BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029543
(192 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 116/202 (57%), Gaps = 60/202 (29%)
Query: 14 KIQNI-LKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPG---------- 62
+I+N+ +K EGS D V++KNLYLSCDPYM+ RM K++ S SF PG
Sbjct: 26 EIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMRKIEGSYVESFAPGSPITGYGVAK 84
Query: 63 ------------------------GVIMPSVT------------------------AFAG 74
+I P+ T A+AG
Sbjct: 85 VLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAG 144
Query: 75 LYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAF 134
+E+CSPKKGE V+VSAASGAVGQLVGQFAK+ GC+VVGSAGSKEKVDLLK+KFGFD+AF
Sbjct: 145 FHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAF 204
Query: 135 NYKEEPDLDVALKRMFLCWVDF 156
NYKEE DL ALKR F +D
Sbjct: 205 NYKEEQDLSAALKRYFPDGIDI 226
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 150 bits (380), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 106/194 (54%), Gaps = 63/194 (32%)
Query: 25 EGSKDTVLLKNLYLSCDPYMQKRMSKLDTS---LFYSFCPG------------------- 62
EG+ ++VL+KNLYLSCDPYM+ RM K D S L ++ PG
Sbjct: 36 EGT-NSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDY 94
Query: 63 ---------------GVIMPSVTA-------------------------FAGLYEICSPK 82
VI P A +AG YE+CSPK
Sbjct: 95 KKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPK 154
Query: 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL 142
+GE VYVSAASGAVGQLVGQ AK+ GC+VVGSAGSKEKVDLLK KFGFDDAFNYKEE DL
Sbjct: 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDL 214
Query: 143 DVALKRMFLCWVDF 156
ALKR F +D
Sbjct: 215 TAALKRCFPNGIDI 228
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 1 MDTSIRNTSKRLCKIQNILKQ---------NAAEGSKDTVLLKN----LYLSCDPYMQKR 47
+D +R SKRL + ++ Q N+A + VL ++ ++S ++K
Sbjct: 50 VDPYMRIASKRLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKL 109
Query: 48 MSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLA 107
+++ L S G + MP +TA+ GL E+C K GE V VSAA+GAVG +VGQ AKL
Sbjct: 110 LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK 169
Query: 108 GCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRM----FLCWVDFVGIEYCR 163
GC VVG+AGS EK+ LK + GFD AFNYK L+ ALK+ + C+ D VG E+
Sbjct: 170 GCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLN 228
Query: 164 S 164
+
Sbjct: 229 T 229
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 18/181 (9%)
Query: 1 MDTSIRNTSKRLCKIQNILKQNAAE--GSKDTVLLKNLYLSCDPY-----------MQKR 47
+D +R +KRL + ++ Q A+ SK+ L K + P ++K
Sbjct: 45 VDPYMRVAAKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKL 104
Query: 48 MSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLA 107
+++ ++ S G V MP +TA+ GL EIC K GE V V+AA+GAVG +VGQ AKL
Sbjct: 105 LTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLK 164
Query: 108 GCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRM----FLCWVDFVGIEYCR 163
GC VVG+ GS EKV L+ K GFD FNYK L+ LK+ + C+ D VG E+
Sbjct: 165 GCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSN 223
Query: 164 S 164
+
Sbjct: 224 T 224
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 18/181 (9%)
Query: 1 MDTSIRNTSKRLCKIQNILKQNAAE--GSKDTVLLKNLYLSCDPY-----------MQKR 47
+D +R +KRL + ++ Q A+ SK+ L K + P ++K
Sbjct: 66 VDPYMRVAAKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKL 125
Query: 48 MSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLA 107
+++ ++ S G V MP +TA+ GL EIC K GE V V+AA+GAVG +VGQ AKL
Sbjct: 126 LTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLK 185
Query: 108 GCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRM----FLCWVDFVGIEYCR 163
GC VVG+ GS EKV L+ K GFD FNYK L+ LK+ + C+ D VG E+
Sbjct: 186 GCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSN 244
Query: 164 S 164
+
Sbjct: 245 T 245
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 66 MPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125
M +TA+ L ++ PK GE V +S A+GAVG + GQ A+L GC VVG AG EK L
Sbjct: 132 MTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV 191
Query: 126 NKFGFDDAFNYKEEPDLDVALKR 148
+ GFD A +YK E DL LKR
Sbjct: 192 EELGFDGAIDYKNE-DLAAGLKR 213
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 64 VIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL 123
+++ TA+ L E+ +G+ V V+AA+G GQ Q +K A CHV+G+ S EK
Sbjct: 144 LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF 203
Query: 124 LKNKFGFDDAFNYKEEPDLDVALKRMFLCWVDFV 157
LK+ G D NYK EP + LK+ + VD V
Sbjct: 204 LKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVV 235
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 64 VIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL 123
+++ TA+ L E+ +G+ V V+AA+G GQ Q +K A CHV+G+ S EK
Sbjct: 152 LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF 211
Query: 124 LKNKFGFDDAFNYKEEPDLDVALKRMFLCWVDFV 157
LK+ G D NYK EP + LK+ + VD V
Sbjct: 212 LKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVV 243
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 64 VIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL 123
+++ TA+ L E+ +G+ V V+AA+G GQ Q +K A CHV+G+ S EK
Sbjct: 123 LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF 182
Query: 124 LKNKFGFDDAFNYKEEPDLDVALKRMFLCWVDFV 157
LK+ G D NYK EP + LK+ + VD V
Sbjct: 183 LKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVV 214
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 48 MSKLDTSL---FYSFCPGGVIMPSVTAFAGLYE--ICSPKKGEYVYVSAASGAVGQLVGQ 102
+ K+D L S+ G + MP +T+ G+ E S + + VS A+GA G L GQ
Sbjct: 116 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQ 175
Query: 103 FAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYK 137
L GC VVG G++EK L ++ GFD A NYK
Sbjct: 176 IGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYK 211
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 27 SKDTVLLKNLYLSCDPYMQKRMSKLDTSLFY 57
++ V ++ LYLS DPYM+ +M++ DT Y
Sbjct: 37 NEGQVQVRTLYLSVDPYMRCKMNE-DTGTDY 66
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 25 EGSKDTVLLKNLYLSC--DPYMQK------RMSKLDTSL---FYSFCPGGVIMPSVTAFA 73
E SK T L K +++ P+ K + K+D L S+ G + MP +T+
Sbjct: 84 EESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLI 143
Query: 74 GLYEICSPKKG--EYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGF 130
G+ E G + + VS A+GA G + GQ GC VVG G+ EK LL ++ GF
Sbjct: 144 GIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF 203
Query: 131 DDAFNYKEE 139
D A NYK++
Sbjct: 204 DAAINYKKD 212
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 19 LKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFY 57
L N EG V ++ LYLS DPYM+ RM++ DT Y
Sbjct: 31 LPDNINEGQ---VQVRTLYLSVDPYMRCRMNE-DTGTDY 65
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 25 EGSKDTVLLKNLYLSC--DPYMQK------RMSKLDTSL---FYSFCPGGVIMPSVTAFA 73
E SK T L K +++ P+ K + K+D L S+ G + MP +T+
Sbjct: 89 EESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLI 148
Query: 74 GLYEICSPKKG--EYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGF 130
G+ E G + + VS A+GA G + GQ GC VVG G+ EK LL ++ GF
Sbjct: 149 GIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF 208
Query: 131 DDAFNYKEE 139
D A NYK++
Sbjct: 209 DAAINYKKD 217
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 19 LKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFY 57
L N EG V ++ LYLS DPYM+ RM++ DT Y
Sbjct: 36 LPDNINEGQ---VQVRTLYLSVDPYMRCRMNE-DTGTDY 70
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 48 MSKLDTSL---FYSFCPGGVIMPSVTAFAGLYE--ICSPKKGEYVYVSAASGAVGQLVGQ 102
+ K+D L S+ G + P +T+ G+ E S + VS A+GA G L GQ
Sbjct: 126 LEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQ 185
Query: 103 FAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYK 137
L GC VVG G++EK L ++ GFD A NYK
Sbjct: 186 IGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYK 221
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 38 LSCDPYMQKRMSKLDTSLFYSFCPGGVI-MPSVTAFAGLYEICSPKKGEYVYVSAASGAV 96
L+ D + K KLD F G I +P TA+ L K GE V V ASG V
Sbjct: 130 LAADHTVYKLPEKLD------FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGV 183
Query: 97 GQLVGQFAKLAGCHVVGSAGSKEKVDL-LKNKFGFDDAFNYKEEPDLD 143
G Q A+ G ++G+AG++E + L+N G + FN++E +D
Sbjct: 184 GLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAHEVFNHREVNYID 229
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124
++ +TA + E KKG+YV + AA+G VG ++ Q K+ G H + A + EK+ +
Sbjct: 130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA 189
Query: 125 KNKFGFDDAFNYKEEPDLDVALK 147
K ++G + N +E L LK
Sbjct: 190 K-EYGAEYLINASKEDILRQVLK 211
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 57 YSFCPGGVIMP----------------SVTAFAGLYEICSPKKGEYVYVSAASGAVGQLV 100
Y P G++MP +TAF L+ + + + G+YV + A VG
Sbjct: 120 YVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAA 179
Query: 101 GQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALK 147
Q ++AG + +AGS++K+ + + K G FNYK+E + LK
Sbjct: 180 IQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKEDFSEATLK 225
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 57 YSFCPGGVIMP----------------SVTAFAGLYEICSPKKGEYVYVSAASGAVGQLV 100
Y P G++MP +TAF L+ + + + G+YV + A VG
Sbjct: 104 YVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAA 163
Query: 101 GQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALK 147
Q ++AG + +AGS++K+ + + K G FNYK+E + LK
Sbjct: 164 IQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKEDFSEATLK 209
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 63 GVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122
G+++ +TA L++ K G+YV + AA+G +G ++ +A+ G V+G+ ++EK +
Sbjct: 125 GLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAE 184
Query: 123 LLKNKFGFDDAFNYKEE 139
+ K G NY +
Sbjct: 185 TAR-KLGCHHTINYSTQ 200
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 69 VTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128
+TA+ + + + G+ V V AA V Q AKL G V+ +AGS++K+ K
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 129 GFDDAFNYKEEPDLDVALKRM 149
G D+ NY PD ++R+
Sbjct: 211 GADETVNYT-HPDWPKEVRRL 230
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 69 VTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128
+TA+ L E+ GE V + +A+G VG AK+ G + +AGS K ++L ++
Sbjct: 24 LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRL 82
Query: 129 GFD 131
G +
Sbjct: 83 GVE 85
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 35.0 bits (79), Expect = 0.028, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 70 TAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128
TA+ L + GE V + + SG VGQ A GC V + GS EK L+ +F
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARF 1712
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 66 MPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125
M VTA+ L+E+ + ++G V V +A G VGQ V Q V S K + +K
Sbjct: 125 MNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK 184
Query: 126 NKFG--FDDAFNYKEEPDLDVALKRMFLCWVDFV 157
+ FD +Y +E +KR+ VD V
Sbjct: 185 DSVTHLFDRNADYVQE------VKRISAEGVDIV 212
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL 142
G +V +S A+G +G L Q+AK G V+G G + K +L ++ G + ++ +E D+
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDI 227
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 70 TAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129
T +A L++ +GE V + + +G Q A+ G V +AGS K + + + G
Sbjct: 154 TVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLG 212
Query: 130 FDDAFNYKEEPDLDVALKRMFLCWVDFV 157
NY+ E D +K VD +
Sbjct: 213 AKRGINYRSE-DFAAVIKAETGQGVDII 239
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 37 YLSCDPYMQKRMSK-LDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGA 95
Y+ DP + K +D F P V+ VT + GL ++ K G++V +S G
Sbjct: 148 YVVADPNFVGHLPKNID---FNEIAP--VLCAGVTVYKGL-KVTDTKPGDWVVISGI-GG 200
Query: 96 VGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 141
+G + Q+A+ G +V K+DL + + G N K D
Sbjct: 201 LGHMAVQYARAMGLNVAAVDIDDRKLDLAR-RLGATVTVNAKTVAD 245
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 30.4 bits (67), Expect = 0.66, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 69 VTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA 115
+TA+ L ++ + GE + V +A+G VG Q A+ G V +A
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA 377
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 56 FYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA 115
F P ++ VT + GL + + + G++V +S G +G + Q+A+ G HV
Sbjct: 146 FAEIAP--ILCAGVTVYKGLKQ-TNARPGQWVAISGIGG-LGHVAVQYARAMGLHVAAID 201
Query: 116 GSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKR 148
K++L + K G N ++E ++ A++R
Sbjct: 202 IDDAKLELAR-KLGASLTVNARQEDPVE-AIQR 232
>pdb|3CCF|A Chain A, Crystal Structure Of Putative Methyltransferase
(Yp_321342.1) From Anabaena Variabilis Atcc 29413 At
1.90 A Resolution
pdb|3CCF|B Chain B, Crystal Structure Of Putative Methyltransferase
(Yp_321342.1) From Anabaena Variabilis Atcc 29413 At
1.90 A Resolution
Length = 279
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 75 LYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF---GFD 131
L ++ +P+ GE++ + G GQL + A+ +G V+G+ + ++ + + FD
Sbjct: 49 LLQLLNPQPGEFI-LDLGCG-TGQLTEKIAQ-SGAEVLGTDNAATXIEKARQNYPHLHFD 105
Query: 132 --DAFNYKEEPDLDVALKRMFLCWV 154
DA N++ + LD L WV
Sbjct: 106 VADARNFRVDKPLDAVFSNAXLHWV 130
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYK 137
G+ V + ASG VG Q K HV + S++ +L++ K G DD +YK
Sbjct: 184 GKRVLILGASGGVGTFAIQVMKAWDAHVT-AVCSQDASELVR-KLGADDVIDYK 235
>pdb|2V0R|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of
The Targeting Line-1 Retrotransposon Endonuclease
pdb|2V0R|B Chain B, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of
The Targeting Line-1 Retrotransposon Endonuclease
Length = 240
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 75 LYEICSPKKGEYVYVSAASGAVGQ-----LVGQFAKLAGC 109
+Y PK EY YV G V Q +VG A L+ C
Sbjct: 180 IYRTLHPKSTEYTYVRVRDGHVSQSKIDHIVGSKALLSKC 219
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 69 VTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128
+TA+ L E + G+ V V +G V Q AK G V+ ++ S+EK+D
Sbjct: 175 LTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLD-RAFAL 232
Query: 129 GFDDAFNYKEE 139
G D N EE
Sbjct: 233 GADHGINRLEE 243
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 59 FCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118
FC G VT + L ++ K GE+V + G +G + Q+AK G +VV
Sbjct: 147 FCAG------VTTYKAL-KVTGAKPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGD 198
Query: 119 EKVDLLKNKFGFDDAFN 135
EK++L K + G D N
Sbjct: 199 EKLELAK-ELGADLVVN 214
>pdb|3DLD|A Chain A, Crystal Structure Of Peptide Deformylase, Xoo1075, From
Xanthomonas Oryzae Pv. Oryzae Kacc10331
Length = 171
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 103 FAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 140
F + H VG A + VDL FGF+ + Y E P
Sbjct: 36 FETMGAAHGVGLAAPQIAVDLQLMVFGFEASERYPEAP 73
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 59 FCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118
FC G VT + L ++ K GE+V + G G + Q+AK G +VV
Sbjct: 147 FCAG------VTTYKAL-KVTGAKPGEWVAIYGIGG-FGHVAVQYAKAMGLNVVAVDIGD 198
Query: 119 EKVDLLKNKFGFDDAFN 135
EK++L K + G D N
Sbjct: 199 EKLELAK-ELGADLVVN 214
>pdb|3LLV|A Chain A, The Crystal Structure Of The Nad(P)-Binding Domain Of An
Exopolyphosphatase-Related Protein From Archaeoglobus
Fulgidus To 1.7a
Length = 141
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 82 KKGEYVYVSAASGAVGQLVGQFAKL--AGCHVVGSAGSKEKVDLLKNKFGFD 131
+ G Y Y+ S A G VG +L AG V+ SKEK++LL+++ GFD
Sbjct: 3 ENGRYEYIVIGSEAAG--VGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFD 51
>pdb|1ATG|A Chain A, Azotobacter Vinelandii Periplasmic Molybdate-Binding
Protein
Length = 231
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 94 GAVGQLVGQFAKLAGCHVVGSAGSKEKV 121
G + QL GQFAK G VV S+GS V
Sbjct: 12 GTLEQLAGQFAKQTGHAVVISSGSSGPV 39
>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|B Chain B, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|C Chain C, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|D Chain D, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
Length = 276
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122
+G+ V V+ AS +G+ + G HVV +A SKE +
Sbjct: 10 QGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQ 49
>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|B Chain B, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|C Chain C, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|D Chain D, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
Length = 277
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122
+G+ V V+ AS +G+ + G HVV +A SKE +
Sbjct: 10 QGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQ 49
>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|B Chain B, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|C Chain C, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|D Chain D, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
Length = 263
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122
+G+ V V+ AS +G+ + G HVV +A SKE +
Sbjct: 8 QGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQ 47
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKN 126
K+G+ V + ASG +G QFA G + + S +K ++ ++
Sbjct: 245 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRS 289
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 26.6 bits (57), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125
K+G+ V + ASG +G QFA G + + S +K ++ +
Sbjct: 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270
>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
pdb|1XSE|B Chain B, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
Length = 295
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122
+G+ V V+ AS +G+ + G HVV +A SKE +
Sbjct: 31 QGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQ 70
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 69 VTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128
+TA+ L + + GE V V AA+GA+G Q A+ G V+ +A EK+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 129 GFDDAFNYKEEPD 141
G ++A Y E P+
Sbjct: 170 GAEEAATYAEVPE 182
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 69 VTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128
+TA+ L + GE V V AA+GA+G Q A+ G V+ +A EK+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 129 GFDDAFNYKEEPD 141
G ++A Y E P+
Sbjct: 170 GAEEAATYAEVPE 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,444,636
Number of Sequences: 62578
Number of extensions: 220920
Number of successful extensions: 578
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 511
Number of HSP's gapped (non-prelim): 71
length of query: 192
length of database: 14,973,337
effective HSP length: 93
effective length of query: 99
effective length of database: 9,153,583
effective search space: 906204717
effective search space used: 906204717
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)