TCEE-----CSSHHHHTTSSEEEECCSSH-----HHHHHHHHHHH-
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHC-CCEE-----cCCHHHHHhCCEEEEECCCh-----HHHHHHHHHHH-
Confidence 34556677777 589999998765422222211 1000 01234544499999999963 35666666653
Q ss_pred ccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 88 LWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 88 ~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
..+ +++.+ +.++ .. ...+...+...+...|..+++.+.
T Consensus 93 ----~~l~~g~iv--v~~s-t~---~~~~~~~~~~~~~~~g~~~~~~pv 131 (296)
T 3qha_A 93 ----GHAKPGTVI--AIHS-TI---SDTTAVELARDLKARDIHIVDAPV 131 (296)
T ss_dssp ----TTCCTTCEE--EECS-CC---CHHHHHHHHHHHGGGTCEEEECCE
T ss_pred ----HhcCCCCEE--EEeC-CC---CHHHHHHHHHHHHHcCCEEEeCCC
Confidence 123 33332 2222 11 223445666777777888876543
No 96
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=45.69 E-value=19 Score=31.68 Aligned_cols=82 Identities=15% Similarity=0.001 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC-----------
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF----------- 71 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~----------- 71 (192)
|..+.-+..+.+.|++ .|++|+++...... ..+..+. ..+-.++|+|||---...
T Consensus 541 Gfe~~E~~~~~~~L~~-aG~~V~vVs~~~g~----------~vD~t~~---~~~s~~fDAVvlPGG~~g~~~~~~~~~~~ 606 (688)
T 2iuf_A 541 PASIAQGAKLQVALSS-VGVDVVVVAERXAN----------NVDETYS---ASDAVQFDAVVVADGAEGLFGADSFTVEP 606 (688)
T ss_dssp HHHHHHHHHHHHHHGG-GTCEEEEEESSCCT----------TCCEEST---TCCGGGCSEEEECTTCGGGCCTTTTTCCC
T ss_pred CCcHHHHHHHHHHHHH-CCCEEEEEeccCCc----------ccccchh---cCCccccCeEEecCCCccccccccccccc
Confidence 4555667888899999 59999999875321 0000111 135678999999644321
Q ss_pred --------CCchHHHHHHHHhhccccccCCCCCCcEEEEEec
Q 029532 72 --------GMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST 105 (192)
Q Consensus 72 --------g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~ 105 (192)
-...+.+..|+.... -.||+++.+|.+
T Consensus 607 ~~~~~~~~L~~~~~~~~~v~~~~-------~~gKpIaAIc~a 641 (688)
T 2iuf_A 607 SAGSGASTLYPAGRPLNILLDAF-------RFGKTVGALGSG 641 (688)
T ss_dssp CTTSCCCSSSCTTHHHHHHHHHH-------HHTCEEEEEGGG
T ss_pred ccccchhhcccChHHHHHHHHHH-------HcCCEEEEECch
Confidence 223566777776653 268999988764
No 97
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=44.31 E-value=21 Score=27.13 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=31.2
Q ss_pred HHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc
Q 029532 9 AEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR 70 (192)
Q Consensus 9 a~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 70 (192)
|+.+.+.|+. .+.+|+.+...+. . ..+|. ..++|.++|.||+.-.-.
T Consensus 35 ~~~~~~aL~~-~~~~V~~i~~~~~-----~--------~~fP~-~~~~L~~yDvIIl~d~~~ 81 (248)
T 3soz_A 35 ADYLLSCLRQ-GNIDVDYMPAHIV-----Q--------TRFPQ-TAEALACYDAIVISDIGS 81 (248)
T ss_dssp SHHHHHHHTT-TTCEEEEEETTHH-----H--------HSCCC-SHHHHHTCSEEEEESCCH
T ss_pred HHHHHHHHhc-CCceeEEeCchhh-----h--------hhCCC-ChHHHhcCCEEEEcCCCc
Confidence 3457777877 5889998875431 1 01232 358999999999994443
No 98
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=42.96 E-value=1.1e+02 Score=23.41 Aligned_cols=64 Identities=13% Similarity=0.102 Sum_probs=37.7
Q ss_pred HHHHHHHHHhccccCC-ceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCc-hHHHHHHHH
Q 029532 6 EKLAEEIKKGASSVEG-VEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMM-AAQFKAFLD 83 (192)
Q Consensus 6 ~~la~~i~~~l~~~~g-~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~-~~~~k~fld 83 (192)
......+.+.+++ .| ++|++.+-.+. + .+.+ ...++|.++|+||+.+. ...+ ..+.+.|.+
T Consensus 19 ~~~~~~l~~~l~~-~g~f~V~~~~d~~~-~------------~d~~-~f~~~L~~~D~vV~~~~--~~~l~~~~~~~l~~ 81 (281)
T 4e5v_A 19 QVSHVVLKQILEN-SGRFDVDFVISPEQ-G------------KDMS-GFVLDFSPYQLVVLDYN--GDSWPEETNRRFLE 81 (281)
T ss_dssp HHHHHHHHHHHHH-TTSEEEEEEECCCT-T------------SCCT-TCCCCCTTCSEEEECCC--SSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCCEEEEEEeCCcc-c------------cchh-HHhhhhhcCCEEEEeCC--CCcCCHHHHHHHHH
Confidence 4556677777776 46 88888764311 0 0000 11146899999997552 2233 567777777
Q ss_pred hhc
Q 029532 84 ATG 86 (192)
Q Consensus 84 ~~~ 86 (192)
++.
T Consensus 82 yV~ 84 (281)
T 4e5v_A 82 YVQ 84 (281)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 99
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=42.22 E-value=67 Score=25.35 Aligned_cols=67 Identities=16% Similarity=0.032 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC--HHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP--EEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~ 78 (192)
+|++-..+.++++.+++ .|+++.++++....| .+.+ .+.+..++.||+.=--+ .|++-..+
T Consensus 224 ~Gs~~~~a~~Aa~~L~~-~Gi~v~vv~~~~l~P~d~~~i---------------~~~~~~~~~vv~vEe~~~~Gg~g~~v 287 (341)
T 2ozl_B 224 HSRPVGHCLEAAAVLSK-EGVECEVINMRTIRPMDMETI---------------EASVMKTNHLVTVEGGWPQFGVGAEI 287 (341)
T ss_dssp CSTHHHHHHHHHHHHHT-TTCCEEEEECCEEETCCHHHH---------------HHHHHHHSCEEEECSSCSTTCHHHHH
T ss_pred eCHHHHHHHHHHHHHHh-cCCCeEEEeeeeecCCCHHHH---------------HHHHhcCCeEEEEecCcccCcHHHHH
Confidence 68888888888888887 689999999876422 1111 34555666555543222 46666666
Q ss_pred HHHHHh
Q 029532 79 KAFLDA 84 (192)
Q Consensus 79 k~fld~ 84 (192)
..++..
T Consensus 288 ~~~l~~ 293 (341)
T 2ozl_B 288 CARIME 293 (341)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666644
No 100
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=40.97 E-value=46 Score=25.96 Aligned_cols=67 Identities=18% Similarity=0.242 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC--HHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc-CCCchHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP--EEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR-FGMMAAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~g~~~~~~ 78 (192)
+|++-..+..+++.+++ .|++++++++....| .+.+ .+.+..++.||+.=--+ .+++-..+
T Consensus 210 ~G~~~~~a~~Aa~~L~~-~Gi~v~vi~~~~l~P~d~~~i---------------~~~~~~~~~vv~vEe~~~~gG~g~~v 273 (324)
T 1umd_B 210 YGTVMPEVLQAAAELAK-AGVSAEVLDLRTLMPWDYEAV---------------MNSVAKTGRVVLVSDAPRHASFVSEV 273 (324)
T ss_dssp CGGGHHHHHHHHHHHHH-TTCCEEEEECCEEETCCHHHH---------------HHHHHHHSCEEEEEEEESTTCHHHHH
T ss_pred ecHHHHHHHHHHHHHHh-cCCCEEEEEeceecCCCHHHH---------------HHHHhcCCeEEEEecCCcCCCHHHHH
Confidence 57788888888888887 699999999876422 1111 34556666665553222 46666666
Q ss_pred HHHHHh
Q 029532 79 KAFLDA 84 (192)
Q Consensus 79 k~fld~ 84 (192)
..++-.
T Consensus 274 ~~~l~~ 279 (324)
T 1umd_B 274 AATIAE 279 (324)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 101
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=40.88 E-value=25 Score=26.61 Aligned_cols=59 Identities=10% Similarity=0.042 Sum_probs=34.9
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCC---HHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLP---EEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~ 84 (192)
-+..+.+.+++ .|+++..+.+-+..+ ...+. .....+.++|.|||.||. -++.|++.
T Consensus 25 ~a~~l~~~L~~-~G~~~~~~P~i~i~~~~~~~~l~------------~~l~~l~~~d~vifTS~n-------aV~~~~~~ 84 (269)
T 3re1_A 25 ESAALARVLAD-AGIFSSSLPLLETEPLPLTPAQR------------SIIFELLNYSAVIVVSKP-------AARLAIEL 84 (269)
T ss_dssp HHHHHHHHHHT-TTCEEEECCCCEEEECCCHHHHH------------HHHHTGGGSSEEEECSHH-------HHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCEEEcCCEEEecCCCcHHHH------------HHHHhccCCCEEEEECHH-------HHHHHHHH
Confidence 35667777877 587766554433211 00000 012467899999999985 45666666
Q ss_pred hc
Q 029532 85 TG 86 (192)
Q Consensus 85 ~~ 86 (192)
+.
T Consensus 85 l~ 86 (269)
T 3re1_A 85 ID 86 (269)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 102
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=40.72 E-value=1.1e+02 Score=22.89 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=55.7
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH---Hh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL---DA 84 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl---d~ 84 (192)
|...++..+.+ .|.+|.+++........... .+....+ ...+.+.++|.||+..|.- ..++..+ +.
T Consensus 12 mG~~~a~~l~~-~G~~V~~~dr~~~~~~~~~~-~g~~~~~----~~~~~~~~aDvvi~~vp~~-----~~~~~v~~~~~~ 80 (287)
T 3pef_A 12 MGSAMAKNLVK-AGCSVTIWNRSPEKAEELAA-LGAERAA----TPCEVVESCPVTFAMLADP-----AAAEEVCFGKHG 80 (287)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSSGGGGHHHHH-TTCEECS----SHHHHHHHCSEEEECCSSH-----HHHHHHHHSTTC
T ss_pred HHHHHHHHHHH-CCCeEEEEcCCHHHHHHHHH-CCCeecC----CHHHHHhcCCEEEEEcCCH-----HHHHHHHcCcch
Confidence 45566677766 58899988765432111111 1100000 1135578899999999853 3455555 33
Q ss_pred hccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 85 TGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 85 ~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
+. ..+ +|+.+ +.++ + ....+...+...+...|..+++.+.
T Consensus 81 l~-----~~l~~~~~v--i~~s-t---~~~~~~~~~~~~~~~~g~~~~~~pv 121 (287)
T 3pef_A 81 VL-----EGIGEGRGY--VDMS-T---VDPATSQRIGVAVVAKGGRFLEAPV 121 (287)
T ss_dssp HH-----HHCCTTCEE--EECS-C---CCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred Hh-----hcCCCCCEE--EeCC-C---CCHHHHHHHHHHHHHhCCEEEECCC
Confidence 32 112 34433 2222 1 1223445666667778888876443
No 103
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=39.03 E-value=27 Score=26.34 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=25.5
Q ss_pred HHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEec
Q 029532 10 EEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGF 67 (192)
Q Consensus 10 ~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gs 67 (192)
+.+.+.|+. .+++|+++...+ .. +.+|. ..+++.++|.||+.-
T Consensus 43 ~~l~~aL~~-~~~~v~~~~~~~-----~~--------~~fp~-~~~~L~~yDvIIl~~ 85 (256)
T 2gk3_A 43 TWLLECLRK-GGVDIDYMPAHT-----VQ--------IAFPE-SIDELNRYDVIVISD 85 (256)
T ss_dssp HHHHHHHHH-TTCEEEEECHHH-----HH--------HCCCC-SHHHHHTCSEEEEES
T ss_pred HHHHHHHHh-cCceEEEEeccc-----ch--------hhCCc-ChhHHhcCCEEEEeC
Confidence 345555665 478888873220 00 01221 257899999999985
No 104
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=37.21 E-value=15 Score=28.04 Aligned_cols=59 Identities=14% Similarity=0.049 Sum_probs=32.8
Q ss_pred HHHHHHHHhccccCCc---eeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc
Q 029532 7 KLAEEIKKGASSVEGV---EAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR 70 (192)
Q Consensus 7 ~la~~i~~~l~~~~g~---ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 70 (192)
.|...++.++.+ .|. +|.+++.............+..... ...+.+.++|.||++.|.+
T Consensus 13 ~mG~aia~~l~~-~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~----~~~~~~~~aDvVilav~p~ 74 (280)
T 3tri_A 13 NMARNIVVGLIA-NGYDPNRICVTNRSLDKLDFFKEKCGVHTTQ----DNRQGALNADVVVLAVKPH 74 (280)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEECSSSHHHHHHHHTTCCEEES----CHHHHHSSCSEEEECSCGG
T ss_pred HHHHHHHHHHHH-CCCCCCeEEEEeCCHHHHHHHHHHcCCEEeC----ChHHHHhcCCeEEEEeCHH
Confidence 366777788777 476 7888775432111111110100000 1146678999999999863
No 105
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=35.16 E-value=1.1e+02 Score=25.01 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=21.2
Q ss_pred CCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 94 LAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 94 l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
++|+++++++.+-...|..-.....+...+...|+.+.
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~ 226 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVT 226 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEE
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEE
Confidence 68889988765422212112233455555667787764
No 106
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=35.09 E-value=1.2e+02 Score=26.14 Aligned_cols=67 Identities=7% Similarity=-0.015 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCC--HHHhcccCCCCCCCCCCCChhHhhhC-CEEEEeccc-cCCCchHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLP--EEVLGKMSAPPKSDVPIITPNELAEA-DGFVFGFPT-RFGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~a-D~ii~gsP~-y~g~~~~~ 77 (192)
+|+.-..|..+++.|++ .|++++++++....| .+.+ .+.+... ..||+.--- ..|++-..
T Consensus 506 ~G~~v~~al~Aa~~L~~-~Gi~v~Vidlr~l~PlD~e~i---------------~~~~~~~~~~vvvvEe~~~~GG~G~~ 569 (616)
T 3mos_A 506 AGVTLHEALAAAELLKK-EKINIRVLDPFTIKPLDRKLI---------------LDSARATKGRILTVEDHYYEGGIGEA 569 (616)
T ss_dssp CTHHHHHHHHHHHHHHT-TTCEEEEEECSEEESCCHHHH---------------HHHHHHTTTEEEEEEEEESTTSHHHH
T ss_pred eCHHHHHHHHHHHHHHh-cCCCEEEEEeCccCCCCHHHH---------------HHHHHhcCCEEEEEcCCCCCcCHHHH
Confidence 68888888888899988 699999999876432 1111 3556677 777776443 36888888
Q ss_pred HHHHHHh
Q 029532 78 FKAFLDA 84 (192)
Q Consensus 78 ~k~fld~ 84 (192)
+..++-.
T Consensus 570 v~~~l~~ 576 (616)
T 3mos_A 570 VSSAVVG 576 (616)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 8776644
No 107
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=34.84 E-value=49 Score=25.61 Aligned_cols=107 Identities=13% Similarity=0.096 Sum_probs=53.8
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH--hh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD--AT 85 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld--~~ 85 (192)
|...++..+.+ .|.+|.+++..... .+.+...+....+ ...+.+.++|.||+..|.. ..++..+. .+
T Consensus 42 mG~~~a~~l~~-~G~~V~~~dr~~~~-~~~l~~~g~~~~~----~~~e~~~~aDvVi~~vp~~-----~~~~~v~~~~~~ 110 (320)
T 4dll_A 42 MGLPMARRLCE-AGYALQVWNRTPAR-AASLAALGATIHE----QARAAARDADIVVSMLENG-----AVVQDVLFAQGV 110 (320)
T ss_dssp THHHHHHHHHH-TTCEEEEECSCHHH-HHHHHTTTCEEES----SHHHHHTTCSEEEECCSSH-----HHHHHHHTTTCH
T ss_pred HHHHHHHHHHh-CCCeEEEEcCCHHH-HHHHHHCCCEeeC----CHHHHHhcCCEEEEECCCH-----HHHHHHHcchhH
Confidence 34456666666 48888888754311 1111111100000 1135578899999999853 34555553 22
Q ss_pred ccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 86 GGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 86 ~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
. ....+++.+ +.++ . ........+...+...|..++..+.
T Consensus 111 ~----~~l~~~~~v--i~~s-t---~~~~~~~~~~~~~~~~g~~~~~~pv 150 (320)
T 4dll_A 111 A----AAMKPGSLF--LDMA-S---ITPREARDHAARLGALGIAHLDTPV 150 (320)
T ss_dssp H----HHCCTTCEE--EECS-C---CCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred H----hhCCCCCEE--EecC-C---CCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 1 011234433 2222 1 1223345666677778888886543
No 108
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=34.71 E-value=15 Score=27.23 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=23.2
Q ss_pred hHhhh--CCEEEEeccccCCC-chHHHHHHHHhhcccc
Q 029532 55 NELAE--ADGFVFGFPTRFGM-MAAQFKAFLDATGGLW 89 (192)
Q Consensus 55 ~~l~~--aD~ii~gsP~y~g~-~~~~~k~fld~~~~~~ 89 (192)
..+.+ ||.+|+|+|++... +...++.+.+.+..+|
T Consensus 183 ~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~~~~ 220 (221)
T 3exr_A 183 KLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKRIW 220 (221)
T ss_dssp GGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHHHHh
Confidence 34444 78999999999754 5455666666654433
No 109
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=34.63 E-value=20 Score=26.16 Aligned_cols=45 Identities=11% Similarity=0.040 Sum_probs=28.4
Q ss_pred hhHhh--hCCEEEE-eccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEec
Q 029532 54 PNELA--EADGFVF-GFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST 105 (192)
Q Consensus 54 ~~~l~--~aD~ii~-gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~ 105 (192)
.+++. ++|+||+ |.+.+.....+.+..||.+.. -.||+++.++++
T Consensus 67 ~~~~~~~~~D~livpGG~~~~~~~~~~l~~~l~~~~-------~~gk~iaaiC~G 114 (212)
T 3efe_A 67 LDECTLESKDLLILPGGTTWSEEIHQPILERIGQAL-------KIGTIVAAICGA 114 (212)
T ss_dssp GGGCCCCTTCEEEECCCSCTTSGGGHHHHHHHHHHH-------HHTCEEEEETHH
T ss_pred HHHCCccCCCEEEECCCCccccccCHHHHHHHHHHH-------HCCCEEEEEcHH
Confidence 34544 8999998 333333345677788887763 256777766653
No 110
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=34.24 E-value=68 Score=20.69 Aligned_cols=47 Identities=13% Similarity=0.173 Sum_probs=26.4
Q ss_pred HHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccc
Q 029532 6 EKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPT 69 (192)
Q Consensus 6 ~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~ 69 (192)
+...+.+.+.+.+ .|++++..-... .+.+.+ .+...++|.||+|+.-
T Consensus 65 ~~~l~~~~~~~~~-~g~~~~~~v~~g-~~~~~I---------------~~~a~~~dliV~G~~~ 111 (138)
T 3idf_A 65 KLLTQKFSTFFTE-KGINPFVVIKEG-EPVEMV---------------LEEAKDYNLLIIGSSE 111 (138)
T ss_dssp HHHHHHHHHHHHT-TTCCCEEEEEES-CHHHHH---------------HHHHTTCSEEEEECCT
T ss_pred HHHHHHHHHHHHH-CCCCeEEEEecC-ChHHHH---------------HHHHhcCCEEEEeCCC
Confidence 3444555566655 477665443333 232222 2334499999999864
No 111
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=34.17 E-value=30 Score=26.15 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=23.3
Q ss_pred HhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEe-ccc
Q 029532 14 KGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFG-FPT 69 (192)
Q Consensus 14 ~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~g-sP~ 69 (192)
+.+++ .|++++++++....+ ..+++.++|+||+. .|.
T Consensus 22 ~~l~~-~G~~v~v~~~~~~~~------------------~p~~~~~~d~lIl~GGp~ 59 (250)
T 3m3p_A 22 DFLAG-EHIPFQVLRMDRSDP------------------LPAEIRDCSGLAMMGGPM 59 (250)
T ss_dssp HHHHH-TTCCEEEEEGGGTCC------------------CCSCGGGSSEEEECCCSS
T ss_pred HHHHH-CCCeEEEEeccCCCc------------------CcCccccCCEEEECCCCC
Confidence 33455 488888888754210 12467889998884 553
No 112
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=33.79 E-value=48 Score=25.20 Aligned_cols=79 Identities=18% Similarity=0.132 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChh------HhhhCCEEEEeccccCCCchHHH
Q 029532 5 VEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPN------ELAEADGFVFGFPTRFGMMAAQF 78 (192)
Q Consensus 5 T~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~aD~ii~gsP~y~g~~~~~~ 78 (192)
|..+++.+++...+.++++++++.-......+.... ..+ +=.+.|.+|+.|| |...|++-
T Consensus 16 ts~~idl~LDErAdRedI~vrv~gsGaKm~pe~~~~------------~~~~~~~~~~~~~pDfvI~isP--N~a~PGP~ 81 (283)
T 1qv9_A 16 TSMMMDMLLDERADREDVEFRVVGTSVKMDPECVEA------------AVEMALDIAEDFEPDFIVYGGP--NPAAPGPS 81 (283)
T ss_dssp HHHHTTGGGSTTSCCSSEEEEEEECTTCCSHHHHHH------------HHHHHHHHHHHHCCSEEEEECS--CTTSHHHH
T ss_pred hHHHHHHHHHhhhccCCceEEEeccCCCCCHHHHHH------------HHHHhhhhhhhcCCCEEEEECC--CCCCCCch
Confidence 344555555554443577788777554332221100 012 2348999999999 68888886
Q ss_pred HHHHHhhccccccCCCCCCcEEEEEec
Q 029532 79 KAFLDATGGLWRTQQLAGKPAGMFYST 105 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~s~ 105 (192)
+. =+.+ .-+|+|+.+++-.
T Consensus 82 ~A-RE~l-------~~~~iP~IvI~D~ 100 (283)
T 1qv9_A 82 KA-REML-------ADSEYPAVIIGDA 100 (283)
T ss_dssp HH-HHHH-------HTSSSCEEEEEEG
T ss_pred HH-HHHH-------HhCCCCEEEEcCC
Confidence 53 1222 2378898777664
No 113
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=31.77 E-value=1.1e+02 Score=20.51 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhccccCCceeEEEEcCC
Q 029532 4 HVEKLAEEIKKGASSVEGVEAKLWQVPE 31 (192)
Q Consensus 4 nT~~la~~i~~~l~~~~g~ev~~~~l~~ 31 (192)
+++.+++.+.+-++. .+.++.++.+.+
T Consensus 37 ~s~~al~~A~~la~~-~~a~l~llhV~~ 63 (155)
T 3dlo_A 37 RAERVLRFAAEEARL-RGVPVYVVHSLP 63 (155)
T ss_dssp HHHHHHHHHHHHHHH-HTCCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHh-cCCEEEEEEEEc
Confidence 344555555554444 355666665543
No 114
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=31.64 E-value=37 Score=25.11 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=16.2
Q ss_pred hhHhhhCCEEEEeccccCCCchHHHHHH
Q 029532 54 PNELAEADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
.+.|.+||+|+|.= |+....|+.+
T Consensus 74 ~~~l~~ad~I~lpG----G~~~~~~~~l 97 (229)
T 1fy2_A 74 LAAIEKAEIIIVGG----GNTFQLLKES 97 (229)
T ss_dssp HHHHHHCSEEEECC----SCHHHHHHHH
T ss_pred HHHHhcCCEEEECC----CcHHHHHHHH
Confidence 38899999999974 4444444433
No 115
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=30.80 E-value=99 Score=25.82 Aligned_cols=108 Identities=12% Similarity=0.214 Sum_probs=54.6
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCC-CCCChhH-hhh---CCEEEEeccccCCCchHHHHHHH
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDV-PIITPNE-LAE---ADGFVFGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~-l~~---aD~ii~gsP~y~g~~~~~~k~fl 82 (192)
|...++..+.+ .|.+|.+++............... .... .....++ +.+ +|.||+..|.. ..++..+
T Consensus 21 MG~~lA~~La~-~G~~V~v~dr~~~~~~~l~~~~~~--~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~-----~~v~~vl 92 (497)
T 2p4q_A 21 MGQNLILNAAD-HGFTVCAYNRTQSKVDHFLANEAK--GKSIIGATSIEDFISKLKRPRKVMLLVKAG-----APVDALI 92 (497)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSSSHHHHHHHHTTTT--TSSEECCSSHHHHHHTSCSSCEEEECCCSS-----HHHHHHH
T ss_pred HHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHccccc--CCCeEEeCCHHHHHhcCCCCCEEEEEcCCh-----HHHHHHH
Confidence 55566677766 588998887654211112110000 0000 0012333 334 99999999974 3567777
Q ss_pred HhhccccccCCCC-CCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC
Q 029532 83 DATGGLWRTQQLA-GKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 83 d~~~~~~~~~~l~-gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~ 134 (192)
+.+.+ .++ |+. +...+.. . ......+...+...|+.+++.+
T Consensus 93 ~~l~~-----~l~~g~i---IId~s~~--~-~~~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 93 NQIVP-----LLEKGDI---IIDGGNS--H-FPDSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp HHHGG-----GCCTTCE---EEECSCC--C-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHH-----hCCCCCE---EEECCCC--C-hhHHHHHHHHHHHcCCceeCCC
Confidence 77642 233 443 2222221 2 2223345556666787776543
No 116
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=30.45 E-value=96 Score=26.95 Aligned_cols=15 Identities=33% Similarity=0.295 Sum_probs=10.8
Q ss_pred HhhhCCEEEE-ecccc
Q 029532 56 ELAEADGFVF-GFPTR 70 (192)
Q Consensus 56 ~l~~aD~ii~-gsP~y 70 (192)
++.++|+||| |.|--
T Consensus 483 ~~~~~DgIIlsGGPg~ 498 (645)
T 3r75_A 483 DLARYDVVVMGPGPGD 498 (645)
T ss_dssp CGGGCSEEEECCCSSC
T ss_pred cccCCCEEEECCCCCC
Confidence 4568999999 55543
No 117
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=29.67 E-value=34 Score=24.30 Aligned_cols=79 Identities=18% Similarity=-0.040 Sum_probs=40.3
Q ss_pred HHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChh--HhhhCCEEEEec--cccCCCchHHHHHHHHhhcc
Q 029532 12 IKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPN--ELAEADGFVFGF--PTRFGMMAAQFKAFLDATGG 87 (192)
Q Consensus 12 i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~aD~ii~gs--P~y~g~~~~~~k~fld~~~~ 87 (192)
..+.+++ .|++|+++...... +....+.....| ...+ +..++|+||+-- ......-.+.+..|+.+..
T Consensus 27 p~~~l~~-ag~~V~~~s~~~~~---v~~~~G~~v~~d---~~l~~v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~- 98 (177)
T 4hcj_A 27 SKKIFES-AGYKTKVSSTFIGT---AQGKLGGMTNID---LLFSEVDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFL- 98 (177)
T ss_dssp HHHHHHH-TTCEEEEEESSSEE---EEETTSCEEEEC---EEGGGCCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHH-
T ss_pred HHHHHHH-CCCEEEEEECCCCe---EeeCCCCEEecC---ccHHHCCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHH-
Confidence 3455667 59999998865420 100000000111 1123 356899999841 1112222466777777763
Q ss_pred ccccCCCCCCcEEEEEe
Q 029532 88 LWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 88 ~~~~~~l~gK~~~~~~s 104 (192)
-.||+++.+|+
T Consensus 99 ------~~~k~iaaIC~ 109 (177)
T 4hcj_A 99 ------DNQKIVAGIGS 109 (177)
T ss_dssp ------HTTCEEEEETT
T ss_pred ------HhCCEEEEecc
Confidence 25677766654
No 118
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=29.01 E-value=1.3e+02 Score=23.67 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=32.0
Q ss_pred eccccCCC--chHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 66 GFPTRFGM--MAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 66 gsP~y~g~--~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
..|++|+. ...|...++|.+.-.-..+.++|+++++++-. . .....+...+...|+.+.
T Consensus 123 ~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~-----~--~va~Sl~~~~~~~G~~v~ 183 (321)
T 1oth_A 123 SIPIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG-----N--NILHSIMMSAAKFGMHLQ 183 (321)
T ss_dssp SSCEEESCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCS-----S--HHHHHHHTTTGGGTCEEE
T ss_pred CCCEEcCCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCc-----h--hhHHHHHHHHHHcCCeEE
Confidence 46777743 22445556665531101246889998876542 1 233445555556677664
No 119
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=28.94 E-value=86 Score=24.69 Aligned_cols=67 Identities=12% Similarity=0.282 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHhccccC-CceeEEEEcCCCCC--HHHhcccCCCCCCCCCCCChhHhhhCCEEEEec-cccCCCchHH
Q 029532 2 YGHVEKLAEEIKKGASSVE-GVEAKLWQVPETLP--EEVLGKMSAPPKSDVPIITPNELAEADGFVFGF-PTRFGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~-g~ev~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gs-P~y~g~~~~~ 77 (192)
+|++-..|.++++.+++ . |++++++++....| .+.+ .+.+..++.||+.- ....|++-..
T Consensus 227 ~G~~~~~a~~Aa~~L~~-~~Gi~v~vi~~~~l~P~d~~~i---------------~~~~~~~~~vv~vEe~~~~gg~g~~ 290 (342)
T 2bfd_B 227 WGTQVHVIREVASMAKE-KLGVSCEVIDLRTIIPWDVDTI---------------CKSVIKTGRLLISHEAPLTGGFASE 290 (342)
T ss_dssp CTTHHHHHHHHHHHHHH-HHCCCEEEEECCEEESCCHHHH---------------HHHHHHHSCEEEEEEEESTTCHHHH
T ss_pred ECHHHHHHHHHHHHHHh-hcCCCEEEEeeeecCCCCHHHH---------------HHHHhcCCEEEEEEeCccCCcHHHH
Confidence 57888888888888877 6 88999999876422 1111 24455555555442 2235666666
Q ss_pred HHHHHHh
Q 029532 78 FKAFLDA 84 (192)
Q Consensus 78 ~k~fld~ 84 (192)
+..++..
T Consensus 291 v~~~l~~ 297 (342)
T 2bfd_B 291 ISSTVQE 297 (342)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666644
No 120
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=28.70 E-value=1.4e+02 Score=24.55 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=21.9
Q ss_pred CCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 94 LAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 94 l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
++|+++++++.+.-..|........+...+...|+.+.
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~ 223 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVV 223 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEE
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEE
Confidence 67889888864322212212334456666677788765
No 121
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=27.77 E-value=64 Score=22.70 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhccccCCc-eeEEEEcCCC
Q 029532 5 VEKLAEEIKKGASSVEGV-EAKLWQVPET 32 (192)
Q Consensus 5 T~~la~~i~~~l~~~~g~-ev~~~~l~~~ 32 (192)
|++|.+-..+.+++ .|+ +++++.++..
T Consensus 32 ~~~Ll~gA~~~l~~-~G~~~i~v~~VPGa 59 (160)
T 2c92_A 32 CDALLDGARKVAAG-CGLDDPTVVRVLGA 59 (160)
T ss_dssp HHHHHHHHHHHHHH-TTCSCCEEEEESSG
T ss_pred HHHHHHHHHHHHHH-cCCCceEEEECCcH
Confidence 56788888888877 477 7888888764
No 122
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=27.72 E-value=1.9e+02 Score=21.51 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=51.7
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH---h
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD---A 84 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld---~ 84 (192)
|...++..+.+ .|.+|.+++ ........... +... .....+.+.++|.||+.+|.. ..++..+. .
T Consensus 14 ~G~~~a~~l~~-~g~~V~~~~-~~~~~~~~~~~-g~~~----~~~~~~~~~~~D~vi~~vp~~-----~~~~~v~~~~~~ 81 (295)
T 1yb4_A 14 MGSPMAINLAR-AGHQLHVTT-IGPVADELLSL-GAVN----VETARQVTEFADIIFIMVPDT-----PQVEDVLFGEHG 81 (295)
T ss_dssp THHHHHHHHHH-TTCEEEECC-SSCCCHHHHTT-TCBC----CSSHHHHHHTCSEEEECCSSH-----HHHHHHHHSTTS
T ss_pred HHHHHHHHHHh-CCCEEEEEc-CHHHHHHHHHc-CCcc----cCCHHHHHhcCCEEEEECCCH-----HHHHHHHhCchh
Confidence 34455666656 488888877 54322222211 1000 001134578999999999864 24566665 3
Q ss_pred hccccccCCCC-CCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecC
Q 029532 85 TGGLWRTQQLA-GKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 85 ~~~~~~~~~l~-gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
+. ..++ ++.+ +..+ . + .......+...+...|..++..
T Consensus 82 l~-----~~l~~~~~v--v~~s-~--~-~~~~~~~l~~~~~~~g~~~~~~ 120 (295)
T 1yb4_A 82 CA-----KTSLQGKTI--VDMS-S--I-SPIETKRFAQRVNEMGADYLDA 120 (295)
T ss_dssp ST-----TSCCTTEEE--EECS-C--C-CHHHHHHHHHHHHTTTEEEEEC
T ss_pred Hh-----hcCCCCCEE--EECC-C--C-CHHHHHHHHHHHHHcCCeEEEc
Confidence 32 1232 3322 2222 1 1 1223445666666667776644
No 123
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=27.65 E-value=1e+02 Score=21.75 Aligned_cols=94 Identities=7% Similarity=-0.009 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHhcc-ccCCceeEEEEcCCC-CCHHHhcccCC--CCCCCCCC--CChhHhhhCCEEEEeccccCCCchH
Q 029532 3 GHVEKLAEEIKKGAS-SVEGVEAKLWQVPET-LPEEVLGKMSA--PPKSDVPI--ITPNELAEADGFVFGFPTRFGMMAA 76 (192)
Q Consensus 3 GnT~~la~~i~~~l~-~~~g~ev~~~~l~~~-~~~~~~~~~~~--~~~~~~~~--~~~~~l~~aD~ii~gsP~y~g~~~~ 76 (192)
|-|-.+...+++.+. + .|++|..+.-... ........... ...-|+.+ ...+.+...|.||...... ++.
T Consensus 12 Gasg~iG~~~~~~l~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~--n~~- 87 (221)
T 3r6d_A 12 GAAGQIAQXLTATLLTY-TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES--GSD- 87 (221)
T ss_dssp STTSHHHHHHHHHHHHH-CCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC--HHH-
T ss_pred eCCcHHHHHHHHHHHhc-CCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC--Chh-
Confidence 555667777877776 6 5888887764321 11111000000 01122221 1234567889999887643 222
Q ss_pred HHHHHHHhhccccccCCCCCCcEEEEEecCC
Q 029532 77 QFKAFLDATGGLWRTQQLAGKPAGMFYSTGS 107 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~ 107 (192)
.+.+++.+. ....+++..+++.+.
T Consensus 88 -~~~~~~~~~------~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 88 -MASIVKALS------RXNIRRVIGVSMAGL 111 (221)
T ss_dssp -HHHHHHHHH------HTTCCEEEEEEETTT
T ss_pred -HHHHHHHHH------hcCCCeEEEEeecee
Confidence 777887774 123345655665543
No 124
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=26.70 E-value=1.5e+02 Score=22.77 Aligned_cols=59 Identities=12% Similarity=0.083 Sum_probs=32.7
Q ss_pred HHHHHHHhccccCCc-eeEEEEcCC-CCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccC
Q 029532 8 LAEEIKKGASSVEGV-EAKLWQVPE-TLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRF 71 (192)
Q Consensus 8 la~~i~~~l~~~~g~-ev~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~ 71 (192)
|...++..+.+ .|. +|.+++... ....+.....+....+ ...+.+.++|.||+..|...
T Consensus 35 mG~~~A~~L~~-~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~----~~~e~~~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 35 AASAIASGLRQ-AGAIDMAAYDAASAESWRPRAEELGVSCKA----SVAEVAGECDVIFSLVTAQA 95 (312)
T ss_dssp HHHHHHHHHHH-HSCCEEEEECSSCHHHHHHHHHHTTCEECS----CHHHHHHHCSEEEECSCTTT
T ss_pred HHHHHHHHHHH-CCCCeEEEEcCCCCHHHHHHHHHCCCEEeC----CHHHHHhcCCEEEEecCchh
Confidence 45566677766 488 888888642 1111111111110000 11355789999999999864
No 125
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.52 E-value=67 Score=24.65 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=54.9
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH--hh
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD--AT 85 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld--~~ 85 (192)
|...++..+.+ .|.+|.+++........... .+....+ ...+.+.++|.||+..|.. ..++..+. .+
T Consensus 20 mG~~~A~~l~~-~G~~V~~~dr~~~~~~~~~~-~g~~~~~----~~~e~~~~aDvVi~~vp~~-----~~~~~v~~~~~l 88 (306)
T 3l6d_A 20 MGTIMAQVLLK-QGKRVAIWNRSPGKAAALVA-AGAHLCE----SVKAALSASPATIFVLLDN-----HATHEVLGMPGV 88 (306)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSSHHHHHHHHH-HTCEECS----SHHHHHHHSSEEEECCSSH-----HHHHHHHTSTTH
T ss_pred HHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHH-CCCeecC----CHHHHHhcCCEEEEEeCCH-----HHHHHHhcccch
Confidence 55667777766 58899888754321111111 0100000 1135578899999999953 34565554 22
Q ss_pred ccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 86 GGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 86 ~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
. ...+|+.+ +-++.... . ....+...+...|..+++.+.
T Consensus 89 ~-----~~~~g~iv--id~st~~~-~---~~~~l~~~~~~~g~~~vdapv 127 (306)
T 3l6d_A 89 A-----RALAHRTI--VDYTTNAQ-D---EGLALQGLVNQAGGHYVKGMI 127 (306)
T ss_dssp H-----HHTTTCEE--EECCCCCT-T---HHHHHHHHHHHTTCEEEEEEE
T ss_pred h-----hccCCCEE--EECCCCCH-H---HHHHHHHHHHHcCCeEEeccc
Confidence 1 12345543 22222211 1 233566667778888876433
No 126
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.24 E-value=1.1e+02 Score=21.33 Aligned_cols=97 Identities=10% Similarity=0.020 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCc---hHHH
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMM---AAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~---~~~~ 78 (192)
+|-|-.+...+++.|.+ .|.+|..+.-.... .......-....-|+.+...+.+...|.||.......... ....
T Consensus 6 tGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~ 83 (221)
T 3ew7_A 6 IGATGRAGSRILEEAKN-RGHEVTAIVRNAGK-ITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSL 83 (221)
T ss_dssp ETTTSHHHHHHHHHHHH-TTCEEEEEESCSHH-HHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHHHHH
T ss_pred EcCCchhHHHHHHHHHh-CCCEEEEEEcCchh-hhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHHHHH
Confidence 35555677788888877 58888877643210 0111000000111221111267889999998876643322 2455
Q ss_pred HHHHHhhccccccCCCCCCcEEEEEecC
Q 029532 79 KAFLDATGGLWRTQQLAGKPAGMFYSTG 106 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~s~g 106 (192)
+++++.+. ....+++..++|.+
T Consensus 84 ~~l~~a~~------~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 84 DHLISVLN------GTVSPRLLVVGGAA 105 (221)
T ss_dssp HHHHHHHC------SCCSSEEEEECCCC
T ss_pred HHHHHHHH------hcCCceEEEEecce
Confidence 77887774 22345565555543
No 127
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=26.20 E-value=81 Score=21.02 Aligned_cols=13 Identities=15% Similarity=0.245 Sum_probs=10.7
Q ss_pred hhCCEEEEecccc
Q 029532 58 AEADGFVFGFPTR 70 (192)
Q Consensus 58 ~~aD~ii~gsP~y 70 (192)
.++|.||+|+.-.
T Consensus 119 ~~~dlIV~G~~g~ 131 (162)
T 1mjh_A 119 EGVDIIIMGSHGK 131 (162)
T ss_dssp TTCSEEEEESCCS
T ss_pred cCCCEEEEcCCCC
Confidence 3899999998754
No 128
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=25.64 E-value=53 Score=25.47 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=11.9
Q ss_pred hhHhhhCCEEEEec
Q 029532 54 PNELAEADGFVFGF 67 (192)
Q Consensus 54 ~~~l~~aD~ii~gs 67 (192)
.+.|.++|+|+|+-
T Consensus 105 ~~~l~~ad~I~v~G 118 (291)
T 3en0_A 105 RLFVEQCTGIFMTG 118 (291)
T ss_dssp HHHHHHCSEEEECC
T ss_pred HHHHhcCCEEEECC
Confidence 46899999999974
No 129
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=25.47 E-value=1.7e+02 Score=20.30 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhh--hCCEEEEe-cc
Q 029532 3 GHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELA--EADGFVFG-FP 68 (192)
Q Consensus 3 GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aD~ii~g-sP 68 (192)
+|+..+++.+ ++ .|++++++.... ..+++. ++|+||+. .|
T Consensus 11 ~~~~~~~~~l----~~-~G~~~~~~~~~~---------------------~~~~~~~~~~dglil~Gg~ 53 (189)
T 1wl8_A 11 QYVHRIWRTL----RY-LGVETKIIPNTT---------------------PLEEIKAMNPKGIIFSGGP 53 (189)
T ss_dssp TTHHHHHHHH----HH-TTCEEEEEETTC---------------------CHHHHHHTCCSEEEECCCS
T ss_pred chHHHHHHHH----HH-CCCeEEEEECCC---------------------ChHHhcccCCCEEEECCCC
Confidence 4555444444 44 488888887543 134555 49999985 45
No 130
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=25.34 E-value=1.4e+02 Score=21.29 Aligned_cols=69 Identities=16% Similarity=0.072 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHhccccCCceeEEEEcCCCCCHHHhcccC-CCCCCCCCCCChhHhhhCCEEEEeccccC
Q 029532 2 YGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMS-APPKSDVPIITPNELAEADGFVFGFPTRF 71 (192)
Q Consensus 2 ~GnT~~la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aD~ii~gsP~y~ 71 (192)
+|-|-.+...+++.+.+ .|.+|..+.-............- ....-|+.+...+.+...|+||..+....
T Consensus 27 tGatG~iG~~l~~~L~~-~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 27 VGANGKVARYLLSELKN-KGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp ETTTSHHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCT
T ss_pred ECCCChHHHHHHHHHHh-CCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCC
Confidence 35566677888888877 58888887654321111111000 00111222234567889999998877553
No 131
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=24.97 E-value=28 Score=28.09 Aligned_cols=13 Identities=31% Similarity=0.613 Sum_probs=11.6
Q ss_pred hhhCCEEEEeccc
Q 029532 57 LAEADGFVFGFPT 69 (192)
Q Consensus 57 l~~aD~ii~gsP~ 69 (192)
-..+||||++|||
T Consensus 244 ~~~aDGlIVSTPT 256 (365)
T 3pfn_A 244 TVQGDGVIVSTPT 256 (365)
T ss_dssp EECSSEEEEECGG
T ss_pred EEecCeEEEeCCc
Confidence 3579999999998
No 132
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=24.85 E-value=39 Score=23.39 Aligned_cols=18 Identities=28% Similarity=0.170 Sum_probs=9.9
Q ss_pred ccCCCchHHHHHHHHhhc
Q 029532 69 TRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 69 ~y~g~~~~~~k~fld~~~ 86 (192)
.|+++|+..||.||+.+.
T Consensus 15 ~~~~~m~~~Lq~~L~~ll 32 (143)
T 3cpt_A 15 LYFQGSADDLKRFLYKKL 32 (143)
T ss_dssp -------CHHHHHHHHHG
T ss_pred hhhhhhHHHHHHHHHHHH
Confidence 589999999999998875
No 133
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=24.65 E-value=91 Score=20.21 Aligned_cols=13 Identities=31% Similarity=0.332 Sum_probs=10.9
Q ss_pred hhCCEEEEecccc
Q 029532 58 AEADGFVFGFPTR 70 (192)
Q Consensus 58 ~~aD~ii~gsP~y 70 (192)
.++|.||+|+.-.
T Consensus 107 ~~~dliV~G~~~~ 119 (146)
T 3s3t_A 107 PEIDLIVLGATGT 119 (146)
T ss_dssp TTCCEEEEESCCS
T ss_pred cCCCEEEECCCCC
Confidence 6899999998754
No 134
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=24.57 E-value=95 Score=20.10 Aligned_cols=12 Identities=33% Similarity=0.326 Sum_probs=10.3
Q ss_pred hCCEEEEecccc
Q 029532 59 EADGFVFGFPTR 70 (192)
Q Consensus 59 ~aD~ii~gsP~y 70 (192)
++|.||+|+.-.
T Consensus 110 ~~dliV~G~~~~ 121 (147)
T 3hgm_A 110 ECDLVVIGAQGT 121 (147)
T ss_dssp TCSEEEECSSCT
T ss_pred CCCEEEEeCCCC
Confidence 899999998753
No 135
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=24.53 E-value=1.4e+02 Score=19.91 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=39.9
Q ss_pred hhHhhhCCEEEEeccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEec-CCCCCChHHHHHHHHHHHHHcCCEEec
Q 029532 54 PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST-GSQGGGQETTALTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~-g~~~g~~~~~l~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+..-.-...-...++.++..+.. ....+.++.++++= .-.... ......+...+...++.++.
T Consensus 79 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~~----~~~~~~p~i~v~nK~Dl~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (181)
T 2efe_B 79 PMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA----QGNPNMVMALAGNKSDLLDAR-KVTAEDAQTYAQENGLFFME 153 (181)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEECTTCTTTC-CSCHHHHHHHHHHTTCEEEE
T ss_pred HHHhccCCEEEEEEECCCHHHHHHHHHHHHHHHH----hcCCCCcEEEEEECCcccccc-cCCHHHHHHHHHHcCCEEEE
Confidence 4568889999998665443333456666666541 12246677766663 221111 11123455555566765543
No 136
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=24.38 E-value=2.2e+02 Score=21.95 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=40.8
Q ss_pred CCEEEEeccccCCCchHHHHHH-----------------------HHhhccccccCCCCCCcEEEEEecCCCCCC----h
Q 029532 60 ADGFVFGFPTRFGMMAAQFKAF-----------------------LDATGGLWRTQQLAGKPAGMFYSTGSQGGG----Q 112 (192)
Q Consensus 60 aD~ii~gsP~y~g~~~~~~k~f-----------------------ld~~~~~~~~~~l~gK~~~~~~s~g~~~g~----~ 112 (192)
-|.||+-+|.|.+.....+..- +|.+ ...+..++.+++.+-..+.|+ .
T Consensus 128 ~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l-----~~~l~~~~~~v~~~p~np~g~~~~~~ 202 (406)
T 4adb_A 128 KSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSA-----SALIDDSTCAVIVEPIQGEGGVVPAS 202 (406)
T ss_dssp CCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHH-----HTTCSTTEEEEEECSEETTTTSEECC
T ss_pred CcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHH-----HHHhcCCeEEEEEeCCcCCCCCccCC
Confidence 3889999999998865433210 1111 123445666666553222233 3
Q ss_pred HHHHHHHHHHHHHcCCEEecC
Q 029532 113 ETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 113 ~~~l~~~~~~l~~~g~~vv~~ 133 (192)
...++.+.+.+..+|..++-.
T Consensus 203 ~~~l~~l~~l~~~~~~~li~D 223 (406)
T 4adb_A 203 NAFLQGLRELCNRHNALLIFD 223 (406)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEe
Confidence 445778888888888877744
No 137
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=23.99 E-value=1.3e+02 Score=20.93 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhccccCCceeEEEEcCCC
Q 029532 5 VEKLAEEIKKGASSVEGVEAKLWQVPET 32 (192)
Q Consensus 5 T~~la~~i~~~l~~~~g~ev~~~~l~~~ 32 (192)
|++|.+-..+.+.+ .|.+++++.++..
T Consensus 27 ~~~Ll~gA~~~l~~-~G~~i~v~~VPGa 53 (157)
T 2i0f_A 27 ADALLDGAKAALDE-AGATYDVVTVPGA 53 (157)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEEEESSG
T ss_pred HHHHHHHHHHHHHH-cCCCeEEEECCcH
Confidence 56777778888877 4788888888775
No 138
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=23.84 E-value=42 Score=24.01 Aligned_cols=43 Identities=9% Similarity=-0.094 Sum_probs=24.1
Q ss_pred HhhhCCEEEEe--cc-ccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEe
Q 029532 56 ELAEADGFVFG--FP-TRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 56 ~l~~aD~ii~g--sP-~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s 104 (192)
...++|+||+- .| .+.-.-.+.+..|+.+.. .-.+|+++.++.
T Consensus 70 ~~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~------~~~~k~iaaiC~ 115 (194)
T 4gdh_A 70 FAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFY------KKPNKWIGMICA 115 (194)
T ss_dssp HHHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHT------TCTTCEEEEEGG
T ss_pred ccccCCEEEECCCchhHhHhhhCHHHHHHHHHhh------hcCCceEEeecc
Confidence 46789999993 22 222223456666666542 123567766654
No 139
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=23.81 E-value=1.2e+02 Score=24.05 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=40.2
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCC----CCCCCCCC-----CC-hhHhhhCCEEEEeccccCCCchHH
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA----PPKSDVPI-----IT-PNELAEADGFVFGFPTRFGMMAAQ 77 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~----~~~~~~~~-----~~-~~~l~~aD~ii~gsP~y~g~~~~~ 77 (192)
+...++..+.+ .|.+|.+++..+.. .+.+...+. .+...++. .. .+.+.++|.||++.|.+ .
T Consensus 40 mG~alA~~La~-~G~~V~l~~r~~~~-~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp~~------~ 111 (356)
T 3k96_A 40 WGTALALVLAR-KGQKVRLWSYESDH-VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSF------A 111 (356)
T ss_dssp HHHHHHHHHHT-TTCCEEEECSCHHH-HHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCCHH------H
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHH-HHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCCHH------H
Confidence 44566777766 58899988754321 111111110 01111111 12 24678999999999985 5
Q ss_pred HHHHHHhhc
Q 029532 78 FKAFLDATG 86 (192)
Q Consensus 78 ~k~fld~~~ 86 (192)
++..++.+.
T Consensus 112 ~~~vl~~i~ 120 (356)
T 3k96_A 112 FHEVITRMK 120 (356)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 777777775
No 140
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=23.54 E-value=27 Score=25.92 Aligned_cols=58 Identities=10% Similarity=-0.053 Sum_probs=32.7
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCC--------------CHHHhcccCCCCCCCCCCCChhHhhhCCEEEEecccc
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETL--------------PEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTR 70 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 70 (192)
|...++..+.+ .|.+|.+++..... ........... ......+.+.++|.||+..|..
T Consensus 30 mG~alA~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~aDvVilavp~~ 101 (245)
T 3dtt_A 30 VGRTMAGALAD-LGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHV----HLAAFADVAAGAELVVNATEGA 101 (245)
T ss_dssp HHHHHHHHHHH-TTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTC----EEEEHHHHHHHCSEEEECSCGG
T ss_pred HHHHHHHHHHH-CCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCce----eccCHHHHHhcCCEEEEccCcH
Confidence 56677777777 58899888754311 00001000000 0001135678999999999986
No 141
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.49 E-value=27 Score=23.34 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=32.4
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCC-CCCCC--CCCC-hhHhhhCCEEEEecccc
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAP-PKSDV--PIIT-PNELAEADGFVFGFPTR 70 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~-~~~~~--~~~~-~~~l~~aD~ii~gsP~y 70 (192)
+...+++.|.+ .|.+|.+++..... .+.....+.. ...|. ++.. ...+.++|.+|+.+|.-
T Consensus 18 ~G~~la~~L~~-~g~~v~vid~~~~~-~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 18 VGSLLGEKLLA-SDIPLVVIETSRTR-VDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp HHHHHHHHHHH-TTCCEEEEESCHHH-HHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred HHHHHHHHHHH-CCCCEEEEECCHHH-HHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 45566677766 58899999865321 1111111111 11111 1111 12467899999999874
No 142
>3a9s_A D-arabinose isomerase; rossmann fold, beta barrel, carbohydrate metabolism, cytoplasm, fucose metabolism, manganese, metal- binding; 1.60A {Geobacillus pallidus} PDB: 3a9r_A 3a9t_A*
Probab=22.90 E-value=68 Score=27.69 Aligned_cols=56 Identities=9% Similarity=0.018 Sum_probs=30.7
Q ss_pred hCCEEEEeccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCE
Q 029532 59 EADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMI 129 (192)
Q Consensus 59 ~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~ 129 (192)
+.|++|+.+|+|.++-. .+. .-.+.|+.+.+.-+....+. -.+......|.+.|+.
T Consensus 84 ~vd~ii~~~~~w~yg~e--------t~~------~~~~~Pvllw~~~~~e~pG~-~gl~a~~~~l~q~Gip 139 (595)
T 3a9s_A 84 GVGVSITVTPCWCYGTE--------TMD------MDPHIPKAVWGFNGTERPGA-VYLAAVLAGYNQKGLP 139 (595)
T ss_dssp TEEEEEEEESSCCCGGG--------TCC------CCTTSCEEEEECCCSSSCHH-HHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeccCCCHHH--------HHh------hcCCCCEEEEeCCCCCCcch-hHHHHHHHHHHHcCCc
Confidence 55899999999877511 111 11267777776654222222 2334455556666654
No 143
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=22.80 E-value=68 Score=23.23 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=10.0
Q ss_pred hhHhhhCCEEEEe
Q 029532 54 PNELAEADGFVFG 66 (192)
Q Consensus 54 ~~~l~~aD~ii~g 66 (192)
.+++.++|+|||.
T Consensus 49 ~~~l~~~DglIl~ 61 (212)
T 2a9v_A 49 SSELDGLDGLVLS 61 (212)
T ss_dssp GGGGTTCSEEEEE
T ss_pred HHHHhCCCEEEEC
Confidence 3667779999984
No 144
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=22.80 E-value=1.3e+02 Score=24.90 Aligned_cols=108 Identities=12% Similarity=0.209 Sum_probs=52.1
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCC-CCChhHh----hhCCEEEEeccccCCCchHHHHHHH
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVP-IITPNEL----AEADGFVFGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l----~~aD~ii~gsP~y~g~~~~~~k~fl 82 (192)
|...++..+.+ .|.+|.+++.............. . ..... ....+++ .++|.||+..|... .++..+
T Consensus 13 mG~~lA~~La~-~G~~V~v~dr~~~~~~~l~~~~~-~-g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~-----~v~~vl 84 (482)
T 2pgd_A 13 MGQNLILNMND-HGFVVCAFNRTVSKVDDFLANEA-K-GTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ-----AVDNFI 84 (482)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSSTHHHHHHHHTTT-T-TSSCEECSSHHHHHHHBCSSCEEEECSCTTH-----HHHHHH
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHhccc-c-CCCeEEeCCHHHHHhhccCCCEEEEeCCChH-----HHHHHH
Confidence 45566666666 48888888754321111111000 0 00110 0123444 38999999999752 455566
Q ss_pred HhhccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCC
Q 029532 83 DATGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 83 d~~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~ 134 (192)
+.+.+ .+ +|+.+ + ..+. +.......+...+...|+.+++.+
T Consensus 85 ~~l~~-----~l~~g~iI--I-~~s~---~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 85 EKLVP-----LLDIGDII--I-DGGN---SEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp HHHHH-----HCCTTCEE--E-ECSC---CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHh-----hcCCCCEE--E-ECCC---CCHHHHHHHHHHHHHcCCeEeCCC
Confidence 55531 23 34432 2 2222 112222345555666677776543
No 145
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=22.72 E-value=64 Score=23.88 Aligned_cols=14 Identities=21% Similarity=-0.138 Sum_probs=10.8
Q ss_pred hHhhhCCEEEEe-cc
Q 029532 55 NELAEADGFVFG-FP 68 (192)
Q Consensus 55 ~~l~~aD~ii~g-sP 68 (192)
+.+.++|+|||. .|
T Consensus 53 ~~l~~~Dglil~GG~ 67 (239)
T 1o1y_A 53 RPLEEYSLVVLLGGY 67 (239)
T ss_dssp SCGGGCSEEEECCCS
T ss_pred cchhcCCEEEECCCC
Confidence 567889999986 44
No 146
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=22.18 E-value=1.4e+02 Score=20.02 Aligned_cols=74 Identities=7% Similarity=0.046 Sum_probs=38.8
Q ss_pred hhHhhhCCEEEEeccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEec-CCCCCChHHHHHHHHHHHHHcCCEEec
Q 029532 54 PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST-GSQGGGQETTALTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~-g~~~g~~~~~l~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.|+..+.. ....+.++.++++= .-.... ..............++.++.
T Consensus 75 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~-~v~~~~~~~~~~~~~~~~~~ 149 (183)
T 2fu5_C 75 TAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE----HASADVEKMILGNKCDVNDKR-QVSKERGEKLALDYGIKFME 149 (183)
T ss_dssp CTTTTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEEC--CCSCC-CSCHHHHHHHHHHHTCEEEE
T ss_pred HHHHhcCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECccCCccC-cCCHHHHHHHHHHcCCeEEE
Confidence 3557789999998766543333455666666531 12346777777663 221110 11122344445566765543
No 147
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=22.13 E-value=1.4e+02 Score=20.08 Aligned_cols=13 Identities=31% Similarity=0.202 Sum_probs=11.1
Q ss_pred hhCCEEEEecccc
Q 029532 58 AEADGFVFGFPTR 70 (192)
Q Consensus 58 ~~aD~ii~gsP~y 70 (192)
.++|.||+|+.-.
T Consensus 118 ~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 118 EKADLLVVGNVGL 130 (163)
T ss_dssp TTCSEEEEECCCC
T ss_pred cCCCEEEECCCCC
Confidence 6799999999754
No 148
>2kdd_A Borealin; protein dimer, cell cycle, cell division, centromere, chromosomal protein, cytoplasm, mitosis, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=22.00 E-value=1.4e+02 Score=17.93 Aligned_cols=27 Identities=15% Similarity=0.135 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC
Q 029532 165 QPTELELEQAFHQGKHIAGIAKKLKGS 191 (192)
Q Consensus 165 ~p~~~~~~~~~~lg~~la~~~~~~~~~ 191 (192)
+.|++.+..++.|--|+++.+..+++.
T Consensus 49 ~Ld~eAl~nIk~Ls~rl~~~C~s~~~~ 75 (76)
T 2kdd_A 49 QLDPEALGNIKKLSNRLAQICSSIRTH 75 (76)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHSCSC
T ss_pred hcCHHHHHHHHHHHHHHHHHHhhhccC
Confidence 579999999999999999999887653
No 149
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=21.88 E-value=39 Score=24.51 Aligned_cols=45 Identities=7% Similarity=-0.028 Sum_probs=27.1
Q ss_pred hhHhhhCCEEEEeccccCC----CchHHHHHHHHhhccccccCCCCCCcEEEEEec
Q 029532 54 PNELAEADGFVFGFPTRFG----MMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST 105 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP~y~g----~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~ 105 (192)
.+++.++|.||+..-.-.. .-.+.+..|+.+.. -+||+++.++++
T Consensus 69 ~~~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~-------~~g~~iaaIC~G 117 (209)
T 3er6_A 69 WQSFDFTNILIIGSIGDPLESLDKIDPALFDWIRELH-------LKGSKIVAIDTG 117 (209)
T ss_dssp GGGCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHH-------HTTCEEEEETTH
T ss_pred ccccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHH-------hcCCEEEEEcHH
Confidence 4566789999984321111 12466777776653 256777776653
No 150
>1eze_A Cholesteryl ester transferase inhibitor protein; amphipathic helix; NMR {Synthetic} SCOP: j.39.1.1 PDB: 1opp_A
Probab=21.82 E-value=55 Score=17.12 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 029532 172 EQAFHQGKHIAGIAKK 187 (192)
Q Consensus 172 ~~~~~lg~~la~~~~~ 187 (192)
+++.++|..|+++++.
T Consensus 9 dkvke~g~tl~eK~k~ 24 (38)
T 1eze_A 9 DKLKEFGNTLEDKAWE 24 (38)
T ss_dssp HHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7899999999988864
No 151
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=21.50 E-value=97 Score=23.75 Aligned_cols=105 Identities=11% Similarity=0.024 Sum_probs=49.6
Q ss_pred HHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHH-Hhhcccc
Q 029532 11 EIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFL-DATGGLW 89 (192)
Q Consensus 11 ~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fl-d~~~~~~ 89 (192)
.++..|.+ .|.+|..+|....-..... ..+....+ ...+-+..+|.||+.-|.. ..+...+ +.+.
T Consensus 19 ~mA~~L~~-~G~~V~v~dr~~~~~~~l~-~~G~~~~~----s~~e~~~~~dvvi~~l~~~-----~~~~~v~~~~~~--- 84 (297)
T 4gbj_A 19 PIAEILLE-AGYELVVWNRTASKAEPLT-KLGATVVE----NAIDAITPGGIVFSVLADD-----AAVEELFSMELV--- 84 (297)
T ss_dssp HHHHHHHH-TTCEEEEC-------CTTT-TTTCEECS----SGGGGCCTTCEEEECCSSH-----HHHHHHSCHHHH---
T ss_pred HHHHHHHH-CCCeEEEEeCCHHHHHHHH-HcCCeEeC----CHHHHHhcCCceeeeccch-----hhHHHHHHHHHH---
Confidence 44455555 4899999887542111010 00000001 1135567899999988863 2222221 1111
Q ss_pred ccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCcc
Q 029532 90 RTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYT 136 (192)
Q Consensus 90 ~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~ 136 (192)
...-+++.+ +-.+ .. ...+.+.+...+...|+.+++.+..
T Consensus 85 -~~~~~~~ii-id~s--T~---~p~~~~~~~~~~~~~g~~~ldapVs 124 (297)
T 4gbj_A 85 -EKLGKDGVH-VSMS--TI---SPETSRQLAQVHEWYGAHYVGAPIF 124 (297)
T ss_dssp -HHHCTTCEE-EECS--CC---CHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred -hhcCCCeEE-EECC--CC---ChHHHHHHHHHHHhcCCceecCCcC
Confidence 011233332 2222 21 2344567888889999999987654
No 152
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=21.13 E-value=1.5e+02 Score=22.90 Aligned_cols=29 Identities=17% Similarity=0.130 Sum_probs=23.2
Q ss_pred hhCCEEEEeccccCCCchHHHHHHHHhhc
Q 029532 58 AEADGFVFGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 58 ~~aD~ii~gsP~y~g~~~~~~k~fld~~~ 86 (192)
..+|++++.+|-|+.--...+..++..+.
T Consensus 109 ~Gadavlv~~P~y~~~s~~~l~~~f~~va 137 (304)
T 3l21_A 109 EGAHGLLVVTPYYSKPPQRGLQAHFTAVA 137 (304)
T ss_dssp HTCSEEEEECCCSSCCCHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 47999999999998765667777777763
No 153
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=21.03 E-value=80 Score=26.15 Aligned_cols=72 Identities=10% Similarity=0.170 Sum_probs=35.5
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCC-CCC-CCCChhHhh----hCCEEEEeccccCCCchHHHHHH
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK-SDV-PIITPNELA----EADGFVFGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~----~aD~ii~gsP~y~g~~~~~~k~f 81 (192)
|...++..+.+ .|.+|.+++.............+..+. ... .....+++. .+|.||+..|.. ..++..
T Consensus 12 mG~~lA~~La~-~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~-----~~v~~v 85 (478)
T 1pgj_A 12 MGANLALNIAE-KGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG-----AATDST 85 (478)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS-----HHHHHH
T ss_pred HHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCCh-----HHHHHH
Confidence 45566666666 488888887542111111111010000 000 001234433 399999999986 235555
Q ss_pred HHhh
Q 029532 82 LDAT 85 (192)
Q Consensus 82 ld~~ 85 (192)
++.+
T Consensus 86 l~~l 89 (478)
T 1pgj_A 86 IEQL 89 (478)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5555
No 154
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=20.98 E-value=27 Score=25.83 Aligned_cols=68 Identities=6% Similarity=0.088 Sum_probs=35.1
Q ss_pred HHHHHHHhccccCCc----eeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHH
Q 029532 8 LAEEIKKGASSVEGV----EAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 8 la~~i~~~l~~~~g~----ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld 83 (192)
|...++..+.+ .|. +|.+++..+..........+..... ...+.+.++|.||+.+|.+ .++..++
T Consensus 13 mG~~~a~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~----~~~e~~~~aDvVilav~~~------~~~~v~~ 81 (247)
T 3gt0_A 13 MGMAMIGGMIN-KNIVSSNQIICSDLNTANLKNASEKYGLTTTT----DNNEVAKNADILILSIKPD------LYASIIN 81 (247)
T ss_dssp HHHHHHHHHHH-TTSSCGGGEEEECSCHHHHHHHHHHHCCEECS----CHHHHHHHCSEEEECSCTT------THHHHC-
T ss_pred HHHHHHHHHHh-CCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeC----ChHHHHHhCCEEEEEeCHH------HHHHHHH
Confidence 56677777776 476 7888775432111111111110001 1135678899999999754 3555555
Q ss_pred hhc
Q 029532 84 ATG 86 (192)
Q Consensus 84 ~~~ 86 (192)
.+.
T Consensus 82 ~l~ 84 (247)
T 3gt0_A 82 EIK 84 (247)
T ss_dssp --C
T ss_pred HHH
Confidence 553
No 155
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=20.96 E-value=1.5e+02 Score=20.44 Aligned_cols=48 Identities=8% Similarity=-0.006 Sum_probs=31.0
Q ss_pred ChhHhhhCCEEEEeccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEe
Q 029532 53 TPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 53 ~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s 104 (192)
...-+..+|++|+....-...-...++.|++.+.. ....+.++.++++
T Consensus 74 ~~~~~~~~d~vilv~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~n 121 (206)
T 2bcg_Y 74 TSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR----YATSTVLKLLVGN 121 (206)
T ss_dssp CGGGGTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEE
T ss_pred HHHhccCCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEE
Confidence 35678899999998776554444566667766641 1234567766665
No 156
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=20.87 E-value=2.9e+02 Score=21.16 Aligned_cols=103 Identities=12% Similarity=-0.010 Sum_probs=53.6
Q ss_pred HHHHHHHhccccCC-ceeEEEEcCCCCC---HHHhc---ccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHH
Q 029532 8 LAEEIKKGASSVEG-VEAKLWQVPETLP---EEVLG---KMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKA 80 (192)
Q Consensus 8 la~~i~~~l~~~~g-~ev~~~~l~~~~~---~~~~~---~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~ 80 (192)
|...++..+.+ .| .+|.+++.....+ ..... ..+. ... ...+.+.++|.||+..|.... .+
T Consensus 35 mG~~lA~~L~~-~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~---s~~e~~~~aDvVi~avp~~~~-----~~- 102 (317)
T 4ezb_A 35 AAQSIAGGLGG-RNAARLAAYDLRFNDPAASGALRARAAELGV--EPL---DDVAGIACADVVLSLVVGAAT-----KA- 102 (317)
T ss_dssp HHHHHHHHHHT-TTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEE---SSGGGGGGCSEEEECCCGGGH-----HH-
T ss_pred HHHHHHHHHHH-cCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCC---CHHHHHhcCCEEEEecCCHHH-----HH-
Confidence 55667777777 58 8999988764111 01111 1111 010 123567889999999998531 11
Q ss_pred HHHhhccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecC
Q 029532 81 FLDATGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPI 133 (192)
Q Consensus 81 fld~~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~ 133 (192)
.++.+. ..+ +++.+ +.+++. ...+...+...+...|..+++.
T Consensus 103 ~~~~i~-----~~l~~~~iv--v~~st~----~p~~~~~~~~~l~~~g~~~~d~ 145 (317)
T 4ezb_A 103 VAASAA-----PHLSDEAVF--IDLNSV----GPDTKALAAGAIATGKGSFVEG 145 (317)
T ss_dssp HHHHHG-----GGCCTTCEE--EECCSC----CHHHHHHHHHHHHTSSCEEEEE
T ss_pred HHHHHH-----hhcCCCCEE--EECCCC----CHHHHHHHHHHHHHcCCeEEec
Confidence 224442 123 23322 222211 2334456667777778777653
No 157
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=20.80 E-value=42 Score=25.16 Aligned_cols=42 Identities=7% Similarity=-0.126 Sum_probs=24.9
Q ss_pred hhhCCEEEEec--c-ccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEec
Q 029532 57 LAEADGFVFGF--P-TRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST 105 (192)
Q Consensus 57 l~~aD~ii~gs--P-~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~ 105 (192)
..++|+||+-- + .+...-.+.+..|+.+.. -.||+++.++++
T Consensus 96 ~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~-------~~gk~iaaIC~G 140 (244)
T 3kkl_A 96 ASDYKVFFASAGHGALFDYPKAKNLQDIASKIY-------ANGGVIAAICHG 140 (244)
T ss_dssp GGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHH-------HTTCEEEEETTG
T ss_pred HhhCCEEEEcCCCchhhhcccCHHHHHHHHHHH-------HcCCEEEEECHH
Confidence 46799999842 2 233334567777777763 145666555543
No 158
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=20.79 E-value=1.1e+02 Score=23.53 Aligned_cols=59 Identities=10% Similarity=0.080 Sum_probs=32.0
Q ss_pred HHHHHHHhccccCCc--eeEEEEcCCCCCHHHhcccCCCCCCCCCCCChh-HhhhCCEEEEecccc
Q 029532 8 LAEEIKKGASSVEGV--EAKLWQVPETLPEEVLGKMSAPPKSDVPIITPN-ELAEADGFVFGFPTR 70 (192)
Q Consensus 8 la~~i~~~l~~~~g~--ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aD~ii~gsP~y 70 (192)
|...++..+.+ .|. +|..++..+. ..+.....+.. +.......+ .+.++|.||+++|..
T Consensus 44 mG~slA~~l~~-~G~~~~V~~~dr~~~-~~~~a~~~G~~--~~~~~~~~~~~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 44 MGGSFAKSLRR-SGFKGKIYGYDINPE-SISKAVDLGII--DEGTTSIAKVEDFSPDFVMLSSPVR 105 (314)
T ss_dssp HHHHHHHHHHH-TTCCSEEEEECSCHH-HHHHHHHTTSC--SEEESCTTGGGGGCCSEEEECSCGG
T ss_pred HHHHHHHHHHh-CCCCCEEEEEECCHH-HHHHHHHCCCc--chhcCCHHHHhhccCCEEEEeCCHH
Confidence 55677777777 487 7777765431 11111111110 000000124 588999999999986
No 159
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=20.76 E-value=1.4e+02 Score=23.32 Aligned_cols=60 Identities=12% Similarity=0.046 Sum_probs=34.2
Q ss_pred ccccCCC---chHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHc-CCEEe
Q 029532 67 FPTRFGM---MAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHH-GMIFV 131 (192)
Q Consensus 67 sP~y~g~---~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~-g~~vv 131 (192)
.|++|+. ...|...++|-+.-.-..+.++|+++++++-.-+ + +....+...+... |+.+.
T Consensus 119 vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~l~glkva~vGD~~~--~---rva~Sl~~~~~~~~G~~v~ 182 (306)
T 4ekn_B 119 VPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKY--G---RTVHSLVYALSLFENVEMY 182 (306)
T ss_dssp SCEEESCSSSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTT--C---HHHHHHHHHHHTSSSCEEE
T ss_pred CCEEeCCCCCCcCcHHHHHHHHHHHHHhCCcCCCEEEEEcCCCC--C---cHHHHHHHHHHhcCCCEEE
Confidence 4788752 3455566666543110124689999988764211 1 2344566666777 87764
No 160
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=20.66 E-value=65 Score=23.28 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=26.7
Q ss_pred hhCCEEEEe-ccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEec
Q 029532 58 AEADGFVFG-FPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYST 105 (192)
Q Consensus 58 ~~aD~ii~g-sP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~ 105 (192)
.++|+||+- .+.... -.+.+..||.+.. -++|+++.++++
T Consensus 62 ~~~D~livpGG~~~~~-~~~~l~~~l~~~~-------~~gk~iaaiC~G 102 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSN-DNKKLLHFVKTAF-------QKNIPIAAICGA 102 (206)
T ss_dssp SCCSEEEECCBSCCCC-CCHHHHHHHHHHH-------HTTCCEEEETHH
T ss_pred cCCCEEEEcCCCChhh-cCHHHHHHHHHHH-------HcCCEEEEECHH
Confidence 478999983 332222 5677888887763 267888877763
No 161
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=20.65 E-value=99 Score=25.38 Aligned_cols=15 Identities=7% Similarity=-0.015 Sum_probs=13.2
Q ss_pred hhHhhhCCEEEEecc
Q 029532 54 PNELAEADGFVFGFP 68 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP 68 (192)
.+.+.+||+||+.|+
T Consensus 369 ~~~~~~ad~vvi~t~ 383 (431)
T 3ojo_A 369 SHAVKDASLVLILSD 383 (431)
T ss_dssp HHHHTTCSEEEECSC
T ss_pred HHHHhCCCEEEEecC
Confidence 577899999999986
No 162
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=20.53 E-value=1.1e+02 Score=23.98 Aligned_cols=61 Identities=13% Similarity=0.055 Sum_probs=34.8
Q ss_pred eccccCC---CchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEe
Q 029532 66 GFPTRFG---MMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFV 131 (192)
Q Consensus 66 gsP~y~g---~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv 131 (192)
..|++|+ ....|...++|-+.-.-..+.++|+++++++-. .++ +....+...+...|+.+.
T Consensus 122 ~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~--~~~---rva~Sl~~~~~~~G~~v~ 185 (308)
T 1ml4_A 122 EVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDL--KYG---RTVHSLAEALTFYDVELY 185 (308)
T ss_dssp SSCEEEEEETTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCT--TTC---HHHHHHHHHGGGSCEEEE
T ss_pred CCCEEeCccCCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCC--CcC---chHHHHHHHHHHCCCEEE
Confidence 4688873 245566667776531111246888888776542 111 234456666667787765
No 163
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=20.49 E-value=42 Score=24.14 Aligned_cols=40 Identities=18% Similarity=0.138 Sum_probs=23.6
Q ss_pred hhhCCEEEEe-ccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEe
Q 029532 57 LAEADGFVFG-FPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYS 104 (192)
Q Consensus 57 l~~aD~ii~g-sP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s 104 (192)
..++|.||+- .+...... +.+..||.+.. -+||+++.+++
T Consensus 69 ~~~~D~livpGG~~~~~~~-~~l~~~l~~~~-------~~g~~iaaIC~ 109 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKY-PELDRLLNDCA-------AHGMALGGLWN 109 (202)
T ss_dssp GTTCSEEEEECCTTCCSCC-TTHHHHHHHHH-------HHTCEEEEETT
T ss_pred CCCCCEEEEeCCCchhhcc-HHHHHHHHHHH-------hhCCEEEEECH
Confidence 6789999983 32222222 56677776653 24666666655
No 164
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=20.40 E-value=2.1e+02 Score=21.84 Aligned_cols=107 Identities=10% Similarity=0.154 Sum_probs=56.8
Q ss_pred HHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCCCCCChhHhhhCCEEEEeccccCCCchHHHHHHHHhhcccccc
Q 029532 12 IKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRT 91 (192)
Q Consensus 12 i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~~ 91 (192)
++.-|.+ .|.+|.++|....-..... ..+....+ ...+-+..+|.||..-|.. ..++..+.....+. .
T Consensus 18 mA~~L~~-~G~~v~v~dr~~~~~~~l~-~~Ga~~a~----s~~e~~~~~dvv~~~l~~~-----~~v~~V~~~~~g~~-~ 85 (300)
T 3obb_A 18 MATNLLK-AGYLLNVFDLVQSAVDGLV-AAGASAAR----SARDAVQGADVVISMLPAS-----QHVEGLYLDDDGLL-A 85 (300)
T ss_dssp HHHHHHH-TTCEEEEECSSHHHHHHHH-HTTCEECS----SHHHHHTTCSEEEECCSCH-----HHHHHHHHSSSSST-T
T ss_pred HHHHHHh-CCCeEEEEcCCHHHHHHHH-HcCCEEcC----CHHHHHhcCCceeecCCch-----HHHHHHHhchhhhh-h
Confidence 3444445 4899999987542111111 11110000 1135577899999988863 56666665432211 1
Q ss_pred CCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCcc
Q 029532 92 QQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYT 136 (192)
Q Consensus 92 ~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~~ 136 (192)
...+|+.+ .-++.. ...+...+...+...|..+++.++.
T Consensus 86 ~~~~g~ii---Id~sT~---~p~~~~~~a~~~~~~G~~~lDaPVs 124 (300)
T 3obb_A 86 HIAPGTLV---LECSTI---APTSARKIHAAARERGLAMLDAPVS 124 (300)
T ss_dssp SCCC-CEE---EECSCC---CHHHHHHHHHHHHTTTCEEEECCEE
T ss_pred cCCCCCEE---EECCCC---CHHHHHHHHHHHHHcCCEEEecCCC
Confidence 12234433 222221 2344567888889999999986653
No 165
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.32 E-value=2e+02 Score=23.86 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=23.9
Q ss_pred CCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 92 QQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 92 ~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
..|.||++++++-. .... .+..+|...||.++..+.
T Consensus 328 ~~l~GKrv~i~~~~-----~~~~---~l~~~L~ElGmevv~~gt 363 (483)
T 3pdi_A 328 ARLEGKRVLLYTGG-----VKSW---SVVSALQDLGMKVVATGT 363 (483)
T ss_dssp HHHTTCEEEEECSS-----SCHH---HHHHHHHHHTCEEEEECB
T ss_pred HHhcCCEEEEECCC-----chHH---HHHHHHHHCCCEEEEEec
Confidence 35889999876431 1222 355667899999987544
No 166
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=20.24 E-value=33 Score=26.52 Aligned_cols=13 Identities=23% Similarity=0.434 Sum_probs=11.3
Q ss_pred hhhCCEEEEeccc
Q 029532 57 LAEADGFVFGFPT 69 (192)
Q Consensus 57 l~~aD~ii~gsP~ 69 (192)
-..+|++|++||+
T Consensus 170 ~~~~DGlIVsTPT 182 (278)
T 1z0s_A 170 RIRCDGFIVATQI 182 (278)
T ss_dssp EEEESEEEEEESG
T ss_pred EEecCeEEEecCC
Confidence 3579999999997
No 167
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=20.06 E-value=1.1e+02 Score=20.42 Aligned_cols=75 Identities=9% Similarity=0.070 Sum_probs=40.1
Q ss_pred hhHhhhCCEEEEeccccCCCchHHHHHHHHhhccccccCCCCCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEec
Q 029532 54 PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ii~gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.|++.+.. ..-.++++.++++=-.-..........+...+...++.++.
T Consensus 82 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 156 (179)
T 1z0f_A 82 RSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN----LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLE 156 (179)
T ss_dssp HHHHHTCSEEEEEEETTCHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEEE
T ss_pred HHHhccCCEEEEEEeCcCHHHHHHHHHHHHHHHH----hcCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEEE
Confidence 4568899999998766554444455666666531 12246777777663111000001123455555666765543
No 168
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=20.05 E-value=3.8e+02 Score=22.24 Aligned_cols=109 Identities=13% Similarity=0.208 Sum_probs=57.1
Q ss_pred HHHHHHHhccccCCceeEEEEcCCCCCHHHhcccCCCCCCCC-CCCChhHhh----hCCEEEEeccccCCCchHHHHHHH
Q 029532 8 LAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDV-PIITPNELA----EADGFVFGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 8 la~~i~~~l~~~~g~ev~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~----~aD~ii~gsP~y~g~~~~~~k~fl 82 (192)
|...++..+.+ .|.+|.+++............ +... ... .....+++. ++|.||+..|.- ..++..+
T Consensus 15 MG~~lA~~L~~-~G~~V~v~dr~~~~~~~l~~~-g~~g-~~i~~~~s~~e~v~~l~~aDvVil~Vp~~-----~~v~~vl 86 (484)
T 4gwg_A 15 MGQNLILNMND-HGFVVCAFNRTVSKVDDFLAN-EAKG-TKVVGAQSLKEMVSKLKKPRRIILLVKAG-----QAVDDFI 86 (484)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSSTHHHHHHHHT-TTTT-SSCEECSSHHHHHHTBCSSCEEEECSCSS-----HHHHHHH
T ss_pred HHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHhc-ccCC-CceeccCCHHHHHhhccCCCEEEEecCCh-----HHHHHHH
Confidence 55667777777 588999988654211111111 1000 001 001234443 499999999974 3566777
Q ss_pred HhhccccccCCC-CCCcEEEEEecCCCCCChHHHHHHHHHHHHHcCCEEecCCc
Q 029532 83 DATGGLWRTQQL-AGKPAGMFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 83 d~~~~~~~~~~l-~gK~~~~~~s~g~~~g~~~~~l~~~~~~l~~~g~~vv~~~~ 135 (192)
+.+.+ .+ +|+. +...+.. .. .....+...+...|+.+++.+.
T Consensus 87 ~~l~~-----~L~~g~i---IId~st~--~~-~~t~~~~~~l~~~Gi~fvd~pV 129 (484)
T 4gwg_A 87 EKLVP-----LLDTGDI---IIDGGNS--EY-RDTTRRCRDLKAKGILFVGSGV 129 (484)
T ss_dssp HHHGG-----GCCTTCE---EEECSCC--CH-HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHH-----hcCCCCE---EEEcCCC--Cc-hHHHHHHHHHHhhccccccCCc
Confidence 77642 23 3332 3333222 22 2223455667778988887543
Done!