BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029539
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L8W0|ALIS5_ARATH ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1
SV=1
Length = 350
Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 150/180 (83%), Gaps = 1/180 (0%)
Query: 8 DPIIPCGLIAWSLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGD-VG 66
+PI+PCGL+AWSLFNDTY FS + L VNK+ I+W SD+ KFG +VFPKNFQ G +G
Sbjct: 167 EPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIG 226
Query: 67 GKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYNTYDFKG 126
G +LN S PLSEQEDLIVWMRTAAL TFRKLYGKIE DL A D ITV+++NNYNTY F G
Sbjct: 227 GGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNG 286
Query: 127 TKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSYLSWNRNS 186
K LVLSTTSW+GG+NDFLG+ ++T+G ICLFLA+TF +LY++KPR LGDPSYLSWNR++
Sbjct: 287 QKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSA 346
>sp|Q9SA35|ALIS4_ARATH Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4
PE=2 SV=2
Length = 336
Score = 270 bits (689), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 124/180 (68%), Positives = 150/180 (83%), Gaps = 1/180 (0%)
Query: 8 DPIIPCGLIAWSLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGD-VG 66
PI+PCGL+AWSLFNDTY F+ + L VNK+DI+W SD+ KFG +VFPKNFQ G +G
Sbjct: 153 QPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKFGKNVFPKNFQKGSLIG 212
Query: 67 GKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYNTYDFKG 126
GKSL+ IPLSEQEDLIVWMRTAAL TFRKLYGKI+ DLQA D I V+++NNYNTY F G
Sbjct: 213 GKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNG 272
Query: 127 TKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSYLSWNRNS 186
K LVLSTTSW+GG+NDFLG+ ++T+G ICLFLA++F +LY+ KPR LGDPSYLSWNR++
Sbjct: 273 KKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAKPRQLGDPSYLSWNRSA 332
>sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1
SV=1
Length = 349
Score = 263 bits (672), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 8 DPIIPCGLIAWSLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGDV-G 66
PI+PCGLIAWSLFNDTY S L VNK+ IAW SDK +KFG VFPKNFQ G++ G
Sbjct: 167 QPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITG 226
Query: 67 GKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYNTYDFKG 126
G +L+ IPLSEQEDLIVWMRTAAL TFRKLYGKIE DL+ D I V + NNYNTY F G
Sbjct: 227 GATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNG 286
Query: 127 TKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSYLSWNRN 185
K LVLSTTSW+GGKNDFLG+ ++T+GGIC LA+ F ++Y++KPR LGDPSYLSWNRN
Sbjct: 287 KKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNRN 345
>sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1
SV=1
Length = 350
Score = 255 bits (652), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Query: 8 DPIIPCGLIAWSLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGDV-G 66
PI+PCGLIAWSLFNDTY S + L VNK+ IAW SDK +KFG +VFPKNFQ G++ G
Sbjct: 168 QPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTG 227
Query: 67 GKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYNTYDFKG 126
G SL+ + PLS+QEDLIVWMRTAAL TFRKLYGKIE DL+ + I V ++NNYNTY F G
Sbjct: 228 GASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSG 287
Query: 127 TKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSYLSWNR 184
K LVLSTTSW+GGKNDFLG+ ++T+GGIC LA+ F ++Y++KPR LGDP+YLSWNR
Sbjct: 288 KKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNR 345
>sp|Q67YS6|ALIS2_ARATH Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2
PE=2 SV=1
Length = 343
Score = 207 bits (527), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 137/185 (74%), Gaps = 4/185 (2%)
Query: 3 ETDNKDPIIPCGLIAWSLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQV 62
E+ N PI+PCGLIAWS+FNDT+ FS + L V++ +IAW SD+ +KFG +V+P NFQ
Sbjct: 159 ESSNGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQN 218
Query: 63 GD-VGGKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYNT 121
G +GG L+ IPLS+QED IVWMR AAL +FRKLYG+IE+DL+ V+ V + NNYNT
Sbjct: 219 GTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNT 278
Query: 122 YDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSYLS 181
Y F G K L+LST++W+GG+NDFLG+T++ +G + ++I F+LL++ PRP GD S
Sbjct: 279 YSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---S 335
Query: 182 WNRNS 186
WN+ S
Sbjct: 336 WNKKS 340
>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2
SV=1
Length = 372
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 3 ETDNKDPIIPCGLIAWSLFNDTYGFSVKGKDLKVN----KRDIAWGSDKNYKFGADVFPK 58
T+ PI PCG IA S+FNDT D + K+ IAW +DKN KF
Sbjct: 173 RTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITLIKKGIAWWTDKNVKFRNPKGDG 232
Query: 59 NFQVGDVGG-KSLNSSIPL----SE-------QEDLIVWMRTAALSTFRKLYGKIEDD-- 104
N G K +N P+ SE ED IVWMRTAAL TFRKLY IE
Sbjct: 233 NLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSN 292
Query: 105 ----LQANDVITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLA 160
LQA ++ I NY + F G K ++LST SW+GGKN FLG+ +IT+G IC FL
Sbjct: 293 LQPTLQAGKY-SLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITVGSICFFLG 351
Query: 161 ITFILLY 167
+ ++++
Sbjct: 352 VVLLIIH 358
>sp|Q1MTQ5|MUG89_SCHPO Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug89 PE=1 SV=1
Length = 396
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
Query: 5 DNKDPIIPCGLIAWSLFNDTYGFSVKGKD----LKVNKRDIAWGSDK------NYKFGAD 54
++ P PCGLIA SLFNDT+ S++ D + ++IAW SDK NY
Sbjct: 195 EDDKPYYPCGLIANSLFNDTFS-SLRLLDDNSVYTFSTKNIAWASDKRRFLKTNYSPDDV 253
Query: 55 VFPKNFQVGDVGGKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVV 114
P N+ + G + ++ LS E+L VWMRTA L TF KL + ++D +
Sbjct: 254 APPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKLAMRNDNDDIFPGTYEIK 313
Query: 115 IENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPL 174
I + F GTKSLVL+T S +GGKN FLG+ +I + +C+ L F L + I+PR L
Sbjct: 314 IGLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFIRPRKL 373
Query: 175 GDPSYLSWN 183
D YL+W+
Sbjct: 374 ADHRYLNWD 382
>sp|P53740|YN8S_YEAST Uncharacterized protein YNR048W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YNR048W PE=1 SV=1
Length = 393
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 10 IIPCGLIAWSLFNDTYGFSVKG----KDLKVNKRDIAWGSDKNYKFG------ADVFPKN 59
I PCGLIA S+FNDT+G ++ G D + + IAW +D ++++G +D+ P
Sbjct: 190 IFPCGLIANSMFNDTFGTTLTGVNDTADYLLTTKGIAWDTD-SHRYGKTEYNASDIVPPP 248
Query: 60 FQVGDVGGKSLNSSIP-LSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENN 118
+ +IP L E +WMRTAAL F KL K E + + IE N
Sbjct: 249 NWAKLFPNGYTDDNIPDLQNWEQFKIWMRTAALPNFYKLAMKNETNGLGKGIYIADIELN 308
Query: 119 YNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPS 178
Y F GTKS VL+T S IG N+ LG+ ++ + GI AI F++ + KPRP+ D S
Sbjct: 309 YPVRSFYGTKSFVLTTNSIIGAGNEALGIVYLIVAGIATLFAILFLIKVIFKPRPMHDHS 368
Query: 179 YLSWNRNSTP 188
YL++ + TP
Sbjct: 369 YLNFENSDTP 378
>sp|Q6AY41|CC50A_RAT Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2
SV=1
Length = 328
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 96/186 (51%), Gaps = 31/186 (16%)
Query: 9 PIIPCGLIAWSLFNDTYGFSVKGKD-------LKVNKRDIAWGSDKNYKF----GADVFP 57
PI PCG IA S+FNDT + + + + K+ IAW +DKN KF G D
Sbjct: 131 PIAPCGAIANSMFNDTLELFLVANESDPKPVPILLKKKGIAWWTDKNVKFRNPPGKDSLQ 190
Query: 58 KNFQVGDVGGKSLNSSIPLSE------------QEDLIVWMRTAALSTFRKLYGKIE--D 103
+ F+ K +N P+ E ED IVWMRTAAL TFRKLY IE D
Sbjct: 191 EKFKDT---TKPVNWHKPVYELDPDDESNNGFINEDFIVWMRTAALPTFRKLYRLIERTD 247
Query: 104 DLQAN---DVITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLA 160
DL + I NY + F G K ++LST SW+GGKN FLG+ +ITIG I L
Sbjct: 248 DLHPTLPAGQYYLNITYNYPVHFFDGRKRMILSTISWMGGKNPFLGIAYITIGSISFLLG 307
Query: 161 ITFILL 166
+ +++
Sbjct: 308 VVLLVI 313
>sp|Q8VEK0|CC50A_MOUSE Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1
Length = 364
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 9 PIIPCGLIAWSLFNDTYGFSVKGKD-------LKVNKRDIAWGSDKNYKF----GADVFP 57
PI PCG IA S+FNDT + + + + K+ IAW +DKN KF G +
Sbjct: 167 PIAPCGAIANSMFNDTLELYLVANESDPKPIPIPLKKKGIAWWTDKNVKFRNPPGKESLE 226
Query: 58 KNFQ--VGDVG-GKSLNSSIPLSEQ------EDLIVWMRTAALSTFRKLYGKIE--DDLQ 106
+ F+ + V K++ P E ED IVWMRTAAL TFRKLY IE DDL
Sbjct: 227 EKFKDTIKPVNWHKAVYELDPEDESNNGFINEDFIVWMRTAALPTFRKLYRLIERRDDLH 286
Query: 107 AN---DVITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITF 163
+ I NY + F G K ++LST SW+GGKN FLG+ +ITIG I L +
Sbjct: 287 PTLPAGQYFLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITIGSISFLLGVVL 346
Query: 164 ILL 166
+++
Sbjct: 347 LVI 349
>sp|Q9NV96|CC50A_HUMAN Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1
Length = 361
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 9 PIIPCGLIAWSLFNDTYGFSVKGKD-----LKVNKRDIAWGSDKNYKF----GADVFPKN 59
PI PCG IA S+FNDT + G D + + K+ IAW +DKN KF G D +
Sbjct: 167 PIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLEER 226
Query: 60 FQVGDVGGKSLNSSIPLSE--------QEDLIVWMRTAALSTFRKLYGKIEDDLQANDVI 111
F+ L L ED IVWMRTAAL TFRKLY IE + +
Sbjct: 227 FKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSDLHPTL 286
Query: 112 -----TVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILL 166
++ + NY + F G K ++LST SW+GGKN FLG+ +I +G I L + +++
Sbjct: 287 PAGRYSLNVTYNYPVHYFDGRKRMILSTISWMGGKNPFLGIAYIAVGSISFLLGVVLLVI 346
>sp|Q5R6C0|CC50A_PONAB Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1
Length = 361
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 96/180 (53%), Gaps = 22/180 (12%)
Query: 9 PIIPCGLIAWSLFNDTYGFSVKGKD-----LKVNKRDIAWGSDKNYKF----GADVFPKN 59
PI PCG IA S+FNDT + G D + + K+ IAW +DKN KF G D +
Sbjct: 167 PIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLKER 226
Query: 60 FQ-----VGDVGGKSLNSSIPLSE---QEDLIVWMRTAALSTFRKLYGKIEDDLQANDVI 111
F+ V + + S P + ED IVWMRTAAL TFRKLY IE + +
Sbjct: 227 FKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSDLHPTL 286
Query: 112 -----TVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILL 166
++ + NY + F G K ++LST SW+GGKN FLG+ +I +G I L + +++
Sbjct: 287 PAGRYSLNVTYNYPVHYFDGRKRMILSTISWMGGKNPFLGIAYIAVGSISFLLGVVLLVI 346
>sp|Q96WW4|IVN1_SCHPO Invasion protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ivn1 PE=3 SV=1
Length = 371
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 5 DNKDPIIPCGLIAWSLFNDTYGFSVKGKDL---------KVNKRDIAWGSDKN------Y 49
+ P PCG+IA SLFND+Y ++ + + AW D+ Y
Sbjct: 173 EEGKPYYPCGIIANSLFNDSYSSLLRYESFDSSNSLGLYNMTTNGTAWPEDRERYKKTKY 232
Query: 50 KFGADVFPKNFQVGDVGGKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQAND 109
V P N+ G + ++ +S + +WMR AAL TF KL +
Sbjct: 233 NASQIVPPPNWAKMFPNGYTDDNIPDVSTWDAFQIWMRAAALPTFSKLALRNVTTALQPG 292
Query: 110 VITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVI 169
+ + I N+ ++KGTK+++ STTS IGGKN FLG+ + IGG+C + + +I
Sbjct: 293 IYEMNITYNFPVTEYKGTKTIMFSTTSVIGGKNYFLGILYFVIGGLCAASGVILSIACLI 352
Query: 170 KPRPLGDPSYLSWNR 184
KPR +GDP YLSWNR
Sbjct: 353 KPRRVGDPRYLSWNR 367
>sp|P25656|CDC50_YEAST Cell division control protein 50 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC50 PE=1 SV=1
Length = 391
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 10 IIPCGLIAWSLFNDTYGFSVKG----KDLKVNKRDIAWGSDKNY----KFGAD--VFPKN 59
I PCGLIA S+FNDT+ + G +D + + I+W D++ K+ A V P N
Sbjct: 187 IYPCGLIANSMFNDTFSQVLSGIDDTEDYNLTNKHISWSIDRHRFKTTKYNASDIVPPPN 246
Query: 60 FQVGDVGGKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNY 119
+ G + + + E+ VWMRTAA F KL K E + IE NY
Sbjct: 247 WMKKYPDGYTDENLPDIHTWEEFQVWMRTAAFPKFYKLTLKNESASLPKGKYQMNIELNY 306
Query: 120 NTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSY 179
F GTKS VL+T IGG+N LGV ++ + G+C I F++ + +PR +GD +Y
Sbjct: 307 PISLFGGTKSFVLTTNGAIGGRNMSLGVLYLIVAGLCALFGIIFLVKLIFQPRAMGDHTY 366
Query: 180 LSW 182
L++
Sbjct: 367 LNF 369
>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1
Length = 353
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 9 PIIPCGLIAWSLFNDTYGFSVKGK------DLKVNKRDIAWGSDKNYKF-GADVFPKNFQ 61
PI PCG IA SLFND++ + + ++ +++ IAW +D + KF + +
Sbjct: 158 PIAPCGAIANSLFNDSFSLWHQRQPSDPFVEVPLDRTAIAWWTDYHVKFRNPPLVNGSLA 217
Query: 62 VGDVG-GKSLNSSIPLSE-----------QEDLIVWMRTAALSTFRKLYGKIEDDLQAND 109
+ G N P+ E +D +VWMRTAAL TFRKLY +I +
Sbjct: 218 LAFRGTAPPPNWHRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAG 277
Query: 110 V----ITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFIL 165
+ V I NY F G K ++LS SW+GGKN FLG+ ++ +G +C+ + ++
Sbjct: 278 LPRGTYRVNITYNYPVRAFGGHKLIILSNISWMGGKNPFLGIAYLVVGSLCIVMGFVMLV 337
Query: 166 LYV 168
+Y+
Sbjct: 338 VYI 340
>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1
Length = 351
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 9 PIIPCGLIAWSLFNDTYGFSVKGK------DLKVNKRDIAWGSDKNYKF-GADVFPKNFQ 61
PI PCG IA SLFND++ + + ++ +++ IAW +D + KF + +
Sbjct: 158 PIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLA 217
Query: 62 VGDVG-GKSLNSSIPLSE-----------QEDLIVWMRTAALSTFRKLYGKIEDDLQA-- 107
+ G N P+ E +D +VWMRTAAL TFRKLY +I +
Sbjct: 218 LAFQGTAPPPNWRRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAG 277
Query: 108 --NDVITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFIL 165
V I NY F G K L+ S+ SW+GGKN FLG+ ++ +G +C+ ++
Sbjct: 278 LPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLV 337
Query: 166 LYV 168
+Y+
Sbjct: 338 VYI 340
>sp|Q2T9P5|CC50C_BOVIN Cell cycle control protein 50C OS=Bos taurus GN=TMEM30C PE=2 SV=1
Length = 343
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 4 TDNKDPIIPCGLIAWSLFNDT----YGF-SVKGKDLKVNKRDIAWGSDKNYKFGADVFPK 58
+DN PI PCG IA S+FNDT Y F S + + + + AW +DK KF F +
Sbjct: 146 SDNGLPIAPCGAIANSMFNDTIVLWYNFNSSTHIRVPMVRTETAWWTDKYVKFQNPAF-Q 204
Query: 59 NFQVGDVG-GKSLNSSIPLSE------------QEDLIVWMRTAALSTFRKLY------G 99
N G K N P+ E +D IVWMRTAA F+KLY G
Sbjct: 205 NLSSAFAGTAKPPNWPKPVYELDENDPGNNGFINDDFIVWMRTAAFPNFKKLYRRLHRIG 264
Query: 100 KIEDDLQANDVITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFL 159
+ L A + +I N+ F+G K++VLST +W GG + FL + ++ G + L
Sbjct: 265 NFTEGLPAGSY-SFIINYNFPVSRFQGQKAVVLSTLTWSGGSSLFLALAYLVTGAVTLLA 323
Query: 160 AITFILLYV 168
+ + + L++
Sbjct: 324 SFSMMALHL 332
>sp|Q95JK4|CC50C_MACFA Cell cycle control protein 50C OS=Macaca fascicularis GN=TMEM30C
PE=2 SV=1
Length = 344
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 32/192 (16%)
Query: 4 TDNKDPIIPCGLIAWSLFNDTYGFSV---KGKDLKVN--KRDIAWGSDKNYKFG------ 52
+DNK PI+PCG IA S+FNDT S +KV K + W +DK KF
Sbjct: 146 SDNKTPIVPCGAIANSMFNDTIILSHNINSSVQIKVPMLKSGLTWWTDKYVKFQNPSSKN 205
Query: 53 -ADVF-----PKNFQ--VGDVGGKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDD 104
AD F P N+ + D+ K ++ L++ D IVWMR AA TF+KLYG++
Sbjct: 206 LADEFRGTTKPPNWPKPIYDLDKKDPRNNGFLND--DFIVWMRAAAFPTFKKLYGRLN-- 261
Query: 105 LQANDVITVVIENNYN---TYDF-----KGTKSLVLSTTSWIGGKNDFLGVTFITIGGIC 156
+ + I + NY+ TY+F +G KS+VLST +W GG + FLG+ + G I
Sbjct: 262 -RTHHFIEGLPAGNYSFNITYNFPVTRFQGEKSVVLSTLTWCGGNSLFLGLAYTVTGAIT 320
Query: 157 LFLAITFILLYV 168
+ T + +++
Sbjct: 321 WLASFTMMAIHI 332
>sp|Q9D4D7|CC50C_MOUSE Cell cycle control protein 50C OS=Mus musculus GN=Tmem30c PE=2 SV=2
Length = 342
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 26/193 (13%)
Query: 4 TDNKDPIIPCGLIAWSLFNDTYGFSVKGK-----DLKVNKRDIAWGSDKNYKFGADVFPK 58
+ N PIIPCG IA S+FNDT S ++ + K + W +DK KF +
Sbjct: 146 SHNDTPIIPCGAIANSIFNDTITLSYNLNSSTQIEVPMLKSGLTWWTDKYVKF-RNPRSS 204
Query: 59 NFQVGDVGG-KSLNSSIPLSE------------QEDLIVWMRTAALSTFRKLYGKIE--- 102
NF G K L+ + P+ E ED IVWMRTAA TF+KLY +++
Sbjct: 205 NFTSTFAGSSKPLHWAKPIYELDLDDPGNNGFLNEDFIVWMRTAAFPTFKKLYRRLKRVH 264
Query: 103 ---DDLQANDVITVVIENNYNTYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFL 159
+ L A + ++ I N+ F+G KS+VLST +WIGG FLG+T+ G + L
Sbjct: 265 AFAEGLPAGNY-SLSISYNFPVTMFQGEKSIVLSTLTWIGGGGLFLGLTYTVTGALTLLA 323
Query: 160 AITFILLYVIKPR 172
+ + ++++ R
Sbjct: 324 SFAILTIHLMLKR 336
>sp|P42838|LEM3_YEAST Alkylphosphocholine resistance protein LEM3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LEM3 PE=1
SV=1
Length = 414
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 12 PCGLIAWSLFNDTYGFSVK-----GKDLKVNKRDIAWGSDKN------YKFGADVFPKNF 60
PCGLIA S+FNDT+ + + + + I W SDK Y + P +
Sbjct: 230 PCGLIANSMFNDTFPLQLTNVGDTSNNYSLTNKGINWESDKKRYKKTKYNYTQIAPPPYW 289
Query: 61 QVGDVGGKSLNSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYN 120
+ G + + + + E+ WMR A KL ++D + I ++
Sbjct: 290 EKMYPDGYNETNIPDIQDWEEFQNWMRPGAFDKITKLIRINKNDTLPAGEYQLDIGLHWP 349
Query: 121 TYDFKGTKSLVLSTTSWIGGKNDFLGVTFITIGGICLFLAITFILLYVIKPRPLGDPSYL 180
+F G K + L+ S +GG+N FLG+ ++ G IC +A+ + ++ R + D S L
Sbjct: 350 VLEFNGKKGIYLTHGSHLGGRNPFLGIVYLIGGCICAAMALILLTFWLFGGRKIADASSL 409
Query: 181 SWN 183
SWN
Sbjct: 410 SWN 412
>sp|O42392|VDR_CHICK Vitamin D3 receptor OS=Gallus gallus GN=VDR PE=2 SV=1
Length = 451
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 12/141 (8%)
Query: 24 TYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGDVGGKS-----LNSSIP--- 75
T+ SV +D + +GSD F + P+ F D+ +S +N +P
Sbjct: 190 THSSSVVSQDFSSEDSNDVFGSDAFAAFPEPMEPQMFSNLDLSEESDESPSMNIELPHLP 249
Query: 76 -LSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENNYNTYDFKGTKSLVLST 134
L DL+ + + F K+ D L A D I ++ + + +S +
Sbjct: 250 MLPHLADLVSYSIQKVIG-FAKMIPGFRD-LTAEDQIALLKSSAIEVIMLRSNQSFTMED 307
Query: 135 TSWIGGKNDF-LGVTFITIGG 154
SW G NDF V+ +T G
Sbjct: 308 MSWTCGSNDFKYKVSDVTQAG 328
>sp|P04958|TETX_CLOTE Tetanus toxin OS=Clostridium tetani (strain Massachusetts / E88)
GN=tetX PE=1 SV=2
Length = 1315
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 6 NKDPIIPCGLIAWSLFNDTYGFSVKGKDLK 35
N DP+ L+ +++NDT GF+++ KDLK
Sbjct: 379 NHDPVKIPNLLDDTIYNDTEGFNIESKDLK 408
>sp|Q0C0D1|KATG_HYPNA Catalase-peroxidase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=katG PE=3 SV=1
Length = 723
Score = 31.2 bits (69), Expect = 4.7, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 8 DPIIPCGLIAW-SLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGAD 54
D I+ G IA+ S+ TYGFS +D+ ++D+ WG++K + +D
Sbjct: 153 DLILLSGTIAYESMGLKTYGFSFGREDIWAPEKDVYWGAEKEWLAPSD 200
>sp|A1TZH9|KATG_MARAV Catalase-peroxidase OS=Marinobacter aquaeolei (strain ATCC 700491 /
DSM 11845 / VT8) GN=katG PE=3 SV=1
Length = 723
Score = 30.8 bits (68), Expect = 5.7, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 8 DPIIPCGLIAW-SLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGDV 65
D II G +A+ S+ +YGFS +D+ ++DI WG++K + + P + + GDV
Sbjct: 152 DLIILAGTVAYESMGLPSYGFSFGREDIWHPEKDIYWGNEKEW-----LAPSDERYGDV 205
>sp|A1WUH1|KATG_HALHL Catalase-peroxidase OS=Halorhodospira halophila (strain DSM 244 /
SL1) GN=katG PE=3 SV=1
Length = 724
Score = 30.8 bits (68), Expect = 5.8, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 8 DPIIPCGLIAW-SLFNDTYGFSVKGKDLKVNKRDIAWGSDKNYKFGAD 54
D II G +A+ S+ T+GFS+ +D+ ++DI WGS+K + +D
Sbjct: 152 DLIILAGNVAYESMGLKTFGFSLGREDIWHPEKDIYWGSEKEWLAPSD 199
>sp|Q94IA6|C90D1_ARATH 3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana
GN=CYP90D1 PE=2 SV=1
Length = 491
Score = 30.0 bits (66), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 30 KGKDLKVNKRDIAWGSDKNYKFGADVFPKNFQVGDVGGKSLNSSIPLSEQEDLIVWMRTA 89
KG+DL+ KR+ +N+ G P NF G L+ S L +++++ +
Sbjct: 209 KGEDLEELKREF-----ENFISGLMSLPINFP-----GTQLHRS--LQAKKNMVKQVERI 256
Query: 90 ALSTFRKLYGKIEDDLQANDVITVVIENN 118
RK K EDD+ A DV+ V+++++
Sbjct: 257 IEGKIRKTKNKEEDDVIAKDVVDVLLKDS 285
>sp|Q13093|PAFA_HUMAN Platelet-activating factor acetylhydrolase OS=Homo sapiens
GN=PLA2G7 PE=1 SV=1
Length = 441
Score = 30.0 bits (66), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 71 NSSIPLSEQEDLIVWMRTAALSTFRKLYGKIEDDLQANDVITVVIENN----YNTYDFKG 126
NS + E+ L+V+ + L FR LY I DL ++ I +E+ TY FK
Sbjct: 135 NSPLRPGEKYPLVVF--SHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKD 192
Query: 127 TKSLVLSTTSWI 138
+ + SW+
Sbjct: 193 QSAAEIGDKSWL 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,732,865
Number of Sequences: 539616
Number of extensions: 3357931
Number of successful extensions: 7004
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6944
Number of HSP's gapped (non-prelim): 39
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)