BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029537
MKMVLKYIEDMDLRRWSLPDINAFRIGLREWRSKLNCITNPYIYKQLLEINSVDLIAKGN
SDISSRQSAANKFLDKVFRVRLGRGFYGECLGVRADGNSYLSDEIGKQLSARSAAAGLRP
IGAVIYMQRNNLKMCLRSTDSATDTSEIAKAYGGGGSASSSSFIIRMDEYNQWLSVNASR
WSKGMMHHFVKY

High Scoring Gene Products

Symbol, full name Information P value
AT5G09580 protein from Arabidopsis thaliana 5.0e-60
AT1G53345 protein from Arabidopsis thaliana 1.3e-20

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029537
        (192 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2144786 - symbol:AT5G09580 "AT5G09580" species...   615  5.0e-60   1
TAIR|locus:505006182 - symbol:AT1G53345 "AT1G53345" speci...   243  1.3e-20   1


>TAIR|locus:2144786 [details] [associations]
            symbol:AT5G09580 "AT5G09580" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 EMBL:AL353994 EMBL:DQ492238
            IPI:IPI00547174 PIR:T49940 RefSeq:NP_196520.1 UniGene:At.54787
            ProteinModelPortal:Q9LXC3 EnsemblPlants:AT5G09580.1 GeneID:830817
            KEGG:ath:AT5G09580 TAIR:At5g09580 InParanoid:Q9LXC3 OMA:SFIIRMD
            PhylomeDB:Q9LXC3 ProtClustDB:CLSN2916883 Genevestigator:Q9LXC3
            Uniprot:Q9LXC3
        Length = 393

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 117/177 (66%), Positives = 141/177 (79%)

Query:     1 MKMVLKYIEDMDLRRWSLPDINAFRIGLREWRSKLNCITNPYIYKQLLEINSVDLIAKGN 60
             ++ VL YIED+DLRRW LPDI AF  GL++WRS++NCI NPY+Y+QLL+I+S DLIA GN
Sbjct:   215 VESVLDYIEDIDLRRWMLPDIKAFSFGLKDWRSRINCIINPYMYEQLLKISSADLIAYGN 274

Query:    61 SDISSRQSAANKFL--DKVFRVRLGRGFYGECLGVRADGNSYLSDEIGKQLSARSAAAGL 118
             S  SSR   A K L  +K F++RLGRG YGECLG+RADGN  LSDE+GK LS +S+AAGL
Sbjct:   275 SYFSSRLIDAKKLLKLNKAFKIRLGRGLYGECLGMRADGNHQLSDELGKLLSLQSSAAGL 334

Query:   119 RPIGAVIYMQRNNLKMCLRSTDSATDTSEIAKAYXXXXXXXXXXFIIRMDEYNQWLS 175
             RPIGAV ++QRNNLKMCLRSTD+ T+TSE+AKAY          FIIRMDEYNQW+S
Sbjct:   335 RPIGAVTFVQRNNLKMCLRSTDAITNTSEVAKAYGGGGTSSSSSFIIRMDEYNQWIS 391


>TAIR|locus:505006182 [details] [associations]
            symbol:AT1G53345 "AT1G53345" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP002684 IPI:IPI00533391 RefSeq:NP_564629.1 UniGene:At.37421
            ProteinModelPortal:F4HRG2 PRIDE:F4HRG2 EnsemblPlants:AT1G53345.1
            GeneID:841770 KEGG:ath:AT1G53345 OMA:HAQACGF Uniprot:F4HRG2
        Length = 325

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 53/179 (29%), Positives = 94/179 (52%)

Query:     1 MKMVLKYIEDMDLRRWSLPDINAFRIGLREWRSKLNCITNPYIYKQLLEINSVDLIAKGN 60
             M+ V +YIED D+ +W LP+  AF  G+ + + + +   N  ++ QLL ++   +I +G 
Sbjct:   145 MRRVFEYIEDADIWKWELPESKAFNSGILDLKIEYDFNKNQSLFDQLLSLDHESVINRGK 204

Query:    61 SDISSRQSAANKFLDKVFRVRLGRGF-YGECLGVRADGNSYLSDEIGKQLSARSAAAGLR 119
               +S +    ++ L++ + + LG    +G CL V AD  + L  E+G QL+ +S    LR
Sbjct:   205 QSLSKKHKLIHEVLEQSYEIVLGGDEEFGRCLAVNADEITELRSELGNQLAEKSKNLSLR 264

Query:   120 PIGAVIYM-----QRNNLKMCLRSTDSATDTSEIAKAYXXXXXXXXXXFIIRMDEYNQW 173
              +GAV+Y        N LK+ LRS  +  DT+ +++ +          F++   E+ QW
Sbjct:   265 GVGAVVYRVPELGDENKLKISLRSV-AEEDTTPVSQRFGGGGHKNASSFLLNSMEFEQW 322


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      192       182   0.00098  109 3  11 22  0.39    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  166 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.51u 0.11s 14.62t   Elapsed:  00:00:01
  Total cpu time:  14.51u 0.11s 14.62t   Elapsed:  00:00:01
  Start:  Sat May 11 01:06:27 2013   End:  Sat May 11 01:06:28 2013

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