Query 029536
Match_columns 192
No_of_seqs 163 out of 2579
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 23:57:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029536.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029536hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 2.5E-33 8.4E-38 221.5 19.8 180 1-192 42-221 (242)
2 3dr5_A Putative O-methyltransf 100.0 3.1E-33 1.1E-37 218.2 19.7 174 2-191 36-213 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 2.8E-32 9.7E-37 214.6 21.6 185 1-191 52-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 3E-32 1E-36 215.8 21.8 186 1-191 61-246 (247)
5 3tr6_A O-methyltransferase; ce 100.0 2.9E-31 9.9E-36 206.2 21.6 180 1-192 46-225 (225)
6 3cbg_A O-methyltransferase; cy 100.0 4.8E-31 1.6E-35 206.8 21.3 177 1-191 54-232 (232)
7 3ntv_A MW1564 protein; rossman 100.0 7E-31 2.4E-35 205.8 21.4 177 3-192 55-232 (232)
8 3duw_A OMT, O-methyltransferas 100.0 4.5E-30 1.5E-34 199.3 23.5 178 1-191 40-222 (223)
9 3tfw_A Putative O-methyltransf 100.0 4.3E-30 1.5E-34 203.4 22.9 177 1-192 45-226 (248)
10 2avd_A Catechol-O-methyltransf 100.0 5.5E-30 1.9E-34 199.4 23.0 179 1-191 51-229 (229)
11 3c3p_A Methyltransferase; NP_9 100.0 6.8E-29 2.3E-33 191.3 17.1 172 2-192 39-210 (210)
12 2hnk_A SAM-dependent O-methylt 100.0 4.1E-28 1.4E-32 190.5 21.4 185 1-191 42-231 (239)
13 3u81_A Catechol O-methyltransf 100.0 2E-27 7E-32 184.5 18.9 165 1-192 40-214 (221)
14 2gpy_A O-methyltransferase; st 99.9 1.2E-25 4.2E-30 175.6 17.7 178 2-191 37-214 (233)
15 3cvo_A Methyltransferase-like 99.8 1.4E-19 4.9E-24 138.5 14.7 129 1-139 14-158 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 1E-19 3.5E-24 146.0 11.9 161 3-192 86-282 (282)
17 2o07_A Spermidine synthase; st 99.8 4.5E-18 1.5E-22 138.2 11.6 149 17-191 93-256 (304)
18 2b2c_A Spermidine synthase; be 99.8 6.7E-18 2.3E-22 137.8 12.1 150 17-191 106-269 (314)
19 2bm8_A Cephalosporin hydroxyla 99.7 6.5E-18 2.2E-22 132.5 10.6 116 5-136 67-188 (236)
20 3fpf_A Mtnas, putative unchara 99.7 2.3E-16 7.9E-21 127.1 16.8 108 14-137 117-224 (298)
21 3jwg_A HEN1, methyltransferase 99.7 1.2E-16 3.9E-21 123.1 13.6 168 4-184 14-194 (219)
22 3p9n_A Possible methyltransfer 99.7 2.7E-16 9.4E-21 118.6 15.3 106 18-136 43-154 (189)
23 3jwh_A HEN1; methyltransferase 99.7 6.7E-17 2.3E-21 124.4 12.1 168 4-184 14-194 (217)
24 3e05_A Precorrin-6Y C5,15-meth 99.7 1.6E-16 5.5E-21 121.2 13.5 119 4-136 25-143 (204)
25 1uir_A Polyamine aminopropyltr 99.7 1.4E-16 4.9E-21 129.9 13.3 152 16-191 74-242 (314)
26 1xj5_A Spermidine synthase 1; 99.7 1.3E-16 4.3E-21 131.2 12.9 112 17-139 118-240 (334)
27 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.4E-16 4.9E-21 118.3 11.4 112 11-136 17-128 (178)
28 3njr_A Precorrin-6Y methylase; 99.7 1E-15 3.5E-20 117.3 16.4 116 4-136 40-155 (204)
29 1mjf_A Spermidine synthase; sp 99.7 3E-16 1E-20 126.0 14.0 148 16-191 72-239 (281)
30 4gek_A TRNA (CMO5U34)-methyltr 99.7 3.6E-16 1.2E-20 124.4 13.0 114 10-137 59-180 (261)
31 3orh_A Guanidinoacetate N-meth 99.7 1E-16 3.5E-21 125.6 9.5 117 10-140 49-175 (236)
32 2esr_A Methyltransferase; stru 99.7 2.8E-16 9.5E-21 117.1 11.3 107 17-136 29-139 (177)
33 1iy9_A Spermidine synthase; ro 99.7 4E-16 1.4E-20 125.0 12.8 106 17-134 73-188 (275)
34 2fhp_A Methylase, putative; al 99.7 8.9E-16 3E-20 114.9 12.3 109 18-136 43-155 (187)
35 1xdz_A Methyltransferase GIDB; 99.7 2E-15 7E-20 118.1 14.2 105 18-134 69-173 (240)
36 3mti_A RRNA methylase; SAM-dep 99.7 4E-15 1.4E-19 111.5 15.2 102 19-135 22-135 (185)
37 2ift_A Putative methylase HI07 99.7 8.5E-16 2.9E-20 117.4 11.4 116 10-137 44-165 (201)
38 3adn_A Spermidine synthase; am 99.7 1E-15 3.4E-20 123.8 12.1 107 16-134 80-197 (294)
39 1nkv_A Hypothetical protein YJ 99.6 1.2E-15 4.2E-20 119.8 12.1 118 6-138 23-143 (256)
40 1inl_A Spermidine synthase; be 99.6 1.4E-15 4.9E-20 123.0 12.7 106 17-134 88-204 (296)
41 3dlc_A Putative S-adenosyl-L-m 99.6 1.8E-15 6.2E-20 115.6 12.6 117 8-138 30-151 (219)
42 1ws6_A Methyltransferase; stru 99.6 5.4E-15 1.8E-19 109.0 14.4 105 19-136 41-148 (171)
43 1l3i_A Precorrin-6Y methyltran 99.6 4.6E-15 1.6E-19 110.9 13.8 117 5-136 19-135 (192)
44 2fpo_A Methylase YHHF; structu 99.6 2.6E-15 8.7E-20 114.8 12.3 105 18-136 53-161 (202)
45 3lpm_A Putative methyltransfer 99.6 9.9E-16 3.4E-20 121.3 10.2 114 8-133 37-174 (259)
46 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4.5E-15 1.5E-19 115.0 13.6 105 19-134 34-149 (218)
47 3f4k_A Putative methyltransfer 99.6 1.8E-15 6.1E-20 118.9 11.3 108 17-138 44-153 (257)
48 3hem_A Cyclopropane-fatty-acyl 99.6 5.4E-15 1.8E-19 119.3 14.3 118 5-139 55-187 (302)
49 3eey_A Putative rRNA methylase 99.6 1.5E-15 5.3E-20 114.9 10.4 107 18-135 21-139 (197)
50 3gjy_A Spermidine synthase; AP 99.6 2.3E-15 7.8E-20 122.6 11.9 107 17-135 85-200 (317)
51 3mb5_A SAM-dependent methyltra 99.6 1.6E-15 5.5E-20 119.3 10.4 116 4-134 78-193 (255)
52 3ajd_A Putative methyltransfer 99.6 9.9E-15 3.4E-19 116.7 15.1 119 9-136 73-212 (274)
53 3kkz_A Uncharacterized protein 99.6 1.7E-15 5.8E-20 120.0 10.5 108 17-138 44-153 (267)
54 3grz_A L11 mtase, ribosomal pr 99.6 1E-14 3.6E-19 111.1 14.3 114 7-137 47-161 (205)
55 2fca_A TRNA (guanine-N(7)-)-me 99.6 8.4E-15 2.9E-19 112.9 13.4 104 19-134 38-152 (213)
56 1yzh_A TRNA (guanine-N(7)-)-me 99.6 4.8E-15 1.7E-19 113.9 12.0 104 19-134 41-155 (214)
57 2igt_A SAM dependent methyltra 99.6 4.4E-14 1.5E-18 116.0 18.3 108 18-136 152-273 (332)
58 2pt6_A Spermidine synthase; tr 99.6 4.8E-15 1.6E-19 121.2 12.0 107 16-134 113-229 (321)
59 2nxc_A L11 mtase, ribosomal pr 99.6 5.5E-14 1.9E-18 111.2 17.3 114 6-137 106-220 (254)
60 2ozv_A Hypothetical protein AT 99.6 2.1E-15 7.2E-20 119.7 9.1 119 9-133 26-168 (260)
61 2b3t_A Protein methyltransfera 99.6 8.2E-15 2.8E-19 117.0 12.4 116 4-134 92-237 (276)
62 4dzr_A Protein-(glutamine-N5) 99.6 1.9E-15 6.6E-20 115.1 8.4 119 4-133 11-163 (215)
63 2i7c_A Spermidine synthase; tr 99.6 7.6E-15 2.6E-19 118.0 12.1 106 17-134 76-191 (283)
64 3lbf_A Protein-L-isoaspartate 99.6 6.5E-15 2.2E-19 112.5 10.6 112 4-134 62-173 (210)
65 3m6w_A RRNA methylase; rRNA me 99.6 3.3E-14 1.1E-18 121.3 16.0 118 7-137 89-231 (464)
66 3bus_A REBM, methyltransferase 99.6 2.4E-14 8.1E-19 113.5 14.0 119 6-138 45-169 (273)
67 1nv8_A HEMK protein; class I a 99.6 2.6E-14 8.9E-19 114.9 14.2 115 4-134 105-248 (284)
68 3g89_A Ribosomal RNA small sub 99.6 7.9E-15 2.7E-19 115.8 10.6 103 19-133 80-182 (249)
69 3mgg_A Methyltransferase; NYSG 99.6 3E-14 1E-18 113.2 14.0 109 18-140 36-147 (276)
70 2b78_A Hypothetical protein SM 99.6 2.2E-14 7.4E-19 120.0 13.7 109 18-136 211-332 (385)
71 3gu3_A Methyltransferase; alph 99.6 4.6E-15 1.6E-19 118.8 9.3 109 14-137 17-128 (284)
72 3dh0_A SAM dependent methyltra 99.6 5E-14 1.7E-18 108.0 14.7 111 16-139 34-147 (219)
73 3c0k_A UPF0064 protein YCCW; P 99.6 2.4E-14 8.2E-19 120.1 13.9 112 14-135 215-339 (396)
74 4htf_A S-adenosylmethionine-de 99.6 1.6E-14 5.6E-19 115.4 12.3 104 19-136 68-174 (285)
75 2yxd_A Probable cobalt-precorr 99.6 5.4E-14 1.9E-18 104.4 14.1 112 5-136 21-132 (183)
76 1kpg_A CFA synthase;, cyclopro 99.6 3.2E-14 1.1E-18 113.7 13.8 117 5-138 47-171 (287)
77 1zx0_A Guanidinoacetate N-meth 99.6 5.4E-15 1.8E-19 115.3 8.9 115 9-137 48-172 (236)
78 1dus_A MJ0882; hypothetical pr 99.6 5.2E-14 1.8E-18 105.3 13.9 108 13-136 46-158 (194)
79 3a27_A TYW2, uncharacterized p 99.6 7.4E-15 2.5E-19 117.3 9.7 113 9-137 109-221 (272)
80 1jsx_A Glucose-inhibited divis 99.6 1.5E-14 5.1E-19 110.1 10.9 100 19-134 65-164 (207)
81 1xxl_A YCGJ protein; structura 99.6 3.5E-14 1.2E-18 110.8 13.2 118 4-137 6-126 (239)
82 3sso_A Methyltransferase; macr 99.6 5.8E-14 2E-18 117.1 15.2 149 19-191 216-392 (419)
83 3m4x_A NOL1/NOP2/SUN family pr 99.6 2.6E-14 8.9E-19 121.7 13.4 119 7-137 93-236 (456)
84 3g5t_A Trans-aconitate 3-methy 99.6 3.8E-14 1.3E-18 114.2 13.4 118 10-133 25-147 (299)
85 3kr9_A SAM-dependent methyltra 99.6 1.1E-14 3.8E-19 113.2 9.8 113 11-136 6-120 (225)
86 1vl5_A Unknown conserved prote 99.6 3.4E-14 1.2E-18 112.0 12.7 106 16-137 34-142 (260)
87 1ixk_A Methyltransferase; open 99.6 2E-14 6.8E-19 117.2 11.6 118 6-136 105-247 (315)
88 3evz_A Methyltransferase; NYSG 99.6 1.3E-14 4.5E-19 112.3 10.0 103 17-134 53-178 (230)
89 2qfm_A Spermine synthase; sper 99.6 4.8E-14 1.6E-18 116.3 13.9 107 18-134 187-313 (364)
90 2o57_A Putative sarcosine dime 99.6 3.5E-14 1.2E-18 114.0 12.6 107 18-138 81-190 (297)
91 2as0_A Hypothetical protein PH 99.6 2.6E-14 9E-19 119.8 12.1 111 16-136 213-336 (396)
92 2fk8_A Methoxy mycolic acid sy 99.6 5.5E-14 1.9E-18 114.1 13.6 116 6-138 74-197 (318)
93 3ckk_A TRNA (guanine-N(7)-)-me 99.6 8.2E-14 2.8E-18 109.0 14.1 106 18-134 45-167 (235)
94 2frn_A Hypothetical protein PH 99.6 8.8E-15 3E-19 117.2 8.7 104 19-138 125-228 (278)
95 3g07_A 7SK snRNA methylphospha 99.6 1E-14 3.6E-19 117.4 9.0 114 18-139 45-224 (292)
96 1o54_A SAM-dependent O-methylt 99.6 2E-14 6.9E-19 114.7 10.4 115 6-135 99-213 (277)
97 2pbf_A Protein-L-isoaspartate 99.6 4.6E-14 1.6E-18 109.1 12.1 114 10-134 70-192 (227)
98 2b25_A Hypothetical protein; s 99.5 2.4E-14 8.3E-19 117.3 10.8 118 5-134 91-218 (336)
99 2xvm_A Tellurite resistance pr 99.5 8.4E-14 2.9E-18 104.9 13.0 107 13-136 26-137 (199)
100 2yxe_A Protein-L-isoaspartate 99.5 2.9E-14 9.8E-19 109.3 10.5 114 5-134 63-176 (215)
101 3gdh_A Trimethylguanosine synt 99.5 1.6E-15 5.6E-20 118.3 3.6 112 8-135 67-181 (241)
102 3fzg_A 16S rRNA methylase; met 99.5 1.6E-13 5.5E-18 103.6 14.2 156 7-191 36-197 (200)
103 1sqg_A SUN protein, FMU protei 99.5 2.5E-13 8.4E-18 115.1 16.9 120 5-137 232-376 (429)
104 3htx_A HEN1; HEN1, small RNA m 99.5 2.7E-13 9.2E-18 121.4 17.8 160 11-184 713-900 (950)
105 3vc1_A Geranyl diphosphate 2-C 99.5 3.3E-14 1.1E-18 115.3 10.9 107 18-138 116-224 (312)
106 1dl5_A Protein-L-isoaspartate 99.5 3.6E-14 1.2E-18 115.6 10.8 114 5-134 61-174 (317)
107 3dtn_A Putative methyltransfer 99.5 9E-15 3.1E-19 113.4 6.8 104 18-138 43-151 (234)
108 1u2z_A Histone-lysine N-methyl 99.5 1.1E-13 3.8E-18 117.0 13.9 112 16-139 239-363 (433)
109 2pwy_A TRNA (adenine-N(1)-)-me 99.5 4.4E-14 1.5E-18 110.9 10.8 113 8-135 85-198 (258)
110 1wxx_A TT1595, hypothetical pr 99.5 3.8E-14 1.3E-18 118.4 10.9 106 19-136 209-326 (382)
111 2yvl_A TRMI protein, hypotheti 99.5 6.4E-14 2.2E-18 109.4 11.6 113 5-134 77-189 (248)
112 3bwc_A Spermidine synthase; SA 99.5 3.2E-14 1.1E-18 115.4 10.1 106 18-134 94-209 (304)
113 2yxl_A PH0851 protein, 450AA l 99.5 1.1E-13 3.9E-18 117.8 13.6 121 6-137 246-391 (450)
114 2frx_A Hypothetical protein YE 99.5 9.3E-14 3.2E-18 119.2 12.9 120 6-137 102-248 (479)
115 3ocj_A Putative exported prote 99.5 1.7E-14 5.9E-19 116.6 7.8 108 18-138 117-230 (305)
116 3lec_A NADB-rossmann superfami 99.5 4.9E-14 1.7E-18 109.8 9.9 113 10-135 11-125 (230)
117 3m70_A Tellurite resistance pr 99.5 1.2E-13 4E-18 110.4 12.4 108 9-135 111-223 (286)
118 3v97_A Ribosomal RNA large sub 99.5 1E-13 3.6E-18 123.8 13.3 113 12-137 532-659 (703)
119 1i9g_A Hypothetical protein RV 99.5 1.1E-13 3.8E-18 110.2 12.1 116 5-134 85-202 (280)
120 2ex4_A Adrenal gland protein A 99.5 3E-14 1E-18 111.2 8.6 117 6-137 62-187 (241)
121 2p7i_A Hypothetical protein; p 99.5 3.6E-14 1.2E-18 110.3 8.8 107 9-136 32-142 (250)
122 1pjz_A Thiopurine S-methyltran 99.5 3.1E-14 1.1E-18 108.8 8.2 99 18-130 21-135 (203)
123 4dcm_A Ribosomal RNA large sub 99.5 3.5E-14 1.2E-18 118.4 9.0 103 18-134 221-333 (375)
124 1yb2_A Hypothetical protein TA 99.5 2.2E-14 7.5E-19 114.5 7.4 108 12-135 103-211 (275)
125 2vdv_E TRNA (guanine-N(7)-)-me 99.5 8.4E-14 2.9E-18 109.3 10.6 104 19-133 49-171 (246)
126 3lcc_A Putative methyl chlorid 99.5 4.5E-14 1.6E-18 109.7 8.9 104 19-138 66-174 (235)
127 2gb4_A Thiopurine S-methyltran 99.5 7.2E-14 2.5E-18 110.5 10.2 114 6-133 55-189 (252)
128 3ofk_A Nodulation protein S; N 99.5 2.5E-14 8.6E-19 109.6 7.2 108 10-136 42-155 (216)
129 4dmg_A Putative uncharacterize 99.5 1.1E-13 3.7E-18 116.1 11.6 105 16-136 210-327 (393)
130 1i1n_A Protein-L-isoaspartate 99.5 1.1E-13 3.7E-18 106.9 10.7 111 9-134 66-181 (226)
131 3bkx_A SAM-dependent methyltra 99.5 1.8E-13 6.1E-18 108.5 12.3 112 17-138 41-162 (275)
132 3gnl_A Uncharacterized protein 99.5 7.4E-14 2.5E-18 109.7 9.8 112 11-135 12-125 (244)
133 1g8a_A Fibrillarin-like PRE-rR 99.5 5.5E-14 1.9E-18 108.7 9.0 105 18-134 72-177 (227)
134 3tma_A Methyltransferase; thum 99.5 1.8E-13 6E-18 113.1 12.5 118 4-134 188-316 (354)
135 2kw5_A SLR1183 protein; struct 99.5 1.7E-13 6E-18 103.8 11.4 112 10-138 20-134 (202)
136 1wzn_A SAM-dependent methyltra 99.5 1.6E-13 5.5E-18 107.4 11.5 109 8-134 27-144 (252)
137 1jg1_A PIMT;, protein-L-isoasp 99.5 1.2E-13 4E-18 107.6 10.3 112 5-134 77-188 (235)
138 1nt2_A Fibrillarin-like PRE-rR 99.5 1.5E-13 5E-18 105.8 10.7 104 18-134 56-160 (210)
139 3k6r_A Putative transferase PH 99.5 6.5E-14 2.2E-18 112.2 9.0 104 18-137 124-227 (278)
140 3dmg_A Probable ribosomal RNA 99.5 1.6E-13 5.5E-18 114.6 11.5 115 3-134 212-339 (381)
141 1fbn_A MJ fibrillarin homologu 99.5 5.2E-14 1.8E-18 109.4 7.9 103 19-134 74-177 (230)
142 2cmg_A Spermidine synthase; tr 99.5 1.5E-14 5E-19 115.2 4.8 98 17-134 70-170 (262)
143 3thr_A Glycine N-methyltransfe 99.5 4.2E-13 1.4E-17 107.4 13.3 117 7-135 45-175 (293)
144 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.2E-13 4E-18 107.5 9.7 104 19-134 77-181 (233)
145 4fsd_A Arsenic methyltransfera 99.5 8.8E-14 3E-18 116.1 9.5 117 17-139 81-207 (383)
146 3h2b_A SAM-dependent methyltra 99.5 3.8E-13 1.3E-17 102.0 11.9 109 7-137 30-143 (203)
147 4df3_A Fibrillarin-like rRNA/T 99.5 1.2E-13 4E-18 108.0 9.2 107 17-135 75-182 (233)
148 2p8j_A S-adenosylmethionine-de 99.5 1.8E-13 6E-18 104.1 10.0 117 5-137 9-130 (209)
149 4hg2_A Methyltransferase type 99.5 8.4E-14 2.9E-18 110.5 8.4 105 9-135 28-135 (257)
150 3uwp_A Histone-lysine N-methyl 99.5 5.6E-13 1.9E-17 111.6 13.7 113 16-139 170-292 (438)
151 3q7e_A Protein arginine N-meth 99.5 3.7E-13 1.3E-17 111.1 12.5 104 16-134 63-172 (349)
152 3ujc_A Phosphoethanolamine N-m 99.5 1.2E-13 4E-18 108.7 8.9 113 9-138 42-162 (266)
153 3o4f_A Spermidine synthase; am 99.5 1.2E-13 4E-18 111.1 8.9 109 14-134 78-197 (294)
154 3dp7_A SAM-dependent methyltra 99.5 2.7E-13 9.1E-18 112.4 11.3 109 18-139 178-291 (363)
155 1vbf_A 231AA long hypothetical 99.5 2.4E-13 8.3E-18 105.2 10.2 109 5-134 56-164 (231)
156 1ve3_A Hypothetical protein PH 99.5 6.7E-13 2.3E-17 102.0 12.3 111 10-137 28-144 (227)
157 3r0q_C Probable protein argini 99.5 2.5E-13 8.5E-18 113.2 10.5 106 16-137 60-171 (376)
158 3ou2_A SAM-dependent methyltra 99.5 2.6E-13 8.9E-18 103.6 9.8 108 9-137 36-148 (218)
159 3g5l_A Putative S-adenosylmeth 99.5 2.5E-13 8.6E-18 106.5 10.0 98 19-134 44-144 (253)
160 3dli_A Methyltransferase; PSI- 99.5 1.3E-13 4.5E-18 107.4 8.3 98 18-137 40-142 (240)
161 2dul_A N(2),N(2)-dimethylguano 99.5 8.3E-13 2.8E-17 110.2 13.5 107 15-135 43-164 (378)
162 3hnr_A Probable methyltransfer 99.5 4.7E-13 1.6E-17 102.6 10.9 108 9-138 36-148 (220)
163 1o9g_A RRNA methyltransferase; 99.5 6.8E-14 2.3E-18 110.0 6.3 119 9-135 38-214 (250)
164 1r18_A Protein-L-isoaspartate( 99.5 7.2E-14 2.5E-18 108.2 6.2 112 8-134 72-193 (227)
165 1y8c_A S-adenosylmethionine-de 99.5 3.3E-13 1.1E-17 104.8 10.0 109 8-134 24-141 (246)
166 1g6q_1 HnRNP arginine N-methyl 99.5 1.3E-12 4.3E-17 107.0 13.8 106 14-134 33-144 (328)
167 2h00_A Methyltransferase 10 do 99.5 8.4E-14 2.9E-18 109.5 6.6 98 5-110 46-149 (254)
168 2fyt_A Protein arginine N-meth 99.4 7.2E-13 2.5E-17 109.0 12.2 103 16-133 61-169 (340)
169 3axs_A Probable N(2),N(2)-dime 99.4 6.8E-13 2.3E-17 111.0 12.2 104 19-134 52-157 (392)
170 3e8s_A Putative SAM dependent 99.4 5.7E-13 2E-17 102.1 10.8 105 15-137 48-154 (227)
171 2yqz_A Hypothetical protein TT 99.4 8.3E-13 2.8E-17 103.7 11.9 100 18-134 38-140 (263)
172 3id6_C Fibrillarin-like rRNA/T 99.4 4.6E-13 1.6E-17 104.6 10.3 106 17-134 74-180 (232)
173 1ri5_A MRNA capping enzyme; me 99.4 1.3E-12 4.5E-17 104.3 13.0 105 18-135 63-174 (298)
174 2yx1_A Hypothetical protein MJ 99.4 6.8E-13 2.3E-17 109.0 11.1 100 18-137 194-293 (336)
175 3mcz_A O-methyltransferase; ad 99.4 5.8E-13 2E-17 109.5 10.7 107 20-139 180-291 (352)
176 2y1w_A Histone-arginine methyl 99.4 7.2E-13 2.5E-17 109.3 11.1 102 17-134 48-154 (348)
177 3sm3_A SAM-dependent methyltra 99.4 9.9E-13 3.4E-17 101.4 11.0 104 18-136 29-142 (235)
178 2p35_A Trans-aconitate 2-methy 99.4 3E-13 1E-17 106.1 8.1 98 18-135 32-132 (259)
179 3pfg_A N-methyltransferase; N, 99.4 4.7E-13 1.6E-17 105.6 9.0 105 10-136 40-152 (263)
180 3i53_A O-methyltransferase; CO 99.4 6.7E-13 2.3E-17 108.4 9.8 106 19-140 169-279 (332)
181 3bkw_A MLL3908 protein, S-aden 99.4 9.1E-13 3.1E-17 102.3 10.1 108 10-135 34-144 (243)
182 3gwz_A MMCR; methyltransferase 99.4 1.2E-12 4.1E-17 108.7 11.3 106 18-139 201-311 (369)
183 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.4E-12 4.9E-17 101.9 11.2 102 18-136 92-198 (254)
184 3ege_A Putative methyltransfer 99.4 5.7E-13 1.9E-17 105.3 8.9 108 6-136 21-131 (261)
185 3d2l_A SAM-dependent methyltra 99.4 1E-12 3.5E-17 102.0 10.1 107 9-134 22-136 (243)
186 2vdw_A Vaccinia virus capping 99.4 1.1E-12 3.8E-17 106.3 10.6 109 20-136 49-170 (302)
187 3ccf_A Cyclopropane-fatty-acyl 99.4 7.2E-13 2.5E-17 105.5 9.1 100 15-136 53-155 (279)
188 3i9f_A Putative type 11 methyl 99.4 6.2E-13 2.1E-17 98.1 8.1 100 16-139 14-116 (170)
189 3g2m_A PCZA361.24; SAM-depende 99.4 2.1E-13 7.1E-18 109.8 5.7 104 19-138 82-193 (299)
190 4hc4_A Protein arginine N-meth 99.4 1.3E-12 4.4E-17 108.8 10.6 104 16-135 80-189 (376)
191 3ggd_A SAM-dependent methyltra 99.4 1.6E-12 5.5E-17 101.4 10.5 106 18-137 55-165 (245)
192 3p2e_A 16S rRNA methylase; met 99.4 4.5E-13 1.5E-17 104.1 7.1 103 18-133 23-137 (225)
193 3e23_A Uncharacterized protein 99.4 5.8E-13 2E-17 101.7 7.6 103 11-136 34-142 (211)
194 3m33_A Uncharacterized protein 99.4 1.8E-13 6.1E-18 106.0 4.7 101 9-132 36-139 (226)
195 2r3s_A Uncharacterized protein 99.4 2.8E-12 9.6E-17 104.5 11.9 106 18-138 164-274 (335)
196 2jjq_A Uncharacterized RNA met 99.4 4.2E-12 1.4E-16 107.4 13.3 112 3-134 273-386 (425)
197 2qm3_A Predicted methyltransfe 99.4 9.9E-13 3.4E-17 109.4 9.3 102 19-133 172-276 (373)
198 1x19_A CRTF-related protein; m 99.4 4.8E-12 1.6E-16 104.4 13.4 105 18-138 189-298 (359)
199 3bt7_A TRNA (uracil-5-)-methyl 99.4 4.1E-12 1.4E-16 105.5 12.9 128 2-136 193-327 (369)
200 3q87_B N6 adenine specific DNA 99.4 1.5E-12 5E-17 96.7 9.2 103 4-135 7-123 (170)
201 3mq2_A 16S rRNA methyltransfer 99.4 3E-12 1E-16 98.2 11.1 103 17-134 25-139 (218)
202 1wy7_A Hypothetical protein PH 99.4 1.4E-11 4.7E-16 93.7 14.6 109 4-133 31-147 (207)
203 3l8d_A Methyltransferase; stru 99.4 3E-12 1E-16 99.4 11.1 108 10-136 43-154 (242)
204 1qzz_A RDMB, aclacinomycin-10- 99.4 1.5E-12 5.3E-17 107.7 9.7 103 18-136 181-288 (374)
205 1tw3_A COMT, carminomycin 4-O- 99.4 2.5E-12 8.4E-17 106.1 10.7 104 18-137 182-290 (360)
206 3bzb_A Uncharacterized protein 99.4 7.2E-12 2.4E-16 100.3 12.9 120 6-133 63-203 (281)
207 3b3j_A Histone-arginine methyl 99.4 2.2E-12 7.5E-17 110.7 10.4 100 18-133 157-261 (480)
208 2pjd_A Ribosomal RNA small sub 99.4 1.2E-12 3.9E-17 107.8 8.3 100 18-134 195-302 (343)
209 2ip2_A Probable phenazine-spec 99.4 1.9E-12 6.4E-17 105.7 9.5 103 21-139 169-276 (334)
210 3tm4_A TRNA (guanine N2-)-meth 99.4 2.9E-12 1E-16 106.6 10.8 114 4-132 203-327 (373)
211 2gs9_A Hypothetical protein TT 99.4 2E-12 6.9E-17 98.5 9.0 96 19-137 36-134 (211)
212 3cgg_A SAM-dependent methyltra 99.4 6.9E-12 2.4E-16 93.7 11.6 104 9-135 38-147 (195)
213 2qe6_A Uncharacterized protein 99.4 1.1E-11 3.6E-16 99.1 13.2 114 19-138 77-199 (274)
214 3iv6_A Putative Zn-dependent a 99.4 2E-12 7E-17 102.6 8.5 100 16-134 42-147 (261)
215 1uwv_A 23S rRNA (uracil-5-)-me 99.4 7.7E-12 2.6E-16 106.0 12.6 115 7-134 271-388 (433)
216 1ej0_A FTSJ; methyltransferase 99.3 2.4E-12 8.3E-17 94.5 8.3 100 18-135 21-136 (180)
217 3bgv_A MRNA CAP guanine-N7 met 99.3 5.1E-12 1.7E-16 102.3 10.6 107 19-135 34-155 (313)
218 3bxo_A N,N-dimethyltransferase 99.3 4.3E-12 1.5E-16 98.2 9.8 98 18-137 39-143 (239)
219 2aot_A HMT, histamine N-methyl 99.3 6.1E-12 2.1E-16 101.0 10.6 108 19-134 52-171 (292)
220 2pxx_A Uncharacterized protein 99.3 3.5E-12 1.2E-16 96.9 8.5 110 10-136 32-160 (215)
221 1ne2_A Hypothetical protein TA 99.3 1.7E-11 5.9E-16 92.8 12.2 106 4-134 33-146 (200)
222 2avn_A Ubiquinone/menaquinone 99.3 8.5E-12 2.9E-16 98.4 10.5 95 19-135 54-152 (260)
223 3tos_A CALS11; methyltransfera 99.3 6.2E-11 2.1E-15 93.6 15.0 149 18-189 68-254 (257)
224 1p91_A Ribosomal RNA large sub 99.3 2E-11 6.7E-16 96.5 11.6 95 18-135 84-178 (269)
225 2i62_A Nicotinamide N-methyltr 99.3 1.7E-12 5.9E-17 102.0 5.1 110 18-137 55-200 (265)
226 2b9e_A NOL1/NOP2/SUN domain fa 99.3 8.9E-12 3E-16 101.3 8.5 118 8-136 91-235 (309)
227 2a14_A Indolethylamine N-methy 99.3 1E-12 3.4E-17 104.2 2.0 109 19-137 55-199 (263)
228 2f8l_A Hypothetical protein LM 99.2 2E-11 7E-16 100.3 9.2 115 5-134 112-255 (344)
229 3c6k_A Spermine synthase; sper 99.2 1.5E-11 5.3E-16 101.8 8.4 107 18-134 204-330 (381)
230 1vlm_A SAM-dependent methyltra 99.2 3.4E-11 1.2E-15 92.5 9.7 101 10-137 38-141 (219)
231 2qy6_A UPF0209 protein YFCK; s 99.2 2.3E-11 7.8E-16 96.4 8.7 108 19-133 60-211 (257)
232 2plw_A Ribosomal RNA methyltra 99.2 4.5E-11 1.6E-15 90.3 9.8 99 18-134 21-153 (201)
233 2g72_A Phenylethanolamine N-me 99.2 9.3E-12 3.2E-16 99.6 6.2 111 19-137 71-217 (289)
234 1zq9_A Probable dimethyladenos 99.2 5.9E-11 2E-15 95.3 10.9 90 5-111 14-103 (285)
235 3opn_A Putative hemolysin; str 99.2 4.6E-12 1.6E-16 98.9 3.8 99 19-133 37-135 (232)
236 3dou_A Ribosomal RNA large sub 99.2 4.9E-11 1.7E-15 90.3 9.3 99 18-134 24-138 (191)
237 3giw_A Protein of unknown func 99.2 9.1E-11 3.1E-15 93.5 11.1 114 18-138 77-203 (277)
238 3cc8_A Putative methyltransfer 99.2 1.3E-11 4.5E-16 94.6 5.9 97 18-135 31-130 (230)
239 4e2x_A TCAB9; kijanose, tetron 99.2 1.4E-11 4.6E-16 103.6 6.4 99 19-135 107-208 (416)
240 2r6z_A UPF0341 protein in RSP 99.2 1.6E-11 5.6E-16 97.3 5.9 92 8-110 72-170 (258)
241 3hp7_A Hemolysin, putative; st 99.2 7.6E-12 2.6E-16 100.7 3.9 98 19-134 85-184 (291)
242 2nyu_A Putative ribosomal RNA 99.2 1.5E-10 5E-15 87.1 10.0 100 18-135 21-145 (196)
243 3lst_A CALO1 methyltransferase 99.2 2.8E-11 9.6E-16 99.6 6.4 102 19-139 184-290 (348)
244 3lcv_B Sisomicin-gentamicin re 99.2 1.7E-10 5.9E-15 91.0 10.1 143 18-190 131-280 (281)
245 2h1r_A Dimethyladenosine trans 99.1 1.9E-10 6.4E-15 93.0 10.1 91 4-112 27-117 (299)
246 3reo_A (ISO)eugenol O-methyltr 99.1 2.3E-10 7.9E-15 94.9 10.9 97 19-139 203-304 (368)
247 3ll7_A Putative methyltransfer 99.1 7.7E-11 2.6E-15 98.9 7.8 77 20-110 94-172 (410)
248 2zfu_A Nucleomethylin, cerebra 99.1 8.6E-11 2.9E-15 89.7 7.4 95 9-137 57-153 (215)
249 2ih2_A Modification methylase 99.1 9.5E-11 3.2E-15 98.3 7.5 107 4-133 24-162 (421)
250 3frh_A 16S rRNA methylase; met 99.1 2.2E-09 7.6E-14 83.8 14.5 149 10-191 96-251 (253)
251 1af7_A Chemotaxis receptor met 99.1 9.8E-11 3.3E-15 93.6 6.7 105 19-134 105-251 (274)
252 4azs_A Methyltransferase WBDD; 99.1 2.2E-10 7.4E-15 100.2 9.2 101 17-131 64-169 (569)
253 4a6d_A Hydroxyindole O-methylt 99.1 4.8E-10 1.7E-14 92.5 10.6 104 18-138 178-286 (353)
254 3k0b_A Predicted N6-adenine-sp 99.1 3E-10 1E-14 95.1 9.2 110 10-132 192-347 (393)
255 3gru_A Dimethyladenosine trans 99.1 1.5E-09 5.3E-14 87.5 13.0 87 14-118 45-131 (295)
256 1m6y_A S-adenosyl-methyltransf 99.1 7.8E-10 2.7E-14 89.4 10.9 84 18-111 25-108 (301)
257 3p9c_A Caffeic acid O-methyltr 99.1 1.4E-10 4.9E-15 96.0 6.6 97 19-139 201-302 (364)
258 3ldu_A Putative methylase; str 99.1 2.2E-10 7.6E-15 95.7 7.6 104 16-132 192-341 (385)
259 4fzv_A Putative methyltransfer 99.1 1.4E-09 4.9E-14 89.8 12.3 117 8-136 137-285 (359)
260 2okc_A Type I restriction enzy 99.1 1.8E-10 6E-15 97.9 7.0 117 4-133 156-305 (445)
261 3ldg_A Putative uncharacterize 99.1 6.1E-10 2.1E-14 93.0 9.7 111 9-132 184-340 (384)
262 2oyr_A UPF0341 protein YHIQ; a 99.1 7.2E-11 2.5E-15 93.5 3.8 85 12-110 79-173 (258)
263 1fp1_D Isoliquiritigenin 2'-O- 99.0 5.9E-10 2E-14 92.4 8.5 96 19-138 209-309 (372)
264 1fp2_A Isoflavone O-methyltran 99.0 5.5E-10 1.9E-14 91.9 7.8 97 18-138 187-291 (352)
265 2ar0_A M.ecoki, type I restric 99.0 2.6E-09 8.7E-14 92.9 9.8 119 4-133 154-310 (541)
266 3tqs_A Ribosomal RNA small sub 98.9 2.8E-09 9.5E-14 84.3 8.9 90 5-110 15-105 (255)
267 1zg3_A Isoflavanone 4'-O-methy 98.9 3.2E-09 1.1E-13 87.5 8.7 97 18-138 192-296 (358)
268 3fut_A Dimethyladenosine trans 98.9 1.1E-08 3.7E-13 81.6 10.7 90 15-123 43-132 (271)
269 2wa2_A Non-structural protein 98.9 4E-10 1.4E-14 90.1 1.9 98 19-135 82-193 (276)
270 2oxt_A Nucleoside-2'-O-methylt 98.9 3.2E-10 1.1E-14 90.2 1.1 98 19-135 74-185 (265)
271 1qam_A ERMC' methyltransferase 98.9 2.2E-08 7.6E-13 78.4 11.6 60 18-83 29-88 (244)
272 2xyq_A Putative 2'-O-methyl tr 98.9 4.8E-09 1.6E-13 84.4 7.7 89 18-135 62-171 (290)
273 2p41_A Type II methyltransfera 98.9 8.7E-10 3E-14 89.3 3.0 95 19-134 82-190 (305)
274 3v97_A Ribosomal RNA large sub 98.8 1.1E-08 3.9E-13 91.4 7.9 115 9-133 180-345 (703)
275 3uzu_A Ribosomal RNA small sub 98.7 2.3E-08 7.9E-13 80.0 7.3 69 10-83 33-102 (279)
276 3ftd_A Dimethyladenosine trans 98.7 6.8E-08 2.3E-12 76.0 9.7 99 16-133 28-129 (249)
277 1yub_A Ermam, rRNA methyltrans 98.7 7.7E-10 2.6E-14 86.7 -1.6 100 16-133 26-143 (245)
278 4gqb_A Protein arginine N-meth 98.7 5.8E-08 2E-12 85.5 9.9 100 20-133 358-465 (637)
279 3lkd_A Type I restriction-modi 98.7 7.7E-08 2.6E-12 83.6 10.3 121 3-133 201-356 (542)
280 3khk_A Type I restriction-modi 98.7 1.2E-08 4.3E-13 88.6 5.2 119 3-133 229-393 (544)
281 1qyr_A KSGA, high level kasuga 98.7 1.2E-07 4.2E-12 74.7 9.8 100 8-121 10-110 (252)
282 3ua3_A Protein arginine N-meth 98.6 1.9E-07 6.6E-12 82.6 10.5 106 20-133 410-532 (745)
283 2oo3_A Protein involved in cat 98.6 4.2E-08 1.4E-12 78.2 5.7 111 8-133 81-196 (283)
284 3s1s_A Restriction endonucleas 98.6 3.4E-07 1.2E-11 82.2 10.9 120 3-133 299-463 (878)
285 2ld4_A Anamorsin; methyltransf 98.5 3.7E-08 1.3E-12 72.7 2.6 88 18-136 11-102 (176)
286 1wg8_A Predicted S-adenosylmet 98.4 1.3E-06 4.5E-11 69.5 9.5 80 18-112 21-100 (285)
287 2k4m_A TR8_protein, UPF0146 pr 98.2 7.5E-06 2.6E-10 58.9 9.0 93 9-133 24-119 (153)
288 3ufb_A Type I restriction-modi 98.1 8.8E-06 3E-10 70.5 8.9 122 3-133 201-360 (530)
289 3tka_A Ribosomal RNA small sub 98.0 1.7E-05 5.9E-10 64.6 8.4 80 19-109 57-136 (347)
290 4auk_A Ribosomal RNA large sub 98.0 1.1E-05 3.7E-10 66.6 7.3 71 18-111 210-280 (375)
291 3evf_A RNA-directed RNA polyme 97.9 9.3E-06 3.2E-10 64.3 4.4 100 19-134 74-183 (277)
292 3gcz_A Polyprotein; flavivirus 97.8 9.1E-06 3.1E-10 64.4 2.4 100 19-134 90-200 (282)
293 3pvc_A TRNA 5-methylaminomethy 97.7 4.4E-05 1.5E-09 68.0 6.2 108 19-133 58-209 (689)
294 2zig_A TTHA0409, putative modi 97.7 0.00017 6E-09 57.7 8.7 58 9-69 223-282 (297)
295 3vyw_A MNMC2; tRNA wobble urid 97.7 0.00024 8.2E-09 57.2 9.4 105 18-132 95-223 (308)
296 1i4w_A Mitochondrial replicati 97.7 0.00016 5.6E-09 59.4 8.3 59 20-83 59-117 (353)
297 3eld_A Methyltransferase; flav 97.5 0.0001 3.5E-09 58.8 5.3 100 19-134 81-190 (300)
298 2px2_A Genome polyprotein [con 97.5 5.7E-05 2E-09 59.2 3.6 93 19-133 73-181 (269)
299 3p8z_A Mtase, non-structural p 97.4 0.00074 2.5E-08 52.3 8.8 97 19-133 78-184 (267)
300 3lkz_A Non-structural protein 97.3 0.00057 1.9E-08 54.6 6.8 98 19-133 94-202 (321)
301 3r24_A NSP16, 2'-O-methyl tran 97.1 0.0013 4.5E-08 52.5 7.5 87 20-134 110-216 (344)
302 2efj_A 3,7-dimethylxanthine me 97.1 0.002 6.9E-08 53.4 8.8 79 20-110 53-158 (384)
303 1pl8_A Human sorbitol dehydrog 97.1 0.0068 2.3E-07 49.4 11.9 101 17-135 169-273 (356)
304 1f8f_A Benzyl alcohol dehydrog 97.1 0.0014 4.9E-08 53.7 7.8 102 18-137 189-291 (371)
305 2py6_A Methyltransferase FKBM; 97.1 0.0017 5.8E-08 54.3 8.2 60 18-77 225-288 (409)
306 3ps9_A TRNA 5-methylaminomethy 97.0 0.0029 9.9E-08 56.1 9.5 106 21-133 68-217 (676)
307 2dph_A Formaldehyde dismutase; 97.0 0.0032 1.1E-07 52.2 8.9 105 17-136 183-300 (398)
308 1g60_A Adenine-specific methyl 96.9 0.0021 7.1E-08 50.3 7.0 57 9-68 200-258 (260)
309 3s2e_A Zinc-containing alcohol 96.9 0.0039 1.3E-07 50.4 8.7 100 17-136 164-264 (340)
310 1g55_A DNA cytosine methyltran 96.9 0.0039 1.3E-07 50.9 8.3 75 20-110 2-77 (343)
311 1pqw_A Polyketide synthase; ro 96.8 0.0025 8.5E-08 47.4 6.4 100 18-136 37-138 (198)
312 3b5i_A S-adenosyl-L-methionine 96.8 0.0012 4.1E-08 54.7 4.6 36 20-55 53-102 (374)
313 4ej6_A Putative zinc-binding d 96.8 0.0039 1.3E-07 51.2 7.7 108 15-137 178-286 (370)
314 4a2c_A Galactitol-1-phosphate 96.8 0.019 6.6E-07 46.2 11.7 104 17-137 158-262 (346)
315 1e3j_A NADP(H)-dependent ketos 96.7 0.019 6.4E-07 46.6 11.1 104 17-135 166-271 (352)
316 1cdo_A Alcohol dehydrogenase; 96.7 0.012 4.1E-07 48.2 10.0 99 18-136 191-295 (374)
317 1e3i_A Alcohol dehydrogenase, 96.7 0.011 3.8E-07 48.4 9.8 101 18-136 194-298 (376)
318 3uko_A Alcohol dehydrogenase c 96.6 0.0047 1.6E-07 50.8 7.2 102 18-137 192-297 (378)
319 1p0f_A NADP-dependent alcohol 96.6 0.0098 3.3E-07 48.7 9.0 102 17-136 189-294 (373)
320 2c0c_A Zinc binding alcohol de 96.6 0.007 2.4E-07 49.5 7.9 100 17-136 161-262 (362)
321 1m6e_X S-adenosyl-L-methionnin 96.6 0.00095 3.2E-08 55.0 2.7 107 20-135 52-209 (359)
322 2vz8_A Fatty acid synthase; tr 96.6 0.00095 3.3E-08 67.1 3.1 102 20-136 1241-1349(2512)
323 3fpc_A NADP-dependent alcohol 96.6 0.0068 2.3E-07 49.3 7.8 104 17-137 164-268 (352)
324 3g7u_A Cytosine-specific methy 96.6 0.01 3.4E-07 49.1 8.8 77 21-110 3-80 (376)
325 4b7c_A Probable oxidoreductase 96.6 0.0048 1.6E-07 49.8 6.8 102 16-136 146-249 (336)
326 3jv7_A ADH-A; dehydrogenase, n 96.6 0.0098 3.4E-07 48.1 8.7 103 17-137 169-272 (345)
327 2jhf_A Alcohol dehydrogenase E 96.5 0.014 4.7E-07 47.8 9.5 101 18-136 190-294 (374)
328 2uyo_A Hypothetical protein ML 96.5 0.07 2.4E-06 42.9 13.2 111 19-137 102-220 (310)
329 1v3u_A Leukotriene B4 12- hydr 96.5 0.0078 2.7E-07 48.4 7.5 100 18-136 144-245 (333)
330 3fwz_A Inner membrane protein 96.5 0.022 7.6E-07 39.9 9.0 93 21-133 8-103 (140)
331 1kol_A Formaldehyde dehydrogen 96.4 0.018 6.1E-07 47.5 9.6 105 17-136 183-301 (398)
332 2fzw_A Alcohol dehydrogenase c 96.4 0.014 4.7E-07 47.8 8.7 101 18-136 189-293 (373)
333 4eez_A Alcohol dehydrogenase 1 96.4 0.035 1.2E-06 44.7 11.1 103 17-136 161-264 (348)
334 3m6i_A L-arabinitol 4-dehydrog 96.4 0.034 1.2E-06 45.2 11.0 106 16-136 176-284 (363)
335 2hcy_A Alcohol dehydrogenase 1 96.4 0.022 7.5E-07 46.1 9.6 101 18-136 168-270 (347)
336 3qwb_A Probable quinone oxidor 96.3 0.0066 2.2E-07 48.9 6.1 100 18-136 147-248 (334)
337 2c7p_A Modification methylase 96.3 0.029 9.8E-07 45.5 9.6 71 19-110 10-80 (327)
338 3ip1_A Alcohol dehydrogenase, 96.2 0.022 7.4E-07 47.2 8.9 103 18-136 212-319 (404)
339 3gms_A Putative NADPH:quinone 96.2 0.0091 3.1E-07 48.3 6.5 101 17-136 142-244 (340)
340 4eye_A Probable oxidoreductase 96.2 0.011 3.9E-07 47.8 7.0 99 18-136 158-258 (342)
341 1uuf_A YAHK, zinc-type alcohol 96.2 0.062 2.1E-06 43.9 11.5 96 17-135 192-288 (369)
342 3uog_A Alcohol dehydrogenase; 96.2 0.0081 2.8E-07 49.1 5.9 101 18-137 188-289 (363)
343 1g60_A Adenine-specific methyl 96.1 0.0046 1.6E-07 48.4 4.1 53 72-134 4-73 (260)
344 1rjw_A ADH-HT, alcohol dehydro 96.1 0.028 9.7E-07 45.3 8.8 100 17-136 162-262 (339)
345 4dup_A Quinone oxidoreductase; 96.1 0.011 3.9E-07 48.0 6.5 99 18-136 166-266 (353)
346 2qrv_A DNA (cytosine-5)-methyl 96.1 0.061 2.1E-06 42.9 10.5 77 19-110 15-92 (295)
347 3iht_A S-adenosyl-L-methionine 96.0 0.11 3.9E-06 37.4 10.6 115 8-138 27-150 (174)
348 3jyn_A Quinone oxidoreductase; 96.0 0.009 3.1E-07 48.0 5.5 100 18-136 139-240 (325)
349 1rjd_A PPM1P, carboxy methyl t 96.0 0.053 1.8E-06 44.1 10.0 115 14-136 92-234 (334)
350 1boo_A Protein (N-4 cytosine-s 96.0 0.0051 1.7E-07 49.8 3.8 53 71-133 13-82 (323)
351 4dvj_A Putative zinc-dependent 96.0 0.05 1.7E-06 44.4 9.8 97 19-134 171-269 (363)
352 1wly_A CAAR, 2-haloacrylate re 96.0 0.015 5.3E-07 46.7 6.6 99 18-135 144-244 (333)
353 2j3h_A NADP-dependent oxidored 95.9 0.011 3.7E-07 47.8 5.6 97 18-135 154-255 (345)
354 1eg2_A Modification methylase 95.9 0.0089 3.1E-07 48.3 4.9 54 71-134 37-105 (319)
355 2h6e_A ADH-4, D-arabinose 1-de 95.9 0.062 2.1E-06 43.4 9.9 99 19-136 170-270 (344)
356 1qor_A Quinone oxidoreductase; 95.8 0.012 4.1E-07 47.2 5.5 99 18-135 139-239 (327)
357 1jvb_A NAD(H)-dependent alcoho 95.8 0.028 9.5E-07 45.5 7.6 102 17-136 168-272 (347)
358 1vj0_A Alcohol dehydrogenase, 95.8 0.018 6.1E-07 47.4 6.4 102 18-136 194-299 (380)
359 2b5w_A Glucose dehydrogenase; 95.7 0.08 2.7E-06 42.9 10.0 95 21-136 174-274 (357)
360 2zb4_A Prostaglandin reductase 95.7 0.031 1.1E-06 45.3 7.4 101 17-136 156-261 (357)
361 3two_A Mannitol dehydrogenase; 95.7 0.11 3.9E-06 41.8 10.7 93 16-136 173-266 (348)
362 3gqv_A Enoyl reductase; medium 95.6 0.16 5.6E-06 41.4 11.6 98 18-135 163-263 (371)
363 2d8a_A PH0655, probable L-thre 95.6 0.036 1.2E-06 44.9 7.5 101 19-136 167-268 (348)
364 2zig_A TTHA0409, putative modi 95.6 0.011 3.7E-07 47.1 4.3 53 71-133 20-95 (297)
365 3fbg_A Putative arginate lyase 95.6 0.082 2.8E-06 42.7 9.5 95 19-133 150-246 (346)
366 3llv_A Exopolyphosphatase-rela 95.5 0.084 2.9E-06 36.6 8.3 92 20-132 6-100 (141)
367 1lss_A TRK system potassium up 95.4 0.21 7.1E-06 34.1 10.0 94 20-132 4-100 (140)
368 1yb5_A Quinone oxidoreductase; 95.4 0.036 1.2E-06 45.0 6.8 99 18-135 169-269 (351)
369 3gaz_A Alcohol dehydrogenase s 95.4 0.08 2.7E-06 42.7 8.8 95 18-134 149-245 (343)
370 2eih_A Alcohol dehydrogenase; 95.4 0.034 1.2E-06 44.9 6.5 100 18-136 165-266 (343)
371 4h0n_A DNMT2; SAH binding, tra 95.3 0.15 5E-06 41.4 10.0 75 21-110 4-78 (333)
372 2dq4_A L-threonine 3-dehydroge 95.1 0.036 1.2E-06 44.7 6.0 97 19-135 164-262 (343)
373 1piw_A Hypothetical zinc-type 95.0 0.086 2.9E-06 42.8 8.1 98 17-135 177-276 (360)
374 3c85_A Putative glutathione-re 94.9 0.12 4E-06 37.6 7.8 94 21-133 40-137 (183)
375 2j8z_A Quinone oxidoreductase; 94.9 0.078 2.7E-06 43.0 7.4 100 18-136 161-262 (354)
376 1iz0_A Quinone oxidoreductase; 94.8 0.13 4.3E-06 40.6 8.2 93 17-135 123-218 (302)
377 4a0s_A Octenoyl-COA reductase/ 94.8 0.15 5.2E-06 42.6 9.1 103 17-136 218-337 (447)
378 1yqd_A Sinapyl alcohol dehydro 94.7 0.24 8.2E-06 40.3 9.9 95 19-135 187-282 (366)
379 1id1_A Putative potassium chan 94.6 0.28 9.5E-06 34.5 8.9 97 20-133 3-103 (153)
380 2g1u_A Hypothetical protein TM 94.5 0.3 1E-05 34.4 9.0 99 18-133 17-116 (155)
381 3l9w_A Glutathione-regulated p 94.4 0.24 8.3E-06 41.3 9.4 94 20-133 4-100 (413)
382 2cf5_A Atccad5, CAD, cinnamyl 94.4 0.16 5.3E-06 41.2 8.1 96 19-136 180-276 (357)
383 3oig_A Enoyl-[acyl-carrier-pro 94.3 1.1 3.6E-05 34.4 12.3 83 18-109 5-95 (266)
384 1xa0_A Putative NADPH dependen 94.3 0.08 2.7E-06 42.3 6.0 93 22-136 152-247 (328)
385 4fgs_A Probable dehydrogenase 94.2 0.55 1.9E-05 36.9 10.6 85 11-109 20-111 (273)
386 3krt_A Crotonyl COA reductase; 94.2 0.14 4.8E-06 43.0 7.5 103 18-136 227-345 (456)
387 4fs3_A Enoyl-[acyl-carrier-pro 94.1 1.5 5E-05 33.6 13.2 80 18-109 4-94 (256)
388 2vhw_A Alanine dehydrogenase; 94.1 0.27 9.4E-06 40.4 9.0 99 18-135 166-268 (377)
389 2aef_A Calcium-gated potassium 94.1 0.78 2.7E-05 34.6 11.1 94 19-133 8-103 (234)
390 1pjc_A Protein (L-alanine dehy 94.0 0.4 1.4E-05 39.1 9.7 100 18-136 165-268 (361)
391 3qv2_A 5-cytosine DNA methyltr 93.9 0.14 4.8E-06 41.4 6.8 75 19-110 9-85 (327)
392 4dcm_A Ribosomal RNA large sub 93.8 0.24 8.1E-06 40.7 8.1 108 7-135 26-136 (375)
393 3grk_A Enoyl-(acyl-carrier-pro 93.7 1.3 4.5E-05 34.6 12.0 82 18-110 29-118 (293)
394 4f3n_A Uncharacterized ACR, CO 93.6 0.13 4.4E-06 43.2 6.2 49 18-66 136-188 (432)
395 3me5_A Cytosine-specific methy 93.5 0.3 1E-05 41.6 8.5 59 21-84 89-147 (482)
396 4a27_A Synaptic vesicle membra 93.5 0.12 4E-06 41.8 5.7 96 18-135 141-238 (349)
397 3ggo_A Prephenate dehydrogenas 93.5 0.28 9.5E-06 39.3 7.7 89 21-132 34-125 (314)
398 1jw9_B Molybdopterin biosynthe 93.4 0.62 2.1E-05 35.9 9.5 79 19-110 30-130 (249)
399 2cdc_A Glucose dehydrogenase g 93.4 0.3 1E-05 39.6 8.1 94 20-136 181-279 (366)
400 3ubt_Y Modification methylase 93.4 0.39 1.3E-05 38.3 8.5 94 22-136 2-111 (331)
401 1lnq_A MTHK channels, potassiu 93.4 0.78 2.7E-05 36.6 10.4 93 20-133 115-209 (336)
402 3ek2_A Enoyl-(acyl-carrier-pro 93.3 0.97 3.3E-05 34.5 10.5 83 17-110 11-101 (271)
403 3p2y_A Alanine dehydrogenase/p 93.2 0.47 1.6E-05 39.2 8.9 42 19-62 183-225 (381)
404 3pxx_A Carveol dehydrogenase; 93.2 1.5 5.2E-05 33.8 11.6 106 18-134 8-152 (287)
405 2vn8_A Reticulon-4-interacting 93.2 0.47 1.6E-05 38.6 8.9 97 18-135 182-280 (375)
406 3nx4_A Putative oxidoreductase 93.2 0.066 2.2E-06 42.7 3.7 92 22-136 149-242 (324)
407 2eez_A Alanine dehydrogenase; 93.2 0.62 2.1E-05 38.0 9.6 100 18-136 164-267 (369)
408 3pi7_A NADH oxidoreductase; gr 93.1 0.71 2.4E-05 37.1 9.8 97 21-136 166-264 (349)
409 3l4b_C TRKA K+ channel protien 93.1 0.46 1.6E-05 35.5 8.1 93 22-133 2-97 (218)
410 1gu7_A Enoyl-[acyl-carrier-pro 93.1 0.34 1.2E-05 39.1 7.9 105 19-136 166-276 (364)
411 3k31_A Enoyl-(acyl-carrier-pro 93.0 1.7 6E-05 33.9 11.7 81 19-110 29-117 (296)
412 1eg2_A Modification methylase 92.9 0.36 1.2E-05 38.8 7.6 75 9-87 230-312 (319)
413 1h2b_A Alcohol dehydrogenase; 92.9 0.35 1.2E-05 39.1 7.7 98 17-136 184-286 (359)
414 4eso_A Putative oxidoreductase 92.8 0.88 3E-05 34.8 9.5 83 18-110 6-91 (255)
415 1boo_A Protein (N-4 cytosine-s 92.7 0.15 5.2E-06 41.0 5.2 58 9-69 240-299 (323)
416 3pid_A UDP-glucose 6-dehydroge 92.7 1.1 3.7E-05 37.6 10.5 106 13-139 29-157 (432)
417 3t8y_A CHEB, chemotaxis respon 92.6 0.97 3.3E-05 31.7 8.9 96 28-135 9-106 (164)
418 3gg2_A Sugar dehydrogenase, UD 92.6 3.9 0.00013 34.3 13.9 100 21-138 3-125 (450)
419 3ijr_A Oxidoreductase, short c 92.5 2.1 7.3E-05 33.3 11.6 80 19-109 46-133 (291)
420 3ce6_A Adenosylhomocysteinase; 92.4 0.77 2.6E-05 39.2 9.3 87 18-133 272-359 (494)
421 4ezb_A Uncharacterized conserv 92.3 0.9 3.1E-05 36.2 9.3 89 21-133 25-119 (317)
422 4dio_A NAD(P) transhydrogenase 92.3 0.68 2.3E-05 38.5 8.6 42 19-62 189-231 (405)
423 4fn4_A Short chain dehydrogena 92.3 1.1 3.6E-05 34.8 9.3 81 18-109 5-92 (254)
424 3f6c_A Positive transcription 92.2 1.5 5.2E-05 29.1 9.2 76 46-134 3-81 (134)
425 1l7d_A Nicotinamide nucleotide 92.2 0.61 2.1E-05 38.3 8.3 42 19-62 171-213 (384)
426 3ic5_A Putative saccharopine d 92.2 1.3 4.5E-05 28.9 8.7 72 20-112 5-80 (118)
427 3ioy_A Short-chain dehydrogena 92.1 0.94 3.2E-05 36.0 9.2 84 18-110 6-96 (319)
428 1zkd_A DUF185; NESG, RPR58, st 92.0 0.38 1.3E-05 39.8 6.8 46 21-66 82-133 (387)
429 2g5c_A Prephenate dehydrogenas 92.0 0.53 1.8E-05 36.5 7.4 89 21-133 2-94 (281)
430 3gt0_A Pyrroline-5-carboxylate 91.9 0.37 1.3E-05 36.9 6.3 87 21-132 3-94 (247)
431 3hzh_A Chemotaxis response reg 91.8 2.2 7.6E-05 29.4 10.4 81 45-135 37-119 (157)
432 4e21_A 6-phosphogluconate dehy 91.7 0.7 2.4E-05 37.7 8.0 92 19-133 21-113 (358)
433 1xg5_A ARPG836; short chain de 91.6 1.3 4.4E-05 34.1 9.3 88 18-110 30-120 (279)
434 1x13_A NAD(P) transhydrogenase 91.6 0.58 2E-05 38.8 7.6 41 19-61 171-212 (401)
435 3goh_A Alcohol dehydrogenase, 91.6 0.29 9.9E-06 38.8 5.6 87 18-134 141-228 (315)
436 1dlj_A UDP-glucose dehydrogena 91.4 1.6 5.4E-05 36.1 10.0 93 22-137 2-119 (402)
437 2hmt_A YUAA protein; RCK, KTN, 91.3 0.79 2.7E-05 31.2 7.0 96 19-132 5-102 (144)
438 3ucx_A Short chain dehydrogena 91.3 2 6.7E-05 32.9 9.9 81 18-109 9-96 (264)
439 4g81_D Putative hexonate dehyd 91.2 1.6 5.3E-05 33.9 9.2 82 18-110 7-95 (255)
440 2gdz_A NAD+-dependent 15-hydro 91.1 3.1 0.00011 31.7 10.9 87 19-110 6-95 (267)
441 3edm_A Short chain dehydrogena 91.1 2.3 7.7E-05 32.5 10.1 81 18-109 6-94 (259)
442 1tt7_A YHFP; alcohol dehydroge 91.0 0.12 4.1E-06 41.3 2.7 94 22-136 153-248 (330)
443 3lyl_A 3-oxoacyl-(acyl-carrier 90.8 1.8 6E-05 32.6 9.1 81 19-110 4-91 (247)
444 3r3s_A Oxidoreductase; structu 90.8 2.6 9E-05 32.9 10.4 81 19-110 48-137 (294)
445 3hv2_A Response regulator/HD d 90.8 2.4 8.3E-05 29.0 9.2 79 44-135 14-94 (153)
446 3o38_A Short chain dehydrogena 90.7 1.3 4.5E-05 33.8 8.5 83 18-110 20-110 (266)
447 3eul_A Possible nitrate/nitrit 90.7 2.6 9E-05 28.7 9.3 80 44-135 15-97 (152)
448 3eod_A Protein HNR; response r 90.6 2.5 8.5E-05 27.8 10.7 78 44-134 7-86 (130)
449 3h8v_A Ubiquitin-like modifier 90.6 2.1 7.3E-05 33.9 9.6 61 18-80 34-114 (292)
450 3vtf_A UDP-glucose 6-dehydroge 90.6 0.47 1.6E-05 40.0 6.1 40 20-61 21-61 (444)
451 3i42_A Response regulator rece 90.6 2.5 8.5E-05 27.7 9.8 77 45-134 4-84 (127)
452 3kht_A Response regulator; PSI 90.5 2.8 9.7E-05 28.2 10.1 81 44-135 5-89 (144)
453 4g65_A TRK system potassium up 90.4 1.7 5.9E-05 36.6 9.5 72 20-110 3-77 (461)
454 3tqh_A Quinone oxidoreductase; 90.4 0.93 3.2E-05 35.9 7.5 94 16-135 149-245 (321)
455 3cg0_A Response regulator rece 90.3 2.7 9.1E-05 28.0 9.0 79 44-135 9-90 (140)
456 2zay_A Response regulator rece 90.3 2.3 7.8E-05 28.7 8.6 79 44-135 8-90 (147)
457 3lf2_A Short chain oxidoreduct 90.2 2.1 7.3E-05 32.7 9.2 84 18-110 6-96 (265)
458 3o26_A Salutaridine reductase; 90.2 1.3 4.5E-05 34.3 8.1 87 18-110 10-100 (311)
459 3qiv_A Short-chain dehydrogena 90.1 2.1 7.3E-05 32.3 9.1 86 18-110 7-95 (253)
460 3sju_A Keto reductase; short-c 90.1 1.8 6E-05 33.6 8.7 82 18-110 22-110 (279)
461 3d4o_A Dipicolinate synthase s 90.1 3.9 0.00013 32.0 10.9 88 18-132 153-241 (293)
462 3tjr_A Short chain dehydrogena 90.1 2.1 7.2E-05 33.5 9.3 86 18-110 29-117 (301)
463 3grc_A Sensor protein, kinase; 90.0 3 0.0001 27.8 9.7 78 44-134 6-87 (140)
464 2y0c_A BCEC, UDP-glucose dehyd 90.0 2.2 7.5E-05 36.1 9.8 102 18-137 6-130 (478)
465 3abi_A Putative uncharacterize 90.0 1.8 6.1E-05 35.1 9.0 69 20-110 16-86 (365)
466 3t4x_A Oxidoreductase, short c 89.9 2 6.9E-05 32.9 8.9 83 19-110 9-94 (267)
467 3svt_A Short-chain type dehydr 89.9 2.1 7.3E-05 33.0 9.1 84 18-110 9-100 (281)
468 3f1l_A Uncharacterized oxidore 89.9 2.4 8.1E-05 32.2 9.3 83 18-110 10-101 (252)
469 3i1j_A Oxidoreductase, short c 89.8 2.3 7.8E-05 31.9 9.0 83 18-110 12-103 (247)
470 3b1f_A Putative prephenate deh 89.7 2.5 8.6E-05 32.8 9.4 90 19-132 5-98 (290)
471 3nyw_A Putative oxidoreductase 89.7 1.8 6.1E-05 32.9 8.4 84 18-110 5-96 (250)
472 3cz5_A Two-component response 89.6 3.5 0.00012 28.0 9.4 80 44-135 5-87 (153)
473 1iy8_A Levodione reductase; ox 89.6 2.7 9.1E-05 32.1 9.3 88 18-110 11-101 (267)
474 3r1i_A Short-chain type dehydr 89.5 2.2 7.4E-05 33.0 8.8 82 18-110 30-118 (276)
475 2rjn_A Response regulator rece 89.5 3.7 0.00013 28.0 10.5 78 44-134 7-86 (154)
476 4g65_A TRK system potassium up 89.4 4.2 0.00014 34.2 11.1 108 8-133 222-332 (461)
477 3ojo_A CAP5O; rossmann fold, c 89.4 0.95 3.2E-05 38.0 7.0 109 20-140 11-134 (431)
478 3ksu_A 3-oxoacyl-acyl carrier 89.3 5.9 0.0002 30.2 12.2 82 18-110 9-100 (262)
479 2qr3_A Two-component system re 89.3 3.3 0.00011 27.5 8.8 78 44-134 3-87 (140)
480 4e7p_A Response regulator; DNA 89.2 3.8 0.00013 27.8 10.0 78 45-135 21-102 (150)
481 3rkr_A Short chain oxidoreduct 89.0 2.2 7.6E-05 32.5 8.5 82 18-110 27-115 (262)
482 2f1k_A Prephenate dehydrogenas 89.0 1.9 6.3E-05 33.3 8.1 86 22-132 2-88 (279)
483 4a7p_A UDP-glucose dehydrogena 89.0 6.8 0.00023 32.9 12.0 102 19-138 7-132 (446)
484 3to5_A CHEY homolog; alpha(5)b 88.8 2.9 0.0001 28.8 8.3 70 42-123 10-81 (134)
485 3lua_A Response regulator rece 88.8 3.6 0.00012 27.5 8.7 79 44-135 4-89 (140)
486 1zsy_A Mitochondrial 2-enoyl t 88.7 0.86 2.9E-05 36.7 6.2 103 18-135 166-270 (357)
487 3pk0_A Short-chain dehydrogena 88.7 2.3 7.8E-05 32.5 8.3 83 18-110 8-97 (262)
488 3is3_A 17BETA-hydroxysteroid d 88.7 6.7 0.00023 29.9 14.9 108 18-136 16-153 (270)
489 2rir_A Dipicolinate synthase, 88.6 7.2 0.00025 30.5 11.4 88 18-132 155-243 (300)
490 3gaf_A 7-alpha-hydroxysteroid 88.5 2.2 7.4E-05 32.6 8.1 82 18-110 10-98 (256)
491 3tri_A Pyrroline-5-carboxylate 88.4 1 3.5E-05 35.2 6.3 88 20-132 3-95 (280)
492 2wyu_A Enoyl-[acyl carrier pro 88.3 4.5 0.00015 30.8 9.8 85 19-110 7-95 (261)
493 3jte_A Response regulator rece 88.2 4.2 0.00014 27.2 11.1 80 45-135 4-85 (143)
494 1yb1_A 17-beta-hydroxysteroid 88.2 4.5 0.00015 30.9 9.8 85 19-110 30-117 (272)
495 3rqi_A Response regulator prot 88.2 4.5 0.00015 28.7 9.3 79 44-135 7-87 (184)
496 3ilh_A Two component response 88.1 4.3 0.00015 27.1 9.8 84 45-134 10-99 (146)
497 1qkk_A DCTD, C4-dicarboxylate 87.9 4.8 0.00016 27.4 9.2 79 44-135 3-83 (155)
498 3tfo_A Putative 3-oxoacyl-(acy 87.8 2.9 0.0001 32.2 8.5 81 19-110 3-90 (264)
499 3v8b_A Putative dehydrogenase, 87.8 2.9 9.7E-05 32.5 8.5 82 18-110 26-114 (283)
500 3rih_A Short chain dehydrogena 87.7 2.1 7.1E-05 33.6 7.7 82 19-110 40-128 (293)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.5e-33 Score=221.47 Aligned_cols=180 Identities=40% Similarity=0.713 Sum_probs=161.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|+++++++++|..++...++++|||||||+|+++++++..++++++|+++|+++++++.|+++++..++.++++++.+|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 57899999999999999999999999999999999999998767999999999999999999999999988999999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+..+ ...++||+||+|++...+..+++.+.++|+|||+|+++|++|.|.+..+...+ ...+.
T Consensus 122 ~~~l~~~~~~------~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~------~~~~~ 189 (242)
T 3r3h_A 122 LDTLHSLLNE------GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTS------GQTRE 189 (242)
T ss_dssp HHHHHHHHHH------HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCC------HHHHH
T ss_pred HHHHHHHhhc------cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccC------hHHHH
Confidence 8887765321 01368999999999888999999999999999999999999999988776543 34568
Q ss_pred HHHHHHHhhcCCCeeEEEeecCCeeEEEEEcC
Q 029536 161 VQELNKALAVDPRIEICQISIADGVTLCRRIG 192 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~~ 192 (192)
+++|++.+..+++++.+++|+++|+.+++|++
T Consensus 190 ~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~~ 221 (242)
T 3r3h_A 190 IKKLNQVIKNDSRVFVSLLAIADGMFLVQPIA 221 (242)
T ss_dssp HHHHHHHHHTCCSEEEEEESSSSCEEEEEEC-
T ss_pred HHHHHHHHhhCCCEEEEEEEccCceEEEEEcC
Confidence 99999999999999999999999999999975
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.1e-33 Score=218.16 Aligned_cols=174 Identities=14% Similarity=0.270 Sum_probs=157.8
Q ss_pred CCCHHHHHHHHHHHhHcCCC---EEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC-CceEEEe
Q 029536 2 MTSPDEAQFFSMLLKLINAK---NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFRE 77 (192)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~---~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~ 77 (192)
.++++++++|..++...+++ +|||||||+|++++++++.++++++|+++|+++++++.|+++++..++. ++++++.
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 36799999999999999988 9999999999999999999876899999999999999999999999997 7999999
Q ss_pred CCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhH
Q 029536 78 GPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYL 157 (192)
Q Consensus 78 ~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~ 157 (192)
+|+.+.++.+. .++||+||+|++..++..+++.+.++|+|||+++++|++|.|.+.++...+ ..
T Consensus 116 gda~~~l~~~~----------~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~------~~ 179 (221)
T 3dr5_A 116 SRPLDVMSRLA----------NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKD------RD 179 (221)
T ss_dssp SCHHHHGGGSC----------TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCC------HH
T ss_pred cCHHHHHHHhc----------CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCC------hH
Confidence 99988766542 578999999999999999999999999999999999999999988775432 44
Q ss_pred HHHHHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 158 RDFVQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
...+++|++.+..+|+++.+++|+|+|+.+++|-
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 180 TQAARDADEYIRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEESSTTCEEEEEEC
T ss_pred HHHHHHHHHHHhhCCCeeEEEeeccchHHHHHHH
Confidence 5578999999999999999999999999999983
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=2.8e-32 Score=214.62 Aligned_cols=185 Identities=58% Similarity=0.975 Sum_probs=163.2
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|+++++++++|..++...++++|||||||+|++++++++.++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999998867999999999999999999999999977899999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+..+ +...++||+||+|+++..+..+++.+.++|+|||+|+++|++|.|.+..+...+ ..+.+...+.
T Consensus 132 ~~~l~~l~~~-----~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~-~~~~r~~~~~ 205 (237)
T 3c3y_A 132 MLALDNLLQG-----QESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEV-PDFMKENREA 205 (237)
T ss_dssp HHHHHHHHHS-----TTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGS-CGGGHHHHHH
T ss_pred HHHHHHHHhc-----cCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccc-hhhHHHHHHH
Confidence 8887765321 001368999999999889999999999999999999999999999987764322 2245567789
Q ss_pred HHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 161 VQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
+++|++++..++++..+++|++||+.+++|+
T Consensus 206 i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 206 VIELNKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp HHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 9999999999999999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=3e-32 Score=215.81 Aligned_cols=186 Identities=79% Similarity=1.283 Sum_probs=163.0
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|++++++++++..++...++++|||||||+|+++++++..++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 56889999999999999999999999999999999999998767999999999999999999999999988999999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+..+ +...++||+||+|++...+..+++.+.++|+|||+|+++|++|.|.+..+...+.....+...+.
T Consensus 141 ~~~l~~l~~~-----~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~ 215 (247)
T 1sui_A 141 LPVLDEMIKD-----EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDF 215 (247)
T ss_dssp HHHHHHHHHS-----GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHhc-----cCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHH
Confidence 8887765321 00036899999999988899999999999999999999999999998877543322222456788
Q ss_pred HHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 161 VQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
+++|++.+..++++..+.+|+++|+.+++|+
T Consensus 216 i~~~~~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 216 VLELNKALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp HHHHHHHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred HHHHHHHHhhCCCeEEEEEecCCccEEEEEc
Confidence 9999999999999999999999999999986
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=2.9e-31 Score=206.17 Aligned_cols=180 Identities=34% Similarity=0.591 Sum_probs=160.8
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|++++..++++..++...++.+|||||||+|.++.+++..++++++++++|+++++++.|+++++..++.++++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 46789999999999999999999999999999999999988767899999999999999999999999988899999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+... ...++||+||+|++...+..+++.+.++|+|||+++++|+.|.|.+..+.... .....
T Consensus 126 ~~~~~~~~~~------~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~------~~~~~ 193 (225)
T 3tr6_A 126 KDTLAELIHA------GQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQS------ENNQL 193 (225)
T ss_dssp HHHHHHHHTT------TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCC------HHHHH
T ss_pred HHHHHHhhhc------cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccC------hHHHH
Confidence 8877665311 00178999999999888999999999999999999999999999887766532 44578
Q ss_pred HHHHHHHhhcCCCeeEEEeecCCeeEEEEEcC
Q 029536 161 VQELNKALAVDPRIEICQISIADGVTLCRRIG 192 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~~ 192 (192)
+++|++.+..+++++.+++|+++|+.+++|+|
T Consensus 194 ~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~~ 225 (225)
T 3tr6_A 194 IRLFNQKVYKDERVDMILIPIGDGLTLARKKS 225 (225)
T ss_dssp HHHHHHHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHHHHHHhcCCCeEEEEEEcCCccEEEEECC
Confidence 99999999999999999999999999999987
No 6
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=4.8e-31 Score=206.83 Aligned_cols=177 Identities=43% Similarity=0.675 Sum_probs=160.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|.+++.+++++..++...++++|||||||+|+++.+++..++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 54 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 133 (232)
T 3cbg_A 54 MQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA 133 (232)
T ss_dssp GSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 57899999999999999999999999999999999999988767899999999999999999999999877899999999
Q ss_pred hhHHHHHHhhhhcccccCC--CcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHH
Q 029536 81 LPLLDQLIQDVSSTKEKYH--GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLR 158 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~--~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~ 158 (192)
.+.++.+... . ++||+||+|.+...+..+++.+.++|+|||+|+++|+.|.|.+..+... +...
T Consensus 134 ~~~l~~l~~~--------~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~------~~~~ 199 (232)
T 3cbg_A 134 LATLEQLTQG--------KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQ------EAQT 199 (232)
T ss_dssp HHHHHHHHTS--------SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCC------SHHH
T ss_pred HHHHHHHHhc--------CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccC------ChHH
Confidence 8877766421 2 7899999999988899999999999999999999999999998876543 3566
Q ss_pred HHHHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 159 DFVQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
..+++|++.+..++++..+++|+++|+.+++|+
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 200 QVLQQFNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHHHHHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 789999999999999999999999999999985
No 7
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.98 E-value=7e-31 Score=205.81 Aligned_cols=177 Identities=21% Similarity=0.277 Sum_probs=158.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh
Q 029536 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 82 (192)
+.++.++++..++...++.+|||||||+|.++.+++...+ +++|+++|+++++++.|+++++..++.++++++.+|+.+
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 5788999999999999999999999999999999998766 789999999999999999999999998899999999988
Q ss_pred HHH-HHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHHH
Q 029536 83 LLD-QLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFV 161 (192)
Q Consensus 83 ~~~-~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (192)
.++ .+ .++||+||++.....+..+++.+.++|+|||+++++|++|.|.+..+... .+++.......+
T Consensus 134 ~~~~~~-----------~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~-~~~~~~~~~~~~ 201 (232)
T 3ntv_A 134 QFENVN-----------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIV-RSRNVRQMVKKV 201 (232)
T ss_dssp CHHHHT-----------TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGG-GCHHHHHHHHHH
T ss_pred HHHhhc-----------cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccc-cchhhhHHHHHH
Confidence 776 54 57899999999999999999999999999999999999999988766541 123345667889
Q ss_pred HHHHHHhhcCCCeeEEEeecCCeeEEEEEcC
Q 029536 162 QELNKALAVDPRIEICQISIADGVTLCRRIG 192 (192)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~~ 192 (192)
++|++.+..+++++.+++|+++|+.+++|+|
T Consensus 202 ~~~~~~l~~~~~~~~~~lp~~dG~~i~~k~~ 232 (232)
T 3ntv_A 202 QDYNEWLIKQPGYTTNFLNIDDGLAISIKGE 232 (232)
T ss_dssp HHHHHHHHTCTTEEEEEECSTTCEEEEEEC-
T ss_pred HHHHHHHhcCCCeEEEEEEcCCceEEEEECC
Confidence 9999999999999999999999999999997
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.97 E-value=4.5e-30 Score=199.31 Aligned_cols=178 Identities=27% Similarity=0.478 Sum_probs=160.2
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|++++..++++..++...++++|||||||+|.++.+++..++++++++++|+++++++.|++++...++.++++++.+|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (223)
T 3duw_A 40 HDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA 119 (223)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999998767899999999999999999999999988899999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+... ..++||+||+|.....+..+++.+.++|+|||+++++|+.+.|.+..+.... .....
T Consensus 120 ~~~~~~~~~~-------~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~------~~~~~ 186 (223)
T 3duw_A 120 LDSLQQIENE-------KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSND------PRVQG 186 (223)
T ss_dssp HHHHHHHHHT-------TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCC------HHHHH
T ss_pred HHHHHHHHhc-------CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccc------hHHHH
Confidence 8877766432 1267999999999888999999999999999999999999999887766543 45678
Q ss_pred HHHHHHHhhcCCCeeEEEeec-----CCeeEEEEEc
Q 029536 161 VQELNKALAVDPRIEICQISI-----ADGVTLCRRI 191 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~-----~~G~~i~~k~ 191 (192)
+++|++.+..+++++.+++|+ ++|+.+++++
T Consensus 187 ~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 187 IRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred HHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 899999999999999999999 9999999986
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.97 E-value=4.3e-30 Score=203.36 Aligned_cols=177 Identities=32% Similarity=0.514 Sum_probs=159.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|++++..+++|..++...++++|||||||+|.++.+++..++++++|+++|+++++++.|+++++..++.++++++.+|+
T Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 124 (248)
T 3tfw_A 45 HDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA 124 (248)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999998767899999999999999999999999988999999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+. ..++||+||+|.+...+..+++.+.++|+|||+|+++|+++.|.+..+... +.....
T Consensus 125 ~~~l~~~~---------~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~------~~~~~~ 189 (248)
T 3tfw_A 125 LQSLESLG---------ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSA------DERVQG 189 (248)
T ss_dssp HHHHHTCC---------SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCC------CHHHHH
T ss_pred HHHHHhcC---------CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCcccc------chHHHH
Confidence 88776541 134899999999988899999999999999999999999999998876654 356678
Q ss_pred HHHHHHHhhcCCCeeEEEe-ecC----CeeEEEEEcC
Q 029536 161 VQELNKALAVDPRIEICQI-SIA----DGVTLCRRIG 192 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~-p~~----~G~~i~~k~~ 192 (192)
+++|++.+..+++++.+.+ |++ ||+.+++|++
T Consensus 190 ~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~~ 226 (248)
T 3tfw_A 190 VRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVNA 226 (248)
T ss_dssp HHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEEECC
T ss_pred HHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEeC
Confidence 9999999999999999988 677 9999999985
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.97 E-value=5.5e-30 Score=199.45 Aligned_cols=179 Identities=39% Similarity=0.668 Sum_probs=159.4
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|.++++.+++|..++...++++|||||||+|.++.++++.++.+++++++|+++.+++.|+++++..++.++++++.+|+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 46789999999999999999999999999999999999988767899999999999999999999999888999999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
.+.++.+..+ + ..++||+||+|.+...+..+++.+.++|+|||+++++|++|.|.+..+... +.....
T Consensus 131 ~~~~~~~~~~-----~-~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~~~~~~ 198 (229)
T 2avd_A 131 LETLDELLAA-----G-EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKG------DVAAEC 198 (229)
T ss_dssp HHHHHHHHHT-----T-CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTT------CHHHHH
T ss_pred HHHHHHHHhc-----C-CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccC------ChHHHH
Confidence 8877665321 0 016899999999988899999999999999999999999999988776543 356778
Q ss_pred HHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 161 VQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
+++|++.+..++++..+++|+++|+.+++|+
T Consensus 199 ~~~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 199 VRNLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 9999999999999999999999999999985
No 11
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.96 E-value=6.8e-29 Score=191.26 Aligned_cols=172 Identities=17% Similarity=0.244 Sum_probs=146.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 2 MTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
.+.+..+.++..++...++++|||||||+|.++.+++..++++++++++|+++.+++.|+++++..++.++++++.+|+.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 36788999999999888999999999999999999999887578999999999999999999999888778999999998
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHHH
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFV 161 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (192)
+.++.. .+ ||+||+|.....+..+++.+.++|+|||+++++|++|.|.+..+ .. +...+.+
T Consensus 119 ~~~~~~-----------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~-~~------~~~~~~~ 179 (210)
T 3c3p_A 119 GIAAGQ-----------RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAES-HE------DPETAAL 179 (210)
T ss_dssp HHHTTC-----------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC-------------------CC
T ss_pred HHhccC-----------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCc-cc------chHHHHH
Confidence 765533 45 99999999888899999999999999999999999998876633 11 2344567
Q ss_pred HHHHHHhhcCCCeeEEEeecCCeeEEEEEcC
Q 029536 162 QELNKALAVDPRIEICQISIADGVTLCRRIG 192 (192)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~~ 192 (192)
++|++.+..++++....+|+++|+.+++|+|
T Consensus 180 ~~~~~~l~~~~~~~~~~~p~~~G~~~~~~~~ 210 (210)
T 3c3p_A 180 REFNHHLSRRRDFFTTIVPVGNGVLLGYRLS 210 (210)
T ss_dssp CHHHHHHTTCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHHHHHhhCCCeEEEEEecCCceEEEEeCC
Confidence 8899999999999999999999999999987
No 12
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.96 E-value=4.1e-28 Score=190.54 Aligned_cols=185 Identities=37% Similarity=0.581 Sum_probs=158.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|.+.+..++++..++...++++|||||||+|.++..+++.+++.++++++|+++.+++.|++++...+..++++++.+|.
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 57889999999999999999999999999999999999998757899999999999999999999998877899999999
Q ss_pred hhHHHHHHhh---hhcccccCC--CcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhh
Q 029536 81 LPLLDQLIQD---VSSTKEKYH--GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFL 155 (192)
Q Consensus 81 ~~~~~~~~~~---~~~~~~~~~--~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~ 155 (192)
.+.++.+... ..-...+.. ++||+|+++.....+..+++.+.+.|+|||+++++++.|.|.+..+... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~ 195 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ------E 195 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCC------C
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCcccc------c
Confidence 8776654210 000000111 6899999999888889999999999999999999999999988766543 3
Q ss_pred hHHHHHHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 156 YLRDFVQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
.....+++|++.+..++++...++|+++|+.+++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 196 PSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 566788999999999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=2e-27 Score=184.53 Aligned_cols=165 Identities=22% Similarity=0.359 Sum_probs=141.6
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
|+++++.+++|..++...++++|||||||+|.+++++++.++++++|+++|+++.+++.|+++++..++.++++++.+|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 56889999999999999999999999999999999999987667899999999999999999999999988899999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHH---HHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhH
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVN---YHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYL 157 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~---~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~ 157 (192)
.+.++.+... ...++||+||+|.....+.. +++.+ ++|+|||+++++|+.+.+.
T Consensus 120 ~~~l~~~~~~------~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~---------------- 176 (221)
T 3u81_A 120 QDLIPQLKKK------YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGT---------------- 176 (221)
T ss_dssp HHHGGGTTTT------SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCC----------------
T ss_pred HHHHHHHHHh------cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcch----------------
Confidence 8776654210 01268999999998766664 44444 8999999999999987642
Q ss_pred HHHHHHHHHHhhcCCCeeEEEee-------cCCeeEEEEEcC
Q 029536 158 RDFVQELNKALAVDPRIEICQIS-------IADGVTLCRRIG 192 (192)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p-------~~~G~~i~~k~~ 192 (192)
.+|.+++.+++++....+| +++|+.+++++|
T Consensus 177 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~g 214 (221)
T 3u81_A 177 ----PDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQG 214 (221)
T ss_dssp ----HHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEECC
T ss_pred ----HHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEeC
Confidence 5677788889999999998 799999999987
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.94 E-value=1.2e-25 Score=175.56 Aligned_cols=178 Identities=25% Similarity=0.404 Sum_probs=139.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 2 MTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
.+.++.+.++..++...++.+|||+|||+|.++..++..++ +++++++|+++.+++.|++++...++.++++++.+|+.
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 36788899999999989999999999999999999999987 78999999999999999999999998778999999998
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHHH
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFV 161 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (192)
+.++... ..++||+|+++.....+..+++.+.+.|+|||+++++|+++.|.+..+... .+..+.....+
T Consensus 116 ~~~~~~~---------~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~--~~~~~~~~~~~ 184 (233)
T 2gpy_A 116 QLGEKLE---------LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDIE--HKRHKQLATKI 184 (233)
T ss_dssp GSHHHHT---------TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC-----------------------
T ss_pred HHHHhcc---------cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCcccc--ccchhHHHHHH
Confidence 7665431 136899999999887889999999999999999999999998866443210 11112334567
Q ss_pred HHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 162 QELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
++|++.+..++.+...++|+++|+.+++|+
T Consensus 185 ~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 185 DTYNQWLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp ----CTTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 788888999999999999999999999986
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.83 E-value=1.4e-19 Score=138.47 Aligned_cols=129 Identities=15% Similarity=0.084 Sum_probs=101.9
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC--CCceEEEeC
Q 029536 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV--AHKIDFREG 78 (192)
Q Consensus 1 m~~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~ 78 (192)
+.+++++++||+. ...++++|||+|| |+||+++|+. + +++|+++|.+++..+.|+++++++++ .++++++.+
T Consensus 14 ~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~g 87 (202)
T 3cvo_A 14 LTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWT 87 (202)
T ss_dssp CCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEEC
T ss_pred ccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 3578999999998 4457899999998 6899999984 4 79999999999999999999999998 789999999
Q ss_pred CchhH--------------HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 79 PALPL--------------LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 79 d~~~~--------------~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
|+.+. ++....++-. -...++||+||+|+.+. ...+..+.++|+|||+|++||+.+.
T Consensus 88 da~~~~~wg~p~~~~~~~~l~~~~~~i~~--~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DNv~~r 158 (202)
T 3cvo_A 88 DIGPTGDWGHPVSDAKWRSYPDYPLAVWR--TEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDDYSQR 158 (202)
T ss_dssp CCSSBCGGGCBSSSTTGGGTTHHHHGGGG--CTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETTGGGC
T ss_pred CchhhhcccccccchhhhhHHHHhhhhhc--cccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeCCcCC
Confidence 96542 2221100000 00137899999999865 3667778899999999999997654
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.82 E-value=1e-19 Score=146.01 Aligned_cols=161 Identities=16% Similarity=0.098 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHhH----cCCCEEEEEccchhHHHHHHHHhCC----CCcEEEEEeCCch-------------------
Q 029536 3 TSPDEAQFFSMLLKL----INAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKE------------------- 55 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~----~~~~~ileiG~g~G~~~~~la~~~~----~~~~v~~vD~~~~------------------- 55 (192)
++++...+|+.+++. ..|..|||+|++.|+|+++++..++ ++.+++++|..+.
T Consensus 86 v~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~ 165 (282)
T 2wk1_A 86 IGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHR 165 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGG
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccc
Confidence 567788888888775 4589999999999999999988764 2688999996421
Q ss_pred -------hHHHHHHHHHHcCCC-CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC-cCcHHHHHHHHhccC
Q 029536 56 -------HYEKGLPIIQKAGVA-HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK-DNYVNYHKRLIELVK 126 (192)
Q Consensus 56 -------~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~-~~~~~~~~~~~~~L~ 126 (192)
.++.+++++++.|+. ++++++.|++.+.++.+. .++||+|++|+++ +.+..+++.+.++|+
T Consensus 166 ~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~----------~~~~d~vfIDaD~y~~~~~~Le~~~p~L~ 235 (282)
T 2wk1_A 166 RNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP----------IDTLAVLRMDGDLYESTWDTLTNLYPKVS 235 (282)
T ss_dssp GHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC----------CCCEEEEEECCCSHHHHHHHHHHHGGGEE
T ss_pred ccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC----------CCCEEEEEEcCCccccHHHHHHHHHhhcC
Confidence 467789999999994 899999999998887642 4689999999996 557889999999999
Q ss_pred CCeEEEEeCccCCccccCCCCCCchhhhhhHHHHHHHHHHHhhcCCCeeEEEeecCCeeEEEEEcC
Q 029536 127 VGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNKALAVDPRIEICQISIADGVTLCRRIG 192 (192)
Q Consensus 127 ~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~~ 192 (192)
|||+|++||+.+. ....+++++|++. .++...+.+++.+...-+|.|
T Consensus 236 pGGiIv~DD~~~~---------------~G~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk~~ 282 (282)
T 2wk1_A 236 VGGYVIVDDYMMC---------------PPCKDAVDEYRAK----FDIADELITIDRDGVYWQRTR 282 (282)
T ss_dssp EEEEEEESSCTTC---------------HHHHHHHHHHHHH----TTCCSCCEECSSSCEEEECCC
T ss_pred CCEEEEEcCCCCC---------------HHHHHHHHHHHHh----cCCceEEEEecCEEEEEEeCC
Confidence 9999999998531 2345566666433 345667788887777777653
No 17
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.76 E-value=4.5e-18 Score=138.23 Aligned_cols=149 Identities=17% Similarity=0.256 Sum_probs=114.5
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHH--cCC-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK--AGV-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||+|..++.+++..+ ..+++++|+++.+++.|++++.. .++ .++++++.+|+.++++..
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------ 165 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------ 165 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------
Confidence 35789999999999999999998754 68999999999999999999875 344 478999999998876542
Q ss_pred ccccCCCcccEEEEeCCCc-------CcHHHHHHHHhccCCCeEEEEeCc-cCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029536 94 TKEKYHGTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYDNT-LWGGSVVAPPDADLDEHFLYLRDFVQELN 165 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~d~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (192)
.++||+|++|.... ...++++.+.+.|+|||+++++.. .|.. ....+.++++.
T Consensus 166 -----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--------------~~~~~~~~~~l 226 (304)
T 2o07_A 166 -----QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--------------LDLIKEMRQFC 226 (304)
T ss_dssp -----SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--------------HHHHHHHHHHH
T ss_pred -----CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--------------hHHHHHHHHHH
Confidence 57899999997631 235789999999999999998762 2221 13345566777
Q ss_pred HHhhcCCCeeEEEeec---C-CeeEEEEEc
Q 029536 166 KALAVDPRIEICQISI---A-DGVTLCRRI 191 (192)
Q Consensus 166 ~~~~~~~~~~~~~~p~---~-~G~~i~~k~ 191 (192)
+.+..+.++....+|. | .|+.++.|.
T Consensus 227 ~~~f~~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 227 QSLFPVVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp HHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHhCCCceeEEEEeccccCcceEEEEEeCC
Confidence 7777777777777775 3 588888764
No 18
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.75 E-value=6.7e-18 Score=137.78 Aligned_cols=150 Identities=17% Similarity=0.224 Sum_probs=111.9
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CC-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||+|..++.+++..+ ..+++++|+++.+++.|++++... ++ .++++++.+|+.++++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------ 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------
Confidence 45789999999999999999998754 689999999999999999998654 33 478999999998876542
Q ss_pred ccccCCCcccEEEEeCCC------cCc-HHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHHHHHHHH
Q 029536 94 TKEKYHGTFDFVFVDADK------DNY-VNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNK 166 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~------~~~-~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (192)
.++||+|++|... ..+ .++++.+.+.|+|||++++.... ... . ......+.++.+
T Consensus 179 -----~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~----~~~--~-------~~~~~~~~~~l~ 240 (314)
T 2b2c_A 179 -----KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES----VWL--H-------LPLIAHLVAFNR 240 (314)
T ss_dssp -----TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCC----TTT--C-------HHHHHHHHHHHH
T ss_pred -----CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC----ccc--C-------HHHHHHHHHHHH
Confidence 6789999998741 112 68899999999999999987521 110 0 123344556666
Q ss_pred HhhcCCCeeEEEeec---CC-eeEEEEEc
Q 029536 167 ALAVDPRIEICQISI---AD-GVTLCRRI 191 (192)
Q Consensus 167 ~~~~~~~~~~~~~p~---~~-G~~i~~k~ 191 (192)
.+..+..+....+|+ |+ |+.++.|.
T Consensus 241 ~vF~~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 241 KIFPAVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHCCcceEEEEEecCcCCCceEEEEEeCC
Confidence 666666777777785 45 88888864
No 19
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.75 E-value=6.5e-18 Score=132.52 Aligned_cols=116 Identities=19% Similarity=0.308 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHh---CCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALA---IPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
++...++..++...++.+|||||||+|+++..+++. +.++++|+++|+++++++.|+ +..++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 788889999888888999999999999999999987 334789999999999998887 22368999999987
Q ss_pred hH--HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHh-ccCCCeEEEEeCc
Q 029536 82 PL--LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIE-LVKVGGVIGYDNT 136 (192)
Q Consensus 82 ~~--~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~-~L~~gG~lv~~d~ 136 (192)
+. ++.. ...+||+|++++.+..+..++..+.+ .|+|||+++++|+
T Consensus 141 ~~~~l~~~----------~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHL----------REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGG----------SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhh----------ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 64 3322 13479999999987778889999996 9999999999886
No 20
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.72 E-value=2.3e-16 Score=127.11 Aligned_cols=108 Identities=16% Similarity=0.102 Sum_probs=91.8
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
++...++.+|||||||+|..+..++...+ +++|+++|+++++++.|++++++.++ ++++++++|+.++ +
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~-------- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D-------- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G--------
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C--------
Confidence 55667889999999999876544433344 78999999999999999999999999 8999999999764 1
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+++||+||+++...++..+++.+.+.|||||.+++.+..
T Consensus 186 -----d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 186 -----GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp -----GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -----CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 468999999887778889999999999999999997743
No 21
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.72 E-value=1.2e-16 Score=123.08 Aligned_cols=168 Identities=15% Similarity=0.108 Sum_probs=115.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC----ceEEEeCC
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH----KIDFREGP 79 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d 79 (192)
.+...+.+..++...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++.. +++++.+|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 345556666667777889999999999999999998765 5899999999999999999998777654 89999999
Q ss_pred chhHHHHHHhhhhcccccCCCcccEEEEeCCCc-----CcHHHHHHHHhccCCCeEEEEeCccCCcccc--CCCCC--Cc
Q 029536 80 ALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNTLWGGSVV--APPDA--DL 150 (192)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~--~~~~~--~~ 150 (192)
.... +. ..++||+|++..... ....+++.+.+.|+|||+++.......+... .+... ..
T Consensus 93 ~~~~-~~-----------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~ 160 (219)
T 3jwg_A 93 LVYR-DK-----------RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHR 160 (219)
T ss_dssp SSSC-CG-----------GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGG
T ss_pred cccc-cc-----------ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCccccccc
Confidence 8432 11 157899999876522 2357889999999999988765433221111 00000 00
Q ss_pred hhhhhhHHHHHHHHHHHhhcCCCeeEEEeecCCe
Q 029536 151 DEHFLYLRDFVQELNKALAVDPRIEICQISIADG 184 (192)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G 184 (192)
........+.++++.+.+....+|...+.+++++
T Consensus 161 ~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 161 DHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp CCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred CceeeecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 0011123345555555566666788888866644
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=2.7e-16 Score=118.61 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=89.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..++.++.. + ..+|+++|+++++++.|+++++..++ ++++++++|..+..+.+.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~--------- 110 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGT--------- 110 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCC---------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhcc---------
Confidence 57789999999999999988764 2 56899999999999999999999888 789999999988765432
Q ss_pred CCCcccEEEEeCCCcC----cHHHHHHHHh--ccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDADKDN----YVNYHKRLIE--LVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~----~~~~~~~~~~--~L~~gG~lv~~d~ 136 (192)
.++||+|+++.+... ....++.+.+ .|+|||++++...
T Consensus 111 -~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 111 -TSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp -SSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred -CCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 578999999987433 5677888888 9999999998654
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.71 E-value=6.7e-17 Score=124.37 Aligned_cols=168 Identities=14% Similarity=0.123 Sum_probs=116.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC----ceEEEeCC
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH----KIDFREGP 79 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d 79 (192)
.+...+++..++...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...++.. +++++.+|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 445566677777777889999999999999999998755 5799999999999999999998777754 89999999
Q ss_pred chhHHHHHHhhhhcccccCCCcccEEEEeCCCc-----CcHHHHHHHHhccCCCeEEEEeCccCCcccc--CCCC--CCc
Q 029536 80 ALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNTLWGGSVV--APPD--ADL 150 (192)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~--~~~~--~~~ 150 (192)
.... +. ..++||+|++..... ....+++.+.+.|+|||++++......+... .+.. ...
T Consensus 93 ~~~~-~~-----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~ 160 (217)
T 3jwh_A 93 LTYQ-DK-----------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHK 160 (217)
T ss_dssp TTSC-CG-----------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC----------
T ss_pred cccc-cc-----------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccccccccc
Confidence 7432 11 147899999876522 3367889999999999988875442111110 0000 000
Q ss_pred hhhhhhHHHHHHHHHHHhhcCCCeeEEEeecCCe
Q 029536 151 DEHFLYLRDFVQELNKALAVDPRIEICQISIADG 184 (192)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G 184 (192)
........+.++++.+.+....+|.....++++.
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 161 DHRFEWTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp -CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred ccccccCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 0011123445666666666777898888877653
No 24
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.71 E-value=1.6e-16 Score=121.19 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=99.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
..+....+...+...++.+|||+|||+|..+..++...+ ..+++++|+++++++.|+++++..++ ++++++.+|..+.
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhh
Confidence 344444444445556778999999999999999999875 78999999999999999999999888 7899999998655
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
++. .++||+|+++........+++.+.+.|+|||.+++...
T Consensus 103 ~~~------------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 103 LDD------------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CTT------------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhc------------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 332 36799999998766788999999999999999998644
No 25
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.70 E-value=1.4e-16 Score=129.89 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=108.4
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--C-C-CCceEEEeCCchhHHHHHHhhh
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--G-V-AHKIDFREGPALPLLDQLIQDV 91 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~-~~~v~~~~~d~~~~~~~~~~~~ 91 (192)
...++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... + + .++++++.+|+.++++..
T Consensus 74 ~~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~---- 148 (314)
T 1uir_A 74 THPEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT---- 148 (314)
T ss_dssp HSSCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC----
T ss_pred cCCCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc----
Confidence 345789999999999999999998754 689999999999999999998652 2 2 468999999998876542
Q ss_pred hcccccCCCcccEEEEeCCCcC----------cHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHHHHH
Q 029536 92 SSTKEKYHGTFDFVFVDADKDN----------YVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFV 161 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~~~~----------~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (192)
.++||+|++|..... ..++++.+.+.|+|||++++... .... .. ......+
T Consensus 149 -------~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~~~-~~-------~~~~~~~ 209 (314)
T 1uir_A 149 -------EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG----MILL-TH-------HRVHPVV 209 (314)
T ss_dssp -------CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE----EECC-----------CHHHHH
T ss_pred -------CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc----Cccc-cC-------HHHHHHH
Confidence 678999999976432 47899999999999999997521 1110 00 0122233
Q ss_pred HHHHHHhhcCCCeeEEEeecCCe---eEEEEEc
Q 029536 162 QELNKALAVDPRIEICQISIADG---VTLCRRI 191 (192)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~G---~~i~~k~ 191 (192)
.+..+.+..+..+....+|..+| +.++.|.
T Consensus 210 ~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 210 HRTVREAFRYVRSYKNHIPGFFLNFGFLLASDA 242 (314)
T ss_dssp HHHHHTTCSEEEEEEEEEGGGTEEEEEEEEESS
T ss_pred HHHHHHHCCceEEEEEecCCCCCeEEEEEEECC
Confidence 33333434444455666787555 6677653
No 26
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.70 E-value=1.3e-16 Score=131.22 Aligned_cols=112 Identities=21% Similarity=0.307 Sum_probs=91.5
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CC-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||+|..++.+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.++++...
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~----- 191 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA----- 191 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSC-----
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhcc-----
Confidence 35788999999999999999998754 689999999999999999998753 44 3689999999988765431
Q ss_pred ccccCCCcccEEEEeCCC-----c--CcHHHHHHHHhccCCCeEEEEe-CccCC
Q 029536 94 TKEKYHGTFDFVFVDADK-----D--NYVNYHKRLIELVKVGGVIGYD-NTLWG 139 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~-----~--~~~~~~~~~~~~L~~gG~lv~~-d~~~~ 139 (192)
.++||+|++|... . .+.++++.+.+.|+|||+++++ +..|.
T Consensus 192 -----~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 192 -----EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp -----TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred -----CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 4689999998751 1 1578999999999999999986 44443
No 27
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.70 E-value=1.4e-16 Score=118.33 Aligned_cols=112 Identities=17% Similarity=0.173 Sum_probs=91.3
Q ss_pred HHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhh
Q 029536 11 FSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQD 90 (192)
Q Consensus 11 l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 90 (192)
+...+...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...+...++ ++.+|..+.++..
T Consensus 17 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~--- 91 (178)
T 3hm2_A 17 AISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV--- 91 (178)
T ss_dssp HHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC---
T ss_pred HHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc---
Confidence 33333445567999999999999999998875 789999999999999999999999887689 8889886544321
Q ss_pred hhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 91 VSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.++||+|++.....+ ..+++.+.+.|+|||.+++...
T Consensus 92 --------~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 92 --------PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp --------CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred --------CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEee
Confidence 378999998876444 7789999999999999998654
No 28
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=1e-15 Score=117.31 Aligned_cols=116 Identities=17% Similarity=0.155 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.++....+...+...++.+|||+|||+|..+..+++. +.+|+++|+++++++.|+++++..++.++++++.+|..+.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3444445555555667789999999999999999986 5799999999999999999999999876999999999775
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
++. ..+||+|+++... ... +++.+.+.|+|||.+++...
T Consensus 117 ~~~------------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 117 LAD------------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp GTT------------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ccc------------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEec
Confidence 432 3579999998743 344 89999999999999998654
No 29
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.70 E-value=3e-16 Score=126.04 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=106.6
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CC--------CCceEEEeCCchhHHH
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV--------AHKIDFREGPALPLLD 85 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~--------~~~v~~~~~d~~~~~~ 85 (192)
...++++|||||||+|..+..+++. + ..+++++|+++.+++.|++++ .. ++ .++++++.+|+.++++
T Consensus 72 ~~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 72 AHPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp HSSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred hCCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc
Confidence 3467899999999999999999987 5 689999999999999999998 44 32 4689999999987765
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCC-----cC--cHHHHHHHHhccCCCeEEEEeCccCCccccCCCCCCchhhhhhHH
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADK-----DN--YVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLR 158 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~-----~~--~~~~~~~~~~~L~~gG~lv~~d~~~~g~~~~~~~~~~~~~~~~~~ 158 (192)
. .++||+|++|... .. ..++++.+.+.|+|||++++.... .. .. ....
T Consensus 149 ~------------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~----~~---~~------~~~~ 203 (281)
T 1mjf_A 149 N------------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS----VY---LF------TDEL 203 (281)
T ss_dssp H------------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE----TT---TS------HHHH
T ss_pred c------------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC----cc---cC------HHHH
Confidence 3 3589999999762 11 478899999999999999986211 00 00 1222
Q ss_pred HHHHHHHHHhhcCCCeeEEEeecCC---eeEEEEEc
Q 029536 159 DFVQELNKALAVDPRIEICQISIAD---GVTLCRRI 191 (192)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~~~---G~~i~~k~ 191 (192)
..+.+..+.+..+..+....+|..+ |+.++.|.
T Consensus 204 ~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 204 ISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 3333444444444445555667654 47788774
No 30
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.68 E-value=3.6e-16 Score=124.38 Aligned_cols=114 Identities=17% Similarity=0.215 Sum_probs=91.9
Q ss_pred HHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 10 FFSMLLKL--INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 10 ~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
++..++.. .++.+|||+|||+|..+..+++.++ ++.+|+++|+++.+++.|++++...+...+++++++|..++
T Consensus 59 ~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~--- 135 (261)
T 4gek_A 59 MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI--- 135 (261)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC---
T ss_pred HHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc---
Confidence 34444442 3557999999999999999998864 46799999999999999999999988888999999998654
Q ss_pred HHhhhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++.... .....+++.+.+.|||||++++.+..
T Consensus 136 -----------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 136 -----------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp -----------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -----------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 14579999887542 23356899999999999999986654
No 31
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=1e-16 Score=125.58 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=92.3
Q ss_pred HHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 10 FFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 10 ~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
++..++.. .++.+|||||||+|.++.++++..+ .++++||++|.+++.|+++....+ .+++++.+|+.+....+
T Consensus 49 ~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~ 124 (236)
T 3orh_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS
T ss_pred HHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccc
Confidence 44444443 4567999999999999999987643 689999999999999999887665 47899999998776544
Q ss_pred HhhhhcccccCCCcccEEEEeCCC--------cCcHHHHHHHHhccCCCeEEEEeCccCCc
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYDNTLWGG 140 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~d~~~~g 140 (192)
..++||.|++|... .+...+++.+.++|||||++++.+....+
T Consensus 125 ----------~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~ 175 (236)
T 3orh_A 125 ----------PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG 175 (236)
T ss_dssp ----------CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH
T ss_pred ----------cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCch
Confidence 26789999998752 22456788899999999999987765443
No 32
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.68 E-value=2.8e-16 Score=117.11 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=89.2
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|+++++..++.++++++.+|..+.++..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~--------- 97 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL--------- 97 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB---------
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh---------
Confidence 346789999999999999999876 3 57999999999999999999999888778999999998765543
Q ss_pred cCCCcccEEEEeCCC--cCcHHHHHHHH--hccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADK--DNYVNYHKRLI--ELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~--~~~~~~~~~~~--~~L~~gG~lv~~d~ 136 (192)
.++||+|+++.+. ....+.++.+. +.|+|||++++...
T Consensus 98 --~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 98 --TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp --CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred --cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 5679999998763 34456677776 89999999988643
No 33
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.68 E-value=4e-16 Score=125.01 Aligned_cols=106 Identities=12% Similarity=0.149 Sum_probs=88.5
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CC-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||+|..++.+++..+ ..+++++|+++.+++.|++++... ++ .++++++.+|+.++++..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------ 145 (275)
T 1iy9_A 73 HPNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------ 145 (275)
T ss_dssp SSSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------
T ss_pred CCCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 35789999999999999999987643 689999999999999999998653 33 468999999998876542
Q ss_pred ccccCCCcccEEEEeCCCcC-------cHHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDADKDN-------YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|..... ..++++.+.+.|+|||++++.
T Consensus 146 -----~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 146 -----ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp -----CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 578999999976321 268999999999999999986
No 34
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.66 E-value=8.9e-16 Score=114.90 Aligned_cols=109 Identities=16% Similarity=0.167 Sum_probs=89.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++++...++.++++++++|..+..+.+...
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------- 113 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE------- 113 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT-------
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc-------
Confidence 36789999999999999998874 3 57999999999999999999999888778999999998876554322
Q ss_pred CCCcccEEEEeCC--CcCcHHHHHHH--HhccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDAD--KDNYVNYHKRL--IELVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~--~~~~~~~~~~~--~~~L~~gG~lv~~d~ 136 (192)
.++||+|+++.+ .......++.+ .+.|+|||++++...
T Consensus 114 -~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 114 -KLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp -TCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -CCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 578999999876 23456677777 788999999987543
No 35
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.66 E-value=2e-15 Score=118.11 Aligned_cols=105 Identities=13% Similarity=0.144 Sum_probs=87.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++...+ +.+|+++|+++++++.|+++++..++. +++++++|..++.... .
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~-~-------- 137 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRK-D-------- 137 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCT-T--------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccc-c--------
Confidence 3678999999999999999998655 789999999999999999999998884 6999999986642100 0
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|++... .++..+++.+.+.|+|||.+++.
T Consensus 138 ~~~~fD~V~~~~~-~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 138 VRESYDIVTARAV-ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TTTCEEEEEEECC-SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccCCccEEEEecc-CCHHHHHHHHHHhcCCCCEEEEE
Confidence 1468999999874 56788999999999999999874
No 36
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=4e-15 Score=111.54 Aligned_cols=102 Identities=11% Similarity=0.132 Sum_probs=83.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..+++. ..+|+++|+++.+++.|+++++..++ +++++++++..... .. .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~-~~----------~ 86 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLD-HY----------V 86 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGG-GT----------C
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHH-hh----------c
Confidence 5689999999999999999976 68999999999999999999999888 78999997765432 11 1
Q ss_pred CCcccEEEEeCC------------CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 99 HGTFDFVFVDAD------------KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 99 ~~~~D~v~id~~------------~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+++||+|+++.. .......++.+.+.|||||.+++..
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 578999998832 1223467788899999999998753
No 37
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.65 E-value=8.5e-16 Score=117.38 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=90.0
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC-CceEEEeCCchhHHHHHH
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFREGPALPLLDQLI 88 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 88 (192)
++..+....++.+|||+|||+|..++.++... ..+|+++|+++++++.|+++++..++. ++++++.+|..+..+.+
T Consensus 44 l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 120 (201)
T 2ift_A 44 LFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP- 120 (201)
T ss_dssp HHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-
T ss_pred HHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh-
Confidence 33333333477899999999999999877652 368999999999999999999998875 68999999987654321
Q ss_pred hhhhcccccCCCc-ccEEEEeCC--CcCcHHHHHHH--HhccCCCeEEEEeCcc
Q 029536 89 QDVSSTKEKYHGT-FDFVFVDAD--KDNYVNYHKRL--IELVKVGGVIGYDNTL 137 (192)
Q Consensus 89 ~~~~~~~~~~~~~-~D~v~id~~--~~~~~~~~~~~--~~~L~~gG~lv~~d~~ 137 (192)
..++ ||+|+++.+ .....+.++.+ .++|+|||++++....
T Consensus 121 ---------~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 121 ---------QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp ---------CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred ---------ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1467 999999987 33456677777 5679999999876443
No 38
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.65 E-value=1e-15 Score=123.82 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=86.0
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC---C-CCceEEEeCCchhHHHHHHhhh
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG---V-AHKIDFREGPALPLLDQLIQDV 91 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~v~~~~~d~~~~~~~~~~~~ 91 (192)
...++++|||||||+|..++.+++..+ ..+|+++|+++.+++.|++++...+ + .++++++.+|+.++++..
T Consensus 80 ~~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---- 154 (294)
T 3adn_A 80 AHGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT---- 154 (294)
T ss_dssp HSTTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC----
T ss_pred cCCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc----
Confidence 345789999999999999999998744 6899999999999999999987652 2 368999999998876532
Q ss_pred hcccccCCCcccEEEEeCCCc-------CcHHHHHHHHhccCCCeEEEEe
Q 029536 92 SSTKEKYHGTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 155 -------~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 155 -------SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -------CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred -------CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 57899999987521 1267999999999999999975
No 39
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=1.2e-15 Score=119.79 Aligned_cols=118 Identities=14% Similarity=0.211 Sum_probs=95.4
Q ss_pred HHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 6 ~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
.....+...+...++.+|||||||+|..+..++... +.+++++|+++.+++.|++++...++.++++++.+|..+..
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~- 99 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV- 99 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-
Confidence 333334444444567899999999999999999876 46899999999999999999999998889999999987641
Q ss_pred HHHhhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
+ .++||+|++... ..+...+++.+.+.|||||.+++.+..+
T Consensus 100 -----------~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 100 -----------A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp -----------C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred -----------c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 1 578999998654 3356889999999999999999876543
No 40
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.65 E-value=1.4e-15 Score=122.97 Aligned_cols=106 Identities=14% Similarity=0.178 Sum_probs=86.8
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHH--cCC-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK--AGV-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++.. .++ .++++++.+|+.++++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 45678999999999999999998754 68999999999999999999865 233 468999999987765432
Q ss_pred ccccCCCcccEEEEeCCCc--------CcHHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDADKD--------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 161 -----~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 161 -----KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp -----SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 57899999987532 3378999999999999999985
No 41
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.65 E-value=1.8e-15 Score=115.57 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=94.8
Q ss_pred HHHHHHHHhHc--CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 8 AQFFSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 8 ~~~l~~l~~~~--~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
..+...++... ++.+|||+|||+|..+..++.. + +.+++++|+++.+++.|++++...+..++++++++|..+..
T Consensus 30 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 106 (219)
T 3dlc_A 30 PIIAENIINRFGITAGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP- 106 (219)
T ss_dssp HHHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-
Confidence 34444444433 3349999999999999999987 4 68999999999999999999999998889999999986531
Q ss_pred HHHhhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
+ ..++||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 107 -~----------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 107 -I----------EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -S----------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -C----------CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 1 2578999999865 3456789999999999999999876543
No 42
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.64 E-value=5.4e-15 Score=108.97 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=86.5
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..++...+ +++++|+++.+++.|++++...++ +++++++|..+.++.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------- 107 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ-------- 107 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT--------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc--------
Confidence 778999999999999999998743 499999999999999999998877 8999999998866554322
Q ss_pred CCcccEEEEeCCC-cCcHHHHHHHH--hccCCCeEEEEeCc
Q 029536 99 HGTFDFVFVDADK-DNYVNYHKRLI--ELVKVGGVIGYDNT 136 (192)
Q Consensus 99 ~~~~D~v~id~~~-~~~~~~~~~~~--~~L~~gG~lv~~d~ 136 (192)
.++||+|+++... ....+.++.+. +.|+|||++++...
T Consensus 108 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 108 GERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred CCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 3589999998653 44566777777 99999999987543
No 43
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.64 E-value=4.6e-15 Score=110.93 Aligned_cols=117 Identities=18% Similarity=0.178 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
.+....+...+...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+..++++++.+|..+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 95 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL 95 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc
Confidence 4444555555566677899999999999999998764 7999999999999999999999888778999999986633
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+. .++||+|+++....+...+++.+.+.|+|||.+++...
T Consensus 96 ~~------------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 96 CK------------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp TT------------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cc------------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 21 25899999987767788999999999999999988643
No 44
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.64 E-value=2.6e-15 Score=114.81 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=86.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..++.++... ..+|+++|+++.+++.|+++++..++ ++++++++|..+.++..
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~---------- 119 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK---------- 119 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC----------
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc----------
Confidence 477899999999999999877653 35899999999999999999999888 78999999987765321
Q ss_pred CCCcccEEEEeCC--CcCcHHHHHHHHh--ccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDAD--KDNYVNYHKRLIE--LVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~--~~~~~~~~~~~~~--~L~~gG~lv~~d~ 136 (192)
.++||+|+++.+ .......++.+.+ .|+|||++++...
T Consensus 120 -~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 120 -GTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp -CCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -CCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 568999999977 3445667777755 5999999987543
No 45
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.64 E-value=9.9e-16 Score=121.28 Aligned_cols=114 Identities=14% Similarity=0.134 Sum_probs=94.6
Q ss_pred HHHHHHHHhHc-CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 8 AQFFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 8 ~~~l~~l~~~~-~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
+.+|..++... ++.+|||+|||+|..++.++...+ .+++++|+++.+++.|++++...++.++++++++|..+..+.
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 45666666666 788999999999999999998753 499999999999999999999999988999999999876433
Q ss_pred HHhhhhcccccCCCcccEEEEeCCC-----------------------cCcHHHHHHHHhccCCCeEEEE
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADK-----------------------DNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~-----------------------~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
+ ..++||+|+++++. ..+..+++.+.++|+|||.+++
T Consensus 115 ~----------~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 115 I----------PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp S----------CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred h----------ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 2 25789999997652 1134688899999999999987
No 46
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.63 E-value=4.5e-15 Score=115.01 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=87.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+...|||||||+|.++..+|...| +..++++|+++.+++.|++++...++ .+++++.+|+.+.++... .
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~---------~ 102 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMI---------P 102 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHS---------C
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHc---------C
Confidence 457899999999999999999876 78999999999999999999998887 479999999988766421 2
Q ss_pred CCcccEEEEeCC---C--cC------cHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDAD---K--DN------YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~---~--~~------~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||.|++..+ . .+ ...+++.+.+.|||||++++.
T Consensus 103 ~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 103 DNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp TTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 679999998632 1 11 135899999999999998763
No 47
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.63 E-value=1.8e-15 Score=118.90 Aligned_cols=108 Identities=20% Similarity=0.260 Sum_probs=91.7
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..++.+|||+|||+|..+..++...+ ++++++|+++.+++.+++++...++.++++++.+|..+. + +
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~--------- 110 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P-F--------- 110 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S-S---------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C-C---------
Confidence 34567999999999999999999875 499999999999999999999999988899999998553 1 1
Q ss_pred cCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 97 KYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 97 ~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++... ..+...+++.+.+.|+|||++++.+..+
T Consensus 111 -~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 111 -QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp -CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred -CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 2579999998865 2247789999999999999999987543
No 48
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.63 E-value=5.4e-15 Score=119.29 Aligned_cols=118 Identities=10% Similarity=0.129 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 5 PDEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 5 ~~~~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
..+.+.+..++.. .++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...++.++++++.+|..
T Consensus 55 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 132 (302)
T 3hem_A 55 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH
Confidence 3444555556554 3456999999999999999998764 7899999999999999999999999889999999986
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCC------------cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
++ .++||+|++.... ..+..+++.+.+.|||||.+++.+....
T Consensus 133 ~~---------------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 133 EF---------------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp GC---------------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred Hc---------------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 54 4689999987542 2337899999999999999999776543
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.63 E-value=1.5e-15 Score=114.91 Aligned_cols=107 Identities=10% Similarity=0.168 Sum_probs=89.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.+..+|||+|||+|..+..+++.+.+.++++++|+++.+++.|++++...++.++++++++|..+....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----------- 89 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY----------- 89 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT-----------
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh-----------
Confidence 456799999999999999999886446799999999999999999999998878999999998665322
Q ss_pred CCCcccEEEEeCCC------------cCcHHHHHHHHhccCCCeEEEEeC
Q 029536 98 YHGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 98 ~~~~~D~v~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|+++... ..+..+++.+.+.|+|||.+++..
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 15789999988632 123578999999999999998764
No 50
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=2.3e-15 Score=122.55 Aligned_cols=107 Identities=12% Similarity=0.070 Sum_probs=88.3
Q ss_pred HcCCC--EEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 17 LINAK--NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~--~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
..+++ +|||||||+|..+.++++..+ +.++++||+++.+++.|++++... ..++++++.+|+.+++....
T Consensus 85 ~p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~------ 156 (317)
T 3gjy_A 85 HQDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFT------ 156 (317)
T ss_dssp HSCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCC------
T ss_pred CCCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhcc------
Confidence 34555 999999999999999999777 679999999999999999988543 24689999999988876431
Q ss_pred cccCCCcccEEEEeCCCc-------CcHHHHHHHHhccCCCeEEEEeC
Q 029536 95 KEKYHGTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.++||+|++|.... ...++++.+.+.|+|||++++.-
T Consensus 157 ----~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 157 ----PASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp ----TTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 47899999986421 13789999999999999998754
No 51
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=1.6e-15 Score=119.31 Aligned_cols=116 Identities=16% Similarity=0.199 Sum_probs=96.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.+.....+...+...++.+|||+|||+|..+..++..+.+..+++++|+++++++.|+++++..++.++++++.+|..+.
T Consensus 78 ~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred cHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 44555566666666778899999999999999999884447899999999999999999999999977799999998754
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+ ..++||+|+++.. ....+++.+.+.|+|||.+++.
T Consensus 158 ~-------------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 158 I-------------EEENVDHVILDLP--QPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp C-------------CCCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEE
T ss_pred c-------------CCCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEE
Confidence 2 1568999999764 3456789999999999999875
No 52
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.62 E-value=9.9e-15 Score=116.66 Aligned_cols=119 Identities=18% Similarity=0.189 Sum_probs=96.3
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.+....+.
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLL 151 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhh
Confidence 34555555567789999999999999999988764489999999999999999999999884 89999999977654332
Q ss_pred hhhhcccccCCCcccEEEEeCCC---------------------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDADK---------------------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.. .++||+|++|++. .....+++.+.+.|||||.+++...
T Consensus 152 ~~--------~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 152 KN--------EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HT--------TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hc--------cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 11 5689999999552 2346788999999999999998654
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=1.7e-15 Score=120.04 Aligned_cols=108 Identities=16% Similarity=0.217 Sum_probs=91.8
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..++.+|||||||+|..+..++.. + ..+++++|+++.+++.+++++...++.++++++.+|..+.. +
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~--------- 110 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F--------- 110 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C---------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C---------
Confidence 345789999999999999999987 4 67999999999999999999999999889999999986531 1
Q ss_pred cCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 97 KYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 97 ~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++... .-+...+++.+.+.|+|||++++.+..+
T Consensus 111 -~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 111 -RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp -CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred -CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 2578999998765 2256788999999999999999987653
No 54
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.62 E-value=1e-14 Score=111.06 Aligned_cols=114 Identities=14% Similarity=0.185 Sum_probs=92.7
Q ss_pred HHHHHHHHHhH-cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 7 EAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 7 ~~~~l~~l~~~-~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
...++..+... .++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...+... ++++.+|..+..
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-
Confidence 34445555443 35689999999999999998874 3 5799999999999999999999988854 999999986531
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.++||+|+++........+++.+.+.|+|||.+++.+..
T Consensus 123 -------------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 123 -------------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp -------------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred -------------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 578999999887666677888889999999999986543
No 55
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.62 E-value=8.4e-15 Score=112.86 Aligned_cols=104 Identities=17% Similarity=0.284 Sum_probs=86.8
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||||||+|..+..++...| +.+++++|+++.+++.|++++...++ ++++++.+|+.++...+ .
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~----------~ 105 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVF----------E 105 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHC----------C
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc----------C
Confidence 467899999999999999999876 78999999999999999999998887 57999999998743323 2
Q ss_pred CCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||.|++..... .+..+++.+.+.|+|||.+++.
T Consensus 106 ~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 106 PGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp TTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred cCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 56899998864311 1468899999999999999864
No 56
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.62 E-value=4.8e-15 Score=113.90 Aligned_cols=104 Identities=19% Similarity=0.275 Sum_probs=87.6
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||||||+|..+..++...| +.+++++|+++.+++.|++++...++ ++++++.+|..++...+ .
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~----------~ 108 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYF----------E 108 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTS----------C
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc----------C
Confidence 467999999999999999999887 78999999999999999999999888 68999999987632212 2
Q ss_pred CCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|+++.+.. .+..+++.+.+.|+|||++++.
T Consensus 109 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 109 DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 56899999986521 2367999999999999999873
No 57
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.61 E-value=4.4e-14 Score=115.97 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=89.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC-ceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++.+|||+|||+|..++.++.. +.+|+++|+++.+++.|+++++..++.+ +++++++|+.++++.....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~------ 222 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR------ 222 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH------
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc------
Confidence 35679999999999999999975 3499999999999999999999998865 5999999998877654322
Q ss_pred cCCCcccEEEEeCCC-------------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADK-------------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~-------------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.++||+|++|++. ..+..+++.+.++|+|||++++...
T Consensus 223 --~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 223 --GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp --TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred --CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 5689999998762 1256788888999999999776543
No 58
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.61 E-value=4.8e-15 Score=121.20 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=88.4
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CC-CCceEEEeCCchhHHHHHHhhhh
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDVS 92 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~ 92 (192)
...++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... ++ .++++++.+|+.++++..
T Consensus 113 ~~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~----- 186 (321)
T 2pt6_A 113 VSKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV----- 186 (321)
T ss_dssp HSSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-----
T ss_pred cCCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-----
Confidence 345788999999999999999997654 689999999999999999998652 23 468999999998776542
Q ss_pred cccccCCCcccEEEEeCCC-----cC-c-HHHHHHHHhccCCCeEEEEe
Q 029536 93 STKEKYHGTFDFVFVDADK-----DN-Y-VNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~-----~~-~-~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|... .. + .++++.+.+.|+|||++++.
T Consensus 187 ------~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 187 ------TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp ------CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5789999999741 11 2 78999999999999999985
No 59
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.60 E-value=5.5e-14 Score=111.15 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhH-cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 6 DEAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 6 ~~~~~l~~l~~~-~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
.....+..+... .++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++. +++..+|..+.+
T Consensus 106 tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~ 180 (254)
T 2nxc_A 106 TTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAAL 180 (254)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHG
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcC
Confidence 344455555444 45689999999999999998875 239999999999999999999988874 899999886642
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+ .++||+|+++........+++.+.+.|+|||.+++.+..
T Consensus 181 ~-------------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 181 P-------------FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp G-------------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred c-------------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 1 468999999876666678899999999999999986554
No 60
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.1e-15 Score=119.71 Aligned_cols=119 Identities=13% Similarity=0.162 Sum_probs=94.1
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHH---cCCCCceEEEeCCchhHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK---AGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~ 85 (192)
.+|..++...++.+|||+|||+|..++.++...+ ..+++++|+++.+++.|++++.. .++.++++++++|..+..+
T Consensus 26 ~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 26 MLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred HHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 3455555555677999999999999999999876 68999999999999999999988 8887789999999987654
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCC---------------------cCcHHHHHHHHhccCCCeEEEE
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADK---------------------DNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~---------------------~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
..... ....++||+|+++++. ..+..+++.+.++|+|||.+++
T Consensus 105 ~~~~~-----~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 105 ARVEA-----GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHHT-----TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhh-----ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 22100 1125689999998541 1256788899999999999886
No 61
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.60 E-value=8.2e-15 Score=117.00 Aligned_cols=116 Identities=18% Similarity=0.214 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 4 SPDEAQFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 4 ~~~~~~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
.++...++..++.. .++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++. +++++++|..
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 45667777777766 3567999999999999999998876 789999999999999999999998874 7999999986
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCC----------------------------cCcHHHHHHHHhccCCCeEEEE
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADK----------------------------DNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~----------------------------~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
+.++ .++||+|+++.+. ..+..+++.+.+.|+|||++++
T Consensus 170 ~~~~-------------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~ 236 (276)
T 2b3t_A 170 SALA-------------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL 236 (276)
T ss_dssp GGGT-------------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hhcc-------------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 6421 4689999998541 2346678888999999999998
Q ss_pred e
Q 029536 134 D 134 (192)
Q Consensus 134 ~ 134 (192)
.
T Consensus 237 ~ 237 (276)
T 2b3t_A 237 E 237 (276)
T ss_dssp E
T ss_pred E
Confidence 5
No 62
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.60 E-value=1.9e-15 Score=115.10 Aligned_cols=119 Identities=13% Similarity=0.195 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHHhH----cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCC
Q 029536 4 SPDEAQFFSMLLKL----INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP 79 (192)
Q Consensus 4 ~~~~~~~l~~l~~~----~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 79 (192)
.++...++..++.. .++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+. +++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcc
Confidence 45666777777665 4677999999999999999999876 68999999999999999999988776 78899998
Q ss_pred chhHHHHHHhhhhcccccCCCcccEEEEeCCCcC-----------------------------cHHHHHHHHhccCCCeE
Q 029536 80 ALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN-----------------------------YVNYHKRLIELVKVGGV 130 (192)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~-----------------------------~~~~~~~~~~~L~~gG~ 130 (192)
..+.++..... .++||+|+++.+... +..+++.+.+.|+|||+
T Consensus 88 ~~~~~~~~~~~--------~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 159 (215)
T 4dzr_A 88 GIEWLIERAER--------GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRA 159 (215)
T ss_dssp HHHHHHHHHHT--------TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSE
T ss_pred hHhhhhhhhhc--------cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCe
Confidence 87754432111 479999999754100 15667778899999999
Q ss_pred -EEE
Q 029536 131 -IGY 133 (192)
Q Consensus 131 -lv~ 133 (192)
+++
T Consensus 160 l~~~ 163 (215)
T 4dzr_A 160 GVFL 163 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 554
No 63
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.60 E-value=7.6e-15 Score=117.97 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=88.0
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC--C-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG--V-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||.|..+..+++..+ ..+++++|+++.+++.+++++...+ + .++++++.+|+.++++..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 148 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------
Confidence 45788999999999999999997644 6899999999999999999886542 2 468999999998876543
Q ss_pred ccccCCCcccEEEEeCCC-----cC-c-HHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDADK-----DN-Y-VNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~-----~~-~-~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|... .. + .++++.+.+.|+|||++++.
T Consensus 149 -----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 149 -----TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp -----CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5789999998741 11 1 68999999999999999976
No 64
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=6.5e-15 Score=112.53 Aligned_cols=112 Identities=18% Similarity=0.233 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.+.....+...+...++.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++...+.. +++++.+|..+.
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 3444555555556667889999999999999999987 579999999999999999999998884 799999998764
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
... .++||+|+++....+.. +.+.+.|+|||.+++.
T Consensus 138 ~~~------------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 138 WQA------------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CGG------------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred Ccc------------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 321 57899999987644433 2577899999988874
No 65
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.59 E-value=3.3e-14 Score=121.31 Aligned_cols=118 Identities=19% Similarity=0.252 Sum_probs=97.4
Q ss_pred HHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 7 ~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
...++..++...++.+|||+|||+|..+..+|..++..++|+++|+++.+++.+++++++.|+. ++++++|+.++...
T Consensus 89 ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 89 SAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEA 166 (464)
T ss_dssp TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHH
T ss_pred HHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhh
Confidence 3455666666677889999999999999999998875689999999999999999999999985 99999999776433
Q ss_pred HHhhhhcccccCCCcccEEEEeCCCc---------C----------------cHHHHHHHHhccCCCeEEEEeCcc
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADKD---------N----------------YVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
. .++||+|++|++.. + ..++++.+.+.|||||.|++..+.
T Consensus 167 ~-----------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 167 F-----------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp H-----------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred c-----------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 3 67899999997621 1 156888899999999999976543
No 66
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.59 E-value=2.4e-14 Score=113.50 Aligned_cols=119 Identities=15% Similarity=0.299 Sum_probs=97.1
Q ss_pred HHHHHHHHHHhHc---CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh
Q 029536 6 DEAQFFSMLLKLI---NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (192)
Q Consensus 6 ~~~~~l~~l~~~~---~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 82 (192)
.+.+++..++... ++.+|||||||+|..+..+++.. +.+++++|+++.+++.+++++...++.++++++.+|..+
T Consensus 45 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 122 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD 122 (273)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc
Confidence 4455566665543 56799999999999999999875 579999999999999999999999988899999999865
Q ss_pred HHHHHHhhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 83 LLDQLIQDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
. + + ..++||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 123 ~-~-~----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 123 L-P-F----------EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp C-C-S----------CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred C-C-C----------CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 3 1 1 2578999998765 3356789999999999999999877654
No 67
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.59 E-value=2.6e-14 Score=114.91 Aligned_cols=115 Identities=17% Similarity=0.306 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 4 SPDEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 4 ~~~~~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
.++...++..++.. .++.+|||+|||+|..++.++.. + ..+++++|+++.+++.|++++...++.++++++++|.
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc
Confidence 34556666665543 35679999999999999999988 5 7899999999999999999999999977899999998
Q ss_pred hhHHHHHHhhhhcccccCCCcc---cEEEEeCCCcC----------------------cHHHHHHHH-hccCCCeEEEEe
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTF---DFVFVDADKDN----------------------YVNYHKRLI-ELVKVGGVIGYD 134 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---D~v~id~~~~~----------------------~~~~~~~~~-~~L~~gG~lv~~ 134 (192)
.+.+ .++| |+|+.+++... -..+++.+. +.|+|||++++.
T Consensus 183 ~~~~--------------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 183 LEPF--------------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TGGG--------------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hhhc--------------ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 7642 2367 99999855211 126889999 999999999974
No 68
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.58 E-value=7.9e-15 Score=115.82 Aligned_cols=103 Identities=16% Similarity=0.172 Sum_probs=86.9
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||||||+|..++.++...+ +.+|+++|+++++++.|+++++..++. +++++++|+.++.... ..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~---------~~ 148 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREA---------GH 148 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTST---------TT
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhccc---------cc
Confidence 467999999999999999998876 789999999999999999999999985 5999999987653210 01
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.++||+|++.+. .+...+++.+.++|+|||.+++
T Consensus 149 ~~~fD~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 149 REAYARAVARAV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TTCEEEEEEESS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCceEEEECCc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 478999999764 3467889999999999998876
No 69
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.58 E-value=3e-14 Score=113.17 Aligned_cols=109 Identities=25% Similarity=0.312 Sum_probs=91.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..++...| +.+++++|+++.+++.+++++...+. ++++++.+|..+.. +
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~--~---------- 101 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLP--F---------- 101 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCC--S----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCC--C----------
Confidence 4678999999999999999999876 68999999999999999999998887 47999999987541 1
Q ss_pred CCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccCCc
Q 029536 98 YHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWGG 140 (192)
Q Consensus 98 ~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~~g 140 (192)
..++||+|++... ..+...+++.+.+.|+|||++++.+..+..
T Consensus 102 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 147 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGS 147 (276)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGG
T ss_pred CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCC
Confidence 2679999998865 345578999999999999999987655433
No 70
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.58 E-value=2.2e-14 Score=120.01 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=90.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC-ceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++++|||+|||+|..++.+|... ..+|+++|+++.+++.|++|++..++.+ +++++++|+.++++.+..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~------ 282 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH------ 282 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT------
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh------
Confidence 567899999999999999999752 3589999999999999999999999866 8999999999887765432
Q ss_pred cCCCcccEEEEeCCCc------------CcHHHHHHHHhccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADKD------------NYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+||+|++|++.- .+.+++..+.+.|+|||++++...
T Consensus 283 --~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 283 --HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp --TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred --CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 46899999997631 234466777899999999987643
No 71
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=4.6e-15 Score=118.84 Aligned_cols=109 Identities=18% Similarity=0.226 Sum_probs=91.4
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
+....++.+|||||||+|..+..++..++.+.+++++|+++.+++.|++++...+. +++++.+|..+..
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~--------- 85 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIE--------- 85 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCC---------
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcC---------
Confidence 33455788999999999999999999887568999999999999999999887654 8999999987531
Q ss_pred ccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 94 TKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++... ..+...+++.+.+.|+|||++++.+..
T Consensus 86 ----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 ----LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----cCCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 1468999999875 345678999999999999999987655
No 72
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.58 E-value=5e-14 Score=108.05 Aligned_cols=111 Identities=16% Similarity=0.251 Sum_probs=92.5
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...++.+|||+|||+|..+..++...++..+++++|+++.+++.+++++...++. +++++.+|..+.. +
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-------- 102 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L-------- 102 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S--------
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C--------
Confidence 4456779999999999999999988644689999999999999999999988874 8999999986541 1
Q ss_pred ccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 96 EKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 96 ~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 103 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 103 --PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp --CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred --CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 2678999998865 33567899999999999999998765543
No 73
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.58 E-value=2.4e-14 Score=120.06 Aligned_cols=112 Identities=16% Similarity=0.261 Sum_probs=94.6
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC-CCceEEEeCCchhHHHHHHhhhh
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV-AHKIDFREGPALPLLDQLIQDVS 92 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~ 92 (192)
+....++++|||+|||+|..++.++... ..+|+++|+++.+++.|+++++..++ .++++++.+|+.++++.+..+
T Consensus 215 l~~~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~-- 290 (396)
T 3c0k_A 215 TRRYVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR-- 290 (396)
T ss_dssp HHHHCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT--
T ss_pred HHHhhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc--
Confidence 3344678899999999999999999862 46899999999999999999999988 668999999998887765432
Q ss_pred cccccCCCcccEEEEeCCC------------cCcHHHHHHHHhccCCCeEEEEeC
Q 029536 93 STKEKYHGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..+||+|++|++. ..+.+++..+.+.|+|||++++..
T Consensus 291 ------~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 291 ------GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp ------TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4689999999863 456788899999999999998754
No 74
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.58 E-value=1.6e-14 Score=115.39 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=88.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||||||+|..+..++.. +.+++++|+++.+++.|++++...++.++++++.+|..+..+ + .
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~----------~ 133 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS-H----------L 133 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG-G----------C
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh-h----------c
Confidence 3569999999999999999986 579999999999999999999998887899999999876532 2 2
Q ss_pred CCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 99 HGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 99 ~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.++||+|++... ..+...+++.+.+.|+|||++++...
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 689999999865 34567899999999999999998654
No 75
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=5.4e-14 Score=104.40 Aligned_cols=112 Identities=16% Similarity=0.085 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+.....+...+...++.+|||+|||+|..+..++. + ..+++++|+++.+++.+++++...++ ++++++.+|..+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~ 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVL 96 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccc
Confidence 34444455555556778999999999999999997 3 78999999999999999999999887 68999999987622
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+ .++||+|+++.. .....+++.+.+. |||.+++...
T Consensus 97 ~-------------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 97 D-------------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp G-------------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred c-------------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 1 468999999887 6778888888877 9999988653
No 76
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=3.2e-14 Score=113.69 Aligned_cols=117 Identities=9% Similarity=0.081 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 5 PDEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 5 ~~~~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
..+.+.+..++.. .++.+|||||||+|..+..+++..+ .+++++|+++.+++.+++++...++.++++++.+|..
T Consensus 47 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 124 (287)
T 1kpg_A 47 EAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE 124 (287)
T ss_dssp HHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh
Confidence 3445566666654 3457999999999999999996653 5999999999999999999998888889999999985
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
++ +++||+|++... ..+...+++.+.+.|||||.+++.+...
T Consensus 125 ~~---------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 125 QF---------------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp GC---------------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred hC---------------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 43 368999998754 2456889999999999999999877654
No 77
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.58 E-value=5.4e-15 Score=115.27 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=87.6
Q ss_pred HHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 9 ~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
.++..++.. .++.+|||||||+|..+..++... ..+++++|+++.+++.|+++....+ .+++++.+|..+..+.
T Consensus 48 ~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG
T ss_pred HHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcc
Confidence 344444443 356799999999999999997642 3589999999999999999887665 5899999999776433
Q ss_pred HHhhhhcccccCCCcccEEEEeCCC--------cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+ .+++||+|++|... .....+++.+.+.|||||++++.+..
T Consensus 124 ~----------~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 124 L----------PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp S----------CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c----------CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 3 25789999994321 11235688899999999999987654
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.57 E-value=5.2e-14 Score=105.32 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=88.3
Q ss_pred HHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC-ceEEEeCCchhHHHHHHhhh
Q 029536 13 MLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLIQDV 91 (192)
Q Consensus 13 ~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~ 91 (192)
..+...++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++...++.. +++++.+|..+..+
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~------ 116 (194)
T 1dus_A 46 ENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK------ 116 (194)
T ss_dssp HHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT------
T ss_pred HHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc------
Confidence 3334446789999999999999999876 5799999999999999999999888754 59999999866422
Q ss_pred hcccccCCCcccEEEEeCCC----cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 92 SSTKEKYHGTFDFVFVDADK----DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~~----~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.++||+|+++... .....+++.+.+.|+|||.+++...
T Consensus 117 -------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 117 -------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp -------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 5689999998763 2346788899999999999987644
No 79
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=7.4e-15 Score=117.33 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=93.6
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
+.+..+....+..+|||+|||+|..++.++...+ .++|+++|+++.+++.|+++++..++ .+++++.+|+.+. +.
T Consensus 109 e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~~~~d~~~~-~~-- 183 (272)
T 3a27_A 109 ERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKL-NNVIPILADNRDV-EL-- 183 (272)
T ss_dssp HHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTC-SSEEEEESCGGGC-CC--
T ss_pred HHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEECChHHc-Cc--
Confidence 3334444455678999999999999999998865 67999999999999999999999888 4788999999776 31
Q ss_pred hhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.++||+|++|.+. ...+++..+.+.|+|||++++....
T Consensus 184 ----------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 184 ----------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ----------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 4689999999875 6677889999999999999876543
No 80
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.57 E-value=1.5e-14 Score=110.15 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++. +++++.+|..+..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------------- 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPS------------- 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCC-------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCc-------------
Confidence 478999999999999999998876 789999999999999999999998875 49999999876421
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++.. ..++..+++.+.+.|+|||++++.
T Consensus 130 ~~~~D~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 130 EPPFDGVISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CSCEEEEECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred cCCcCEEEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 46899999754 456788999999999999999875
No 81
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=3.5e-14 Score=110.80 Aligned_cols=118 Identities=18% Similarity=0.232 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
++.....+...+...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...++ ++++++.+|..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESL 81 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccC
Confidence 34455556666677788999999999999999998764 4899999999999999999988887 4799999998653
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+ + ..++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 82 -~-~----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 82 -P-F----------PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp -C-S----------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -C-C----------CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 1 1 2578999998865 345678899999999999999986554
No 82
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.57 E-value=5.8e-14 Score=117.13 Aligned_cols=149 Identities=21% Similarity=0.249 Sum_probs=102.8
Q ss_pred CCCEEEEEccc------hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhh
Q 029536 19 NAKNTMEIGVF------TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQD 90 (192)
Q Consensus 19 ~~~~ileiG~g------~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~ 90 (192)
++.+||||||| +|+.++.+++...++++|+++|+++.+. . ..++++++++|..+ +...+...
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~-~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------V-DELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------G-CBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------h-cCCCcEEEEecccccchhhhhhcc
Confidence 67899999999 6777777776532378999999999972 1 23689999999865 33333222
Q ss_pred hhcccccCCCcccEEEEeCCC--cCcHHHHHHHHhccCCCeEEEEeCccC------CccccCCCCCCchhhhhhHHHHHH
Q 029536 91 VSSTKEKYHGTFDFVFVDADK--DNYVNYHKRLIELVKVGGVIGYDNTLW------GGSVVAPPDADLDEHFLYLRDFVQ 162 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~~~~L~~gG~lv~~d~~~------~g~~~~~~~~~~~~~~~~~~~~~~ 162 (192)
.++||+|+.+... .++...|+.+.+.|||||++++.|+.. .|..... ...+.+.+.++
T Consensus 286 --------d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~------~~~~tii~~lk 351 (419)
T 3sso_A 286 --------YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQ------ECSGTSLGLLK 351 (419)
T ss_dssp --------HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTT------CCTTSHHHHHH
T ss_pred --------cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCC------cchhHHHHHHH
Confidence 4789999998763 345778999999999999999999872 2221111 11235667777
Q ss_pred HHHHHhhcC---------CCee---EEEeecCCeeEEEEEc
Q 029536 163 ELNKALAVD---------PRIE---ICQISIADGVTLCRRI 191 (192)
Q Consensus 163 ~~~~~~~~~---------~~~~---~~~~p~~~G~~i~~k~ 191 (192)
++.+.+... |.+. ..-+.+=+++.+..|.
T Consensus 352 ~l~D~l~~~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 352 SLIDAIQHQELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp HHHHHHTGGGSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred HHHHHhcccccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 776666532 1221 4446677888887774
No 83
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.57 E-value=2.6e-14 Score=121.71 Aligned_cols=119 Identities=16% Similarity=0.168 Sum_probs=97.6
Q ss_pred HHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 7 ~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
...++..++...++.+|||+|||+|..+..+|..++..++|+++|+++.+++.+++++++.++. ++.+.++|+.++.+.
T Consensus 93 ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 93 SAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPH 171 (456)
T ss_dssp TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhh
Confidence 3456666666677889999999999999999988765689999999999999999999999984 799999999776543
Q ss_pred HHhhhhcccccCCCcccEEEEeCCCc-------------------------CcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADKD-------------------------NYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~~-------------------------~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
. .++||.|++|++.. ...++++.+.++|||||.|++..+.
T Consensus 172 ~-----------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 172 F-----------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp H-----------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred c-----------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 3 57899999998611 0126788889999999999976543
No 84
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=3.8e-14 Score=114.16 Aligned_cols=118 Identities=12% Similarity=0.182 Sum_probs=90.8
Q ss_pred HHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc-CCCCceEEEeCCchhHHHH
Q 029536 10 FFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-GVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 10 ~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~ 86 (192)
++..+... .++.+|||+|||+|..+..++..++...+++++|+++.+++.|++++... +...+++++++|..+..
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~-- 102 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK-- 102 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG--
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC--
Confidence 34444443 36789999999999999999987644789999999999999999999887 55679999999987642
Q ss_pred HHhhhhcccccCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEE
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
+.. ......++||+|++... .-+...+++.+.+.|+|||.+++
T Consensus 103 ~~~----~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 103 FLG----ADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGC----TTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ccc----cccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 110 00000279999998765 22678899999999999999987
No 85
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.57 E-value=1.1e-14 Score=113.21 Aligned_cols=113 Identities=8% Similarity=0.115 Sum_probs=91.8
Q ss_pred HHHHHhHcC-CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 11 FSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 11 l~~l~~~~~-~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
|+.++...+ +.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.++++++.+|..+.++.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--- 81 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--- 81 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---
Confidence 556666554 45899999999999999998755 6899999999999999999999999988999999998654321
Q ss_pred hhhcccccCCCcccEEEEeCC-CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~-~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+||+|++.+. .....++++.+.+.|+++|.+++.-.
T Consensus 82 ---------~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 ---------TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ---------GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ---------CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 226999987543 23357888889999999999997533
No 86
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.57 E-value=3.4e-14 Score=111.99 Aligned_cols=106 Identities=17% Similarity=0.250 Sum_probs=87.4
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...++.+|||+|||+|..+..++... .+++++|+++.+++.|++++...+. ++++++.+|..+. + +
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l-~-~-------- 99 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQM-P-F-------- 99 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CC-C-S--------
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhC-C-C--------
Confidence 44567899999999999999998774 4899999999999999999988877 4799999998653 1 1
Q ss_pred ccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 96 EKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 96 ~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.+++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 100 --~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 100 --TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 2579999998865 345678999999999999999886543
No 87
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.56 E-value=2e-14 Score=117.18 Aligned_cols=118 Identities=18% Similarity=0.275 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 6 ~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.++..
T Consensus 105 ~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE 183 (315)
T ss_dssp HHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc
Confidence 34555566666667789999999999999999998765689999999999999999999999884 79999999876532
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCCcC-------------------------cHHHHHHHHhccCCCeEEEEeCc
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADKDN-------------------------YVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
. .++||+|++|++... ...+++.+.+.|||||.+++..+
T Consensus 184 -~-----------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 184 -L-----------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp -G-----------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred -c-----------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 1 568999999865110 14788889999999999998654
No 88
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.56 E-value=1.3e-14 Score=112.30 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=84.3
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..++.+|||+||| +|..+..++... ..+++++|+++.+++.|++++...+. +++++.+|..... .+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~-~~-------- 119 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIK-GV-------- 119 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSST-TT--------
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhh-hc--------
Confidence 3467899999999 999999999875 57999999999999999999999887 8999999964321 11
Q ss_pred ccCCCcccEEEEeCCCc----------------------CcHHHHHHHHhccCCCeEEEEe
Q 029536 96 EKYHGTFDFVFVDADKD----------------------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~----------------------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+++.+.. .+..+++.+.+.|+|||.+++.
T Consensus 120 --~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 120 --VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp --CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred --ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 157899999986521 1367889999999999998873
No 89
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.56 E-value=4.8e-14 Score=116.28 Aligned_cols=107 Identities=13% Similarity=0.171 Sum_probs=86.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC---CC----CceEEEeCCchhHHHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG---VA----HKIDFREGPALPLLDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~----~~v~~~~~d~~~~~~~~~~~ 90 (192)
.+|++||+||||.|..++.+++.. ..++++||+++.+++.|++++...+ +. ++++++.+|+.++++.....
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 368899999999999999998874 3799999999999999999986432 22 27999999999998765322
Q ss_pred hhcccccCCCcccEEEEeCCC-c--------CcHHHHHHH----HhccCCCeEEEEe
Q 029536 91 VSSTKEKYHGTFDFVFVDADK-D--------NYVNYHKRL----IELVKVGGVIGYD 134 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~-~--------~~~~~~~~~----~~~L~~gG~lv~~ 134 (192)
.++||+|++|+.. . ...++++.+ .+.|+|||++++.
T Consensus 265 --------~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 265 --------GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp --------TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred --------CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 6789999999753 1 225677776 8999999999975
No 90
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.56 E-value=3.5e-14 Score=113.99 Aligned_cols=107 Identities=15% Similarity=0.233 Sum_probs=90.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..++... +.+++++|+++.+++.+++++...++.++++++.+|..+. + +
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~---------- 146 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C---------- 146 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C----------
Confidence 456899999999999999999875 3699999999999999999999999888999999998653 1 1
Q ss_pred CCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
.+++||+|++... ..+...+++.+.+.|||||.+++.+...
T Consensus 147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 2578999998765 3346789999999999999999876543
No 91
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.56 E-value=2.6e-14 Score=119.78 Aligned_cols=111 Identities=22% Similarity=0.353 Sum_probs=93.2
Q ss_pred hHc-CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 16 KLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 16 ~~~-~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
... ++++|||+|||+|..++.++.. + ..+|+++|+++.+++.|+++++..++.++++++.+|+.+.++.+...
T Consensus 213 ~~~~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~---- 286 (396)
T 2as0_A 213 KWVQPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK---- 286 (396)
T ss_dssp GGCCTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT----
T ss_pred HHhhCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh----
Confidence 344 6789999999999999999976 2 46999999999999999999999988668999999998887665432
Q ss_pred cccCCCcccEEEEeCCC------------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+||+|++|++. ..+.+++..+.+.|+|||++++...
T Consensus 287 ----~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 287 ----GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp ----TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred ----CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 5689999999874 3456788889999999998876543
No 92
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.56 E-value=5.5e-14 Score=114.07 Aligned_cols=116 Identities=11% Similarity=0.149 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh
Q 029536 6 DEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (192)
Q Consensus 6 ~~~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 82 (192)
.+.+.+..++.. .++.+|||||||+|..+..+++.. +.+|+++|+++.+++.+++++...++.++++++.+|..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 151 (318)
T 2fk8_A 74 AQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED 151 (318)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG
T ss_pred HHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH
Confidence 445556666554 346799999999999999999875 469999999999999999999998888889999999855
Q ss_pred HHHHHHhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 83 LLDQLIQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
. +++||+|++... ......+++.+.+.|+|||.+++.+...
T Consensus 152 ~---------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 152 F---------------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp C---------------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred C---------------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3 468999998754 2456889999999999999999877654
No 93
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.56 E-value=8.2e-14 Score=109.05 Aligned_cols=106 Identities=20% Similarity=0.211 Sum_probs=84.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHH------cCCCCceEEEeCCchhHHHHHHhhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK------AGVAHKIDFREGPALPLLDQLIQDV 91 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~~~~~~~~~~ 91 (192)
.+..+|||||||+|..+..+|...+ +..++++|+++.+++.|+++++. .+. .+++++.+|+.+.++...
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~--- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF--- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC---
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC---
Confidence 3456899999999999999998876 78999999999999999988764 233 689999999977555321
Q ss_pred hcccccCCCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEEEe
Q 029536 92 SSTKEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||.|++..... ....+++.+.+.|+|||.+++.
T Consensus 120 ------~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 120 ------YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp ------CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 257899999865311 1257899999999999998863
No 94
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=8.8e-15 Score=117.23 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=88.9
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++++|||+|||+|..++.++...+ .+|+++|+++.+++.|+++++..++.++++++++|+.++..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~------------- 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------------- 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-------------
Confidence 478999999999999999998754 28999999999999999999999998789999999976532
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
.++||+|+++.+ .....+++.+.+.|+|||++++.....
T Consensus 190 ~~~fD~Vi~~~p-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 190 ENIADRILMGYV-VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CSCEEEEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cCCccEEEECCc-hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 468999999876 334678888999999999999866543
No 95
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.55 E-value=1e-14 Score=117.43 Aligned_cols=114 Identities=17% Similarity=0.293 Sum_probs=87.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC---------------------------
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA--------------------------- 70 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--------------------------- 70 (192)
.++++|||||||+|..+..++..++ ..+|+++|+++.+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3678999999999999999999886 679999999999999999987654422
Q ss_pred ------------------------------CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC---------
Q 029536 71 ------------------------------HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--------- 111 (192)
Q Consensus 71 ------------------------------~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--------- 111 (192)
.+++|+++|.......+. ....++||+|++....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~-------~~~~~~fD~I~~~~vl~~ihl~~~~ 196 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLV-------EAQTPEYDVVLCLSLTKWVHLNWGD 196 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHH-------TTCCCCEEEEEEESCHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccc-------cccCCCcCEEEEChHHHHhhhcCCH
Confidence 589999999864322221 1126799999987752
Q ss_pred cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 112 DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 112 ~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
.....+++.+.+.|+|||++++....|.
T Consensus 197 ~~~~~~l~~~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 197 EGLKRMFRRIYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEECCCHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEecCCch
Confidence 1456789999999999999999765554
No 96
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.55 E-value=2e-14 Score=114.71 Aligned_cols=115 Identities=21% Similarity=0.303 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 6 ~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
.....+...+...++.+|||+|||+|..+..+++.+.+.++++++|+++.+++.|+++++..++.++++++.+|..+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 99 KDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 33444444455566789999999999999999998544789999999999999999999998887789999999876521
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.++||+|+++.+ ....+++.+.+.|+|||.+++..
T Consensus 179 -------------~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 179 -------------EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp -------------CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred -------------CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 468999999764 34577888999999999998753
No 97
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.55 E-value=4.6e-14 Score=109.10 Aligned_cols=114 Identities=16% Similarity=0.264 Sum_probs=87.8
Q ss_pred HHHHHH-hHcCCCEEEEEccchhHHHHHHHHhCC----CCcEEEEEeCCchhHHHHHHHHHHcCC----CCceEEEeCCc
Q 029536 10 FFSMLL-KLINAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKEHYEKGLPIIQKAGV----AHKIDFREGPA 80 (192)
Q Consensus 10 ~l~~l~-~~~~~~~ileiG~g~G~~~~~la~~~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~ 80 (192)
++..+. ...++.+|||||||+|..+..+++... +.++++++|+++.+++.|++++...++ ..+++++.+|.
T Consensus 70 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 70 SLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp HHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred HHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh
Confidence 344443 345568999999999999999998864 467999999999999999999998873 36899999998
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.+..+..... .++||+|+++....+. ++.+.+.|+|||.+++.
T Consensus 150 ~~~~~~~~~~--------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 150 YQVNEEEKKE--------LGLFDAIHVGASASEL---PEILVDLLAENGKLIIP 192 (227)
T ss_dssp GGCCHHHHHH--------HCCEEEEEECSBBSSC---CHHHHHHEEEEEEEEEE
T ss_pred HhcccccCcc--------CCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 7643111011 4689999998764433 46778899999998874
No 98
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.55 E-value=2.4e-14 Score=117.35 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC----------CCCceE
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG----------VAHKID 74 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----------~~~~v~ 74 (192)
|.....+...+...++.+|||+|||+|..+..++....+.++++++|+++.+++.|++++...+ ...+++
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 3334444445566778899999999999999999875446899999999999999999998643 336899
Q ss_pred EEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 75 FREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 75 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
++.+|..+....+. .++||+|+++... ...+++.+.+.|+|||.+++-
T Consensus 171 ~~~~d~~~~~~~~~----------~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 171 FIHKDISGATEDIK----------SLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp EEESCTTCCC-----------------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEE
T ss_pred EEECChHHcccccC----------CCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEE
Confidence 99999876543332 4579999998653 234788999999999999863
No 99
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.55 E-value=8.4e-14 Score=104.92 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=87.5
Q ss_pred HHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhh
Q 029536 13 MLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVS 92 (192)
Q Consensus 13 ~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 92 (192)
.++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. ++++++.+|..+..
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~-------- 93 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLT-------- 93 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCC--------
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCC--------
Confidence 3445567789999999999999999976 46999999999999999999988877 46999999986531
Q ss_pred cccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 93 STKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
. .++||+|++... ......+++.+.+.|+|||.+++.+.
T Consensus 94 ----~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 94 ----F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp ----C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 1 568999998765 22567889999999999999776443
No 100
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=2.9e-14 Score=109.30 Aligned_cols=114 Identities=22% Similarity=0.274 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+.....+..++...++.+|||+|||+|..+..++...++..+++++|+++.+++.+++++...+. ++++++.+|....+
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGCC
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccCC
Confidence 44444555555566778999999999999999998874358999999999999999999988887 46999999985432
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+. .++||+|++.....+.. +.+.+.|+|||.+++.
T Consensus 142 ~~------------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 142 EP------------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp GG------------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CC------------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 21 46899999987644433 4778999999998874
No 101
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=1.6e-15 Score=118.31 Aligned_cols=112 Identities=16% Similarity=0.125 Sum_probs=89.3
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
..++..+....++.+|||+|||+|..+..++.. +.+|+++|+++.+++.|++++...++.++++++++|..+..+
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 344445555557899999999999999999986 479999999999999999999999887799999999876531
Q ss_pred HhhhhcccccCCCcccEEEEeCCCcCc---HHHHHHHHhccCCCeEEEEeC
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDADKDNY---VNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~~~~~---~~~~~~~~~~L~~gG~lv~~d 135 (192)
.++||+|+++.+.... ...+..+.+.|+|||+++++.
T Consensus 142 -----------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 -----------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp -----------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred -----------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 5799999998763221 224445678999999977653
No 102
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.55 E-value=1.6e-13 Score=103.65 Aligned_cols=156 Identities=13% Similarity=0.005 Sum_probs=104.4
Q ss_pred HHHHHHHHHhH-cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 7 EAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 7 ~~~~l~~l~~~-~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
-..|...+... ..+.+|||+|||+|-.++.++...| ..+|+++|+++++++.+++++...|...++++ .|....
T Consensus 36 ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-- 110 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-- 110 (200)
T ss_dssp HHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH--
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc--
Confidence 34444444443 5588999999999999999988766 67999999999999999999999998767777 444332
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCC---cCcHHHHHHHHhccCCCeEEEEeCc--cCCccccCCCCCCchhhhhhHHHH
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADK---DNYVNYHKRLIELVKVGGVIGYDNT--LWGGSVVAPPDADLDEHFLYLRDF 160 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~---~~~~~~~~~~~~~L~~gG~lv~~d~--~~~g~~~~~~~~~~~~~~~~~~~~ 160 (192)
. ..++||+|+.--.. ++....+..+.+.|+|||++|--++ +-+.......+ +
T Consensus 111 -~----------~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~---------Y--- 167 (200)
T 3fzg_A 111 -V----------YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEEN---------Y--- 167 (200)
T ss_dssp -H----------TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCC---------H---
T ss_pred -C----------CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhh---------H---
Confidence 1 16889999875431 1112234478899999999997663 22222222222 1
Q ss_pred HHHHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 161 VQELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
-.+|.+.+ .........+.+++-+..+.++
T Consensus 168 ~~~~~~~~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 168 QLWFESFT-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp HHHHHHHT-TTTSCEEEEEEETTEEEEEECC
T ss_pred HHHHHHhc-cCcceeeeeeeeCceEEEEEec
Confidence 23444445 3444555666777777665543
No 103
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.54 E-value=2.5e-13 Score=115.08 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
.+...++..++...++.+|||+|||+|..+..++...+ +++++++|+++..++.++++++..++ +++++++|+.+..
T Consensus 232 d~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPS 308 (429)
T ss_dssp CHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTH
T ss_pred CHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhch
Confidence 34556666677767778999999999999999999876 58999999999999999999999887 4789999987764
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcC-------------------------cHHHHHHHHhccCCCeEEEEeCcc
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDN-------------------------YVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+.+. .++||+|++|++... ...+++.+.+.|||||.+++..+.
T Consensus 309 ~~~~----------~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 309 QWCG----------EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HHHT----------TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred hhcc----------cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4331 468999999975211 136788899999999999987653
No 104
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.54 E-value=2.7e-13 Score=121.38 Aligned_cols=160 Identities=11% Similarity=0.112 Sum_probs=112.8
Q ss_pred HHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc------CCCCceEEEeCCchhHH
Q 029536 11 FSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA------GVAHKIDFREGPALPLL 84 (192)
Q Consensus 11 l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~ 84 (192)
+..++...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.|++++... +. .+++++++|..+..
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCC
Confidence 344445568899999999999999999987644579999999999999999977643 33 58999999987641
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcC-----cHHHHHHHHhccCCCeEEEEeCccC------Ccc----------c-
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDN-----YVNYHKRLIELVKVGGVIGYDNTLW------GGS----------V- 142 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~-----~~~~~~~~~~~L~~gG~lv~~d~~~------~g~----------~- 142 (192)
...++||+|++.....+ ...+++.+.+.|+|| ++++..... .+. .
T Consensus 792 ------------~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~ 858 (950)
T 3htx_A 792 ------------SRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEP 858 (950)
T ss_dssp ------------TTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------
T ss_pred ------------cccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhccccccccccccc
Confidence 12678999999766333 234788899999999 666643221 111 0
Q ss_pred cCCCCCCchhhhhhHHHHHHHHHHHhhcCCCeeEEEeecCCe
Q 029536 143 VAPPDADLDEHFLYLRDFVQELNKALAVDPRIEICQISIADG 184 (192)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G 184 (192)
...........+....+.++++.+.+....++...+.++|+|
T Consensus 859 ~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 859 QLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred ccccccccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 000011111223345566777777788888999999999988
No 105
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.54 E-value=3.3e-14 Score=115.30 Aligned_cols=107 Identities=11% Similarity=0.140 Sum_probs=89.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++.+|..+. + +
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~---------- 181 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P-F---------- 181 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C----------
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C-C----------
Confidence 346799999999999999999874 4789999999999999999999999988999999998653 1 1
Q ss_pred CCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++... .-....+++.+.+.|||||.+++.+...
T Consensus 182 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 2579999998754 2247889999999999999998866443
No 106
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=3.6e-14 Score=115.58 Aligned_cols=114 Identities=18% Similarity=0.312 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+.....+...+...++.+|||||||+|..+..+++..+..++|+++|+++++++.|+++++..++. +++++.+|..+..
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhcc
Confidence 344444444455567789999999999999999987654578999999999999999999998884 5999999987643
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+. .++||+|+++....+.. +.+.+.|||||.+++.
T Consensus 140 ~~------------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 140 PE------------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp GG------------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEE
T ss_pred cc------------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEE
Confidence 21 46899999987754433 5677899999999885
No 107
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.53 E-value=9e-15 Score=113.43 Aligned_cols=104 Identities=13% Similarity=0.177 Sum_probs=85.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+ +++++.+|..+..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~------------- 105 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYD------------- 105 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCC-------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccC-------------
Confidence 3568999999999999999999886 7899999999999999999875543 8999999986541
Q ss_pred CCCcccEEEEeCCCcC-----cHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDADKDN-----YVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~-----~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++.....+ ...+++.+.+.|+|||.+++.+...
T Consensus 106 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 106 FEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 1378999999865221 2358899999999999999876543
No 108
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=1.1e-13 Score=117.02 Aligned_cols=112 Identities=15% Similarity=0.194 Sum_probs=88.2
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHH-------HHHHHHcCCC-CceEEEeCCchhH---H
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKG-------LPIIQKAGVA-HKIDFREGPALPL---L 84 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a-------~~~~~~~~~~-~~v~~~~~d~~~~---~ 84 (192)
...++.+|||+|||+|..++.++...+ ..+|+++|+++.+++.| ++++...++. .+++++.+|.... +
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~ 317 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRV 317 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccc
Confidence 445678999999999999999998755 56899999999999988 8888888854 7899999865321 2
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+.. .++||+|++... .......+..+.+.|+|||.|++.+.+..
T Consensus 318 ~~~-----------~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 318 AEL-----------IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp HHH-----------GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred ccc-----------cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 111 468999998633 24456678899999999999999876543
No 109
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=4.4e-14 Score=110.93 Aligned_cols=113 Identities=17% Similarity=0.127 Sum_probs=91.1
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc-CCCCceEEEeCCchhHHHH
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-GVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~ 86 (192)
...+...+...++.+|||+|||+|..+..++..+.+..+++++|+++.+++.|+++++.. + .++++++.+|..+. .
T Consensus 85 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~--~ 161 (258)
T 2pwy_A 85 ASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA--E 161 (258)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC--C
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc--C
Confidence 334444445567789999999999999999988544789999999999999999999887 7 47899999998664 1
Q ss_pred HHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+ ..++||+|+++.. ....+++.+.+.|+|||.+++..
T Consensus 162 ~----------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 162 L----------EEAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp C----------CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred C----------CCCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 1 1468999999764 34577899999999999988743
No 110
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.53 E-value=3.8e-14 Score=118.38 Aligned_cols=106 Identities=23% Similarity=0.367 Sum_probs=90.8
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++++|||+|||+|..++.++.. ..+|+++|+++.+++.|+++++..++. +++++.+|+.++++.+...
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~-------- 276 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKE-------- 276 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHT--------
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhc--------
Confidence 6789999999999999999987 478999999999999999999999885 4999999998887765433
Q ss_pred CCcccEEEEeCCC------------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 99 HGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 99 ~~~~D~v~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+||+|++|++. ..+.+++..+.+.|+|||++++...
T Consensus 277 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 277 GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 5689999999873 3456788889999999999987543
No 111
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.53 E-value=6.4e-14 Score=109.38 Aligned_cols=113 Identities=19% Similarity=0.321 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+.....+...+...++.+|||+|||+|..+..+++. ..+++++|+++++++.|++++...++.++++++.+|..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 444445555555567789999999999999999987 57999999999999999999999888788999999986532
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
. ..++||+|+++.. ....+++.+.+.|+|||.+++.
T Consensus 154 ~------------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 154 V------------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp C------------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEE
T ss_pred c------------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEE
Confidence 0 1468999999754 3457788899999999998874
No 112
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.53 E-value=3.2e-14 Score=115.42 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=85.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHH---cCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK---AGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
.++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++.. ....++++++.+|+.++....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~------- 165 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT------- 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-------
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-------
Confidence 5788999999999999999998644 68999999999999999998743 223468999999998765431
Q ss_pred cccCCCcccEEEEeCCCcC-------cHHHHHHHHhccCCCeEEEEe
Q 029536 95 KEKYHGTFDFVFVDADKDN-------YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|++|..... ..++++.+.+.|+|||++++.
T Consensus 166 ---~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 166 ---PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp ---CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 1578999999875211 168899999999999999975
No 113
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.53 E-value=1.1e-13 Score=117.81 Aligned_cols=121 Identities=18% Similarity=0.208 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 6 ~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
....++..++...++.+|||+|||+|..+..++..++..++++++|+++..++.++++++..++ ++++++++|+.+..+
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPE 324 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSS
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcch
Confidence 4455666666666778999999999999999999886448999999999999999999999988 479999999865422
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCCcC-------------------------cHHHHHHHHhccCCCeEEEEeCcc
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADKDN-------------------------YVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.+ ..++||+|++|++... ...+++.+.+.|||||.+++..+.
T Consensus 325 ~~----------~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 325 II----------GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp SS----------CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred hh----------ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11 1368999999865211 046788899999999999986553
No 114
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.52 E-value=9.3e-14 Score=119.16 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=96.3
Q ss_pred HHHHHHHHHHhHc--CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 6 DEAQFFSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 6 ~~~~~l~~l~~~~--~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
....++..++... ++.+|||+|||+|..+..+|..++..++|+++|+++.+++.+++++++.++ .+++++++|+.++
T Consensus 102 ~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~~ 180 (479)
T 2frx_A 102 ASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRVF 180 (479)
T ss_dssp HHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTTH
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHHh
Confidence 3444555555555 778999999999999999999876568999999999999999999999998 4799999999765
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCc---------C----------------cHHHHHHHHhccCCCeEEEEeCcc
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKD---------N----------------YVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.... .++||.|++|++.. . ..++++.+.++|||||.|++..+.
T Consensus 181 ~~~~-----------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 181 GAAV-----------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp HHHS-----------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhhc-----------cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 4322 56899999996521 0 135788888999999999986553
No 115
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.52 E-value=1.7e-14 Score=116.61 Aligned_cols=108 Identities=13% Similarity=0.083 Sum_probs=88.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..++....++.+++++|+++.+++.+++++...++.++++++++|..+.. .
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------~ 184 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD------------T 184 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC------------C
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC------------c
Confidence 4568999999999999999863333378999999999999999999999888788999999987641 1
Q ss_pred CCCcccEEEEeCCC------cCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDADK------DNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~~------~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
.++||+|++.... .....+++.+.+.|+|||.+++.+...
T Consensus 185 -~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 185 -REGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp -CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred -cCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 4789999986642 122347899999999999999987654
No 116
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.52 E-value=4.9e-14 Score=109.81 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=91.7
Q ss_pred HHHHHHhHcC-CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 10 FFSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 10 ~l~~l~~~~~-~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
-|+.++...+ +.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.++++++.+|..+.+..
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-- 87 (230)
T 3lec_A 11 RLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-- 87 (230)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--
T ss_pred HHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc--
Confidence 3555665554 46899999999999999998754 6799999999999999999999999988999999998765421
Q ss_pred hhhhcccccCCCcccEEEEeCC-CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~-~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..+||+|++.+- ..-..++++...+.|+++|.+++.-
T Consensus 88 ----------~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 88 ----------ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp ----------GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ----------ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 237999887543 3345678888889999999998754
No 117
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.52 E-value=1.2e-13 Score=110.43 Aligned_cols=108 Identities=15% Similarity=0.121 Sum_probs=87.9
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..+ ...++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++ +++++.+|..+..
T Consensus 111 ~~~~~~-~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---- 180 (286)
T 3m70_A 111 DVVDAA-KIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAAN---- 180 (286)
T ss_dssp HHHHHH-HHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCC----
T ss_pred HHHHHh-hccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEecccccc----
Confidence 344433 4457899999999999999999986 46999999999999999999998877 8999999986541
Q ss_pred hhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|++... ......+++.+.+.|+|||++++..
T Consensus 181 ---------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 181 ---------IQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ---------CCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------ccCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1578999998764 2445689999999999999866643
No 118
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.52 E-value=1e-13 Score=123.84 Aligned_cols=113 Identities=19% Similarity=0.334 Sum_probs=94.4
Q ss_pred HHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC-CceEEEeCCchhHHHHHHhh
Q 029536 12 SMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFREGPALPLLDQLIQD 90 (192)
Q Consensus 12 ~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~ 90 (192)
..+....++++|||+|||+|..++.++... ..+|+++|+|+.+++.|++|++..++. ++++++++|..++++..
T Consensus 532 ~~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~--- 606 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA--- 606 (703)
T ss_dssp HHHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC---
T ss_pred HHHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc---
Confidence 334455678999999999999999988752 467999999999999999999999986 68999999998877653
Q ss_pred hhcccccCCCcccEEEEeCCC--------------cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 91 VSSTKEKYHGTFDFVFVDADK--------------DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~--------------~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.++||+|++|++. ..+.+++..+.++|+|||++++....
T Consensus 607 --------~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 --------NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp --------CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred --------CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 5789999999862 23566788889999999999986554
No 119
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.52 E-value=1.1e-13 Score=110.16 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc-C-CCCceEEEeCCchh
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-G-VAHKIDFREGPALP 82 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~ 82 (192)
+.....+...+...++.+|||+|||+|..+..++..+.+..+++++|+++.+++.|+++++.. + +.++++++.+|..+
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 434444444455566789999999999999999986544789999999999999999999887 5 45789999999866
Q ss_pred HHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 83 LLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.. + ..++||+|+++.. +...+++.+.+.|+|||.+++.
T Consensus 165 ~~--~----------~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~ 202 (280)
T 1i9g_A 165 SE--L----------PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVY 202 (280)
T ss_dssp CC--C----------CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEE
T ss_pred cC--C----------CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEE
Confidence 41 1 1568999999764 3457889999999999999874
No 120
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.52 E-value=3e-14 Score=111.17 Aligned_cols=117 Identities=11% Similarity=0.180 Sum_probs=89.5
Q ss_pred HHHHHHHHHHhHc----CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 6 DEAQFFSMLLKLI----NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 6 ~~~~~l~~l~~~~----~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
....++..++... ++.+|||||||+|..+..++... ..+++++|+++.+++.+++++...+ ..+++++.+|..
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~ 138 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQ 138 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGG
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChh
Confidence 3455666665543 47899999999999999988764 4689999999999999999887654 257899999976
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCCc-----CcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+.. ...++||+|++..... .+..+++.+.+.|+|||.+++.+..
T Consensus 139 ~~~------------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 139 DFT------------PEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp GCC------------CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hcC------------CCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 541 1256899999986522 2447889999999999999885543
No 121
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.52 E-value=3.6e-14 Score=110.31 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=86.5
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..+....++.+|||||||+|..+..++... .+++++|+++.+++.|++.+.. +++++.+|..+..
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~---- 99 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ---- 99 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC----
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC----
Confidence 345555556678899999999999999998763 4799999999999999987532 7999999987651
Q ss_pred hhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHH-hccCCCeEEEEeCc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLI-ELVKVGGVIGYDNT 136 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~-~~L~~gG~lv~~d~ 136 (192)
.+++||+|++... ..+...+++.+. +.|||||.+++...
T Consensus 100 ---------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 100 ---------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ---------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---------cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 1678999998765 235678999999 99999999988653
No 122
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.51 E-value=3.1e-14 Score=108.82 Aligned_cols=99 Identities=11% Similarity=0.035 Sum_probs=76.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC-----------CCCceEEEeCCchhHHHH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG-----------VAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----------~~~~v~~~~~d~~~~~~~ 86 (192)
.++.+|||+|||+|..+.+|++. +.+|+++|+|+.+++.|++...... ...+++++++|..+....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 46789999999999999999986 4689999999999999998754210 125799999998765221
Q ss_pred HHhhhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeE
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGV 130 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~ 130 (192)
- .++||+|+..... .....+++.+.+.|||||.
T Consensus 98 ~-----------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 98 D-----------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp H-----------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred c-----------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 0 1589999975441 2234578899999999997
No 123
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.51 E-value=3.5e-14 Score=118.42 Aligned_cols=103 Identities=13% Similarity=0.057 Sum_probs=85.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC--ceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH--KIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.++.+|||+|||+|..++.++...| ..+|+++|+++.+++.+++++...++.. +++++.+|..+.+
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~----------- 288 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV----------- 288 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC-----------
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC-----------
Confidence 3457999999999999999999876 7899999999999999999999988753 5888999987632
Q ss_pred ccCCCcccEEEEeCCC--------cCcHHHHHHHHhccCCCeEEEEe
Q 029536 96 EKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+++.+. ....++++.+.+.|+|||.+++.
T Consensus 289 --~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 289 --EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp --CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 15689999998662 12246789999999999988873
No 124
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.51 E-value=2.2e-14 Score=114.50 Aligned_cols=108 Identities=15% Similarity=0.219 Sum_probs=86.9
Q ss_pred HHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc-CCCCceEEEeCCchhHHHHHHhh
Q 029536 12 SMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-GVAHKIDFREGPALPLLDQLIQD 90 (192)
Q Consensus 12 ~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~ 90 (192)
...+...++.+|||+|||+|..+..+++.+.+..+++++|+++.+++.|+++++.. +. ++++++.+|..+.+
T Consensus 103 ~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~------ 175 (275)
T 1yb2_A 103 IMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI------ 175 (275)
T ss_dssp ---CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC------
T ss_pred HHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccC------
Confidence 33334456689999999999999999987433789999999999999999999887 74 68999999986632
Q ss_pred hhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 91 VSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|+++.+ +...+++.+.+.|+|||.+++..
T Consensus 176 -------~~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 176 -------SDQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp -------CSCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEE
T ss_pred -------cCCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 1568999999654 44678899999999999998754
No 125
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.51 E-value=8.4e-14 Score=109.32 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=85.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--------CCCCceEEEeCCchhHHHHHHhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--------GVAHKIDFREGPALPLLDQLIQD 90 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~~~~ 90 (192)
+..+|||||||+|..++.++...+ ..+++++|+++.+++.++++++.. ++ ++++++.+|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhc--
Confidence 457899999999999999999876 689999999999999999998876 66 589999999977544321
Q ss_pred hhcccccCCCcccEEEEeCCCcC-----------cHHHHHHHHhccCCCeEEEE
Q 029536 91 VSSTKEKYHGTFDFVFVDADKDN-----------YVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~ 133 (192)
..+.+|.|++..+... +..+++.+.+.|+|||++++
T Consensus 125 -------~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 125 -------EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp -------CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred -------cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 2578999987644221 25899999999999999887
No 126
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=4.5e-14 Score=109.68 Aligned_cols=104 Identities=17% Similarity=0.139 Sum_probs=85.8
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+...+++++.+|..+..+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 129 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP------------- 129 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------------
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------------
Confidence 4569999999999999988752 678999999999999999998876666789999999876421
Q ss_pred CCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 99 HGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 99 ~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
.++||+|++... ......+++.+.+.|+|||.+++.....
T Consensus 130 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 130 TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 568999998654 2356788999999999999998865543
No 127
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.51 E-value=7.2e-14 Score=110.53 Aligned_cols=114 Identities=11% Similarity=0.002 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHH----------c------CC
Q 029536 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK----------A------GV 69 (192)
Q Consensus 6 ~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~----------~------~~ 69 (192)
...+++..+....++.+|||+|||+|..+.+|++. +.+|++||+|+.+++.|++.... . ..
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 33344444333346789999999999999999976 56899999999999999765431 0 01
Q ss_pred CCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEE
Q 029536 70 AHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 70 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
..+++++++|..+.... ..++||+|+.... ......+++.+.+.|||||.+++
T Consensus 132 ~~~i~~~~~D~~~l~~~-----------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRA-----------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp TSSEEEEESCTTTGGGG-----------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CCceEEEECccccCCcc-----------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 25799999998765211 1278999986543 23346789999999999999864
No 128
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=2.5e-14 Score=109.58 Aligned_cols=108 Identities=14% Similarity=0.197 Sum_probs=85.5
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
++..+....++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++... ++++++.+|..+..
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~----- 110 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS----- 110 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-----
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-----
Confidence 4444444555679999999999999999876 468999999999999999987653 38999999987653
Q ss_pred hhhcccccCCCcccEEEEeCCC------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 90 DVSSTKEKYHGTFDFVFVDADK------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~~------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++.... .....+++.+.+.|+|||++++...
T Consensus 111 --------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 111 --------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp --------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred --------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 16799999998552 1224678999999999999998543
No 129
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=1.1e-13 Score=116.08 Aligned_cols=105 Identities=22% Similarity=0.326 Sum_probs=85.8
Q ss_pred hHcC-CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 16 KLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 16 ~~~~-~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
...+ +++|||+|||+|..++.++.. +++|+++|+++.+++.|+++++..++.. ++.++|+.++++..
T Consensus 210 ~~~~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------- 277 (393)
T 4dmg_A 210 AMVRPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------- 277 (393)
T ss_dssp TTCCTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC-------
T ss_pred HHhcCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh-------
Confidence 3445 789999999999999999986 3459999999999999999999998864 46699998876653
Q ss_pred cccCCCcccEEEEeCCC------------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+.||+|++|++. ..+.++++.+.++|+|||++++..+
T Consensus 278 ----~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 278 ----EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp ----CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ----cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 3449999999873 2456788888999999999985443
No 130
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.51 E-value=1.1e-13 Score=106.94 Aligned_cols=111 Identities=18% Similarity=0.258 Sum_probs=86.2
Q ss_pred HHHHHHH-hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC----CCceEEEeCCchhH
Q 029536 9 QFFSMLL-KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV----AHKIDFREGPALPL 83 (192)
Q Consensus 9 ~~l~~l~-~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~ 83 (192)
.++..+. ...++.+|||+|||+|..+..+++...+.++|+++|+++.+++.+++++...+. .++++++.+|....
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 3444443 244568999999999999999998764357999999999999999999988764 46899999998643
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.. ..++||+|+++....+. ++.+.+.|+|||.+++.
T Consensus 146 ~~------------~~~~fD~i~~~~~~~~~---~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 146 YA------------EEAPYDAIHVGAAAPVV---PQALIDQLKPGGRLILP 181 (226)
T ss_dssp CG------------GGCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred cc------------cCCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 21 14689999998764333 45778999999999874
No 131
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.51 E-value=1.8e-13 Score=108.52 Aligned_cols=112 Identities=12% Similarity=0.089 Sum_probs=86.1
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCch------hHHHHHHHHHHcCCCCceEEEeCC-chhHHHHHHh
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKE------HYEKGLPIIQKAGVAHKIDFREGP-ALPLLDQLIQ 89 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~ 89 (192)
..++.+|||||||+|..+..++...++..+++++|+++. +++.|++++...++.++++++.+| .......+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-- 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI-- 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC--
Confidence 346679999999999999999988633689999999997 999999999988887799999998 21110011
Q ss_pred hhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++... ..+...+++.+..+++|||.+++.+...
T Consensus 119 --------~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 119 --------ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp --------TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred --------CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 2578999998765 2334456666777777899999876554
No 132
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.50 E-value=7.4e-14 Score=109.67 Aligned_cols=112 Identities=11% Similarity=0.148 Sum_probs=90.8
Q ss_pred HHHHHhHcC-CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 11 FSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 11 l~~l~~~~~-~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
|+.++...+ +.+|||||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.++++++.+|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--- 87 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--- 87 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---
Confidence 455555554 46899999999999999998754 6799999999999999999999999988999999998765321
Q ss_pred hhhcccccCCCcccEEEEeCC-CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~-~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..+||+|++.+- ..-..++++...+.|++++.+|+.-
T Consensus 88 ---------~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 88 ---------KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp ---------GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ---------cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 235999886432 3446778888889999999998754
No 133
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.50 E-value=5.5e-14 Score=108.72 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=83.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++.+.. ++++++.+|..+... ...
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~-~~~-------- 139 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEE-YRA-------- 139 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGG-GTT--------
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcch-hhc--------
Confidence 35679999999999999999987644689999999999999998887654 689999999865321 100
Q ss_pred CCCcccEEEEeCCCcCcH-HHHHHHHhccCCCeEEEEe
Q 029536 98 YHGTFDFVFVDADKDNYV-NYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~-~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+++....... .++..+.+.|+|||.+++.
T Consensus 140 ~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 145899999987744443 4489999999999999886
No 134
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.50 E-value=1.8e-13 Score=113.06 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.+..+..+..++...+..++||+|||+|..++.++....+..+++++|+++.+++.|+++++.+++. ++++.++|+.++
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 3444455555555566789999999999999999987623689999999999999999999999997 999999999775
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEEEe
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
... ...||+|++|++.. .|..+++.+.+.|+|||.+++-
T Consensus 267 ~~~------------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 267 PRF------------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGT------------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ccc------------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 321 45689999987621 1356788889999999988863
No 135
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.50 E-value=1.7e-13 Score=103.81 Aligned_cols=112 Identities=15% Similarity=0.098 Sum_probs=88.4
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
++..++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++.+|..+. + +
T Consensus 20 ~l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~-~-~-- 90 (202)
T 2kw5_A 20 FLVSVANQIPQGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADF-D-I-- 90 (202)
T ss_dssp SHHHHHHHSCSSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTB-S-C--
T ss_pred HHHHHHHhCCCCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhc-C-C--
Confidence 4555555455559999999999999998875 46999999999999999999987765 799999987654 1 1
Q ss_pred hhhcccccCCCcccEEEEeCCC---cCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 90 DVSSTKEKYHGTFDFVFVDADK---DNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~~---~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++.... .....+++.+.+.|+|||.+++.....
T Consensus 91 --------~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 91 --------VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --------CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --------CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 25789999986432 245678899999999999999876543
No 136
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=1.6e-13 Score=107.43 Aligned_cols=109 Identities=21% Similarity=0.326 Sum_probs=87.0
Q ss_pred HHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 8 AQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 8 ~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
..++..++.. .++.+|||+|||+|..+..++.. +.+++++|+++.+++.|++++...+. +++++++|..+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 4556666554 34579999999999999999875 56899999999999999999987765 6999999987641
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
. .++||+|++... ......+++.+.+.|+|||+++++
T Consensus 102 --~-----------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 102 --F-----------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp --C-----------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --c-----------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 1 468999997533 123567888999999999999875
No 137
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.50 E-value=1.2e-13 Score=107.64 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+.....+..++...++.+|||+|||+|..+..+++..+ .+++++|+++.+++.|++++...++. +++++.+|....+
T Consensus 77 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 153 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGF 153 (235)
T ss_dssp HHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCC
Confidence 44444555555666778999999999999999998864 78999999999999999999988884 5999999973222
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+. ..+||+|+++....... +.+.+.|+|||.+++.
T Consensus 154 ~~------------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 154 PP------------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIP 188 (235)
T ss_dssp GG------------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CC------------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEE
Confidence 11 34699999987644333 3677899999998874
No 138
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.50 E-value=1.5e-13 Score=105.83 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=79.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++...+ .++|+++|+++.+++.+.+..+.. .++.++.+|........ +
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~--------~- 122 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS--------G- 122 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT--------T-
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc--------c-
Confidence 3567999999999999999999876 689999999999887666655442 47888888875431100 0
Q ss_pred CCCcccEEEEeCCCcC-cHHHHHHHHhccCCCeEEEEe
Q 029536 98 YHGTFDFVFVDADKDN-YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~-~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+++..... ...+++.+.+.|||||.+++.
T Consensus 123 ~~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 123 IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1468999999865333 233588999999999999886
No 139
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.49 E-value=6.5e-14 Score=112.17 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=88.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++++|||+|||+|..++.+|... ..+|+++|++|.+++.+++|++..++.++++++++|+.++..
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~------------ 189 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------------ 189 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC------------
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc------------
Confidence 357899999999999999998763 468999999999999999999999999999999999977632
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.+.||.|+++.+.. ..++++.+.++|++||+|.++...
T Consensus 190 -~~~~D~Vi~~~p~~-~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 190 -ENIADRILMGYVVR-THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp -CSCEEEEEECCCSS-GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -ccCCCEEEECCCCc-HHHHHHHHHHHcCCCCEEEEEeee
Confidence 57899999987643 356788889999999999876543
No 140
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.49 E-value=1.6e-13 Score=114.58 Aligned_cols=115 Identities=11% Similarity=0.118 Sum_probs=93.5
Q ss_pred CCHHHHHHHHHHHhHc-----CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEe
Q 029536 3 TSPDEAQFFSMLLKLI-----NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE 77 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~~-----~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 77 (192)
..+....++..+.... ++.+|||+|||+|..+..++.. +.+|+++|+++.+++.|++++...++. ++++.
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~ 286 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALH 286 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEE
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEE
Confidence 3466777777776643 5679999999999999999986 469999999999999999999988763 89999
Q ss_pred CCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--------cCcHHHHHHHHhccCCCeEEEEe
Q 029536 78 GPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 78 ~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+|..+... ..++||+|+++.+. .....+++.+.+.|+|||.+++.
T Consensus 287 ~D~~~~~~------------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 287 SDVDEALT------------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CSTTTTSC------------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhccc------------cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99876532 14799999998652 23457889999999999988874
No 141
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.49 E-value=5.2e-14 Score=109.38 Aligned_cols=103 Identities=15% Similarity=0.070 Sum_probs=82.3
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||+|||+|..+..++...+ .++|+++|+++.+++.++++.+.. +++.++.+|..+..... + .
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~--------~-~ 140 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYA--------N-I 140 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGT--------T-T
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccccc--------c-c
Confidence 567999999999999999999876 689999999999999999886543 68999999986521111 1 1
Q ss_pred CCcccEEEEeCC-CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~-~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|+.+.. +.....+++.+.+.|+|||.+++.
T Consensus 141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 368999997754 333466799999999999999885
No 142
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.49 E-value=1.5e-14 Score=115.16 Aligned_cols=98 Identities=9% Similarity=-0.007 Sum_probs=80.9
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CC-CCceEEEeCCchhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..++++|||||||+|..+..+++. + .+++++|+++.+++.|++++... ++ .++++++.+|+.+++
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--------- 137 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--------- 137 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---------
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---------
Confidence 346789999999999999999887 4 79999999999999999876431 12 368999999986542
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
++||+|++|... ...+++.+.+.|+|||++++.
T Consensus 138 ------~~fD~Ii~d~~d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 ------KKYDLIFCLQEP--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ------CCEEEEEESSCC--CHHHHHHHHTTEEEEEEEEEE
T ss_pred ------hhCCEEEECCCC--hHHHHHHHHHhcCCCcEEEEE
Confidence 479999999643 345899999999999999974
No 143
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.49 E-value=4.2e-13 Score=107.38 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=91.2
Q ss_pred HHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC---CceEEEeCCchhH
Q 029536 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA---HKIDFREGPALPL 83 (192)
Q Consensus 7 ~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~ 83 (192)
...++..++...++.+|||||||+|..+..++.. +.+++++|+++.+++.|+++....+.. .++.+..+|..+.
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 45 YKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred HHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 3456666667778899999999999999999986 459999999999999999887554432 4688999998765
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeC-C---CcC-------cHHHHHHHHhccCCCeEEEEeC
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDA-D---KDN-------YVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~-~---~~~-------~~~~~~~~~~~L~~gG~lv~~d 135 (192)
...+ +..++||+|++.+ . ..+ ...+++.+.+.|+|||++++..
T Consensus 122 ~~~~---------~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 122 DKDV---------PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHS---------CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccc---------ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 3222 0267999999863 2 223 6789999999999999999753
No 144
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=107.47 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=81.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||+|||+|..+..+++..++.++++++|+++.+++.+.++.+.. .+++++.+|..+... +.. .
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~-~~~--------~ 144 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHK-YRM--------L 144 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGG-GGG--------G
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhh-hcc--------c
Confidence 4679999999999999999988643689999999999888777777664 589999999876321 110 1
Q ss_pred CCcccEEEEeCCCcC-cHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDADKDN-YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~~-~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|+++..... ...++..+.+.|+|||++++.
T Consensus 145 ~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 145 IAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 578999999876322 344578899999999999883
No 145
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.49 E-value=8.8e-14 Score=116.11 Aligned_cols=117 Identities=15% Similarity=0.272 Sum_probs=91.7
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc-----C-C-CCceEEEeCCchhHHHHHHh
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-----G-V-AHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~-~-~~~v~~~~~d~~~~~~~~~~ 89 (192)
..++.+|||+|||+|..+..++...++..+|+++|+++.+++.|+++++.. | . .++++++.+|..+.....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~-- 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE-- 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB--
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc--
Confidence 346789999999999999999988744789999999999999999988765 3 2 268999999987642100
Q ss_pred hhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
..+...++||+|++... ..+...+++.+.+.|||||++++.+....
T Consensus 159 ----~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 159 ----PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp ----SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred ----cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 00112579999998875 34567899999999999999999766543
No 146
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=3.8e-13 Score=101.99 Aligned_cols=109 Identities=13% Similarity=0.003 Sum_probs=87.8
Q ss_pred HHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 7 ~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
...++..+.... +.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ++++++.+|..+. +
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~- 97 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDL-S- 97 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGG-G-
T ss_pred HHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCccccc-c-
Confidence 345666666554 789999999999999999976 458999999999999999862 4799999998764 1
Q ss_pred HHhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+ ..++||+|++... ......+++.+.+.|+|||.+++....
T Consensus 98 ~----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 98 D----------SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp G----------SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred c----------CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 2 2679999998764 236688999999999999999986644
No 147
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.48 E-value=1.2e-13 Score=107.99 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=85.8
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..++.+|||+|||+|..+..+|+...+.++|+++|+++++++.++++.++. .++..+.+|....... +
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~---------~ 142 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKY---------R 142 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGG---------T
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCcccc---------c
Confidence 345689999999999999999998766899999999999999998876543 5788888887543211 1
Q ss_pred cCCCcccEEEEeCC-CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 97 KYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 97 ~~~~~~D~v~id~~-~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
...+.+|+||.|.. +.....++.++.+.|||||.+++..
T Consensus 143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 12678999999876 4445678899999999999988753
No 148
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.48 E-value=1.8e-13 Score=104.13 Aligned_cols=117 Identities=14% Similarity=0.183 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
....+++..+....++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++...+ .+++++.+|..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~- 83 (209)
T 2p8j_A 9 PQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL- 83 (209)
T ss_dssp THHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC-
T ss_pred hhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC-
Confidence 3445667666666778999999999999755544432 5799999999999999999988765 4688999998653
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+ + ..++||+|++.... .....+++.+.+.|+|||.+++....
T Consensus 84 ~-~----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 84 P-F----------KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp C-S----------CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C-C----------CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 1 25789999986541 34567889999999999999987654
No 149
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.48 E-value=8.4e-14 Score=110.46 Aligned_cols=105 Identities=14% Similarity=0.170 Sum_probs=82.0
Q ss_pred HHHHHHHhHcC-CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 9 QFFSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 9 ~~l~~l~~~~~-~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
+++..|..... ..+|||||||+|..+..|+.. ..+|+++|+|+.+++.|++ .++++++++++.+.
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~---- 93 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDT---- 93 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCC----
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhh----
Confidence 35555555443 468999999999999999876 4689999999999887653 25899999998654
Q ss_pred HhhhhcccccCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+..+++||+|++... .-+...++..+.+.|||||++++-.
T Consensus 94 --------~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 94 --------GLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp --------CCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------cccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 123789999998654 3346788999999999999987643
No 150
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.48 E-value=5.6e-13 Score=111.58 Aligned_cols=113 Identities=14% Similarity=0.073 Sum_probs=86.5
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHH-------HHcCC-CCceEEEeCCchhHHHHH
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPII-------QKAGV-AHKIDFREGPALPLLDQL 87 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-------~~~~~-~~~v~~~~~d~~~~~~~~ 87 (192)
...+..+|||||||+|..++.+|...+ ..+++|||+++.+++.|+++. +..++ ..+++|+++|..+.- +
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp--~ 246 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE--W 246 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH--H
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc--c
Confidence 445678999999999999999998754 457999999999999998764 34565 368999999987642 1
Q ss_pred HhhhhcccccCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
... -..||+||+... .......+..+.+.|||||.|++.+.+..
T Consensus 247 ~d~--------~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 247 RER--------IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHH--------HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccc--------cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 100 147999998754 34456677788899999999999776643
No 151
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.48 E-value=3.7e-13 Score=111.10 Aligned_cols=104 Identities=15% Similarity=0.189 Sum_probs=87.0
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...++++|||+|||+|..+..+++. + ..+|+++|++ ++++.|+++++..++.++++++.+|..+. .+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-------- 129 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV--EL-------- 129 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC--CC--------
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc--cC--------
Confidence 4567899999999999999999987 3 5799999999 59999999999999988899999998765 12
Q ss_pred ccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 96 EKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 96 ~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+.+.. ......++..+.+.|||||+++.+
T Consensus 130 --~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 --PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp --SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred --CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1579999998642 345567788888999999999754
No 152
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.47 E-value=1.2e-13 Score=108.66 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=89.0
Q ss_pred HHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 9 QFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 9 ~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
..+..++.. .++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++... ++++++.+|..+. +
T Consensus 42 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~ 115 (266)
T 3ujc_A 42 EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-E 115 (266)
T ss_dssp HHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-C
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-C
Confidence 334444443 356799999999999999999875 579999999999999999876543 6899999998654 1
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
+ ..++||+|++.... .+...+++.+.+.|+|||.+++.+...
T Consensus 116 -~----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 116 -F----------PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp -C----------CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -C----------CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 1 26799999997652 455778999999999999999876543
No 153
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.47 E-value=1.2e-13 Score=111.14 Aligned_cols=109 Identities=16% Similarity=0.116 Sum_probs=90.8
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC----CCCceEEEeCCchhHHHHHHh
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG----VAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~ 89 (192)
++...+|++||-||.|.|..++.+++..+ ..+++.||+++..++.+++++.... -+++++++.+|+..++...
T Consensus 78 l~~~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-- 154 (294)
T 3o4f_A 78 LLAHGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-- 154 (294)
T ss_dssp HHHSSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS--
T ss_pred HhhCCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc--
Confidence 34457899999999999999999998754 6899999999999999999986532 1479999999999887542
Q ss_pred hhhcccccCCCcccEEEEeCCC-------cCcHHHHHHHHhccCCCeEEEEe
Q 029536 90 DVSSTKEKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|... -...++++.+.+.|+|||+++..
T Consensus 155 ---------~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 155 ---------SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp ---------SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred ---------cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 6799999999751 12468999999999999999963
No 154
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.47 E-value=2.7e-13 Score=112.38 Aligned_cols=109 Identities=15% Similarity=0.116 Sum_probs=89.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..+++..| +.+++++|+ |.+++.|++++...++.++++++.+|..+....+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF---------- 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC----------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC----------
Confidence 4678999999999999999999887 789999999 9999999999998888789999999986431001
Q ss_pred CCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 98 YHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 98 ~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+++||+|++.... .....+++++.+.|+|||.+++.+..++
T Consensus 246 -p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 246 -PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp -CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred -CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 4689999986542 2235678999999999999988776554
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.47 E-value=2.4e-13 Score=105.17 Aligned_cols=109 Identities=20% Similarity=0.262 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+.....+...+...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+ +++++.+|..+.+
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccc
Confidence 3344444444455667899999999999999999873 789999999999999999987655 7999999987632
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+. .++||+|+++....+.. +.+.+.|+|||.+++.
T Consensus 130 ~~------------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 130 EE------------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILP 164 (231)
T ss_dssp GG------------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred cc------------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEE
Confidence 21 56899999987644433 4678899999998875
No 156
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.46 E-value=6.7e-13 Score=102.02 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=86.7
Q ss_pred HHHHHHhH-cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 10 FFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 10 ~l~~l~~~-~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
++..+... .++.+|||+|||+|..+..++...+ +++++|+++.+++.+++++...+ .+++++.+|..+.. +
T Consensus 28 ~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~- 99 (227)
T 1ve3_A 28 LEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--F- 99 (227)
T ss_dssp HHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--S-
T ss_pred HHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--C-
Confidence 33444433 2467999999999999999988743 89999999999999999988766 58999999986531 1
Q ss_pred hhhhcccccCCCcccEEEEeCC--Cc---CcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD--KD---NYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~--~~---~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++... .. +...+++.+.+.|+|||.+++.+..
T Consensus 100 ---------~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 100 ---------EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ---------CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 1568999998765 22 3457889999999999999886543
No 157
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.46 E-value=2.5e-13 Score=113.23 Aligned_cols=106 Identities=15% Similarity=0.196 Sum_probs=87.8
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...++++|||+|||+|..+..+++.. ..+|+++|++ .+++.|+++++..++.++++++++|..+.. +
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-------- 126 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS--L-------- 126 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC--C--------
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC--c--------
Confidence 34567899999999999999999872 4599999999 999999999999999888999999997652 1
Q ss_pred ccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 96 EKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 96 ~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.++||+|+++.. ......++..+.+.|+|||++++....
T Consensus 127 ---~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 127 ---PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp ---SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred ---CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 478999999652 133566888888999999999876543
No 158
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.46 E-value=2.6e-13 Score=103.61 Aligned_cols=108 Identities=18% Similarity=0.207 Sum_probs=86.4
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..+....++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++ .+. .+++++.+|..+. .
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~---~- 103 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW---T- 103 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC---C-
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC---C-
Confidence 44555544556689999999999999999987 5699999999999999887 343 5799999998765 1
Q ss_pred hhhhcccccCCCcccEEEEeCCCcC-----cHHHHHHHHhccCCCeEEEEeCcc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDADKDN-----YVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~~~~-----~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++.....+ ...+++.+.+.|+|||.+++.+..
T Consensus 104 ---------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 104 ---------PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp ---------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 1689999999865221 367889999999999999887653
No 159
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=2.5e-13 Score=106.48 Aligned_cols=98 Identities=12% Similarity=0.223 Sum_probs=82.0
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..++...+ .+++++|+++.+++.+++++. ..+++++.+|..+. + + .
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~-~-~----------~ 105 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI-A-I----------E 105 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC-C-C----------C
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC-C-C----------C
Confidence 578999999999999999998743 399999999999999998764 46899999998653 1 1 2
Q ss_pred CCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 99 HGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++... ..+...+++.+.+.|+|||.+++.
T Consensus 106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 579999998865 345678999999999999999985
No 160
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.46 E-value=1.3e-13 Score=107.43 Aligned_cols=98 Identities=13% Similarity=0.086 Sum_probs=80.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..++.. +.+++++|+++.+++.++++ ++++.+|..+.+..+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~---------- 97 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL---------- 97 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS----------
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc----------
Confidence 35689999999999999999886 45799999999999988864 788999987765443
Q ss_pred CCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 98 YHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 98 ~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++... ......+++.+.+.|||||.+++....
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 2679999998765 224578999999999999999886543
No 161
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.46 E-value=8.3e-13 Score=110.16 Aligned_cols=107 Identities=21% Similarity=0.287 Sum_probs=90.3
Q ss_pred HhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc---------------CCCCceEEEeCC
Q 029536 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA---------------GVAHKIDFREGP 79 (192)
Q Consensus 15 ~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------~~~~~v~~~~~d 79 (192)
+...++.+|||+|||+|..++.++...+ ..+|+++|+++++++.+++|++.. ++. +++++++|
T Consensus 43 l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~D 120 (378)
T 2dul_A 43 LNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDD 120 (378)
T ss_dssp HHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESC
T ss_pred HHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCc
Confidence 3344788999999999999999998865 578999999999999999999988 774 49999999
Q ss_pred chhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 80 ALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+.+++... ..+||+|++|+. ....++++.+.+.|++||++++.-
T Consensus 121 a~~~~~~~-----------~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 121 ANRLMAER-----------HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHHS-----------TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhc-----------cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 98876543 458999999874 345788999999999999887753
No 162
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.46 E-value=4.7e-13 Score=102.62 Aligned_cols=108 Identities=17% Similarity=0.191 Sum_probs=84.8
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..+. ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++. .+++++.+|..+..
T Consensus 36 ~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~---- 102 (220)
T 3hnr_A 36 DILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFE---- 102 (220)
T ss_dssp HHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCC----
T ss_pred HHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcC----
Confidence 4455443 347789999999999999999976 5799999999999999998764 57899999986641
Q ss_pred hhhhcccccCCCcccEEEEeCCCc---Cc--HHHHHHHHhccCCCeEEEEeCccC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDADKD---NY--VNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~~~---~~--~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
. .++||+|++..... .. ..+++.+.+.|+|||.+++.+..+
T Consensus 103 --------~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 103 --------V-PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp --------C-CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred --------C-CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 1 37899999986522 22 238899999999999999876543
No 163
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=6.8e-14 Score=109.97 Aligned_cols=119 Identities=14% Similarity=0.128 Sum_probs=86.7
Q ss_pred HHHHHHHhHc---CCCEEEEEccchhHHHHHHHHh--CCCCcEEEEEeCCchhHHHHHHHHHHc---CCCCc--------
Q 029536 9 QFFSMLLKLI---NAKNTMEIGVFTGYSLLATALA--IPDDGKILALDITKEHYEKGLPIIQKA---GVAHK-------- 72 (192)
Q Consensus 9 ~~l~~l~~~~---~~~~ileiG~g~G~~~~~la~~--~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~~~~-------- 72 (192)
.++..++... ++.+|||+|||+|..+..++.. .+ ..+++++|+++.+++.|++++... ++..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 4555555443 4579999999999999999987 33 578999999999999999988765 44222
Q ss_pred -----------------eE-------------EEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC-----------
Q 029536 73 -----------------ID-------------FREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK----------- 111 (192)
Q Consensus 73 -----------------v~-------------~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~----------- 111 (192)
++ ++++|..+..+..... ...+||+|+++.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~~fD~Iv~npp~~~~~~~~~~~~ 189 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-------AGSAPDVVLTDLPYGERTHWEGQVP 189 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-------TTCCCSEEEEECCGGGSSSSSSCCC
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeeccccccccccccc-------CCCCceEEEeCCCeecccccccccc
Confidence 66 9999986643210000 13489999998651
Q ss_pred -cCcHHHHHHHHhccCCCeEEEEeC
Q 029536 112 -DNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 112 -~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..+..+++.+.+.|+|||++++.+
T Consensus 190 ~~~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 190 GQPVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCcEEEEeC
Confidence 123478889999999999998743
No 164
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.45 E-value=7.2e-14 Score=108.24 Aligned_cols=112 Identities=16% Similarity=0.194 Sum_probs=85.1
Q ss_pred HHHHHHHH-hHcCCCEEEEEccchhHHHHHHHHhCCC-----CcEEEEEeCCchhHHHHHHHHHHcCC----CCceEEEe
Q 029536 8 AQFFSMLL-KLINAKNTMEIGVFTGYSLLATALAIPD-----DGKILALDITKEHYEKGLPIIQKAGV----AHKIDFRE 77 (192)
Q Consensus 8 ~~~l~~l~-~~~~~~~ileiG~g~G~~~~~la~~~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~ 77 (192)
..++..+. ...+..+|||||||+|+.+..+++..+. .++|+++|+++++++.|++++...+. ..+++++.
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 34444443 2345679999999999999999986531 25999999999999999999887651 25899999
Q ss_pred CCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 78 GPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 78 ~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+|..+.++. .++||+|+++....+. .+.+.+.|+|||.+++.
T Consensus 152 ~d~~~~~~~------------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 152 GDGRKGYPP------------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp SCGGGCCGG------------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCc------------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 998653221 3689999998764433 36778899999999874
No 165
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.45 E-value=3.3e-13 Score=104.80 Aligned_cols=109 Identities=17% Similarity=0.179 Sum_probs=87.3
Q ss_pred HHHHHHHHhHc--CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 8 AQFFSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 8 ~~~l~~l~~~~--~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
.+++..++... ++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++.+|..+..
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~- 97 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN- 97 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC-
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC-
Confidence 34455555443 6789999999999999998876 46899999999999999999987765 7999999986541
Q ss_pred HHHhhhhcccccCCCcccEEEEeC-C---C---cCcHHHHHHHHhccCCCeEEEEe
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDA-D---K---DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~-~---~---~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+ .++||+|++.. . . .....+++.+.+.|+|||.++++
T Consensus 98 -~-----------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 -I-----------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -C-----------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -c-----------cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 46899999976 3 1 34567889999999999999984
No 166
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.45 E-value=1.3e-12 Score=107.01 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=86.3
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
.....++++|||+|||+|..+..+++. + ..+|+++|++ .+++.|+++++..++.++++++.+|..+.. +
T Consensus 33 ~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~------ 101 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L------ 101 (328)
T ss_dssp HHHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C------
T ss_pred hHhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C------
Confidence 345667899999999999999998876 3 4699999999 599999999999999889999999987641 1
Q ss_pred ccccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+++.. ......++..+.+.|+|||.++.+
T Consensus 102 ----~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 102 ----PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ----SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ----CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 1478999998743 233467788888999999999743
No 167
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.45 E-value=8.4e-14 Score=109.53 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhHc-----CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCC
Q 029536 5 PDEAQFFSMLLKLI-----NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP 79 (192)
Q Consensus 5 ~~~~~~l~~l~~~~-----~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 79 (192)
++...++..++... ++.+|||+|||+|..+..++...+ +.+++++|+++.+++.|++++...++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 45666777776543 467999999999999999988765 589999999999999999999999987789999999
Q ss_pred chh-HHHHHHhhhhcccccCCCcccEEEEeCC
Q 029536 80 ALP-LLDQLIQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
..+ ++..+... ..++||+|+++++
T Consensus 125 ~~~~~~~~~~~~-------~~~~fD~i~~npp 149 (254)
T 2h00_A 125 QKTLLMDALKEE-------SEIIYDFCMCNPP 149 (254)
T ss_dssp TTCSSTTTSTTC-------CSCCBSEEEECCC
T ss_pred hhhhhhhhhhcc-------cCCcccEEEECCC
Confidence 765 22222100 0158999999865
No 168
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.45 E-value=7.2e-13 Score=109.03 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=84.6
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|..+. .+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~-------- 127 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV--HL-------- 127 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS--CC--------
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh--cC--------
Confidence 3467789999999999999999886 3 46999999996 9999999999999888999999998764 11
Q ss_pred ccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEE
Q 029536 96 EKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 96 ~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
..++||+|++... ......++..+.+.|||||.++.
T Consensus 128 --~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 128 --PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp --SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred --CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 1478999998752 22345678888899999999984
No 169
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.45 E-value=6.8e-13 Score=111.00 Aligned_cols=104 Identities=16% Similarity=0.121 Sum_probs=89.6
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCc-eEEEeCCchhHHH-HHHhhhhcccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHK-IDFREGPALPLLD-QLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-v~~~~~d~~~~~~-~~~~~~~~~~~ 96 (192)
++.+|||++||+|..++.++...+...+|+++|+++.+++.+++|++..++.++ ++++.+|+.+++. .+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~--------- 122 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW--------- 122 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC---------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh---------
Confidence 467999999999999999998754237899999999999999999999999766 9999999988776 43
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|+ .....++++.+.+.|++||+|++.
T Consensus 123 --~~~fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 123 --GFGFDYVDLDP-FGTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp --SSCEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEE
Confidence 46899999998 444567899999999999988774
No 170
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.45 E-value=5.7e-13 Score=102.09 Aligned_cols=105 Identities=10% Similarity=0.130 Sum_probs=82.9
Q ss_pred HhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 15 ~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
+...++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++ .++++..++..+......
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~------ 111 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKV------ 111 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCS------
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccc------
Confidence 34456799999999999999999876 56899999999999999886 467788888766522110
Q ss_pred cccCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 95 KEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
....+||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 112 --~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 112 --PVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp --CCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --ccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 12456999998765 456788999999999999999986653
No 171
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.45 E-value=8.3e-13 Score=103.70 Aligned_cols=100 Identities=23% Similarity=0.177 Sum_probs=82.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+..++++++.+|..+. + +
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~-~-~---------- 100 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAI-P-L---------- 100 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSC-C-S----------
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccC-C-C----------
Confidence 45689999999999999999875 578999999999999999987 23346899999998653 1 1
Q ss_pred CCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 98 YHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 98 ~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++.
T Consensus 101 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 101 PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 2578999998765 234578899999999999999876
No 172
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.45 E-value=4.6e-13 Score=104.61 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=78.7
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..+..+|||+|||+|..+..+++...+.++|+++|+++.+++...+..++. .++.++.+|+...... .
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~-~-------- 141 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSY-K-------- 141 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGT-T--------
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhh-h--------
Confidence 345689999999999999999988765789999999999876554444332 5899999998643110 0
Q ss_pred cCCCcccEEEEeCCCcCcHHHH-HHHHhccCCCeEEEEe
Q 029536 97 KYHGTFDFVFVDADKDNYVNYH-KRLIELVKVGGVIGYD 134 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~-~~~~~~L~~gG~lv~~ 134 (192)
...++||+||+|.......+.+ ..+.+.|||||.+++.
T Consensus 142 ~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 142 SVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 0146899999998765545544 4455599999999875
No 173
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.44 E-value=1.3e-12 Score=104.33 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=86.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++++...+...+++++.+|..+. + +.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~--------- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-H-MD--------- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-C-CC---------
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-c-cC---------
Confidence 46789999999999999988876 3 4699999999999999999999888777899999998654 1 10
Q ss_pred CCCcccEEEEeCCC-------cCcHHHHHHHHhccCCCeEEEEeC
Q 029536 98 YHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 98 ~~~~~D~v~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|++.... .....+++.+.+.|+|||.+++..
T Consensus 130 ~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 15789999987652 234678899999999999998754
No 174
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.44 E-value=6.8e-13 Score=108.99 Aligned_cols=100 Identities=20% Similarity=0.096 Sum_probs=85.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..++. +. + ..+|+++|+++.+++.++++++..++.++++++++|+.+++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------------- 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------------- 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-------------
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-------------
Confidence 4778999999999999999 76 3 68999999999999999999999998779999999987652
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
++||+|++|.+.. ..++++.+.++|+|||++++....
T Consensus 257 --~~fD~Vi~dpP~~-~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 257 --VKGNRVIMNLPKF-AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp --CCEEEEEECCTTT-GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --CCCcEEEECCcHh-HHHHHHHHHHHcCCCCEEEEEEee
Confidence 4799999987533 347888899999999998876554
No 175
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.43 E-value=5.8e-13 Score=109.51 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=89.6
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCC
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYH 99 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 99 (192)
+.+|||||||+|..+..+++..| ..+++++|+ +.+++.+++++...++.++++++.+|..+..+.. .
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----------~ 246 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE-----------G 246 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-----------T
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-----------C
Confidence 78999999999999999999987 689999999 8899999999999888889999999986542111 5
Q ss_pred CcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 100 GTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 100 ~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
++||+|++.... .....+++.+.+.|+|||.+++.+....
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 579999987642 1246789999999999999988776544
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.43 E-value=7.2e-13 Score=109.28 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=84.7
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|..+.. +
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~--------- 113 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L--------- 113 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C---------
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--C---------
Confidence 346789999999999999998875 3 57999999996 88999999999999889999999987641 1
Q ss_pred cCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 97 KYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 97 ~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|+.... .+...+.+..+.+.|+|||++++.
T Consensus 114 --~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 --PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp --SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred --CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 468999998754 244567788889999999999853
No 177
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.43 E-value=9.9e-13 Score=101.38 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=84.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC----CceEEEeCCchhHHHHHHhhhhc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA----HKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. .+++++.+|..+.. +
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~------ 97 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--F------ 97 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--S------
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--C------
Confidence 35679999999999999999986 569999999999999999998877662 46899999986531 1
Q ss_pred ccccCCCcccEEEEeCCC---cCcH---HHHHHHHhccCCCeEEEEeCc
Q 029536 94 TKEKYHGTFDFVFVDADK---DNYV---NYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~---~~~~---~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++.... .+.. .+++.+.+.|+|||.+++.+.
T Consensus 98 ----~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 98 ----HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp ----CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 26789999987652 2223 789999999999999988654
No 178
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=3e-13 Score=106.10 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=82.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++..++ ..+++++|+++.+++.++++ .++++++.+|..+.. .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~---------- 92 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P---------- 92 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c----------
Confidence 4567999999999999999998876 68999999999999999886 257999999986542 1
Q ss_pred CCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 98 YHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 98 ~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.++||+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 93 -~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 93 -AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp -SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 678999999765 3456788999999999999998854
No 179
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.42 E-value=4.7e-13 Score=105.58 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=82.4
Q ss_pred HHHHHHhHc-CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 10 FFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 10 ~l~~l~~~~-~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
++..+.... ++.+|||+|||+|..+..++.. ..+++++|+++.+++.|++++ .+++++.+|..+..
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~---- 106 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFS---- 106 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCC----
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCC----
Confidence 344444433 4589999999999999998876 468999999999999999864 37899999986541
Q ss_pred hhhhcccccCCCcccEEEEeC-CC------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDA-DK------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~-~~------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++.. .. .....+++.+.+.|+|||.++++..
T Consensus 107 ---------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 107 ---------LGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp ---------CSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred ---------ccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 157899999976 31 2445678999999999999999754
No 180
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.42 E-value=6.7e-13 Score=108.43 Aligned_cols=106 Identities=18% Similarity=0.088 Sum_probs=88.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.+++++..+|..+. +
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~----------- 232 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---L----------- 232 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C-----------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---C-----------
Confidence 357999999999999999999887 789999999 999999999999999888999999998532 1
Q ss_pred CCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccCCc
Q 029536 99 HGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWGG 140 (192)
Q Consensus 99 ~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~~g 140 (192)
+.+||+|++.... .....+++++.+.|+|||.+++.+.....
T Consensus 233 p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 233 PAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp CCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred CCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 3389999987542 12467899999999999999887776543
No 181
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.42 E-value=9.1e-13 Score=102.31 Aligned_cols=108 Identities=12% Similarity=0.207 Sum_probs=84.8
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
.+..++...++.+|||+|||+|..+..++.. + ..+++++|+++.+++.++++... .+++++.+|..+.. +
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C--
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C--
Confidence 3444444456789999999999999999876 2 24999999999999999886532 47999999986541 1
Q ss_pred hhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 104 --------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 --------PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp --------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 2578999998765 3356788999999999999998854
No 182
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.41 E-value=1.2e-12 Score=108.69 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=88.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..+++..| +.+++++|+ +.+++.|++++...++.+++++..+|..+. +
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~---------- 265 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---I---------- 265 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---C----------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---C----------
Confidence 3468999999999999999999987 789999999 999999999999999888999999998632 1
Q ss_pred CCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 98 YHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 98 ~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+.+||+|++.... .....+++++.+.|+|||.+++.+....
T Consensus 266 -p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 266 -PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp -CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred -CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 3389999987642 1223689999999999999998776554
No 183
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.41 E-value=1.4e-12 Score=101.91 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=82.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++... .+++++.+|..+. + +
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~---------- 154 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T-L---------- 154 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C-C----------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C-C----------
Confidence 356899999999999999988764 468999999999999999987543 5799999998653 1 1
Q ss_pred CCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++.... .....+++.+.+.|+|||++++.+.
T Consensus 155 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 155 PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 25789999987652 2356788999999999999988664
No 184
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=5.7e-13 Score=105.29 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 6 ~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
...+.+...+...++.+|||||||+|..+..++. + +.+|+++|+++.+++.+++.. +++++.+|..+. +
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~-~ 89 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--Q-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL-A 89 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--T-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC-C
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--C-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC-C
Confidence 3344444444445778999999999999999996 3 689999999998887766532 799999998653 1
Q ss_pred HHHhhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+ ..++||+|++... ..+...+++.+.+.|| ||.+++.+.
T Consensus 90 -~----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 90 -L----------PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp -S----------CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred -C----------CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 1 2579999998875 3566889999999999 996666544
No 185
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.41 E-value=1e-12 Score=101.98 Aligned_cols=107 Identities=20% Similarity=0.254 Sum_probs=84.2
Q ss_pred HHHHHHHhHc-CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 9 QFFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 9 ~~l~~l~~~~-~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
.++..+.... +..+|||+|||+|..+..++.. .+++++|+++.+++.|++++...+ .+++++.+|..+.. .
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~ 93 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--L 93 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC--C
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC--C
Confidence 3445555544 3579999999999999988765 689999999999999999988765 47999999986541 1
Q ss_pred HhhhhcccccCCCcccEEEEeCC-------CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDAD-------KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++..+ ......+++.+.+.|+|||.++++
T Consensus 94 -----------~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 -----------PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp -----------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 478999998652 133467888999999999999883
No 186
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=1.1e-12 Score=106.26 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=76.8
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC-----ceEEEeCCchh--HHHHHHhhhh
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-----KIDFREGPALP--LLDQLIQDVS 92 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-----~v~~~~~d~~~--~~~~~~~~~~ 92 (192)
+.+|||||||+|..+..++.. . ..+|+|+|+|+.+++.|++.....+... ++++.+.|... +...+..
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~-~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~--- 123 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG-E-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE--- 123 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT---
T ss_pred CCeEEEEecCCcHhHHHHHhc-C-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc---
Confidence 579999999999755555543 2 4789999999999999999887765421 26677777621 1011110
Q ss_pred cccccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 93 STKEKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....++||+|++... ..+...+++.+.+.|||||++++...
T Consensus 124 ---~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 124 ---VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp ---TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 012579999987643 23557899999999999999988544
No 187
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=7.2e-13 Score=105.54 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=81.9
Q ss_pred HhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 15 ~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
+...++.+|||||||+|..+..++. + +.+++++|+++.+++.+++++ +++++..+|..+. + +
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~------- 114 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-V------- 114 (279)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-C-------
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-c-------
Confidence 3445678999999999999999998 3 689999999999999998764 5788999998653 1 1
Q ss_pred cccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.++||+|++... ..+...+++.+.+.|+|||.+++...
T Consensus 115 ----~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 115 ----DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp ----SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 578999998765 24567889999999999999988543
No 188
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.41 E-value=6.2e-13 Score=98.07 Aligned_cols=100 Identities=11% Similarity=0.026 Sum_probs=81.9
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...++.+|||+|||+|..+..++... .+++++|+++.+++.++++ .++++++.+| .. +
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~~----~-------- 71 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-KE----I-------- 71 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-GG----S--------
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-CC----C--------
Confidence 44566799999999999999999764 4999999999999999987 3589999988 11 1
Q ss_pred ccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 96 EKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 96 ~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 72 --~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 72 --PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp --CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred --CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 2678999998865 33567889999999999999998776544
No 189
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=2.1e-13 Score=109.81 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=84.1
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC--CceEEEeCCchhHHHHHHhhhhcccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA--HKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
++.+|||||||+|..+..++.. +.+|+++|+++.+++.|++++...+.. .+++++++|..++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~------------ 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA------------ 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC------------
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC------------
Confidence 3459999999999999999976 468999999999999999999876642 58999999987641
Q ss_pred cCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 97 KYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 97 ~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
..++||+|++... ......+++.+.+.|+|||.+++.....
T Consensus 147 -~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 147 -LDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp -CSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -cCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 1578999987532 1235788999999999999999865543
No 190
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=108.76 Aligned_cols=104 Identities=14% Similarity=0.245 Sum_probs=83.8
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...+.++|||||||+|..+.+.|++. ..+|++||.++ +++.|+++++..++.+++++++++..++ .+
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~l-------- 146 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV--EL-------- 146 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC--CC--------
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee--cC--------
Confidence 45688999999999999998877763 46899999986 8899999999999999999999998765 12
Q ss_pred ccCCCcccEEEEeCC------CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~------~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
++++|+|+.... ......++....++|+|||+++.+-
T Consensus 147 ---pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 147 ---PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp ---SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred ---CccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 678999986432 2244566666679999999997543
No 191
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=1.6e-12 Score=101.36 Aligned_cols=106 Identities=12% Similarity=0.026 Sum_probs=81.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.+..+|||+|||+|..+..++...+ +|+++|+++.+++.+++++. ..+++++++|..+......-.
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~------- 120 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIH------- 120 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHH-------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccc-------
Confidence 3457899999999999999998754 79999999999999998762 248999999987643221000
Q ss_pred CCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 98 YHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 98 ~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
....||+|++... ......+++.+.+.|+|||.+++.+..
T Consensus 121 ~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 0235999998865 224578999999999999987776543
No 192
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.40 E-value=4.5e-13 Score=104.14 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=79.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCC-chhHHHH---HHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDIT-KEHYEKG---LPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~-~~~~~~a---~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
.++.+|||||||+|..+..++...+ +.+|+++|++ +.+++.| +++..+.++ ++++++.+|+.++ +..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l-~~~------ 93 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESL-PFE------ 93 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBC-CGG------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHh-hhh------
Confidence 3567999999999999999997655 7899999999 5555555 777777776 4899999998765 211
Q ss_pred ccccCCCcccEEEEeCCC--------cCcHHHHHHHHhccCCCeEEEE
Q 029536 94 TKEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~--------~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
..+.+|.|++.... ..+..+++.+.+.|||||.+++
T Consensus 94 ----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 94 ----LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ----GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred ----ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 13567777776542 1245688999999999999988
No 193
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.39 E-value=5.8e-13 Score=101.65 Aligned_cols=103 Identities=20% Similarity=0.145 Sum_probs=81.4
Q ss_pred HHHHHh-HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 11 FSMLLK-LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 11 l~~l~~-~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
+..++. ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ ++++..+|..+..
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~----- 98 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD----- 98 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-----
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-----
Confidence 344443 345679999999999999999976 568999999999999999876 4667788876542
Q ss_pred hhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 90 DVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++.... .....+++.+.+.|+|||.+++...
T Consensus 99 --------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 99 --------AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp --------CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 16899999987652 2456789999999999999988643
No 194
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=1.8e-13 Score=106.01 Aligned_cols=101 Identities=18% Similarity=0.090 Sum_probs=79.9
Q ss_pred HHHHHHHh--HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 9 QFFSMLLK--LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 9 ~~l~~l~~--~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
.++..++. ..++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++ .++++++++|..+.++
T Consensus 36 ~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~- 105 (226)
T 3m33_A 36 LTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELP- 105 (226)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCC-
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccC-
Confidence 34444443 345789999999999999999987 57999999999999999987 2579999999854332
Q ss_pred HHhhhhcccccC-CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 87 LIQDVSSTKEKY-HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 87 ~~~~~~~~~~~~-~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
.. .++||+|++.. ....+++.+.+.|||||.++
T Consensus 106 ----------~~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 ----------AGLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ----------TTCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred ----------CcCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 12 56899999974 34566778889999999998
No 195
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.39 E-value=2.8e-12 Score=104.50 Aligned_cols=106 Identities=17% Similarity=0.205 Sum_probs=88.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++...| +.+++++|++ .+++.|++++...++.++++++.+|..+. .+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~---------- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY---------- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC----------
Confidence 4568999999999999999999886 6899999999 99999999999988877899999998653 11
Q ss_pred CCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
...||+|++.... .....+++.+.+.|+|||.+++.+...
T Consensus 230 -~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 230 -GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp -CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred -CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 3459999986542 234678999999999999887766554
No 196
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.39 E-value=4.2e-12 Score=107.45 Aligned_cols=112 Identities=17% Similarity=0.141 Sum_probs=87.4
Q ss_pred CCHHHHH-HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 3 TSPDEAQ-FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 3 ~~~~~~~-~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
.++...+ ++..+....+..+|||+|||+|..++.++.. ..+|+++|+++.+++.|+++++..++. ++++.+|+.
T Consensus 273 ~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~ 347 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDR 347 (425)
T ss_dssp SBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTT
T ss_pred cCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChH
Confidence 4444444 3444444556789999999999999999975 468999999999999999999988884 999999987
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCCcCcH-HHHHHHHhccCCCeEEEEe
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYV-NYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~-~~~~~~~~~L~~gG~lv~~ 134 (192)
+.+ ..+||+|++|++..... .+++.+ ..|+|+|++++.
T Consensus 348 ~~~--------------~~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 348 EVS--------------VKGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp TCC--------------CTTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred HcC--------------ccCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 652 23799999998854443 355555 458999998874
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.39 E-value=9.9e-13 Score=109.41 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=83.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++++|||+| |+|..++.++...+ ..+|+++|+++.+++.|+++++..++. +++++.+|..+.++.. .
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~----------~ 238 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY----------A 238 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT----------T
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh----------c
Confidence 478999999 99999999988754 579999999999999999999999886 8999999987633210 1
Q ss_pred CCcccEEEEeCCC--cCcHHHHHHHHhccCCCe-EEEE
Q 029536 99 HGTFDFVFVDADK--DNYVNYHKRLIELVKVGG-VIGY 133 (192)
Q Consensus 99 ~~~~D~v~id~~~--~~~~~~~~~~~~~L~~gG-~lv~ 133 (192)
.++||+|++|.+. .....+++.+.+.|+||| ++++
T Consensus 239 ~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 239 LHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp SSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEE
T ss_pred cCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEE
Confidence 4689999999762 224678889999999999 4344
No 198
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.39 E-value=4.8e-12 Score=104.45 Aligned_cols=105 Identities=13% Similarity=0.024 Sum_probs=87.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|..+. .
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~----------- 253 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--S----------- 253 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--C-----------
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--C-----------
Confidence 4567999999999999999999887 789999999 999999999999988878899999998654 1
Q ss_pred CCCcccEEEEeCCC---c--CcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDADK---D--NYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
...+|+|++.... . ....+++.+.+.|+|||.+++.+...
T Consensus 254 -~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 254 -YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp -CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred -CCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 1234999987652 1 25678999999999999997766544
No 199
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.39 E-value=4.1e-12 Score=105.55 Aligned_cols=128 Identities=14% Similarity=0.067 Sum_probs=88.3
Q ss_pred CCCHHHHHH-HHHHHhHc--CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeC
Q 029536 2 MTSPDEAQF-FSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG 78 (192)
Q Consensus 2 ~~~~~~~~~-l~~l~~~~--~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 78 (192)
|.++...+. +..+.... ++.+|||+|||+|..++.+|.. ..+|+++|+++.+++.|++|++..++ ++++++.+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~ 268 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRM 268 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECC
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEEC
Confidence 445555443 34444433 3578999999999999998874 46899999999999999999999888 58999999
Q ss_pred CchhHHHHHHhhhh----cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 79 PALPLLDQLIQDVS----STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 79 d~~~~~~~~~~~~~----~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
|+.+.++.+...-. .+.+....+||+|++|++..... +.+.+.|+++|.|++..+
T Consensus 269 d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~---~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 269 AAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLD---SETEKMVQAYPRILYISC 327 (369)
T ss_dssp CSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCCC---HHHHHHHTTSSEEEEEES
T ss_pred CHHHHHHHHhhccccccccccccccCCCCEEEECcCccccH---HHHHHHHhCCCEEEEEEC
Confidence 99888765421000 00000013799999998754322 234455567887776543
No 200
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=1.5e-12 Score=96.75 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch
Q 029536 4 SPDEAQFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (192)
Q Consensus 4 ~~~~~~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 81 (192)
.++...++.. +.. .++.+|||+|||+|..+..++.. . +++++|+++.+++. ..+++++++|..
T Consensus 7 ~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~ 71 (170)
T 3q87_B 7 GEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADLL 71 (170)
T ss_dssp CHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECSTT
T ss_pred CccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECChh
Confidence 4566666666 444 67789999999999999999875 3 89999999999876 367899999986
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCCc------------CcHHHHHHHHhccCCCeEEEEeC
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADKD------------NYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+.++ .++||+|+++.+.. ....+++.+.+.+ |||.+++..
T Consensus 72 ~~~~-------------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 72 CSIN-------------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTBC-------------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred hhcc-------------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 6321 46899999986522 2356778888888 999888743
No 201
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.39 E-value=3e-12 Score=98.24 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=77.6
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHH----HHHcCCCCceEEEeCCchhHHHHHHhhhh
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPI----IQKAGVAHKIDFREGPALPLLDQLIQDVS 92 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 92 (192)
..++.+|||+|||+|..+..++...| +.+|+++|+++.+++.+.+. ....+. ++++++++|..+. +.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l-~~------ 95 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERL-PP------ 95 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTC-CS------
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhC-CC------
Confidence 45667999999999999999999876 78999999999988754333 233444 5899999998763 21
Q ss_pred cccccCCCcccEEEEeCCC--------cCcHHHHHHHHhccCCCeEEEEe
Q 029536 93 STKEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..+. |.|++.... .+...+++.+.+.|||||.+++.
T Consensus 96 -----~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 96 -----LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp -----CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred -----CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 1345 777755431 22367889999999999999884
No 202
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=1.4e-11 Score=93.66 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHh---HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 4 SPDEAQFFSMLLK---LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 4 ~~~~~~~l~~l~~---~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
++.....+...+. ..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...++ +++++++|.
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 106 (207)
T 1wy7_A 31 PGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDV 106 (207)
T ss_dssp CHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCG
T ss_pred chHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECch
Confidence 3444444444443 235689999999999999999876 2 35899999999999999999988776 799999998
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEE
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.++ +++||+|+++++. .....+++.+.+.+ |+++++
T Consensus 107 ~~~---------------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 107 SEF---------------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp GGC---------------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred HHc---------------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 763 3589999999862 23457788888877 665554
No 203
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.38 E-value=3e-12 Score=99.41 Aligned_cols=108 Identities=13% Similarity=0.198 Sum_probs=85.1
Q ss_pred HHHHHHhH-cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 10 FFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 10 ~l~~l~~~-~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
++..+... .++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ...+++++.+|..+. + +
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~-~-~- 112 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSL-P-F- 112 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBC-S-S-
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcC-C-C-
Confidence 34444443 35679999999999999999986 568999999999999888764 236899999998654 1 1
Q ss_pred hhhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++...
T Consensus 113 ---------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 113 ---------ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp ---------CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 2679999998765 34556889999999999999988653
No 204
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.38 E-value=1.5e-12 Score=107.75 Aligned_cols=103 Identities=18% Similarity=0.198 Sum_probs=86.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..++...+ +.+++++|+ +.+++.|++++...++.++++++.+|..+. +
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~---------- 245 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---L---------- 245 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---C----------
Confidence 3567999999999999999999886 789999999 999999999999988878999999998642 1
Q ss_pred CCCcccEEEEeCCCc-----CcHHHHHHHHhccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+..||+|++..... ....+++.+.+.|+|||.+++.+.
T Consensus 246 -~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 -PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 33599999876521 224789999999999998887665
No 205
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.37 E-value=2.5e-12 Score=106.05 Aligned_cols=104 Identities=18% Similarity=0.205 Sum_probs=86.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..++...+ +.+++++|+ +.+++.|++++...++.++++++.+|..+. +
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~---------- 246 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---L---------- 246 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---C----------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---C----------
Confidence 3567999999999999999999876 689999999 999999999999988878999999998642 1
Q ss_pred CCCcccEEEEeCCCc-----CcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 98 YHGTFDFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 98 ~~~~~D~v~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
+..||+|++..... ....+++.+.+.|+|||.+++.+..
T Consensus 247 -~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 -PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 33599999876521 2247899999999999988876655
No 206
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.37 E-value=7.2e-12 Score=100.33 Aligned_cols=120 Identities=16% Similarity=0.039 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeC-CchhHHHHHHHH-----HHcCCC----Cc
Q 029536 6 DEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDI-TKEHYEKGLPII-----QKAGVA----HK 72 (192)
Q Consensus 6 ~~~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~-~~~~~~~a~~~~-----~~~~~~----~~ 72 (192)
+...+...+... .++++|||+|||+|..++.++.. . ..+|+++|+ ++.+++.+++++ +..++. ++
T Consensus 63 ~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~ 140 (281)
T 3bzb_A 63 GARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRAS 140 (281)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CC
T ss_pred HHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCC
Confidence 344455555443 46789999999999999988875 2 359999999 899999999999 555554 47
Q ss_pred eEEEeCCchhHHHHHHhhhhcccccCCCcccEEEE-eCC--CcCcHHHHHHHHhccC---C--CeEEEE
Q 029536 73 IDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFV-DAD--KDNYVNYHKRLIELVK---V--GGVIGY 133 (192)
Q Consensus 73 v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~i-d~~--~~~~~~~~~~~~~~L~---~--gG~lv~ 133 (192)
+++...+..+....+... ...++||+|++ |.. ......+++.+.++|+ | ||.+++
T Consensus 141 v~~~~~~~~~~~~~~~~~------~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 141 PKVVPYRWGDSPDSLQRC------TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp CEEEECCTTSCTHHHHHH------HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred eEEEEecCCCccHHHHhh------ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 888865533221111100 01578999987 433 3446788999999999 9 997654
No 207
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.37 E-value=2.2e-12 Score=110.72 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=83.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|..+. .+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~--~~---------- 221 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL---------- 221 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC----------
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC--cc----------
Confidence 46789999999999999988874 3 57999999998 9999999999999988999999998764 11
Q ss_pred CCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEE
Q 029536 98 YHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 98 ~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.++||+|+.... .+...+.+..+.+.|+|||++++
T Consensus 222 -~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 222 -PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp -SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred -CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999998754 23445667777899999999984
No 208
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.37 E-value=1.2e-12 Score=107.80 Aligned_cols=100 Identities=14% Similarity=0.201 Sum_probs=82.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
..+.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...++. ++++.+|..+..
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~------------- 258 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV------------- 258 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-------------
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-------------
Confidence 3467999999999999999998865 579999999999999999999987764 677888875431
Q ss_pred CCCcccEEEEeCCCc--------CcHHHHHHHHhccCCCeEEEEe
Q 029536 98 YHGTFDFVFVDADKD--------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 98 ~~~~~D~v~id~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|+++.... ....+++.+.+.|+|||.+++.
T Consensus 259 -~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 259 -KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp -CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred -cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 56899999986522 2367888999999999988874
No 209
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.37 E-value=1.9e-12 Score=105.73 Aligned_cols=103 Identities=12% Similarity=0.043 Sum_probs=86.7
Q ss_pred CEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCC
Q 029536 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHG 100 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 100 (192)
.+|||+|||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|..+. + ++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~-----------~~ 232 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V-----------PS 232 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C-----------CS
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C-----------CC
Confidence 7999999999999999999887 689999999 999999999988877778999999998652 2 45
Q ss_pred cccEEEEeCCCc-----CcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 101 TFDFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 101 ~~D~v~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+||+|++..... ....+++.+.+.|+|||.+++.+....
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 799999876522 234788999999999999988776543
No 210
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=2.9e-12 Score=106.62 Aligned_cols=114 Identities=20% Similarity=0.241 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.+.....|..++ ..++.+|||+|||+|..++.++...+ .++++++|+++.+++.|++++..+++.+++++.++|+.+.
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 455556666666 66778999999999999999998754 4689999999999999999999999988999999999775
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEE
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv 132 (192)
. . ..++||+|+++++.. -|..+++.+.+.| +|+.++
T Consensus 281 ~--~----------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~ 327 (373)
T 3tm4_A 281 S--Q----------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVF 327 (373)
T ss_dssp G--G----------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred C--c----------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEE
Confidence 2 1 157899999987621 1356677777877 444443
No 211
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.37 E-value=2e-12 Score=98.52 Aligned_cols=96 Identities=15% Similarity=0.161 Sum_probs=77.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..+ + ..+++++|+++.+++.+++++ .+++++.+|..+. + + .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~----------~ 92 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F----------P 92 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S----------C
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C----------C
Confidence 6789999999999988766 2 238999999999999998875 5788999987653 1 1 2
Q ss_pred CCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 99 HGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 99 ~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.++||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 578999998865 335678999999999999999886543
No 212
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.36 E-value=6.9e-12 Score=93.70 Aligned_cols=104 Identities=9% Similarity=0.034 Sum_probs=81.7
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..+ ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++++.+|..+. + +
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~-~-~- 103 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVD-Q-I- 103 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTS-C-C-
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccC-C-C-
Confidence 455554 346789999999999999999976 468999999999999998865 3588999988653 1 1
Q ss_pred hhhhcccccCCCcccEEEEeCC-C-----cCcHHHHHHHHhccCCCeEEEEeC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD-K-----DNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~-~-----~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|++.+. . .....+++.+.+.|+|||.+++..
T Consensus 104 ---------~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 104 ---------SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp ---------CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2578999999743 1 234678899999999999998854
No 213
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.36 E-value=1.1e-11 Score=99.14 Aligned_cols=114 Identities=10% Similarity=0.003 Sum_probs=83.4
Q ss_pred CCCEEEEEccch---hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhh-hhcc
Q 029536 19 NAKNTMEIGVFT---GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQD-VSST 94 (192)
Q Consensus 19 ~~~~ileiG~g~---G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~~ 94 (192)
...+|||||||+ |..+..+++..+ +.+|+++|++|.+++.|++.+.. .++++++.+|..+....+... ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~- 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRR- 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHH-
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhc-
Confidence 357999999999 988776666655 68999999999999999998743 368999999986532110000 000
Q ss_pred cccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 95 KEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
.....+||+|++... ......+++.+.+.|+|||++++.+...
T Consensus 152 -~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 152 -MIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp -HCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred -cCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 001258999987653 1236789999999999999999987654
No 214
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.35 E-value=2e-12 Score=102.63 Aligned_cols=100 Identities=14% Similarity=0.191 Sum_probs=72.8
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh-HHHHHHhhhhcc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP-LLDQLIQDVSST 94 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~~~ 94 (192)
...++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++... .+.....+... .....
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~------- 107 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKEL------- 107 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGG-------
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccccc-------
Confidence 4456789999999999999999975 578999999999999999987543 22222222211 00111
Q ss_pred cccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEe
Q 029536 95 KEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|+++... ......+..+.++| |||.+++.
T Consensus 108 ----~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 108 ----AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp ----TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ----CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 5689999998652 23455788888999 99999875
No 215
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.35 E-value=7.7e-12 Score=106.04 Aligned_cols=115 Identities=12% Similarity=0.123 Sum_probs=89.3
Q ss_pred HHHHHHHHHhH---cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 7 EAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 7 ~~~~l~~l~~~---~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
...++..++.. .+..+|||+|||+|..++.++.. ..+|+++|+++.+++.|+++++..++. +++|+.+|+.+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~ 346 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSC
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHH
Confidence 44455555443 34579999999999999999976 579999999999999999999998884 899999999775
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
++.+.. ..++||+|++|++.....+.++.+. .++|++++.+.
T Consensus 347 l~~~~~--------~~~~fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 347 VTKQPW--------AKNGFDKVLLDPARAGAAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp CSSSGG--------GTTCCSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEE
T ss_pred hhhhhh--------hcCCCCEEEECCCCccHHHHHHHHH-hcCCCeEEEEE
Confidence 432110 1468999999998665566666554 47899988763
No 216
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.35 E-value=2.4e-12 Score=94.53 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=74.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH--HHHHhhhhccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL--DQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~~~ 95 (192)
.++.+|||+|||+|..+..+++.++++.+++++|+++ +++. .+++++.+|..+.. +.+...
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~----- 83 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLER----- 83 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHH-----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhcc-----
Confidence 4567999999999999999998864368999999999 6432 57999999986541 111100
Q ss_pred ccCCCcccEEEEeCCCc---Cc-----------HHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKD---NY-----------VNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~---~~-----------~~~~~~~~~~L~~gG~lv~~d 135 (192)
...++||+|+++.... .. ..+++.+.+.|+|||.+++..
T Consensus 84 -~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 84 -VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp -HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 0157899999976521 12 578889999999999998754
No 217
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.34 E-value=5.1e-12 Score=102.33 Aligned_cols=107 Identities=14% Similarity=0.087 Sum_probs=82.0
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC------CCCceEEEeCCchhHH--HHHHhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG------VAHKIDFREGPALPLL--DQLIQD 90 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~--~~~~~~ 90 (192)
++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...+ ...+++++++|..+.. +.+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-- 109 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR-- 109 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS--
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc--
Confidence 6789999999999999998874 3 6799999999999999999887642 2357999999986541 0111
Q ss_pred hhcccccCCCcccEEEEeCCC-------cCcHHHHHHHHhccCCCeEEEEeC
Q 029536 91 VSSTKEKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
...++||+|++.... .....+++.+.+.|+|||++++..
T Consensus 110 ------~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 110 ------DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp ------STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ------cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 013589999987642 123578899999999999998753
No 218
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.34 E-value=4.3e-12 Score=98.19 Aligned_cols=98 Identities=13% Similarity=0.147 Sum_probs=79.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++... .+++++|+++.+++.+++++ ++++++.+|..+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~------------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFR------------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCC-------------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcc-------------
Confidence 456899999999999999999874 38999999999999998864 46899999986531
Q ss_pred CCCcccEEEEeCC----C---cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 98 YHGTFDFVFVDAD----K---DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 98 ~~~~~D~v~id~~----~---~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++... . .....+++.+.+.|+|||.++++...
T Consensus 97 ~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 97 LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 1568999995432 1 34467889999999999999997654
No 219
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.34 E-value=6.1e-12 Score=100.98 Aligned_cols=108 Identities=12% Similarity=0.103 Sum_probs=76.4
Q ss_pred CCCEEEEEccchhHHHHHHHH----hCCCCcE--EEEEeCCchhHHHHHHHHHHc-CCCCceE--EEeCCchhHHHHHHh
Q 029536 19 NAKNTMEIGVFTGYSLLATAL----AIPDDGK--ILALDITKEHYEKGLPIIQKA-GVAHKID--FREGPALPLLDQLIQ 89 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~----~~~~~~~--v~~vD~~~~~~~~a~~~~~~~-~~~~~v~--~~~~d~~~~~~~~~~ 89 (192)
++.+|||||||+|..+..++. ..+ ..+ ++++|+|+++++.|++.+... ++ ++++ +..++..++......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 346899999999987765433 333 454 499999999999999988754 33 4454 456666544321100
Q ss_pred hhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
++.+++||+|++... ..+....++.+.+.|||||.+++.
T Consensus 130 ------~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 ------KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp ------TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ------ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 112578999998765 445678999999999999999875
No 220
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.33 E-value=3.5e-12 Score=96.95 Aligned_cols=110 Identities=10% Similarity=0.041 Sum_probs=84.1
Q ss_pred HHHHHHhH-cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 10 FFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 10 ~l~~l~~~-~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
+...+... .++.+|||+|||+|..+..++...+ .+++++|+++.+++.+++++.. .++++++.+|..+. .+
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~--~~- 103 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL--DF- 103 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC--CS-
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC--CC-
Confidence 34444433 4567999999999999999998743 3899999999999999998753 25899999998654 11
Q ss_pred hhhhcccccCCCcccEEEEeCCC------------------cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDADK------------------DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~~------------------~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..++||+|++.... .....+++.+.+.|+|||.+++...
T Consensus 104 ---------~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 104 ---------PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp ---------CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ---------CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 25789999976431 1336788899999999999987543
No 221
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=1.7e-11 Score=92.81 Aligned_cols=106 Identities=13% Similarity=0.181 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHHh---HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 4 SPDEAQFFSMLLK---LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 4 ~~~~~~~l~~l~~---~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
++.....+..++. ..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++. +++++++|.
T Consensus 33 ~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~ 104 (200)
T 1ne2_A 33 DASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVADV 104 (200)
T ss_dssp CHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECCG
T ss_pred CHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECcH
Confidence 3444444444443 236689999999999999999876 3 4689999999999999998764 789999998
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEe
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++ +++||+|+++++. .....+++.+.+.+ |+++++.
T Consensus 105 ~~~---------------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 105 SEI---------------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp GGC---------------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred HHC---------------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 763 4689999999762 22356788888877 6655554
No 222
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=8.5e-12 Score=98.39 Aligned_cols=95 Identities=19% Similarity=0.128 Sum_probs=76.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++.. .+ ++.+|..+. + + .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~-~-~----------~ 111 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDL-P-F----------P 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSC-C-S----------C
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHC-C-C----------C
Confidence 6789999999999999999875 4689999999999999988653 12 778887553 1 1 2
Q ss_pred CCcccEEEEeCC----CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 99 HGTFDFVFVDAD----KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 99 ~~~~D~v~id~~----~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.++||+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 112 ~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 578999998653 2447889999999999999998753
No 223
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.32 E-value=6.2e-11 Score=93.60 Aligned_cols=149 Identities=11% Similarity=0.017 Sum_probs=102.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHh------CCCCcEEEEEe-----CCch-------------------hHHHHHHH----
Q 029536 18 INAKNTMEIGVFTGYSLLATALA------IPDDGKILALD-----ITKE-------------------HYEKGLPI---- 63 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~------~~~~~~v~~vD-----~~~~-------------------~~~~a~~~---- 63 (192)
.-|..|+|+|+..|.++..++.. ...+.+++++| +.+. ..+..++.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34679999999999999997753 12357899999 3321 01112222
Q ss_pred --HHHcCC-CCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC-cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 64 --IQKAGV-AHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK-DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 64 --~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~-~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
++..+. .++++++.|++.+.++.+.++ ....+||+|++|++. ..+...++.+.++|+|||+|++||+.+.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~------~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~ 221 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAE------NPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNP 221 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHH------CTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCT
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHh------CCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCC
Confidence 223555 489999999999999886533 113479999999985 5567789999999999999999997432
Q ss_pred ccccCCCCCCchhhhhhHHHHHHHHHHHhhcCCCeeEEEeecCCeeEEEE
Q 029536 140 GSVVAPPDADLDEHFLYLRDFVQELNKALAVDPRIEICQISIADGVTLCR 189 (192)
Q Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~ 189 (192)
+ + ....+++ +....+.......+|+..+...++
T Consensus 222 ~------w-------~G~~~A~----~ef~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 222 K------W-------PGENIAM----RKVLGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp T------C-------THHHHHH----HHHTCTTSSCCEECTTCSCCEEEE
T ss_pred C------C-------hHHHHHH----HHHHhhCCCeEEEccCCCCCEEEE
Confidence 1 1 1222333 333445667888888887765543
No 224
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.30 E-value=2e-11 Score=96.51 Aligned_cols=95 Identities=21% Similarity=0.226 Sum_probs=76.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++..++ +.+++++|+++.+++.|+++. .++.+..+|..+. + +
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~---------- 144 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F---------- 144 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C----------
Confidence 3568999999999999999998875 679999999999999998764 4688999987643 1 1
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|+..... ..++.+.+.|+|||.+++..
T Consensus 145 ~~~~fD~v~~~~~~----~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 145 SDTSMDAIIRIYAP----CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp CTTCEEEEEEESCC----CCHHHHHHHEEEEEEEEEEE
T ss_pred CCCceeEEEEeCCh----hhHHHHHHhcCCCcEEEEEE
Confidence 25789999976543 24778889999999988754
No 225
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.30 E-value=1.7e-12 Score=101.97 Aligned_cols=110 Identities=16% Similarity=0.073 Sum_probs=81.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC----------------------------
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV---------------------------- 69 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------------------- 69 (192)
.++.+|||+|||+|..+..++.... .+|+++|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3457999999999999888876532 4899999999999999988765321
Q ss_pred CCce-EEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------CcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 70 AHKI-DFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 70 ~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++ +++.+|..+..+.. +...++||+|++..... .+..+++.+.++|+|||.+++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~--------~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG--------GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT--------TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCC--------ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0127 89999886542211 00127899999876522 4667889999999999999987644
No 226
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.28 E-value=8.9e-12 Score=101.28 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=88.8
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
..++..++...++.+|||+|||+|+.+..++..++..++|+++|+++.+++.+++++++.++ .+++++++|+.+.....
T Consensus 91 s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 91 SCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSD 169 (309)
T ss_dssp GGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCccc
Confidence 34555556666778999999999999999998765468999999999999999999999998 57999999987653211
Q ss_pred HhhhhcccccCCCcccEEEEeCCC-------c--C----------c--------HHHHHHHHhccCCCeEEEEeCc
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDADK-------D--N----------Y--------VNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~~-------~--~----------~--------~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
. ...+||.|++|++. . + . .++++.+.++++ ||.|++.-+
T Consensus 170 ~---------~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 170 P---------RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp G---------GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred c---------ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 0 02579999998651 0 0 0 135666767776 898886543
No 227
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.26 E-value=1e-12 Score=104.16 Aligned_cols=109 Identities=18% Similarity=0.038 Sum_probs=75.9
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC----------------------------
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA---------------------------- 70 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---------------------------- 70 (192)
++.+|||||||+|..+..++... ..+|+++|+|+.+++.|+++++.....
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 55789999999997666554331 247999999999999999887653210
Q ss_pred CceE-EEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCC-------CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 71 HKID-FREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDAD-------KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 71 ~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.+++ ++++|..+..+.. ....++||+|+.... ..++...++++.++|||||.+++.+..
T Consensus 133 ~~i~~~~~~D~~~~~~~~--------~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLA--------PAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHEEEEEECCTTSSSTTT--------TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheEEeccccCCCCCC--------ccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1233 7777765421100 001468999998754 134567888999999999999998654
No 228
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.25 E-value=2e-11 Score=100.32 Aligned_cols=115 Identities=13% Similarity=0.048 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHh----HcCCCEEEEEccchhHHHHHHHHhCCCC----cEEEEEeCCchhHHHHHHHHHHcCCCCceEEE
Q 029536 5 PDEAQFFSMLLK----LINAKNTMEIGVFTGYSLLATALAIPDD----GKILALDITKEHYEKGLPIIQKAGVAHKIDFR 76 (192)
Q Consensus 5 ~~~~~~l~~l~~----~~~~~~ileiG~g~G~~~~~la~~~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 76 (192)
.....++..++. ..++.+|||+|||+|..+..+++.++.. .+++++|+++.+++.|+.++...+. +++++
T Consensus 112 ~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~ 189 (344)
T 2f8l_A 112 DSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLL 189 (344)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEE
Confidence 344455555543 2245799999999999999998876532 7899999999999999999988877 68899
Q ss_pred eCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcC---------------------cHHHHHHHHhccCCCeEEEEe
Q 029536 77 EGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN---------------------YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 77 ~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~---------------------~~~~~~~~~~~L~~gG~lv~~ 134 (192)
++|+.... ...+||+|+.+++... +..+++.+.+.|+|||.+++.
T Consensus 190 ~~D~l~~~-------------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 190 HQDGLANL-------------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp ESCTTSCC-------------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ECCCCCcc-------------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 99976421 1468999999976211 125788999999999987763
No 229
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.25 E-value=1.5e-11 Score=101.78 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=86.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC---C----CCceEEEeCCchhHHHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG---V----AHKIDFREGPALPLLDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~----~~~v~~~~~d~~~~~~~~~~~ 90 (192)
.+|++||-||.|.|..++.++++ + ..+++.||++|..++.+++++.... + .++++++.+|+..++.+...+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 46899999999999999999986 4 4799999999999999999874321 1 256999999999999876544
Q ss_pred hhcccccCCCcccEEEEeCCC-------------cCcHHHHHHHHhccCCCeEEEEe
Q 029536 91 VSSTKEKYHGTFDFVFVDADK-------------DNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~-------------~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
.++||+|++|... ....++++.+.+.|+|||+++..
T Consensus 282 --------~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 --------GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp --------TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred --------cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 6789999999531 01257888999999999999863
No 230
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.24 E-value=3.4e-11 Score=92.46 Aligned_cols=101 Identities=20% Similarity=0.186 Sum_probs=79.0
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
.+..+....++.+|||+|||+|..+..++.. +++|+++.+++.++++ +++++.+|..+. + +
T Consensus 38 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~-- 98 (219)
T 1vlm_A 38 ELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L-- 98 (219)
T ss_dssp HHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S--
T ss_pred HHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C--
Confidence 3445555566889999999999998877632 9999999999988875 578888887553 1 1
Q ss_pred hhhcccccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 99 --------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 --------KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp --------CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 2568999998865 345678999999999999999986543
No 231
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.24 E-value=2.3e-11 Score=96.40 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=79.6
Q ss_pred CCCEEEEEccchhHHHHHHHHh-------CCC----CcEEEEEeCCc--------------hhHHHHHHHHHHcC-----
Q 029536 19 NAKNTMEIGVFTGYSLLATALA-------IPD----DGKILALDITK--------------EHYEKGLPIIQKAG----- 68 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~-------~~~----~~~v~~vD~~~--------------~~~~~a~~~~~~~~----- 68 (192)
++.+|||||+|+|++++.++.. .|. ..+++++|..| +..+.|+++++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999999998765 342 25899999987 44456777776521
Q ss_pred -----CC---CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cC----cHHHHHHHHhccCCCeEEEE
Q 029536 69 -----VA---HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DN----YVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 69 -----~~---~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~----~~~~~~~~~~~L~~gG~lv~ 133 (192)
+. .+++++.+|+.+.++.+... ...+||+||+|+.. .+ +.++|+.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~-------~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDS-------LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGG-------GTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccc-------cCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 21 36789999998887765210 01379999999852 12 57899999999999999983
No 232
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=4.5e-11 Score=90.29 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=70.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCC-CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH------------
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL------------ 84 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------ 84 (192)
.+..+|||+|||+|..+..++...+. .++|+++|+++.. .. ++++++++|..+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 34579999999999999999988763 5899999999842 12 57889999876531
Q ss_pred -------HHHHhhhhcccccCCCcccEEEEeCCCcC-------c-------HHHHHHHHhccCCCeEEEEe
Q 029536 85 -------DQLIQDVSSTKEKYHGTFDFVFVDADKDN-------Y-------VNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 85 -------~~~~~~~~~~~~~~~~~~D~v~id~~~~~-------~-------~~~~~~~~~~L~~gG~lv~~ 134 (192)
+.+... ...++||+|+++..... . ...++.+.+.|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~------~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEI------LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHH------HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhh------cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 111000 01468999999864221 1 12677788999999999874
No 233
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.23 E-value=9.3e-12 Score=99.63 Aligned_cols=111 Identities=11% Similarity=-0.031 Sum_probs=74.5
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC-----------------CC-----------
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG-----------------VA----------- 70 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----------------~~----------- 70 (192)
++.+|||||||+|..+..++.. + ..+|+++|+++.+++.|++++.+.. ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 5689999999999944333322 2 5699999999999999988664321 00
Q ss_pred -CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC-------cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 71 -HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 71 -~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++++.+|..+.++. ... ....++||+|++.... ..+..+++.+.+.|||||.+++.+.+
T Consensus 149 ~~~~~~~~~D~~~~~~~-~~~-----~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPL-GAG-----SPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHEEEEECCCTTSSSTT-CSS-----CSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCc-ccc-----ccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 0145666676542210 000 0114579999987651 14677899999999999999986543
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.23 E-value=5.9e-11 Score=95.27 Aligned_cols=90 Identities=18% Similarity=0.095 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+...+.+...+...++.+|||||||+|..+..++.. ..+|+++|+++.+++.+++++...+..++++++++|+.+.
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~- 89 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT- 89 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS-
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc-
Confidence 333333333344456689999999999999999987 4689999999999999999987766656899999998654
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCC
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADK 111 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~ 111 (192)
. ...||+|+.+.+.
T Consensus 90 -~------------~~~fD~vv~nlpy 103 (285)
T 1zq9_A 90 -D------------LPFFDTCVANLPY 103 (285)
T ss_dssp -C------------CCCCSEEEEECCG
T ss_pred -c------------chhhcEEEEecCc
Confidence 1 2479999998763
No 235
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.22 E-value=4.6e-12 Score=98.92 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=67.1
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++++|||||||+|..+..+++. + ..+|+++|+++.+++.++++. .++.........+...- ...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~------~~~~~~~~~~~~~~~~~--------~~~ 100 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSD------ERVVVMEQFNFRNAVLA--------DFE 100 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTC------TTEEEECSCCGGGCCGG--------GCC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhC------ccccccccceEEEeCHh--------HcC
Confidence 4579999999999999999986 2 359999999999999877643 23333222111111100 001
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
...||.+.+|........+++.+.+.|||||.+++
T Consensus 101 ~~~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 101 QGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp SCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred cCCCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEE
Confidence 12356666666544557889999999999998887
No 236
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=4.9e-11 Score=90.34 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=69.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~ 95 (192)
.++.+|||+|||+|.++..+++. .++|+++|+++.. .. ++++++++|..+. ...+.....
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~--- 85 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALR--- 85 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHH---
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhh---
Confidence 35689999999999999999876 6899999999852 12 5799999997542 111110000
Q ss_pred ccCCCcccEEEEeCCCcC--------------cHHHHHHHHhccCCCeEEEEe
Q 029536 96 EKYHGTFDFVFVDADKDN--------------YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~--------------~~~~~~~~~~~L~~gG~lv~~ 134 (192)
....++||+|+.|..+.. ....++.+.+.|||||.+++.
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 000148999999875211 134667778999999999864
No 237
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.22 E-value=9.1e-11 Score=93.52 Aligned_cols=114 Identities=16% Similarity=0.149 Sum_probs=78.6
Q ss_pred cCCCEEEEEccch--hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGVFT--GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~g~--G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
....++||||||+ +..+..++....++++|+++|.||.+++.|++.+...+ ..+++++++|..+....+...
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~----- 150 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAP----- 150 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCH-----
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhccc-----
Confidence 3557999999997 44455555543337999999999999999999886543 257999999987653211000
Q ss_pred ccCCCccc-----EEEEeCC----CcC--cHHHHHHHHhccCCCeEEEEeCccC
Q 029536 96 EKYHGTFD-----FVFVDAD----KDN--YVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 96 ~~~~~~~D-----~v~id~~----~~~--~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
...+.|| .|++.+. ... ....+..+.+.|+|||+|++.+...
T Consensus 151 -~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 151 -ELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp -HHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred -ccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 0013344 4566554 121 3678999999999999999876543
No 238
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.21 E-value=1.3e-11 Score=94.62 Aligned_cols=97 Identities=15% Similarity=0.062 Sum_probs=76.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. .+++.+|..+....+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~---------- 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY---------- 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS----------
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC----------
Confidence 36789999999999999999876 379999999999998888643 367888876431111
Q ss_pred CCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 98 YHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 98 ~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 90 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 2578999998765 2345788999999999999998864
No 239
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.21 E-value=1.4e-11 Score=103.60 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=73.1
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||||||+|..+..++.. +.+++++|+++.+++.|++. +......++..+..+.++. .
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~---~-------- 168 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR---T-------- 168 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH---H--------
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc---C--------
Confidence 4679999999999999999875 46999999999999988874 3322222222222122221 1
Q ss_pred CCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 99 HGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 99 ~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+++||+|++... ..+...+++.+.+.|||||++++..
T Consensus 169 ~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 169 EGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 579999998866 3456789999999999999999864
No 240
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.20 E-value=1.6e-11 Score=97.31 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=73.8
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCc-------hhHHHHHHHHHHcCCCCceEEEeCCc
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITK-------EHYEKGLPIIQKAGVAHKIDFREGPA 80 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~-------~~~~~a~~~~~~~~~~~~v~~~~~d~ 80 (192)
..++...+...+..+|||+|||+|..++.++.. +++|+++|+++ ++++.|+++++..++..+++++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 344555445455689999999999999999985 56899999999 99999999888777766799999999
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCC
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
.++++.+... .++||+|++|+.
T Consensus 149 ~~~l~~~~~~--------~~~fD~V~~dP~ 170 (258)
T 2r6z_A 149 AEQMPALVKT--------QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHHHHHH--------HCCCSEEEECCC
T ss_pred HHHHHhhhcc--------CCCccEEEECCC
Confidence 9887765321 168999999975
No 241
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.19 E-value=7.6e-12 Score=100.67 Aligned_cols=98 Identities=15% Similarity=0.034 Sum_probs=71.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEe-CCchhHHH-HHHhhhhcccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE-GPALPLLD-QLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~-~~~~~~~~~~~ 96 (192)
++++|||+|||+|..+..++.. + ..+|+++|+++.+++.+.+. .+++.... .+...... .+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l--------- 147 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDF--------- 147 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGC---------
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhhC---------
Confidence 4579999999999999999876 2 57999999999999875431 13444433 23322111 11
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
...+||+|++|....+....+..+.+.|+|||.+++-
T Consensus 148 -~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 148 -TEGLPSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -TTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred -CCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 1335999999887666788899999999999988774
No 242
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.17 E-value=1.5e-10 Score=87.05 Aligned_cols=100 Identities=10% Similarity=0.108 Sum_probs=71.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCC--------cEEEEEeCCchhHHHHHHHHHHcCCCCceEEE-eCCchhHHH--H
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDD--------GKILALDITKEHYEKGLPIIQKAGVAHKIDFR-EGPALPLLD--Q 86 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~--------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~~--~ 86 (192)
.++.+|||+|||+|..+..+++..+.. ++++++|+++.. .. .+++++ .+|...... .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 356799999999999999999987632 799999999842 12 468888 888654311 1
Q ss_pred HHhhhhcccccCCCcccEEEEeCCCc---C----c-------HHHHHHHHhccCCCeEEEEeC
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADKD---N----Y-------VNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~~---~----~-------~~~~~~~~~~L~~gG~lv~~d 135 (192)
.... ...++||+|+++.... + . ...++.+.+.|+|||.+++..
T Consensus 89 ~~~~------~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEV------LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHH------SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHh------cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1100 0135899999876321 1 1 367888899999999999864
No 243
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.17 E-value=2.8e-11 Score=99.56 Aligned_cols=102 Identities=16% Similarity=0.060 Sum_probs=78.3
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||||||+|..+..+++..| +.+++++|+ +..+. ++.++..+..++++++.+|..+. +
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~---~----------- 245 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE---V----------- 245 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC---C-----------
T ss_pred CCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC---C-----------
Confidence 467999999999999999999887 789999999 44444 33333445567899999998521 1
Q ss_pred CCcccEEEEeCCC---c--CcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 99 HGTFDFVFVDADK---D--NYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 99 ~~~~D~v~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+ +||+|++.... . ....+++++.+.|||||.+++.+....
T Consensus 246 p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 246 P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 4 89999987642 2 225789999999999999988776544
No 244
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.16 E-value=1.7e-10 Score=91.01 Aligned_cols=143 Identities=10% Similarity=-0.049 Sum_probs=97.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
..|.+|||||||.|-.++.++...+ ..+|+++|+++.+++.+++++...|+. .++.+.|.....
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~------------- 194 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR------------- 194 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC-------------
T ss_pred CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC-------------
Confidence 4588999999999999988877654 799999999999999999999998874 777888764321
Q ss_pred CCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCc--cCCccccCCCCCCchhhhhhHHHHHHHHHHHhhc
Q 029536 98 YHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNT--LWGGSVVAPPDADLDEHFLYLRDFVQELNKALAV 170 (192)
Q Consensus 98 ~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (192)
..++||++++.-. .+.....+ .+++.|+++|++|--++ +-+... .+...-.+.++....
T Consensus 195 p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~-------------gm~~~Y~~~~e~~~~ 260 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSK-------------GMFQNYSQSFESQAR 260 (281)
T ss_dssp CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC--------------------CHHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCc-------------chhhHHHHHHHHHHH
Confidence 2789999987543 11222344 68899999999997665 221111 122222222233223
Q ss_pred CCCeeEEEeecCCeeEEEEE
Q 029536 171 DPRIEICQISIADGVTLCRR 190 (192)
Q Consensus 171 ~~~~~~~~~p~~~G~~i~~k 190 (192)
+.+.....+.+++-+..+.+
T Consensus 261 ~~g~~~~~~~~~nEl~y~i~ 280 (281)
T 3lcv_B 261 ERSCRIQRLEIGNELIYVIQ 280 (281)
T ss_dssp HHTCCEEEEEETTEEEEEEC
T ss_pred hcCCceeeeeecCeeEEEec
Confidence 34456666777777666554
No 245
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.15 E-value=1.9e-10 Score=92.99 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=67.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
++...+.+...+...++.+|||||||+|..+..++.. ..+|+++|+++.+++.+++++...+. ++++++.+|+.+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 3444444444445556789999999999999999865 57999999999999999999987776 6899999998654
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCCc
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADKD 112 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~~ 112 (192)
. ..+||+|+++.+..
T Consensus 103 ~--------------~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 103 V--------------FPKFDVCTANIPYK 117 (299)
T ss_dssp C--------------CCCCSEEEEECCGG
T ss_pred C--------------cccCCEEEEcCCcc
Confidence 1 34899999987643
No 246
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.15 E-value=2.3e-10 Score=94.90 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=76.6
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||||||+|..+..+++..| +.+++++|+ |.+++.+++ .++++++.+|..+. +
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~---~----------- 259 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFDG---V----------- 259 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTC---C-----------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCCC---C-----------
Confidence 357999999999999999999987 789999999 888776653 25899999998642 2
Q ss_pred CCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 99 HGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 99 ~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+.. |+|++.... .....+++++.+.|+|||.+++.+....
T Consensus 260 p~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 260 PKG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp CCC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred CCC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 223 999987542 2234688999999999999988776644
No 247
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.14 E-value=7.7e-11 Score=98.94 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=67.9
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHc--CCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+.+|||+|||+|..++.+++. ..+|+++|+++.+++.|++|++.. ++ ++++++++|+.++++...
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~--------- 160 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK--------- 160 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH---------
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc---------
Confidence 689999999999999998875 579999999999999999999988 77 789999999988766542
Q ss_pred CCCcccEEEEeCC
Q 029536 98 YHGTFDFVFVDAD 110 (192)
Q Consensus 98 ~~~~~D~v~id~~ 110 (192)
.++||+||+|++
T Consensus 161 -~~~fDvV~lDPP 172 (410)
T 3ll7_A 161 -TFHPDYIYVDPA 172 (410)
T ss_dssp -HHCCSEEEECCE
T ss_pred -CCCceEEEECCC
Confidence 358999999975
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.14 E-value=8.6e-11 Score=89.74 Aligned_cols=95 Identities=9% Similarity=0.052 Sum_probs=72.5
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 88 (192)
.++..+....++.+|||+|||+|..+..++ .+++++|+++. +++++.+|..+. + +
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~-~- 111 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P-L- 111 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-C-
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-C-
Confidence 455655555567899999999999887662 57999999987 456788887652 1 1
Q ss_pred hhhhcccccCCCcccEEEEeCC--CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~--~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 112 ---------~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 112 ---------EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp ---------CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ---------CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 2578999998765 345678899999999999999986543
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.12 E-value=9.5e-11 Score=98.33 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.+...+++..++...++.+|||+|||+|..+..+++..+...+++++|+++.+++.| .+++++++|..+.
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLW 93 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhc
Confidence 344445555554434567999999999999999998753368999999999998766 4789999998764
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCCC---cC-----------------------------cHHHHHHHHhccCCCeEE
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDADK---DN-----------------------------YVNYHKRLIELVKVGGVI 131 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~~---~~-----------------------------~~~~~~~~~~~L~~gG~l 131 (192)
. ..++||+|+.+++. .. +..+++.+.++|+|||.+
T Consensus 94 ~-------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~ 160 (421)
T 2ih2_A 94 E-------------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVL 160 (421)
T ss_dssp C-------------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEE
T ss_pred C-------------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEE
Confidence 2 14689999997651 10 125678889999999977
Q ss_pred EE
Q 029536 132 GY 133 (192)
Q Consensus 132 v~ 133 (192)
++
T Consensus 161 ~~ 162 (421)
T 2ih2_A 161 VF 162 (421)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 250
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.12 E-value=2.2e-09 Score=83.81 Aligned_cols=149 Identities=9% Similarity=0.009 Sum_probs=96.6
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHh
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 89 (192)
|...+.....|.+|||||||+|-.+..+. + ..+++++|+++.+++.+++++...+ .+.++...|.....
T Consensus 96 fY~~i~~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~----- 164 (253)
T 3frh_A 96 LYDFIFSAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAP----- 164 (253)
T ss_dssp HHHHHTSSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSC-----
T ss_pred HHHHHhcCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCC-----
Confidence 33333344568999999999999888766 3 7899999999999999999988776 47888888875431
Q ss_pred hhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCc--cCCccccCCCCCCchhhhhhHHHHHH
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNT--LWGGSVVAPPDADLDEHFLYLRDFVQ 162 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~--~~~g~~~~~~~~~~~~~~~~~~~~~~ 162 (192)
..++||+|++--. .+.....+ .++..|++++++|--++ +-+....+..+ .-.
T Consensus 165 --------~~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~------------Y~~ 223 (253)
T 3frh_A 165 --------PAEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEAN------------YAA 223 (253)
T ss_dssp --------CCCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------C------------HHH
T ss_pred --------CCCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhH------------HHH
Confidence 2679999987632 11122333 67789999999987663 22211111111 112
Q ss_pred HHHHHhhcCCCeeEEEeecCCeeEEEEEc
Q 029536 163 ELNKALAVDPRIEICQISIADGVTLCRRI 191 (192)
Q Consensus 163 ~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 191 (192)
+|.+.+ .........+.+++-+..+.|+
T Consensus 224 ~~e~~~-~~~~~~~~~~~~~nEl~~~i~~ 251 (253)
T 3frh_A 224 WFEGGL-PAEFEIEDKKTIGTELIYLIKK 251 (253)
T ss_dssp HHHHHS-CTTEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHh-hccchhhhheecCceEEEEEec
Confidence 333334 3444555566788887776665
No 251
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.11 E-value=9.8e-11 Score=93.59 Aligned_cols=105 Identities=25% Similarity=0.262 Sum_probs=74.4
Q ss_pred CCCEEEEEccchhH----HHHHHHHhCCC---CcEEEEEeCCchhHHHHHHHHH--------------H---------cC
Q 029536 19 NAKNTMEIGVFTGY----SLLATALAIPD---DGKILALDITKEHYEKGLPIIQ--------------K---------AG 68 (192)
Q Consensus 19 ~~~~ileiG~g~G~----~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~--------------~---------~~ 68 (192)
++.+|+|+|||+|. .+..++..++. +.+|+++|+|+++++.|++..- + .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 44445555332 3589999999999999998641 0 00
Q ss_pred -------CCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEe
Q 029536 69 -------VAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 69 -------~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
+..+++|.++|..+. .+. ..++||+|++-.. ......+++.+.+.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~---------~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYN---------VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCC---------CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCC---------cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013688999987552 110 1368999998643 123367889999999999999974
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.10 E-value=2.2e-10 Score=100.24 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=78.5
Q ss_pred HcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 17 ~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
..+|.+|||||||.|..+..||+. +++|+|||.++..++.|+....+.+. -++++.++++.++....
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~--------- 130 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAAL--------- 130 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHC---------
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhc---------
Confidence 346789999999999999999986 67999999999999999999887764 37999999998876543
Q ss_pred cCCCcccEEEEeCCCcCcH-----HHHHHHHhccCCCeEE
Q 029536 97 KYHGTFDFVFVDADKDNYV-----NYHKRLIELVKVGGVI 131 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~-----~~~~~~~~~L~~gG~l 131 (192)
.+++||+|++-...++.. ..+..+...|++++..
T Consensus 131 -~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~ 169 (569)
T 4azs_A 131 -EEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQA 169 (569)
T ss_dssp -CTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSE
T ss_pred -cCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccce
Confidence 257899999876633322 2233455667777643
No 253
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.10 E-value=4.8e-10 Score=92.49 Aligned_cols=104 Identities=19% Similarity=0.115 Sum_probs=82.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.+..+|+|||||+|..+..+++..| +.+++..|. |..++.|++++...+ .++++++.+|..+. .
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~--~----------- 241 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKD--P----------- 241 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS--C-----------
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccC--C-----------
Confidence 3457999999999999999999988 788999998 889999998876544 58999999997542 1
Q ss_pred CCCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 98 YHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
...+|++++.... +....+++++.+.|+|||.+++.|...
T Consensus 242 -~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 242 -LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp -CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred -CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 3467999986541 223568999999999999887766654
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.09 E-value=3e-10 Score=95.14 Aligned_cols=110 Identities=14% Similarity=0.051 Sum_probs=80.0
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCC---C----------------------------------CcEEEEEeC
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIP---D----------------------------------DGKILALDI 52 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~---~----------------------------------~~~v~~vD~ 52 (192)
.|-.++...+...+||.+||+|..++..|.... + ..+++++|+
T Consensus 192 ~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDi 271 (393)
T 3k0b_A 192 ALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDI 271 (393)
T ss_dssp HHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEES
T ss_pred HHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEEC
Confidence 333344445567899999999999888775432 1 156999999
Q ss_pred CchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------CcHHHHHHHHhcc
Q 029536 53 TKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------NYVNYHKRLIELV 125 (192)
Q Consensus 53 ~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~L 125 (192)
++.+++.|++|+..+++.+++++.++|..+... ..+||+|+++++.. ....++..+.+.|
T Consensus 272 d~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~l 338 (393)
T 3k0b_A 272 DARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVY 338 (393)
T ss_dssp CHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHH
Confidence 999999999999999998889999999876521 45899999998732 2233444444444
Q ss_pred CC--CeEEE
Q 029536 126 KV--GGVIG 132 (192)
Q Consensus 126 ~~--gG~lv 132 (192)
++ ||.+.
T Consensus 339 k~~~g~~~~ 347 (393)
T 3k0b_A 339 KRMPTWSVY 347 (393)
T ss_dssp HTCTTCEEE
T ss_pred hcCCCCEEE
Confidence 44 66443
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.09 E-value=1.5e-09 Score=87.46 Aligned_cols=87 Identities=18% Similarity=0.116 Sum_probs=67.5
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
.+...+..+|||||||+|..+..++.. ..+|+++|+++++++.+++++... ++++++++|+.++- +
T Consensus 45 ~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~--~------ 110 (295)
T 3gru_A 45 SANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVD--L------ 110 (295)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSC--G------
T ss_pred hcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCC--c------
Confidence 334455679999999999999999987 478999999999999999998732 58999999997641 1
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHH
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYH 118 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~ 118 (192)
...+||.|+.+.+..-....+
T Consensus 111 ----~~~~fD~Iv~NlPy~is~pil 131 (295)
T 3gru_A 111 ----NKLDFNKVVANLPYQISSPIT 131 (295)
T ss_dssp ----GGSCCSEEEEECCGGGHHHHH
T ss_pred ----ccCCccEEEEeCcccccHHHH
Confidence 145799999887643333333
No 256
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.08 E-value=7.8e-10 Score=89.45 Aligned_cols=84 Identities=13% Similarity=0.028 Sum_probs=68.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+|||+|||+|..+..++..++ +++|+++|+++.+++.|+++++..+ .+++++++|..++...+...
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~------- 94 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTL------- 94 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHT-------
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhc-------
Confidence 3567999999999999999999887 7899999999999999999998876 58999999987653323210
Q ss_pred CCCcccEEEEeCCC
Q 029536 98 YHGTFDFVFVDADK 111 (192)
Q Consensus 98 ~~~~~D~v~id~~~ 111 (192)
...+||.|++|...
T Consensus 95 g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 95 GIEKVDGILMDLGV 108 (301)
T ss_dssp TCSCEEEEEEECSC
T ss_pred CCCCCCEEEEcCcc
Confidence 02589999999863
No 257
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.08 E-value=1.4e-10 Score=96.03 Aligned_cols=97 Identities=11% Similarity=0.089 Sum_probs=77.0
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||||||+|..+..+++..| +.+++++|+ |.+++.|++ .++++++.+|..+. +
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~~---~----------- 257 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFKE---V----------- 257 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTC---C-----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCCC---C-----------
Confidence 457999999999999999999987 789999999 887776653 26899999998652 1
Q ss_pred CCcccEEEEeCCC-----cCcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 99 HGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 99 ~~~~D~v~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
+.. |+|++.... .....+++++.+.|+|||.+++.+...+
T Consensus 258 p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 258 PSG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp CCC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 223 999986542 2345789999999999999988776643
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=2.2e-10 Score=95.68 Aligned_cols=104 Identities=18% Similarity=0.144 Sum_probs=78.0
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCC-------------------------------------CCcEEEEEeCCchhHH
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIP-------------------------------------DDGKILALDITKEHYE 58 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~-------------------------------------~~~~v~~vD~~~~~~~ 58 (192)
...+...+||.+||+|..++.+|.... ...+|+++|+++.+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 334567899999999999998876532 1157999999999999
Q ss_pred HHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------CcHHHHHHHHhccCC--Ce
Q 029536 59 KGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------NYVNYHKRLIELVKV--GG 129 (192)
Q Consensus 59 ~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~L~~--gG 129 (192)
.|++|+..+++.+++++.++|..++.. ..+||+|+++++.. ....++..+.+.|++ |+
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~ 338 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQFKS-------------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNW 338 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGGCCC-------------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSC
T ss_pred HHHHHHHHcCCCCceEEEECChhhcCc-------------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999998889999999876521 45899999998842 223345544455554 55
Q ss_pred EEE
Q 029536 130 VIG 132 (192)
Q Consensus 130 ~lv 132 (192)
.+.
T Consensus 339 ~~~ 341 (385)
T 3ldu_A 339 SYY 341 (385)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 259
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.07 E-value=1.4e-09 Score=89.85 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=91.6
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCC-----CceEEEeCCchh
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-----HKIDFREGPALP 82 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~ 82 (192)
..+...++...++.+|||++++.|+-|..++...+ ++.++++|+++..++..++++++.+.. .++.+...|+..
T Consensus 137 S~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~ 215 (359)
T 4fzv_A 137 SLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK 215 (359)
T ss_dssp GHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGG
T ss_pred HHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhh
Confidence 34455555666678999999999999999998765 678999999999999999999988753 478999999876
Q ss_pred HHHHHHhhhhcccccCCCcccEEEEeCCCcC---------------------------cHHHHHHHHhccCCCeEEEEeC
Q 029536 83 LLDQLIQDVSSTKEKYHGTFDFVFVDADKDN---------------------------YVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~---------------------------~~~~~~~~~~~L~~gG~lv~~d 135 (192)
+.+.. .+.||.|++|++-.. ..++++.+.++|||||.||+.-
T Consensus 216 ~~~~~-----------~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 216 WGELE-----------GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp HHHHS-----------TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhc-----------cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 54332 678999999976110 0256777889999999999654
Q ss_pred c
Q 029536 136 T 136 (192)
Q Consensus 136 ~ 136 (192)
+
T Consensus 285 C 285 (359)
T 4fzv_A 285 C 285 (359)
T ss_dssp S
T ss_pred C
Confidence 3
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.07 E-value=1.8e-10 Score=97.93 Aligned_cols=117 Identities=13% Similarity=0.062 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCC------------CCcEEEEEeCCchhHHHHHHHHHHcCCCC
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIP------------DDGKILALDITKEHYEKGLPIIQKAGVAH 71 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~ 71 (192)
++...++|..++...+..+|+|.|||+|..+..+++.+. ...+++|+|+++.+++.|+.++..+++..
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 345555666665555567999999999999998887641 13579999999999999999998888753
Q ss_pred -ceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcC--------------------cHHHHHHHHhccCCCeE
Q 029536 72 -KIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN--------------------YVNYHKRLIELVKVGGV 130 (192)
Q Consensus 72 -~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~--------------------~~~~~~~~~~~L~~gG~ 130 (192)
+++++++|+.... ...+||+|+.+++... ...++..+.+.|+|||.
T Consensus 236 ~~~~i~~gD~l~~~-------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~ 302 (445)
T 2okc_A 236 DRSPIVCEDSLEKE-------------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGR 302 (445)
T ss_dssp SCCSEEECCTTTSC-------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred CCCCEeeCCCCCCc-------------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCE
Confidence 6788999976531 1358999999876111 14788999999999997
Q ss_pred EEE
Q 029536 131 IGY 133 (192)
Q Consensus 131 lv~ 133 (192)
+++
T Consensus 303 ~a~ 305 (445)
T 2okc_A 303 AAV 305 (445)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 261
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.06 E-value=6.1e-10 Score=92.96 Aligned_cols=111 Identities=8% Similarity=-0.031 Sum_probs=81.5
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCC-------------------------------------CcEEEEEe
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-------------------------------------DGKILALD 51 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~-------------------------------------~~~v~~vD 51 (192)
..|-.++...+...++|.+||+|..++..|..... ..+++++|
T Consensus 184 aall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvD 263 (384)
T 3ldg_A 184 AAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFD 263 (384)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEE
T ss_pred HHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEE
Confidence 33334444455679999999999999887754321 15699999
Q ss_pred CCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------CcHHHHHHHHhc
Q 029536 52 ITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------NYVNYHKRLIEL 124 (192)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------~~~~~~~~~~~~ 124 (192)
+++.+++.|++|+..+++.+++++.++|..+... ..+||+|+++++.. ....++..+.+.
T Consensus 264 id~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~ 330 (384)
T 3ldg_A 264 FDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------------NKINGVLISNPPYGERLLDDKAVDILYNEMGET 330 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHH
Confidence 9999999999999999998889999999876521 45899999998731 234455555555
Q ss_pred cCC--CeEEE
Q 029536 125 VKV--GGVIG 132 (192)
Q Consensus 125 L~~--gG~lv 132 (192)
|++ |+.+.
T Consensus 331 lk~~~g~~~~ 340 (384)
T 3ldg_A 331 FAPLKTWSQF 340 (384)
T ss_dssp HTTCTTSEEE
T ss_pred HhhCCCcEEE
Confidence 555 66443
No 262
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.06 E-value=7.2e-11 Score=93.53 Aligned_cols=85 Identities=8% Similarity=0.067 Sum_probs=67.2
Q ss_pred HHHHhHcCC--CEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC--------CCCceEEEeCCch
Q 029536 12 SMLLKLINA--KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG--------VAHKIDFREGPAL 81 (192)
Q Consensus 12 ~~l~~~~~~--~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--------~~~~v~~~~~d~~ 81 (192)
...+...++ .+|||+|||+|..++++|.. +++|+++|+++...+.++++++... +..+++++++|..
T Consensus 79 ~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 79 AKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp HHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 334444455 79999999999999999986 4579999999998888888776442 2257999999998
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCC
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
++++.+ ..+||+|++|+.
T Consensus 156 ~~L~~~-----------~~~fDvV~lDP~ 173 (258)
T 2oyr_A 156 TALTDI-----------TPRPQVVYLDPM 173 (258)
T ss_dssp HHSTTC-----------SSCCSEEEECCC
T ss_pred HHHHhC-----------cccCCEEEEcCC
Confidence 876544 347999999986
No 263
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.03 E-value=5.9e-10 Score=92.41 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=76.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
++.+|||||||+|..+..+++..+ ..+++++|+ +.+++.+++ . ++++++.+|..+. +
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~----------- 265 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFAS---V----------- 265 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTTC---C-----------
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcccC---C-----------
Confidence 467999999999999999999887 689999999 888877664 1 4799999998642 2
Q ss_pred CCcccEEEEeCCC---cCc--HHHHHHHHhccCCCeEEEEeCccC
Q 029536 99 HGTFDFVFVDADK---DNY--VNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 99 ~~~~D~v~id~~~---~~~--~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
+. ||+|++.... .+. ..+++.+.+.|+|||.+++.+...
T Consensus 266 ~~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 266 PQ-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp CC-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CC-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 33 9999987652 222 378999999999999998876654
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.02 E-value=5.5e-10 Score=91.86 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=77.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ . ++++++.+|..+. +
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~---------- 244 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTS---I---------- 244 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTC---C----------
T ss_pred ccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccCC---C----------
Confidence 3568999999999999999999887 689999999 988887765 1 4599999998542 1
Q ss_pred CCCcccEEEEeCCC---cC--cHHHHHHHHhccCC---CeEEEEeCccC
Q 029536 98 YHGTFDFVFVDADK---DN--YVNYHKRLIELVKV---GGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~~---~~--~~~~~~~~~~~L~~---gG~lv~~d~~~ 138 (192)
+ .||+|++.... .+ ...+++++.+.|+| ||.+++.+...
T Consensus 245 -p-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 245 -P-NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp -C-CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred -C-CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 2 39999987652 22 23789999999999 99988877654
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.95 E-value=2.6e-09 Score=92.92 Aligned_cols=119 Identities=13% Similarity=0.048 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCC-----------------CcEEEEEeCCchhHHHHHHHHHH
Q 029536 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-----------------DGKILALDITKEHYEKGLPIIQK 66 (192)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~-----------------~~~v~~vD~~~~~~~~a~~~~~~ 66 (192)
++...++|..++...+..+|+|.+||+|..++.+++.+.. ..+++|+|+++.+++.|+.++..
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 3445556555555555679999999999999888765421 13799999999999999999988
Q ss_pred cCCCC----ceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcC-----------------cHHHHHHHHhcc
Q 029536 67 AGVAH----KIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN-----------------YVNYHKRLIELV 125 (192)
Q Consensus 67 ~~~~~----~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~-----------------~~~~~~~~~~~L 125 (192)
++... ++.++++|+...... ...+||+|+.+++... ...++..+.+.|
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~-----------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~L 302 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGE-----------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETL 302 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHH-----------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHE
T ss_pred hCCCccccccCCeEeCCCcccccc-----------cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHh
Confidence 88753 278999998654221 1568999999876211 236888999999
Q ss_pred CCCeEEEE
Q 029536 126 KVGGVIGY 133 (192)
Q Consensus 126 ~~gG~lv~ 133 (192)
+|||.+++
T Consensus 303 k~gGr~a~ 310 (541)
T 2ar0_A 303 HPGGRAAV 310 (541)
T ss_dssp EEEEEEEE
T ss_pred CCCCEEEE
Confidence 99997665
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.95 E-value=2.8e-09 Score=84.26 Aligned_cols=90 Identities=11% Similarity=0.018 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH-
Q 029536 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL- 83 (192)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 83 (192)
+...+-+-..+...+..+|||||||+|..|..++.. ..+|+++|+++++++.+++++.. .++++++++|+.++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFD 88 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCC
Confidence 334444444445556789999999999999999875 47899999999999999998864 36899999999775
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeCC
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
++.+. ..++|| |+.+.+
T Consensus 89 ~~~~~---------~~~~~~-vv~NlP 105 (255)
T 3tqs_A 89 FSSVK---------TDKPLR-VVGNLP 105 (255)
T ss_dssp GGGSC---------CSSCEE-EEEECC
T ss_pred HHHhc---------cCCCeE-EEecCC
Confidence 22210 135688 666665
No 267
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.92 E-value=3.2e-09 Score=87.49 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=76.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . ++++++.+|..+ .+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~~---------- 249 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK---SI---------- 249 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT---CC----------
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC---CC----------
Confidence 3568999999999999999999987 689999999 788776654 2 469999998864 11
Q ss_pred CCCcccEEEEeCC---CcC--cHHHHHHHHhccCC---CeEEEEeCccC
Q 029536 98 YHGTFDFVFVDAD---KDN--YVNYHKRLIELVKV---GGVIGYDNTLW 138 (192)
Q Consensus 98 ~~~~~D~v~id~~---~~~--~~~~~~~~~~~L~~---gG~lv~~d~~~ 138 (192)
+ .||+|++... ..+ ...+++++.+.|+| ||.+++.+...
T Consensus 250 -~-~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 250 -P-SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp -C-CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred -C-CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 2 5999998765 222 34789999999999 99888866654
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.90 E-value=1.1e-08 Score=81.59 Aligned_cols=90 Identities=11% Similarity=-0.028 Sum_probs=67.2
Q ss_pred HhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 15 ~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
+...+. +|||||||+|..|..++.. ..+|+++|+++++++.+++++. ..+++++++|+.++- +.
T Consensus 43 ~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~----~~~v~vi~~D~l~~~--~~------ 106 (271)
T 3fut_A 43 ARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS----GLPVRLVFQDALLYP--WE------ 106 (271)
T ss_dssp HCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT----TSSEEEEESCGGGSC--GG------
T ss_pred cCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC----CCCEEEEECChhhCC--hh------
Confidence 334455 9999999999999999986 3689999999999999998875 258999999997651 10
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHh
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIE 123 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~ 123 (192)
....+|.|+.+.+..--..++..+..
T Consensus 107 ---~~~~~~~iv~NlPy~iss~il~~ll~ 132 (271)
T 3fut_A 107 ---EVPQGSLLVANLPYHIATPLVTRLLK 132 (271)
T ss_dssp ---GSCTTEEEEEEECSSCCHHHHHHHHH
T ss_pred ---hccCccEEEecCcccccHHHHHHHhc
Confidence 01368999888775444444444443
No 269
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.88 E-value=4e-10 Score=90.13 Aligned_cols=98 Identities=7% Similarity=-0.078 Sum_probs=67.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHH-HHcCCCCceEEE--eCCchhHHHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPII-QKAGVAHKIDFR--EGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~~ 95 (192)
+..+|||+|||+|.++..++.. ++|+++|+++ +...+++.. .......+++++ .+|..++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l------------ 144 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM------------ 144 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC------------
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC------------
Confidence 4569999999999999998875 5799999998 433222110 000111278899 8888653
Q ss_pred ccCCCcccEEEEeCCC--cC-----c--HHHHHHHHhccCCCe--EEEEeC
Q 029536 96 EKYHGTFDFVFVDADK--DN-----Y--VNYHKRLIELVKVGG--VIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~--~~-----~--~~~~~~~~~~L~~gG--~lv~~d 135 (192)
.+++||+|++|... .+ . ...++.+.+.|+||| .+++..
T Consensus 145 --~~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 145 --EPFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp --CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred --CCCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 15689999998651 11 1 136778889999999 888743
No 270
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.88 E-value=3.2e-10 Score=90.17 Aligned_cols=98 Identities=9% Similarity=-0.033 Sum_probs=67.3
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHH-HHHcCCCCceEEE--eCCchhHHHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPI-IQKAGVAHKIDFR--EGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~~ 95 (192)
+..+|||+|||+|.++..++.. ++|+++|+++ +...+++. ........++.++ .+|..++
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l------------ 136 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL------------ 136 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS------------
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC------------
Confidence 4569999999999999998875 5799999998 43222211 0000011268888 8888653
Q ss_pred ccCCCcccEEEEeCCC--cCc-------HHHHHHHHhccCCCe--EEEEeC
Q 029536 96 EKYHGTFDFVFVDADK--DNY-------VNYHKRLIELVKVGG--VIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~--~~~-------~~~~~~~~~~L~~gG--~lv~~d 135 (192)
.+++||+|++|... .+. ...++.+.+.|+||| .+++..
T Consensus 137 --~~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 137 --PVERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp --CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred --CCCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 15689999998651 111 136778889999999 888853
No 271
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.87 E-value=2.2e-08 Score=78.41 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=51.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
.+..+|||||||+|..+..++.. ..+++++|+++++++.+++++.. .++++++++|+.+.
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVD---HDNFQVLNKDILQF 88 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTT---CCSEEEECCCGGGC
T ss_pred CCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhcc---CCCeEEEEChHHhC
Confidence 45679999999999999999987 37899999999999999998753 25899999998764
No 272
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.87 E-value=4.8e-09 Score=84.38 Aligned_cols=89 Identities=13% Similarity=0.164 Sum_probs=66.6
Q ss_pred cCCCEEEEEcc------chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEE-EeCCchhHHHHHHhh
Q 029536 18 INAKNTMEIGV------FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDF-REGPALPLLDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~------g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~~ 90 (192)
.+..+|||+|| |+|. ..++...++.++|+++|+++. + +++++ +++|..+.. +
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~--~--- 120 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVH--T--- 120 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCC--C---
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCC--c---
Confidence 45679999999 5576 445666665689999999998 1 36888 999986531 1
Q ss_pred hhcccccCCCcccEEEEeCCCc--------------CcHHHHHHHHhccCCCeEEEEeC
Q 029536 91 VSSTKEKYHGTFDFVFVDADKD--------------NYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~~~--------------~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.++||+|+.+.... .+...++.+.+.|||||.+++..
T Consensus 121 --------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 --------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp --------SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 46899999975311 12468888999999999999864
No 273
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.85 E-value=8.7e-10 Score=89.34 Aligned_cols=95 Identities=9% Similarity=0.029 Sum_probs=65.9
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeC----CchhHHHHHHHHHHcCCCCceEEEeC-CchhHHHHHHhhhhc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDI----TKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDVSS 93 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~----~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~ 93 (192)
+..+|||+|||+|.++..+++. ++|+++|+ ++..++.+. .+..+ .++++++.+ |..+.
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l---------- 144 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI---------- 144 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS----------
T ss_pred CCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC----------
Confidence 3479999999999999999875 47999999 453322110 01111 157899988 77543
Q ss_pred ccccCCCcccEEEEeCCCc--Cc-------HHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDADKD--NY-------VNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~--~~-------~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|++|.... +. ...+..+.+.|||||.+++.
T Consensus 145 ----~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 145 ----PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp ----CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ----CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 146899999986531 11 14677778999999999884
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.78 E-value=1.1e-08 Score=91.40 Aligned_cols=115 Identities=14% Similarity=0.122 Sum_probs=81.1
Q ss_pred HHHHHHHhHcCCCEEEEEccchhHHHHHHHHhC---C--------------------------------------CCcEE
Q 029536 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAI---P--------------------------------------DDGKI 47 (192)
Q Consensus 9 ~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~---~--------------------------------------~~~~v 47 (192)
..|-.++...+...+||.+||+|..++..|... + ...++
T Consensus 180 a~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i 259 (703)
T 3v97_A 180 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHF 259 (703)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccE
Confidence 333334444456789999999999998877542 1 12579
Q ss_pred EEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------CcHHHHHH
Q 029536 48 LALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------NYVNYHKR 120 (192)
Q Consensus 48 ~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------~~~~~~~~ 120 (192)
+++|+++.+++.|++|+..+|+.+.++|.++|+.++.+.. ..++||+|+.+++.. ...++++.
T Consensus 260 ~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~----------~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 260 YGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL----------PKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC----------TTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc----------ccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 9999999999999999999999888999999997642111 123899999998732 22333443
Q ss_pred H---HhccCCCeEEEE
Q 029536 121 L---IELVKVGGVIGY 133 (192)
Q Consensus 121 ~---~~~L~~gG~lv~ 133 (192)
+ .+.+.|||.+.+
T Consensus 330 l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 330 LGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHCTTCEEEE
T ss_pred HHHHHHhhCCCCeEEE
Confidence 3 344557885544
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.72 E-value=2.3e-08 Score=79.96 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=55.2
Q ss_pred HHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCC-CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 10 ~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
-+-..+...+..+|||||||+|..+..++...+. +++|+++|+++++++.++++. ..+++++++|+.++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 3333344456789999999999999999987542 355999999999999999883 36899999999765
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.72 E-value=6.8e-08 Score=75.98 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=67.4
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH-HHHHHhhhhcc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL-LDQLIQDVSST 94 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~ 94 (192)
...+..+|||||||+|..+..++.. + ..+++++|+++.+++.++++ + ..+++++++|+.++ ++..
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~~~~------- 93 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPFCSL------- 93 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCGGGS-------
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCChhHc-------
Confidence 3445679999999999999999876 2 57999999999999999876 1 35899999998765 1111
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhcc--CCCeEEEE
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELV--KVGGVIGY 133 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L--~~gG~lv~ 133 (192)
...+ .|+.+.+..-....+..+.+.. -+.+++++
T Consensus 94 ----~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~ 129 (249)
T 3ftd_A 94 ----GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMV 129 (249)
T ss_dssp ----CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEE
T ss_pred ----cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEE
Confidence 1233 5666666444444554444322 23445544
No 277
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.71 E-value=7.7e-10 Score=86.67 Aligned_cols=100 Identities=9% Similarity=0.113 Sum_probs=71.8
Q ss_pred hHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 16 ~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
...+..+|||+|||+|..+..++.. ..+++++|+++++++.+++++. ..++++++++|..+.. +.
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~--~~------- 90 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQ--FP------- 90 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTT--CC-------
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcC--cc-------
Confidence 3345679999999999999999987 3789999999999998887764 2368999999987641 10
Q ss_pred ccCCCcccEEEEeCCCcCc--------------HHHH----HHHHhccCCCeEEEE
Q 029536 96 EKYHGTFDFVFVDADKDNY--------------VNYH----KRLIELVKVGGVIGY 133 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~--------------~~~~----~~~~~~L~~gG~lv~ 133 (192)
..++| .|+.+.+.... ...+ +.+.++|+|||.+.+
T Consensus 91 --~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 91 --NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp --CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred --cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 02578 66776542211 1122 557788999997654
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.71 E-value=5.8e-08 Score=85.50 Aligned_cols=100 Identities=13% Similarity=-0.013 Sum_probs=76.2
Q ss_pred CCEEEEEccchhHHHHHHHHhC---CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAI---PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~---~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.+.|+|+|||+|-.....+++. ....+|++||.++ +...+++..+..++.++|+++++|..+. .+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev--~L--------- 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREW--VA--------- 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTC--CC---------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceec--cC---------
Confidence 3579999999998854444332 2224799999997 5678899999999999999999999876 22
Q ss_pred cCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
+++.|+|+.-.- .+...+.+....+.|||||+++=
T Consensus 426 --PEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 426 --PEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp --SSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred --CcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 679999975432 34445677777799999999863
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.70 E-value=7.7e-08 Score=83.57 Aligned_cols=121 Identities=13% Similarity=0.094 Sum_probs=92.4
Q ss_pred CCHHHHHHHHHHHhH----cCCCEEEEEccchhHHHHHHHHhCC--CCcEEEEEeCCchhHHHHHHHHHHcCCC-CceEE
Q 029536 3 TSPDEAQFFSMLLKL----INAKNTMEIGVFTGYSLLATALAIP--DDGKILALDITKEHYEKGLPIIQKAGVA-HKIDF 75 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~----~~~~~ileiG~g~G~~~~~la~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~ 75 (192)
++++..++|..++.. .+..+|+|-+||+|.....+++.+. ...+++|+|+++..++.|+.++..+++. +++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 456677777777763 3567999999999999998888763 2478999999999999999999988885 47899
Q ss_pred EeCCchhHH-HHHHhhhhcccccCCCcccEEEEeCCCc-----------C-----c----------HHHHHHHHhccC-C
Q 029536 76 REGPALPLL-DQLIQDVSSTKEKYHGTFDFVFVDADKD-----------N-----Y----------VNYHKRLIELVK-V 127 (192)
Q Consensus 76 ~~~d~~~~~-~~~~~~~~~~~~~~~~~~D~v~id~~~~-----------~-----~----------~~~~~~~~~~L~-~ 127 (192)
.++|....- +.. ...+||+|+.+++.. . + ..++..+.++|+ +
T Consensus 281 ~~gDtL~~d~p~~----------~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~ 350 (542)
T 3lkd_A 281 HNADTLDEDWPTQ----------EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQD 350 (542)
T ss_dssp EESCTTTSCSCCS----------SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTT
T ss_pred Eecceeccccccc----------ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCC
Confidence 999975430 111 156899999986610 0 1 237888999999 9
Q ss_pred CeEEEE
Q 029536 128 GGVIGY 133 (192)
Q Consensus 128 gG~lv~ 133 (192)
||.+.+
T Consensus 351 gGr~a~ 356 (542)
T 3lkd_A 351 NGVMAI 356 (542)
T ss_dssp TCEEEE
T ss_pred ceeEEE
Confidence 997644
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.69 E-value=1.2e-08 Score=88.61 Aligned_cols=119 Identities=8% Similarity=0.060 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCC--------------CcEEEEEeCCchhHHHHHHHHHHcC
Q 029536 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD--------------DGKILALDITKEHYEKGLPIIQKAG 68 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~--------------~~~v~~vD~~~~~~~~a~~~~~~~~ 68 (192)
+++...++|..++... +.+|+|.+||+|...+.++..+.. ..+++|+|+++..++.|+.++..++
T Consensus 229 TP~~Vv~lmv~ll~p~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPY-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCHHHHHHHHHHHCCC-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhcC-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 4456666666666543 348999999999988887654320 3589999999999999999999998
Q ss_pred CCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcC--------------------------------cHH
Q 029536 69 VAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN--------------------------------YVN 116 (192)
Q Consensus 69 ~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~--------------------------------~~~ 116 (192)
+..++.+.++|+.... .. ...+||+|+.+++... ...
T Consensus 308 i~~~i~i~~gDtL~~~-~~----------~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~ 376 (544)
T 3khk_A 308 IDFNFGKKNADSFLDD-QH----------PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFA 376 (544)
T ss_dssp CCCBCCSSSCCTTTSC-SC----------TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHH
T ss_pred CCcccceeccchhcCc-cc----------ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHH
Confidence 8766666888865321 11 1468999999876211 025
Q ss_pred HHHHHHhccCCCeEEEE
Q 029536 117 YHKRLIELVKVGGVIGY 133 (192)
Q Consensus 117 ~~~~~~~~L~~gG~lv~ 133 (192)
++..+.++|+|||.+++
T Consensus 377 Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 377 WMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp HHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHhccCceEEE
Confidence 78889999999997554
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.67 E-value=1.2e-07 Score=74.66 Aligned_cols=100 Identities=10% Similarity=0.007 Sum_probs=65.1
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH-HHH
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL-LDQ 86 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 86 (192)
.+.+-..+...+..+|||||||+|..|. ++. .+ ..+|+++|+++++++.+++++... ++++++++|+.++ ++.
T Consensus 10 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 10 IDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHH
T ss_pred HHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHH
Confidence 3333333444556789999999999999 654 22 234999999999999999876432 5899999999774 333
Q ss_pred HHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHH
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRL 121 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~ 121 (192)
.... .+..|.|+.+.+..-...++..+
T Consensus 84 ~~~~--------~~~~~~vvsNlPY~i~~~il~~l 110 (252)
T 1qyr_A 84 LAEK--------MGQPLRVFGNLPYNISTPLMFHL 110 (252)
T ss_dssp HHHH--------HTSCEEEEEECCTTTHHHHHHHH
T ss_pred hhcc--------cCCceEEEECCCCCccHHHHHHH
Confidence 2100 12346777776644334444333
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.62 E-value=1.9e-07 Score=82.59 Aligned_cols=106 Identities=7% Similarity=-0.134 Sum_probs=74.1
Q ss_pred CCEEEEEccchhHHHHHHHHhCC------------CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP------------DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
.+.|||+|||+|-.+...+.+.. ...+|++||.++.+....+... ..++.++|+++.+|..++-...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHH-hcCCCCeEEEEeCchhhccccc
Confidence 46899999999998754322211 1359999999997775555444 3788889999999998873211
Q ss_pred HhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEE
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
... ..++.|+|+.-.- .+-..+.+..+.+.|||||+++-
T Consensus 489 ~~~-------~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 489 KDR-------GFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHT-------TCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred ccC-------CCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 111 1578999986533 23345777777899999999863
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.61 E-value=4.2e-08 Score=78.17 Aligned_cols=111 Identities=13% Similarity=0.175 Sum_probs=85.7
Q ss_pred HHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHH
Q 029536 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (192)
Q Consensus 8 ~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 87 (192)
..++..+.. .++..+||+-+|+|..++.+++ + ..+++.+|.++...+..++|++. ..+++++..|+...+..+
T Consensus 81 ~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS--~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 81 LEYISVIKQ-INLNSTLSYYPGSPYFAINQLR--S-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp HHHHHHHHH-HSSSSSCCEEECHHHHHHHHSC--T-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHH-hcCCCceeEeCCcHHHHHHHcC--C-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHh
Confidence 345555544 5778899999999999998776 2 57999999999999999988864 468999999998887766
Q ss_pred HhhhhcccccCCCcccEEEEeCCCc---CcHHHHHHHH--hccCCCeEEEE
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDADKD---NYVNYHKRLI--ELVKVGGVIGY 133 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~~~---~~~~~~~~~~--~~L~~gG~lv~ 133 (192)
... ..+||+||+|++.+ .+.+.++.+. ..+.++|++++
T Consensus 154 ~~~--------~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 154 LPP--------PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CSC--------TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCC--------CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 322 45799999999843 4666666554 36778998885
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.57 E-value=3.4e-07 Score=82.22 Aligned_cols=120 Identities=14% Similarity=0.049 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHhH------cCCCEEEEEccchhHHHHHHHHhCC--CCcEEEEEeCCchhHHHH--HHHHHHcCCC--
Q 029536 3 TSPDEAQFFSMLLKL------INAKNTMEIGVFTGYSLLATALAIP--DDGKILALDITKEHYEKG--LPIIQKAGVA-- 70 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~------~~~~~ileiG~g~G~~~~~la~~~~--~~~~v~~vD~~~~~~~~a--~~~~~~~~~~-- 70 (192)
+.++...+|..++.. .++.+|||.|||+|..++.+++.++ ...+++|+|+++.+++.| +.++....+.
T Consensus 299 TP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG 378 (878)
T 3s1s_A 299 TDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS 378 (878)
T ss_dssp CCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT
T ss_pred CCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC
Confidence 456677777777321 1356999999999999999998764 136799999999999999 5554431221
Q ss_pred -CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcC--------------------------------cHHH
Q 029536 71 -HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN--------------------------------YVNY 117 (192)
Q Consensus 71 -~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~--------------------------------~~~~ 117 (192)
....+...|..... .. ...+||+|+.+++... +..+
T Consensus 379 i~~~~I~~dD~L~~~-~~----------~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aF 447 (878)
T 3s1s_A 379 NNAPTITGEDVCSLN-PE----------DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALF 447 (878)
T ss_dssp TBCCEEECCCGGGCC-GG----------GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHH
T ss_pred CCcceEEecchhccc-cc----------ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHH
Confidence 12355555554321 11 1468999999877310 2346
Q ss_pred HHHHHhccCCCeEEEE
Q 029536 118 HKRLIELVKVGGVIGY 133 (192)
Q Consensus 118 ~~~~~~~L~~gG~lv~ 133 (192)
++.+.++|++||.+++
T Consensus 448 Ie~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 448 LELVTELVQDGTVISA 463 (878)
T ss_dssp HHHHHHHSCTTCEEEE
T ss_pred HHHHHHhcCCCcEEEE
Confidence 6778899999997764
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.51 E-value=3.7e-08 Score=72.73 Aligned_cols=88 Identities=10% Similarity=0.067 Sum_probs=66.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.+||++|||. +.+|+++.+++.|++... .+++++.+|..+.. .. +.
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~-~~--------~~ 59 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLL-QS--------AH 59 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGG-GG--------CC
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCc-cc--------cC
Confidence 4568999999974 238999999999998753 24889999886542 10 00
Q ss_pred CCCcccEEEEeCC---C-cCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDAD---K-DNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~---~-~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+++||+|++... . .+...+++.+.+.|||||.+++.+.
T Consensus 60 ~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 2678999998543 2 5668899999999999999998543
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.41 E-value=1.3e-06 Score=69.52 Aligned_cols=80 Identities=11% Similarity=0.026 Sum_probs=64.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.+...++|.+||.|+-+..++.. +++|+++|.+|.+++.|++ +.. +++++++++..++...+...
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~------- 85 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAAL------- 85 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHT-------
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHc-------
Confidence 34579999999999999999986 5899999999999999998 643 58999999998764444321
Q ss_pred CCCcccEEEEeCCCc
Q 029536 98 YHGTFDFVFVDADKD 112 (192)
Q Consensus 98 ~~~~~D~v~id~~~~ 112 (192)
...++|.|++|....
T Consensus 86 g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 86 GVERVDGILADLGVS 100 (285)
T ss_dssp TCSCEEEEEEECSCC
T ss_pred CCCCcCEEEeCCccc
Confidence 135799999997644
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.23 E-value=7.5e-06 Score=58.87 Aligned_cols=93 Identities=10% Similarity=0.076 Sum_probs=60.4
Q ss_pred HHHHHHHhHcC-CCEEEEEccchh-HHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH
Q 029536 9 QFFSMLLKLIN-AKNTMEIGVFTG-YSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (192)
Q Consensus 9 ~~l~~l~~~~~-~~~ileiG~g~G-~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 86 (192)
.+...+.+..+ +.++||||||.| ..+..|++.. +..|+++|++|..++ ++..|..+....
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~ 85 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRME 85 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHH
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCccc
Confidence 34455555555 569999999999 5999998742 578999999998765 777776543222
Q ss_pred HHhhhhcccccCCCcccEEE-EeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 87 LIQDVSSTKEKYHGTFDFVF-VDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~-id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
+ -..||+|+ +.++.+ ....+-.+.+.+ |.-+++
T Consensus 86 ~-----------Y~~~DLIYsirPP~E-l~~~i~~lA~~v--~adliI 119 (153)
T 2k4m_A 86 I-----------YRGAALIYSIRPPAE-IHSSLMRVADAV--GARLII 119 (153)
T ss_dssp H-----------HTTEEEEEEESCCTT-THHHHHHHHHHH--TCEEEE
T ss_pred c-----------cCCcCEEEEcCCCHH-HHHHHHHHHHHc--CCCEEE
Confidence 2 25899995 545444 444444443333 444444
No 288
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.12 E-value=8.8e-06 Score=70.53 Aligned_cols=122 Identities=11% Similarity=0.068 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCC------------CcEEEEEeCCchhHHHHHHHHHHcCCC
Q 029536 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD------------DGKILALDITKEHYEKGLPIIQKAGVA 70 (192)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~ 70 (192)
+++...++|..++......+|+|-.||+|.......+.+.. ...++|+|+++.....|+-++--++..
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 45677778888887777789999999999998877654421 246999999999999999998888873
Q ss_pred CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------------------CcHHHHHHHHhccC-----
Q 029536 71 HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------------------NYVNYHKRLIELVK----- 126 (192)
Q Consensus 71 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------------------~~~~~~~~~~~~L~----- 126 (192)
...+..+|+...-..- .....+||+|+.+++.. ....++..+...|+
T Consensus 281 -~~~I~~~dtL~~~~~~--------~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~ 351 (530)
T 3ufb_A 281 -YPRIDPENSLRFPLRE--------MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHG 351 (530)
T ss_dssp -CCEEECSCTTCSCGGG--------CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSS
T ss_pred -cccccccccccCchhh--------hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhc
Confidence 4567788875421000 00145799999987621 11245666777776
Q ss_pred --CCeEEEE
Q 029536 127 --VGGVIGY 133 (192)
Q Consensus 127 --~gG~lv~ 133 (192)
+||.+.+
T Consensus 352 l~~gGr~av 360 (530)
T 3ufb_A 352 SDNGGRAAV 360 (530)
T ss_dssp SSSCCEEEE
T ss_pred cCCCceEEE
Confidence 6886544
No 289
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.03 E-value=1.7e-05 Score=64.58 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=63.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+...++|..+|.|+-+..++..+++.++|+++|.+|.+++.|+ .+ ..+++++++++..++...+... + .
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~-----g-~ 125 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAER-----D-L 125 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHT-----T-C
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhc-----C-C
Confidence 3568999999999999999998866899999999999999884 33 2478999999998776555421 0 0
Q ss_pred CCcccEEEEeC
Q 029536 99 HGTFDFVFVDA 109 (192)
Q Consensus 99 ~~~~D~v~id~ 109 (192)
.+++|.|++|.
T Consensus 126 ~~~vDgILfDL 136 (347)
T 3tka_A 126 IGKIDGILLDL 136 (347)
T ss_dssp TTCEEEEEEEC
T ss_pred CCcccEEEECC
Confidence 13699999984
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.03 E-value=1.1e-05 Score=66.62 Aligned_cols=71 Identities=7% Similarity=0.083 Sum_probs=54.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
.++.++||+||++|++|..++.. +++|++||+.+-.- .+.. .++|+++.+|+..+.+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~~-----~l~~---~~~V~~~~~d~~~~~~------------ 266 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMAQ-----SLMD---TGQVTWLREDGFKFRP------------ 266 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCCH-----HHHT---TTCEEEECSCTTTCCC------------
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcCh-----hhcc---CCCeEEEeCccccccC------------
Confidence 35789999999999999999875 68999999875221 1111 2689999999876532
Q ss_pred CCCcccEEEEeCCC
Q 029536 98 YHGTFDFVFVDADK 111 (192)
Q Consensus 98 ~~~~~D~v~id~~~ 111 (192)
...++|+|++|...
T Consensus 267 ~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 267 TRSNISWMVCDMVE 280 (375)
T ss_dssp CSSCEEEEEECCSS
T ss_pred CCCCcCEEEEcCCC
Confidence 25689999999864
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.90 E-value=9.3e-06 Score=64.28 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=61.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||+||++|.++..++...+ ..+++++|+.-+....... ....+ .++..+.++.... .+ .
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g--~~ii~~~~~~dv~--~l----------~ 137 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLG--WNIITFKDKTDIH--RL----------E 137 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTT--GGGEEEECSCCTT--TS----------C
T ss_pred CCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCC--CCeEEEeccceeh--hc----------C
Confidence 346899999999999999886543 4678888887432100000 00001 1344455554211 12 2
Q ss_pred CCcccEEEEeCCCcC---c------HHHHHHHHhccCCC-eEEEEe
Q 029536 99 HGTFDFVFVDADKDN---Y------VNYHKRLIELVKVG-GVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~~---~------~~~~~~~~~~L~~g-G~lv~~ 134 (192)
.++||+|+.|..+.. . ...++.+.+.|+|| |.+++.
T Consensus 138 ~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 138 PVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 678999999974321 1 12456667999999 999983
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.77 E-value=9.1e-06 Score=64.44 Aligned_cols=100 Identities=10% Similarity=0.010 Sum_probs=62.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+|||+||+.|.++...+...+ ..+++++|+.......+... .. ...++..+..+.. .. .+ .
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~--~g~~ii~~~~~~d-v~-~l----------~ 153 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TT--LGWNLIRFKDKTD-VF-NM----------E 153 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CB--TTGGGEEEECSCC-GG-GS----------C
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-cc--CCCceEEeeCCcc-hh-hc----------C
Confidence 456899999999999999886544 56789999976532211100 00 1123333333321 11 12 2
Q ss_pred CCcccEEEEeCCCc-------Cc--HHHHHHHHhccCCC--eEEEEe
Q 029536 99 HGTFDFVFVDADKD-------NY--VNYHKRLIELVKVG--GVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~-------~~--~~~~~~~~~~L~~g--G~lv~~ 134 (192)
.+++|+|+.|..+. ++ ...++.+.+.|+|| |.+++-
T Consensus 154 ~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 154 VIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 67899999997632 11 23466667899999 999874
No 293
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.71 E-value=4.4e-05 Score=67.96 Aligned_cols=108 Identities=17% Similarity=0.166 Sum_probs=73.9
Q ss_pred CCCEEEEEccchhHHHHHHHHhC-------CC--C--cEEEEEeCCchhHHHHHH--------------HHHHcCC----
Q 029536 19 NAKNTMEIGVFTGYSLLATALAI-------PD--D--GKILALDITKEHYEKGLP--------------IIQKAGV---- 69 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~-------~~--~--~~v~~vD~~~~~~~~a~~--------------~~~~~~~---- 69 (192)
++-+|+|+|.|+|+..+.+.+.. |. . -+++++|..|-..+..++ .+.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999888876643 11 1 579999996644433332 2222211
Q ss_pred ------CC---ceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcCc------HHHHHHHHhccCCCeEEEE
Q 029536 70 ------AH---KIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNY------VNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 70 ------~~---~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~------~~~~~~~~~~L~~gG~lv~ 133 (192)
++ .++++.||+.+.++.+... ....+|.+|+|+..... .++|..+.+++++||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~-------~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDS-------LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGG-------GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccc-------cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 11 4678999999888765211 13689999999873333 7889999999999999874
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.68 E-value=0.00017 Score=57.67 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=46.6
Q ss_pred HHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC
Q 029536 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV 69 (192)
Q Consensus 9 ~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 69 (192)
+++..++.. .+...|||.+||+|..+..++.. +.+++++|+++.+++.|++++.....
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~ 282 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVP 282 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 455555544 35679999999999999987764 46899999999999999999987543
No 295
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.67 E-value=0.00024 Score=57.21 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=67.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHh---CCCCc--EEEEEeCCc--------h-hHHHHHHHHHHcCC--CC--ceEEEeCC
Q 029536 18 INAKNTMEIGVFTGYSLLATALA---IPDDG--KILALDITK--------E-HYEKGLPIIQKAGV--AH--KIDFREGP 79 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~---~~~~~--~v~~vD~~~--------~-~~~~a~~~~~~~~~--~~--~v~~~~~d 79 (192)
.+.-+|+|+|-|+|...+..... ..+.. +++++|..+ + ..+..+..+..... .. ..++..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 34458999999999976543221 12233 567777533 1 22233333333211 12 35678999
Q ss_pred chhHHHHHHhhhhcccccCCCcccEEEEeCC--C---cC-cHHHHHHHHhccCCCeEEE
Q 029536 80 ALPLLDQLIQDVSSTKEKYHGTFDFVFVDAD--K---DN-YVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~--~---~~-~~~~~~~~~~~L~~gG~lv 132 (192)
+.+.++.+. ..++|++|.|+. . +. ..++|+.+.++++|||+++
T Consensus 175 a~~~l~~l~----------~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 175 ARKRIKEVE----------NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHHHGGGCC----------SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHhhhc----------ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 988887652 458999999985 1 11 2689999999999999997
No 296
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.65 E-value=0.00016 Score=59.39 Aligned_cols=59 Identities=5% Similarity=-0.086 Sum_probs=49.7
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 83 (192)
...|||||+|.|..|..|+.... ..+|+++|++++.+...++.+ . .++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47899999999999999997643 468999999999998887765 2 36899999999765
No 297
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.53 E-value=0.0001 Score=58.83 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=60.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+.++|||+||++|.|+..++...+ ...|+++|+.......... .. ....++....... +.. .+ .
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~--~~~~~iv~~~~~~-di~-~l----------~ 144 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQ--TLGWNIVKFKDKS-NVF-TM----------P 144 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CC--BTTGGGEEEECSC-CTT-TS----------C
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-cc--ccCCceEEeecCc-eee-ec----------C
Confidence 457999999999999999997644 4678999987532110000 00 0011222222221 111 11 2
Q ss_pred CCcccEEEEeCCCc-------Cc--HHHHHHHHhccCCC-eEEEEe
Q 029536 99 HGTFDFVFVDADKD-------NY--VNYHKRLIELVKVG-GVIGYD 134 (192)
Q Consensus 99 ~~~~D~v~id~~~~-------~~--~~~~~~~~~~L~~g-G~lv~~ 134 (192)
.+++|+|+.|..+. ++ ...++.+.+.|+|| |.+++-
T Consensus 145 ~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 145 TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 57899999997533 11 23466667999999 999885
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.52 E-value=5.7e-05 Score=59.16 Aligned_cols=93 Identities=10% Similarity=0.039 Sum_probs=57.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC--C-CcEEEEEe--CCchhHHHHHHHHHHcCCCCceEEEeC-CchhHHHHHHhhhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP--D-DGKILALD--ITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDVS 92 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~--~-~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~ 92 (192)
+..+|+|+||+.|.|+.+.+...+ . .+.++++| +.|-... ..|. .-++|+.+ |..+.
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~--------- 135 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYK--------- 135 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGS---------
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCC---------
Confidence 356999999999999999887522 1 23455555 2221000 0011 12356657 87652
Q ss_pred cccccCCCcccEEEEeCCCcC---------cHHHHHHHHhccCCCe-EEEE
Q 029536 93 STKEKYHGTFDFVFVDADKDN---------YVNYHKRLIELVKVGG-VIGY 133 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~---------~~~~~~~~~~~L~~gG-~lv~ 133 (192)
...++|+|+.|..+.. ....++.+.+.|+||| .+++
T Consensus 136 -----~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 136 -----PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp -----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred -----CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 1458999999975211 1225666778999999 7876
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.44 E-value=0.00074 Score=52.31 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=64.1
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeC-CchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~~~~ 97 (192)
+...|+|+||++|.++.+.+.... ..+|+++|+-+.--+.=+ .+...|. +.++|+.+ |....
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~-~~~s~gw-n~v~fk~gvDv~~~-------------- 140 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPV-PMSTYGW-NIVKLMSGKDVFYL-------------- 140 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCC-CCCCTTT-TSEEEECSCCGGGC--------------
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcc-hhhhcCc-CceEEEeccceeec--------------
Confidence 456999999999999998887644 468999999754211000 0112233 56899999 76322
Q ss_pred CCCcccEEEEeCCCcC---------cHHHHHHHHhccCCCeEEEE
Q 029536 98 YHGTFDFVFVDADKDN---------YVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~---------~~~~~~~~~~~L~~gG~lv~ 133 (192)
...++|.|++|..+.. ....++.+.+.|++ |-++|
T Consensus 141 ~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 141 PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 1467999999965321 13356666788988 66665
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.29 E-value=0.00057 Score=54.56 Aligned_cols=98 Identities=10% Similarity=0.083 Sum_probs=62.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeC-CchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~~~~ 97 (192)
+...|||+||++|.++.+.+.... ..+|+++|+-..--+.=+ .+.+.+. .-|.++.+ |.... +
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~-~~~ql~w-~lV~~~~~~Dv~~l-~------------ 157 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQ-LVQSYGW-NIVTMKSGVDVFYR-P------------ 157 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCC-CCCBTTG-GGEEEECSCCTTSS-C------------
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcc-hhhhcCC-cceEEEeccCHhhC-C------------
Confidence 345899999999999998876543 468999999754110000 0001111 23778877 65322 1
Q ss_pred CCCcccEEEEeCCCcC---------cHHHHHHHHhccCCC-eEEEE
Q 029536 98 YHGTFDFVFVDADKDN---------YVNYHKRLIELVKVG-GVIGY 133 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~---------~~~~~~~~~~~L~~g-G~lv~ 133 (192)
..++|+|++|..... ....++.+.+.|++| |-++|
T Consensus 158 -~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 158 -SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp -CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred -CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 467999999965211 133566667889888 77776
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.15 E-value=0.0013 Score=52.53 Aligned_cols=87 Identities=13% Similarity=0.188 Sum_probs=59.4
Q ss_pred CCEEEEEcc------chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 20 AKNTMEIGV------FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 20 ~~~ileiG~------g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
..+|||+|+ ..|.+ .+....|.++.|+++|+.+-.. . .. .++++|..+..
T Consensus 110 gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------d-a~-~~IqGD~~~~~--------- 165 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------D-AD-STLIGDCATVH--------- 165 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------S-SS-EEEESCGGGEE---------
T ss_pred CCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------C-CC-eEEEccccccc---------
Confidence 469999995 78884 3334456447999999987431 1 12 45899964421
Q ss_pred ccccCCCcccEEEEeCCC--------cC------cHHHHHHHHhccCCCeEEEEe
Q 029536 94 TKEKYHGTFDFVFVDADK--------DN------YVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~--------~~------~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..++||+|+.|..+ .. ....++-+.+.|+|||.+++-
T Consensus 166 ----~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 166 ----TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp ----ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 15789999999541 11 234556677899999999875
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.12 E-value=0.002 Score=53.45 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=48.5
Q ss_pred CCEEEEEccchhHHHHHHHHh-------------C---CCCcEEEEEeCC-----------chhHHHHHHHHHHcCCCCc
Q 029536 20 AKNTMEIGVFTGYSLLATALA-------------I---PDDGKILALDIT-----------KEHYEKGLPIIQKAGVAHK 72 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~-------------~---~~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~~ 72 (192)
+.+|+|+||++|..|+.+... . ++..+|+.-|+. |...+..++ ..+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 568999999999999987665 1 124678888876 333322211 2222223
Q ss_pred eEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCC
Q 029536 73 IDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 73 v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
..|+.+.+-.+..++. ..+++|+|+....
T Consensus 130 ~~f~~gvpgSFy~rlf---------p~~S~d~v~Ss~a 158 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF---------PEESMHFLHSCYC 158 (384)
T ss_dssp SEEEEECCSCTTSCCS---------CTTCEEEEEEESC
T ss_pred ceEEEecchhhhhccC---------CCCceEEEEecce
Confidence 4666666655544432 3679999997743
No 303
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.12 E-value=0.0068 Score=49.38 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=66.1
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCC---chhHHHHHHhhhh
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP---ALPLLDQLIQDVS 92 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~~~~~ 92 (192)
..+.++||-+|+|. |..+..+|+... ..+|+++|.+++..+.+++ .|.. .++..+ ..++.+.+...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~-- 238 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQ-- 238 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHH--
Confidence 34568999999874 778888888763 3389999999988776654 4542 223322 23333333221
Q ss_pred cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 93 STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
....+|+||-... ....++.+++.|+++|.++.-.
T Consensus 239 -----~~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 -----LGCKPEVTIECTG---AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp -----HTSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred -----hCCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEe
Confidence 0257999865332 2445778889999999988754
No 304
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.10 E-value=0.0014 Score=53.70 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=65.7
Q ss_pred cCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.+.++||.+|+|. |..+..+|+... ..+|+++|.+++..+.+++ .|.. .++.....++.+.+...
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~~------ 254 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQ----LGAT---HVINSKTQDPVAAIKEI------ 254 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHH------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCC---EEecCCccCHHHHHHHh------
Confidence 4567999999875 778888888753 3379999999988887764 3432 12222212222222211
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
..+.+|+||-... ....++.+++.|+++|.+++-...
T Consensus 255 -~~gg~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 255 -TDGGVNFALESTG---SPEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp -TTSCEEEEEECSC---CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -cCCCCcEEEECCC---CHHHHHHHHHHHhcCCEEEEeCCC
Confidence 1347999865332 245678889999999999875443
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.09 E-value=0.0017 Score=54.34 Aligned_cols=60 Identities=8% Similarity=0.139 Sum_probs=47.2
Q ss_pred cCCCEEEEEccchhHHHHHHH-HhCCCCcEEEEEeCCchhHHHHHHHHHH--cCCC-CceEEEe
Q 029536 18 INAKNTMEIGVFTGYSLLATA-LAIPDDGKILALDITKEHYEKGLPIIQK--AGVA-HKIDFRE 77 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~~-~~v~~~~ 77 (192)
.+...++|||++.|..++.++ +..++.++|+++|++|...+..+++++. .+.. +++++++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 456799999999999999988 4555348999999999999999999987 2222 4555543
No 306
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.03 E-value=0.0029 Score=56.07 Aligned_cols=106 Identities=20% Similarity=0.215 Sum_probs=70.6
Q ss_pred CEEEEEccchhHHHHHHHHhC-------C--C--CcEEEEEeC---CchhHHHH-----------HHHHHHcCCC-----
Q 029536 21 KNTMEIGVFTGYSLLATALAI-------P--D--DGKILALDI---TKEHYEKG-----------LPIIQKAGVA----- 70 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~-------~--~--~~~v~~vD~---~~~~~~~a-----------~~~~~~~~~~----- 70 (192)
-+|+|+|-|+|...+...... | . .-+++++|. +++.+..+ ++.+......
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999887765543 1 1 146999998 44444322 2333332211
Q ss_pred --------CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC-----cC-cHHHHHHHHhccCCCeEEEE
Q 029536 71 --------HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK-----DN-YVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 71 --------~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~-----~~-~~~~~~~~~~~L~~gG~lv~ 133 (192)
-.+++..+|+.+.++.+... ....+|.+|+|+.. +. ..++|..+.++++|||.+..
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~-------~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDS-------LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGG-------GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccc-------cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 23567889998887765211 13679999999862 21 36789999999999999874
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.99 E-value=0.0032 Score=52.20 Aligned_cols=105 Identities=19% Similarity=0.192 Sum_probs=66.0
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc-hhHHHHHHhhhhcc
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~ 94 (192)
..+.++||.+|+|. |..+..+|+... ..+|+++|.+++.++.+++ .|. +-+.....+. .+.+..+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~------ 250 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL------ 250 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh------
Confidence 34568999999875 888888888753 3489999999988776654 444 2111111222 22233321
Q ss_pred cccCCCcccEEEEeCCCcC-----------cHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDN-----------YVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|+||-...... ....++.+++.|++||.+++-..
T Consensus 251 ---~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 251 ---GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp ---SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred ---CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 1237999865433221 13467888999999999886443
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.95 E-value=0.0021 Score=50.35 Aligned_cols=57 Identities=5% Similarity=0.104 Sum_probs=44.7
Q ss_pred HHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC
Q 029536 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG 68 (192)
Q Consensus 9 ~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 68 (192)
.++..++.. .+...|||..||+|..+...... +-+++++|+++..++.++++++..+
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 455555544 35679999999999988876654 4689999999999999999987654
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.92 E-value=0.0039 Score=50.43 Aligned_cols=100 Identities=18% Similarity=0.144 Sum_probs=67.2
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+| .|..+..+|+.. +.+|+++|.+++..+.+++ .|.. . ++.....++.+.+...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~--~-~i~~~~~~~~~~~~~~----- 229 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAE--V-AVNARDTDPAAWLQKE----- 229 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCS--E-EEETTTSCHHHHHHHH-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCC--E-EEeCCCcCHHHHHHHh-----
Confidence 3456799999987 488888899886 4699999999988876654 4542 1 2222222333333212
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+.+|.||.... ..+.++.+.+.|+++|.++.-..
T Consensus 230 ---~g~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 230 ---IGGAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp ---HSSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred ---CCCCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeCC
Confidence 347899876432 24567888999999999987544
No 310
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.87 E-value=0.0039 Score=50.93 Aligned_cols=75 Identities=11% Similarity=-0.006 Sum_probs=55.8
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH-HHhhhhcccccC
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ-LIQDVSSTKEKY 98 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~~~~ 98 (192)
+.+++|+.||+|..++.+..+.-.-..+.++|+++.+.+..+.|+. ...++.+|..++... +.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~---------- 65 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFD---------- 65 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHH----------
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcC----------
Confidence 4589999999999999988763112479999999999998888763 344678888765432 21
Q ss_pred CCcccEEEEeCC
Q 029536 99 HGTFDFVFVDAD 110 (192)
Q Consensus 99 ~~~~D~v~id~~ 110 (192)
...+|+++.+.+
T Consensus 66 ~~~~D~l~~gpP 77 (343)
T 1g55_A 66 RLSFDMILMSPP 77 (343)
T ss_dssp HHCCSEEEECCC
T ss_pred cCCcCEEEEcCC
Confidence 126899999876
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.84 E-value=0.0025 Score=47.37 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=61.9
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||.+|+ |.|..+..++... +.+|++++.+++..+.+++ .+.. . .+..+..+..+.+...
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~~~~~----- 102 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVE--Y-VGDSRSVDFADEILEL----- 102 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCS--E-EEETTCSTHHHHHHHH-----
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--E-EeeCCcHHHHHHHHHH-----
Confidence 35679999994 6677777777654 4689999999877665543 3432 2 2222222232332211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+++.... ...++.+.+.|+++|.++.-..
T Consensus 103 -~~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 103 -TDGYGVDVVLNSLA----GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp -TTTCCEEEEEECCC----THHHHHHHHTEEEEEEEEECSC
T ss_pred -hCCCCCeEEEECCc----hHHHHHHHHHhccCCEEEEEcC
Confidence 01246999885443 2567888899999999887443
No 312
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.78 E-value=0.0012 Score=54.69 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=25.4
Q ss_pred CCEEEEEccchhHHHHHHHHhC--------------CCCcEEEEEeCCch
Q 029536 20 AKNTMEIGVFTGYSLLATALAI--------------PDDGKILALDITKE 55 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~--------------~~~~~v~~vD~~~~ 55 (192)
+.+|+|+||++|..|+.+...+ ++..+|..-|+...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N 102 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN 102 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc
Confidence 4689999999999998873221 13567777776543
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.77 E-value=0.0039 Score=51.21 Aligned_cols=108 Identities=14% Similarity=0.066 Sum_probs=68.0
Q ss_pred HhHcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 15 LKLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 15 ~~~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
+...+.++||-+|+|. |..+..+|+... ..+|++++.+++..+.+++ .|.. ..+.....++.+.+...
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~i~~~--- 246 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGAT---ATVDPSAGDVVEAIAGP--- 246 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCS---EEECTTSSCHHHHHHST---
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCC---EEECCCCcCHHHHHHhh---
Confidence 3445678999998864 778888888764 3489999999988877665 4442 12222222333333210
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.....+.+|+||-... ....++.+.+.|++||.+++-...
T Consensus 247 -~~~~~gg~Dvvid~~G---~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 247 -VGLVPGGVDVVIECAG---VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp -TSSSTTCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred -hhccCCCCCEEEECCC---CHHHHHHHHHHhccCCEEEEEecc
Confidence 0001348999864322 245678889999999999875443
No 314
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.76 E-value=0.019 Score=46.23 Aligned_cols=104 Identities=18% Similarity=0.147 Sum_probs=66.7
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+| .|..+..+|+... ...++++|.+++..+.+++ .|...-+.....+..+....+.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~------- 225 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLR------- 225 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHG-------
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhc-------
Confidence 3456899999886 4556677787764 4678999999988777665 5543222222233333333332
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
....+|+|+-... ....++.+.+.|++||.+++-...
T Consensus 226 --~~~g~d~v~d~~G---~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 226 --ELRFNQLILETAG---VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp --GGCSSEEEEECSC---SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred --ccCCccccccccc---ccchhhhhhheecCCeEEEEEecc
Confidence 1345777654332 345678888999999999876544
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.69 E-value=0.019 Score=46.63 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=63.7
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCC-chhHHHHHHhhhhcc
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP-ALPLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~~~~~~ 94 (192)
..+.++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .|.. .++..+ ..++.+.+... +
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~---~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIER---I 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHH---H
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHH---h
Confidence 34568999999863 77788888876 4679999999988776654 4542 122211 11222222111 0
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.......+|+||-... ....++.+++.|+++|.++.-.
T Consensus 234 ~~~~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSG---NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHSSSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred ccccCCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 0000246999865332 2345778889999999988754
No 316
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.69 E-value=0.012 Score=48.18 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=63.8
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeC----CchhHHHHHHhhhh
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG----PALPLLDQLIQDVS 92 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~----d~~~~~~~~~~~~~ 92 (192)
.+.++||-+|+| .|..+..+|+... ..+|++++.+++..+.+++ .|.. .+ +-.. +..+.+....
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~-~v-i~~~~~~~~~~~~~~~~~---- 259 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKV----FGAT-DF-VNPNDHSEPISQVLSKMT---- 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCC-EE-ECGGGCSSCHHHHHHHHH----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----hCCc-eE-EeccccchhHHHHHHHHh----
Confidence 346799999976 4777888888763 2389999999998887764 4442 11 1111 1222222221
Q ss_pred cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCC-eEEEEeCc
Q 029536 93 STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 136 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~g-G~lv~~d~ 136 (192)
.+.+|+||-... ....++.+++.|+++ |.++.-..
T Consensus 260 ------~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 260 ------NGGVDFSLECVG---NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp ------TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ------CCCCCEEEECCC---CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 347999865332 245678889999999 98887543
No 317
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.69 E-value=0.011 Score=48.42 Aligned_cols=101 Identities=20% Similarity=0.282 Sum_probs=63.9
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEe--CCchhHHHHHHhhhhcc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE--GPALPLLDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~~~ 94 (192)
.+.++||-+|+| .|..+..+|+... ..+|+++|.+++..+.+++ .|...-+.... .+..+.+.+..
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~------ 262 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKA----LGATDCLNPRELDKPVQDVITELT------ 262 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHH------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCcEEEccccccchHHHHHHHHh------
Confidence 345799999986 4777888888763 3489999999998877654 45421111100 12222222221
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCC-eEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~g-G~lv~~d~ 136 (192)
.+.+|+||--.. ....++.+++.|+++ |.+++-..
T Consensus 263 ----~~g~Dvvid~~G---~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 263 ----AGGVDYSLDCAG---TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ----TSCBSEEEESSC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ----CCCccEEEECCC---CHHHHHHHHHHhhcCCCEEEEECC
Confidence 347999864332 245678889999999 98886543
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.64 E-value=0.0047 Score=50.76 Aligned_cols=102 Identities=20% Similarity=0.278 Sum_probs=65.4
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEE--eCCchhHHHHHHhhhhcc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFR--EGPALPLLDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~ 94 (192)
.+.++||-+|+| .|..+..+|+... ..+|+++|.+++.++.+++ .|...-+... ..+..+.+.++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~------- 259 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK----FGVNEFVNPKDHDKPIQEVIVDL------- 259 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT----TTCCEEECGGGCSSCHHHHHHHH-------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCcEEEccccCchhHHHHHHHh-------
Confidence 356789999986 5778888888763 3489999999998876654 4542111111 11222223222
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCC-eEEEEeCcc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNTL 137 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~g-G~lv~~d~~ 137 (192)
..+.+|+||--.. ....++.+.+.|++| |.+++-...
T Consensus 260 ---~~gg~D~vid~~g---~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 260 ---TDGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp ---TTSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred ---cCCCCCEEEECCC---CHHHHHHHHHHhhccCCEEEEEccc
Confidence 1448999865332 345678889999997 988875543
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.61 E-value=0.0098 Score=48.71 Aligned_cols=102 Identities=15% Similarity=0.249 Sum_probs=64.4
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc--hhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--LPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~~~~~~~~~~ 93 (192)
..+.++||-+|+| .|..+..+|+... ..+|+++|.+++..+.+++ .|.. . ++.... .++.+.+.+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~-~--vi~~~~~~~~~~~~i~~~--- 257 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE----LGAT-E--CLNPKDYDKPIYEVICEK--- 257 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----TTCS-E--EECGGGCSSCHHHHHHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCc-E--EEecccccchHHHHHHHH---
Confidence 3456799999986 4777888888753 3489999999998877764 4542 1 221110 1222222211
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCC-eEEEEeCc
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 136 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~g-G~lv~~d~ 136 (192)
..+.+|+||--.. ....++.+++.|+++ |.++.-..
T Consensus 258 ----t~gg~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 258 ----TNGGVDYAVECAG---RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ----TTSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ----hCCCCCEEEECCC---CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 1347999864332 245678889999999 98887543
No 320
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.59 E-value=0.007 Score=49.49 Aligned_cols=100 Identities=13% Similarity=0.047 Sum_probs=65.4
Q ss_pred HcCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 17 LINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
..+.++||-+| .+.|..+..+|+.. +.+|++++.+++..+.+++ .|.. .++..+..++.+.+...
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~---- 227 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQE---- 227 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH----
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHh----
Confidence 44568999999 56888888888876 4689999999887776654 4432 12222222222222211
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 228 ---~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 228 ---YPEGVDVVYESVGG----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp ---CTTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECCC
T ss_pred ---cCCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEeC
Confidence 13579998754432 567888899999998887443
No 321
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.59 E-value=0.00095 Score=54.97 Aligned_cols=107 Identities=12% Similarity=0.121 Sum_probs=66.6
Q ss_pred CCEEEEEccchhHHHHHHHHh---------------CCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 20 AKNTMEIGVFTGYSLLATALA---------------IPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~---------------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
+-+|+|+||++|..|+.+... -++..+|+..|+...-....-+.+.......+..|+.+.+-.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357899999999888765544 13357889999877666554444432111113455555544443
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCC-------Cc---------------------C--------cHHHHHHHHhccCCC
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDAD-------KD---------------------N--------YVNYHKRLIELVKVG 128 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~-------~~---------------------~--------~~~~~~~~~~~L~~g 128 (192)
.++. ..+++|+|+.... +. . ...+++...+.|+||
T Consensus 132 ~rlf---------p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 132 GRLF---------PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp SCCS---------CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred hccC---------CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3332 3679999987643 10 1 123566778999999
Q ss_pred eEEEEeC
Q 029536 129 GVIGYDN 135 (192)
Q Consensus 129 G~lv~~d 135 (192)
|.+++.-
T Consensus 203 G~mvl~~ 209 (359)
T 1m6e_X 203 GRMVLTI 209 (359)
T ss_dssp CEEEEEE
T ss_pred ceEEEEE
Confidence 9998753
No 322
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.59 E-value=0.00095 Score=67.14 Aligned_cols=102 Identities=11% Similarity=0.029 Sum_probs=55.0
Q ss_pred CCEEEEEccchhHHHHHHHHhCCC----CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPD----DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+|||||.|+|..+..+...+.. ..+++.+|+++.+.+.|++.++... +....-|..+. +.+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~-~~~-------- 1307 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANP-APG-------- 1307 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCC-CC---------
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----ccccccccccc-ccC--------
Confidence 468999999999988777766642 2479999999999888888776532 22211121110 000
Q ss_pred ccCCCcccEEEEeCC---CcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~---~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+.||+|+.... ..+....+.+++++|+|||.+++...
T Consensus 1308 --~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1308 --SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ------CCEEEEECC--------------------CCEEEEEEC
T ss_pred --CCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 1457999987644 22455678889999999999988654
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.58 E-value=0.0068 Score=49.25 Aligned_cols=104 Identities=21% Similarity=0.270 Sum_probs=65.3
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+|. |..+..+|+... ..+|+++|.+++..+.+++ .|.. .++..+..++.+.+...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~----- 230 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE----YGAT---DIINYKNGDIVEQILKA----- 230 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH----HTCC---EEECGGGSCHHHHHHHH-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH----hCCc---eEEcCCCcCHHHHHHHH-----
Confidence 34568899999874 778888888753 3489999999988777765 3442 12222222233332211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.....+|+||-.... ...++.+++.|++||.++.-...
T Consensus 231 -t~g~g~D~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 231 -TDGKGVDKVVIAGGD---VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp -TTTCCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCCC
T ss_pred -cCCCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEeccc
Confidence 013469998743322 24577888999999999875543
No 324
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.58 E-value=0.01 Score=49.12 Aligned_cols=77 Identities=13% Similarity=-0.071 Sum_probs=55.4
Q ss_pred CEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH-HHhhhhcccccCC
Q 029536 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ-LIQDVSSTKEKYH 99 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~~~~~ 99 (192)
.+++|+.||.|+.++-+..+. -..+.++|+++.+.+..+.|+ +...++.+|..++... +... ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~-----~~~~ 69 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGF-----FKND 69 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHH-----HCSC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhh-----cccC
Confidence 479999999999999988762 346789999999888777765 3567788888765322 2100 0014
Q ss_pred CcccEEEEeCC
Q 029536 100 GTFDFVFVDAD 110 (192)
Q Consensus 100 ~~~D~v~id~~ 110 (192)
..+|+|+.+.+
T Consensus 70 ~~~D~i~ggpP 80 (376)
T 3g7u_A 70 MPIDGIIGGPP 80 (376)
T ss_dssp CCCCEEEECCC
T ss_pred CCeeEEEecCC
Confidence 67999998876
No 325
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.58 E-value=0.0048 Score=49.77 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=66.1
Q ss_pred hHcCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhc
Q 029536 16 KLINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSS 93 (192)
Q Consensus 16 ~~~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 93 (192)
...+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+.+ +.+.. ..+.....++.+.+...
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~--- 214 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVE---ELGFD---GAIDYKNEDLAAGLKRE--- 214 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TTCCS---EEEETTTSCHHHHHHHH---
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCC---EEEECCCHHHHHHHHHh---
Confidence 3456789999997 6788888888875 5699999999887766522 33432 12222222333333221
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+.+|++|-... ...++.+.+.|+++|.++.-..
T Consensus 215 ----~~~~~d~vi~~~g----~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 215 ----CPKGIDVFFDNVG----GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp ----CTTCEEEEEESSC----HHHHHHHHTTEEEEEEEEECCC
T ss_pred ----cCCCceEEEECCC----cchHHHHHHHHhhCCEEEEEee
Confidence 1357998865443 2468888999999999987543
No 326
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.58 E-value=0.0098 Score=48.12 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=66.6
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+|. |..+..+|+... ..+|+++|.+++..+.+++ .|...-+. ...+..+.+.++.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~~i~-~~~~~~~~v~~~t------- 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADAAVK-SGAGAADAIRELT------- 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSEEEE-CSTTHHHHHHHHH-------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCEEEc-CCCcHHHHHHHHh-------
Confidence 34567999999864 778888888764 5799999999988877765 45422111 1112222222221
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
....+|+||-... ....++.+.+.|+++|.++.-...
T Consensus 236 --~g~g~d~v~d~~G---~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 236 --GGQGATAVFDFVG---AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp --GGGCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred --CCCCCeEEEECCC---CHHHHHHHHHHHhcCCEEEEECCC
Confidence 1347998765332 245678889999999999875543
No 327
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.55 E-value=0.014 Score=47.83 Aligned_cols=101 Identities=18% Similarity=0.253 Sum_probs=63.4
Q ss_pred cCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc--hhHHHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--LPLLDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~~~~~~~~~~~ 94 (192)
.+.++||-+|+|. |..+..+|+... ..+|++++.+++..+.+++ .|.. . ++.... .++.+.+...
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~~~~~~~~---- 257 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKE----VGAT-E--CVNPQDYKKPIQEVLTEM---- 257 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCS-E--EECGGGCSSCHHHHHHHH----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCc-e--EecccccchhHHHHHHHH----
Confidence 3567999999764 777888888763 2389999999998877654 4442 1 221110 1122222111
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCC-eEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~g-G~lv~~d~ 136 (192)
..+.+|+||-... ....++.+++.|+++ |.++.-..
T Consensus 258 ---~~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 258 ---SNGGVDFSFEVIG---RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ---TTSCBSEEEECSC---CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred ---hCCCCcEEEECCC---CHHHHHHHHHHhhcCCcEEEEecc
Confidence 1347999865332 245678888999999 98887543
No 328
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.51 E-value=0.07 Score=42.87 Aligned_cols=111 Identities=8% Similarity=-0.035 Sum_probs=71.5
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC--CCceEEEeCCchh-HHHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV--AHKIDFREGPALP-LLDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~~~~~~~~~~ 95 (192)
.++.|+++|||.=.-...+. .+.+.+++=+| .|..++..++.+.+.+. ..+.+++..|..+ +.+.+...
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~----- 173 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSA----- 173 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHT-----
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhc-----
Confidence 46789999996555433332 23357899999 59999999999986543 4678889898765 33333211
Q ss_pred ccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 96 EKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 96 ~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
++.....-++++-+. .+....+++.+...+.||+.|+++.+.
T Consensus 174 g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 174 GFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp TCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred cCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 111223334444333 223456777777888899999998654
No 329
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.48 E-value=0.0078 Score=48.42 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=63.1
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.+++|-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. ..+-..+..+..+.+...
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~----- 210 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKKA----- 210 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHHH-----
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHHH-----
Confidence 45689999997 6777777777764 5699999999887766633 3431 222112212222222211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+.+|+++-.... ..++.+.+.|++||.+++-..
T Consensus 211 --~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 211 --SPDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp --CTTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred --hCCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEec
Confidence 13579998765432 357888899999998886543
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.46 E-value=0.022 Score=39.89 Aligned_cols=93 Identities=6% Similarity=-0.022 Sum_probs=58.0
Q ss_pred CEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhccccc
Q 029536 21 KNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKEK 97 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~~ 97 (192)
.+|+-+|+ |..+..+++.+. .+..|+++|.+++.++.+++ ..+.++.+|..+ .+....
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~--------- 68 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAH--------- 68 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTT---------
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcC---------
Confidence 47888887 555555554442 25689999999988776654 246678888654 333321
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
-...|+|++-.+........-...+.+.|+..++.
T Consensus 69 -i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 69 -LECAKWLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp -GGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred -cccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 35789988865543323323344566777776664
No 331
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.44 E-value=0.018 Score=47.55 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=65.6
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh-HHHHHHhhhhcc
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP-LLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~~~ 94 (192)
..+.++||-+|+|. |..+..+|+... ..+|+++|.+++.++.+++ .|. + .+.-...+ +.+.+...
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~---~i~~~~~~~~~~~v~~~---- 249 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGF-E---IADLSLDTPLHEQIAAL---- 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTC-E---EEETTSSSCHHHHHHHH----
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCC-c---EEccCCcchHHHHHHHH----
Confidence 34568999999864 778888898864 3489999999988877754 454 2 22221111 22222111
Q ss_pred cccCCCcccEEEEeCCCcC------------cHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDN------------YVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~------------~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-...... ....++.+++.|++||.+++-..
T Consensus 250 --t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 250 --LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp --HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred --hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 01247999864333221 23467888999999999887554
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.43 E-value=0.014 Score=47.79 Aligned_cols=101 Identities=18% Similarity=0.269 Sum_probs=63.5
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEe-CC-chhHHHHHHhhhhcc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE-GP-ALPLLDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~-~d-~~~~~~~~~~~~~~~ 94 (192)
.+.++||-+|+| .|..+..+|+... ..+|++++.+++..+.+++ .|.. . ++. .+ ..++.+.+...
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~~~~v~~~---- 256 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKE----FGAT-E--CINPQDFSKPIQEVLIEM---- 256 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----HTCS-E--EECGGGCSSCHHHHHHHH----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCc-e--EeccccccccHHHHHHHH----
Confidence 346799999976 3777778887753 2389999999998887764 3442 1 221 11 01122222211
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCC-eEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~g-G~lv~~d~ 136 (192)
..+.+|+||--.. ....++.+++.|+++ |.++.-..
T Consensus 257 ---~~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 257 ---TDGGVDYSFECIG---NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ---TTSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ---hCCCCCEEEECCC---cHHHHHHHHHhhccCCcEEEEEec
Confidence 1347999865332 245678889999999 98887543
No 333
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.42 E-value=0.035 Score=44.71 Aligned_cols=103 Identities=12% Similarity=0.008 Sum_probs=65.5
Q ss_pred HcCCCEEEEEccchh-HHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVFTG-YSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g~G-~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+|.+ ..+..+++... ..+|+++|.+++..+.+++ .+...-+.....|..+.+.+..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t------- 228 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT------- 228 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT-------
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc-------
Confidence 345679999998854 45555666554 6899999999987766654 4443223333344433333331
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|.++.+.. -...+....+.|+++|.+++-..
T Consensus 229 --~g~g~d~~~~~~~---~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 229 --GGLGVQSAIVCAV---ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp --TSSCEEEEEECCS---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred --CCCCceEEEEecc---CcchhheeheeecCCceEEEEec
Confidence 1345777776543 24567888899999999887543
No 334
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.41 E-value=0.034 Score=45.23 Aligned_cols=106 Identities=12% Similarity=-0.018 Sum_probs=67.4
Q ss_pred hHcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEe--CCchhHHHHHHhhhh
Q 029536 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE--GPALPLLDQLIQDVS 92 (192)
Q Consensus 16 ~~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~ 92 (192)
...+.++||-+|+|. |..+..+|+... ..+|+++|.+++..+.+++. .. .-+.+.. .+..++.+.+...
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~-- 247 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVES-- 247 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHH--
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHH--
Confidence 344568899998864 778888888763 23499999999998888874 21 2223321 1223333333221
Q ss_pred cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 93 STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-... -...++.+.+.|++||.+++-..
T Consensus 248 ----t~g~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 248 ----FGGIEPAVALECTG---VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp ----TSSCCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECCC
T ss_pred ----hCCCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEcc
Confidence 01347999865332 24467888899999999987543
No 335
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.022 Score=46.12 Aligned_cols=101 Identities=12% Similarity=-0.010 Sum_probs=64.0
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||.+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. ..+-..+..++.+.+...
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~----- 234 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGE--VFIDFTKEKDIVGAVLKA----- 234 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCC--EEEETTTCSCHHHHHHHH-----
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCc--eEEecCccHhHHHHHHHH-----
Confidence 45679999998 5788888888765 4699999999887766554 3432 112111112222222110
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+.+|+|+-... ....++.+++.|+++|.++.-..
T Consensus 235 --~~~~~D~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 235 --TDGGAHGVINVSV---SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp --HTSCEEEEEECSS---CHHHHHHHTTSEEEEEEEEECCC
T ss_pred --hCCCCCEEEECCC---cHHHHHHHHHHHhcCCEEEEEeC
Confidence 0237999876443 24567888999999999887544
No 336
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.31 E-value=0.0066 Score=48.94 Aligned_cols=100 Identities=14% Similarity=0.057 Sum_probs=64.2
Q ss_pred cCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+| .+.|..+..+++.. +.+|++++.+++..+.+++ .|.. .++..+..++.+.+...
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~----- 212 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKF----- 212 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHH-----
Confidence 4567999998 35788888888875 5699999999888776654 3431 12222222333332211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 213 -~~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 213 -TNGKGVDASFDSVGK----DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp -TTTSCEEEEEECCGG----GGHHHHHHHEEEEEEEEECCC
T ss_pred -hCCCCceEEEECCCh----HHHHHHHHHhccCCEEEEEcC
Confidence 013479998654432 457778899999999887543
No 337
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.26 E-value=0.029 Score=45.47 Aligned_cols=71 Identities=11% Similarity=-0.076 Sum_probs=52.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+..+++|+.||+|+.++.+..+. -..+.++|+++.+.+..+.|+... . .+|..++....
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~----------- 68 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKT----------- 68 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGG-----------
T ss_pred CCCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhh-----------
Confidence 34689999999999999887652 356899999999998888887432 1 57776653321
Q ss_pred CCcccEEEEeCC
Q 029536 99 HGTFDFVFVDAD 110 (192)
Q Consensus 99 ~~~~D~v~id~~ 110 (192)
-..+|+++.+.+
T Consensus 69 ~~~~D~l~~gpP 80 (327)
T 2c7p_A 69 IPDHDILCAGFP 80 (327)
T ss_dssp SCCCSEEEEECC
T ss_pred CCCCCEEEECCC
Confidence 246899998865
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.22 E-value=0.022 Score=47.25 Aligned_cols=103 Identities=6% Similarity=0.004 Sum_probs=60.8
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.+.++||-+|+| .|..+..+|+... ..+|+++|.+++..+.+++ .|.. .++..+..++.+.+...
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~i~~~------ 277 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKE----LGAD---HVIDPTKENFVEAVLDY------ 277 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHH------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCC---EEEcCCCCCHHHHHHHH------
Confidence 345789999886 4777788888763 3499999999988887765 3432 12222222333333211
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHH----hccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLI----ELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~----~~L~~gG~lv~~d~ 136 (192)
.....+|+||-..... ...++.+. +.++++|.+++-..
T Consensus 278 t~g~g~D~vid~~g~~--~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 278 TNGLGAKLFLEATGVP--QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp TTTCCCSEEEECSSCH--HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred hCCCCCCEEEECCCCc--HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 0134799986433322 12333444 44499999987544
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.22 E-value=0.0091 Score=48.26 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=63.1
Q ss_pred HcCCCEEEEEccc--hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 17 LINAKNTMEIGVF--TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG~g--~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
..+.++||-+|+| .|..+..+++.. +++|++++.+++..+.+++ .|.. . .+.....++.+.+...
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~--~-~~~~~~~~~~~~~~~~---- 208 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAA--Y-VIDTSTAPLYETVMEL---- 208 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS--E-EEETTTSCHHHHHHHH----
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCc--E-EEeCCcccHHHHHHHH----
Confidence 3456899999875 788888888775 5699999999998887775 3432 1 2222222232322211
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-.... .......+.|+++|.++.-..
T Consensus 209 --~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 209 --TNGIGADAAIDSIGG----PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp --TTTSCEEEEEESSCH----HHHHHHHHTEEEEEEEEECCC
T ss_pred --hCCCCCcEEEECCCC----hhHHHHHHHhcCCCEEEEEee
Confidence 013479988654332 122344589999999987554
No 340
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.20 E-value=0.011 Score=47.80 Aligned_cols=99 Identities=10% Similarity=0.002 Sum_probs=63.5
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ +.|..+..+++.. +.+|++++.+++..+.+++ .+.. . ++..+ .++.+.+...
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~-~--v~~~~-~~~~~~v~~~----- 222 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGAD-I--VLPLE-EGWAKAVREA----- 222 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS-E--EEESS-TTHHHHHHHH-----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCc-E--EecCc-hhHHHHHHHH-----
Confidence 45679999986 6788888888876 5699999999988877765 3432 1 22222 2333333211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 223 -~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 223 -TGGAGVDMVVDPIGG----PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp -TTTSCEEEEEESCC------CHHHHHHTEEEEEEEEEC--
T ss_pred -hCCCCceEEEECCch----hHHHHHHHhhcCCCEEEEEEc
Confidence 012379998654432 246778899999999887543
No 341
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.19 E-value=0.062 Score=43.95 Aligned_cols=96 Identities=15% Similarity=0.176 Sum_probs=63.6
Q ss_pred HcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .|.. .++.....+....+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~-------- 254 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH-------- 254 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT--------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh--------
Confidence 34568999999874 77888888875 5689999999998887765 3432 22333222333322
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
...+|+||-..... ..++.+++.|+++|.++.-.
T Consensus 255 ---~~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 255 ---LKSFDFILNTVAAP---HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp ---TTCEEEEEECCSSC---CCHHHHHTTEEEEEEEEECC
T ss_pred ---hcCCCEEEECCCCH---HHHHHHHHHhccCCEEEEec
Confidence 35799986543322 12566788999999888644
No 342
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.15 E-value=0.0081 Score=49.09 Aligned_cols=101 Identities=12% Similarity=0.048 Sum_probs=64.6
Q ss_pred cCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.+.++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .|.. . ++..+..++.+.+...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~~v~~~------ 252 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGAD-H--GINRLEEDWVERVYAL------ 252 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS-E--EEETTTSCHHHHHHHH------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCC-E--EEcCCcccHHHHHHHH------
Confidence 3567999999774 77888888876 5699999999988877655 3442 1 2222222222222211
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
.....+|+||-.... ..++.+++.|+++|.+++-...
T Consensus 253 ~~g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 253 TGDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp HTTCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEecC
Confidence 013479998755442 2356778899999988875543
No 343
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.13 E-value=0.0046 Score=48.36 Aligned_cols=53 Identities=9% Similarity=0.162 Sum_probs=40.2
Q ss_pred ceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-----------------CcHHHHHHHHhccCCCeEEEEe
Q 029536 72 KIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-----------------NYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 72 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----------------~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..+++++|+.+.++.+. .+++|+||+|++.. .....++.+.++|+|+|.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~----------~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE----------NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSC----------TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhcc----------ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45688999988887763 56899999999831 1234566678999999988764
No 344
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.10 E-value=0.028 Score=45.33 Aligned_cols=100 Identities=15% Similarity=0.047 Sum_probs=64.5
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+.++||-+|+| .|..+..+|+.. +.+|++++.+++..+.+++ .|.. .++.....++.+.+...
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~----- 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEK----- 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHH-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHH-----
Confidence 3456899999885 577888888875 4699999999988876654 4442 12221111222333211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+.+|+||-... ....++.+.+.|+++|.++.-..
T Consensus 228 ---~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 228 ---VGGVHAAVVTAV---SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ---HSSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred ---hCCCCEEEECCC---CHHHHHHHHHHhhcCCEEEEecc
Confidence 147999865432 23567788899999998886543
No 345
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.08 E-value=0.011 Score=47.98 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=63.8
Q ss_pred cCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+| .+.|..+..+++.. +.+|++++.+++..+.+++ .|.. ..+..+..++.+.+...
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~~~~----- 231 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAK---RGINYRSEDFAAVIKAE----- 231 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCC---EEEeCCchHHHHHHHHH-----
Confidence 3567999985 45788888888875 5689999999988877765 3432 12222222233332211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 232 --~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 232 --TGQGVDIILDMIGA----AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp --HSSCEEEEEESCCG----GGHHHHHHTEEEEEEEEECCC
T ss_pred --hCCCceEEEECCCH----HHHHHHHHHhccCCEEEEEEe
Confidence 14579987654432 246778899999998887543
No 346
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.07 E-value=0.061 Score=42.94 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=53.1
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcE-EEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGK-ILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+..+++|+.||.|+.++-+..+.- ... +.++|+++.+.+.-+.|+ +...++.+|..++...-..+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~------- 80 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQE------- 80 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHH-------
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcc-------
Confidence 345899999999999988876521 122 699999998877666654 23467788887754332111
Q ss_pred CCCcccEEEEeCC
Q 029536 98 YHGTFDFVFVDAD 110 (192)
Q Consensus 98 ~~~~~D~v~id~~ 110 (192)
.+.+|+++...+
T Consensus 81 -~~~~Dll~ggpP 92 (295)
T 2qrv_A 81 -WGPFDLVIGGSP 92 (295)
T ss_dssp -TCCCSEEEECCC
T ss_pred -cCCcCEEEecCC
Confidence 257899987754
No 347
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.05 E-value=0.11 Score=37.42 Aligned_cols=115 Identities=10% Similarity=0.130 Sum_probs=75.0
Q ss_pred HHHHHHHHhHcC--CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHH
Q 029536 8 AQFFSMLLKLIN--AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 8 ~~~l~~l~~~~~--~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 85 (192)
...|...+.... +.-|||+|-|.|..=-.|.+.+| +-.++++|-.-..- ..-.++.-.++.||..++++
T Consensus 27 R~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~h--------p~~~P~~e~~ilGdi~~tL~ 97 (174)
T 3iht_A 27 RACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASH--------PDSTPPEAQLILGDIRETLP 97 (174)
T ss_dssp HHHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCC--------GGGCCCGGGEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccC--------CCCCCchHheecccHHHHHH
Confidence 344445555443 35799999999999999999998 78899999742110 01123556789999999988
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCCcCcH------HHH-HHHHhccCCCeEEEEeCccC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADKDNYV------NYH-KRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~~~~~------~~~-~~~~~~L~~gG~lv~~d~~~ 138 (192)
..... ...+.-++..|..-.+.. .++ ..+.++|.|||+++.++-++
T Consensus 98 ~~~~r-------~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 98 ATLER-------FGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp HHHHH-------HCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred HHHHh-------cCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 75322 144555666664422111 122 23458999999999877663
No 348
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.03 E-value=0.009 Score=47.97 Aligned_cols=100 Identities=9% Similarity=-0.018 Sum_probs=64.3
Q ss_pred cCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+| .+.|..+..+++.. +.+|++++.+++..+.+++ .|.. ..+.....++.+.+...
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~----- 204 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAW---ETIDYSHEDVAKRVLEL----- 204 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCccHHHHHHHH-----
Confidence 3467999998 45788888888875 5699999999988877764 3432 12222222333333211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-.... +.++.+.+.|+++|.++.-..
T Consensus 205 -~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 205 -TDGKKCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp -TTTCCEEEEEESSCG----GGHHHHHTTEEEEEEEEECCC
T ss_pred -hCCCCceEEEECCCh----HHHHHHHHHhcCCCEEEEEec
Confidence 013479987654332 356778899999999987543
No 349
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.00 E-value=0.053 Score=44.05 Aligned_cols=115 Identities=11% Similarity=0.106 Sum_probs=73.2
Q ss_pred HHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcC--------------------CCCce
Q 029536 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG--------------------VAHKI 73 (192)
Q Consensus 14 l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--------------------~~~~v 73 (192)
.+...+...|+.+|||...-...+....+ +.+++=||. |+.++.-++.+.+.+ ..++.
T Consensus 92 fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 169 (334)
T 1rjd_A 92 FLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRY 169 (334)
T ss_dssp HHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSE
T ss_pred HHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCce
Confidence 33334567999999999998888876544 567777777 888887777777652 13689
Q ss_pred EEEeCCchh--HHHHHHhhhhcccccCCCcccEEEEeCC-----CcCcHHHHHHHHhccCCCeEE-EEeCc
Q 029536 74 DFREGPALP--LLDQLIQDVSSTKEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVI-GYDNT 136 (192)
Q Consensus 74 ~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~D~v~id~~-----~~~~~~~~~~~~~~L~~gG~l-v~~d~ 136 (192)
+++..|..+ ++..+..+ .+ ......+++.-+. ++....+++.+.... |+|.+ +++-+
T Consensus 170 ~~v~~DL~d~~w~~~ll~~----~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 170 KLAACDLNDITETTRLLDV----CT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp EEEECCTTCHHHHHHHHHT----TC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHh----cC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 999999865 33332211 01 1345566666554 333456667776666 56655 45543
No 350
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.98 E-value=0.0051 Score=49.76 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=40.9
Q ss_pred CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-----------------CcHHHHHHHHhccCCCeEEEE
Q 029536 71 HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-----------------NYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 71 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----------------~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.+.+++++|+.+.++.+. .+++|+|++|++.. ...+.+..+.++|+|||.+++
T Consensus 13 ~~~~ii~gD~~~~l~~l~----------~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP----------EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVV 82 (323)
T ss_dssp SSEEEEESCHHHHGGGSC----------SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCC----------CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEE
Confidence 468899999988766552 67899999998831 134566777899999998876
No 351
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.97 E-value=0.05 Score=44.36 Aligned_cols=97 Identities=18% Similarity=0.119 Sum_probs=63.0
Q ss_pred CCCEEEEEc-c-chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 19 NAKNTMEIG-V-FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG-~-g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
+.++||-+| + +.|..+..+|+.+. +.+|++++.+++..+.+++ .|.. . ++... .++.+.+...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad-~--vi~~~-~~~~~~v~~~------ 235 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAH-H--VIDHS-KPLAAEVAAL------ 235 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCS-E--EECTT-SCHHHHHHTT------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCC-E--EEeCC-CCHHHHHHHh------
Confidence 356899998 3 46888888888743 5799999999988777654 4542 1 22211 1233333211
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
..+.+|+||-... ....++.+.+.|+++|.++.-
T Consensus 236 -~~~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 236 -GLGAPAFVFSTTH---TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -CSCCEEEEEECSC---HHHHHHHHHHHSCTTCEEEEC
T ss_pred -cCCCceEEEECCC---chhhHHHHHHHhcCCCEEEEE
Confidence 2458998765322 235678888999999988864
No 352
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.96 E-value=0.015 Score=46.69 Aligned_cols=99 Identities=10% Similarity=0.042 Sum_probs=62.8
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. . .+..+..+..+.+...
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~i~~~----- 209 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH--H-TINYSTQDFAEVVREI----- 209 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC--E-EEECCCHHHHHHHHHH-----
Confidence 35679999984 6788888888775 4699999999887776654 3432 1 2222222222222111
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.....+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 210 -~~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 210 -TGGKGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp -HTTCCEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred -hCCCCCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 013469998754433 44678889999999888754
No 353
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.92 E-value=0.011 Score=47.75 Aligned_cols=97 Identities=12% Similarity=0.068 Sum_probs=63.3
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeC---CchhHHHHHHhhhh
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG---PALPLLDQLIQDVS 92 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~~~~~ 92 (192)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ +.|.. ..+-.. +..+.+...
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~--~~~d~~~~~~~~~~~~~~----- 221 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFD--DAFNYKEESDLTAALKRC----- 221 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCS--EEEETTSCSCSHHHHHHH-----
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCc--eEEecCCHHHHHHHHHHH-----
Confidence 45689999996 6788888888775 4689999999887766653 23432 112111 222233222
Q ss_pred cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 93 STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..+.+|+++-... ...++.+.+.|+++|.+++-.
T Consensus 222 -----~~~~~d~vi~~~g----~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 222 -----FPNGIDIYFENVG----GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp -----CTTCEEEEEESSC----HHHHHHHHTTEEEEEEEEECC
T ss_pred -----hCCCCcEEEECCC----HHHHHHHHHHHhcCCEEEEEc
Confidence 1357999875443 246788899999999988744
No 354
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.90 E-value=0.0089 Score=48.31 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=40.9
Q ss_pred CceEEE-eCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc----------Cc----HHHHHHHHhccCCCeEEEEe
Q 029536 71 HKIDFR-EGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD----------NY----VNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 71 ~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~----------~~----~~~~~~~~~~L~~gG~lv~~ 134 (192)
...+++ ++|+.+.+..+. .+++|+||+|++.. .+ ...+..+.++|+|||.+++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~----------~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP----------DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC----------TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCc----------cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 457788 999998887663 56899999999832 12 34556677999999988773
No 355
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.88 E-value=0.062 Score=43.36 Aligned_cols=99 Identities=14% Similarity=0.043 Sum_probs=63.6
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc-hhHHHHHHhhhhcccc
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~~~ 96 (192)
+.++||-+|+| .|..+..+|+..-++.+|++++.+++..+.+++ .|.. . ++.... .+....+.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~~~~~-------- 234 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD-Y--VSEMKDAESLINKLT-------- 234 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS-E--EECHHHHHHHHHHHH--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC-E--EeccccchHHHHHhh--------
Confidence 67899999986 377778888775114689999999988877765 3431 1 221111 22333332
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|+||-... ....++.+.+.|+++|.++.-..
T Consensus 235 -~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 235 -DGLGASIAIDLVG---TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp -TTCCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred -cCCCccEEEECCC---ChHHHHHHHHHhhcCCEEEEeCC
Confidence 1237999865332 24467888899999999887443
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.84 E-value=0.012 Score=47.17 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=62.8
Q ss_pred cCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+| .|.|..+..+++.. +.+|++++.+++..+.+++ .+.. . .+..+..+..+.+...
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~----- 204 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW--Q-VINYREEDLVERLKEI----- 204 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--E-EEECCCccHHHHHHHH-----
Confidence 3467999998 46777777777764 4689999999888777665 2331 1 2222222233332211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.....+|++|-... ...++.+.+.|+++|.++.-.
T Consensus 205 -~~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 205 -TGGKKVRVVYDSVG----RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp -TTTCCEEEEEECSC----GGGHHHHHHTEEEEEEEEECC
T ss_pred -hCCCCceEEEECCc----hHHHHHHHHHhcCCCEEEEEe
Confidence 01246999876554 245678889999999888644
No 357
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.82 E-value=0.028 Score=45.49 Aligned_cols=102 Identities=16% Similarity=0.076 Sum_probs=63.8
Q ss_pred HcCCCEEEEEccc--hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 17 LINAKNTMEIGVF--TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG~g--~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
..+.+++|-+|+| .|..+..+++... +.+|+++|.+++..+.+++ .+.. ..+-..+ .+..+.+...
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~--~~~~~~~-~~~~~~~~~~---- 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD--YVINASM-QDPLAEIRRI---- 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS--EEEETTT-SCHHHHHHHH----
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC--EEecCCC-ccHHHHHHHH----
Confidence 3456899999987 6667777777642 4689999999988777654 3431 1122222 2222222111
Q ss_pred cccCC-CcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYH-GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~-~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.. +.+|++|-... ....++.+++.|+++|.++.-..
T Consensus 236 ---~~~~~~d~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 236 ---TESKGVDAVIDLNN---SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp ---TTTSCEEEEEESCC---CHHHHTTGGGGEEEEEEEEECCS
T ss_pred ---hcCCCceEEEECCC---CHHHHHHHHHHHhcCCEEEEECC
Confidence 12 58999875443 23467788899999998887443
No 358
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.80 E-value=0.018 Score=47.37 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=64.1
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCC---chhHHHHHHhhhhc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP---ALPLLDQLIQDVSS 93 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~~~~~~ 93 (192)
.+.++||-+|+| .|..+..+|+... ..+|++++.+++..+.+++ .|.. .++..+ ..++.+.+...
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~--- 262 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDI--- 262 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHH---
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHH---
Confidence 345799999965 5777888888753 2599999999988776654 4542 223322 22333333211
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-.... ...++.+++.|+++|.++.-..
T Consensus 263 ---~~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 263 ---THGRGADFILEATGD---SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp ---TTTSCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred ---hCCCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEEec
Confidence 012369998654322 2346778889999999887543
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.70 E-value=0.08 Score=42.94 Aligned_cols=95 Identities=11% Similarity=0.089 Sum_probs=59.5
Q ss_pred CEEEEEccc-hhHHH-HHHH-HhCCCCcEEEEEeCCch---hHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 21 KNTMEIGVF-TGYSL-LATA-LAIPDDGKILALDITKE---HYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 21 ~~ileiG~g-~G~~~-~~la-~~~~~~~~v~~vD~~~~---~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
++||-+|+| .|..+ ..+| +... ..+|++++.+++ ..+.+++ .|. +.+.....+..+ +.++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~~~~~~~~~----lGa-~~v~~~~~~~~~-i~~~------- 239 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPDPTIDIIEE----LDA-TYVDSRQTPVED-VPDV------- 239 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSCHHHHHHHH----TTC-EEEETTTSCGGG-HHHH-------
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccHHHHHHHHH----cCC-cccCCCccCHHH-HHHh-------
Confidence 899999974 46677 7777 7653 234999999988 7776654 443 222111112222 3222
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+.+|+||-... ....++.+++.|+++|.++.-..
T Consensus 240 ----~gg~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 240 ----YEQMDFIYEATG---FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp ----SCCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred ----CCCCCEEEECCC---ChHHHHHHHHHHhcCCEEEEEeC
Confidence 237999864332 23467888899999999887543
No 360
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.67 E-value=0.031 Score=45.31 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=63.4
Q ss_pred HcCC--CEEEEEcc--chhHHHHHHHHhCCCCc-EEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhh
Q 029536 17 LINA--KNTMEIGV--FTGYSLLATALAIPDDG-KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDV 91 (192)
Q Consensus 17 ~~~~--~~ileiG~--g~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 91 (192)
..+. ++||-+|+ |.|..+..+++.. +. +|++++.+++..+.+++. .+.. . .+.....+..+.+...
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~-~~d~~~~~~~~~~~~~- 226 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFD--A-AINYKKDNVAEQLRES- 226 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCS--E-EEETTTSCHHHHHHHH-
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCc--e-EEecCchHHHHHHHHh-
Confidence 3456 89999996 5777777777765 45 999999998776655432 3432 1 2222212222222211
Q ss_pred hcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 92 SSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+.+|+++-... ...++.+.+.|+++|.+++-..
T Consensus 227 ------~~~~~d~vi~~~G----~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 227 ------CPAGVDVYFDNVG----GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp ------CTTCEEEEEESCC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred ------cCCCCCEEEECCC----HHHHHHHHHHhccCcEEEEECC
Confidence 1237999875443 2667888999999999887543
No 361
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.66 E-value=0.11 Score=41.82 Aligned_cols=93 Identities=14% Similarity=0.179 Sum_probs=63.1
Q ss_pred hHcCCCEEEEEccch-hHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcc
Q 029536 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSST 94 (192)
Q Consensus 16 ~~~~~~~ileiG~g~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 94 (192)
...+.++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .|.. .+ + .+... +
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~v--~-~~~~~----~------- 231 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVK-HF--Y-TDPKQ----C------- 231 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCS-EE--E-SSGGG----C-------
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCC-ee--c-CCHHH----H-------
Confidence 344578999999874 77888888876 4699999999998887765 4542 22 2 33211 1
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
...+|+||-..... ..++.+++.|+++|.++.-..
T Consensus 232 ----~~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 232 ----KEELDFIISTIPTH---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ----CSCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECCC
T ss_pred ----hcCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEECC
Confidence 33799986433322 136678899999999987543
No 362
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.62 E-value=0.16 Score=41.39 Aligned_cols=98 Identities=10% Similarity=0.014 Sum_probs=61.8
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ +.|..+..+|+.. +.+|+++. +++..+.+++ .|.. .++.....++.+.+...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~----- 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTY----- 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHH-----
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHH-----
Confidence 45678999988 4888999999886 46888874 7777665544 5542 22322222333333211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhcc-CCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELV-KVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L-~~gG~lv~~d 135 (192)
..+.+|+||-... ....++.+++.| +++|.++.-.
T Consensus 228 --t~g~~d~v~d~~g---~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 228 --TKNNLRYALDCIT---NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp --TTTCCCEEEESSC---SHHHHHHHHHHSCTTCEEEEESS
T ss_pred --ccCCccEEEECCC---chHHHHHHHHHhhcCCCEEEEEe
Confidence 1456999764322 245577788888 6999888754
No 363
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.61 E-value=0.036 Score=44.87 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=63.2
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+.++||-+|+| .|..+..+|+... ..+|++++.+++..+.+++ .|.. .++..+..++.+.+... .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~------~ 232 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAKK----VGAD---YVINPFEEDVVKEVMDI------T 232 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHH------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCCC---EEECCCCcCHHHHHHHH------c
Confidence 56789999985 4777788888753 2389999999888777664 3431 12222222222222211 0
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|+||-... ....++.+.+.|+++|.++.-..
T Consensus 233 ~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 233 DGNGVDVFLEFSG---APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp TTSCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEcc
Confidence 1236999875432 24567888899999998887443
No 364
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.60 E-value=0.011 Score=47.13 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=38.7
Q ss_pred CceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc---Cc--------------------HHHHHHHHhccCC
Q 029536 71 HKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD---NY--------------------VNYHKRLIELVKV 127 (192)
Q Consensus 71 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~---~~--------------------~~~~~~~~~~L~~ 127 (192)
.+++++++|+.+.++.+. +++||+|+.|++.. .| ..++..+.++|+|
T Consensus 20 ~~~~i~~gD~~~~l~~l~----------~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~ 89 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFP----------EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVP 89 (297)
T ss_dssp -CEEEEESCHHHHHTTSC----------TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred cCCEEEECcHHHHHhhCC----------CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCC
Confidence 468999999988776552 57999999998731 11 2345677899999
Q ss_pred CeEEEE
Q 029536 128 GGVIGY 133 (192)
Q Consensus 128 gG~lv~ 133 (192)
||.+++
T Consensus 90 ~G~l~i 95 (297)
T 2zig_A 90 GGRLVI 95 (297)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 998765
No 365
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.57 E-value=0.082 Score=42.68 Aligned_cols=95 Identities=22% Similarity=0.183 Sum_probs=61.5
Q ss_pred CCCEEEEEc-c-chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 19 NAKNTMEIG-V-FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG-~-g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
+.++||-+| + +.|..+..+|+.. +.+|++++.+++..+.+++ .|.. . ++..+ .++.+.+...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~-~~~~~~~~~~------ 213 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGAD-I--VLNHK-ESLLNQFKTQ------ 213 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCS-E--EECTT-SCHHHHHHHH------
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCc-E--EEECC-ccHHHHHHHh------
Confidence 568999984 3 4677888888875 4699999999988877765 3432 1 12111 1222222211
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
....+|+||-... ....++.+.+.|+++|.++.
T Consensus 214 -~~~g~Dvv~d~~g---~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 214 -GIELVDYVFCTFN---TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp -TCCCEEEEEESSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCCccEEEECCC---chHHHHHHHHHhccCCEEEE
Confidence 1457998765322 24557888899999999875
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.53 E-value=0.084 Score=36.63 Aligned_cols=92 Identities=15% Similarity=0.053 Sum_probs=54.6
Q ss_pred CCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTKE 96 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~~ 96 (192)
.++++-+|+ |..+..+++.+. .+.+|+++|.+++..+.+++ ..+.++.+|..+. +...
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~--------- 66 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSL--------- 66 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHS---------
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhC---------
Confidence 457899888 556666655542 25689999999987765554 2366778887542 3322
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
.-..+|+|++-.+............+.+. ...++
T Consensus 67 -~~~~~d~vi~~~~~~~~n~~~~~~a~~~~-~~~ii 100 (141)
T 3llv_A 67 -DLEGVSAVLITGSDDEFNLKILKALRSVS-DVYAI 100 (141)
T ss_dssp -CCTTCSEEEECCSCHHHHHHHHHHHHHHC-CCCEE
T ss_pred -CcccCCEEEEecCCHHHHHHHHHHHHHhC-CceEE
Confidence 13578999886653222222333344455 44343
No 367
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.40 E-value=0.21 Score=34.10 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=54.9
Q ss_pred CCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhcccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKE 96 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 96 (192)
..+|+-+|+ |..+..++..+. .+.+|+.+|.+++..+..++ .. .+.++.+|..+ .+...
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~----~~~~~~~d~~~~~~l~~~--------- 65 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EI----DALVINGDCTKIKTLEDA--------- 65 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HC----SSEEEESCTTSHHHHHHT---------
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hc----CcEEEEcCCCCHHHHHHc---------
Confidence 357888887 666666655542 24689999999876654432 11 34566676533 22211
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
.-..+|+|++-.+.......+..+.+.++++-+++
T Consensus 66 -~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 66 -GIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp -TTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred -CcccCCEEEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 13468999987654333334445556677765554
No 368
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.39 E-value=0.036 Score=45.01 Aligned_cols=99 Identities=16% Similarity=0.089 Sum_probs=62.6
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. ..+..+..++.+.+...
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~~----- 234 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQ----NGAH---EVFNHREVNYIDKIKKY----- 234 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTSTTHHHHHHHH-----
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----cCCC---EEEeCCCchHHHHHHHH-----
Confidence 35679999996 6777888888775 5689999999887775543 3432 12222222333333211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.....+|++|-... ...+..+++.|+++|.++.-.
T Consensus 235 -~~~~~~D~vi~~~G----~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 -VGEKGIDIIIEMLA----NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp -HCTTCEEEEEESCH----HHHHHHHHHHEEEEEEEEECC
T ss_pred -cCCCCcEEEEECCC----hHHHHHHHHhccCCCEEEEEe
Confidence 01247999865432 235677889999999888744
No 369
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.37 E-value=0.08 Score=42.74 Aligned_cols=95 Identities=17% Similarity=0.084 Sum_probs=61.0
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ +.|..+..+++.. +.+|+++ .+++..+.+++ .|... +. ...+..+.+....
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~------- 212 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHT------- 212 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHH-------
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHh-------
Confidence 35679999993 5788888888875 5689999 88877666554 45422 22 1122222222221
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
....+|+||-.... +.++.+.+.|+++|.++.-
T Consensus 213 --~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 --AGQGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp --TTSCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred --cCCCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 13579987653332 4677888999999998864
No 370
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.36 E-value=0.034 Score=44.87 Aligned_cols=100 Identities=10% Similarity=0.074 Sum_probs=64.1
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. . ++.....++.+.+...
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~-~--~~d~~~~~~~~~~~~~----- 230 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGAD-E--TVNYTHPDWPKEVRRL----- 230 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS-E--EEETTSTTHHHHHHHH-----
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC-E--EEcCCcccHHHHHHHH-----
Confidence 34679999997 6788888888875 4699999999988877754 3432 1 2222222222222211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|+||-... . ..++.+.+.|+++|.++.-..
T Consensus 231 -~~~~~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 231 -TGGKGADKVVDHTG-A---LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp -TTTTCEEEEEESSC-S---SSHHHHHHHEEEEEEEEESSC
T ss_pred -hCCCCceEEEECCC-H---HHHHHHHHhhccCCEEEEEec
Confidence 01247999876554 2 236677889999998887443
No 371
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.25 E-value=0.15 Score=41.38 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=52.5
Q ss_pred CEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCC
Q 029536 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHG 100 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 100 (192)
-+++|+.||.|+.++-+..+.-....+.++|+++.+.+.-+.|+. ...++.+|..+....-.. ..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~---------~~ 68 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIK---------KW 68 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHH---------HT
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhc---------cC
Confidence 479999999999999887663112468899999988887777663 334667887665332111 23
Q ss_pred cccEEEEeCC
Q 029536 101 TFDFVFVDAD 110 (192)
Q Consensus 101 ~~D~v~id~~ 110 (192)
.+|+++...+
T Consensus 69 ~~D~l~ggpP 78 (333)
T 4h0n_A 69 NVDTILMSPP 78 (333)
T ss_dssp TCCEEEECCC
T ss_pred CCCEEEecCC
Confidence 6899987654
No 372
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.14 E-value=0.036 Score=44.75 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=61.5
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCc-EEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDG-KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
+.++||-+|+| .|..+..+|+.. +. +|++++.+++..+.+++. . +. ++.....++.+.+.+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-----~~--v~~~~~~~~~~~~~~~------ 227 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-----DR--LVNPLEEDLLEVVRRV------ 227 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-----SE--EECTTTSCHHHHHHHH------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-----Hh--ccCcCccCHHHHHHHh------
Confidence 66889999975 477777888875 45 899999998887766552 1 11 2222111222222111
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
....+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 228 -~~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 228 -TGSGVEVLLEFSG---NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp -HSSCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred -cCCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 0346999865332 2456778889999999888644
No 373
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.03 E-value=0.086 Score=42.81 Aligned_cols=98 Identities=16% Similarity=0.104 Sum_probs=62.3
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch-hHHHHHHhhhhcc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL-PLLDQLIQDVSST 94 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~ 94 (192)
..+.++||-+|+| .|..+..+|+.. +.+|++++.+++..+.+++ .|.. . ++..... ++.+.+
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~--v~~~~~~~~~~~~~------- 240 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD-H--YIATLEEGDWGEKY------- 240 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS-E--EEEGGGTSCHHHHS-------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC-E--EEcCcCchHHHHHh-------
Confidence 3456899999975 477778888775 4689999999998887765 3432 1 2222111 233332
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.+.+|+||-..... ....++.+++.|+++|.++.-.
T Consensus 241 ----~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 ----FDTFDLIVVCASSL-TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp ----CSCEEEEEECCSCS-TTCCTTTGGGGEEEEEEEEECC
T ss_pred ----hcCCCEEEECCCCC-cHHHHHHHHHHhcCCCEEEEec
Confidence 25799986543320 0123456778999999988644
No 374
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.91 E-value=0.12 Score=37.61 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=54.1
Q ss_pred CEEEEEccchhHHHHHHHHhCC-C-CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhcccc
Q 029536 21 KNTMEIGVFTGYSLLATALAIP-D-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKE 96 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 96 (192)
.+|+-+|+ |..+..+++.+. . +..|+++|.+++..+.+++ . .+..+.+|..+ .+....
T Consensus 40 ~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~-------- 101 (183)
T 3c85_A 40 AQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERIL-------- 101 (183)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBC--------
T ss_pred CcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhcc--------
Confidence 47888887 555555555443 2 4579999999987665443 2 34466677643 222210
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.-..+|+|++-.+........-...+.+.|+..++.
T Consensus 102 -~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 102 -DTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp -SCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred -CCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 034689998855432222222234456676776665
No 375
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.91 E-value=0.078 Score=43.00 Aligned_cols=100 Identities=6% Similarity=-0.037 Sum_probs=62.5
Q ss_pred cCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+| .|.|..+..+++.. +.+|++++.+++..+.+++ .+.. . .+..+..++.+.+...
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~----- 226 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGAA--A-GFNYKKEDFSEATLKF----- 226 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCc--E-EEecCChHHHHHHHHH-----
Confidence 3467899998 46777788888765 5799999999888777643 3432 1 2222222233332211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.....+|++|-..... .++.+.+.|+++|.++.-..
T Consensus 227 -~~~~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 227 -TKGAGVNLILDCIGGS----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp -TTTSCEEEEEESSCGG----GHHHHHHHEEEEEEEEECCC
T ss_pred -hcCCCceEEEECCCch----HHHHHHHhccCCCEEEEEec
Confidence 0124799987654332 36677889999999887543
No 376
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.78 E-value=0.13 Score=40.65 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=62.2
Q ss_pred HcCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc-hhHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~ 93 (192)
..+.++||-+|+ +.|..+..+++.. +.+|++++.+++..+.+++ .|.. ..+.... .++.+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~------- 186 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKA------- 186 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHH-------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHH-------
Confidence 345689999997 5788888888875 4699999999888776654 3432 1222211 222222
Q ss_pred ccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
-..+|+||- ... ..++.+.+.|+++|.++.-.
T Consensus 187 -----~~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 187 -----WGGLDLVLE-VRG----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -----TTSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC-
T ss_pred -----hcCceEEEE-CCH----HHHHHHHHhhccCCEEEEEe
Confidence 247999876 543 35678889999999888643
No 377
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.76 E-value=0.15 Score=42.60 Aligned_cols=103 Identities=13% Similarity=0.038 Sum_probs=63.6
Q ss_pred HcCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc--------------
Q 029536 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-------------- 80 (192)
Q Consensus 17 ~~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-------------- 80 (192)
..+.++||-+|+ +.|..+..+|+.. +.++++++.+++..+.+++ .|...-+.....+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchh
Confidence 345679999986 5788888888875 5789999998887776654 45432121111111
Q ss_pred -hhHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 81 -LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+.+.+... ....+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 292 ~~~~~~~v~~~-------~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 292 GRKLAKLVVEK-------AGREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHH-------HSSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESCC
T ss_pred hhHHHHHHHHH-------hCCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEec
Confidence 0011222111 13579998654332 457788899999999987543
No 378
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.72 E-value=0.24 Score=40.29 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=59.2
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+.++||-+|+| .|..+..+|+.. +.+|++++.+++..+.+++ +.|.. .++.....+.+.+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~---------- 248 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAA---------- 248 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHT----------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHh----------
Confidence 56789999875 466777778775 4689999999887766553 34432 22222222333322
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.+.+|+||-...... .++.+++.|+++|.++.-.
T Consensus 249 -~~~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 249 -AGTLDGIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp -TTCEEEEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred -hCCCCEEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 347999875443221 1345667889999888644
No 379
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.59 E-value=0.28 Score=34.52 Aligned_cols=97 Identities=8% Similarity=0.013 Sum_probs=58.7
Q ss_pred CCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCc-hhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITK-EHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTK 95 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 95 (192)
.++++-+|+ |..+..+++.+. .+..|+.+|.++ +..+...+.. ...+.++.+|..+ .+...
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a-------- 67 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA-------- 67 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH--------
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc--------
Confidence 457888876 666676665553 246899999974 4444333322 1357888998754 33322
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.-...|.|++-.+............+.+.|...++.
T Consensus 68 --~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 68 --GIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp --TTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred --ChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 135789998876544334444455566766665554
No 380
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.49 E-value=0.3 Score=34.45 Aligned_cols=99 Identities=12% Similarity=-0.012 Sum_probs=54.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
...++|+-+|+ |..+..++..+. .+.+|+.+|.+++..+.+++ . ..+.++.+|..+. ..+...
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~-~~l~~~------ 80 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEF-ETLKEC------ 80 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSH-HHHHTT------
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCH-HHHHHc------
Confidence 34578999987 555555554432 24689999999876654331 1 2345666765432 112110
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.-..+|+|++-............+.+.+.+...++.
T Consensus 81 -~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 81 -GMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp -TGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred -CcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 024689998866543333334444454555555554
No 381
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.42 E-value=0.24 Score=41.26 Aligned_cols=94 Identities=15% Similarity=0.012 Sum_probs=60.8
Q ss_pred CCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhcccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKE 96 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 96 (192)
..+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++.+++ . .+.++.+|+.+ .+....
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~ag-------- 65 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAG-------- 65 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTT--------
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcC--------
Confidence 457888887 555555555442 25689999999998887664 2 35578888754 343321
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
-...|+|++-.+.......+-...+.+.|+..++.
T Consensus 66 --i~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 66 --AAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp --TTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred --CCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 45789988876644334444555677788865554
No 382
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.39 E-value=0.16 Score=41.25 Aligned_cols=96 Identities=15% Similarity=0.204 Sum_probs=59.8
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+.++||-+|+| .|..+..+|+.. +.+|++++.+++..+.+++ +.|.. . ++..+..+.+.+.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~-~--vi~~~~~~~~~~~---------- 241 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGAD-D--YVIGSDQAKMSEL---------- 241 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCS-C--EEETTCHHHHHHS----------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCc-e--eeccccHHHHHHh----------
Confidence 56899999876 566777788775 4689999999887765552 34542 2 2222222222222
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+.+|+||--..... .++.+++.|+++|.++.-..
T Consensus 242 -~~g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 242 -ADSLDYVIDTVPVHH---ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp -TTTEEEEEECCCSCC---CSHHHHTTEEEEEEEEECSC
T ss_pred -cCCCCEEEECCCChH---HHHHHHHHhccCCEEEEeCC
Confidence 347999864333221 24556789999999887543
No 383
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.27 E-value=1.1 Score=34.36 Aligned_cols=83 Identities=6% Similarity=-0.009 Sum_probs=50.5
Q ss_pred cCCCEEEEEccchh-HHHHHHHHhC-CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh------HHHHHHh
Q 029536 18 INAKNTMEIGVFTG-YSLLATALAI-PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP------LLDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~g~G-~~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~~ 89 (192)
.+.+++|-.|++.+ +.+..+++.+ ..+.+|+.++.+++..+.+.+.....+- .++.++..|..+ .++.+..
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 35688999986521 1233333322 1267899999988777776666655443 378888888653 2222222
Q ss_pred hhhcccccCCCcccEEEEeC
Q 029536 90 DVSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~ 109 (192)
. .+++|.++..+
T Consensus 84 ~--------~g~id~li~~A 95 (266)
T 3oig_A 84 Q--------VGVIHGIAHCI 95 (266)
T ss_dssp H--------HSCCCEEEECC
T ss_pred H--------hCCeeEEEEcc
Confidence 2 35789888764
No 384
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.27 E-value=0.08 Score=42.31 Aligned_cols=93 Identities=8% Similarity=0.018 Sum_probs=58.2
Q ss_pred EEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc-hhHHHHHHhhhhcccccC
Q 029536 22 NTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 22 ~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~~~~~ 98 (192)
+||-+|+ +.|..+..+|+.. +.++++++.+++..+.+++ .|.. .+ +-..+. .+....+ .
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~-~~-i~~~~~~~~~~~~~----------~ 213 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAK-EV-LAREDVMAERIRPL----------D 213 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCS-EE-EECC---------C----------C
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCc-EE-EecCCcHHHHHHHh----------c
Confidence 7999996 6788888888876 4689999999888777654 4442 11 111111 1111111 1
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
...+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 214 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 214 KQRWAAAVDPVGG----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp SCCEEEEEECSTT----TTHHHHHHTEEEEEEEEECSC
T ss_pred CCcccEEEECCcH----HHHHHHHHhhccCCEEEEEee
Confidence 3479987643332 246778899999999887543
No 385
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=94.23 E-value=0.55 Score=36.88 Aligned_cols=85 Identities=21% Similarity=0.302 Sum_probs=51.9
Q ss_pred HHHHHhHcCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh------H
Q 029536 11 FSMLLKLINAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP------L 83 (192)
Q Consensus 11 l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~ 83 (192)
+..+....+.|.+|-.|.+.| .++.+|+.+. .+++|+.+|.+++.++.+.+.+ + .++..+..|..+ .
T Consensus 20 ~~~Ms~rL~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~ 93 (273)
T 4fgs_A 20 FQSMTQRLNAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRL 93 (273)
T ss_dssp -----CTTTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHH
T ss_pred hhhhcchhCCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHH
Confidence 333444567889999987655 4444444432 3689999999988776554433 3 467778888643 2
Q ss_pred HHHHHhhhhcccccCCCcccEEEEeC
Q 029536 84 LDQLIQDVSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~D~v~id~ 109 (192)
.+....+ .++.|+++..+
T Consensus 94 ~~~~~~~--------~G~iDiLVNNA 111 (273)
T 4fgs_A 94 YEKVKAE--------AGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHH--------HSCEEEEEECC
T ss_pred HHHHHHH--------cCCCCEEEECC
Confidence 2333222 46899988765
No 386
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.15 E-value=0.14 Score=43.02 Aligned_cols=103 Identities=16% Similarity=0.061 Sum_probs=63.4
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc--------------h
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--------------L 81 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--------------~ 81 (192)
.+.++||-+|+ +.|..+..+|+.. +.++++++.+++..+.+++ .|...-+.....|. .
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHHHH
Confidence 45678999986 5788888888876 5789999988888777754 44421111111111 0
Q ss_pred hHHHHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 82 PLLDQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
.+.+.+... .....+|+||-... .+.++.+.+.|+++|.+++-..
T Consensus 301 ~~~~~i~~~------t~g~g~Dvvid~~G----~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 301 RFGKRIREL------TGGEDIDIVFEHPG----RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHH------HTSCCEEEEEECSC----HHHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHH------hCCCCCcEEEEcCC----chhHHHHHHHhhCCcEEEEEec
Confidence 111222111 01357998764332 2567888899999999987543
No 387
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.13 E-value=1.5 Score=33.65 Aligned_cols=80 Identities=10% Similarity=0.112 Sum_probs=53.9
Q ss_pred cCCCEEEEEcc----chhHH-HHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh------HHHH
Q 029536 18 INAKNTMEIGV----FTGYS-LLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP------LLDQ 86 (192)
Q Consensus 18 ~~~~~ileiG~----g~G~~-~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~ 86 (192)
.+.|.+|-.|. |.|.. +..|++. +++|+.++.+++..+.+.+.+++.+- .++.++..|..+ .++.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHH
Confidence 46789999984 45543 3334433 68999999999988888887776553 468888888643 2223
Q ss_pred HHhhhhcccccCCCcccEEEEeC
Q 029536 87 LIQDVSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 87 ~~~~~~~~~~~~~~~~D~v~id~ 109 (192)
...+ .++.|.++.+.
T Consensus 80 ~~~~--------~G~iD~lvnnA 94 (256)
T 4fs3_A 80 IGKD--------VGNIDGVYHSI 94 (256)
T ss_dssp HHHH--------HCCCSEEEECC
T ss_pred HHHH--------hCCCCEEEecc
Confidence 3222 46899888664
No 388
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.12 E-value=0.27 Score=40.35 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=57.8
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++++|+-+|+| .|.....++..+ +.+|+++|.+++..+.+++.+ +. .+.....+..+ +.+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~-l~~~--------- 228 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYE-LEGA--------- 228 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHH-HHHH---------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHH-HHHH---------
Confidence 467899999985 444455555554 458999999998776665433 22 22222222222 2222
Q ss_pred cCCCcccEEEEeCC-Cc--CcHHHHHHHHhccCCCeEEEEeC
Q 029536 97 KYHGTFDFVFVDAD-KD--NYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 97 ~~~~~~D~v~id~~-~~--~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
-...|+|+.... +. ...-+.+...+.+++||+|+--.
T Consensus 229 --l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 229 --VKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp --HHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred --HcCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 125799887432 11 11112345678899999887544
No 389
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.10 E-value=0.78 Score=34.56 Aligned_cols=94 Identities=13% Similarity=-0.010 Sum_probs=59.8
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhcccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 96 (192)
..++++-+|+ |..+..+++.+...+.|+.+|.+++.++.++ ..+.++.+|+.+ .+...
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a--------- 67 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA--------- 67 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT---------
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc---------
Confidence 3468998887 7888888888753333999999988765443 147788998754 33322
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.-...|.|++-.+............+.+.++..++.
T Consensus 68 -~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 68 -NVRGARAVIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp -TCTTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred -CcchhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 135789998866543333344455566788755554
No 390
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.99 E-value=0.4 Score=39.09 Aligned_cols=100 Identities=12% Similarity=0.123 Sum_probs=59.3
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++++|+-+|+| .|..+..++..+ +.+|+.+|.+++..+.+++.... .+.....+..++.+.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~--------- 228 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV--------- 228 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH---------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH---------
Confidence 456899999985 444555566655 35999999999888777665432 2333333333332222
Q ss_pred cCCCcccEEEEeCCCcC--cHH-HHHHHHhccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADKDN--YVN-YHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~--~~~-~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+|+|+--..... ... ..+...+.+++||+++.--.
T Consensus 229 ---~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 229 ---AEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp ---HTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred ---cCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 25899865433211 001 13445678999998875433
No 391
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.91 E-value=0.14 Score=41.38 Aligned_cols=75 Identities=8% Similarity=-0.077 Sum_probs=52.4
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCCCcEE-EEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHH-HHhhhhcccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPDDGKI-LALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ-LIQDVSSTKE 96 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~~~~v-~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~~ 96 (192)
++-+++|+.||.|+.++-+..+.-....+ .++|+++.+.+..+.|+... ++.+|..+.... +.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~-------- 73 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE-------- 73 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH--------
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc--------
Confidence 34589999999999999887752112456 79999999998888887321 456776654332 21
Q ss_pred cCCCcccEEEEeCC
Q 029536 97 KYHGTFDFVFVDAD 110 (192)
Q Consensus 97 ~~~~~~D~v~id~~ 110 (192)
...+|+++...+
T Consensus 74 --~~~~Dil~ggpP 85 (327)
T 3qv2_A 74 --SLNCNTWFMSPP 85 (327)
T ss_dssp --HTCCCEEEECCC
T ss_pred --cCCCCEEEecCC
Confidence 236899987765
No 392
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.80 E-value=0.24 Score=40.74 Aligned_cols=108 Identities=12% Similarity=0.011 Sum_probs=72.8
Q ss_pred HHHHHHHHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCC-ceEEEeCCchhHHH
Q 029536 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLD 85 (192)
Q Consensus 7 ~~~~l~~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~ 85 (192)
..-+|..+.......+||.++-+.|..+++++.. .++.+.-|--.....+.|++..++++ .+++...-.
T Consensus 26 d~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~----- 95 (375)
T 4dcm_A 26 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA----- 95 (375)
T ss_dssp HHHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-----
T ss_pred HHHHHHhhhhccCCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-----
Confidence 3344555443334468999999999999988743 23555444445556778899888864 477754421
Q ss_pred HHHhhhhcccccCCCcccEEEEeCCCc--CcHHHHHHHHhccCCCeEEEEeC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDADKD--NYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~~~--~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
.. ...||+|++..++. .....+..+...|++|+.|++..
T Consensus 96 ~~-----------~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 96 DY-----------PQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CC-----------CSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred cc-----------ccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 11 56899999987743 34556778889999999887643
No 393
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.66 E-value=1.3 Score=34.63 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=49.5
Q ss_pred cCCCEEEEEccchh-HHHHHHHHhC-CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHh
Q 029536 18 INAKNTMEIGVFTG-YSLLATALAI-PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~g~G-~~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 89 (192)
.+.+++|-.|++.| +.+..+++.+ ..+.+|+.++.+++..+.+++.....+ ++.++..|..+. .+...+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 46789999996522 2333333332 125789999998766555555554443 578888886542 222222
Q ss_pred hhhcccccCCCcccEEEEeCC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~ 110 (192)
+ .+++|+++..+.
T Consensus 106 ~--------~g~iD~lVnnAG 118 (293)
T 3grk_A 106 K--------WGKLDFLVHAIG 118 (293)
T ss_dssp H--------TSCCSEEEECCC
T ss_pred h--------cCCCCEEEECCc
Confidence 2 468999987654
No 394
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.60 E-value=0.13 Score=43.22 Aligned_cols=49 Identities=16% Similarity=0.165 Sum_probs=39.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC----CCcEEEEEeCCchhHHHHHHHHHH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKEHYEKGLPIIQK 66 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~----~~~~v~~vD~~~~~~~~a~~~~~~ 66 (192)
..+-+|+|+|.|.|..+..+++.+. ...+++.||+||...+.-++.+..
T Consensus 136 ~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 136 SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3467999999999999888876652 124899999999999888888764
No 395
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.55 E-value=0.3 Score=41.60 Aligned_cols=59 Identities=3% Similarity=-0.224 Sum_probs=43.0
Q ss_pred CEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHH
Q 029536 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 84 (192)
-+++|+.||.|+.++-+..+. -..+.++|+++.+.+.-+.|+ +..+...++.+|..++.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG--~~~v~avE~d~~A~~ty~~N~---~~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIG--GQCVFTSEWNKHAVRTYKANH---YCDPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTT--EEEEEEECCCHHHHHHHHHHS---CCCTTTCEEESCTHHHH
T ss_pred ceEEEecCCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhc---ccCCCcceeccchhhhh
Confidence 489999999999998887641 245899999998777666654 22234556778887664
No 396
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.48 E-value=0.12 Score=41.79 Aligned_cols=96 Identities=10% Similarity=0.029 Sum_probs=54.5
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ +.|..+..+|+... ..+|++++ +++..+.++ .|.. .++. ...++.+.+...
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~---~~~~-~~~~~~~~~~~~----- 204 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVT---HLFD-RNADYVQEVKRI----- 204 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSS---EEEE-TTSCHHHHHHHH-----
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCc---EEEc-CCccHHHHHHHh-----
Confidence 45679999987 46778888887754 56888888 554444333 3432 1222 222333333211
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
..+.+|+||-..... .++.+++.|+++|.+++-.
T Consensus 205 --~~~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 205 --SAEGVDIVLDCLCGD----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp --CTTCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred --cCCCceEEEECCCch----hHHHHHHHhhcCCEEEEEC
Confidence 145899887543322 2367889999999888644
No 397
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.45 E-value=0.28 Score=39.27 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=56.1
Q ss_pred CEEEEEccchhHHHHHHHHhCC-CCc--EEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 21 KNTMEIGVFTGYSLLATALAIP-DDG--KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~-~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
++|.-||+| ..+..++..+. .+. +|+++|.+++.++.+++ .|... . ...+..+. .
T Consensus 34 ~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~--~-~~~~~~~~---~---------- 91 (314)
T 3ggo_A 34 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKV---E---------- 91 (314)
T ss_dssp SEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCTTGG---G----------
T ss_pred CEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc--h-hcCCHHHH---h----------
Confidence 689999975 44444443332 123 89999999987766553 34311 1 12333220 1
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
-...|+||+..+.....+.++.+.+.++++.+|+
T Consensus 92 -~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 92 -DFSPDFVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp -GGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred -hccCCEEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 2357999998776667788888888899888665
No 398
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.43 E-value=0.62 Score=35.88 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=47.9
Q ss_pred CCCEEEEEccc-hhHHHHH-HHHhCCCCcEEEEEeCCc-------------------hhHHHHHHHHHHcCCCCceEEEe
Q 029536 19 NAKNTMEIGVF-TGYSLLA-TALAIPDDGKILALDITK-------------------EHYEKGLPIIQKAGVAHKIDFRE 77 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~-la~~~~~~~~v~~vD~~~-------------------~~~~~a~~~~~~~~~~~~v~~~~ 77 (192)
+..+|+-+|+| .|..... |+.. . -++++.+|.+. ...+.+.+.+...+..-+++.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~-G-v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASA-G-VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHc-C-CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 45789999986 3332222 3332 2 36899999987 66777777777655434566666
Q ss_pred CCchh-HHHHHHhhhhcccccCCCcccEEEEeCC
Q 029536 78 GPALP-LLDQLIQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 78 ~d~~~-~~~~~~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
.+..+ .+..+ -..+|+|+.-.+
T Consensus 108 ~~~~~~~~~~~-----------~~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDDAELAAL-----------IAEHDLVLDCTD 130 (249)
T ss_dssp SCCCHHHHHHH-----------HHTSSEEEECCS
T ss_pred ccCCHhHHHHH-----------HhCCCEEEEeCC
Confidence 55432 22222 236899876554
No 399
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.43 E-value=0.3 Score=39.63 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=58.3
Q ss_pred CCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCc---hhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 20 AKNTMEIGVF-TGYSLLATALAIPDDGKILALDITK---EHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 20 ~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.++||-+|+| .|..+..+++.. +.+|++++.++ +..+.+++ .|. +.+ ..+ ++.+.+...
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga-~~v---~~~--~~~~~~~~~----- 243 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKT-NYY---NSS--NGYDKLKDS----- 243 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTC-EEE---ECT--TCSHHHHHH-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCC-cee---chH--HHHHHHHHh-----
Confidence 7899999974 355666677664 46999999998 66665554 343 222 111 222222111
Q ss_pred ccCCCcccEEEEeCCCcCcHHHH-HHHHhccCCCeEEEEeCc
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYH-KRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~-~~~~~~L~~gG~lv~~d~ 136 (192)
...+|+||-..... ..+ +.+.+.|+++|.++.-..
T Consensus 244 ---~~~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 244 ---VGKFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp ---HCCEEEEEECCCCC---THHHHHHGGGEEEEEEEEECSC
T ss_pred ---CCCCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEec
Confidence 35799987544322 235 778899999998887544
No 400
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.39 E-value=0.39 Score=38.32 Aligned_cols=94 Identities=14% Similarity=-0.043 Sum_probs=61.6
Q ss_pred EEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCc
Q 029536 22 NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGT 101 (192)
Q Consensus 22 ~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 101 (192)
++||+-||.|+.++-+-.+. -..+.++|+++.+.+.-+.|+. -.++.+|..++...- -..
T Consensus 2 kvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~-----------~~~ 61 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDE-----------FPK 61 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGG-----------SCC
T ss_pred eEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhh-----------CCc
Confidence 68999999999998877652 3467899999998877776641 356788886653221 346
Q ss_pred ccEEEEeCC-------------CcCcHHHH---HHHHhccCCCeEEEEeCc
Q 029536 102 FDFVFVDAD-------------KDNYVNYH---KRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 102 ~D~v~id~~-------------~~~~~~~~---~~~~~~L~~gG~lv~~d~ 136 (192)
.|+++...+ .+.....+ -.+.+.++|. ++++.|+
T Consensus 62 ~D~l~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV 111 (331)
T 3ubt_Y 62 CDGIIGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENV 111 (331)
T ss_dssp CSEEECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEEC
T ss_pred ccEEEecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeee
Confidence 898876543 11111222 2345677886 5556776
No 401
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=93.37 E-value=0.78 Score=36.64 Aligned_cols=93 Identities=14% Similarity=0.036 Sum_probs=60.3
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhccccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTKEK 97 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~~~ 97 (192)
.++++-+|+ |..+..+++.+...+.++.+|.+++..+ +++ ..+.++.+|+.+. +.+.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a---------- 173 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA---------- 173 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT----------
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc----------
Confidence 458888776 7788888877743333999999998876 543 3578899998643 3322
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.-...|.+++..+.+...-..-...+.+.|...++.
T Consensus 174 ~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 174 NVRGARAVIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp CSTTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred ChhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 145789888866543333333445567778765554
No 402
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=93.29 E-value=0.97 Score=34.49 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=51.9
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh------HHHHHH
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP------LLDQLI 88 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~ 88 (192)
..+.+++|-.|++ +|..+..+++.+. .+.+|+.++.+++..+.+++.....+ ++.++..|..+ .++.+.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHH
Confidence 3457899999864 2444555554432 35789999998776666666555543 47788888654 222222
Q ss_pred hhhhcccccCCCcccEEEEeCC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~ 110 (192)
.. .++.|+++..+.
T Consensus 88 ~~--------~g~id~lv~nAg 101 (271)
T 3ek2_A 88 TH--------WDSLDGLVHSIG 101 (271)
T ss_dssp HH--------CSCEEEEEECCC
T ss_pred HH--------cCCCCEEEECCc
Confidence 22 468899987653
No 403
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.25 E-value=0.47 Score=39.20 Aligned_cols=42 Identities=26% Similarity=0.296 Sum_probs=33.2
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHH
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLP 62 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~ 62 (192)
++.+|+-+|+| .|..+..++..+ +.+|+++|.++...+.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 67899999997 566666677666 4689999999988777665
No 404
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.23 E-value=1.5 Score=33.78 Aligned_cols=106 Identities=18% Similarity=0.210 Sum_probs=63.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCC------------chhHHHHHHHHHHcCCCCceEEEeCCchhH-
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDIT------------KEHYEKGLPIIQKAGVAHKIDFREGPALPL- 83 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 83 (192)
.+.+++|-.|++. ..+..+++.+. .+.+|+.+|.+ .+.++.+...+...+ .++.++..|..+.
T Consensus 8 l~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 3567889888754 44555554442 36789999987 555555555555543 5788899886542
Q ss_pred -----HHHHHhhhhcccccCCCcccEEEEeCCC---------cCcH-----------HHHHHHHhccCCCeEEEEe
Q 029536 84 -----LDQLIQDVSSTKEKYHGTFDFVFVDADK---------DNYV-----------NYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 84 -----~~~~~~~~~~~~~~~~~~~D~v~id~~~---------~~~~-----------~~~~~~~~~L~~gG~lv~~ 134 (192)
+.....+ .+++|+++..+.. +.+. ...+.+.+.++.+|.|+.-
T Consensus 85 ~v~~~~~~~~~~--------~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 85 AVSRELANAVAE--------FGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHH--------HSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHH--------cCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 2222222 3578998876541 1111 1234456777788877653
No 405
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.21 E-value=0.47 Score=38.62 Aligned_cols=97 Identities=16% Similarity=0.082 Sum_probs=59.7
Q ss_pred cCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+| .+.|..+..+|+.. +.+|++++ +++..+.++ +.|.. .++..+..++.+.+..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~------ 245 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKS------ 245 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHT------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhh------
Confidence 4567999998 45788888888876 46899988 666655543 44542 1222222233333321
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
...+|+||-..... ...++..++.|+++|.++.-.
T Consensus 246 ---~~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 246 ---LKPFDFILDNVGGS--TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ---SCCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEESC
T ss_pred ---cCCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEeC
Confidence 35799986433221 234567788999999888643
No 406
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.20 E-value=0.066 Score=42.69 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=60.7
Q ss_pred EEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCC
Q 029536 22 NTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYH 99 (192)
Q Consensus 22 ~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 99 (192)
+||-+|+ +.|..+..+|+.. +.+|++++.+++..+.+++ .|.. .+ +-..+. +....+ ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~v-i~~~~~-~~~~~~----------~~ 209 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGAN-RI-LSRDEF-AESRPL----------EK 209 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCS-EE-EEGGGS-SCCCSS----------CC
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCC-EE-EecCCH-HHHHhh----------cC
Confidence 4999886 6888899999886 4699999999998887765 3432 11 111111 111111 14
Q ss_pred CcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 100 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 100 ~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+.+|+|| |..- .+.++.+++.|+++|.++.-..
T Consensus 210 ~~~d~v~-d~~g---~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 210 QLWAGAI-DTVG---DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp CCEEEEE-ESSC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCccEEE-ECCC---cHHHHHHHHHHhcCCEEEEEec
Confidence 5789865 4432 2378889999999999887543
No 407
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.19 E-value=0.62 Score=38.01 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=56.9
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++++|+-+|+| .|..+..++..+ +.+|+++|.+++..+.+++.+ +. .+.....+..+ +.+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~-l~~~--------- 226 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEAN-IKKS--------- 226 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHH-HHHH---------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHH-HHHH---------
Confidence 457899999984 344444445444 469999999988776554422 32 23333333322 2222
Q ss_pred cCCCcccEEEEeCCCcC--c-HHHHHHHHhccCCCeEEEEeCc
Q 029536 97 KYHGTFDFVFVDADKDN--Y-VNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~--~-~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
-...|+|+....... . .-+.+...+.+++||+|+.-..
T Consensus 227 --~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 227 --VQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp --HHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-
T ss_pred --HhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEec
Confidence 135799876544221 1 1123566788999998875443
No 408
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.13 E-value=0.71 Score=37.07 Aligned_cols=97 Identities=8% Similarity=-0.104 Sum_probs=58.5
Q ss_pred CEEEEE-cc-chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccC
Q 029536 21 KNTMEI-GV-FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKY 98 (192)
Q Consensus 21 ~~ilei-G~-g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 98 (192)
+.+|-. |+ +.|..+..+|+.. +.+|++++.+++..+.+++ .|.. .++..+..++.+.+.... .
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~------~ 230 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAA---HVLNEKAPDFEATLREVM------K 230 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCS---EEEETTSTTHHHHHHHHH------H
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC---EEEECCcHHHHHHHHHHh------c
Confidence 566654 33 3677777788775 4699999999998887764 3432 223322223333322110 0
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
...+|+||-... ...++.+++.|+++|.++.-..
T Consensus 231 ~~g~D~vid~~g----~~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 231 AEQPRIFLDAVT----GPLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp HHCCCEEEESSC----HHHHHHHHHHSCTTCEEEECCC
T ss_pred CCCCcEEEECCC----ChhHHHHHhhhcCCCEEEEEec
Confidence 236998764332 2234678899999999987543
No 409
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.12 E-value=0.46 Score=35.50 Aligned_cols=93 Identities=13% Similarity=0.003 Sum_probs=57.7
Q ss_pred EEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcccccC
Q 029536 22 NTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTKEKY 98 (192)
Q Consensus 22 ~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~~~~ 98 (192)
+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++...+. ..+.++.+|+.+. +... .
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a----------~ 62 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA----------E 62 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH----------T
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc----------C
Confidence 4677775 677777766553 256899999999877654321 1466888887543 3322 1
Q ss_pred CCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 99 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 99 ~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
-...|+|++-.+............+.+.+...++.
T Consensus 63 i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 63 VSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred cccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 35789998876544444444455555556665554
No 410
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=93.09 E-value=0.34 Score=39.13 Aligned_cols=105 Identities=6% Similarity=-0.007 Sum_probs=57.7
Q ss_pred CC-CEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc---hhHHHHHHhhhh
Q 029536 19 NA-KNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA---LPLLDQLIQDVS 92 (192)
Q Consensus 19 ~~-~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~ 92 (192)
+. ++||-+|+ +.|..+..+|+.. +.+++++..+++..+..++.+++.|.. . ++..+. .++.+.+...
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~-~--vi~~~~~~~~~~~~~i~~~-- 238 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGAT-Q--VITEDQNNSREFGPTIKEW-- 238 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCS-E--EEEHHHHHCGGGHHHHHHH--
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCe-E--EEecCccchHHHHHHHHHH--
Confidence 45 88999885 5788888888875 467888776655422222334455642 1 222111 1222222110
Q ss_pred cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 93 STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+. .....+|+||-.... .... .+++.|+++|.++.-..
T Consensus 239 -t~-~~~~g~Dvvid~~G~---~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 239 -IK-QSGGEAKLALNCVGG---KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp -HH-HHTCCEEEEEESSCH---HHHH-HHHHTSCTTCEEEECCC
T ss_pred -hh-ccCCCceEEEECCCc---hhHH-HHHHHhccCCEEEEecC
Confidence 00 003479998643321 2223 66799999999887543
No 411
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.97 E-value=1.7 Score=33.93 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=49.5
Q ss_pred CCCEEEEEccch-hHHHHHHHHhC-CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 19 NAKNTMEIGVFT-GYSLLATALAI-PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 19 ~~~~ileiG~g~-G~~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
+.+++|-.|++. ...+..+++.+ ..+.+|+.++.+++..+...+.....+ ++.++..|..+. ++...++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899998742 23333444333 126789999999877666666555543 367788886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.+++|+++..+.
T Consensus 106 --------~g~iD~lVnnAG 117 (296)
T 3k31_A 106 --------WGSLDFVVHAVA 117 (296)
T ss_dssp --------HSCCSEEEECCC
T ss_pred --------cCCCCEEEECCC
Confidence 357899987653
No 412
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.91 E-value=0.36 Score=38.80 Aligned_cols=75 Identities=15% Similarity=0.167 Sum_probs=49.2
Q ss_pred HHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCc---hhHHHHHHHHHHcCCC---CceEEEeCCc
Q 029536 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITK---EHYEKGLPIIQKAGVA---HKIDFREGPA 80 (192)
Q Consensus 9 ~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~---~~~~~a~~~~~~~~~~---~~v~~~~~d~ 80 (192)
.+++.++.. .+...|||--||+|..+...... +-+.+++|+++ ...+.+++++...+.- .+.+ +....
T Consensus 230 ~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~~~~~~~~~~-~~~~~ 305 (319)
T 1eg2_A 230 AVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDGLIDKARSYE-IVEGA 305 (319)
T ss_dssp HHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC---------CCEE-EEECG
T ss_pred HHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHccCCcccceee-ecchH
Confidence 455555543 35679999999999988876655 46899999999 9999999998876632 2233 33444
Q ss_pred hhHHHHH
Q 029536 81 LPLLDQL 87 (192)
Q Consensus 81 ~~~~~~~ 87 (192)
.+++..+
T Consensus 306 ~~~~~~~ 312 (319)
T 1eg2_A 306 ANFGAAL 312 (319)
T ss_dssp GGTHHHH
T ss_pred HHHHHHH
Confidence 4555554
No 413
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.87 E-value=0.35 Score=39.13 Aligned_cols=98 Identities=11% Similarity=0.010 Sum_probs=58.2
Q ss_pred HcCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCch--hHHHHHHhhhhc
Q 029536 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL--PLLDQLIQDVSS 93 (192)
Q Consensus 17 ~~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~~~ 93 (192)
..+.++||-+|+| .|..+..+|+... +.+|++++.+++..+.+++ .|.. . ++.-... +.+.++.
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~v~~~~----- 250 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGAD-H--VVDARRDPVKQVMELT----- 250 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTCS-E--EEETTSCHHHHHHHHT-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCCC-E--EEeccchHHHHHHHHh-----
Confidence 3456899999875 5566677787752 4689999999988777654 4532 1 2222211 2222221
Q ss_pred ccccCCCcccEEEEeCCCcCcHH--HHHHHHhccCCCeEEEEeCc
Q 029536 94 TKEKYHGTFDFVFVDADKDNYVN--YHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~~~~~~~--~~~~~~~~L~~gG~lv~~d~ 136 (192)
....+|+||-.... .. .++.+.+. ++|.++.-..
T Consensus 251 ----~g~g~Dvvid~~G~---~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 251 ----RGRGVNVAMDFVGS---QATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp ----TTCCEEEEEESSCC---HHHHHHGGGGEE--EEEEEEECCC
T ss_pred ----CCCCCcEEEECCCC---chHHHHHHHhhc--CCCEEEEEeC
Confidence 12379998643321 22 56666666 8998876443
No 414
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.80 E-value=0.88 Score=34.81 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=50.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~ 94 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++.++...+.+ ..++.++..|..+. ...+.+.+.
T Consensus 6 l~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~-- 77 (255)
T 4eso_A 6 YQGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAG-- 77 (255)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHH--
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHH--
Confidence 467889988865 445555555442 3679999999987776555544 24788888886542 122111100
Q ss_pred cccCCCcccEEEEeCC
Q 029536 95 KEKYHGTFDFVFVDAD 110 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~ 110 (192)
...+++|+++..+.
T Consensus 78 --~~~g~id~lv~nAg 91 (255)
T 4eso_A 78 --QTLGAIDLLHINAG 91 (255)
T ss_dssp --HHHSSEEEEEECCC
T ss_pred --HHhCCCCEEEECCC
Confidence 01357899887653
No 415
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.73 E-value=0.15 Score=40.96 Aligned_cols=58 Identities=7% Similarity=0.043 Sum_probs=44.6
Q ss_pred HHHHHHHhH--cCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC
Q 029536 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV 69 (192)
Q Consensus 9 ~~l~~l~~~--~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 69 (192)
.+++.++.. .+...|||-.||+|..+...... +-+.+++|+++...+.+++++...+.
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 455555543 35679999999999877765543 46899999999999999998876554
No 416
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.65 E-value=1.1 Score=37.61 Aligned_cols=106 Identities=14% Similarity=0.135 Sum_probs=59.4
Q ss_pred HHHhHcCCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHH------------HHHcCCCCceEEEeCCc
Q 029536 13 MLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPI------------IQKAGVAHKIDFREGPA 80 (192)
Q Consensus 13 ~l~~~~~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~------------~~~~~~~~~v~~~~~d~ 80 (192)
.+.+..+..+|--||+ |+++..+|..+..+.+|+++|++++.++..++. +.+ + ..++++ ..|.
T Consensus 29 ~~~r~~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~-~~~l~~-ttd~ 103 (432)
T 3pid_A 29 QMGRGSEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K-PLNFRA-TTDK 103 (432)
T ss_dssp ------CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEE-ESCH
T ss_pred ccccccCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c-cCCeEE-EcCH
Confidence 3444455567888887 555555554443357899999999888766541 111 0 112322 2222
Q ss_pred hhHHHHHHhhhhcccccCCCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEEEeCccCC
Q 029536 81 LPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYDNTLWG 139 (192)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~d~~~~ 139 (192)
.+. -...|+||+..+.. ......+.+.+ |++|.+++..-+...
T Consensus 104 ~ea---------------~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~p 157 (432)
T 3pid_A 104 HDA---------------YRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPV 157 (432)
T ss_dssp HHH---------------HTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCT
T ss_pred HHH---------------HhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCCh
Confidence 221 13469998865421 23456677778 999998887655543
No 417
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=92.62 E-value=0.97 Score=31.70 Aligned_cols=96 Identities=14% Similarity=-0.019 Sum_probs=52.2
Q ss_pred cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEE
Q 029536 28 VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFV 107 (192)
Q Consensus 28 ~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~i 107 (192)
.|.+++.....+......+|..+|-++...+..+..+...+. ..+.....+..+.+..+. ...+|+|++
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~----------~~~~dlvil 77 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD-MKVVGFAKDGLEAVEKAI----------ELKPDVITM 77 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTT-EEEEEEESSHHHHHHHHH----------HHCCSEEEE
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC-eEEEEecCCHHHHHHHhc----------cCCCCEEEE
Confidence 455666666555443346899999999999888888876542 122224566666666654 347999999
Q ss_pred eCCCc--CcHHHHHHHHhccCCCeEEEEeC
Q 029536 108 DADKD--NYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 108 d~~~~--~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
|.... +-.++++.+... .+--+|++..
T Consensus 78 D~~l~~~~g~~l~~~lr~~-~~~~ii~~s~ 106 (164)
T 3t8y_A 78 DIEMPNLNGIEALKLIMKK-APTRVIMVSS 106 (164)
T ss_dssp CSSCSSSCHHHHHHHHHHH-SCCEEEEEES
T ss_pred eCCCCCCCHHHHHHHHHhc-CCceEEEEec
Confidence 97632 335566666543 3444555543
No 418
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.61 E-value=3.9 Score=34.30 Aligned_cols=100 Identities=14% Similarity=0.147 Sum_probs=58.4
Q ss_pred CEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHc---CC---------CCceEEEeCCchhHHHHH
Q 029536 21 KNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKA---GV---------AHKIDFREGPALPLLDQL 87 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~---~~---------~~~v~~~~~d~~~~~~~~ 87 (192)
.+|.-||+ |+++..+|..+. .+.+|+++|.+++.++..++..... ++ ..++++ ..|..+.
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea---- 75 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA---- 75 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH----
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH----
Confidence 46777887 555555554443 2468999999998877655411000 00 112322 1222111
Q ss_pred HhhhhcccccCCCcccEEEEeCCCc----------CcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDADKD----------NYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~~~----------~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
-...|+||+..+.. ...+.++.+.+.|++|.+++...+.+
T Consensus 76 -----------~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 125 (450)
T 3gg2_A 76 -----------VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVP 125 (450)
T ss_dssp -----------GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred -----------HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCC
Confidence 13569999876532 45667788888999988887655443
No 419
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.54 E-value=2.1 Score=33.33 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=49.6
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchh-HHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEH-YEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++. .+...+.++..+ .++.++..|..+. ++...++
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45788888865 445555555442 36789999988753 344444454443 4788999987542 2222222
Q ss_pred hhcccccCCCcccEEEEeC
Q 029536 91 VSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~ 109 (192)
.++.|+++..+
T Consensus 123 --------~g~iD~lvnnA 133 (291)
T 3ijr_A 123 --------LGSLNILVNNV 133 (291)
T ss_dssp --------HSSCCEEEECC
T ss_pred --------cCCCCEEEECC
Confidence 35789988764
No 420
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.37 E-value=0.77 Score=39.23 Aligned_cols=87 Identities=15% Similarity=0.178 Sum_probs=54.2
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
...++|+-+|+| .|......++.+ +.+|+++|.++...+.+++ .|. +. .+.. ..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~----e~--------- 326 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVE----EA--------- 326 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHH----HH---------
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHH----HH---------
Confidence 467899999986 455555555554 4699999999987665543 333 22 2222 22
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
-...|+|+......+... ....+.+++||+++.
T Consensus 327 --l~~aDvVi~atgt~~~i~--~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 327 --IGDADIVVTATGNKDIIM--LEHIKAMKDHAILGN 359 (494)
T ss_dssp --GGGCSEEEECSSSSCSBC--HHHHHHSCTTCEEEE
T ss_pred --HhCCCEEEECCCCHHHHH--HHHHHhcCCCcEEEE
Confidence 235799887654332211 245677899998874
No 421
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.32 E-value=0.9 Score=36.22 Aligned_cols=89 Identities=13% Similarity=0.003 Sum_probs=53.5
Q ss_pred CEEEEEccchhHHHHHHHHhCCC-C-cEEEEEeCCchhHH---HHHHHHHHcCCCCceEEEeC-CchhHHHHHHhhhhcc
Q 029536 21 KNTMEIGVFTGYSLLATALAIPD-D-GKILALDITKEHYE---KGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDVSST 94 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~-~-~~v~~vD~~~~~~~---~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~ 94 (192)
.+|--||+ |.++..++..+.. + .+|+++|.+++..+ ...+.+...+. .. +..+.
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~----------- 84 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAG----------- 84 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGG-----------
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHH-----------
Confidence 57888887 5555555554432 4 58999999973222 22222333332 22 33222
Q ss_pred cccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 95 KEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
-...|+||+-.+.....+.++.+.+.+++|.+++-
T Consensus 85 ----~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 85 ----IACADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp ----GGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ----HhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 23468998877655556667778888888887764
No 422
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.26 E-value=0.68 Score=38.53 Aligned_cols=42 Identities=21% Similarity=0.219 Sum_probs=33.7
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHH
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLP 62 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~ 62 (192)
++.+|+-+|+| .|..+..++..+ +.+|+++|.++...+.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 57899999998 566667777776 4689999999988777665
No 423
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.26 E-value=1.1 Score=34.81 Aligned_cols=81 Identities=12% Similarity=0.184 Sum_probs=56.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh------HHHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP------LLDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~~~ 90 (192)
.+.|.+|-.|.+.|. ++.+++.+. .+++|+.+|.+++.++.+.+.++..+ .++.++..|..+ ..++...+
T Consensus 5 L~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999876554 444444432 36899999999999988888887765 478888888654 22222222
Q ss_pred hhcccccCCCcccEEEEeC
Q 029536 91 VSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~ 109 (192)
.++.|+++-.+
T Consensus 82 --------~G~iDiLVNNA 92 (254)
T 4fn4_A 82 --------YSRIDVLCNNA 92 (254)
T ss_dssp --------HSCCCEEEECC
T ss_pred --------cCCCCEEEECC
Confidence 46899988664
No 424
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=92.21 E-value=1.5 Score=29.06 Aligned_cols=76 Identities=14% Similarity=0.076 Sum_probs=51.4
Q ss_pred EEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHHHh
Q 029536 46 KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRLIE 123 (192)
Q Consensus 46 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~~~ 123 (192)
++..+|-++...+..+..+...+. .+.....+..+.+..+. ...+|+|++|... .+-.++++.+.+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~----------~~~~dlii~d~~l~~~~g~~~~~~l~~ 70 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE----------TLKPDIVIIDVDIPGVNGIQVLETLRK 70 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH----------HHCCSEEEEETTCSSSCHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH----------hcCCCEEEEecCCCCCChHHHHHHHHh
Confidence 688999999999999999988653 33334566666666554 3479999999873 334566777665
Q ss_pred ccCCCe-EEEEe
Q 029536 124 LVKVGG-VIGYD 134 (192)
Q Consensus 124 ~L~~gG-~lv~~ 134 (192)
. .++. ++++.
T Consensus 71 ~-~~~~~ii~~s 81 (134)
T 3f6c_A 71 R-QYSGIIIIVS 81 (134)
T ss_dssp T-TCCSEEEEEE
T ss_pred c-CCCCeEEEEe
Confidence 4 3443 55543
No 425
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.17 E-value=0.61 Score=38.32 Aligned_cols=42 Identities=21% Similarity=0.246 Sum_probs=31.9
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHH
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLP 62 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~ 62 (192)
++++|+-+|+| .|..+..+++.+. .+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 57899999987 4555666677664 579999999987766654
No 426
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.15 E-value=1.3 Score=28.89 Aligned_cols=72 Identities=17% Similarity=0.021 Sum_probs=45.3
Q ss_pred CCEEEEEccchhHHHHHHHHhCC-CC-cEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP-DD-GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTK 95 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~ 95 (192)
.++|+-+|+ |..+..++..+. .+ .+++.+|.+++..+... . ..+.++..|..+. +...
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~-------- 66 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA-------- 66 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH--------
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH--------
Confidence 457899988 666666554432 23 68999999987665443 1 3566677776432 2222
Q ss_pred ccCCCcccEEEEeCCCc
Q 029536 96 EKYHGTFDFVFVDADKD 112 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~ 112 (192)
-..+|+|+...+..
T Consensus 67 ---~~~~d~vi~~~~~~ 80 (118)
T 3ic5_A 67 ---LGGFDAVISAAPFF 80 (118)
T ss_dssp ---TTTCSEEEECSCGG
T ss_pred ---HcCCCEEEECCCch
Confidence 34789998876543
No 427
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.14 E-value=0.94 Score=36.00 Aligned_cols=84 Identities=12% Similarity=0.137 Sum_probs=57.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhC-CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAI-PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+++|-.|++ |+.+..+++.+ ..+.+|+.++.+++..+.+.+.+...+...++.++..|..+. +......
T Consensus 6 l~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 356789988875 44555555544 236799999999998888777777665545789999986542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.+++|+++..+.
T Consensus 85 --------~g~id~lv~nAg 96 (319)
T 3ioy_A 85 --------FGPVSILCNNAG 96 (319)
T ss_dssp --------TCCEEEEEECCC
T ss_pred --------CCCCCEEEECCC
Confidence 357899987754
No 428
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.05 E-value=0.38 Score=39.82 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=36.4
Q ss_pred CEEEEEccchhHHHHHHHHhCC------CCcEEEEEeCCchhHHHHHHHHHH
Q 029536 21 KNTMEIGVFTGYSLLATALAIP------DDGKILALDITKEHYEKGLPIIQK 66 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~------~~~~v~~vD~~~~~~~~a~~~~~~ 66 (192)
-.|+|+|.|.|..+..+++.+. ...+++.||+||...+.-++.+..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 4799999999999998876642 134899999999888766666644
No 429
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.99 E-value=0.53 Score=36.52 Aligned_cols=89 Identities=18% Similarity=0.245 Sum_probs=53.1
Q ss_pred CEEEEEccchhHHHHHHHHhCCC-Cc--EEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 21 KNTMEIGVFTGYSLLATALAIPD-DG--KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~-~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
++|.-||+| .++..++..+.. +. +|+++|.+++..+.++ +.|... . ...+..+.
T Consensus 2 ~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~-------------- 58 (281)
T 2g5c_A 2 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKV-------------- 58 (281)
T ss_dssp CEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG--------------
T ss_pred cEEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHH--------------
Confidence 367788874 444444443321 23 7999999988776544 334321 1 12222221
Q ss_pred CCC-cccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 98 YHG-TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 98 ~~~-~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
-. ..|+|++-.+.....+.++.+.+.++++.+|+.
T Consensus 59 -~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 59 -EDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp -GGTCCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -hcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 23 579999877655566777777788888886653
No 430
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.89 E-value=0.37 Score=36.86 Aligned_cols=87 Identities=15% Similarity=0.172 Sum_probs=51.7
Q ss_pred CEEEEEccchhHHHHHHHHhCCC-C----cEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 21 KNTMEIGVFTGYSLLATALAIPD-D----GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 21 ~~ileiG~g~G~~~~~la~~~~~-~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
++|.-||+| ..+..++..+.. + .+|+.+|.+++..+...+.+ +. .. ..+..+..
T Consensus 3 ~~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g~----~~-~~~~~e~~----------- 61 (247)
T 3gt0_A 3 KQIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---GL----TT-TTDNNEVA----------- 61 (247)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---CC----EE-CSCHHHHH-----------
T ss_pred CeEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---CC----EE-eCChHHHH-----------
Confidence 357778875 444444443321 2 27999999988776554422 32 21 22322222
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
...|+||+-.......+.++.+.+.+++|.+++
T Consensus 62 ----~~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 62 ----KNADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp ----HHCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred ----HhCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 246999998776677788888888888888776
No 431
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=91.81 E-value=2.2 Score=29.41 Aligned_cols=81 Identities=14% Similarity=0.050 Sum_probs=53.7
Q ss_pred cEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHHH
Q 029536 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRLI 122 (192)
Q Consensus 45 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~~ 122 (192)
.+|..+|-++...+..++.+...++ .+.....+..+.+..+... ...+|+|++|... .+-.++++.+.
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~--------~~~~dliilD~~l~~~~g~~~~~~lr 106 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNH--------YPNIDIVTLXITMPKMDGITCLSNIM 106 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH--------GGGCCEEEECSSCSSSCHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc--------CCCCCEEEEeccCCCccHHHHHHHHH
Confidence 3799999999999999999988764 3433566777766666422 2279999999763 23456666665
Q ss_pred hccCCCeEEEEeC
Q 029536 123 ELVKVGGVIGYDN 135 (192)
Q Consensus 123 ~~L~~gG~lv~~d 135 (192)
+.-..--+|++.+
T Consensus 107 ~~~~~~~ii~ls~ 119 (157)
T 3hzh_A 107 EFDKNARVIMISA 119 (157)
T ss_dssp HHCTTCCEEEEES
T ss_pred hhCCCCcEEEEec
Confidence 5432233555543
No 432
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.67 E-value=0.7 Score=37.69 Aligned_cols=92 Identities=9% Similarity=0.035 Sum_probs=56.9
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+..+|.-||+ |..+..++..+. .+..|+++|.+++..+.+.+ .+. . ...+..+....
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~----------- 78 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAK----------- 78 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHH-----------
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhc-----------
Confidence 4568888887 555555554432 24689999999887654443 232 1 12233333221
Q ss_pred CCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 98 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 98 ~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
....|+||+-.+.....+.++.+.+.|++|.+|+-
T Consensus 79 -a~~~DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 79 -LVKPRVVWLMVPAAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp -SCSSCEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred -CCCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEe
Confidence 23569998876655667778888888888877763
No 433
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.64 E-value=1.3 Score=34.15 Aligned_cols=88 Identities=16% Similarity=0.073 Sum_probs=55.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~ 94 (192)
.+.+++|-+|+ +|..+..+++.+. .+.+|+.++.++...+...+.+...+...++.++.+|..+. +..+.+++..
T Consensus 30 l~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~- 107 (279)
T 1xg5_A 30 WRDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS- 107 (279)
T ss_dssp GTTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH-
Confidence 35678888875 4555666655442 35789999999887777666676666556788888886542 2222111000
Q ss_pred cccCCCcccEEEEeCC
Q 029536 95 KEKYHGTFDFVFVDAD 110 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~ 110 (192)
..+++|+++..+.
T Consensus 108 ---~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 108 ---QHSGVDICINNAG 120 (279)
T ss_dssp ---HHCCCSEEEECCC
T ss_pred ---hCCCCCEEEECCC
Confidence 0347899887653
No 434
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.62 E-value=0.58 Score=38.80 Aligned_cols=41 Identities=22% Similarity=0.222 Sum_probs=31.6
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHH
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGL 61 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 61 (192)
++.+|+-+|+| .|..+..++..+. .+|+++|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 57899999987 5556666777664 68999999998776654
No 435
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.61 E-value=0.29 Score=38.78 Aligned_cols=87 Identities=14% Similarity=0.070 Sum_probs=56.0
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.+.++||-+|+| .|..+..+|+.. +.+|++++ +++..+.+++ .|. -.++ .| .+.+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa---~~v~-~d----~~~v--------- 196 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGV---RHLY-RE----PSQV--------- 196 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTE---EEEE-SS----GGGC---------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCC---CEEE-cC----HHHh---------
Confidence 356799999986 577888888876 46999999 8888887765 343 1122 23 1111
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEe
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 134 (192)
...+|+|| |+.-. ..+..+++.|+++|.++.-
T Consensus 197 --~~g~Dvv~-d~~g~---~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 --TQKYFAIF-DAVNS---QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp --CSCEEEEE-CC----------TTGGGEEEEEEEEEE
T ss_pred --CCCccEEE-ECCCc---hhHHHHHHHhcCCCEEEEE
Confidence 46799876 33211 1235678899999988764
No 436
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.37 E-value=1.6 Score=36.06 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=55.4
Q ss_pred EEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCC--------------CCceEEEeCCchhHHHHH
Q 029536 22 NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV--------------AHKIDFREGPALPLLDQL 87 (192)
Q Consensus 22 ~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~~v~~~~~d~~~~~~~~ 87 (192)
+|.-||+ |+.+..++..+..+.+|+++|.+++.++..++ .+. ..++.+ ..+..+.+
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~----~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~--- 71 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINN----GLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAY--- 71 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHT----TCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH---
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHc----CCCCcCCCCHHHHHHhccCcEEE-eCCHHHHh---
Confidence 4667777 67777766655445689999999887665432 111 012222 12221111
Q ss_pred HhhhhcccccCCCcccEEEEeCCCc-----------CcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
...|+||+..+.. ...+.++.+.+ +++|.+++..-+.
T Consensus 72 ------------~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~ 119 (402)
T 1dlj_A 72 ------------KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTI 119 (402)
T ss_dssp ------------HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCC
T ss_pred ------------cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCC
Confidence 2469998875533 25667777778 8998888763333
No 437
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.31 E-value=0.79 Score=31.16 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=51.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEK 97 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 97 (192)
+.++|+-+|+ |..+..++..+. .+.+++.+|.+++..+.+++ ....++.+|..+. +.+...
T Consensus 5 ~~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~--------~~~~~~~~d~~~~-~~l~~~------- 66 (144)
T 2hmt_A 5 KNKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--------YATHAVIANATEE-NELLSL------- 66 (144)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT--------TCSEEEECCTTCH-HHHHTT-------
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hCCEEEEeCCCCH-HHHHhc-------
Confidence 3467999987 666666655542 24679999998765443221 1235566765432 122100
Q ss_pred CCCcccEEEEeCCCc-CcHHHHHHHHhccCCCeEEE
Q 029536 98 YHGTFDFVFVDADKD-NYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 98 ~~~~~D~v~id~~~~-~~~~~~~~~~~~L~~gG~lv 132 (192)
....+|+|++..... ..........+.+.+.-+++
T Consensus 67 ~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 102 (144)
T 2hmt_A 67 GIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWV 102 (144)
T ss_dssp TGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEECCCCchHHHHHHHHHHHHcCCCeEEE
Confidence 034689998866532 22223334445566763333
No 438
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.28 E-value=2 Score=32.92 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=54.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+.+|-.|++.| .+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. ++...+.
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788999887544 4444444432 36789999999988887777776654 4788898886542 2222222
Q ss_pred hhcccccCCCcccEEEEeC
Q 029536 91 VSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~ 109 (192)
.++.|+++..+
T Consensus 86 --------~g~id~lv~nA 96 (264)
T 3ucx_A 86 --------YGRVDVVINNA 96 (264)
T ss_dssp --------TSCCSEEEECC
T ss_pred --------cCCCcEEEECC
Confidence 46899998765
No 439
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.22 E-value=1.6 Score=33.87 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=56.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh------HHHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP------LLDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~~~ 90 (192)
.+.|.+|-.|.+.| .++.+++.+. .+++|+.+|.+++.++.+.+.+.+.+ .++..+..|..+ ..++...+
T Consensus 7 L~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46788888887654 4445554442 36899999999998888877777765 368888888643 22333322
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 84 --------~G~iDiLVNNAG 95 (255)
T 4g81_D 84 --------GIHVDILINNAG 95 (255)
T ss_dssp --------TCCCCEEEECCC
T ss_pred --------CCCCcEEEECCC
Confidence 578999887653
No 440
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=91.08 E-value=3.1 Score=31.72 Aligned_cols=87 Identities=18% Similarity=0.111 Sum_probs=50.5
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~ 95 (192)
+.+++|-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.+.......++.++..|..+. +..+.+.+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--- 81 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV--- 81 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH---
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH---
Confidence 5678888886 4555555555442 36789999998876655544443321124688888886542 222211100
Q ss_pred ccCCCcccEEEEeCC
Q 029536 96 EKYHGTFDFVFVDAD 110 (192)
Q Consensus 96 ~~~~~~~D~v~id~~ 110 (192)
...+++|.++..+.
T Consensus 82 -~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 82 -DHFGRLDILVNNAG 95 (267)
T ss_dssp -HHHSCCCEEEECCC
T ss_pred -HHcCCCCEEEECCC
Confidence 00357899887754
No 441
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=91.06 E-value=2.3 Score=32.50 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=50.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEE-eCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILAL-DITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~v-D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 89 (192)
.+.+++|-.|++.| .+..+++.+. .+.+|+.+ +.+++..+.+.+.++..+ .++.++..|..+. .+...+
T Consensus 6 l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45788998887544 4455554432 35788887 777777666666666544 4688888886542 222222
Q ss_pred hhhcccccCCCcccEEEEeC
Q 029536 90 DVSSTKEKYHGTFDFVFVDA 109 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~ 109 (192)
. .++.|.++..+
T Consensus 83 ~--------~g~id~lv~nA 94 (259)
T 3edm_A 83 K--------FGEIHGLVHVA 94 (259)
T ss_dssp H--------HCSEEEEEECC
T ss_pred H--------hCCCCEEEECC
Confidence 2 35789988765
No 442
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.99 E-value=0.12 Score=41.31 Aligned_cols=94 Identities=10% Similarity=0.047 Sum_probs=58.5
Q ss_pred EEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCC
Q 029536 22 NTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYH 99 (192)
Q Consensus 22 ~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 99 (192)
+||-+|+ +.|..+..+|+.. +.++++++.+++..+.+++ .|.. . ++. ..+....... ....
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~-~--v~~--~~~~~~~~~~------~~~~ 215 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGAS-E--VIS--REDVYDGTLK------ALSK 215 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCS-E--EEE--HHHHCSSCCC------SSCC
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc-E--EEE--CCCchHHHHH------Hhhc
Confidence 7999996 5788888888875 4679999999888877764 3432 1 121 1110000000 0013
Q ss_pred CcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeCc
Q 029536 100 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 100 ~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
..+|+||-.... +.++.+++.++++|.++.-..
T Consensus 216 ~~~d~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 216 QQWQGAVDPVGG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CCEEEEEESCCT----HHHHHHHTTEEEEEEEEECCC
T ss_pred CCccEEEECCcH----HHHHHHHHhhcCCCEEEEEec
Confidence 468987643322 357888899999999887543
No 443
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.81 E-value=1.8 Score=32.62 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=54.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQDV 91 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~~ 91 (192)
+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++..|..+. ++.....
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~- 79 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAE- 79 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHT-
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH-
Confidence 46788888764 455555554442 36799999999988887777777654 4788888886542 2222222
Q ss_pred hcccccCCCcccEEEEeCC
Q 029536 92 SSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~ 110 (192)
.+++|.++..+.
T Consensus 80 -------~~~id~li~~Ag 91 (247)
T 3lyl_A 80 -------NLAIDILVNNAG 91 (247)
T ss_dssp -------TCCCSEEEECCC
T ss_pred -------cCCCCEEEECCC
Confidence 457899987654
No 444
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=90.77 E-value=2.6 Score=32.86 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=49.7
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCc--hhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITK--EHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 89 (192)
+.+++|-.|++ |..+..+++.+. .+.+|+.++.+. +..+...+.++..+ .++.++..|..+. .+....
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45788888864 455555555442 357899988863 34445555555544 4788888886542 222222
Q ss_pred hhhcccccCCCcccEEEEeCC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~ 110 (192)
. .++.|+++..+.
T Consensus 125 ~--------~g~iD~lv~nAg 137 (294)
T 3r3s_A 125 A--------LGGLDILALVAG 137 (294)
T ss_dssp H--------HTCCCEEEECCC
T ss_pred H--------cCCCCEEEECCC
Confidence 2 357899887654
No 445
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=90.75 E-value=2.4 Score=28.97 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=53.0
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...+. .+. ...+..+.+..+. ...+|+|++|... .+-.++++.+
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dlvi~D~~l~~~~g~~~~~~l 80 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPLPY--TLH-FARDATQALQLLA----------SREVDLVISAAHLPQMDGPTLLARI 80 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTSSC--EEE-EESSHHHHHHHHH----------HSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHhcccCc--EEE-EECCHHHHHHHHH----------cCCCCEEEEeCCCCcCcHHHHHHHH
Confidence 36899999999999988888887654 333 4556666666654 4579999999873 2345667766
Q ss_pred HhccCCCeEEEEeC
Q 029536 122 IELVKVGGVIGYDN 135 (192)
Q Consensus 122 ~~~L~~gG~lv~~d 135 (192)
.+.-..--+|++..
T Consensus 81 ~~~~~~~~ii~~s~ 94 (153)
T 3hv2_A 81 HQQYPSTTRILLTG 94 (153)
T ss_dssp HHHCTTSEEEEECC
T ss_pred HhHCCCCeEEEEEC
Confidence 65333333555543
No 446
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.72 E-value=1.3 Score=33.77 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=52.3
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHhC-CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHh
Q 029536 18 INAKNTMEIGV-FTGYSLLATALAI-PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~-g~G~~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 89 (192)
.+.+++|-+|+ |.|. +..+++.+ ..+.+|+.++.+++..+...+.+...+ ..++.++..|..+. ++....
T Consensus 20 l~~k~vlITGasg~GI-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGI-GSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCch-HHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 35678998886 3322 22333222 126789999999988877777775543 25799999987542 222222
Q ss_pred hhhcccccCCCcccEEEEeCC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~ 110 (192)
+ .+++|+++..+.
T Consensus 98 ~--------~g~id~li~~Ag 110 (266)
T 3o38_A 98 K--------AGRLDVLVNNAG 110 (266)
T ss_dssp H--------HSCCCEEEECCC
T ss_pred H--------hCCCcEEEECCC
Confidence 2 357899987654
No 447
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=90.68 E-value=2.6 Score=28.70 Aligned_cols=80 Identities=9% Similarity=-0.010 Sum_probs=53.7
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...+. ..+.....+..+.+..+. ...+|+|++|... .+-.++++.+
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~a~~~l~----------~~~~dlii~d~~l~~~~g~~~~~~l 83 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGS-VNVVGEADDGAAALELIK----------AHLPDVALLDYRMPGMDGAQVAAAV 83 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSS-EEEEEEESSHHHHHHHHH----------HHCCSEEEEETTCSSSCHHHHHHHH
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCC-eEEEEEeCCHHHHHHHHH----------hcCCCEEEEeCCCCCCCHHHHHHHH
Confidence 57899999999999999998888753 122234566666666654 3479999999763 3345667766
Q ss_pred HhccCCCe-EEEEeC
Q 029536 122 IELVKVGG-VIGYDN 135 (192)
Q Consensus 122 ~~~L~~gG-~lv~~d 135 (192)
.+. .+.- +|++.+
T Consensus 84 ~~~-~~~~~ii~~s~ 97 (152)
T 3eul_A 84 RSY-ELPTRVLLISA 97 (152)
T ss_dssp HHT-TCSCEEEEEES
T ss_pred Hhc-CCCCeEEEEEc
Confidence 654 3443 555543
No 448
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=90.64 E-value=2.5 Score=27.84 Aligned_cols=78 Identities=13% Similarity=-0.006 Sum_probs=52.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~ 121 (192)
..++..+|-++...+..++.+...|. .+. ...+..+.+..+. ..++|+|++|... .+-.++++.+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dlvi~d~~l~~~~g~~~~~~l 73 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGA--TTV-LAADGVDALELLG----------GFTPDLMICDIAMPRMNGLKLLEHI 73 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHT----------TCCCSEEEECCC-----CHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHh----------cCCCCEEEEecCCCCCCHHHHHHHH
Confidence 46899999999999999998988765 333 3566666666653 5679999999762 2345667766
Q ss_pred HhccCCCeEEEEe
Q 029536 122 IELVKVGGVIGYD 134 (192)
Q Consensus 122 ~~~L~~gG~lv~~ 134 (192)
.+.-..--++++.
T Consensus 74 ~~~~~~~~ii~~t 86 (130)
T 3eod_A 74 RNRGDQTPVLVIS 86 (130)
T ss_dssp HHTTCCCCEEEEE
T ss_pred HhcCCCCCEEEEE
Confidence 6543323355554
No 449
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.62 E-value=2.1 Score=33.88 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=41.2
Q ss_pred cCCCEEEEEccc-hhHHHH-HHHHhCCCCcEEEEEeCCc------------------hhHHHHHHHHHHcCCCCceEEEe
Q 029536 18 INAKNTMEIGVF-TGYSLL-ATALAIPDDGKILALDITK------------------EHYEKGLPIIQKAGVAHKIDFRE 77 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~-~la~~~~~~~~v~~vD~~~------------------~~~~~a~~~~~~~~~~~~v~~~~ 77 (192)
.+..+|+-+||| .|...+ .|+.. . -++++.+|.+. ...+.+++.+.+.+..-+++.+.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 355799999997 444333 34443 2 58999999876 56777788888776555666666
Q ss_pred CCc
Q 029536 78 GPA 80 (192)
Q Consensus 78 ~d~ 80 (192)
.+.
T Consensus 112 ~~l 114 (292)
T 3h8v_A 112 YNI 114 (292)
T ss_dssp CCT
T ss_pred ccC
Confidence 554
No 450
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.60 E-value=0.47 Score=39.97 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=26.9
Q ss_pred CCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHH
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGL 61 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~ 61 (192)
..+|--||+ |+.++.+|..+. .+.+|+++|++++.++..+
T Consensus 21 m~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 21 MASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CCEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 357888887 555554443332 2568999999998876554
No 451
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=90.58 E-value=2.5 Score=27.71 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=52.0
Q ss_pred cEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHHH
Q 029536 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRLI 122 (192)
Q Consensus 45 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~~ 122 (192)
.+|..+|-++...+..++.+...|. .+. ...+..+.+..+. ...+|+|++|... .+-.++++.+.
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dlii~D~~l~~~~g~~~~~~l~ 70 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEMLGF--QAD-YVMSGTDALHAMS----------TRGYDAVFIDLNLPDTSGLALVKQLR 70 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTE--EEE-EESSHHHHHHHHH----------HSCCSEEEEESBCSSSBHHHHHHHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHHcCC--CEE-EECCHHHHHHHHH----------hcCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 5789999999999999999988765 333 3456666666554 4579999999763 33456777776
Q ss_pred hc--cCCCeEEEEe
Q 029536 123 EL--VKVGGVIGYD 134 (192)
Q Consensus 123 ~~--L~~gG~lv~~ 134 (192)
+. ...--++++.
T Consensus 71 ~~~~~~~~~ii~~s 84 (127)
T 3i42_A 71 ALPMEKTSKFVAVS 84 (127)
T ss_dssp HSCCSSCCEEEEEE
T ss_pred hhhccCCCCEEEEE
Confidence 54 2223355554
No 452
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=90.46 E-value=2.8 Score=28.18 Aligned_cols=81 Identities=7% Similarity=0.066 Sum_probs=53.7
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc--CcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD--NYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~--~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...+... .-....+..+.+..+. ...+|+|++|.... +-.++++.+
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~----------~~~~dlii~D~~l~~~~g~~~~~~l 73 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHC-QLEFVDNGAKALYQVQ----------QAKYDLIILDIGLPIANGFEVMSAV 73 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCE-EEEEESSHHHHHHHHT----------TCCCSEEEECTTCGGGCHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCe-eEEEECCHHHHHHHhh----------cCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 4579999999999999999998877631 2234556666666553 56899999998732 345666666
Q ss_pred Hhc-cCCC-eEEEEeC
Q 029536 122 IEL-VKVG-GVIGYDN 135 (192)
Q Consensus 122 ~~~-L~~g-G~lv~~d 135 (192)
.+. ..++ -+|++..
T Consensus 74 r~~~~~~~~pii~~s~ 89 (144)
T 3kht_A 74 RKPGANQHTPIVILTD 89 (144)
T ss_dssp HSSSTTTTCCEEEEET
T ss_pred HhcccccCCCEEEEeC
Confidence 552 2233 3565543
No 453
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.44 E-value=1.7 Score=36.59 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=51.0
Q ss_pred CCEEEEEccchhHHHHHHHHhCCC-CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhcccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKE 96 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 96 (192)
..+|+-+|+ |..+..+|+.+.. +..|+.+|.+++.++.+.+.+ .+..++||+.+ .+.+..
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Ag-------- 65 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAG-------- 65 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHT--------
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcC--------
Confidence 457888666 7777888888753 467999999999887666533 46788999754 444432
Q ss_pred cCCCcccEEEEeCC
Q 029536 97 KYHGTFDFVFVDAD 110 (192)
Q Consensus 97 ~~~~~~D~v~id~~ 110 (192)
-...|++++-.+
T Consensus 66 --i~~ad~~ia~t~ 77 (461)
T 4g65_A 66 --AQDADMLVAVTN 77 (461)
T ss_dssp --TTTCSEEEECCS
T ss_pred --CCcCCEEEEEcC
Confidence 467898877544
No 454
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.36 E-value=0.93 Score=35.92 Aligned_cols=94 Identities=13% Similarity=-0.014 Sum_probs=58.1
Q ss_pred hHcCCCEEEEEc--cchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh-HHHHHHhhhh
Q 029536 16 KLINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP-LLDQLIQDVS 92 (192)
Q Consensus 16 ~~~~~~~ileiG--~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~ 92 (192)
...+.++||-+| .+.|..+..+|+.. +.++++++ +++..+.+ ++.|... ++.....+ +.+.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~----~~lGa~~---~i~~~~~~~~~~~------ 212 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFL----KALGAEQ---CINYHEEDFLLAI------ 212 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHH----HHHTCSE---EEETTTSCHHHHC------
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHH----HHcCCCE---EEeCCCcchhhhh------
Confidence 344568999986 44788888899886 46888887 44434444 4455531 23222222 2221
Q ss_pred cccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 93 STKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 93 ~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
-..+|+||-... ...++.+++.|+++|.++.-.
T Consensus 213 ------~~g~D~v~d~~g----~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 213 ------STPVDAVIDLVG----GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ------CSCEEEEEESSC----HHHHHHHGGGEEEEEEEEECC
T ss_pred ------ccCCCEEEECCC----cHHHHHHHHhccCCCEEEEeC
Confidence 357898764332 223478889999999988753
No 455
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=90.34 E-value=2.7 Score=28.00 Aligned_cols=79 Identities=11% Similarity=-0.141 Sum_probs=54.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc---CcHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD---NYVNYHKR 120 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~---~~~~~~~~ 120 (192)
..+|..+|-++...+..+..+...++ .+.....+..+.+..+. ...+|+|++|.... .-.++++.
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~----------~~~~dlii~d~~~~~~~~g~~~~~~ 76 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGY--DVLGVFDNGEEAVRCAP----------DLRPDIALVDIMLCGALDGVETAAR 76 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH----------HHCCSEEEEESSCCSSSCHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCC--eeEEEECCHHHHHHHHH----------hCCCCEEEEecCCCCCCCHHHHHHH
Confidence 46899999999999999998888665 34334566666666654 34699999997632 34566777
Q ss_pred HHhccCCCeEEEEeC
Q 029536 121 LIELVKVGGVIGYDN 135 (192)
Q Consensus 121 ~~~~L~~gG~lv~~d 135 (192)
+... ..--+|++.+
T Consensus 77 l~~~-~~~~ii~ls~ 90 (140)
T 3cg0_A 77 LAAG-CNLPIIFITS 90 (140)
T ss_dssp HHHH-SCCCEEEEEC
T ss_pred HHhC-CCCCEEEEec
Confidence 7665 3334565543
No 456
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=90.27 E-value=2.3 Score=28.73 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=52.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc--CcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD--NYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~--~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...++ .+. ...+..+.+..+. ...+|+|++|.... .-.++++.+
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dlii~d~~l~~~~g~~~~~~l 74 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQEGF--DII-QCGNAIEAVPVAV----------KTHPHLIITEANMPKISGMDLFNSL 74 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTE--EEE-EESSHHHHHHHHH----------HHCCSEEEEESCCSSSCHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHH----------cCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 46899999999999988888887664 343 4456666665554 34799999997632 345666666
Q ss_pred Hh--ccCCCeEEEEeC
Q 029536 122 IE--LVKVGGVIGYDN 135 (192)
Q Consensus 122 ~~--~L~~gG~lv~~d 135 (192)
.+ ....--+|++.+
T Consensus 75 ~~~~~~~~~pii~ls~ 90 (147)
T 2zay_A 75 KKNPQTASIPVIALSG 90 (147)
T ss_dssp HTSTTTTTSCEEEEES
T ss_pred HcCcccCCCCEEEEeC
Confidence 65 223334666544
No 457
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.17 E-value=2.1 Score=32.73 Aligned_cols=84 Identities=11% Similarity=0.022 Sum_probs=53.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+.+|-.|++.| .+..+++.+. .+.+|+.++.+++..+.+.+.+....-..++.++..|..+. .......
T Consensus 6 l~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 35678888887544 4455554432 36789999999988877777666532224588888886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 85 --------~g~id~lvnnAg 96 (265)
T 3lf2_A 85 --------LGCASILVNNAG 96 (265)
T ss_dssp --------HCSCSEEEECCC
T ss_pred --------cCCCCEEEECCC
Confidence 357899887653
No 458
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.16 E-value=1.3 Score=34.35 Aligned_cols=87 Identities=7% Similarity=0.046 Sum_probs=54.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH---HHHHHhhhhc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL---LDQLIQDVSS 93 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~~~ 93 (192)
.+.+++|-.|++ |+.+..+++.+. .+.+|+.++.+++..+.+.+.+...+- .++.++..|..+. ...+.+.+..
T Consensus 10 ~~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 356788888865 445555555442 367999999999887777777765543 5789999887543 2222211000
Q ss_pred ccccCCCcccEEEEeCC
Q 029536 94 TKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 94 ~~~~~~~~~D~v~id~~ 110 (192)
..+++|+++..+.
T Consensus 88 ----~~g~iD~lv~nAg 100 (311)
T 3o26_A 88 ----HFGKLDILVNNAG 100 (311)
T ss_dssp ----HHSSCCEEEECCC
T ss_pred ----hCCCCCEEEECCc
Confidence 0357999988765
No 459
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.13 E-value=2.1 Score=32.28 Aligned_cols=86 Identities=17% Similarity=0.086 Sum_probs=54.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~ 94 (192)
.+.+++|-.|+. |..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. ...+..++..
T Consensus 7 ~~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~- 82 (253)
T 3qiv_A 7 FENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLA- 82 (253)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH-
Confidence 356788988864 455555555542 36789999999988877777676543 4788888887542 2222111000
Q ss_pred cccCCCcccEEEEeCC
Q 029536 95 KEKYHGTFDFVFVDAD 110 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~ 110 (192)
..+++|.++..+.
T Consensus 83 ---~~g~id~li~~Ag 95 (253)
T 3qiv_A 83 ---EFGGIDYLVNNAA 95 (253)
T ss_dssp ---HHSCCCEEEECCC
T ss_pred ---HcCCCCEEEECCC
Confidence 0357899987653
No 460
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.09 E-value=1.8 Score=33.57 Aligned_cols=82 Identities=13% Similarity=0.138 Sum_probs=52.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+++.+|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. ++...+.
T Consensus 22 ~~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456788988865 444555554442 36789999999988877777776544 4788898886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 99 --------~g~id~lv~nAg 110 (279)
T 3sju_A 99 --------FGPIGILVNSAG 110 (279)
T ss_dssp --------HCSCCEEEECCC
T ss_pred --------cCCCcEEEECCC
Confidence 357899887653
No 461
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.08 E-value=3.9 Score=31.96 Aligned_cols=88 Identities=11% Similarity=0.022 Sum_probs=51.1
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++++++-||+| .|......+..+ +.+|+++|.+++..+.+. ..+. +.... +.++++
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~----~~g~----~~~~~---~~l~~~--------- 210 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIA----EMGM----EPFHI---SKAAQE--------- 210 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTS----EEEEG---GGHHHH---------
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHH----HCCC----eecCh---hhHHHH---------
Confidence 467899999975 333333344443 468999999986544332 2332 22211 123333
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
-...|+|+...+.....+ .....+++|++++
T Consensus 211 --l~~aDvVi~~~p~~~i~~---~~l~~mk~~~~li 241 (293)
T 3d4o_A 211 --LRDVDVCINTIPALVVTA---NVLAEMPSHTFVI 241 (293)
T ss_dssp --TTTCSEEEECCSSCCBCH---HHHHHSCTTCEEE
T ss_pred --hcCCCEEEECCChHHhCH---HHHHhcCCCCEEE
Confidence 346899988765322211 3456789999876
No 462
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.07 E-value=2.1 Score=33.55 Aligned_cols=86 Identities=17% Similarity=0.192 Sum_probs=55.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~ 94 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++.++.+.+.+...+ .++.++..|..+. ...+.+++..
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~- 104 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFR- 104 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHH-
Confidence 456789988875 445555555442 36789999999988887777776654 4788888886542 2222111000
Q ss_pred cccCCCcccEEEEeCC
Q 029536 95 KEKYHGTFDFVFVDAD 110 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~ 110 (192)
..+++|+++..+.
T Consensus 105 ---~~g~id~lvnnAg 117 (301)
T 3tjr_A 105 ---LLGGVDVVFSNAG 117 (301)
T ss_dssp ---HHSSCSEEEECCC
T ss_pred ---hCCCCCEEEECCC
Confidence 0357899987654
No 463
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=90.02 E-value=3 Score=27.82 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=52.9
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...+. .+ ....+..+.+..+. ...+|+|++|... .+-.++++.+
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~--~v-~~~~~~~~a~~~l~----------~~~~dlvi~d~~l~~~~g~~~~~~l 72 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGF--DS-DMVHSAAQALEQVA----------RRPYAAMTVDLNLPDQDGVSLIRAL 72 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHH----------HSCCSEEEECSCCSSSCHHHHHHHH
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCC--eE-EEECCHHHHHHHHH----------hCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 46899999999999999999988765 23 34456666666654 4579999999763 3345666666
Q ss_pred Hhc-cCCC-eEEEEe
Q 029536 122 IEL-VKVG-GVIGYD 134 (192)
Q Consensus 122 ~~~-L~~g-G~lv~~ 134 (192)
.+. ..++ -+|++.
T Consensus 73 ~~~~~~~~~~ii~~s 87 (140)
T 3grc_A 73 RRDSRTRDLAIVVVS 87 (140)
T ss_dssp HTSGGGTTCEEEEEC
T ss_pred HhCcccCCCCEEEEe
Confidence 652 2233 355553
No 464
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.00 E-value=2.2 Score=36.13 Aligned_cols=102 Identities=15% Similarity=0.073 Sum_probs=57.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHc---CC---------CCceEEEeCCchhHH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKA---GV---------AHKIDFREGPALPLL 84 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~---~~---------~~~v~~~~~d~~~~~ 84 (192)
....+|.-||+| +.+..+|..+. .+.+|+++|.+++.++..++..... ++ ..++++ ..|..+.+
T Consensus 6 ~~~~~I~VIG~G--~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 6 HGSMNLTIIGSG--SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp -CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCCceEEEECcC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 345688889885 33333333332 1468999999998877655421000 00 012222 22221111
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCC----------cCcHHHHHHHHhccCCCeEEEEeCcc
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADK----------DNYVNYHKRLIELVKVGGVIGYDNTL 137 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~----------~~~~~~~~~~~~~L~~gG~lv~~d~~ 137 (192)
...|+||+.-+. ....+.++.+.+.+++|.+++...+.
T Consensus 83 ---------------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv 130 (478)
T 2y0c_A 83 ---------------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV 130 (478)
T ss_dssp ---------------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred ---------------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 246999987542 34566777788899998888755443
No 465
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=90.00 E-value=1.8 Score=35.08 Aligned_cols=69 Identities=19% Similarity=0.113 Sum_probs=45.3
Q ss_pred CCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhccccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTKEK 97 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~~ 97 (192)
..+|+-+|| |..+..+++.+.....++.+|.+.+.++.+++ .+..+..|..+ .+..+
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~---------- 74 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEV---------- 74 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHH----------
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHH----------
Confidence 457999998 77777777777667889999999877665542 34455556543 23333
Q ss_pred CCCcccEEEEeCC
Q 029536 98 YHGTFDFVFVDAD 110 (192)
Q Consensus 98 ~~~~~D~v~id~~ 110 (192)
-...|+|+.-.+
T Consensus 75 -~~~~DvVi~~~p 86 (365)
T 3abi_A 75 -MKEFELVIGALP 86 (365)
T ss_dssp -HTTCSEEEECCC
T ss_pred -HhCCCEEEEecC
Confidence 245788876544
No 466
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=89.95 E-value=2 Score=32.90 Aligned_cols=83 Identities=11% Similarity=0.029 Sum_probs=55.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HHHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 95 (192)
+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+....+.++..|..+ ....+.++
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 82 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK----- 82 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-----
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-----
Confidence 56788888764 445555555442 3679999999998887777667665544578888888654 23333333
Q ss_pred ccCCCcccEEEEeCC
Q 029536 96 EKYHGTFDFVFVDAD 110 (192)
Q Consensus 96 ~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 83 ---~g~id~lv~nAg 94 (267)
T 3t4x_A 83 ---YPKVDILINNLG 94 (267)
T ss_dssp ---CCCCSEEEECCC
T ss_pred ---cCCCCEEEECCC
Confidence 468999887653
No 467
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=89.95 E-value=2.1 Score=33.00 Aligned_cols=84 Identities=11% Similarity=0.082 Sum_probs=54.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCC-CceEEEeCCchhH------HHHHHh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------~~~~~~ 89 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+.+.+.++..+.. .++.++..|..+. ++....
T Consensus 9 l~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 456788888864 445555554442 3678999999998887777777665432 3788899886542 222222
Q ss_pred hhhcccccCCCcccEEEEeCC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~ 110 (192)
. .++.|+++..+.
T Consensus 88 ~--------~g~id~lv~nAg 100 (281)
T 3svt_A 88 W--------HGRLHGVVHCAG 100 (281)
T ss_dssp H--------HSCCCEEEECCC
T ss_pred H--------cCCCCEEEECCC
Confidence 2 357899887653
No 468
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.94 E-value=2.4 Score=32.19 Aligned_cols=83 Identities=12% Similarity=0.061 Sum_probs=52.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc--hh------HHHHHH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--LP------LLDQLI 88 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~------~~~~~~ 88 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+. .++.++..|. .+ ......
T Consensus 10 l~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 456788888865 445555555442 367999999998887777666655432 3677777776 22 222232
Q ss_pred hhhhcccccCCCcccEEEEeCC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~ 110 (192)
.. .++.|+++..+.
T Consensus 88 ~~--------~g~id~lv~nAg 101 (252)
T 3f1l_A 88 VN--------YPRLDGVLHNAG 101 (252)
T ss_dssp HH--------CSCCSEEEECCC
T ss_pred Hh--------CCCCCEEEECCc
Confidence 22 468999987653
No 469
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.80 E-value=2.3 Score=31.91 Aligned_cols=83 Identities=16% Similarity=0.100 Sum_probs=53.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCc--hh------HHHHHH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--LP------LLDQLI 88 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~------~~~~~~ 88 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+. .++.++..|. .+ ..+.+.
T Consensus 12 l~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 12 LKGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-PQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-CCceEEEeccccCCHHHHHHHHHHHH
Confidence 356788888864 555555555542 357899999999888888777776653 4566666654 21 222222
Q ss_pred hhhhcccccCCCcccEEEEeCC
Q 029536 89 QDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 89 ~~~~~~~~~~~~~~D~v~id~~ 110 (192)
.. .++.|.++..+.
T Consensus 90 ~~--------~g~id~lv~nAg 103 (247)
T 3i1j_A 90 HE--------FGRLDGLLHNAS 103 (247)
T ss_dssp HH--------HSCCSEEEECCC
T ss_pred Hh--------CCCCCEEEECCc
Confidence 22 357899987653
No 470
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.73 E-value=2.5 Score=32.76 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=53.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC---CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP---DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
+..+|.-||+| .++..++..+. .+.+|+++|.+++..+.+++ .+... ....+..+.
T Consensus 5 ~~~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~------------ 63 (290)
T 3b1f_A 5 EEKTIYIAGLG--LIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD---EATADFKVF------------ 63 (290)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS---EEESCTTTT------------
T ss_pred ccceEEEEeeC--HHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc---cccCCHHHh------------
Confidence 34678889975 33333333221 14589999999877665443 33311 112222221
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhc-cCCCeEEE
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIEL-VKVGGVIG 132 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~-L~~gG~lv 132 (192)
-...|+|++-.+.....+.++.+.+. ++++.+++
T Consensus 64 ---~~~aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 64 ---AALADVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---GGGCSEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ---hcCCCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 13569999877655556777777777 88877665
No 471
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=89.69 E-value=1.8 Score=32.94 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=54.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCC-CceEEEeCCchhH------HHHHHh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------~~~~~~ 89 (192)
.+.+.+|-.|++. +.+..+++.+. .+.+|+.++.+++..+.+.+.+...... .++.++..|..+. .....+
T Consensus 5 ~~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQ-GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTS-HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 4567888888754 44444444432 2578999999998887777766654322 5788888886542 222222
Q ss_pred hhhcccccCCCcccEEEEeCC
Q 029536 90 DVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~ 110 (192)
. .++.|+++..+.
T Consensus 84 ~--------~g~iD~lvnnAg 96 (250)
T 3nyw_A 84 K--------YGAVDILVNAAA 96 (250)
T ss_dssp H--------HCCEEEEEECCC
T ss_pred h--------cCCCCEEEECCC
Confidence 2 357899887654
No 472
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=89.62 E-value=3.5 Score=28.04 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=51.7
Q ss_pred CcEEEEEeCCchhHHHHHHHHHH-cCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc--CcHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQK-AGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD--NYVNYHKR 120 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~--~~~~~~~~ 120 (192)
..+|..+|-++...+..+..+.. .+. .+.....+..+.+..+. ...+|+|++|.... .-.++++.
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~--~v~~~~~~~~~a~~~l~----------~~~~dlii~D~~l~~~~g~~~~~~ 72 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRPGY--AVVAEAADAGEAYRLYR----------ETTPDIVVMDLTLPGPGGIEATRH 72 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTSTTE--EEEEEESSHHHHHHHHH----------TTCCSEEEECSCCSSSCHHHHHHH
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCCCc--EEEEEeCCHHHHHHHHh----------cCCCCEEEEecCCCCCCHHHHHHH
Confidence 35789999999988888888865 332 22224566666666554 45799999997632 34566666
Q ss_pred HHhccCCCeEEEEeC
Q 029536 121 LIELVKVGGVIGYDN 135 (192)
Q Consensus 121 ~~~~L~~gG~lv~~d 135 (192)
+.+.-..--+|++.+
T Consensus 73 l~~~~~~~~ii~ls~ 87 (153)
T 3cz5_A 73 IRQWDGAARILIFTM 87 (153)
T ss_dssp HHHHCTTCCEEEEES
T ss_pred HHHhCCCCeEEEEEC
Confidence 665433334565543
No 473
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=89.57 E-value=2.7 Score=32.13 Aligned_cols=88 Identities=14% Similarity=0.129 Sum_probs=53.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcc
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSST 94 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~ 94 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+.......++.++..|..+. +..+.+++..
T Consensus 11 l~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~- 88 (267)
T 1iy8_A 11 FTDRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE- 88 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH-
Confidence 356788888864 555666555442 35789999999887766665555442234688888886542 2222111000
Q ss_pred cccCCCcccEEEEeCC
Q 029536 95 KEKYHGTFDFVFVDAD 110 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~ 110 (192)
..+++|.++..+.
T Consensus 89 ---~~g~id~lv~nAg 101 (267)
T 1iy8_A 89 ---RFGRIDGFFNNAG 101 (267)
T ss_dssp ---HHSCCSEEEECCC
T ss_pred ---HcCCCCEEEECCC
Confidence 0357899887653
No 474
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.51 E-value=2.2 Score=33.04 Aligned_cols=82 Identities=17% Similarity=0.103 Sum_probs=54.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. ++....+
T Consensus 30 l~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 30 LSGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456788888865 444555554442 36799999999988877777776654 4688888886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.+++|+++..+.
T Consensus 107 --------~g~iD~lvnnAg 118 (276)
T 3r1i_A 107 --------LGGIDIAVCNAG 118 (276)
T ss_dssp --------HSCCSEEEECCC
T ss_pred --------cCCCCEEEECCC
Confidence 357999987654
No 475
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=89.47 E-value=3.7 Score=28.00 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=52.2
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc--CcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD--NYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~--~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...+. .+. ...+..+.+..+. ...+|+|++|.... +-.++++.+
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dlvi~d~~l~~~~g~~~~~~l 73 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGC--NII-TFTSPLDALEALK----------GTSVQLVISDMRMPEMGGEVFLEQV 73 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC--EEE-EESCHHHHHHHHT----------TSCCSEEEEESSCSSSCHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh----------cCCCCEEEEecCCCCCCHHHHHHHH
Confidence 46899999999999988988887654 343 4556666666553 45799999997632 345666666
Q ss_pred HhccCCCeEEEEe
Q 029536 122 IELVKVGGVIGYD 134 (192)
Q Consensus 122 ~~~L~~gG~lv~~ 134 (192)
.+.-..--+|++.
T Consensus 74 ~~~~~~~~ii~ls 86 (154)
T 2rjn_A 74 AKSYPDIERVVIS 86 (154)
T ss_dssp HHHCTTSEEEEEE
T ss_pred HHhCCCCcEEEEe
Confidence 5543323355553
No 476
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.41 E-value=4.2 Score=34.19 Aligned_cols=108 Identities=16% Similarity=0.061 Sum_probs=69.1
Q ss_pred HHHHHHHHhHc-CCCEEEEEccchhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchh--HH
Q 029536 8 AQFFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LL 84 (192)
Q Consensus 8 ~~~l~~l~~~~-~~~~ileiG~g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~ 84 (192)
.+++..+-... +.++|+-+|. |..+..+|+.+.....+..+|.+++..+...+.+ ++..+++||+.+ ++
T Consensus 222 ~~~~~~~g~~~~~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td~~~L 293 (461)
T 4g65_A 222 RSVMSELQRLEKPYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAADQELL 293 (461)
T ss_dssp HHHHHHTTGGGSCCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTCHHHH
T ss_pred HHHHHhhccccccccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CCceEEeccccchhhH
Confidence 34444443333 3578988876 6677788888776789999999998776665543 468899999866 33
Q ss_pred HHHHhhhhcccccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEE
Q 029536 85 DQLIQDVSSTKEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 133 (192)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~ 133 (192)
.+- .-...|+++.-...+...-+...+.+.+...-++..
T Consensus 294 ~ee----------~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 294 TEE----------NIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp HHT----------TGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred hhc----------CchhhcEEEEcccCcHHHHHHHHHHHHcCCcccccc
Confidence 332 135789988765544333333444455555555544
No 477
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.40 E-value=0.95 Score=37.96 Aligned_cols=109 Identities=16% Similarity=0.262 Sum_probs=57.1
Q ss_pred CCEEEEEccchhHHHHHHHHhCCC-CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHH--hhhhcccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI--QDVSSTKE 96 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~~~~~~ 96 (192)
+...--||. |++++.+|..+.. +.+|+++|++++.++..++ +. ..+..-...+.+.+.. ..+.-|.+
T Consensus 11 ~~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~-----g~---~pi~epgl~~ll~~~~~~g~l~~ttd 80 (431)
T 3ojo_A 11 GSKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN-----GQ---ISIEEPGLQEVYEEVLSSGKLKVSTT 80 (431)
T ss_dssp -CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----TC---CSSCCTTHHHHHHHHHHTTCEEEESS
T ss_pred CCccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC-----CC---CCcCCCCHHHHHHhhcccCceEEeCc
Confidence 445556666 5555555544432 4689999999988775543 11 1111111222222210 00111111
Q ss_pred cCCCcccEEEEeCC-Cc-----------CcHHHHHHHHhccCCCeEEEEeCccCCc
Q 029536 97 KYHGTFDFVFVDAD-KD-----------NYVNYHKRLIELVKVGGVIGYDNTLWGG 140 (192)
Q Consensus 97 ~~~~~~D~v~id~~-~~-----------~~~~~~~~~~~~L~~gG~lv~~d~~~~g 140 (192)
...-|+||+.-+ +. ......+.+.+.|++|.+++..-+.+.|
T Consensus 81 --~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pg 134 (431)
T 3ojo_A 81 --PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPK 134 (431)
T ss_dssp --CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTT
T ss_pred --hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChh
Confidence 124689888644 11 1244556778899999988876555443
No 478
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.33 E-value=5.9 Score=30.18 Aligned_cols=82 Identities=11% Similarity=0.046 Sum_probs=49.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchh---HHHHHHHHHHcCCCCceEEEeCCchhH------HHHH
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEH---YEKGLPIIQKAGVAHKIDFREGPALPL------LDQL 87 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~---~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~ 87 (192)
.+.+.+|-.|++ |..+..+++.+. .+.+|+.++.+... .+...+.+... ..++.++..|..+. .+..
T Consensus 9 l~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 9 LKNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence 356788888875 445666666553 35789988765443 33334444433 35788888886542 2222
Q ss_pred HhhhhcccccCCCcccEEEEeCC
Q 029536 88 IQDVSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 88 ~~~~~~~~~~~~~~~D~v~id~~ 110 (192)
..+ .++.|+++..+.
T Consensus 86 ~~~--------~g~iD~lvnnAg 100 (262)
T 3ksu_A 86 EKE--------FGKVDIAINTVG 100 (262)
T ss_dssp HHH--------HCSEEEEEECCC
T ss_pred HHH--------cCCCCEEEECCC
Confidence 222 357899887654
No 479
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=89.32 E-value=3.3 Score=27.52 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=51.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc-------CcHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD-------NYVN 116 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~-------~~~~ 116 (192)
..+|..+|-++...+..+..+...+. .+. ...+..+.+..+. ...+|+|++|.... .-.+
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dlvi~d~~~~~~~~~~~~g~~ 69 (140)
T 2qr3_A 3 LGTIIIVDDNKGVLTAVQLLLKNHFS--KVI-TLSSPVSLSTVLR----------EENPEVVLLDMNFTSGINNGNEGLF 69 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTSS--EEE-EECCHHHHHHHHH----------HSCEEEEEEETTTTC-----CCHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCc--EEE-EeCCHHHHHHHHH----------cCCCCEEEEeCCcCCCCCCCccHHH
Confidence 35789999999998888888877654 333 4455666665554 45799999997633 3456
Q ss_pred HHHHHHhccCCCeEEEEe
Q 029536 117 YHKRLIELVKVGGVIGYD 134 (192)
Q Consensus 117 ~~~~~~~~L~~gG~lv~~ 134 (192)
+++.+.+....--+|++.
T Consensus 70 ~~~~l~~~~~~~~ii~ls 87 (140)
T 2qr3_A 70 WLHEIKRQYRDLPVVLFT 87 (140)
T ss_dssp HHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHhhCcCCCEEEEE
Confidence 666666543333456554
No 480
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=89.23 E-value=3.8 Score=27.83 Aligned_cols=78 Identities=9% Similarity=0.033 Sum_probs=51.6
Q ss_pred cEEEEEeCCchhHHHHHHHHHHcCCCCceEE-EeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHH
Q 029536 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDF-REGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRL 121 (192)
Q Consensus 45 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~ 121 (192)
-+|..+|-++...+..+..+...+. ...+ ...+..+.+..+. ...+|+|++|... .+-.++++.+
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~al~~l~----------~~~~dlii~D~~l~~~~g~~~~~~l 88 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPD--VESVLQAKNGQEAIQLLE----------KESVDIAILDVEMPVKTGLEVLEWI 88 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHT----------TSCCSEEEECSSCSSSCHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCC--cEEEEEECCHHHHHHHhh----------ccCCCEEEEeCCCCCCcHHHHHHHH
Confidence 4799999999998888888876542 2333 4456666666553 5679999999763 3345667776
Q ss_pred HhccCCCe-EEEEeC
Q 029536 122 IELVKVGG-VIGYDN 135 (192)
Q Consensus 122 ~~~L~~gG-~lv~~d 135 (192)
.+. .++. +|++.+
T Consensus 89 ~~~-~~~~~ii~ls~ 102 (150)
T 4e7p_A 89 RSE-KLETKVVVVTT 102 (150)
T ss_dssp HHT-TCSCEEEEEES
T ss_pred HHh-CCCCeEEEEeC
Confidence 654 3443 555543
No 481
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.01 E-value=2.2 Score=32.51 Aligned_cols=82 Identities=13% Similarity=0.057 Sum_probs=54.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+.+|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. +..+...
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 356788888764 555666655542 36789999999988877777776654 4788888886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|.++..+.
T Consensus 104 --------~g~id~lv~~Ag 115 (262)
T 3rkr_A 104 --------HGRCDVLVNNAG 115 (262)
T ss_dssp --------HSCCSEEEECCC
T ss_pred --------cCCCCEEEECCC
Confidence 357899887643
No 482
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.97 E-value=1.9 Score=33.28 Aligned_cols=86 Identities=12% Similarity=0.129 Sum_probs=52.3
Q ss_pred EEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCC
Q 029536 22 NTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHG 100 (192)
Q Consensus 22 ~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 100 (192)
+|.-||+ |.++..++..+. .+.+|+++|.+++..+.+. +.+... . ...+..+. .
T Consensus 2 ~i~iiG~--G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~----~~g~~~--~-~~~~~~~~----------------~ 56 (279)
T 2f1k_A 2 KIGVVGL--GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV----ERQLVD--E-AGQDLSLL----------------Q 56 (279)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG----------------T
T ss_pred EEEEEcC--cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCCc--c-ccCCHHHh----------------C
Confidence 5677887 444444444332 1358999999988766543 334321 1 12222211 2
Q ss_pred cccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 101 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 101 ~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
..|+|++-.+.....+.++.+.+.++++.+++
T Consensus 57 ~~D~vi~av~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 57 TAKIIFLCTPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp TCSEEEECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHhhCCCCCEEE
Confidence 57999987765556677777778888887665
No 483
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.96 E-value=6.8 Score=32.85 Aligned_cols=102 Identities=17% Similarity=0.147 Sum_probs=58.6
Q ss_pred CCCEEEEEccchhHHHHHHHHhCCC-CcEEEEEeCCchhHHHHHHHH------------HHcCCCCceEEEeCCchhHHH
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPII------------QKAGVAHKIDFREGPALPLLD 85 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~------------~~~~~~~~v~~~~~d~~~~~~ 85 (192)
...+|--||+ |+++..+|..+.. +.+|+++|++++.++..++.. ++.-...++++ ..|..+.
T Consensus 7 ~~~~~~vIGl--G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea-- 81 (446)
T 4a7p_A 7 GSVRIAMIGT--GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEG-- 81 (446)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH--
T ss_pred CceEEEEEcC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHH--
Confidence 3456777777 6666665554432 468999999998877554410 00000112222 2222111
Q ss_pred HHHhhhhcccccCCCcccEEEEeCC-Cc----------CcHHHHHHHHhccCCCeEEEEeCccC
Q 029536 86 QLIQDVSSTKEKYHGTFDFVFVDAD-KD----------NYVNYHKRLIELVKVGGVIGYDNTLW 138 (192)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~v~id~~-~~----------~~~~~~~~~~~~L~~gG~lv~~d~~~ 138 (192)
-...|+||+.-+ +. ...+.++.+.+.|++|.+++..-+..
T Consensus 82 -------------~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 132 (446)
T 4a7p_A 82 -------------VKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP 132 (446)
T ss_dssp -------------HTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC
T ss_pred -------------HhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 134699988633 21 24567778888999999888655443
No 484
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=88.84 E-value=2.9 Score=28.82 Aligned_cols=70 Identities=21% Similarity=0.227 Sum_probs=50.8
Q ss_pred CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCcC--cHHHHH
Q 029536 42 PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKDN--YVNYHK 119 (192)
Q Consensus 42 ~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~~--~~~~~~ 119 (192)
.++-+|..||-++...+..+..++..|+. +.....++.+-++.+. ...||+|++|...+. =.++++
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~--~v~~a~~g~~al~~~~----------~~~~DlillD~~MP~mdG~el~~ 77 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFN--NTQEADDGLTALPMLK----------KGDFDFVVTDWNMPGMQGIDLLK 77 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC--CEEEESSHHHHHHHHH----------HHCCSEEEEESCCSSSCHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEECCHHHHHHHHH----------hCCCCEEEEcCCCCCCCHHHHHH
Confidence 34568999999999999999999988863 3334567777666654 458999999987432 355666
Q ss_pred HHHh
Q 029536 120 RLIE 123 (192)
Q Consensus 120 ~~~~ 123 (192)
.++.
T Consensus 78 ~ir~ 81 (134)
T 3to5_A 78 NIRA 81 (134)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6653
No 485
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=88.77 E-value=3.6 Score=27.47 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=52.8
Q ss_pred CcEEEEEeCCchhHHHHHHHHHH-cCCCCceEEEeCCchhHHHHHHhhhhcccccCC-CcccEEEEeCCCc---CcHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQK-AGVAHKIDFREGPALPLLDQLIQDVSSTKEKYH-GTFDFVFVDADKD---NYVNYH 118 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~D~v~id~~~~---~~~~~~ 118 (192)
..+|..+|-++...+..+..+.. .++ .+. ...+..+.+..+. . ..+|+|++|.... +-.+++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~--~v~-~~~~~~~a~~~l~----------~~~~~dlvi~D~~l~~~~~g~~~~ 70 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEY--DFI-EVENLKKFYSIFK----------DLDSITLIIMDIAFPVEKEGLEVL 70 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCC--EEE-EECSHHHHHTTTT----------TCCCCSEEEECSCSSSHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCc--cEE-EECCHHHHHHHHh----------cCCCCcEEEEeCCCCCCCcHHHHH
Confidence 35799999999999999998887 655 344 4556666555542 4 6899999998744 234566
Q ss_pred HHHHh--ccCCCeEEEEeC
Q 029536 119 KRLIE--LVKVGGVIGYDN 135 (192)
Q Consensus 119 ~~~~~--~L~~gG~lv~~d 135 (192)
+.+.+ ....--+|++..
T Consensus 71 ~~l~~~~~~~~~~ii~ls~ 89 (140)
T 3lua_A 71 SAIRNNSRTANTPVIIATK 89 (140)
T ss_dssp HHHHHSGGGTTCCEEEEES
T ss_pred HHHHhCcccCCCCEEEEeC
Confidence 66655 333334666543
No 486
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.74 E-value=0.86 Score=36.73 Aligned_cols=103 Identities=8% Similarity=-0.013 Sum_probs=53.3
Q ss_pred cCCCEEEEEcc--chhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 18 ~~~~~ileiG~--g~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
.+.++||-+|+ +.|..+..+|+... ...+..++.++...+ ..+.+++.|.. . ++..+. ...+.+.+. +
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~-~~~~~~~lGa~-~--vi~~~~-~~~~~~~~~---~- 235 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQK-LSDRLKSLGAE-H--VITEEE-LRRPEMKNF---F- 235 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHH-HHHHHHHTTCS-E--EEEHHH-HHSGGGGGT---T-
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHH-HHHHHHhcCCc-E--EEecCc-chHHHHHHH---H-
Confidence 45689999996 58888888998763 234455555543221 12234455542 2 222110 000111100 0
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEEEeC
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 135 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv~~d 135 (192)
. ..+.+|+|| |+.-. .....+++.|+++|.++.-.
T Consensus 236 ~-~~~~~Dvvi-d~~g~---~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 K-DMPQPRLAL-NCVGG---KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp S-SSCCCSEEE-ESSCH---HHHHHHHTTSCTTCEEEECC
T ss_pred h-CCCCceEEE-ECCCc---HHHHHHHHhhCCCCEEEEEe
Confidence 0 012589875 44321 22345789999999988753
No 487
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.69 E-value=2.3 Score=32.54 Aligned_cols=83 Identities=10% Similarity=0.083 Sum_probs=54.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+.+.+.+...+- .++.++..|..+. ++....+
T Consensus 8 l~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 8 LQGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356788888764 455555555442 357999999999888777777765542 4788899886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 86 --------~g~id~lvnnAg 97 (262)
T 3pk0_A 86 --------FGGIDVVCANAG 97 (262)
T ss_dssp --------HSCCSEEEECCC
T ss_pred --------hCCCCEEEECCC
Confidence 357899987653
No 488
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=88.66 E-value=6.7 Score=29.94 Aligned_cols=108 Identities=16% Similarity=0.159 Sum_probs=62.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCC-chhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDIT-KEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQ 89 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 89 (192)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.. ++..+...+.+...+ .++.++..|..+. +.....
T Consensus 16 l~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 456788888865 445555555442 35788887764 455555555566544 4788889886542 222222
Q ss_pred hhhcccccCCCcccEEEEeCCC-------c----Cc-----------HHHHHHHHhccCCCeEEEEeCc
Q 029536 90 DVSSTKEKYHGTFDFVFVDADK-------D----NY-----------VNYHKRLIELVKVGGVIGYDNT 136 (192)
Q Consensus 90 ~~~~~~~~~~~~~D~v~id~~~-------~----~~-----------~~~~~~~~~~L~~gG~lv~~d~ 136 (192)
+ .++.|+++..+.. + .+ ....+.+.+.++++|.|++-..
T Consensus 93 ~--------~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 93 H--------FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp H--------HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred H--------cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 2 3578998865431 0 11 1123445677888887775433
No 489
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.58 E-value=7.2 Score=30.50 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=51.4
Q ss_pred cCCCEEEEEccc-hhHHHHHHHHhCCCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccc
Q 029536 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKE 96 (192)
Q Consensus 18 ~~~~~ileiG~g-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 96 (192)
.++++++-||+| .|......+..+ +.+|+++|.+++..+.+. +.+ ++.... ..++++
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~----~~g----~~~~~~---~~l~~~--------- 212 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARIT----EMG----LVPFHT---DELKEH--------- 212 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTT----CEEEEG---GGHHHH---------
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH----HCC----CeEEch---hhHHHH---------
Confidence 457899999985 333333344443 468999999986544332 223 222221 123333
Q ss_pred cCCCcccEEEEeCCCcCcHHHHHHHHhccCCCeEEE
Q 029536 97 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 132 (192)
Q Consensus 97 ~~~~~~D~v~id~~~~~~~~~~~~~~~~L~~gG~lv 132 (192)
-...|+|+...+..... +...+.+++|++++
T Consensus 213 --l~~aDvVi~~~p~~~i~---~~~~~~mk~g~~li 243 (300)
T 2rir_A 213 --VKDIDICINTIPSMILN---QTVLSSMTPKTLIL 243 (300)
T ss_dssp --STTCSEEEECCSSCCBC---HHHHTTSCTTCEEE
T ss_pred --hhCCCEEEECCChhhhC---HHHHHhCCCCCEEE
Confidence 34689998876643221 23457899998876
No 490
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=88.50 E-value=2.2 Score=32.55 Aligned_cols=82 Identities=17% Similarity=0.120 Sum_probs=53.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+++|-.|++. ..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. ++...+.
T Consensus 10 l~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAA-GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSS-HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3567888887654 44555554432 25789999999988877777776654 4788888886542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 87 --------~g~id~lv~nAg 98 (256)
T 3gaf_A 87 --------FGKITVLVNNAG 98 (256)
T ss_dssp --------HSCCCEEEECCC
T ss_pred --------cCCCCEEEECCC
Confidence 357899987653
No 491
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.40 E-value=1 Score=35.18 Aligned_cols=88 Identities=10% Similarity=-0.006 Sum_probs=54.7
Q ss_pred CCEEEEEccchhHHHHHHHHhCC----CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhccc
Q 029536 20 AKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTK 95 (192)
Q Consensus 20 ~~~ileiG~g~G~~~~~la~~~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 95 (192)
..+|.-||+| .++..++..+. +..+|+.+|.+++..+...+. .+ ++. ..+..+.
T Consensus 3 ~~~I~iIG~G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~~~------------ 60 (280)
T 3tri_A 3 TSNITFIGGG--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK---CG----VHT-TQDNRQG------------ 60 (280)
T ss_dssp CSCEEEESCS--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT---TC----CEE-ESCHHHH------------
T ss_pred CCEEEEEccc--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH---cC----CEE-eCChHHH------------
Confidence 3568888885 44444443321 123799999999877655542 23 332 2232222
Q ss_pred ccCCCcccEEEEeCCCcCcHHHHHHHHhc-cCCCeEEE
Q 029536 96 EKYHGTFDFVFVDADKDNYVNYHKRLIEL-VKVGGVIG 132 (192)
Q Consensus 96 ~~~~~~~D~v~id~~~~~~~~~~~~~~~~-L~~gG~lv 132 (192)
-...|+||+-..+....+.++.+.+. ++++.+++
T Consensus 61 ---~~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 61 ---ALNADVVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp ---HSSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred ---HhcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 13569999987777778888888887 87776665
No 492
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=88.32 E-value=4.5 Score=30.75 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=46.8
Q ss_pred CCCEEEEEccc-hhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhcc
Q 029536 19 NAKNTMEIGVF-TGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSST 94 (192)
Q Consensus 19 ~~~~ileiG~g-~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~ 94 (192)
+.+++|-.|++ .|..+..+++.+. .+.+|+.++.+++..+..++.....+ .+.++..|..+. ...+.+++..
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~- 82 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG---GALLFRADVTQDEELDALFAGVKE- 82 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT---CCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEECCCCCHHHHHHHHHHHHH-
Confidence 46789999875 2455555554432 25789999998763333333322222 367888886542 2222111000
Q ss_pred cccCCCcccEEEEeCC
Q 029536 95 KEKYHGTFDFVFVDAD 110 (192)
Q Consensus 95 ~~~~~~~~D~v~id~~ 110 (192)
..+++|.++..+.
T Consensus 83 ---~~g~iD~lv~~Ag 95 (261)
T 2wyu_A 83 ---AFGGLDYLVHAIA 95 (261)
T ss_dssp ---HHSSEEEEEECCC
T ss_pred ---HcCCCCEEEECCC
Confidence 0357899887654
No 493
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=88.23 E-value=4.2 Score=27.16 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=52.4
Q ss_pred cEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHHH
Q 029536 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRLI 122 (192)
Q Consensus 45 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~~ 122 (192)
.+|..+|-++...+..+..+...+. .+. ...+..+.+..+... ...+|+|++|... .+-.++++.+.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~a~~~~~~~--------~~~~dlvi~d~~l~~~~g~~~~~~l~ 72 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGN--EVL-TASSSTEGLRIFTEN--------CNSIDVVITDMKMPKLSGMDILREIK 72 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHHHT--------TTTCCEEEEESCCSSSCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHHhC--------CCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 5789999999999999998987764 232 445566665555321 4589999999873 23456667666
Q ss_pred hccCCCeEEEEeC
Q 029536 123 ELVKVGGVIGYDN 135 (192)
Q Consensus 123 ~~L~~gG~lv~~d 135 (192)
+.-..--+|++.+
T Consensus 73 ~~~~~~~ii~ls~ 85 (143)
T 3jte_A 73 KITPHMAVIILTG 85 (143)
T ss_dssp HHCTTCEEEEEEC
T ss_pred HhCCCCeEEEEEC
Confidence 5433234555543
No 494
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=88.21 E-value=4.5 Score=30.94 Aligned_cols=85 Identities=15% Similarity=0.062 Sum_probs=53.0
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH--HHHHHhhhhccc
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDVSSTK 95 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~ 95 (192)
+.+++|-+|+ +|..+..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++..|..+. +..+.+++.
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~--- 103 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVK--- 103 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH---
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHH---
Confidence 4578888875 4556666665542 35789999999887776666665543 4788888886542 222211100
Q ss_pred ccCCCcccEEEEeCC
Q 029536 96 EKYHGTFDFVFVDAD 110 (192)
Q Consensus 96 ~~~~~~~D~v~id~~ 110 (192)
...+++|.++..+.
T Consensus 104 -~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 -AEIGDVSILVNNAG 117 (272)
T ss_dssp -HHTCCCSEEEECCC
T ss_pred -HHCCCCcEEEECCC
Confidence 00357899987654
No 495
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=88.16 E-value=4.5 Score=28.73 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=53.8
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~ 121 (192)
..+|..+|-++...+..+..+...|. .+ ....+..+.+..+. ...+|+|++|... .+-.++++.+
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~~~----------~~~~dlvl~D~~lp~~~g~~~~~~l 73 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERRGY--AV-RQAHNKDEALKLAG----------AEKFEFITVXLHLGNDSGLSLIAPL 73 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHT----------TSCCSEEEECSEETTEESHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHh----------hCCCCEEEEeccCCCccHHHHHHHH
Confidence 35899999999999999999988765 34 45566666666653 5679999999762 2345666666
Q ss_pred HhccCCCeEEEEeC
Q 029536 122 IELVKVGGVIGYDN 135 (192)
Q Consensus 122 ~~~L~~gG~lv~~d 135 (192)
.+.-..--+|++..
T Consensus 74 ~~~~~~~~ii~lt~ 87 (184)
T 3rqi_A 74 CDLQPDARILVLTG 87 (184)
T ss_dssp HHHCTTCEEEEEES
T ss_pred HhcCCCCCEEEEeC
Confidence 65432233555543
No 496
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=88.08 E-value=4.3 Score=27.07 Aligned_cols=84 Identities=10% Similarity=-0.091 Sum_probs=52.0
Q ss_pred cEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCC--cCcHHHHHHHH
Q 029536 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADK--DNYVNYHKRLI 122 (192)
Q Consensus 45 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~--~~~~~~~~~~~ 122 (192)
.+|..+|-++...+..+..+...+... ......+..+.+..+... ......+|+|++|... .+-.++++.+.
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~~~~~-~v~~~~~~~~a~~~l~~~-----~~~~~~~dlvi~D~~l~~~~g~~~~~~l~ 83 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMTHRVE-EIQSVTSGNAAINKLNEL-----YAAGRWPSIICIDINMPGINGWELIDLFK 83 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCCEE-EEEEESSHHHHHHHHHHH-----HTSSCCCSEEEEESSCSSSCHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCCCe-eeeecCCHHHHHHHHHHh-----hccCCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 579999999988888888888765421 223445666666555421 0002689999999873 23456677776
Q ss_pred h----ccCCCeEEEEe
Q 029536 123 E----LVKVGGVIGYD 134 (192)
Q Consensus 123 ~----~L~~gG~lv~~ 134 (192)
+ ....--+|++.
T Consensus 84 ~~~~~~~~~~~ii~~t 99 (146)
T 3ilh_A 84 QHFQPMKNKSIVCLLS 99 (146)
T ss_dssp HHCGGGTTTCEEEEEC
T ss_pred HhhhhccCCCeEEEEe
Confidence 5 23333455553
No 497
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=87.88 E-value=4.8 Score=27.39 Aligned_cols=79 Identities=13% Similarity=0.096 Sum_probs=51.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhHHHHHHhhhhcccccCCCcccEEEEeCCCc--CcHHHHHHH
Q 029536 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDVSSTKEKYHGTFDFVFVDADKD--NYVNYHKRL 121 (192)
Q Consensus 44 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~~~D~v~id~~~~--~~~~~~~~~ 121 (192)
..++..+|-++...+..+..+...|. .+. ...+..+.+..+. ...+|+|++|.... .-.++++.+
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----------~~~~dliild~~l~~~~g~~~~~~l 69 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGF--TVS-SFASATEALAGLS----------ADFAGIVISDIRMPGMDGLALFRKI 69 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHTCC----------TTCCSEEEEESCCSSSCHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCc--EEE-EECCHHHHHHHHH----------hCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 35789999999999988988887665 343 4455555555442 45799999997632 345666666
Q ss_pred HhccCCCeEEEEeC
Q 029536 122 IELVKVGGVIGYDN 135 (192)
Q Consensus 122 ~~~L~~gG~lv~~d 135 (192)
......--+|++.+
T Consensus 70 ~~~~~~~pii~ls~ 83 (155)
T 1qkk_A 70 LALDPDLPMILVTG 83 (155)
T ss_dssp HHHCTTSCEEEEEC
T ss_pred HhhCCCCCEEEEEC
Confidence 55433334565543
No 498
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.81 E-value=2.9 Score=32.16 Aligned_cols=81 Identities=17% Similarity=0.045 Sum_probs=53.0
Q ss_pred CCCEEEEEccchhHHHHHHHHhC-CCCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAI-PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQDV 91 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~~ 91 (192)
..+++|-.|++ |+.+..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|..+. .......
T Consensus 3 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~- 78 (264)
T 3tfo_A 3 MDKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDT- 78 (264)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 45778888765 44455555444 236789999999988887777776654 4688888886542 2222222
Q ss_pred hcccccCCCcccEEEEeCC
Q 029536 92 SSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 79 -------~g~iD~lVnnAG 90 (264)
T 3tfo_A 79 -------WGRIDVLVNNAG 90 (264)
T ss_dssp -------HSCCCEEEECCC
T ss_pred -------cCCCCEEEECCC
Confidence 357899887653
No 499
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.77 E-value=2.9 Score=32.48 Aligned_cols=82 Identities=24% Similarity=0.154 Sum_probs=52.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhh
Q 029536 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQD 90 (192)
Q Consensus 18 ~~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 90 (192)
.+.+.+|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+. +......
T Consensus 26 ~~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456788888865 444555554442 36799999999887777666665433 4788888887542 2222222
Q ss_pred hhcccccCCCcccEEEEeCC
Q 029536 91 VSSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 91 ~~~~~~~~~~~~D~v~id~~ 110 (192)
.++.|+++..+.
T Consensus 103 --------~g~iD~lVnnAg 114 (283)
T 3v8b_A 103 --------FGHLDIVVANAG 114 (283)
T ss_dssp --------HSCCCEEEECCC
T ss_pred --------hCCCCEEEECCC
Confidence 357999887643
No 500
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=87.73 E-value=2.1 Score=33.58 Aligned_cols=82 Identities=10% Similarity=0.031 Sum_probs=53.2
Q ss_pred CCCEEEEEccchhHHHHHHHHhCC-CCcEEEEEeCCchhHHHHHHHHHHcCCCCceEEEeCCchhH------HHHHHhhh
Q 029536 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQDV 91 (192)
Q Consensus 19 ~~~~ileiG~g~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~~ 91 (192)
+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+. .++.++..|..+. .+...++
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~- 116 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDA- 116 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHH-
Confidence 45678877764 445555555442 367999999999887777766655442 4788899987542 2222222
Q ss_pred hcccccCCCcccEEEEeCC
Q 029536 92 SSTKEKYHGTFDFVFVDAD 110 (192)
Q Consensus 92 ~~~~~~~~~~~D~v~id~~ 110 (192)
.+++|+++..+.
T Consensus 117 -------~g~iD~lvnnAg 128 (293)
T 3rih_A 117 -------FGALDVVCANAG 128 (293)
T ss_dssp -------HSCCCEEEECCC
T ss_pred -------cCCCCEEEECCC
Confidence 357899887653
Done!