Query 029543
Match_columns 192
No_of_seqs 230 out of 1737
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 14:36:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029543.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029543hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2130 Putative NADP-dependen 100.0 1.9E-28 4.1E-33 190.1 16.1 165 16-182 27-253 (340)
2 COG1064 AdhP Zn-dependent alco 100.0 1.4E-28 3.1E-33 196.6 10.4 169 4-189 99-272 (339)
3 COG0604 Qor NADPH:quinone redu 99.9 4.3E-26 9.4E-31 184.6 19.8 165 16-182 15-245 (326)
4 KOG1197 Predicted quinone oxid 99.9 1.6E-26 3.5E-31 175.4 16.1 176 14-191 21-259 (336)
5 KOG0024 Sorbitol dehydrogenase 99.9 9.2E-25 2E-29 171.1 12.9 173 4-191 102-286 (354)
6 KOG1196 Predicted NAD-dependen 99.9 4.2E-23 9E-28 160.1 16.4 159 24-182 33-257 (343)
7 cd08295 double_bond_reductase_ 99.9 1.4E-21 3.1E-26 159.0 19.4 168 13-181 18-254 (338)
8 KOG0023 Alcohol dehydrogenase, 99.9 1.4E-22 3E-27 158.7 12.4 172 4-189 107-290 (360)
9 COG1063 Tdh Threonine dehydrog 99.9 4E-22 8.6E-27 163.1 14.1 171 4-188 95-280 (350)
10 TIGR02825 B4_12hDH leukotriene 99.9 2.3E-21 5E-26 156.9 18.3 165 16-181 19-240 (325)
11 PLN03154 putative allyl alcoho 99.9 4.7E-21 1E-25 156.8 20.0 118 65-182 140-262 (348)
12 PRK09880 L-idonate 5-dehydroge 99.9 8.1E-22 1.8E-26 160.9 12.7 166 5-188 99-276 (343)
13 COG1062 AdhC Zn-dependent alco 99.9 7.6E-21 1.6E-25 150.3 15.5 120 65-186 167-293 (366)
14 cd08294 leukotriene_B4_DH_like 99.9 4.5E-20 9.7E-25 149.1 19.1 165 14-180 19-243 (329)
15 cd08293 PTGR2 Prostaglandin re 99.9 5E-20 1.1E-24 150.0 19.1 115 65-180 134-256 (345)
16 TIGR03366 HpnZ_proposed putati 99.9 1.3E-20 2.7E-25 149.8 14.3 160 4-181 45-221 (280)
17 TIGR03201 dearomat_had 6-hydro 99.9 1E-20 2.2E-25 154.8 13.5 175 4-187 93-281 (349)
18 cd08281 liver_ADH_like1 Zinc-d 99.8 3.7E-20 7.9E-25 152.7 15.7 164 4-182 102-294 (371)
19 PLN02740 Alcohol dehydrogenase 99.8 5.6E-20 1.2E-24 152.1 14.5 165 5-183 107-305 (381)
20 TIGR02818 adh_III_F_hyde S-(hy 99.8 8.5E-20 1.8E-24 150.4 15.2 164 4-181 96-290 (368)
21 cd08239 THR_DH_like L-threonin 99.8 5E-20 1.1E-24 149.9 13.4 162 5-182 96-266 (339)
22 KOG1198 Zinc-binding oxidoredu 99.8 2E-19 4.4E-24 146.3 15.4 114 65-180 133-257 (347)
23 KOG0022 Alcohol dehydrogenase, 99.8 1.9E-19 4.1E-24 140.8 14.3 121 65-187 174-303 (375)
24 TIGR03451 mycoS_dep_FDH mycoth 99.8 1.9E-19 4E-24 147.8 14.7 164 5-182 96-280 (358)
25 PRK10309 galactitol-1-phosphat 99.8 1.5E-19 3.3E-24 147.5 14.1 165 5-186 95-268 (347)
26 TIGR02819 fdhA_non_GSH formald 99.8 2.5E-19 5.4E-24 148.8 15.2 165 4-180 102-301 (393)
27 PLN02586 probable cinnamyl alc 99.8 1.4E-19 3.1E-24 148.7 13.3 167 4-188 108-288 (360)
28 TIGR02822 adh_fam_2 zinc-bindi 99.8 1.6E-19 3.5E-24 146.6 13.4 156 4-181 98-257 (329)
29 cd08300 alcohol_DH_class_III c 99.8 6E-19 1.3E-23 145.3 15.2 164 4-181 97-291 (368)
30 PLN02827 Alcohol dehydrogenase 99.8 8.7E-19 1.9E-23 144.9 15.0 169 4-186 104-303 (378)
31 PLN02178 cinnamyl-alcohol dehy 99.8 6.9E-19 1.5E-23 145.4 13.7 167 4-188 102-283 (375)
32 cd08301 alcohol_DH_plants Plan 99.8 2.7E-18 5.8E-23 141.4 16.0 166 4-183 97-294 (369)
33 cd08233 butanediol_DH_like (2R 99.8 1.7E-18 3.6E-23 141.6 14.2 168 5-188 106-282 (351)
34 KOG0025 Zn2+-binding dehydroge 99.8 3.3E-18 7.1E-23 132.4 14.5 173 14-189 33-275 (354)
35 cd08277 liver_alcohol_DH_like 99.8 3.3E-18 7E-23 140.8 14.6 164 5-182 97-290 (365)
36 cd08296 CAD_like Cinnamyl alco 99.8 1.1E-17 2.5E-22 135.8 14.9 169 4-188 96-269 (333)
37 cd08237 ribitol-5-phosphate_DH 99.8 3.3E-18 7.2E-23 139.6 10.8 159 8-188 98-266 (341)
38 cd08292 ETR_like_2 2-enoyl thi 99.8 1.7E-16 3.7E-21 127.9 19.4 162 16-180 16-240 (324)
39 cd08231 MDR_TM0436_like Hypoth 99.8 3E-17 6.6E-22 134.6 14.8 163 5-181 102-283 (361)
40 cd08230 glucose_DH Glucose deh 99.8 3.5E-17 7.5E-22 134.1 15.1 158 5-182 98-273 (355)
41 cd08291 ETR_like_1 2-enoyl thi 99.7 2.4E-16 5.2E-21 127.5 19.3 114 65-182 126-246 (324)
42 cd08246 crotonyl_coA_red croto 99.7 3.9E-17 8.5E-22 135.6 14.9 165 5-181 123-318 (393)
43 PRK10754 quinone oxidoreductas 99.7 5.3E-16 1.1E-20 125.4 20.1 167 13-181 13-242 (327)
44 cd08265 Zn_ADH3 Alcohol dehydr 99.7 4.6E-17 1E-21 134.8 14.1 172 5-183 129-312 (384)
45 PLN02514 cinnamyl-alcohol dehy 99.7 5.4E-17 1.2E-21 133.2 13.7 166 5-187 106-284 (357)
46 PRK10083 putative oxidoreducta 99.7 8.1E-17 1.8E-21 130.8 13.4 161 5-182 95-263 (339)
47 cd08299 alcohol_DH_class_I_II_ 99.7 2.5E-16 5.4E-21 130.0 15.4 165 4-182 101-296 (373)
48 PRK09422 ethanol-active dehydr 99.7 1.7E-16 3.7E-21 128.8 14.1 164 6-183 97-266 (338)
49 cd08250 Mgc45594_like Mgc45594 99.7 2.3E-15 5.1E-20 121.7 19.7 115 65-181 121-240 (329)
50 TIGR01751 crot-CoA-red crotony 99.7 2.7E-16 5.9E-21 130.8 14.3 166 5-182 119-314 (398)
51 cd08285 NADP_ADH NADP(H)-depen 99.7 4.5E-16 9.7E-21 127.3 14.5 163 5-182 95-270 (351)
52 cd08243 quinone_oxidoreductase 99.7 4.9E-15 1.1E-19 118.8 20.1 113 65-181 124-241 (320)
53 PTZ00354 alcohol dehydrogenase 99.7 4.1E-15 8.9E-20 120.1 19.6 115 65-181 122-243 (334)
54 cd05284 arabinose_DH_like D-ar 99.7 5.2E-16 1.1E-20 126.1 14.2 161 5-181 99-269 (340)
55 cd08256 Zn_ADH2 Alcohol dehydr 99.7 7.5E-16 1.6E-20 125.9 15.1 163 5-183 106-279 (350)
56 cd08278 benzyl_alcohol_DH Benz 99.7 1.2E-15 2.6E-20 125.6 14.7 143 24-180 138-287 (365)
57 TIGR02817 adh_fam_1 zinc-bindi 99.7 7.3E-15 1.6E-19 119.1 19.2 111 65-178 125-247 (336)
58 cd08260 Zn_ADH6 Alcohol dehydr 99.7 1.6E-15 3.4E-20 123.6 15.3 164 5-182 96-268 (345)
59 cd05282 ETR_like 2-enoyl thioe 99.7 6.8E-15 1.5E-19 118.4 18.6 116 65-182 120-241 (323)
60 PRK05396 tdh L-threonine 3-deh 99.7 1E-15 2.3E-20 124.6 13.8 165 4-185 98-270 (341)
61 cd08287 FDH_like_ADH3 formalde 99.7 1.7E-15 3.6E-20 123.4 14.7 171 5-186 95-276 (345)
62 cd05279 Zn_ADH1 Liver alcohol 99.7 1.7E-15 3.7E-20 124.7 14.4 163 5-181 95-288 (365)
63 cd08235 iditol_2_DH_like L-idi 99.7 2.3E-15 4.9E-20 122.5 14.8 160 7-182 97-269 (343)
64 cd05285 sorbitol_DH Sorbitol d 99.7 1.2E-15 2.6E-20 124.3 13.2 162 5-182 96-269 (343)
65 cd08290 ETR 2-enoyl thioester 99.7 1.5E-14 3.3E-19 117.6 19.0 115 65-180 128-253 (341)
66 cd08261 Zn_ADH7 Alcohol dehydr 99.7 3E-15 6.6E-20 121.6 14.8 159 6-181 96-261 (337)
67 cd08249 enoyl_reductase_like e 99.7 7E-15 1.5E-19 119.8 16.7 177 1-182 1-258 (339)
68 cd08240 6_hydroxyhexanoate_dh_ 99.7 2.4E-15 5.1E-20 122.9 13.9 163 7-183 110-279 (350)
69 cd08297 CAD3 Cinnamyl alcohol 99.7 4.2E-15 9.2E-20 120.9 15.0 161 7-181 101-268 (341)
70 PRK13771 putative alcohol dehy 99.6 2.6E-15 5.6E-20 121.7 12.9 160 5-182 96-259 (334)
71 cd08238 sorbose_phosphate_red 99.6 3.5E-15 7.6E-20 124.7 13.9 102 77-179 169-289 (410)
72 PF00107 ADH_zinc_N: Zinc-bind 99.6 7.2E-16 1.6E-20 108.8 7.6 92 95-188 1-100 (130)
73 cd08244 MDR_enoyl_red Possible 99.6 7.3E-14 1.6E-18 112.5 20.1 114 65-181 125-244 (324)
74 TIGR00692 tdh L-threonine 3-de 99.6 1.1E-14 2.4E-19 118.5 14.9 160 6-182 98-265 (340)
75 cd08266 Zn_ADH_like1 Alcohol d 99.6 1.3E-14 2.8E-19 117.2 14.7 165 5-182 99-269 (342)
76 cd08264 Zn_ADH_like2 Alcohol d 99.6 5.8E-15 1.3E-19 119.2 12.3 154 5-180 96-255 (325)
77 cd08274 MDR9 Medium chain dehy 99.6 1E-14 2.2E-19 118.9 13.5 147 19-182 125-277 (350)
78 cd08263 Zn_ADH10 Alcohol dehyd 99.6 1.3E-14 2.9E-19 119.3 14.4 143 24-181 139-290 (367)
79 PLN02702 L-idonate 5-dehydroge 99.6 1.3E-14 2.8E-19 119.3 14.3 162 5-182 115-289 (364)
80 cd05288 PGDH Prostaglandin deh 99.6 1.6E-14 3.4E-19 116.8 14.4 116 65-182 127-248 (329)
81 cd05281 TDH Threonine dehydrog 99.6 1.4E-14 3E-19 118.1 14.1 160 5-182 99-266 (341)
82 cd08258 Zn_ADH4 Alcohol dehydr 99.6 1.1E-14 2.4E-19 117.1 13.2 159 7-181 100-267 (306)
83 cd08289 MDR_yhfp_like Yhfp put 99.6 1.7E-14 3.7E-19 116.4 14.2 144 24-181 95-246 (326)
84 cd08254 hydroxyacyl_CoA_DH 6-h 99.6 1.6E-14 3.5E-19 116.9 14.0 162 6-182 99-267 (338)
85 cd05280 MDR_yhdh_yhfp Yhdh and 99.6 1.3E-13 2.9E-18 111.0 19.2 114 65-181 125-246 (325)
86 cd05188 MDR Medium chain reduc 99.6 2.1E-14 4.5E-19 112.4 13.8 156 12-182 74-236 (271)
87 cd08276 MDR7 Medium chain dehy 99.6 2.8E-14 6.1E-19 115.2 14.8 163 6-182 94-263 (336)
88 cd08236 sugar_DH NAD(P)-depend 99.6 2.6E-14 5.7E-19 116.3 14.5 158 9-183 98-263 (343)
89 cd05283 CAD1 Cinnamyl alcohol 99.6 1.9E-14 4.2E-19 117.1 13.5 162 5-186 96-271 (337)
90 cd08252 AL_MDR Arginate lyase 99.6 2.6E-13 5.5E-18 110.0 19.7 113 65-180 126-250 (336)
91 cd05278 FDH_like Formaldehyde 99.6 2.4E-14 5.3E-19 116.5 13.8 161 6-182 97-271 (347)
92 cd08251 polyketide_synthase po 99.6 4E-13 8.7E-18 106.7 20.3 113 65-180 103-221 (303)
93 cd08282 PFDH_like Pseudomonas 99.6 4.2E-14 9.2E-19 116.8 15.1 146 23-181 123-288 (375)
94 cd05286 QOR2 Quinone oxidoredu 99.6 3.2E-13 7E-18 107.7 19.6 115 65-181 118-238 (320)
95 TIGR01202 bchC 2-desacetyl-2-h 99.6 6.9E-14 1.5E-18 112.7 15.8 107 65-188 128-241 (308)
96 cd08253 zeta_crystallin Zeta-c 99.6 4.7E-13 1E-17 107.1 20.5 115 65-181 126-246 (325)
97 cd08283 FDH_like_1 Glutathione 99.6 3.5E-14 7.5E-19 117.8 14.3 144 24-182 135-310 (386)
98 TIGR02823 oxido_YhdH putative 99.6 2.5E-13 5.5E-18 109.5 18.7 113 65-181 124-244 (323)
99 cd08279 Zn_ADH_class_III Class 99.6 6.4E-14 1.4E-18 115.2 15.3 143 24-181 134-285 (363)
100 cd08269 Zn_ADH9 Alcohol dehydr 99.6 3.2E-13 6.8E-18 108.2 18.6 112 66-181 113-232 (312)
101 cd05276 p53_inducible_oxidored 99.6 5.4E-13 1.2E-17 106.6 19.7 115 65-181 121-241 (323)
102 cd08286 FDH_like_ADH2 formalde 99.6 6.8E-14 1.5E-18 114.0 14.5 146 22-182 114-270 (345)
103 cd08248 RTN4I1 Human Reticulon 99.6 3.5E-13 7.5E-18 109.9 18.4 111 65-180 140-259 (350)
104 cd08259 Zn_ADH5 Alcohol dehydr 99.6 6.1E-14 1.3E-18 113.2 13.5 160 5-181 96-259 (332)
105 cd08234 threonine_DH_like L-th 99.6 1E-13 2.3E-18 112.2 13.8 156 9-181 98-260 (334)
106 cd08242 MDR_like Medium chain 99.6 5.4E-14 1.2E-18 113.4 12.1 155 8-186 92-253 (319)
107 smart00829 PKS_ER Enoylreducta 99.6 1.5E-13 3.3E-18 108.0 14.3 114 65-180 86-207 (288)
108 cd05195 enoyl_red enoyl reduct 99.6 1.7E-13 3.7E-18 107.8 14.5 115 65-181 90-212 (293)
109 cd08271 MDR5 Medium chain dehy 99.5 1.2E-12 2.6E-17 105.1 19.4 113 65-180 123-241 (325)
110 cd08284 FDH_like_2 Glutathione 99.5 1.7E-13 3.6E-18 111.6 14.3 159 6-181 96-269 (344)
111 cd08288 MDR_yhdh Yhdh putative 99.5 1.1E-12 2.5E-17 105.7 18.9 113 65-181 125-245 (324)
112 cd08270 MDR4 Medium chain dehy 99.5 9.5E-13 2.1E-17 105.2 18.1 155 16-181 14-225 (305)
113 TIGR02824 quinone_pig3 putativ 99.5 2E-12 4.3E-17 103.6 19.8 115 65-181 121-241 (325)
114 cd08232 idonate-5-DH L-idonate 99.5 1.6E-13 3.6E-18 111.4 13.0 157 7-181 97-265 (339)
115 cd08298 CAD2 Cinnamyl alcohol 99.5 2.1E-13 4.6E-18 110.3 13.3 152 5-180 101-258 (329)
116 cd08268 MDR2 Medium chain dehy 99.5 2.8E-12 6E-17 102.9 19.4 115 65-181 126-246 (328)
117 cd08272 MDR6 Medium chain dehy 99.5 3E-12 6.4E-17 102.7 19.2 112 65-180 126-243 (326)
118 cd08262 Zn_ADH8 Alcohol dehydr 99.5 3.9E-13 8.5E-18 109.3 14.0 143 23-181 114-267 (341)
119 cd08241 QOR1 Quinone oxidoredu 99.5 4.4E-12 9.5E-17 101.4 19.8 115 65-181 121-241 (323)
120 KOG1202 Animal-type fatty acid 99.5 2.6E-13 5.6E-18 121.0 12.3 115 65-180 1534-1657(2376)
121 cd08245 CAD Cinnamyl alcohol d 99.5 6.8E-13 1.5E-17 107.4 13.8 157 5-180 96-258 (330)
122 cd08273 MDR8 Medium chain dehy 99.5 7.2E-12 1.6E-16 101.2 19.0 112 65-182 121-237 (331)
123 cd05289 MDR_like_2 alcohol deh 99.4 2.4E-11 5.2E-16 96.6 18.6 110 65-181 126-241 (309)
124 cd08275 MDR3 Medium chain dehy 99.4 5.1E-11 1.1E-15 96.2 19.5 114 65-181 120-239 (337)
125 cd08267 MDR1 Medium chain dehy 99.4 3.5E-11 7.6E-16 96.4 18.0 111 65-181 125-243 (319)
126 cd08247 AST1_like AST1 is a cy 99.3 3.3E-11 7.1E-16 98.5 14.1 111 65-178 132-259 (352)
127 cd08255 2-desacetyl-2-hydroxye 99.3 3.7E-11 7.9E-16 94.9 11.4 106 66-182 81-194 (277)
128 PRK09424 pntA NAD(P) transhydr 99.1 1.2E-09 2.6E-14 93.0 11.5 98 81-180 162-287 (509)
129 cd00401 AdoHcyase S-adenosyl-L 98.9 2E-08 4.2E-13 83.7 11.2 107 69-188 186-297 (413)
130 PRK05476 S-adenosyl-L-homocyst 98.4 5.3E-06 1.1E-10 69.5 11.5 107 68-185 195-306 (425)
131 COG4221 Short-chain alcohol de 98.3 4.5E-06 9.7E-11 64.3 7.9 65 83-147 5-73 (246)
132 TIGR00561 pntA NAD(P) transhyd 98.3 9E-06 2E-10 69.5 10.4 96 82-180 162-286 (511)
133 TIGR00936 ahcY adenosylhomocys 98.2 1.9E-05 4.1E-10 65.9 11.3 101 70-181 180-285 (406)
134 PLN02494 adenosylhomocysteinas 98.2 1.8E-05 3.9E-10 66.8 11.1 99 72-181 241-344 (477)
135 COG0300 DltE Short-chain dehyd 98.2 1.8E-05 3.9E-10 62.2 10.0 48 82-129 4-51 (265)
136 COG3967 DltE Short-chain dehyd 98.0 3.4E-05 7.4E-10 58.0 8.3 69 83-151 4-77 (245)
137 KOG1205 Predicted dehydrogenas 98.0 6.2E-05 1.4E-09 59.7 9.5 107 83-189 11-160 (282)
138 PRK08306 dipicolinate synthase 97.9 0.00041 9E-09 55.8 13.5 94 83-184 151-247 (296)
139 PRK08324 short chain dehydroge 97.9 0.00012 2.6E-09 65.3 11.4 48 83-130 421-468 (681)
140 TIGR00518 alaDH alanine dehydr 97.8 0.00017 3.6E-09 59.8 9.8 93 84-180 167-269 (370)
141 PRK05993 short chain dehydroge 97.8 0.00014 3E-09 57.6 8.8 56 83-139 3-59 (277)
142 KOG1014 17 beta-hydroxysteroid 97.8 9.7E-05 2.1E-09 58.8 7.6 68 83-151 48-123 (312)
143 PRK08017 oxidoreductase; Provi 97.8 0.00016 3.4E-09 56.3 8.5 53 85-138 3-56 (256)
144 PRK05693 short chain dehydroge 97.7 0.00027 5.8E-09 55.8 8.6 61 85-146 2-63 (274)
145 PRK06057 short chain dehydroge 97.7 0.00033 7.3E-09 54.6 9.1 57 83-139 6-63 (255)
146 PRK12771 putative glutamate sy 97.7 9.8E-05 2.1E-09 64.5 6.5 69 67-137 106-209 (564)
147 PRK05872 short chain dehydroge 97.7 0.00037 8.1E-09 55.8 9.0 47 83-129 8-54 (296)
148 PRK06182 short chain dehydroge 97.6 0.00042 9.1E-09 54.6 8.8 64 83-147 2-66 (273)
149 PF02353 CMAS: Mycolic acid cy 97.6 0.00021 4.5E-09 56.8 7.0 99 75-175 54-162 (273)
150 PRK07825 short chain dehydroge 97.6 0.00045 9.8E-09 54.4 8.6 57 83-139 4-62 (273)
151 PRK06200 2,3-dihydroxy-2,3-dih 97.6 0.00049 1.1E-08 53.9 8.5 47 83-129 5-51 (263)
152 PRK08261 fabG 3-ketoacyl-(acyl 97.6 0.00015 3.3E-09 61.4 5.8 94 78-182 28-127 (450)
153 PRK11873 arsM arsenite S-adeno 97.6 0.0015 3.2E-08 51.7 11.0 95 79-179 73-184 (272)
154 PRK07060 short chain dehydroge 97.5 0.00064 1.4E-08 52.4 8.7 57 83-139 8-65 (245)
155 TIGR03325 BphB_TodD cis-2,3-di 97.5 0.00065 1.4E-08 53.2 8.8 47 83-129 4-50 (262)
156 cd05213 NAD_bind_Glutamyl_tRNA 97.5 0.00034 7.4E-09 56.6 7.2 108 65-180 156-273 (311)
157 PRK12742 oxidoreductase; Provi 97.5 0.00059 1.3E-08 52.4 8.3 65 83-147 5-71 (237)
158 TIGR02853 spore_dpaA dipicolin 97.5 0.0025 5.5E-08 51.0 12.1 46 83-130 150-195 (287)
159 PRK07576 short chain dehydroge 97.5 0.00042 9.1E-09 54.5 7.5 42 83-124 8-49 (264)
160 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.00033 7.2E-09 53.8 6.8 43 83-125 4-46 (238)
161 PRK12829 short chain dehydroge 97.5 0.00084 1.8E-08 52.4 9.0 45 81-125 8-52 (264)
162 PRK08265 short chain dehydroge 97.5 0.00076 1.7E-08 52.9 8.8 48 83-130 5-52 (261)
163 PF01488 Shikimate_DH: Shikima 97.5 0.00062 1.3E-08 48.3 7.4 47 83-130 11-58 (135)
164 PRK00377 cbiT cobalt-precorrin 97.5 0.0023 4.9E-08 48.3 10.7 96 77-177 34-143 (198)
165 PF13460 NAD_binding_10: NADH( 97.5 0.0025 5.4E-08 47.0 10.7 90 87-181 1-100 (183)
166 PRK07063 short chain dehydroge 97.4 0.00069 1.5E-08 52.9 7.8 45 83-127 6-50 (260)
167 COG2230 Cfa Cyclopropane fatty 97.4 0.0023 4.9E-08 50.9 10.6 104 67-175 56-172 (283)
168 PRK06139 short chain dehydroge 97.4 0.00081 1.8E-08 54.9 8.4 43 83-125 6-48 (330)
169 PRK11705 cyclopropane fatty ac 97.4 0.002 4.3E-08 53.7 10.7 105 67-177 151-265 (383)
170 PLN02780 ketoreductase/ oxidor 97.4 0.00041 8.8E-09 56.4 6.5 45 83-127 52-96 (320)
171 PTZ00075 Adenosylhomocysteinas 97.4 0.00071 1.5E-08 57.4 7.9 89 82-181 252-344 (476)
172 PRK00045 hemA glutamyl-tRNA re 97.4 0.00067 1.4E-08 57.3 7.6 66 65-131 160-229 (423)
173 PRK08339 short chain dehydroge 97.4 0.00058 1.3E-08 53.7 6.8 45 83-127 7-51 (263)
174 PRK06949 short chain dehydroge 97.4 0.00061 1.3E-08 53.0 6.9 44 82-125 7-50 (258)
175 PRK06101 short chain dehydroge 97.4 0.0011 2.4E-08 51.2 8.3 63 85-148 2-67 (240)
176 PRK08261 fabG 3-ketoacyl-(acyl 97.4 0.0037 8.1E-08 53.0 12.1 57 83-139 209-268 (450)
177 PRK07890 short chain dehydroge 97.4 0.00085 1.9E-08 52.2 7.6 43 83-125 4-46 (258)
178 PRK06500 short chain dehydroge 97.4 0.0013 2.8E-08 50.8 8.5 49 83-131 5-53 (249)
179 PRK09186 flagellin modificatio 97.4 0.0014 2.9E-08 51.0 8.4 46 83-128 3-48 (256)
180 PRK06180 short chain dehydroge 97.3 0.0015 3.3E-08 51.6 8.8 43 83-125 3-45 (277)
181 PRK07814 short chain dehydroge 97.3 0.00076 1.7E-08 52.9 6.8 43 83-125 9-51 (263)
182 PRK05866 short chain dehydroge 97.3 0.00079 1.7E-08 53.9 7.0 43 83-125 39-81 (293)
183 PRK05717 oxidoreductase; Valid 97.3 0.0017 3.7E-08 50.6 8.7 47 83-129 9-55 (255)
184 PRK05884 short chain dehydroge 97.3 0.0015 3.2E-08 50.2 8.1 54 86-139 2-56 (223)
185 TIGR01035 hemA glutamyl-tRNA r 97.3 0.00034 7.4E-09 58.9 4.8 101 10-131 123-227 (417)
186 PRK07067 sorbitol dehydrogenas 97.3 0.0018 4E-08 50.4 8.6 47 83-129 5-51 (257)
187 PRK06841 short chain dehydroge 97.3 0.0017 3.7E-08 50.5 8.4 43 83-125 14-56 (255)
188 PRK07478 short chain dehydroge 97.3 0.0009 2E-08 52.1 6.8 43 83-125 5-47 (254)
189 PRK07231 fabG 3-ketoacyl-(acyl 97.3 0.00091 2E-08 51.7 6.7 46 83-128 4-49 (251)
190 PRK05867 short chain dehydroge 97.3 0.00092 2E-08 52.0 6.8 45 83-127 8-52 (253)
191 PRK07062 short chain dehydroge 97.3 0.00092 2E-08 52.4 6.8 43 83-125 7-49 (265)
192 PRK05854 short chain dehydroge 97.3 0.00092 2E-08 54.0 6.9 43 83-125 13-55 (313)
193 cd01078 NAD_bind_H4MPT_DH NADP 97.3 0.0022 4.8E-08 48.2 8.5 46 83-128 27-72 (194)
194 PRK07024 short chain dehydroge 97.3 0.0022 4.7E-08 50.1 8.8 45 84-128 2-46 (257)
195 PF00670 AdoHcyase_NAD: S-aden 97.3 0.0025 5.4E-08 46.5 8.3 103 72-186 10-118 (162)
196 PRK08217 fabG 3-ketoacyl-(acyl 97.3 0.001 2.2E-08 51.4 6.9 43 83-125 4-46 (253)
197 PRK07831 short chain dehydroge 97.3 0.001 2.2E-08 52.1 6.8 45 81-125 14-59 (262)
198 PRK08177 short chain dehydroge 97.3 0.0014 3.1E-08 50.0 7.6 43 85-128 2-44 (225)
199 PRK08267 short chain dehydroge 97.3 0.0017 3.7E-08 50.7 8.1 44 85-128 2-45 (260)
200 PRK09291 short chain dehydroge 97.3 0.001 2.2E-08 51.7 6.8 42 84-125 2-43 (257)
201 PRK07035 short chain dehydroge 97.3 0.0011 2.4E-08 51.4 6.9 43 83-125 7-49 (252)
202 PRK08703 short chain dehydroge 97.2 0.0011 2.3E-08 51.1 6.7 43 83-125 5-47 (239)
203 PRK07523 gluconate 5-dehydroge 97.2 0.0012 2.6E-08 51.4 6.9 43 83-125 9-51 (255)
204 PRK12828 short chain dehydroge 97.2 0.0011 2.3E-08 50.8 6.5 40 83-122 6-45 (239)
205 PRK07109 short chain dehydroge 97.2 0.0013 2.7E-08 53.8 7.0 43 83-125 7-49 (334)
206 PRK06484 short chain dehydroge 97.2 0.0022 4.7E-08 55.3 8.8 64 83-146 4-70 (520)
207 PRK06194 hypothetical protein; 97.2 0.0013 2.8E-08 52.2 6.8 43 83-125 5-47 (287)
208 PRK06196 oxidoreductase; Provi 97.2 0.0013 2.8E-08 53.1 6.9 46 83-128 25-70 (315)
209 PRK06953 short chain dehydroge 97.2 0.0027 6E-08 48.4 8.4 54 85-139 2-56 (222)
210 PRK09072 short chain dehydroge 97.2 0.0013 2.9E-08 51.4 6.7 45 83-127 4-48 (263)
211 PRK06484 short chain dehydroge 97.2 0.0024 5.3E-08 55.0 8.9 57 83-139 268-327 (520)
212 PRK05876 short chain dehydroge 97.2 0.0014 3E-08 51.9 6.8 43 83-125 5-47 (275)
213 PRK07326 short chain dehydroge 97.2 0.0014 3.1E-08 50.3 6.7 46 83-128 5-50 (237)
214 PRK08945 putative oxoacyl-(acy 97.2 0.0014 3.1E-08 50.7 6.8 45 81-125 9-53 (247)
215 PRK07453 protochlorophyllide o 97.2 0.0014 3.1E-08 53.0 7.0 46 83-128 5-50 (322)
216 PRK06172 short chain dehydroge 97.2 0.0015 3.3E-08 50.7 6.8 43 83-125 6-48 (253)
217 PLN02253 xanthoxin dehydrogena 97.2 0.0032 6.8E-08 49.8 8.7 46 83-128 17-62 (280)
218 PRK06483 dihydromonapterin red 97.2 0.0027 5.9E-08 48.8 8.1 46 84-130 2-48 (236)
219 PRK07677 short chain dehydroge 97.2 0.0014 3.1E-08 50.9 6.6 42 84-125 1-42 (252)
220 PRK05653 fabG 3-ketoacyl-(acyl 97.1 0.0036 7.8E-08 48.0 8.7 43 83-125 4-46 (246)
221 PRK08213 gluconate 5-dehydroge 97.1 0.0016 3.4E-08 50.8 6.7 43 83-125 11-53 (259)
222 PRK10538 malonic semialdehyde 97.1 0.0032 6.9E-08 48.9 8.4 45 86-130 2-46 (248)
223 PLN03209 translocon at the inn 97.1 0.0014 3.1E-08 56.9 6.9 48 78-125 74-121 (576)
224 PRK06125 short chain dehydroge 97.1 0.0017 3.7E-08 50.7 6.9 43 83-125 6-48 (259)
225 PRK07904 short chain dehydroge 97.1 0.0015 3.3E-08 51.0 6.5 44 81-124 5-50 (253)
226 PRK06197 short chain dehydroge 97.1 0.0016 3.5E-08 52.3 6.7 42 83-124 15-56 (306)
227 PRK08085 gluconate 5-dehydroge 97.1 0.0017 3.8E-08 50.4 6.8 43 83-125 8-50 (254)
228 PRK13394 3-hydroxybutyrate deh 97.1 0.0018 3.8E-08 50.5 6.8 43 83-125 6-48 (262)
229 PRK12939 short chain dehydroge 97.1 0.002 4.3E-08 49.8 6.9 43 83-125 6-48 (250)
230 PRK06124 gluconate 5-dehydroge 97.1 0.0021 4.5E-08 50.0 6.9 43 83-125 10-52 (256)
231 PRK06482 short chain dehydroge 97.1 0.0043 9.3E-08 48.9 8.7 45 85-129 3-47 (276)
232 PRK06198 short chain dehydroge 97.1 0.0031 6.6E-08 49.1 7.8 40 83-122 5-45 (260)
233 PRK09242 tropinone reductase; 97.1 0.0022 4.7E-08 50.0 6.9 43 83-125 8-50 (257)
234 PRK06181 short chain dehydroge 97.1 0.0021 4.5E-08 50.2 6.7 42 84-125 1-42 (263)
235 PRK12823 benD 1,6-dihydroxycyc 97.1 0.0047 1E-07 48.1 8.7 37 83-119 7-43 (260)
236 PRK08643 acetoin reductase; Va 97.1 0.0021 4.5E-08 50.0 6.7 42 84-125 2-43 (256)
237 KOG1209 1-Acyl dihydroxyaceton 97.1 0.0055 1.2E-07 46.7 8.5 108 83-190 6-150 (289)
238 PF12847 Methyltransf_18: Meth 97.0 0.0012 2.6E-08 44.7 4.6 44 83-128 1-45 (112)
239 TIGR00438 rrmJ cell division p 97.0 0.0095 2.1E-07 44.5 9.9 92 79-177 28-144 (188)
240 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.0072 1.6E-07 45.8 9.2 48 82-130 26-73 (200)
241 TIGR01832 kduD 2-deoxy-D-gluco 97.0 0.0046 1E-07 47.8 8.4 36 83-118 4-39 (248)
242 COG4122 Predicted O-methyltran 97.0 0.014 3.1E-07 44.8 10.7 99 77-178 53-165 (219)
243 PRK05875 short chain dehydroge 97.0 0.0024 5.3E-08 50.2 6.8 43 83-125 6-48 (276)
244 PRK12429 3-hydroxybutyrate deh 97.0 0.0024 5.3E-08 49.5 6.7 43 83-125 3-45 (258)
245 PRK07454 short chain dehydroge 97.0 0.003 6.5E-08 48.7 7.1 44 82-125 4-47 (241)
246 PRK08277 D-mannonate oxidoredu 97.0 0.0026 5.6E-08 50.2 6.9 43 83-125 9-51 (278)
247 PRK08251 short chain dehydroge 97.0 0.0027 5.9E-08 49.1 6.8 42 84-125 2-43 (248)
248 PRK12826 3-ketoacyl-(acyl-carr 97.0 0.0026 5.5E-08 49.1 6.6 42 83-124 5-46 (251)
249 PF00106 adh_short: short chai 97.0 0.0032 6.9E-08 45.6 6.7 40 85-124 1-43 (167)
250 TIGR01963 PHB_DH 3-hydroxybuty 97.0 0.0024 5.2E-08 49.4 6.4 42 84-125 1-42 (255)
251 PRK07774 short chain dehydroge 97.0 0.003 6.4E-08 48.9 6.9 43 83-125 5-47 (250)
252 PRK08589 short chain dehydroge 97.0 0.0028 6.1E-08 50.0 6.8 41 83-124 5-45 (272)
253 PRK06138 short chain dehydroge 97.0 0.0028 6E-08 49.1 6.6 43 83-125 4-46 (252)
254 PRK07666 fabG 3-ketoacyl-(acyl 97.0 0.0032 7E-08 48.4 6.9 42 83-124 6-47 (239)
255 COG2242 CobL Precorrin-6B meth 97.0 0.012 2.6E-07 43.8 9.5 94 78-177 29-133 (187)
256 PRK06914 short chain dehydroge 97.0 0.003 6.4E-08 49.9 6.8 43 83-125 2-44 (280)
257 PRK12384 sorbitol-6-phosphate 96.9 0.0031 6.8E-08 49.1 6.8 42 84-125 2-43 (259)
258 COG2518 Pcm Protein-L-isoaspar 96.9 0.0044 9.6E-08 47.0 7.1 94 77-178 66-170 (209)
259 PRK08862 short chain dehydroge 96.9 0.0031 6.7E-08 48.6 6.6 43 83-125 4-46 (227)
260 PRK08628 short chain dehydroge 96.9 0.0025 5.3E-08 49.7 6.1 43 83-125 6-48 (258)
261 PRK07102 short chain dehydroge 96.9 0.0032 6.9E-08 48.6 6.6 41 85-125 2-42 (243)
262 PRK07832 short chain dehydroge 96.9 0.0032 7E-08 49.6 6.7 40 86-125 2-41 (272)
263 PRK12481 2-deoxy-D-gluconate 3 96.9 0.0072 1.6E-07 47.1 8.4 36 83-118 7-42 (251)
264 PRK08340 glucose-1-dehydrogena 96.9 0.0033 7.1E-08 49.1 6.5 40 86-125 2-41 (259)
265 PRK08263 short chain dehydroge 96.9 0.0079 1.7E-07 47.4 8.7 45 84-128 3-47 (275)
266 CHL00194 ycf39 Ycf39; Provisio 96.9 0.0041 8.9E-08 50.3 7.1 46 86-132 2-47 (317)
267 PRK06924 short chain dehydroge 96.9 0.0065 1.4E-07 47.0 8.0 41 85-125 2-43 (251)
268 PRK06603 enoyl-(acyl carrier p 96.9 0.0075 1.6E-07 47.3 8.4 36 83-118 7-44 (260)
269 PRK08264 short chain dehydroge 96.9 0.0025 5.5E-08 48.9 5.7 40 83-122 5-45 (238)
270 TIGR03206 benzo_BadH 2-hydroxy 96.9 0.004 8.8E-08 48.1 6.7 43 83-125 2-44 (250)
271 TIGR02469 CbiT precorrin-6Y C5 96.9 0.021 4.6E-07 39.0 9.8 95 77-178 13-121 (124)
272 PRK08226 short chain dehydroge 96.8 0.0038 8.2E-08 48.7 6.6 42 83-124 5-46 (263)
273 PRK12936 3-ketoacyl-(acyl-carr 96.8 0.0093 2E-07 45.8 8.6 47 83-129 5-51 (245)
274 PRK06114 short chain dehydroge 96.8 0.0076 1.7E-07 46.9 8.2 37 83-119 7-43 (254)
275 PRK08415 enoyl-(acyl carrier p 96.8 0.0072 1.6E-07 47.9 8.1 57 83-139 4-67 (274)
276 PRK06935 2-deoxy-D-gluconate 3 96.8 0.0037 8.1E-08 48.7 6.4 35 83-117 14-48 (258)
277 PRK07074 short chain dehydroge 96.8 0.0046 9.9E-08 48.1 6.8 45 84-128 2-46 (257)
278 PRK06079 enoyl-(acyl carrier p 96.8 0.0072 1.6E-07 47.1 7.8 43 83-125 6-50 (252)
279 KOG0725 Reductases with broad 96.8 0.0047 1E-07 49.0 6.6 45 83-127 7-51 (270)
280 PF01262 AlaDh_PNT_C: Alanine 96.8 0.0055 1.2E-07 45.0 6.6 48 84-133 20-67 (168)
281 PRK06720 hypothetical protein; 96.8 0.0065 1.4E-07 44.8 6.9 42 83-124 15-56 (169)
282 PRK06113 7-alpha-hydroxysteroi 96.8 0.0054 1.2E-07 47.7 6.8 43 83-125 10-52 (255)
283 PRK13943 protein-L-isoaspartat 96.8 0.026 5.5E-07 46.0 10.8 95 77-177 74-178 (322)
284 KOG1201 Hydroxysteroid 17-beta 96.7 0.0058 1.3E-07 48.7 6.7 61 82-143 36-102 (300)
285 TIGR01289 LPOR light-dependent 96.7 0.0056 1.2E-07 49.5 6.9 46 84-129 3-49 (314)
286 PF02826 2-Hacid_dh_C: D-isome 96.7 0.0068 1.5E-07 45.0 6.8 40 82-122 34-73 (178)
287 KOG1208 Dehydrogenases with di 96.7 0.0052 1.1E-07 49.8 6.5 47 83-129 34-80 (314)
288 PRK06463 fabG 3-ketoacyl-(acyl 96.7 0.011 2.4E-07 45.9 8.3 56 83-139 6-63 (255)
289 PRK07097 gluconate 5-dehydroge 96.7 0.006 1.3E-07 47.8 6.8 43 83-125 9-51 (265)
290 PRK07856 short chain dehydroge 96.7 0.004 8.7E-08 48.4 5.7 38 83-120 5-42 (252)
291 PRK07806 short chain dehydroge 96.7 0.0055 1.2E-07 47.4 6.4 36 83-118 5-40 (248)
292 PRK08303 short chain dehydroge 96.7 0.0051 1.1E-07 49.6 6.4 35 83-117 7-41 (305)
293 PRK08159 enoyl-(acyl carrier p 96.7 0.01 2.2E-07 46.9 8.0 49 82-130 8-61 (272)
294 PRK07424 bifunctional sterol d 96.7 0.0054 1.2E-07 51.5 6.6 41 83-123 177-217 (406)
295 PRK04148 hypothetical protein; 96.7 0.0097 2.1E-07 42.1 6.9 51 82-135 15-65 (134)
296 PRK03369 murD UDP-N-acetylmura 96.7 0.0064 1.4E-07 52.3 7.2 49 80-130 8-56 (488)
297 PRK06523 short chain dehydroge 96.7 0.0039 8.5E-08 48.6 5.4 37 83-119 8-44 (260)
298 PRK12550 shikimate 5-dehydroge 96.7 0.013 2.7E-07 46.7 8.2 48 80-128 118-166 (272)
299 PRK07775 short chain dehydroge 96.7 0.007 1.5E-07 47.8 6.8 43 83-125 9-51 (274)
300 COG0686 Ald Alanine dehydrogen 96.6 0.011 2.4E-07 47.5 7.6 89 85-177 169-267 (371)
301 PRK12367 short chain dehydroge 96.6 0.0054 1.2E-07 47.9 5.9 36 83-118 13-48 (245)
302 PRK06179 short chain dehydroge 96.6 0.0045 9.8E-08 48.6 5.5 40 83-122 3-42 (270)
303 PRK12549 shikimate 5-dehydroge 96.6 0.012 2.6E-07 47.1 7.9 45 83-128 126-171 (284)
304 PRK07533 enoyl-(acyl carrier p 96.6 0.0063 1.4E-07 47.6 6.3 38 83-120 9-48 (258)
305 PRK06398 aldose dehydrogenase; 96.6 0.0041 8.9E-08 48.7 5.2 37 83-119 5-41 (258)
306 PRK07791 short chain dehydroge 96.6 0.0079 1.7E-07 47.9 6.9 37 82-118 4-40 (286)
307 PRK05650 short chain dehydroge 96.6 0.0071 1.5E-07 47.5 6.5 40 86-125 2-41 (270)
308 PRK06505 enoyl-(acyl carrier p 96.6 0.0069 1.5E-07 47.9 6.2 37 83-119 6-44 (271)
309 PRK00258 aroE shikimate 5-dehy 96.6 0.018 4E-07 45.8 8.7 47 82-129 121-168 (278)
310 PRK05565 fabG 3-ketoacyl-(acyl 96.6 0.0081 1.8E-07 46.2 6.5 42 84-125 5-47 (247)
311 PRK07069 short chain dehydroge 96.6 0.012 2.7E-07 45.3 7.5 39 87-125 2-41 (251)
312 PRK08416 7-alpha-hydroxysteroi 96.6 0.0087 1.9E-07 46.8 6.7 41 83-123 7-48 (260)
313 KOG1502 Flavonol reductase/cin 96.5 0.0062 1.3E-07 49.3 5.8 46 83-129 5-53 (327)
314 PRK08063 enoyl-(acyl carrier p 96.5 0.0082 1.8E-07 46.4 6.4 42 83-124 3-45 (250)
315 KOG4169 15-hydroxyprostaglandi 96.5 0.016 3.5E-07 44.6 7.7 46 84-130 5-50 (261)
316 PLN00141 Tic62-NAD(P)-related 96.5 0.0079 1.7E-07 46.9 6.3 42 83-124 16-57 (251)
317 TIGR02415 23BDH acetoin reduct 96.5 0.0095 2.1E-07 46.1 6.6 41 85-125 1-41 (254)
318 PRK07889 enoyl-(acyl carrier p 96.5 0.017 3.8E-07 45.1 8.1 47 83-129 6-56 (256)
319 PRK05599 hypothetical protein; 96.5 0.0086 1.9E-07 46.5 6.3 39 86-125 2-40 (246)
320 KOG1207 Diacetyl reductase/L-x 96.5 0.01 2.3E-07 43.8 6.2 43 83-125 6-48 (245)
321 PLN02583 cinnamoyl-CoA reducta 96.5 0.0087 1.9E-07 47.9 6.4 36 83-118 5-40 (297)
322 PLN02686 cinnamoyl-CoA reducta 96.5 0.0099 2.2E-07 49.2 6.8 44 82-125 51-94 (367)
323 COG0169 AroE Shikimate 5-dehyd 96.5 0.018 3.8E-07 46.0 7.9 46 83-129 125-171 (283)
324 PRK09135 pteridine reductase; 96.5 0.011 2.3E-07 45.6 6.6 41 83-123 5-46 (249)
325 PF05368 NmrA: NmrA-like famil 96.5 0.01 2.2E-07 45.6 6.5 82 87-173 1-94 (233)
326 PLN02986 cinnamyl-alcohol dehy 96.5 0.0074 1.6E-07 48.7 5.9 40 83-122 4-43 (322)
327 KOG1210 Predicted 3-ketosphing 96.4 0.016 3.5E-07 46.5 7.4 50 81-130 30-79 (331)
328 TIGR01809 Shik-DH-AROM shikima 96.4 0.011 2.4E-07 47.2 6.6 46 83-129 124-170 (282)
329 PLN02896 cinnamyl-alcohol dehy 96.4 0.011 2.3E-07 48.5 6.7 44 82-125 8-51 (353)
330 PRK13942 protein-L-isoaspartat 96.4 0.015 3.2E-07 44.5 7.1 93 77-177 70-174 (212)
331 PRK12747 short chain dehydroge 96.4 0.012 2.6E-07 45.6 6.7 41 83-123 3-44 (252)
332 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.046 1E-06 40.3 9.3 66 68-137 28-95 (168)
333 PLN02730 enoyl-[acyl-carrier-p 96.4 0.0074 1.6E-07 48.7 5.5 41 83-124 8-50 (303)
334 PLN02476 O-methyltransferase 96.4 0.055 1.2E-06 43.1 10.3 98 77-177 112-226 (278)
335 PRK08642 fabG 3-ketoacyl-(acyl 96.4 0.028 6E-07 43.4 8.6 47 83-129 4-51 (253)
336 PRK12743 oxidoreductase; Provi 96.4 0.013 2.7E-07 45.7 6.6 40 84-123 2-42 (256)
337 TIGR02632 RhaD_aldol-ADH rhamn 96.4 0.011 2.4E-07 52.9 6.9 43 83-125 413-455 (676)
338 PRK12938 acetyacetyl-CoA reduc 96.4 0.015 3.3E-07 44.8 6.9 33 83-115 2-34 (246)
339 PRK07201 short chain dehydroge 96.4 0.011 2.5E-07 52.3 7.0 42 84-125 371-412 (657)
340 KOG1252 Cystathionine beta-syn 96.3 0.051 1.1E-06 44.1 9.8 58 77-135 96-156 (362)
341 PRK08936 glucose-1-dehydrogena 96.3 0.015 3.3E-07 45.4 6.8 36 83-118 6-41 (261)
342 PRK07577 short chain dehydroge 96.3 0.0076 1.6E-07 46.1 5.0 38 83-120 2-39 (234)
343 PRK14027 quinate/shikimate deh 96.3 0.024 5.1E-07 45.4 7.8 46 82-128 125-171 (283)
344 PRK06171 sorbitol-6-phosphate 96.3 0.0078 1.7E-07 47.1 5.0 38 83-120 8-45 (266)
345 PRK12746 short chain dehydroge 96.3 0.015 3.2E-07 45.1 6.5 42 83-124 5-47 (254)
346 PRK05557 fabG 3-ketoacyl-(acyl 96.3 0.012 2.7E-07 45.1 6.0 37 83-119 4-40 (248)
347 TIGR00406 prmA ribosomal prote 96.3 0.012 2.6E-07 47.2 6.0 92 81-180 157-261 (288)
348 TIGR01500 sepiapter_red sepiap 96.3 0.013 2.9E-07 45.6 6.2 43 86-128 2-48 (256)
349 COG2519 GCD14 tRNA(1-methylade 96.3 0.078 1.7E-06 41.4 10.1 99 77-178 88-194 (256)
350 TIGR01829 AcAcCoA_reduct aceto 96.3 0.016 3.5E-07 44.4 6.5 39 85-123 1-40 (242)
351 PRK04457 spermidine synthase; 96.3 0.1 2.2E-06 41.2 11.2 93 82-177 65-175 (262)
352 PRK06997 enoyl-(acyl carrier p 96.3 0.025 5.5E-07 44.3 7.7 64 83-146 5-75 (260)
353 PLN02989 cinnamyl-alcohol dehy 96.3 0.011 2.3E-07 47.8 5.7 40 83-122 4-43 (325)
354 PRK12548 shikimate 5-dehydroge 96.2 0.027 5.8E-07 45.2 7.8 45 83-128 125-173 (289)
355 PRK07578 short chain dehydroge 96.2 0.033 7.1E-07 41.6 7.9 32 86-118 2-33 (199)
356 PRK08278 short chain dehydroge 96.2 0.0098 2.1E-07 47.0 5.2 37 83-119 5-41 (273)
357 PRK13944 protein-L-isoaspartat 96.2 0.045 9.7E-07 41.5 8.6 96 77-177 66-171 (205)
358 PRK15181 Vi polysaccharide bio 96.2 0.0096 2.1E-07 48.8 5.2 49 70-119 2-50 (348)
359 TIGR02622 CDP_4_6_dhtase CDP-g 96.2 0.011 2.3E-07 48.4 5.5 39 83-121 3-41 (349)
360 PRK05855 short chain dehydroge 96.2 0.017 3.6E-07 50.2 6.9 43 83-125 314-356 (582)
361 PRK13940 glutamyl-tRNA reducta 96.2 0.04 8.6E-07 46.5 8.7 47 82-129 179-226 (414)
362 PF02719 Polysacc_synt_2: Poly 96.1 0.015 3.2E-07 46.6 5.8 42 87-128 1-43 (293)
363 PRK08690 enoyl-(acyl carrier p 96.1 0.017 3.7E-07 45.3 6.2 36 83-118 5-42 (261)
364 COG1748 LYS9 Saccharopine dehy 96.1 0.033 7.2E-07 46.4 8.1 42 85-128 2-44 (389)
365 PRK14982 acyl-ACP reductase; P 96.1 0.019 4.1E-07 47.1 6.5 47 83-129 154-202 (340)
366 PRK07023 short chain dehydroge 96.1 0.0099 2.1E-07 45.9 4.7 35 86-120 3-37 (243)
367 TIGR00507 aroE shikimate 5-deh 96.1 0.046 9.9E-07 43.3 8.4 46 82-128 115-160 (270)
368 PRK08594 enoyl-(acyl carrier p 96.1 0.014 3.1E-07 45.7 5.5 46 83-128 6-56 (257)
369 PRK07985 oxidoreductase; Provi 96.1 0.019 4E-07 46.0 6.2 35 83-117 48-82 (294)
370 COG2910 Putative NADH-flavin r 96.1 0.053 1.2E-06 40.4 7.9 39 86-124 2-40 (211)
371 PRK08219 short chain dehydroge 96.1 0.045 9.9E-07 41.4 8.1 41 84-125 3-43 (227)
372 COG0031 CysK Cysteine synthase 96.0 0.12 2.5E-06 41.6 10.4 61 77-139 55-118 (300)
373 KOG1200 Mitochondrial/plastidi 96.0 0.044 9.5E-07 41.3 7.4 47 84-130 14-60 (256)
374 PLN02650 dihydroflavonol-4-red 96.0 0.017 3.8E-07 47.2 6.0 42 83-124 4-45 (351)
375 PLN00015 protochlorophyllide r 96.0 0.031 6.8E-07 45.0 7.3 42 88-129 1-43 (308)
376 PLN02662 cinnamyl-alcohol dehy 96.0 0.015 3.2E-07 46.8 5.4 38 83-120 3-40 (322)
377 PRK06128 oxidoreductase; Provi 96.0 0.017 3.8E-07 46.2 5.8 36 83-118 54-89 (300)
378 TIGR03466 HpnA hopanoid-associ 96.0 0.012 2.6E-07 47.3 4.9 45 86-131 2-46 (328)
379 PLN03075 nicotianamine synthas 96.0 0.12 2.6E-06 41.6 10.3 97 83-183 123-237 (296)
380 PRK08309 short chain dehydroge 96.0 0.16 3.6E-06 37.6 10.4 96 86-182 2-116 (177)
381 PRK12937 short chain dehydroge 96.0 0.022 4.7E-07 43.8 5.9 36 83-118 4-39 (245)
382 PRK00107 gidB 16S rRNA methylt 95.9 0.089 1.9E-06 39.5 9.0 88 81-175 43-141 (187)
383 PRK12825 fabG 3-ketoacyl-(acyl 95.9 0.022 4.8E-07 43.6 5.9 37 83-119 5-41 (249)
384 PRK08993 2-deoxy-D-gluconate 3 95.9 0.025 5.5E-07 44.0 6.3 36 83-118 9-44 (253)
385 cd01065 NAD_bind_Shikimate_DH 95.9 0.063 1.4E-06 38.4 8.0 48 82-130 17-65 (155)
386 PRK07402 precorrin-6B methylas 95.9 0.19 4.2E-06 37.6 10.9 98 77-178 34-141 (196)
387 PRK07792 fabG 3-ketoacyl-(acyl 95.9 0.029 6.3E-07 45.1 6.7 35 83-117 11-45 (306)
388 PRK06940 short chain dehydroge 95.9 0.028 6.1E-07 44.4 6.5 40 84-125 2-41 (275)
389 PRK09134 short chain dehydroge 95.9 0.034 7.5E-07 43.3 6.9 42 83-124 8-50 (258)
390 PRK07984 enoyl-(acyl carrier p 95.9 0.027 6E-07 44.3 6.3 36 83-118 5-42 (262)
391 PLN02657 3,8-divinyl protochlo 95.9 0.019 4.1E-07 48.0 5.5 41 80-120 56-96 (390)
392 PRK06701 short chain dehydroge 95.9 0.027 5.8E-07 45.0 6.2 37 82-118 44-80 (290)
393 PRK12745 3-ketoacyl-(acyl-carr 95.8 0.019 4.1E-07 44.5 5.2 34 85-118 3-36 (256)
394 PRK06550 fabG 3-ketoacyl-(acyl 95.8 0.018 3.8E-07 44.1 4.9 36 83-118 4-39 (235)
395 PRK12935 acetoacetyl-CoA reduc 95.8 0.037 8E-07 42.7 6.7 42 83-124 5-47 (247)
396 PRK08220 2,3-dihydroxybenzoate 95.8 0.022 4.8E-07 44.0 5.5 36 83-118 7-42 (252)
397 PLN02653 GDP-mannose 4,6-dehyd 95.8 0.015 3.3E-07 47.3 4.8 37 83-119 5-41 (340)
398 PRK09730 putative NAD(P)-bindi 95.8 0.029 6.3E-07 43.1 6.1 40 85-124 2-42 (247)
399 TIGR01472 gmd GDP-mannose 4,6- 95.8 0.016 3.4E-07 47.3 4.8 35 85-119 1-35 (343)
400 PRK07370 enoyl-(acyl carrier p 95.8 0.048 1E-06 42.7 7.3 35 83-117 5-41 (258)
401 PRK08317 hypothetical protein; 95.8 0.12 2.5E-06 39.5 9.4 47 77-125 13-61 (241)
402 TIGR00080 pimt protein-L-isoas 95.8 0.06 1.3E-06 41.1 7.7 96 77-178 71-176 (215)
403 PRK12827 short chain dehydroge 95.8 0.033 7.1E-07 42.8 6.3 34 83-116 5-38 (249)
404 PLN02214 cinnamoyl-CoA reducta 95.8 0.026 5.5E-07 46.2 5.9 38 83-120 9-46 (342)
405 PF01596 Methyltransf_3: O-met 95.8 0.029 6.4E-07 42.7 5.8 96 80-178 42-154 (205)
406 COG0334 GdhA Glutamate dehydro 95.7 0.08 1.7E-06 44.2 8.6 37 82-119 205-241 (411)
407 TIGR01318 gltD_gamma_fam gluta 95.7 0.034 7.4E-07 47.6 6.8 52 83-136 140-212 (467)
408 PRK06947 glucose-1-dehydrogena 95.7 0.035 7.7E-07 42.8 6.4 40 85-124 3-43 (248)
409 PRK06123 short chain dehydroge 95.7 0.041 8.9E-07 42.4 6.7 40 84-123 2-42 (248)
410 PRK00517 prmA ribosomal protei 95.7 0.19 4.1E-06 39.3 10.4 43 81-126 117-160 (250)
411 PRK14967 putative methyltransf 95.7 0.24 5.1E-06 38.0 10.8 46 77-125 30-76 (223)
412 TIGR02685 pter_reduc_Leis pter 95.7 0.033 7.1E-07 43.7 6.2 40 85-124 2-42 (267)
413 TIGR03589 PseB UDP-N-acetylglu 95.7 0.034 7.4E-07 45.1 6.4 43 83-125 3-47 (324)
414 TIGR03649 ergot_EASG ergot alk 95.7 0.013 2.9E-07 46.4 3.9 36 86-121 1-36 (285)
415 COG2227 UbiG 2-polyprenyl-3-me 95.7 0.14 2.9E-06 39.8 9.1 92 82-180 58-162 (243)
416 TIGR01214 rmlD dTDP-4-dehydror 95.7 0.049 1.1E-06 43.0 7.1 52 86-137 1-58 (287)
417 PF03807 F420_oxidored: NADP o 95.6 0.079 1.7E-06 34.7 6.9 45 86-131 1-49 (96)
418 PF08659 KR: KR domain; Inter 95.6 0.088 1.9E-06 39.0 7.8 62 86-148 2-74 (181)
419 PF02737 3HCDH_N: 3-hydroxyacy 95.6 0.051 1.1E-06 40.5 6.4 39 86-125 1-39 (180)
420 PRK07041 short chain dehydroge 95.6 0.03 6.6E-07 42.6 5.4 38 88-125 1-38 (230)
421 PLN02589 caffeoyl-CoA O-methyl 95.6 0.25 5.3E-06 38.8 10.4 97 79-178 75-189 (247)
422 PRK12749 quinate/shikimate deh 95.6 0.088 1.9E-06 42.2 8.1 46 83-129 123-172 (288)
423 TIGR01831 fabG_rel 3-oxoacyl-( 95.5 0.037 8E-07 42.4 5.7 38 87-124 1-39 (239)
424 PLN00198 anthocyanidin reducta 95.5 0.031 6.8E-07 45.4 5.5 38 83-120 8-45 (338)
425 COG0702 Predicted nucleoside-d 95.5 0.027 5.8E-07 44.0 5.0 40 86-125 2-41 (275)
426 COG2226 UbiE Methylase involve 95.5 0.14 3.1E-06 39.9 8.7 97 77-180 45-158 (238)
427 PLN02427 UDP-apiose/xylose syn 95.5 0.041 8.8E-07 45.7 6.1 43 83-125 13-56 (386)
428 TIGR01830 3oxo_ACP_reduc 3-oxo 95.4 0.072 1.6E-06 40.6 7.1 32 87-118 1-32 (239)
429 PLN02520 bifunctional 3-dehydr 95.4 0.052 1.1E-06 47.3 6.9 46 83-129 378-423 (529)
430 PRK12824 acetoacetyl-CoA reduc 95.4 0.045 9.8E-07 42.0 5.9 34 85-118 3-36 (245)
431 PRK14192 bifunctional 5,10-met 95.4 0.17 3.7E-06 40.5 9.2 54 82-137 157-210 (283)
432 PRK12744 short chain dehydroge 95.3 0.037 8E-07 43.1 5.2 34 83-116 7-40 (257)
433 PLN00203 glutamyl-tRNA reducta 95.3 0.11 2.5E-06 45.0 8.4 45 84-129 266-311 (519)
434 PLN02781 Probable caffeoyl-CoA 95.3 0.29 6.4E-06 37.9 10.0 98 77-177 62-176 (234)
435 PRK12809 putative oxidoreducta 95.3 0.052 1.1E-06 48.4 6.5 52 83-136 309-381 (639)
436 TIGR01777 yfcH conserved hypot 95.3 0.021 4.5E-07 45.1 3.6 36 87-122 1-36 (292)
437 KOG1610 Corticosteroid 11-beta 95.2 0.76 1.6E-05 37.2 12.2 107 82-188 27-174 (322)
438 COG1028 FabG Dehydrogenases wi 95.2 0.062 1.3E-06 41.5 6.2 38 83-120 4-41 (251)
439 PF02558 ApbA: Ketopantoate re 95.2 0.063 1.4E-06 38.3 5.8 41 87-130 1-41 (151)
440 PF01370 Epimerase: NAD depend 95.2 0.076 1.6E-06 40.4 6.5 39 87-125 1-39 (236)
441 PRK12769 putative oxidoreducta 95.2 0.054 1.2E-06 48.4 6.3 35 83-118 326-360 (654)
442 PLN03013 cysteine synthase 95.2 0.27 5.8E-06 41.7 10.1 58 77-135 167-227 (429)
443 PLN02565 cysteine synthase 95.2 0.32 7E-06 39.6 10.3 57 77-134 59-118 (322)
444 PTZ00098 phosphoethanolamine N 95.1 0.24 5.2E-06 39.1 9.3 50 77-128 46-95 (263)
445 PLN02778 3,5-epimerase/4-reduc 95.1 0.097 2.1E-06 42.0 7.1 54 83-137 8-65 (298)
446 COG1086 Predicted nucleoside-d 95.1 0.067 1.4E-06 46.4 6.3 46 82-128 248-295 (588)
447 PRK06077 fabG 3-ketoacyl-(acyl 95.1 0.065 1.4E-06 41.3 5.9 35 83-117 5-39 (252)
448 PLN02572 UDP-sulfoquinovose sy 95.1 0.043 9.2E-07 46.7 5.2 34 83-116 46-79 (442)
449 PF02254 TrkA_N: TrkA-N domain 95.1 0.14 3E-06 34.8 6.8 46 87-135 1-46 (116)
450 PRK00811 spermidine synthase; 95.0 0.23 5E-06 39.7 9.0 92 82-177 75-189 (283)
451 PTZ00079 NADP-specific glutama 95.0 0.17 3.7E-06 43.0 8.4 34 83-117 236-270 (454)
452 COG0144 Sun tRNA and rRNA cyto 95.0 0.34 7.3E-06 40.1 10.0 56 77-132 150-209 (355)
453 PF08704 GCD14: tRNA methyltra 94.9 0.1 2.2E-06 40.9 6.5 97 77-176 34-143 (247)
454 PRK10258 biotin biosynthesis p 94.9 0.7 1.5E-05 35.9 11.3 91 79-178 38-139 (251)
455 PF02670 DXP_reductoisom: 1-de 94.9 0.28 6.1E-06 34.5 8.0 51 87-137 1-55 (129)
456 PRK09310 aroDE bifunctional 3- 94.9 0.16 3.5E-06 43.7 8.2 45 83-128 331-375 (477)
457 PRK12859 3-ketoacyl-(acyl-carr 94.9 0.18 3.9E-06 39.2 7.9 33 83-115 5-39 (256)
458 PRK10669 putative cation:proto 94.9 0.12 2.5E-06 45.4 7.4 48 85-134 418-465 (558)
459 PRK09987 dTDP-4-dehydrorhamnos 94.9 0.099 2.1E-06 41.9 6.5 31 86-117 2-32 (299)
460 PRK14103 trans-aconitate 2-met 94.8 0.54 1.2E-05 36.8 10.5 90 77-177 23-124 (255)
461 PLN02695 GDP-D-mannose-3',5'-e 94.8 0.061 1.3E-06 44.6 5.3 37 82-118 19-55 (370)
462 PRK12748 3-ketoacyl-(acyl-carr 94.8 0.09 2E-06 40.8 6.0 35 83-117 4-40 (256)
463 PRK11036 putative S-adenosyl-L 94.8 0.36 7.9E-06 37.8 9.4 90 82-176 43-146 (255)
464 PLN02240 UDP-glucose 4-epimera 94.8 0.066 1.4E-06 43.6 5.5 35 83-117 4-38 (352)
465 TIGR00446 nop2p NOL1/NOP2/sun 94.8 1.4 3E-05 34.8 12.8 52 79-132 67-123 (264)
466 PRK01581 speE spermidine synth 94.8 0.59 1.3E-05 38.8 10.7 92 82-177 149-266 (374)
467 PRK14175 bifunctional 5,10-met 94.8 0.33 7.1E-06 38.9 9.0 68 65-136 139-208 (286)
468 PLN02206 UDP-glucuronate decar 94.7 0.067 1.5E-06 45.5 5.5 35 83-117 118-152 (442)
469 PLN02366 spermidine synthase 94.7 0.41 8.9E-06 38.8 9.7 92 82-176 90-203 (308)
470 PRK13656 trans-2-enoyl-CoA red 94.7 0.18 3.8E-06 42.1 7.6 34 82-116 39-74 (398)
471 PF04321 RmlD_sub_bind: RmlD s 94.7 0.089 1.9E-06 42.0 5.7 51 86-137 2-59 (286)
472 PF03435 Saccharop_dh: Sacchar 94.7 0.2 4.2E-06 41.8 8.0 40 87-127 1-42 (386)
473 PRK11908 NAD-dependent epimera 94.7 0.092 2E-06 42.9 5.9 40 85-124 2-42 (347)
474 TIGR01746 Thioester-redct thio 94.6 0.065 1.4E-06 43.5 5.0 34 86-119 1-36 (367)
475 PRK05134 bifunctional 3-demeth 94.6 0.72 1.6E-05 35.4 10.6 95 78-179 43-151 (233)
476 PRK00312 pcm protein-L-isoaspa 94.5 0.29 6.3E-06 37.1 8.0 95 77-178 72-174 (212)
477 PF07991 IlvN: Acetohydroxy ac 94.5 0.49 1.1E-05 34.6 8.5 84 83-177 3-93 (165)
478 PRK08125 bifunctional UDP-gluc 94.4 0.084 1.8E-06 47.2 5.6 40 82-121 313-353 (660)
479 TIGR01138 cysM cysteine syntha 94.4 0.85 1.8E-05 36.6 10.8 57 77-135 52-111 (290)
480 KOG1203 Predicted dehydrogenas 94.4 0.079 1.7E-06 44.4 4.9 44 82-125 77-120 (411)
481 PRK01438 murD UDP-N-acetylmura 94.4 0.18 4E-06 43.2 7.4 35 83-118 15-49 (480)
482 COG1090 Predicted nucleoside-d 94.4 0.066 1.4E-06 42.4 4.2 51 87-137 1-64 (297)
483 PLN02166 dTDP-glucose 4,6-dehy 94.3 0.099 2.1E-06 44.4 5.6 35 83-117 119-153 (436)
484 PRK11761 cysM cysteine synthas 94.3 0.84 1.8E-05 36.7 10.7 58 77-136 56-116 (296)
485 TIGR01470 cysG_Nterm siroheme 94.3 0.16 3.5E-06 38.6 6.1 35 83-118 8-42 (205)
486 COG1064 AdhP Zn-dependent alco 94.3 0.028 6.1E-07 45.9 2.1 79 16-97 16-95 (339)
487 PRK06522 2-dehydropantoate 2-r 94.2 0.17 3.7E-06 40.4 6.5 43 86-130 2-44 (304)
488 PF13561 adh_short_C2: Enoyl-( 94.2 0.19 4.1E-06 38.7 6.6 41 91-131 1-47 (241)
489 PRK11933 yebU rRNA (cytosine-C 94.2 1.8 3.9E-05 37.2 12.9 99 80-181 110-244 (470)
490 PLN02556 cysteine synthase/L-3 94.2 0.6 1.3E-05 38.8 9.8 58 77-135 103-163 (368)
491 smart00822 PKS_KR This enzymat 94.2 0.072 1.6E-06 38.2 4.0 34 86-119 2-36 (180)
492 PRK14904 16S rRNA methyltransf 94.2 0.79 1.7E-05 39.1 10.7 53 78-132 245-302 (445)
493 PRK03562 glutathione-regulated 94.2 0.2 4.4E-06 44.5 7.4 48 84-133 400-447 (621)
494 PRK06035 3-hydroxyacyl-CoA deh 94.2 0.18 3.9E-06 40.4 6.5 40 85-125 4-43 (291)
495 TIGR00417 speE spermidine synt 94.2 0.67 1.4E-05 36.7 9.7 92 83-177 72-184 (270)
496 PLN02928 oxidoreductase family 94.1 0.1 2.2E-06 43.0 5.1 34 83-117 158-191 (347)
497 PLN02970 serine racemase 94.1 1.7 3.6E-05 35.5 12.1 51 85-137 76-129 (328)
498 PRK00141 murD UDP-N-acetylmura 94.1 0.18 3.9E-06 43.3 6.7 47 83-130 14-60 (473)
499 PRK06300 enoyl-(acyl carrier p 94.1 0.15 3.3E-06 41.1 5.9 35 83-117 7-43 (299)
500 PF00070 Pyr_redox: Pyridine n 94.1 0.15 3.3E-06 32.3 4.8 33 86-119 1-33 (80)
No 1
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=1.9e-28 Score=190.11 Aligned_cols=165 Identities=43% Similarity=0.593 Sum_probs=152.7
Q ss_pred hccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCC-------------------------------
Q 029543 16 QNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGV------------------------------- 64 (192)
Q Consensus 16 ~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~------------------------------- 64 (192)
++....++|.+..++||++..|+++||+++.++.+. .+|.+|+.+|..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~-~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~ 105 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA-PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQE 105 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCC-cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecccceE
Confidence 556667788889999999999999999999999987 588888888876
Q ss_pred --------------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 65 --------------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 65 --------------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
..|..|||.+|.+.+++++|++|+|.+|+|++|..+.|+||..|+||+.+..++
T Consensus 106 y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~ 185 (340)
T COG2130 106 YAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGA 185 (340)
T ss_pred EEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCH
Confidence 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 119 EKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 119 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
+|.+++++++|.|.+|||+++ ++.+.+++..++|+ |++|++.++..+..|+..++ +++|..++
T Consensus 186 eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~ 253 (340)
T COG2130 186 EKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQ 253 (340)
T ss_pred HHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhh
Confidence 999999966999999999999 99999999998877 99999999999999999996 48887664
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.95 E-value=1.4e-28 Score=196.58 Aligned_cols=169 Identities=24% Similarity=0.332 Sum_probs=141.8
Q ss_pred ccccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCC-CcccccCCCCCchhHHHHHHHHHHHhCCC
Q 029543 4 SIRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDT-SLFYSFCPGGVIMPSVTAFAGLYEICSPK 82 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~-~~~~~~~~g~~~~~~~ta~~~l~~~~~~~ 82 (192)
.|++|++|+|++.+..|++.+|+|+||++|+..++. .+|+..+ ....|+ .|++.|+|++| +..+++
T Consensus 99 ~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~-------~iP~~~d~~~aApl-----lCaGiT~y~al-k~~~~~ 165 (339)
T COG1064 99 YCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVV-------KIPEGLDLAEAAPL-----LCAGITTYRAL-KKANVK 165 (339)
T ss_pred cccCcccccCCCccccceeecCcceeEEEEchHHeE-------ECCCCCChhhhhhh-----hcCeeeEeeeh-hhcCCC
Confidence 389999999999999999999999999999988876 3333211 122333 78999999999 568999
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc-ccccHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV-DFVGIEY 161 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~-d~~g~~~ 161 (192)
||++|+|+| .|++|.+++|+||++|++|++++++++|++.++ ++|+|+++|.+++ +..+.+++.. +.+ |+++..+
T Consensus 166 pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~-~~~~~~~~~~-d~ii~tv~~~~ 241 (339)
T COG1064 166 PGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-DALEAVKEIA-DAIIDTVGPAT 241 (339)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc-hhhHHhHhhC-cEEEECCChhh
Confidence 999999999 789999999999999999999999999999999 9999999998766 7888887752 333 8999779
Q ss_pred HHHHHHhhcCCC-eEEEeeCC-CC-Cccccc
Q 029543 162 CRSLLLVLLFRP-LKIMENDS-GS-TPIPFA 189 (192)
Q Consensus 162 ~~~~~~~l~~~G-~v~~G~~~-~~-~~~~~~ 189 (192)
++.+++.|+++| ++++|... ++ .++|..
T Consensus 242 ~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~ 272 (339)
T COG1064 242 LEPSLKALRRGGTLVLVGLPGGGPIPLLPAF 272 (339)
T ss_pred HHHHHHHHhcCCEEEEECCCCCcccCCCCHH
Confidence 999999999999 46889884 44 335444
No 3
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.95 E-value=4.3e-26 Score=184.58 Aligned_cols=165 Identities=28% Similarity=0.310 Sum_probs=138.1
Q ss_pred hccccccCCCCCCCeEEEEEEEeeeChhhhhhhccc-------C--------------CCcccccCCCCC----------
Q 029543 16 QNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKL-------D--------------TSLFYSFCPGGV---------- 64 (192)
Q Consensus 16 ~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~-------~--------------~~~~~~~~~g~~---------- 64 (192)
++....+.|.+.++||||+++++++||.+.....+. . ++.+..|.+|+.
T Consensus 15 l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~ 94 (326)
T COG0604 15 LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRD 94 (326)
T ss_pred eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCC
Confidence 677888889999999999999999999665433321 0 111222222221
Q ss_pred -----------------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe
Q 029543 65 -----------------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA 115 (192)
Q Consensus 65 -----------------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 115 (192)
+++++|||+++++..++++|++|||+||+|++|++++|+||++|+++++++
T Consensus 95 G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~ 174 (326)
T COG0604 95 GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVV 174 (326)
T ss_pred CcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEe
Confidence 788999999998888999999999999999999999999999998877777
Q ss_pred CCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 116 GSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 116 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
.++++.++++ ++|+|++|||+++ ++.+++++++++ ++ |++|++++..++++|+++|+ +.+|..++
T Consensus 175 ~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g 245 (326)
T COG0604 175 SSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG 245 (326)
T ss_pred cCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC
Confidence 7888888888 9999999999988 899999999987 66 99999999999999999995 68888774
No 4
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.95 E-value=1.6e-26 Score=175.42 Aligned_cols=176 Identities=24% Similarity=0.308 Sum_probs=147.6
Q ss_pred hhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCC-----------------------------
Q 029543 14 KIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGV----------------------------- 64 (192)
Q Consensus 14 ~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~----------------------------- 64 (192)
...+....+.|.+.+++++||..++++|..+.....+.......|+.+|.+
T Consensus 21 dvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~ 100 (336)
T KOG1197|consen 21 DVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGA 100 (336)
T ss_pred ceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEEeccchh
Confidence 345566678889999999999999999984332222221112233444443
Q ss_pred ---------------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 65 ---------------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 65 ---------------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
...++|||.-+++..++++|++|||+.|+||+|++++|++|+.|+++|+++.+
T Consensus 101 yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asT 180 (336)
T KOG1197|consen 101 YAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATAST 180 (336)
T ss_pred hheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEecc
Confidence 67889999999899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCC-eEEEeeCCCC-Ccccccc
Q 029543 118 KEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRP-LKIMENDSGS-TPIPFAF 190 (192)
Q Consensus 118 ~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G-~v~~G~~~~~-~~~~~~~ 190 (192)
.+|.+.++ +.|+.+.|+++.+ |+.+++++++.+ |+ |.+|.+++...+++||++| .|.+|..++- .|+|+.+
T Consensus 181 aeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ 258 (336)
T KOG1197|consen 181 AEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQ 258 (336)
T ss_pred HHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehhh
Confidence 99999999 9999999999999 999999999977 87 8999999999999999999 5799999886 5677765
Q ss_pred c
Q 029543 191 I 191 (192)
Q Consensus 191 ~ 191 (192)
+
T Consensus 259 l 259 (336)
T KOG1197|consen 259 L 259 (336)
T ss_pred c
Confidence 4
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=9.2e-25 Score=171.14 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=145.1
Q ss_pred ccccchhhhhhhhccccc-cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCC
Q 029543 4 SIRNTSKRLCKIQNILKQ-NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPK 82 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~-~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~ 82 (192)
-|+.|++|+|+.+.+.+- +.+|.+++|++.+..++. .+|+. -++..|...+|+++++||. +++.++
T Consensus 102 ~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~-------KLPd~-----vs~eeGAl~ePLsV~~HAc-r~~~vk 168 (354)
T KOG0024|consen 102 FCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCY-------KLPDN-----VSFEEGALIEPLSVGVHAC-RRAGVK 168 (354)
T ss_pred hhhCcccccCCccccccCCCcCCceEEEEEechHhee-------eCCCC-----Cchhhcccccchhhhhhhh-hhcCcc
Confidence 389999999999998875 568999999999988888 66654 5677888899999999999 789999
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc---ccHHHHHHhhccC---Cc-
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE---PDLDVALKRMFLC---WV- 154 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~---~~~~~~i~~~~~~---g~- 154 (192)
+|++|||+| +||||+++..+||++|| +|++++..+.|++.++ ++|++.+.+.... +++.+.++...++ .+
T Consensus 169 ~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~ 246 (354)
T KOG0024|consen 169 KGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSSHKSSPQELAELVEKALGKKQPDVT 246 (354)
T ss_pred cCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccccHHHHHHHHHhhccccCCCeE
Confidence 999999999 89999999999999999 9999999999999999 8999988776543 1344555544442 22
Q ss_pred -ccccH-HHHHHHHHhhcCCCe-EEEeeCCCCCccccccc
Q 029543 155 -DFVGI-EYCRSLLLVLLFRPL-KIMENDSGSTPIPFAFI 191 (192)
Q Consensus 155 -d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~~~~~~~~~~ 191 (192)
||+|. .+++.++.+++.+|. +++|..+...++|+..+
T Consensus 247 ~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v 286 (354)
T KOG0024|consen 247 FDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDV 286 (354)
T ss_pred EEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhh
Confidence 99995 599999999999995 67888777788887653
No 6
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.91 E-value=4.2e-23 Score=160.07 Aligned_cols=159 Identities=61% Similarity=0.874 Sum_probs=141.8
Q ss_pred CCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCC--------------------------------------
Q 029543 24 AEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGV-------------------------------------- 64 (192)
Q Consensus 24 ~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~-------------------------------------- 64 (192)
......+|+|+..|.++||++|.++.....+ +..++.+|-.
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~ 112 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPN 112 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEecCCCCCCcCceEEEeccceEEEEecCc
Confidence 3455779999999999999999888766544 6666766664
Q ss_pred ----------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 65 ----------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 65 ----------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
.+|.+|||..+++.+.++.|++|+|.||+|.+|+++-|+||.+|++|+.++.|++|.+
T Consensus 113 ~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ 192 (343)
T KOG1196|consen 113 DLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVD 192 (343)
T ss_pred chhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhh
Confidence 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 123 LLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 123 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
.++.++|.|..+||.++.++.+++++..++|+ |.+|+..++..+..|+..|+ +++|..|.
T Consensus 193 ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISq 257 (343)
T KOG1196|consen 193 LLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQ 257 (343)
T ss_pred hhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehh
Confidence 99988999999999988789999998777777 99999999999999999996 58887663
No 7
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.89 E-value=1.4e-21 Score=159.00 Aligned_cols=168 Identities=55% Similarity=0.792 Sum_probs=129.7
Q ss_pred hhhhccccccC----CCCCCCeEEEEEEEeeeChhhhhhhccc----------C-------------CCcccccCCCC--
Q 029543 13 CKIQNILKQNA----AEGSKDTVLLKNLYLSCDPYMQKRMSKL----------D-------------TSLFYSFCPGG-- 63 (192)
Q Consensus 13 C~~~~~~g~~~----~g~~~~~vlv~~~~~~v~p~~~~~~~~~----------~-------------~~~~~~~~~g~-- 63 (192)
|+.+.+...++ |.+.+++|||++.++++||.+.....+. . .+....|..|+
T Consensus 18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V 97 (338)
T cd08295 18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLV 97 (338)
T ss_pred ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEE
Confidence 56666666655 8889999999999999999765432110 0 00000011111
Q ss_pred ----------------------------------CchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC
Q 029543 64 ----------------------------------VIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 109 (192)
Q Consensus 64 ----------------------------------~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga 109 (192)
.+++++|||+++.+..++++|++|+|+||+|++|++++|+||.+|+
T Consensus 98 ~~~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~ 177 (338)
T cd08295 98 WGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC 177 (338)
T ss_pred EecCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC
Confidence 1446689999997778999999999999999999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHh-cCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 110 HVVGSAGSKEKVDLLKNK-FGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 110 ~Vi~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+|+++++++++.++++ + +|+++++|+.+++++.+.+++.++.++ |++|+..+..++++++++|+ +.+|..+
T Consensus 178 ~Vi~~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~ 254 (338)
T cd08295 178 YVVGSAGSDEKVDLLK-NKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMIS 254 (338)
T ss_pred EEEEEeCCHHHHHHHH-HhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccc
Confidence 9999999999999999 6 999999997643277777777664455 99999999999999999995 5777654
No 8
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=1.4e-22 Score=158.68 Aligned_cols=172 Identities=16% Similarity=0.178 Sum_probs=136.0
Q ss_pred ccccchhhhhhh--hccccccC-----CCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHH
Q 029543 4 SIRNTSKRLCKI--QNILKQNA-----AEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGL 75 (192)
Q Consensus 4 ~~~~g~~~~C~~--~~~~g~~~-----~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l 75 (192)
.|+++++++|++ ...-|+.. .|+|++|+++...++. .+|...+. ...|+ .|++.|+|.+|
T Consensus 107 ~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~-------kIP~~~pl~~aAPl-----LCaGITvYspL 174 (360)
T KOG0023|consen 107 YCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAI-------KIPENLPLASAAPL-----LCAGITVYSPL 174 (360)
T ss_pred ccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEE-------ECCCCCChhhccch-----hhcceEEeehh
Confidence 388999999994 44444444 4559999999999888 44433111 22334 89999999999
Q ss_pred HHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCcc
Q 029543 76 YEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWVD 155 (192)
Q Consensus 76 ~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~d 155 (192)
...++.||++|.|.| .|++|.+++|+||++|.+|++++++.++.+.+.+.||+|..++..+++++.+.+.+.+++++|
T Consensus 175 -k~~g~~pG~~vgI~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~ 252 (360)
T KOG0023|consen 175 -KRSGLGPGKWVGIVG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGID 252 (360)
T ss_pred -HHcCCCCCcEEEEec-CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcce
Confidence 667889999999999 666999999999999999999999985555555489999998887444999999988877777
Q ss_pred ccc---HHHHHHHHHhhcCCC-eEEEeeCCCCCccccc
Q 029543 156 FVG---IEYCRSLLLVLLFRP-LKIMENDSGSTPIPFA 189 (192)
Q Consensus 156 ~~g---~~~~~~~~~~l~~~G-~v~~G~~~~~~~~~~~ 189 (192)
++- ...++.++..+|++| +|.+|.+..+..++..
T Consensus 253 ~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~ 290 (360)
T KOG0023|consen 253 TVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTF 290 (360)
T ss_pred eeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccch
Confidence 665 358999999999999 5799998877665544
No 9
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.88 E-value=4e-22 Score=163.13 Aligned_cols=171 Identities=22% Similarity=0.210 Sum_probs=131.8
Q ss_pred ccccchhhhhhhhcccccc-----CCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHH
Q 029543 4 SIRNTSKRLCKIQNILKQN-----AAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEI 78 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~-----~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~ 78 (192)
.|+.|.+|+|++..+.|.. .+|+++||+.++.++... .+|+.. +...+...+|++|+|++....
T Consensus 95 ~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~------~~pd~~-----~~~~aal~epla~~~~~~a~~ 163 (350)
T COG1063 95 YCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLA------KLPDGI-----DEEAAALTEPLATAYHGHAER 163 (350)
T ss_pred hHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCee------cCCCCC-----ChhhhhhcChhhhhhhhhhhc
Confidence 3899999999987666544 689999999999754442 112210 222333367999997774344
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh-cCCCeeeecCCcccHHHHHHhhccC-Cc-
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNK-FGFDDAFNYKEEPDLDVALKRMFLC-WV- 154 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~i~~~~~~-g~- 154 (192)
....++++|+|+| +|+||+++++++|..|+ +|++++++++|+++++ + .|++.+++..++ +....+.+.+.+ |+
T Consensus 164 ~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~-~~~g~~~~~~~~~~-~~~~~~~~~t~g~g~D 240 (350)
T COG1063 164 AAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAK-EAGGADVVVNPSED-DAGAEILELTGGRGAD 240 (350)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HhCCCeEeecCccc-cHHHHHHHHhCCCCCC
Confidence 5556666999999 99999999999999999 8999999999999999 6 777777777665 677778888877 66
Q ss_pred ---ccccH-HHHHHHHHhhcCCCe-EEEeeCCCCC-cccc
Q 029543 155 ---DFVGI-EYCRSLLLVLLFRPL-KIMENDSGST-PIPF 188 (192)
Q Consensus 155 ---d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~~~-~~~~ 188 (192)
||+|. .++++++++++++|. +++|...+.. ++++
T Consensus 241 ~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~ 280 (350)
T COG1063 241 VVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPA 280 (350)
T ss_pred EEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCH
Confidence 89994 589999999999995 5888887664 4444
No 10
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.88 E-value=2.3e-21 Score=156.92 Aligned_cols=165 Identities=42% Similarity=0.556 Sum_probs=127.4
Q ss_pred hccccccCCCCCCCeEEEEEEEeeeChhhhhhhcc----c-----C-----CCcccccCCCC------------------
Q 029543 16 QNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSK----L-----D-----TSLFYSFCPGG------------------ 63 (192)
Q Consensus 16 ~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~----~-----~-----~~~~~~~~~g~------------------ 63 (192)
++....+.|.+.++|||||+.++++||.++..... . . .+....|..|+
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~~~~~GdrV~~~~~~~~~~~~~~~~ 98 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKD 98 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCCCCCCCCEEEEecCceeeEEechhh
Confidence 33445677888899999999999999976643210 0 0 00000111111
Q ss_pred --------------------CchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 029543 64 --------------------VIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL 123 (192)
Q Consensus 64 --------------------~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~ 123 (192)
.+++++|||+++.+..++++|++|+|+||+|++|++++|+||..|++|+++++++++.++
T Consensus 99 ~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~ 178 (325)
T TIGR02825 99 LEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY 178 (325)
T ss_pred eEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 145689999998788899999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 124 LKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 124 ~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
++ ++|++.++|+++.+++.+.++..+++++ |++|++.+..++++++++|+ +.+|..+
T Consensus 179 ~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 179 LK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred HH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence 99 9999999998763256666666554455 99999889999999999995 5777643
No 11
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.88 E-value=4.7e-21 Score=156.77 Aligned_cols=118 Identities=62% Similarity=0.880 Sum_probs=102.0
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
+++++|||+++.+..++++|++|+|+|++|++|++++|+||++|++|+++++++++.+.+++++|++.++|+++++++.+
T Consensus 140 ~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~ 219 (348)
T PLN03154 140 GMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDA 219 (348)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHH
Confidence 56788999999777889999999999988999999999999999999999999999999874699999999875326777
Q ss_pred HHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 145 ALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 145 ~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
.+++.+++|+ |++|+..+..++++++++|+ +.+|..++
T Consensus 220 ~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~ 262 (348)
T PLN03154 220 ALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSL 262 (348)
T ss_pred HHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECcccc
Confidence 7877765455 99999999999999999995 67887654
No 12
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.87 E-value=8.1e-22 Score=160.86 Aligned_cols=166 Identities=16% Similarity=0.166 Sum_probs=127.0
Q ss_pred cccchhhhhhhhccccc-----cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHh
Q 029543 5 IRNTSKRLCKIQNILKQ-----NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEIC 79 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~-----~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~ 79 (192)
|+++++|+|.+....|. ..+|+++||++++...+.. +|+..+ +..+...++++|+|+++ +..
T Consensus 99 c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~-------~P~~l~-----~~~aa~~~~~~~a~~al-~~~ 165 (343)
T PRK09880 99 CLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIP-------YPEKAD-----EKVMAFAEPLAVAIHAA-HQA 165 (343)
T ss_pred hcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEE-------CCCCCC-----HHHHHhhcHHHHHHHHH-Hhc
Confidence 67899999999877664 3579999999999876652 332211 11111255889999999 455
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV---- 154 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~---- 154 (192)
...+|++|+|+| +|++|++++|+||++|+ +|++++++++|++.++ ++|+++++|++++ ++.+..+ ..+ ++
T Consensus 166 ~~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~~-~~g-~~D~vi 240 (343)
T PRK09880 166 GDLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVNPQND-DLDHYKA-EKG-YFDVSF 240 (343)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEecCCcc-cHHHHhc-cCC-CCCEEE
Confidence 667899999999 69999999999999999 7999999999999999 9999999998876 6554332 222 33
Q ss_pred ccccH-HHHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 155 DFVGI-EYCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 155 d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
|++|+ ..++.++++++++|+ +.+|......++++
T Consensus 241 d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~ 276 (343)
T PRK09880 241 EVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPM 276 (343)
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCH
Confidence 99996 588999999999995 67887554445544
No 13
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.87 E-value=7.6e-21 Score=150.34 Aligned_cols=120 Identities=26% Similarity=0.197 Sum_probs=107.8
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD 143 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 143 (192)
.|..+|.+.++.+.+++++|++|.|.| .|++|+.++|-|+..|+ +||+++.+++|+++++ +||+++++|.++..++.
T Consensus 167 GCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~-~fGAT~~vn~~~~~~vv 244 (366)
T COG1062 167 GCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVV 244 (366)
T ss_pred eeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH-hcCCceeecchhhhhHH
Confidence 788999999988999999999999999 99999999999999999 9999999999999999 99999999998763589
Q ss_pred HHHHhhccCCc----ccccH-HHHHHHHHhhcCCC-eEEEeeCCCCCcc
Q 029543 144 VALKRMFLCWV----DFVGI-EYCRSLLLVLLFRP-LKIMENDSGSTPI 186 (192)
Q Consensus 144 ~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~G-~v~~G~~~~~~~~ 186 (192)
+.+.++|++|+ |++|+ +.+++++++++++| .+++|.......+
T Consensus 245 ~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i 293 (366)
T COG1062 245 EAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEI 293 (366)
T ss_pred HHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCcee
Confidence 99999998665 89995 69999999999999 5788887644333
No 14
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.86 E-value=4.5e-20 Score=149.15 Aligned_cols=165 Identities=39% Similarity=0.580 Sum_probs=131.1
Q ss_pred hhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcc---------cC--------------C-------C---------
Q 029543 14 KIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSK---------LD--------------T-------S--------- 54 (192)
Q Consensus 14 ~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~---------~~--------------~-------~--------- 54 (192)
..++....+.|.+.+++|+|++.++++||.++..... .. + .
T Consensus 19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~~~~~~~~Gd~V~~~~~~~~~~~~~~ 98 (329)
T cd08294 19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDG 98 (329)
T ss_pred cceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEecCCCCCCCCCEEEeeCCeeeEEEECC
Confidence 3456666788889999999999999999965432110 00 0 0
Q ss_pred ----cccccCC------------CCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 55 ----LFYSFCP------------GGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 55 ----~~~~~~~------------g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
...+++. +..+++++|||+++.+..++++|++|+|+||+|++|++++|+|+.+|++|+++++++
T Consensus 99 ~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~ 178 (329)
T cd08294 99 KDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD 178 (329)
T ss_pred ccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 0000111 112567899999997788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 119 EKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 119 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
++.++++ ++|+++++|++++ ++.+.+++.++.++ |++|++.+..++++++++|+ +.+|..
T Consensus 179 ~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 179 DKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred HHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcch
Confidence 9999999 8999999999887 88888887765455 99999999999999999995 567753
No 15
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.86 E-value=5e-20 Score=150.02 Aligned_cols=115 Identities=36% Similarity=0.522 Sum_probs=99.9
Q ss_pred chhHHHHHHHHHHHhCCCCC--CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCccc
Q 029543 65 IMPSVTAFAGLYEICSPKKG--EYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 141 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g--~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 141 (192)
+++++|||+++.+.+++++| ++|+|+||+|++|++++|+||++|+ +|+++++++++.+++++++|++++++++++ +
T Consensus 134 ~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~ 212 (345)
T cd08293 134 GLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-N 212 (345)
T ss_pred CcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-C
Confidence 34688999998777778877 9999999999999999999999999 899999999999999834999999999877 8
Q ss_pred HHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 142 LDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 142 ~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
+.+.+++.++.|+ |++|+..+..++++++++|+ +.+|..
T Consensus 213 ~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 213 VAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred HHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence 8888888765455 89998888999999999995 577753
No 16
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.86 E-value=1.3e-20 Score=149.84 Aligned_cols=160 Identities=19% Similarity=0.124 Sum_probs=121.9
Q ss_pred ccccchhhhhhhhcccccc-------CCCCCCCeEEEEEE-EeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHH
Q 029543 4 SIRNTSKRLCKIQNILKQN-------AAEGSKDTVLLKNL-YLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAG 74 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~-------~~g~~~~~vlv~~~-~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~ 74 (192)
.|+.|++|+|.+....|.. .+|+++||+.++.. ++.. +|+.... ...++ .+++.|+|++
T Consensus 45 ~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~~~~~~-------lP~~~~~~~aa~l-----~~~~~ta~~a 112 (280)
T TIGR03366 45 RCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVP-------VPDDLPDAVAAPA-----GCATATVMAA 112 (280)
T ss_pred hhhCcCcccCCChhhcCcccccCCccccccceeeEEecCCCcEEE-------CCCCCCHHHhhHh-----hhHHHHHHHH
Confidence 3788999999998776643 57999999999975 4442 2221100 11112 5578899999
Q ss_pred HHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-
Q 029543 75 LYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC- 152 (192)
Q Consensus 75 l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~- 152 (192)
+ +.....+|++|+|+| +|++|++++|+||++|++ |++++++++|++.++ ++|++.++++. +..+.+++.+.+
T Consensus 113 l-~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~---~~~~~~~~~~~~~ 186 (280)
T TIGR03366 113 L-EAAGDLKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPSPDRRELAL-SFGATALAEPE---VLAERQGGLQNGR 186 (280)
T ss_pred H-HhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCcEecCch---hhHHHHHHHhCCC
Confidence 9 455667999999999 699999999999999995 999999999999999 99999998864 234455556544
Q ss_pred Cc----ccccH-HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 153 WV----DFVGI-EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 153 g~----d~~g~-~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
++ |++|. ..++.++++++++|+ +.+|...
T Consensus 187 g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~ 221 (280)
T TIGR03366 187 GVDVALEFSGATAAVRACLESLDVGGTAVLAGSVF 221 (280)
T ss_pred CCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCC
Confidence 54 89984 578999999999995 5788654
No 17
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.85 E-value=1e-20 Score=154.76 Aligned_cols=175 Identities=20% Similarity=0.203 Sum_probs=131.5
Q ss_pred ccccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCccccc-CCCCCchhHHHHHHHHHHHhCCC
Q 029543 4 SIRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSF-CPGGVIMPSVTAFAGLYEICSPK 82 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~-~~g~~~~~~~ta~~~l~~~~~~~ 82 (192)
.|++|+.|+|.+....|...+|+++||+.++...+..-|..... +.. .++ ......+++.|+|+++ ...+++
T Consensus 93 ~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~-~~~-----~~~~~~a~~~~~~~ta~~a~-~~~~~~ 165 (349)
T TIGR03201 93 LCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLA-AAG-----LPLEHVSVVADAVTTPYQAA-VQAGLK 165 (349)
T ss_pred hhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCccccc-ccC-----CCHHHhhhhcchHHHHHHHH-HhcCCC
Confidence 36788899999887778777899999999997655522210000 000 001 0111156889999999 457899
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCc--ccHHHHHHhhccC-C------
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEE--PDLDVALKRMFLC-W------ 153 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~~-g------ 153 (192)
+|++|+|+|+ |++|++++|+|+++|++|++++++++|+++++ ++|+++++|+.+. +++.+.+++.+++ |
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d 243 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGW 243 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCCCCcC
Confidence 9999999996 99999999999999999999999999999998 9999999987653 1466777777654 3
Q ss_pred -c-ccccH-HHHHHHHHhhcCCCe-EEEeeCCCCCccc
Q 029543 154 -V-DFVGI-EYCRSLLLVLLFRPL-KIMENDSGSTPIP 187 (192)
Q Consensus 154 -~-d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~~~~~~ 187 (192)
+ |++|+ ..++.++++++++|+ +.+|...++.+++
T Consensus 244 ~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~ 281 (349)
T TIGR03201 244 KIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYR 281 (349)
T ss_pred EEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccC
Confidence 2 78885 477889999999995 5788766544444
No 18
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.85 E-value=3.7e-20 Score=152.66 Aligned_cols=164 Identities=13% Similarity=0.056 Sum_probs=128.8
Q ss_pred ccccchhhhhhhhccc---ccc------------------CCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCC
Q 029543 4 SIRNTSKRLCKIQNIL---KQN------------------AAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCP 61 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~---g~~------------------~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~ 61 (192)
.|+.|++|+|.+.... |.. .+|+++||+.++...+..- |+.... ....+
T Consensus 102 ~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~l-------P~~l~~~~aa~~-- 172 (371)
T cd08281 102 PCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKI-------DKDVPLEIAALF-- 172 (371)
T ss_pred cccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEEC-------CCCCChHHhhhh--
Confidence 4789999999875432 211 1368999999998776632 322110 01111
Q ss_pred CCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcc
Q 029543 62 GGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 140 (192)
Q Consensus 62 g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 140 (192)
.++++|||+++.+..++++|++|+|.| +|++|++++|+||++|+ +|++++++++|++.++ ++|+++++++.++
T Consensus 173 ---~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~- 246 (371)
T cd08281 173 ---GCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-ELGATATVNAGDP- 246 (371)
T ss_pred ---cchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HcCCceEeCCCch-
Confidence 457899999987778899999999999 79999999999999999 7999999999999999 9999999998877
Q ss_pred cHHHHHHhhccCCc----ccccH-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 141 DLDVALKRMFLCWV----DFVGI-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 141 ~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
++.+.+++.+++++ |++|. ..++.++++++++|+ +.+|..++
T Consensus 247 ~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~ 294 (371)
T cd08281 247 NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDP 294 (371)
T ss_pred hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCC
Confidence 88888888765444 89984 689999999999995 57887643
No 19
>PLN02740 Alcohol dehydrogenase-like
Probab=99.84 E-value=5.6e-20 Score=152.12 Aligned_cols=165 Identities=17% Similarity=0.180 Sum_probs=127.2
Q ss_pred cccchhhhhhhhccccc------------------------cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-ccccc
Q 029543 5 IRNTSKRLCKIQNILKQ------------------------NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSF 59 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~------------------------~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~ 59 (192)
|+++..|+|++....+. ..+|+++||++++...+. .+|+.... ....
T Consensus 107 c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~-------~iP~~~~~~~aa~- 178 (381)
T PLN02740 107 CKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV-------KIDPNAPLKKMSL- 178 (381)
T ss_pred hcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE-------ECCCCCCHHHhhh-
Confidence 67888999998653221 136899999999877655 22222100 0111
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCC
Q 029543 60 CPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKE 138 (192)
Q Consensus 60 ~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~ 138 (192)
..+++.|||+++.+..++++|++|+|+| +|++|++++|+||.+|+ +|++++++++|++.++ ++|++.++|+.+
T Consensus 179 ----l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~ 252 (381)
T PLN02740 179 ----LSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EMGITDFINPKD 252 (381)
T ss_pred ----hcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-HcCCcEEEeccc
Confidence 1557899999886778999999999999 69999999999999999 7999999999999999 999999999775
Q ss_pred c-ccHHHHHHhhccCCc----ccccH-HHHHHHHHhhcCC-Ce-EEEeeCCCC
Q 029543 139 E-PDLDVALKRMFLCWV----DFVGI-EYCRSLLLVLLFR-PL-KIMENDSGS 183 (192)
Q Consensus 139 ~-~~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~-G~-v~~G~~~~~ 183 (192)
. .++.+.+++.+.+++ |++|+ ..++.++++++++ |+ +++|...+.
T Consensus 253 ~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~ 305 (381)
T PLN02740 253 SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP 305 (381)
T ss_pred ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC
Confidence 3 147777877765444 99995 6899999999997 84 688876543
No 20
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.84 E-value=8.5e-20 Score=150.38 Aligned_cols=164 Identities=15% Similarity=0.109 Sum_probs=125.5
Q ss_pred ccccchhhhhhhhcc---cccc------------------CCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCC
Q 029543 4 SIRNTSKRLCKIQNI---LKQN------------------AAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCP 61 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~---~g~~------------------~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~ 61 (192)
.|++|+.|+|.+... .|.. .+|+++||+.++...+.. +|+..+. ....+
T Consensus 96 ~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~-------lP~~l~~~~aa~l-- 166 (368)
T TIGR02818 96 FCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAK-------INPAAPLEEVCLL-- 166 (368)
T ss_pred hhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEE-------CCCCCCHHHhhhh--
Confidence 378889999987532 1111 247899999999877663 3322100 01111
Q ss_pred CCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc-
Q 029543 62 GGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE- 139 (192)
Q Consensus 62 g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~- 139 (192)
.+++.|+|+++.+..++++|++|+|+| +|++|++++|+||++|+ +|++++++++|++.++ ++|++.++|+++.
T Consensus 167 ---~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~~ 241 (368)
T TIGR02818 167 ---GCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KLGATDCVNPNDYD 241 (368)
T ss_pred ---cchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCeEEcccccc
Confidence 558899999987778899999999998 69999999999999999 8999999999999998 9999999987642
Q ss_pred ccHHHHHHhhccCCc----ccccH-HHHHHHHHhhcCC-Ce-EEEeeCC
Q 029543 140 PDLDVALKRMFLCWV----DFVGI-EYCRSLLLVLLFR-PL-KIMENDS 181 (192)
Q Consensus 140 ~~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~-G~-v~~G~~~ 181 (192)
.++.+.+++.+.+++ |++|+ ..+..++++++++ |+ +.+|...
T Consensus 242 ~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~ 290 (368)
T TIGR02818 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAG 290 (368)
T ss_pred hhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccC
Confidence 156777777765444 99995 6889999999986 85 5788754
No 21
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.84 E-value=5e-20 Score=149.85 Aligned_cols=162 Identities=19% Similarity=0.154 Sum_probs=127.7
Q ss_pred cccchhhhhhhhcc-ccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 5 IRNTSKRLCKIQNI-LKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~-~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
|+.|..++|.+.+. .|...+|++++|+.++...+.. +|+..... .....+++++|||+++ +..++.+
T Consensus 96 c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~-------~P~~~~~~----~aa~l~~~~~ta~~~l-~~~~~~~ 163 (339)
T cd08239 96 CRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIP-------LPDDLSFA----DGALLLCGIGTAYHAL-RRVGVSG 163 (339)
T ss_pred hhCcCcccCcCcccccccCCCCcceeEEEechHHeEE-------CCCCCCHH----HhhhhcchHHHHHHHH-HhcCCCC
Confidence 67888999988764 6777789999999999876653 22221000 0011156889999999 5678899
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccc
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFV 157 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~ 157 (192)
|++|+|+| +|++|++++|+||++|++ |++++++++|++.++ ++|++.++|++++ + .+.+.+.+.+ ++ |++
T Consensus 164 g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-~~~~~~~~~~~~~d~vid~~ 239 (339)
T cd08239 164 RDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD-D-VQEIRELTSGAGADVAIECS 239 (339)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc-h-HHHHHHHhCCCCCCEEEECC
Confidence 99999998 699999999999999997 999999999999998 9999999998876 6 6667766654 55 899
Q ss_pred cHH-HHHHHHHhhcCCCe-EEEeeCCC
Q 029543 158 GIE-YCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 158 g~~-~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
|+. .++.++++++++|+ +.+|....
T Consensus 240 g~~~~~~~~~~~l~~~G~~v~~g~~~~ 266 (339)
T cd08239 240 GNTAARRLALEAVRPWGRLVLVGEGGE 266 (339)
T ss_pred CCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 965 56889999999995 57887543
No 22
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.83 E-value=2e-19 Score=146.32 Aligned_cols=114 Identities=33% Similarity=0.368 Sum_probs=100.4
Q ss_pred chhHHHHHHHHHHHh------CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCC
Q 029543 65 IMPSVTAFAGLYEIC------SPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKE 138 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~------~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~ 138 (192)
++++.|||.++.+.. +.++|++|||+||+|++|++++|+|++.++..++++++++++++++ ++|+|+++||++
T Consensus 133 p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 133 PLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKD 211 (347)
T ss_pred chHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCC
Confidence 889999999998888 8999999999999999999999999999976666666899999999 999999999999
Q ss_pred cccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCC-eEEEeeC
Q 029543 139 EPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRP-LKIMEND 180 (192)
Q Consensus 139 ~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G-~v~~G~~ 180 (192)
+ ++.+.+++.+.+++ ||+|+..+...+.++..+| ...++..
T Consensus 212 ~-~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~ 257 (347)
T KOG1198|consen 212 E-NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLV 257 (347)
T ss_pred H-HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEec
Confidence 8 99999999874366 9999988888899988887 3344443
No 23
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=1.9e-19 Score=140.78 Aligned_cols=121 Identities=21% Similarity=0.198 Sum_probs=108.4
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcc-cH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP-DL 142 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~ 142 (192)
.|...|+|.|.-+.+++++|++|.|+| .|++|+.++|-||+.|| +||++|.+++|.+.++ ++|+++.||+.+-. .+
T Consensus 174 gCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak-~fGaTe~iNp~d~~~~i 251 (375)
T KOG0022|consen 174 GCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK-EFGATEFINPKDLKKPI 251 (375)
T ss_pred eccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH-hcCcceecChhhccccH
Confidence 788899999988999999999999999 99999999999999999 9999999999999999 99999999987422 58
Q ss_pred HHHHHhhccCCc----ccccH-HHHHHHHHhhcCC-C-eEEEeeCCCCCccc
Q 029543 143 DVALKRMFLCWV----DFVGI-EYCRSLLLVLLFR-P-LKIMENDSGSTPIP 187 (192)
Q Consensus 143 ~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~-G-~v~~G~~~~~~~~~ 187 (192)
.+.++++|++|+ ||+|+ +++++++.+.+.+ | .|++|......+++
T Consensus 252 ~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~ 303 (375)
T KOG0022|consen 252 QEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEIS 303 (375)
T ss_pred HHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccc
Confidence 889999998877 89995 6999999999999 8 58999876655443
No 24
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.83 E-value=1.9e-19 Score=147.76 Aligned_cols=164 Identities=14% Similarity=0.073 Sum_probs=126.0
Q ss_pred cccchhhhhhhhccc--------cc-----cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHH
Q 029543 5 IRNTSKRLCKIQNIL--------KQ-----NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTA 71 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~--------g~-----~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta 71 (192)
|++|+.++|...... |. ..+|+++||+.++...+..-|... +.. ....+ .++++|+
T Consensus 96 c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~---~~~---~aa~l-----~~~~~ta 164 (358)
T TIGR03451 96 CKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAA---DPA---AAGLL-----GCGVMAG 164 (358)
T ss_pred HhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCC---Chh---Hhhhh-----cccchhh
Confidence 567788888753211 11 125899999999987666322211 000 01111 4577888
Q ss_pred HHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhc
Q 029543 72 FAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMF 150 (192)
Q Consensus 72 ~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 150 (192)
|+++.+..++++|++|+|+| +|++|++++|+||++|+ +|++++++++|+++++ ++|+++++|+.++ ++.+.+++.+
T Consensus 165 ~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~i~~~~ 241 (358)
T TIGR03451 165 LGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGATHTVNSSGT-DPVEAIRALT 241 (358)
T ss_pred HHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcCCCc-CHHHHHHHHh
Confidence 98876778899999999998 69999999999999999 6999999999999999 9999999998876 8888888877
Q ss_pred cC-Cc----ccccH-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 151 LC-WV----DFVGI-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 151 ~~-g~----d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
++ ++ |++|+ ..++.++++++++|+ +.+|...+
T Consensus 242 ~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~ 280 (358)
T TIGR03451 242 GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP 280 (358)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC
Confidence 64 55 99995 689999999999995 57887654
No 25
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.83 E-value=1.5e-19 Score=147.55 Aligned_cols=165 Identities=16% Similarity=0.210 Sum_probs=126.8
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
|+.|.+++|.+....|...+|++++|+.++...+. .+|... ++..+....+++++++++ +...+.+|
T Consensus 95 c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~-------~lP~~~-----s~~~aa~~~~~~~~~~~~-~~~~~~~g 161 (347)
T PRK10309 95 CLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLF-------ALPTDM-----PIEDGAFIEPITVGLHAF-HLAQGCEG 161 (347)
T ss_pred hhCcCcccCCCcceeccCCCCccceeEEeehHHeE-------ECcCCC-----CHHHhhhhhHHHHHHHHH-HhcCCCCC
Confidence 67888999998877888889999999999986655 223221 111111123567788887 66788899
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc-----ccc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV-----DFV 157 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~-----d~~ 157 (192)
++|+|+| +|++|++++|+|+++|++ |+++++++++++.++ ++|+++++|+++. + .+.+.+.+.+ ++ |++
T Consensus 162 ~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~~~~~~~~~~~~~d~~v~d~~ 237 (347)
T PRK10309 162 KNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S-APQIQSVLRELRFDQLILETA 237 (347)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C-HHHHHHHhcCCCCCeEEEECC
Confidence 9999998 799999999999999995 889999999999998 9999999998765 5 4455555543 33 899
Q ss_pred cH-HHHHHHHHhhcCCCe-EEEeeCCCCCcc
Q 029543 158 GI-EYCRSLLLVLLFRPL-KIMENDSGSTPI 186 (192)
Q Consensus 158 g~-~~~~~~~~~l~~~G~-v~~G~~~~~~~~ 186 (192)
|+ ..+..++++++++|+ +++|...++.++
T Consensus 238 G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~ 268 (347)
T PRK10309 238 GVPQTVELAIEIAGPRAQLALVGTLHHDLHL 268 (347)
T ss_pred CCHHHHHHHHHHhhcCCEEEEEccCCCCccc
Confidence 95 588999999999995 578876554333
No 26
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.82 E-value=2.5e-19 Score=148.80 Aligned_cols=165 Identities=19% Similarity=0.189 Sum_probs=121.0
Q ss_pred ccccchhhhhhhhc------cccc----cCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCCcccccCCCCCchhHHHH
Q 029543 4 SIRNTSKRLCKIQN------ILKQ----NAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTA 71 (192)
Q Consensus 4 ~~~~g~~~~C~~~~------~~g~----~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta 71 (192)
.|++|++|+|.+.. .+|+ ..+|+++||++++.. .+. .+|+...............++++|+
T Consensus 102 ~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~-------~vP~~~~~~~~~~~~a~l~~~~~ta 174 (393)
T TIGR02819 102 NCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLL-------KFPDRDQALEKIRDLTMLSDIFPTG 174 (393)
T ss_pred HHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceE-------ECCCcccccccccceeeeccHHHHH
Confidence 37899999999753 2343 247999999999963 233 2222111100001112226689999
Q ss_pred HHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecC-CcccHHHHHHhh
Q 029543 72 FAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYK-EEPDLDVALKRM 149 (192)
Q Consensus 72 ~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~-~~~~~~~~i~~~ 149 (192)
|+++ +..++.+|++|+|.| +|++|++++|+|+++|++ |++++++++|++.++ ++|++. +++. +. ++.+.+.+.
T Consensus 175 ~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~ 249 (393)
T TIGR02819 175 YHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-SFGCET-VDLSKDA-TLPEQIEQI 249 (393)
T ss_pred HHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HcCCeE-EecCCcc-cHHHHHHHH
Confidence 9999 567899999999977 899999999999999995 566678889999999 999975 5543 34 677778777
Q ss_pred ccC-Cc----ccccHH---------------HHHHHHHhhcCCCe-EEEeeC
Q 029543 150 FLC-WV----DFVGIE---------------YCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 150 ~~~-g~----d~~g~~---------------~~~~~~~~l~~~G~-v~~G~~ 180 (192)
+.+ ++ |++|.+ .+++++++++++|+ +++|..
T Consensus 250 ~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 250 LGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred cCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence 654 55 899953 79999999999995 588886
No 27
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.82 E-value=1.4e-19 Score=148.70 Aligned_cols=167 Identities=14% Similarity=0.152 Sum_probs=121.9
Q ss_pred ccccchhhhhhhhccc-------cccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHH
Q 029543 4 SIRNTSKRLCKIQNIL-------KQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGL 75 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~-------g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l 75 (192)
.|++|.+|+|++.... |...+|+++||+.++...+.. +|+.... ...++ .+++.|+|+++
T Consensus 108 ~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~-------lP~~ls~~~aa~l-----~~~~~ta~~al 175 (360)
T PLN02586 108 SCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLR-------FPDNLPLDAGAPL-----LCAGITVYSPM 175 (360)
T ss_pred cccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeee-------CCCCCCHHHhhhh-----hcchHHHHHHH
Confidence 3789999999986543 445689999999999876652 2322100 11112 56788999998
Q ss_pred HHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHhcCCCeeeecCCcccHHHHHHhhccC-C
Q 029543 76 YEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD-LLKNKFGFDDAFNYKEEPDLDVALKRMFLC-W 153 (192)
Q Consensus 76 ~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g 153 (192)
.+...+++|++|+|.| +|++|++++|+||++|++|++++.+++++. .++ ++|+++++|+.+. + .+++.+++ .
T Consensus 176 ~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~~vi~~~~~-~---~~~~~~~~~D 249 (360)
T PLN02586 176 KYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGADSFLVSTDP-E---KMKAAIGTMD 249 (360)
T ss_pred HHhcccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCcEEEcCCCH-H---HHHhhcCCCC
Confidence 6666678999999988 799999999999999999888887776654 556 8999999987643 2 34444432 2
Q ss_pred c--ccccH-HHHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 154 V--DFVGI-EYCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 154 ~--d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
+ |++|. ..++.++++++++|+ +.+|...++.++++
T Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~ 288 (360)
T PLN02586 250 YIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPI 288 (360)
T ss_pred EEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCH
Confidence 2 99996 588999999999995 57887655445554
No 28
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.82 E-value=1.6e-19 Score=146.63 Aligned_cols=156 Identities=13% Similarity=0.047 Sum_probs=120.8
Q ss_pred ccccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCC
Q 029543 4 SIRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPK 82 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~ 82 (192)
.|+.|+.++|.+....|...+|+++||+.++...+.. +|+.... ...++ ++++.|||+++ +..+++
T Consensus 98 ~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~-------lP~~~~~~~aa~l-----~~~~~ta~~~~-~~~~~~ 164 (329)
T TIGR02822 98 YCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYR-------LPTGYDDVELAPL-----LCAGIIGYRAL-LRASLP 164 (329)
T ss_pred HHhCcCcccCCCcccCCcccCCcceeEEEeccccEEE-------CCCCCCHHHhHHH-----hccchHHHHHH-HhcCCC
Confidence 3678899999998888887889999999999887663 2322100 11112 56889999999 567899
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cccccc-HH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WVDFVG-IE 160 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~d~~g-~~ 160 (192)
+|++|+|+| +|++|++++|+||.+|++|++++++++|++.++ ++|+++++|+.+. +. + .-+ -+++.+ ++
T Consensus 165 ~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~~-----~-~~d~~i~~~~~~~ 235 (329)
T TIGR02822 165 PGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-PP-----E-PLDAAILFAPAGG 235 (329)
T ss_pred CCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-Cc-----c-cceEEEECCCcHH
Confidence 999999999 599999999999999999999999999999999 9999999986432 10 0 001 125554 56
Q ss_pred HHHHHHHhhcCCCe-EEEeeCC
Q 029543 161 YCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 161 ~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+..++++++++|+ +++|...
T Consensus 236 ~~~~~~~~l~~~G~~v~~G~~~ 257 (329)
T TIGR02822 236 LVPPALEALDRGGVLAVAGIHL 257 (329)
T ss_pred HHHHHHHhhCCCcEEEEEeccC
Confidence 89999999999995 5778753
No 29
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.81 E-value=6e-19 Score=145.30 Aligned_cols=164 Identities=20% Similarity=0.188 Sum_probs=125.9
Q ss_pred ccccchhhhhhhhccc---cc------------------cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCC
Q 029543 4 SIRNTSKRLCKIQNIL---KQ------------------NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCP 61 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~---g~------------------~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~ 61 (192)
.|++++.|+|.+.... |. ..+|+++||+.++..++.. +|+.... ....+
T Consensus 97 ~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~-------iP~~l~~~~aa~l-- 167 (368)
T cd08300 97 FCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAK-------INPEAPLDKVCLL-- 167 (368)
T ss_pred hhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEe-------CCCCCChhhhhhh--
Confidence 3778899999875321 11 1246899999999877663 2221100 01111
Q ss_pred CCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcc
Q 029543 62 GGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 140 (192)
Q Consensus 62 g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 140 (192)
.+++.|+|+++.+..++++|++|+|+| +|++|++++|+||++|+ +|++++++++|++.++ ++|+++++|+++.+
T Consensus 168 ---~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~~ 242 (368)
T cd08300 168 ---GCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KFGATDCVNPKDHD 242 (368)
T ss_pred ---ccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccc
Confidence 457899999987778899999999998 69999999999999999 7999999999999998 99999999987531
Q ss_pred -cHHHHHHhhccCCc----ccccH-HHHHHHHHhhcCC-Ce-EEEeeCC
Q 029543 141 -DLDVALKRMFLCWV----DFVGI-EYCRSLLLVLLFR-PL-KIMENDS 181 (192)
Q Consensus 141 -~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~-G~-v~~G~~~ 181 (192)
++.+.+++.+++++ |++|+ ..+..++++++++ |+ +.+|...
T Consensus 243 ~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~ 291 (368)
T cd08300 243 KPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA 291 (368)
T ss_pred hHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence 47778887776555 89995 5899999999987 85 5788764
No 30
>PLN02827 Alcohol dehydrogenase-like
Probab=99.81 E-value=8.7e-19 Score=144.91 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=126.2
Q ss_pred ccccchhhhhhhhccc----------------c-----ccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCC
Q 029543 4 SIRNTSKRLCKIQNIL----------------K-----QNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCP 61 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~----------------g-----~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~ 61 (192)
.|++++++.|++.... | +..+|+++||+.++...+. .+|+.... ....+
T Consensus 104 ~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~-------~iP~~l~~~~aa~l-- 174 (378)
T PLN02827 104 HCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV-------KVDPLAPLHKICLL-- 174 (378)
T ss_pred hhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE-------ECCCCCCHHHhhhh--
Confidence 3788999999875321 1 0124899999999987665 22322110 01111
Q ss_pred CCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc-
Q 029543 62 GGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE- 139 (192)
Q Consensus 62 g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~- 139 (192)
.++++++|+++.+..++.+|++|+|+| +|++|++++|+||++|+ +|++++++++|+++++ ++|+++++++++.
T Consensus 175 ---~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~ 249 (378)
T PLN02827 175 ---SCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK-TFGVTDFINPNDLS 249 (378)
T ss_pred ---cchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEEEcccccc
Confidence 457788888776667899999999999 69999999999999999 6888898999999999 9999999988751
Q ss_pred ccHHHHHHhhccCCc----ccccH-HHHHHHHHhhcCC-Ce-EEEeeCCCCCcc
Q 029543 140 PDLDVALKRMFLCWV----DFVGI-EYCRSLLLVLLFR-PL-KIMENDSGSTPI 186 (192)
Q Consensus 140 ~~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~-G~-v~~G~~~~~~~~ 186 (192)
+++.+.+++.+.+++ |++|. ..+..+++.++++ |+ +.+|...++.++
T Consensus 250 ~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~ 303 (378)
T PLN02827 250 EPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEV 303 (378)
T ss_pred hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccc
Confidence 167777877765444 89996 4789999999998 85 578876544333
No 31
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.80 E-value=6.9e-19 Score=145.37 Aligned_cols=167 Identities=15% Similarity=0.167 Sum_probs=121.1
Q ss_pred ccccchhhhhhhhccc-------cccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHH
Q 029543 4 SIRNTSKRLCKIQNIL-------KQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGL 75 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~-------g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l 75 (192)
.|++|++|+|++.... |...+|+++||++++...+.. +|+.... ...++ .+++.|+|+++
T Consensus 102 ~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~-------lP~~ls~~~aa~l-----~~~~~ta~~al 169 (375)
T PLN02178 102 SCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLS-------IPDGLPSDSGAPL-----LCAGITVYSPM 169 (375)
T ss_pred hHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEE-------CCCCCCHHHcchh-----hccchHHHHHH
Confidence 3789999999986532 444579999999999876653 3322110 01112 56788999998
Q ss_pred HHHhC-CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCeeeecCCcccHHHHHHhhccC-
Q 029543 76 YEICS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK-VDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC- 152 (192)
Q Consensus 76 ~~~~~-~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~- 152 (192)
.+... .++|++|+|.| +|++|++++|+||++|++|+++++++++ .+.++ ++|+++++++.+. +.+++.+++
T Consensus 170 ~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i~~~~~----~~v~~~~~~~ 243 (375)
T PLN02178 170 KYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGADSFLVTTDS----QKMKEAVGTM 243 (375)
T ss_pred HHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCcEEEcCcCH----HHHHHhhCCC
Confidence 54332 35899999999 6999999999999999999999877554 67777 9999999987542 234444432
Q ss_pred Cc--ccccHH-HHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 153 WV--DFVGIE-YCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 153 g~--d~~g~~-~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
.+ |++|.. .+..++++++++|+ +.+|...++.++++
T Consensus 244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~ 283 (375)
T PLN02178 244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPI 283 (375)
T ss_pred cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCH
Confidence 22 999965 78999999999995 57887655444544
No 32
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.80 E-value=2.7e-18 Score=141.40 Aligned_cols=166 Identities=16% Similarity=0.160 Sum_probs=126.1
Q ss_pred ccccchhhhhhhhccc---cc-------------------cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccC
Q 029543 4 SIRNTSKRLCKIQNIL---KQ-------------------NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFC 60 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~---g~-------------------~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~ 60 (192)
.|+.++.|.|.+.... |. ..+|+++||++++...+..-| +.... ....+
T Consensus 97 ~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP-------~~~~~~~aa~~- 168 (369)
T cd08301 97 HCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKIN-------PEAPLDKVCLL- 168 (369)
T ss_pred hhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECC-------CCCCHHHhhhh-
Confidence 4778889999886432 10 134789999999987766322 21100 01111
Q ss_pred CCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc
Q 029543 61 PGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE 139 (192)
Q Consensus 61 ~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~ 139 (192)
.+++.|+|+++.+..++++|++|+|+| +|++|++++|+||++|+ +|++++++++|++.++ ++|++.++++.+.
T Consensus 169 ----~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~ 242 (369)
T cd08301 169 ----SCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK-KFGVTEFVNPKDH 242 (369)
T ss_pred ----cchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEccccc
Confidence 557889999887778899999999998 69999999999999999 8999999999999999 9999999987652
Q ss_pred -ccHHHHHHhhccCCc----ccccH-HHHHHHHHhhcCC-Ce-EEEeeCCCC
Q 029543 140 -PDLDVALKRMFLCWV----DFVGI-EYCRSLLLVLLFR-PL-KIMENDSGS 183 (192)
Q Consensus 140 -~~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~~~-G~-v~~G~~~~~ 183 (192)
+++.+.+++.+++++ |++|+ ..+..++++++++ |+ +.+|....+
T Consensus 243 ~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~ 294 (369)
T cd08301 243 DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD 294 (369)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC
Confidence 157777777665444 89985 5788999999996 85 578876543
No 33
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.79 E-value=1.7e-18 Score=141.57 Aligned_cols=168 Identities=15% Similarity=0.152 Sum_probs=130.7
Q ss_pred cccchhhhhhhhcccccc-CCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 5 IRNTSKRLCKIQNILKQN-AAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~-~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
|+.++.++|.+....|+. .+|++++|+.++...+.. +|+.. ++..+....++.|||+++ ...++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~-------lP~~~-----~~~~aa~~~~~~ta~~~l-~~~~~~~ 172 (351)
T cd08233 106 CKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHK-------LPDNV-----PLEEAALVEPLAVAWHAV-RRSGFKP 172 (351)
T ss_pred HhCcCcccCCCCceeccCCCCCceeeEEEechHHeEE-------CcCCC-----CHHHhhhccHHHHHHHHH-HhcCCCC
Confidence 456777888876655543 368999999998876552 22221 111111134778999999 7788999
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccc
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFV 157 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~ 157 (192)
|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.++++ ++|++.++|+++. ++.+.+++.+++ ++ |++
T Consensus 173 g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~-~~~~~l~~~~~~~~~d~vid~~ 249 (351)
T cd08233 173 GDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLDPTEV-DVVAEVRKLTGGGGVDVSFDCA 249 (351)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCcc-CHHHHHHHHhCCCCCCEEEECC
Confidence 99999998 69999999999999999 8999999999999998 8999999998877 888888887765 45 898
Q ss_pred c-HHHHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 158 G-IEYCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 158 g-~~~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
| ...++.++++++++|+ +.+|..+.+.++++
T Consensus 250 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 282 (351)
T cd08233 250 GVQATLDTAIDALRPRGTAVNVAIWEKPISFNP 282 (351)
T ss_pred CCHHHHHHHHHhccCCCEEEEEccCCCCCccCH
Confidence 8 5688999999999995 67887664444443
No 34
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.79 E-value=3.3e-18 Score=132.41 Aligned_cols=173 Identities=21% Similarity=0.224 Sum_probs=130.4
Q ss_pred hhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccC---------------------CCcccccCCCCC--------
Q 029543 14 KIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLD---------------------TSLFYSFCPGGV-------- 64 (192)
Q Consensus 14 ~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~---------------------~~~~~~~~~g~~-------- 64 (192)
+..+...+.+|.....+|+|+..++++||.+.+.+.+.+ ++....|.+|+.
T Consensus 33 kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~l 112 (354)
T KOG0025|consen 33 KVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSANL 112 (354)
T ss_pred hhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCCC
Confidence 345555666666666679999999999998887776543 222223444443
Q ss_pred -----------------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe
Q 029543 65 -----------------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA 115 (192)
Q Consensus 65 -----------------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 115 (192)
..+.+|||.+|.+.-++.+||+|+-.||++++|+..+|+||++|++-|.++
T Consensus 113 GtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV 192 (354)
T KOG0025|consen 113 GTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV 192 (354)
T ss_pred ccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe
Confidence 667899999998888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHH---hcCCCeeeecCCcccHHH-HHHhhccC--Cc----ccccHHHHHHHHHhhcCCC-eEEEeeCCCC-
Q 029543 116 GSKEKVDLLKN---KFGFDDAFNYKEEPDLDV-ALKRMFLC--WV----DFVGIEYCRSLLLVLLFRP-LKIMENDSGS- 183 (192)
Q Consensus 116 ~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~-~i~~~~~~--g~----d~~g~~~~~~~~~~l~~~G-~v~~G~~~~~- 183 (192)
|+....+.+++ .+||++||...+ +.+ ..+..... .+ +|+|+.......+.|..|| .+.+|.++..
T Consensus 193 RdR~~ieel~~~Lk~lGA~~ViTeee---l~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqP 269 (354)
T KOG0025|consen 193 RDRPNIEELKKQLKSLGATEVITEEE---LRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQP 269 (354)
T ss_pred ecCccHHHHHHHHHHcCCceEecHHH---hcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCC
Confidence 99877776653 689999996542 221 12222111 22 9999999999999999999 5789988754
Q ss_pred Cccccc
Q 029543 184 TPIPFA 189 (192)
Q Consensus 184 ~~~~~~ 189 (192)
.++|..
T Consensus 270 v~~~ts 275 (354)
T KOG0025|consen 270 VTVPTS 275 (354)
T ss_pred cccccc
Confidence 556554
No 35
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.79 E-value=3.3e-18 Score=140.80 Aligned_cols=164 Identities=18% Similarity=0.203 Sum_probs=124.1
Q ss_pred cccchhhhhhhhccc--cc------------------cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCC
Q 029543 5 IRNTSKRLCKIQNIL--KQ------------------NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGG 63 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~--g~------------------~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~ 63 (192)
|+.|..++|++.... |. ...|++++|+.++...+. .+|+.... ....+
T Consensus 97 c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~-------~lP~~l~~~~aa~l---- 165 (365)
T cd08277 97 CRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVA-------KIDPAAPLEHVCLL---- 165 (365)
T ss_pred hcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheE-------ECCCCCCHHHhhHh----
Confidence 678889999886432 11 125789999999887665 22322100 00111
Q ss_pred CchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc-cc
Q 029543 64 VIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE-PD 141 (192)
Q Consensus 64 ~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~ 141 (192)
.++++|||+++.+..++++|++|+|+| +|++|++++|+||++|+ +|++++++++|++.++ ++|+++++++.+. .+
T Consensus 166 -~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~ 242 (365)
T cd08277 166 -GCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK-EFGATDFINPKDSDKP 242 (365)
T ss_pred -cchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCcEeccccccch
Confidence 558899999987778899999999998 79999999999999999 8999999999999998 9999999987652 14
Q ss_pred HHHHHHhhccCCc----cccc-HHHHHHHHHhhcCC-Ce-EEEeeCCC
Q 029543 142 LDVALKRMFLCWV----DFVG-IEYCRSLLLVLLFR-PL-KIMENDSG 182 (192)
Q Consensus 142 ~~~~i~~~~~~g~----d~~g-~~~~~~~~~~l~~~-G~-v~~G~~~~ 182 (192)
+.+.+++.+++++ |++| ...+..++++++++ |+ +.+|...+
T Consensus 243 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 290 (365)
T cd08277 243 VSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG 290 (365)
T ss_pred HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc
Confidence 5677776665444 8999 46889999999885 84 68887653
No 36
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.77 E-value=1.1e-17 Score=135.81 Aligned_cols=169 Identities=20% Similarity=0.197 Sum_probs=131.2
Q ss_pred ccccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCC
Q 029543 4 SIRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPK 82 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~ 82 (192)
.|+.|.++.|.+....+...+|.+++|+.++...+.. +|+.... ....+ ++++.|+|+++. ..++.
T Consensus 96 ~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~-------lp~~~~~~~aa~l-----~~~~~ta~~~~~-~~~~~ 162 (333)
T cd08296 96 ACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALAR-------IPDDLDAAEAAPL-----LCAGVTTFNALR-NSGAK 162 (333)
T ss_pred hhhCcCcccCCCCCccCcccCCcceeEEEEchhheEe-------CCCCCCHHHhhhh-----hhhhHHHHHHHH-hcCCC
Confidence 4678899999988877776678999999998765552 2221100 11112 568889999995 45899
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc--cccc-H
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV--DFVG-I 159 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~--d~~g-~ 159 (192)
++++|+|+| +|++|++++|+||++|++|+++++++++++.++ ++|+++++++.++ ++.+.+++..+-.+ |++| .
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~d~vi~~~g~~ 239 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE-DVAEALQELGGAKLILATAPNA 239 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-cHHHHHHhcCCCCEEEECCCch
Confidence 999999999 899999999999999999999999999999998 9999999998876 77777766521122 8886 6
Q ss_pred HHHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 160 EYCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
..+..++++++++|+ +.+|......+++.
T Consensus 240 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 269 (333)
T cd08296 240 KAISALVGGLAPRGKLLILGAAGEPVAVSP 269 (333)
T ss_pred HHHHHHHHHcccCCEEEEEecCCCCCCcCH
Confidence 788999999999995 67887665445543
No 37
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.76 E-value=3.3e-18 Score=139.61 Aligned_cols=159 Identities=13% Similarity=0.044 Sum_probs=113.2
Q ss_pred chhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHH--hCCCCCC
Q 029543 8 TSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEI--CSPKKGE 85 (192)
Q Consensus 8 g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~--~~~~~g~ 85 (192)
+..|+|.+.+..|...+|+++||++|+..++. .+|+.. ++..+...++++++|+++.+. ..+++|+
T Consensus 98 ~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~-------~vP~~l-----~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~ 165 (341)
T cd08237 98 IPENYLPSSRFRSSGYDGFMQDYVFLPPDRLV-------KLPDNV-----DPEVAAFTELVSVGVHAISRFEQIAHKDRN 165 (341)
T ss_pred chhccCCCcceeEecCCCceEEEEEEchHHeE-------ECCCCC-----ChHHhhhhchHHHHHHHHHHHhhcCCCCCC
Confidence 45678888777777778999999999987665 333321 112222356889999998542 3568899
Q ss_pred EEEEeCCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc-ccccH---
Q 029543 86 YVYVSAASGAVGQLVGQFAKL-AGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV-DFVGI--- 159 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~-~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~-d~~g~--- 159 (192)
+|+|+| +|++|++++|+++. .|+ +|++++++++|+++++ +.+++..++ ++.+. ..-+-+ |++|+
T Consensus 166 ~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-----~~~~~---~g~d~viD~~G~~~~ 235 (341)
T cd08237 166 VIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-----DIPED---LAVDHAFECVGGRGS 235 (341)
T ss_pred EEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-----hhhhc---cCCcEEEECCCCCcc
Confidence 999999 69999999999986 665 8999999999999998 777654332 22111 101112 99994
Q ss_pred -HHHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 160 -EYCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 160 -~~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
.+++.++++++++|+ +++|...++.++++
T Consensus 236 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~ 266 (341)
T cd08237 236 QSAINQIIDYIRPQGTIGLMGVSEYPVPINT 266 (341)
T ss_pred HHHHHHHHHhCcCCcEEEEEeecCCCcccCH
Confidence 478999999999995 57887654444443
No 38
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.76 E-value=1.7e-16 Score=127.87 Aligned_cols=162 Identities=18% Similarity=0.146 Sum_probs=126.7
Q ss_pred hccccccCCCCCCCeEEEEEEEeeeChhhhhhhccc-------------C--------CCcccccCCCCC----------
Q 029543 16 QNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKL-------------D--------TSLFYSFCPGGV---------- 64 (192)
Q Consensus 16 ~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~-------------~--------~~~~~~~~~g~~---------- 64 (192)
.+...++.|...+++|+|++.++++++.+.....+. . ++....+..|+.
T Consensus 16 ~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~ 95 (324)
T cd08292 16 LEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTW 95 (324)
T ss_pred EEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccCCCcc
Confidence 455666777778899999999999988543222110 0 111112223321
Q ss_pred --------------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 65 --------------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 65 --------------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
++.++|+|+++ +..++.+|++|+|+|++|++|++++|+|+++|++++++++++
T Consensus 96 ~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~ 174 (324)
T cd08292 96 AEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD 174 (324)
T ss_pred eeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCH
Confidence 34578889988 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 119 EKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 119 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
++.+.++ ++|+++++++++. ++.+.+++.+.+ ++ |++|+.....++++++++|+ +.+|..
T Consensus 175 ~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 175 AGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred HHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecC
Confidence 9999998 7899999998876 888888888765 66 89998888999999999995 677865
No 39
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.75 E-value=3e-17 Score=134.63 Aligned_cols=163 Identities=18% Similarity=0.157 Sum_probs=123.3
Q ss_pred cccchhhhhhhhccccc-------cCCCCCCCeEEEEEE-EeeeChhhhhhhcccCCCcccccCCCCC-chhHHHHHHHH
Q 029543 5 IRNTSKRLCKIQNILKQ-------NAAEGSKDTVLLKNL-YLSCDPYMQKRMSKLDTSLFYSFCPGGV-IMPSVTAFAGL 75 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~-------~~~g~~~~~vlv~~~-~~~v~p~~~~~~~~~~~~~~~~~~~g~~-~~~~~ta~~~l 75 (192)
|+++..|+|.+....|. ..+|++++|++|+.. ++.. +|+.. ++..+.. +++++|||+++
T Consensus 102 ~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~-------lP~~~-----~~~~aa~~~~~~~ta~~al 169 (361)
T cd08231 102 CLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVR-------VPDNV-----PDEVAAPANCALATVLAAL 169 (361)
T ss_pred HhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEE-------CCCCC-----CHHHHHHhcCHHHHHHHHH
Confidence 56778899988766654 246899999999874 4442 22210 1111111 46899999999
Q ss_pred HHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcc--cHHHHHHhhccC
Q 029543 76 YEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP--DLDVALKRMFLC 152 (192)
Q Consensus 76 ~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~~i~~~~~~ 152 (192)
.+.....+|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++.. ++.+.+++.+++
T Consensus 170 ~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~ 247 (361)
T cd08231 170 DRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGADATIDIDELPDPQRRAIVRDITGG 247 (361)
T ss_pred HhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCCeEEcCcccccHHHHHHHHHHhCC
Confidence 6666666999999998 79999999999999999 9999999999999998 99999999876541 233567777654
Q ss_pred -Cc----ccccH-HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 153 -WV----DFVGI-EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 153 -g~----d~~g~-~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
++ |++|+ ..+..++++++++|+ +.+|...
T Consensus 248 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 283 (361)
T cd08231 248 RGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVA 283 (361)
T ss_pred CCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCC
Confidence 55 88885 678999999999995 5777654
No 40
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.75 E-value=3.5e-17 Score=134.15 Aligned_cols=158 Identities=14% Similarity=0.128 Sum_probs=114.0
Q ss_pred cccchhhhhhhhccc--cc-cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHH----
Q 029543 5 IRNTSKRLCKIQNIL--KQ-NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYE---- 77 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~--g~-~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~---- 77 (192)
|+.|++++|.+.... |. ..+|+++||++++...+.. +|+... . .+...++++++++++..
T Consensus 98 c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~-------~P~~~~-~-----~a~~~~p~~~~~~a~~~~~~~ 164 (355)
T cd08230 98 CRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVK-------VPPSLA-D-----VGVLLEPLSVVEKAIEQAEAV 164 (355)
T ss_pred hhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEE-------CCCCCC-c-----ceeecchHHHHHHHHHHHhhh
Confidence 567888899875443 33 2578999999999887663 333211 1 11114466666655532
Q ss_pred --HhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC
Q 029543 78 --ICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC 152 (192)
Q Consensus 78 --~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~ 152 (192)
...+.+|++|+|+| +|++|++++|+||++|++|+++++ +++|++.++ ++|++. +++.++ ++.+ .+ .. +
T Consensus 165 ~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~-v~~~~~-~~~~-~~-~~-~ 237 (355)
T cd08230 165 QKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATY-VNSSKT-PVAE-VK-LV-G 237 (355)
T ss_pred hhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEE-ecCCcc-chhh-hh-hc-C
Confidence 12356899999999 699999999999999999999998 688999999 999987 566655 5544 22 22 2
Q ss_pred Cc----ccccH-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 153 WV----DFVGI-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 153 g~----d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
++ |++|. ..+..+++.++++|+ +.+|..++
T Consensus 238 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 273 (355)
T cd08230 238 EFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGG 273 (355)
T ss_pred CCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCC
Confidence 33 99995 578999999999995 58888765
No 41
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.75 E-value=2.4e-16 Score=127.54 Aligned_cols=114 Identities=29% Similarity=0.378 Sum_probs=94.4
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEe-CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVS-AASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD 143 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~-Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 143 (192)
+++++|||..+ +..+. ++++++|+ |++|++|++++|+||++|++|++++++++|++.++ ++|++++++++++ ++.
T Consensus 126 ~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~ 201 (324)
T cd08291 126 FVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFL 201 (324)
T ss_pred cccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHH
Confidence 45567787555 55555 56666665 77999999999999999999999999999999999 8999999998877 888
Q ss_pred HHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 144 VALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 144 ~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
+.+++.+.+ ++ |++|+......+++++++|+ +.+|..++
T Consensus 202 ~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 246 (324)
T cd08291 202 EDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSG 246 (324)
T ss_pred HHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCC
Confidence 888887765 55 89998888889999999995 67887544
No 42
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.75 E-value=3.9e-17 Score=135.56 Aligned_cols=165 Identities=18% Similarity=0.151 Sum_probs=126.3
Q ss_pred cccchhhhhhhhcccccc-CCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHH--hCC
Q 029543 5 IRNTSKRLCKIQNILKQN-AAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEI--CSP 81 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~-~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~--~~~ 81 (192)
|..+..++|.+....|+. ..|++++|+.++...+..-|... +.. .... .+++++|||+++... +++
T Consensus 123 c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l---~~~---~aa~-----l~~~~~tA~~al~~~~~~~~ 191 (393)
T cd08246 123 RAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHL---SWE---EAAA-----YMLVGATAYRMLFGWNPNTV 191 (393)
T ss_pred ccccccccccccccccccCCCCcceeEEEechHHeEECCCCC---CHH---HHhh-----hcccHHHHHHHHhhcccccC
Confidence 567788899887777764 46899999999976655222211 000 0011 156899999998544 678
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcc---------------------
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP--------------------- 140 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~--------------------- 140 (192)
.+|++|+|+|++|++|++++++|+++|++++++++++++++.++ ++|+++++|+++++
T Consensus 192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (393)
T cd08246 192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEAR 270 (393)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccccccccccccchhhhhhhhccc
Confidence 89999999998899999999999999999999999999999999 89999999864320
Q ss_pred cHHHHHHhhccC--Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 141 DLDVALKRMFLC--WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 141 ~~~~~i~~~~~~--g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+.+.+++++ ++ |++|+..+..++++++++|+ +.+|...
T Consensus 271 ~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 318 (393)
T cd08246 271 RFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTT 318 (393)
T ss_pred hHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccC
Confidence 245666776654 44 89998889999999999995 5777644
No 43
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.74 E-value=5.3e-16 Score=125.41 Aligned_cols=167 Identities=25% Similarity=0.242 Sum_probs=129.1
Q ss_pred hhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcc------------cC--------CCcccccCCCCC--------
Q 029543 13 CKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSK------------LD--------TSLFYSFCPGGV-------- 64 (192)
Q Consensus 13 C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~------------~~--------~~~~~~~~~g~~-------- 64 (192)
-.++.....+.|...+++|+|++.++++++.+.....+ .. ++....+..|+.
T Consensus 13 ~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~ 92 (327)
T PRK10754 13 PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSAL 92 (327)
T ss_pred hhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCCCC
Confidence 34666667778888899999999999998844322110 00 111111111111
Q ss_pred -----------------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe
Q 029543 65 -----------------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA 115 (192)
Q Consensus 65 -----------------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 115 (192)
+++++++|+++.+..++.+|++|+|+|++|++|++++|+||.+|++|++++
T Consensus 93 g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~ 172 (327)
T PRK10754 93 GAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 172 (327)
T ss_pred cceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 456788888887777899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 116 GSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 116 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+++++.++++ ++|++.+++.++. ++.+.+++.+.+ ++ |++|+.....++++++++|+ +.+|..+
T Consensus 173 ~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 242 (327)
T PRK10754 173 GSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNAS 242 (327)
T ss_pred CCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCC
Confidence 9999999998 9999999988776 788888887765 55 89998888999999999995 5787654
No 44
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.74 E-value=4.6e-17 Score=134.84 Aligned_cols=172 Identities=20% Similarity=0.201 Sum_probs=128.9
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHH-hCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEI-CSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~-~~~~~ 83 (192)
|+.+..++|.+....|+..+|++++|+.++...+..-|.....++.. ..+.....+.+++|||+++... .++++
T Consensus 129 c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~-----~~~~~a~~~~~~~ta~~al~~~~~~~~~ 203 (384)
T cd08265 129 CRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSED-----KAFEAGALVEPTSVAYNGLFIRGGGFRP 203 (384)
T ss_pred hhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccC-----CCHHHhhhhhHHHHHHHHHHhhcCCCCC
Confidence 56778899999888887778999999999876554222211000000 0111112256889999998655 68999
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc--ccHHHHHHhhccC-Cc----c
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE--PDLDVALKRMFLC-WV----D 155 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~~-g~----d 155 (192)
|++|+|+| +|++|++++|+|+.+|+ +|++++++++|.+.++ ++|+++++++++. +++.+.+++.+.+ ++ |
T Consensus 204 g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld 281 (384)
T cd08265 204 GAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVE 281 (384)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEE
Confidence 99999997 79999999999999999 8999999999998888 9999999887631 1567778777765 55 8
Q ss_pred cccH--HHHHHHHHhhcCCCe-EEEeeCCCC
Q 029543 156 FVGI--EYCRSLLLVLLFRPL-KIMENDSGS 183 (192)
Q Consensus 156 ~~g~--~~~~~~~~~l~~~G~-v~~G~~~~~ 183 (192)
++|+ ..+..++++++++|+ +.+|.....
T Consensus 282 ~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~ 312 (384)
T cd08265 282 AAGAPPATIPQMEKSIAINGKIVYIGRAATT 312 (384)
T ss_pred CCCCcHHHHHHHHHHHHcCCEEEEECCCCCC
Confidence 8885 378899999999995 577765443
No 45
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.73 E-value=5.4e-17 Score=133.23 Aligned_cols=166 Identities=14% Similarity=0.129 Sum_probs=119.1
Q ss_pred cccchhhhhhhhcc-------ccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHH
Q 029543 5 IRNTSKRLCKIQNI-------LKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLY 76 (192)
Q Consensus 5 ~~~g~~~~C~~~~~-------~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~ 76 (192)
|+.|..++|.+... .|...+|+++||++++...+.. +|+.... ...++ ++++.|||+++.
T Consensus 106 c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~-------iP~~~~~~~aa~l-----~~~~~ta~~al~ 173 (357)
T PLN02514 106 CKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVK-------IPEGMAPEQAAPL-----LCAGVTVYSPLS 173 (357)
T ss_pred HhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEE-------CCCCCCHHHhhhh-----hhhHHHHHHHHH
Confidence 67888899987421 2334579999999999765552 2222100 11112 568899999996
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc-
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV- 154 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~- 154 (192)
+....++|++|+|+| +|++|++++|+||++|++|+++++++++++.+.+++|++.++++.++ +.+.+.+.+ .+
T Consensus 174 ~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~----~~~~~~~~~~D~v 248 (357)
T PLN02514 174 HFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA----AEMQEAADSLDYI 248 (357)
T ss_pred HcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh----HHHHHhcCCCcEE
Confidence 555567899999997 79999999999999999999999888877666547999988876532 233444332 22
Q ss_pred -ccccH-HHHHHHHHhhcCCCe-EEEeeCCCCCccc
Q 029543 155 -DFVGI-EYCRSLLLVLLFRPL-KIMENDSGSTPIP 187 (192)
Q Consensus 155 -d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~~~~~~ 187 (192)
|++|. ..++.++++++++|+ +.+|...+..+++
T Consensus 249 id~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~ 284 (357)
T PLN02514 249 IDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFV 284 (357)
T ss_pred EECCCchHHHHHHHHHhccCCEEEEECCCCCCCccc
Confidence 99994 688999999999995 6788765544443
No 46
>PRK10083 putative oxidoreductase; Provisional
Probab=99.73 E-value=8.1e-17 Score=130.85 Aligned_cols=161 Identities=16% Similarity=0.087 Sum_probs=122.7
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
|+.+++++|.+....+...+|++++|+.++...+. .+|.... +..+...+++.++++++ +..++++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~ip~~~~-----~~~a~~~~~~~~a~~~~-~~~~~~~g 161 (339)
T PRK10083 95 CSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAH-------RIPDAIA-----DQYAVMVEPFTIAANVT-GRTGPTEQ 161 (339)
T ss_pred ccCcCcccCCCCceEEEccCCcceeeEEechHHeE-------ECcCCCC-----HHHHhhhchHHHHHHHH-HhcCCCCC
Confidence 56788899988776666668999999999986655 2222211 00011145778888655 77889999
Q ss_pred CEEEEeCCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCC--c--cccc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKL-AGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCW--V--DFVG 158 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~-~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g--~--d~~g 158 (192)
++|+|+| +|++|++++|+|+. +|+ .+++++++++|.+.++ ++|++.+++++++ ++.+.+... +.+ + |++|
T Consensus 162 ~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~~~~~-g~~~d~vid~~g 237 (339)
T PRK10083 162 DVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-PLGEALEEK-GIKPTLIIDAAC 237 (339)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHHHhcC-CCCCCEEEECCC
Confidence 9999999 89999999999996 699 5888899999999999 9999999998765 677666432 113 2 8998
Q ss_pred -HHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 159 -IEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 159 -~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
...+..++++++++|+ +.+|....
T Consensus 238 ~~~~~~~~~~~l~~~G~~v~~g~~~~ 263 (339)
T PRK10083 238 HPSILEEAVTLASPAARIVLMGFSSE 263 (339)
T ss_pred CHHHHHHHHHHhhcCCEEEEEccCCC
Confidence 5689999999999995 67887543
No 47
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.72 E-value=2.5e-16 Score=130.03 Aligned_cols=165 Identities=15% Similarity=0.122 Sum_probs=123.0
Q ss_pred ccccchhhhhhhhcccc---------------------ccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCC
Q 029543 4 SIRNTSKRLCKIQNILK---------------------QNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCP 61 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g---------------------~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~ 61 (192)
.|++++.|.|++....+ +..+|++++|+.++...+. .+|+.... ....+
T Consensus 101 ~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~-------~lP~~l~~~~aa~~-- 171 (373)
T cd08299 101 ACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVA-------KIDAAAPLEKVCLI-- 171 (373)
T ss_pred hhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEeccccee-------eCCCCCChHHhhee--
Confidence 47788899998764321 0135889999999987766 33322100 01111
Q ss_pred CCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcc
Q 029543 62 GGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 140 (192)
Q Consensus 62 g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 140 (192)
.+++.|+|+++.+..++++|++|+|+| +|++|++++++|+++|+ +|+++++++++++.++ ++|+++++++.+..
T Consensus 172 ---~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~ 246 (373)
T cd08299 172 ---GCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK-ELGATECINPQDYK 246 (373)
T ss_pred ---ccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEecccccc
Confidence 558899999987778899999999997 79999999999999999 8999999999999998 99999999876431
Q ss_pred -cHHHHHHhhccCCc----ccccH-HHHHHHHHhhc-CCCe-EEEeeCCC
Q 029543 141 -DLDVALKRMFLCWV----DFVGI-EYCRSLLLVLL-FRPL-KIMENDSG 182 (192)
Q Consensus 141 -~~~~~i~~~~~~g~----d~~g~-~~~~~~~~~l~-~~G~-v~~G~~~~ 182 (192)
++.+.+++.+.+++ |++|+ ..+..++..++ ++|+ +.+|....
T Consensus 247 ~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~ 296 (373)
T cd08299 247 KPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296 (373)
T ss_pred hhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC
Confidence 36666666654444 89984 67788787664 6784 67887643
No 48
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.72 E-value=1.7e-16 Score=128.83 Aligned_cols=164 Identities=15% Similarity=0.173 Sum_probs=125.7
Q ss_pred ccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCC
Q 029543 6 RNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGE 85 (192)
Q Consensus 6 ~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~ 85 (192)
+.+..++|.+....|...+|.+++|+.++..++. .+|+... + ......+.+++|||+++ +..++++|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-------~~p~~~~-~---~~aa~l~~~~~ta~~~~-~~~~~~~g~ 164 (338)
T PRK09422 97 TTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAV-------KVPEGLD-P---AQASSITCAGVTTYKAI-KVSGIKPGQ 164 (338)
T ss_pred cCCCcccCCCccccCccccCcceeEEEEchHHeE-------eCCCCCC-H---HHeehhhcchhHHHHHH-HhcCCCCCC
Confidence 4567788888777777778999999999986554 2222100 0 00111256889999999 778899999
Q ss_pred EEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-C-c--ccccHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKL-AGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-W-V--DFVGIE 160 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~-~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g-~--d~~g~~ 160 (192)
+|+|+| +|++|++++|+|+. .|++|+++++++++.+.++ ++|++.++++++.+++.+.+++.+++ . + ++.+++
T Consensus 165 ~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~ 242 (338)
T PRK09422 165 WIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKA 242 (338)
T ss_pred EEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHH
Confidence 999999 79999999999998 4999999999999999998 99999999986522667777766553 2 2 555677
Q ss_pred HHHHHHHhhcCCCe-EEEeeCCCC
Q 029543 161 YCRSLLLVLLFRPL-KIMENDSGS 183 (192)
Q Consensus 161 ~~~~~~~~l~~~G~-v~~G~~~~~ 183 (192)
.+..++++++++|+ +.+|.....
T Consensus 243 ~~~~~~~~l~~~G~~v~~g~~~~~ 266 (338)
T PRK09422 243 AFNQAVDAVRAGGRVVAVGLPPES 266 (338)
T ss_pred HHHHHHHhccCCCEEEEEeeCCCC
Confidence 89999999999995 577865443
No 49
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.71 E-value=2.3e-15 Score=121.66 Aligned_cols=115 Identities=39% Similarity=0.530 Sum_probs=98.9
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.|||+++.+..++.+|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.+++.... ++.+
T Consensus 121 ~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~ 198 (329)
T cd08250 121 LVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGE 198 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHH
Confidence 6788899999977778999999999999999999999999999999999999999999998 8999999887765 6766
Q ss_pred HHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+....+.++ |++|+..+..++++++++|+ +.+|...
T Consensus 199 ~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 199 VLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred HHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEeccc
Confidence 6665543344 89998899999999999994 6777654
No 50
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.71 E-value=2.7e-16 Score=130.82 Aligned_cols=166 Identities=17% Similarity=0.157 Sum_probs=123.1
Q ss_pred cccchhhhhhhhccccc-cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHH--HhCC
Q 029543 5 IRNTSKRLCKIQNILKQ-NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYE--ICSP 81 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~-~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~--~~~~ 81 (192)
|+.+..++|......|. ...|++++|++++..++..-|... +.. ......+++.|||+++.. ..++
T Consensus 119 ~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l---~~~--------~aa~~~~~~~ta~~al~~~~~~~~ 187 (398)
T TIGR01751 119 GRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHL---TWE--------EAACPGLTGATAYRQLVGWNPATV 187 (398)
T ss_pred hccCccccccccccccccCCCccceEEEEechHHeEECCCCC---CHH--------HHhhccchHHHHHHHHhhhhccCC
Confidence 55667778876555553 246888999999976655222110 000 001115688999999854 4678
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcc---------------------
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP--------------------- 140 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~--------------------- 140 (192)
.+|++|+|+|++|++|++++|+|+++|++++++++++++.+.++ ++|++.++|+++++
T Consensus 188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (398)
T TIGR01751 188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFK 266 (398)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEecCCCcchhhccccccccccchhhhcch
Confidence 89999999998899999999999999999999999999999999 89999999875420
Q ss_pred cHHHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 141 DLDVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 141 ~~~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
.+.+.+.+.+.+ ++ |++|...+..++++++++|+ +.+|..++
T Consensus 267 ~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 267 RFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred hHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccC
Confidence 134456666654 55 89998889999999999994 67887543
No 51
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.70 E-value=4.5e-16 Score=127.26 Aligned_cols=163 Identities=18% Similarity=0.099 Sum_probs=121.8
Q ss_pred cccchhhhhhhhc---cccccCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHh
Q 029543 5 IRNTSKRLCKIQN---ILKQNAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEIC 79 (192)
Q Consensus 5 ~~~g~~~~C~~~~---~~g~~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~ 79 (192)
|+.|..++|.+.. ..+...+|++++|+.++.. .+. .+|..... ......++++.|+|+++ +..
T Consensus 95 c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~-------~lP~~~~~----~~aa~~~~~~~ta~~~~-~~~ 162 (351)
T cd08285 95 AQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLA-------PLPDGLTD----EQAVMLPDMMSTGFHGA-ELA 162 (351)
T ss_pred HHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceE-------ECCCCCCH----HHhhhhccchhhHHHHH-Hcc
Confidence 4566777777642 1123357889999999863 333 22221000 00011145889999997 677
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc---
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV--- 154 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~--- 154 (192)
++++|++|+|+| +|++|++++|+||++|+ .|+++++++++.+.++ ++|++.++++.+. ++.+.+.+.+.+ ++
T Consensus 163 ~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~v 239 (351)
T cd08285 163 NIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKNG-DVVEQILKLTGGKGVDAV 239 (351)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCCC-CHHHHHHHHhCCCCCcEE
Confidence 899999999997 79999999999999999 6999999999999999 9999999998876 788888776654 55
Q ss_pred -ccccH-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 155 -DFVGI-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 155 -d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
|++|+ ..+..++++++++|+ +.+|....
T Consensus 240 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 240 IIAGGGQDTFEQALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence 89985 588999999999995 57787654
No 52
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.70 E-value=4.9e-15 Score=118.80 Aligned_cols=113 Identities=19% Similarity=0.219 Sum_probs=97.4
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.|||+++.+..++.+|++|+|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++++++. .+ ++.+
T Consensus 124 ~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~ 200 (320)
T cd08243 124 PETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAE 200 (320)
T ss_pred chHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHH
Confidence 6788999999977778899999999999999999999999999999999999999999998 9999888764 44 6777
Q ss_pred HHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+++. +.++ |++|+..+..++++++++|+ +.+|...
T Consensus 201 ~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 241 (320)
T cd08243 201 QLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241 (320)
T ss_pred HHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCC
Confidence 77766 3355 89998899999999999995 5777643
No 53
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.70 E-value=4.1e-15 Score=120.14 Aligned_cols=115 Identities=26% Similarity=0.240 Sum_probs=99.2
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCccc-HH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD-LD 143 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~ 143 (192)
++++.|||+++.+..++.+|++|+|+|++|++|++++++|++.|++++.+++++++.++++ ++|++.++++... + +.
T Consensus 122 ~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 199 (334)
T PTZ00354 122 PEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFA 199 (334)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHH
Confidence 5677899999877788999999999999999999999999999998888999999999998 8999999988765 4 77
Q ss_pred HHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 144 VALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 144 ~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+.+++.+++ ++ |++|+..+..++++++++|+ +.+|...
T Consensus 200 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~ 243 (334)
T PTZ00354 200 PKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMG 243 (334)
T ss_pred HHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCC
Confidence 777777654 55 88898899999999999994 6777543
No 54
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.70 E-value=5.2e-16 Score=126.08 Aligned_cols=161 Identities=17% Similarity=0.179 Sum_probs=125.5
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHH-hCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEI-CSPK 82 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~-~~~~ 82 (192)
|+.|..++|++.+..|...+|.+++|+.++..++.. +|..... ....+ ++.+.|||+++.+. ..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-------~P~~ls~~~aa~l-----~~~~~ta~~~l~~~~~~~~ 166 (340)
T cd05284 99 CRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVK-------LPRGLDPVEAAPL-----ADAGLTAYHAVKKALPYLD 166 (340)
T ss_pred HhCcCcccCCCCcccCccCCCcceeeEEecHHHeEE-------CCCCCCHHHhhhh-----cchHHHHHHHHHHhcccCC
Confidence 445667889998888887889999999998876552 2221100 11112 56889999999665 4678
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DF 156 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~ 156 (192)
++++|+|+| +|++|++++|+|+..| ++|+++++++++.+.++ ++|+++++++++ ++.+.+++.+.+ ++ |+
T Consensus 167 ~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~~dvvld~ 242 (340)
T cd05284 167 PGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD--DVVEEVRELTGGRGADAVIDF 242 (340)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc--cHHHHHHHHhCCCCCCEEEEc
Confidence 899999999 6779999999999999 69999999999999998 999999998775 366777776654 55 89
Q ss_pred ccH-HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 157 VGI-EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 157 ~g~-~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+|+ ...+.++++++++|+ +.+|..+
T Consensus 243 ~g~~~~~~~~~~~l~~~g~~i~~g~~~ 269 (340)
T cd05284 243 VGSDETLALAAKLLAKGGRYVIVGYGG 269 (340)
T ss_pred CCCHHHHHHHHHHhhcCCEEEEEcCCC
Confidence 994 788999999999995 5777554
No 55
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.69 E-value=7.5e-16 Score=125.89 Aligned_cols=163 Identities=15% Similarity=0.086 Sum_probs=122.8
Q ss_pred cccchhhhhhhhccccc--cCCCCCCCeEEEEEEE-eeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCC
Q 029543 5 IRNTSKRLCKIQNILKQ--NAAEGSKDTVLLKNLY-LSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSP 81 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~--~~~g~~~~~vlv~~~~-~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~ 81 (192)
|+.+..+.|......|. ..+|.+++|+.++... +.. +|.... +..+....+++|+|+++ +..++
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~-------lP~~~~-----~~~aa~~~~~~ta~~a~-~~~~~ 172 (350)
T cd08256 106 CNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHK-------VPDDIP-----PEDAILIEPLACALHAV-DRANI 172 (350)
T ss_pred HhCcCcccCcCccceeeccCCCCcceeeEEcccccceEE-------CCCCCC-----HHHHhhhhHHHHHHHHH-HhcCC
Confidence 56777788876655454 2578999999998763 332 221100 00011124888999998 77899
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----c
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----D 155 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d 155 (192)
.+|++|+|.| +|++|++++|+|+++|+ .++++++++++.+.++ ++|++.+++++.. ++.+.+.+.+++ ++ |
T Consensus 173 ~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~vdvvld 249 (350)
T cd08256 173 KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGADVVLNPPEV-DVVEKIKELTGGYGCDIYIE 249 (350)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCCCEEEE
Confidence 9999999966 79999999999999998 6888898999999888 9999999988766 788888877664 55 8
Q ss_pred ccc-HHHHHHHHHhhcCCCe-EEEeeCCCC
Q 029543 156 FVG-IEYCRSLLLVLLFRPL-KIMENDSGS 183 (192)
Q Consensus 156 ~~g-~~~~~~~~~~l~~~G~-v~~G~~~~~ 183 (192)
++| ...+..++++++++|+ +.+|.....
T Consensus 250 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 279 (350)
T cd08256 250 ATGHPSAVEQGLNMIRKLGRFVEFSVFGDP 279 (350)
T ss_pred CCCChHHHHHHHHHhhcCCEEEEEccCCCC
Confidence 888 4688899999999995 577765443
No 56
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.68 E-value=1.2e-15 Score=125.61 Aligned_cols=143 Identities=20% Similarity=0.198 Sum_probs=113.8
Q ss_pred CCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHH
Q 029543 24 AEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQF 103 (192)
Q Consensus 24 ~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~ 103 (192)
+|++++|++++..++..-|... +.. ...++ ++++.||+.++.+...+++|++|+|+| +|++|++++|+
T Consensus 138 ~g~~~~y~~v~~~~~~~iP~~~---s~~---~a~~l-----~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~l 205 (365)
T cd08278 138 QSSFATYAVVHERNVVKVDKDV---PLE---LLAPL-----GCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMA 205 (365)
T ss_pred ccceeeEEEecchhEEECCCCC---CHH---Hhhhh-----cchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHH
Confidence 5788999999987766322211 000 11112 668899999987778899999999997 79999999999
Q ss_pred HHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----cccc-HHHHHHHHHhhcCCCe-EE
Q 029543 104 AKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVG-IEYCRSLLLVLLFRPL-KI 176 (192)
Q Consensus 104 a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g-~~~~~~~~~~l~~~G~-v~ 176 (192)
|++.|+ +|++++++++|.+.++ ++|++.+++++++ ++.+.+.+.++.++ |++| ...+..++++++++|+ +.
T Consensus 206 a~~~G~~~v~~~~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~ 283 (365)
T cd08278 206 AKIAGCTTIIAVDIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLAL 283 (365)
T ss_pred HHHcCCCeEEEEeCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEE
Confidence 999999 6999999999999998 9999999998876 78887877763355 8998 4688999999999995 57
Q ss_pred EeeC
Q 029543 177 MEND 180 (192)
Q Consensus 177 ~G~~ 180 (192)
+|..
T Consensus 284 ~g~~ 287 (365)
T cd08278 284 VGAP 287 (365)
T ss_pred eCcC
Confidence 7765
No 57
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.68 E-value=7.3e-15 Score=119.11 Aligned_cols=111 Identities=17% Similarity=0.272 Sum_probs=93.5
Q ss_pred chhHHHHHHHHHHHhCCCC-----CCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCC
Q 029543 65 IMPSVTAFAGLYEICSPKK-----GEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLLKNKFGFDDAFNYKE 138 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~-----g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~ 138 (192)
++++.|||+++.+..++.+ |++|+|+|++|++|++++|+||.+ |++|+++++++++.+.++ ++|+++++++..
T Consensus 125 ~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~ 203 (336)
T TIGR02817 125 PLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK 203 (336)
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC
Confidence 6778899999877778877 999999999999999999999998 999999999999999998 999999998653
Q ss_pred cccHHHHHHhhccCCc----cccc-HHHHHHHHHhhcCCCe-EEEe
Q 029543 139 EPDLDVALKRMFLCWV----DFVG-IEYCRSLLLVLLFRPL-KIME 178 (192)
Q Consensus 139 ~~~~~~~i~~~~~~g~----d~~g-~~~~~~~~~~l~~~G~-v~~G 178 (192)
++.+.+++....++ |+++ +.....++++++++|+ +.++
T Consensus 204 --~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~ 247 (336)
T TIGR02817 204 --PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALID 247 (336)
T ss_pred --CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEc
Confidence 67777776543345 7765 5788999999999995 4554
No 58
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.68 E-value=1.6e-15 Score=123.65 Aligned_cols=164 Identities=23% Similarity=0.229 Sum_probs=125.8
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPK 82 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~ 82 (192)
+..|..|+|.+....+...+|++++|++++.. ++.. +|...... .....+++++|||+++.+..++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~-------iP~~~~~~----~aa~l~~~~~ta~~~l~~~~~~~ 164 (345)
T cd08260 96 CRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVR-------LPDDVDFV----TAAGLGCRFATAFRALVHQARVK 164 (345)
T ss_pred ccCcCcccCCCCcccccCCCCcceeEEEcccccCceEE-------CCCCCCHH----HhhhhccchHHHHHHHHHccCCC
Confidence 45677788888655555557899999999863 4432 22210000 00111558899999987778899
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCC-cccHHHHHHhhccCCc----ccc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLDVALKRMFLCWV----DFV 157 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~~g~----d~~ 157 (192)
++++|+|+| +|++|++++|+|+..|++|+++++++++.+.++ ++|++.+++++. . ++.+.+.+...+++ |++
T Consensus 165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~~~~~~~~~~~d~vi~~~ 241 (345)
T cd08260 165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE-DVAAAVRDLTGGGAHVSVDAL 241 (345)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch-hHHHHHHHHhCCCCCEEEEcC
Confidence 999999999 799999999999999999999999999999998 899999999886 5 77777776654444 888
Q ss_pred c-HHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 158 G-IEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 158 g-~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
| ......++++++++|+ +.+|....
T Consensus 242 g~~~~~~~~~~~l~~~g~~i~~g~~~~ 268 (345)
T cd08260 242 GIPETCRNSVASLRKRGRHVQVGLTLG 268 (345)
T ss_pred CCHHHHHHHHHHhhcCCEEEEeCCcCC
Confidence 8 5688899999999995 57776543
No 59
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.68 E-value=6.8e-15 Score=118.41 Aligned_cols=116 Identities=29% Similarity=0.277 Sum_probs=100.0
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
+++++++|+++.+...+.+|++|+|+|++|++|++++|+|+++|++++++++++++.+.++ ++|++.++++.+. ++.+
T Consensus 120 ~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 197 (323)
T cd05282 120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQ 197 (323)
T ss_pred hccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHH
Confidence 4578889999877778899999999998899999999999999999999999999999998 9999999998765 7777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
.+.+.+.+ ++ |++|+......+++++++|+ +.+|....
T Consensus 198 ~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~ 241 (323)
T cd05282 198 RVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSG 241 (323)
T ss_pred HHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCC
Confidence 78777665 55 89998878889999999995 56776543
No 60
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.68 E-value=1e-15 Score=124.56 Aligned_cols=165 Identities=18% Similarity=0.209 Sum_probs=124.2
Q ss_pred ccccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 4 SIRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 4 ~~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
.|+.++.|+|++.+..+...+|.+++++.++...+..-| .... +..+....++.++++++.. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP-------~~l~-----~~~~~~~~~~~~~~~~~~~--~~~~ 163 (341)
T PRK05396 98 NCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIP-------DDIP-----DDLAAIFDPFGNAVHTALS--FDLV 163 (341)
T ss_pred hhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECc-------CCCC-----HHHhHhhhHHHHHHHHHHc--CCCC
Confidence 467788899998777777778999999999987655222 2100 0011113466667666532 3458
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccc
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFV 157 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~ 157 (192)
|++|+|.| +|++|++++|+|+++|+ +|+++++++++.++++ ++|++.++++++. ++.+.+++.+.+ ++ |++
T Consensus 164 g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~~~~~~~~~~~~~d~v~d~~ 240 (341)
T PRK05396 164 GEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-DLRDVMAELGMTEGFDVGLEMS 240 (341)
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHHHHHhcCCCCCCEEEECC
Confidence 99999987 79999999999999999 7888888999999998 9999999998876 788888877654 55 888
Q ss_pred c-HHHHHHHHHhhcCCCe-EEEeeCCCCCc
Q 029543 158 G-IEYCRSLLLVLLFRPL-KIMENDSGSTP 185 (192)
Q Consensus 158 g-~~~~~~~~~~l~~~G~-v~~G~~~~~~~ 185 (192)
| ...++.++++++++|+ +.+|..+...+
T Consensus 241 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 270 (341)
T PRK05396 241 GAPSAFRQMLDNMNHGGRIAMLGIPPGDMA 270 (341)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEecCCCCCc
Confidence 7 4688999999999995 67776554333
No 61
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.67 E-value=1.7e-15 Score=123.41 Aligned_cols=171 Identities=15% Similarity=0.091 Sum_probs=125.2
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCCccccc-CCCCCchhHHHHHHHHHHHhCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTSLFYSF-CPGGVIMPSVTAFAGLYEICSP 81 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~~~~~~-~~g~~~~~~~ta~~~l~~~~~~ 81 (192)
++.+..+.|.+....+...+|++++|+.++.. .+. .+|+........+ ......++++|||+++ +..++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-------~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~ 166 (345)
T cd08287 95 CRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLV-------KVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGV 166 (345)
T ss_pred hhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceE-------ECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCC
Confidence 34566677777666777788999999999873 333 2222100000000 0000125788999998 57789
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----c
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----D 155 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d 155 (192)
.+|++|+|.| +|++|++++|+|+++|+ .++++++++++.+.++ ++|++.++++.+. ++.+.+.+.+++ ++ |
T Consensus 167 ~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~-~~~~~i~~~~~~~~~d~il~ 243 (345)
T cd08287 167 RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAERGE-EAVARVRELTGGVGADAVLE 243 (345)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCCcc-cHHHHHHHhcCCCCCCEEEE
Confidence 9999999987 89999999999999999 5889988888999888 9999999999876 788888877654 55 8
Q ss_pred ccc-HHHHHHHHHhhcCCCe-EEEeeCCCCCcc
Q 029543 156 FVG-IEYCRSLLLVLLFRPL-KIMENDSGSTPI 186 (192)
Q Consensus 156 ~~g-~~~~~~~~~~l~~~G~-v~~G~~~~~~~~ 186 (192)
++| ...++.++++++++|+ +.+|...+..++
T Consensus 244 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~ 276 (345)
T cd08287 244 CVGTQESMEQAIAIARPGGRVGYVGVPHGGVEL 276 (345)
T ss_pred CCCCHHHHHHHHHhhccCCEEEEecccCCCCcc
Confidence 887 4688999999999995 566765433333
No 62
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.67 E-value=1.7e-15 Score=124.69 Aligned_cols=163 Identities=15% Similarity=0.101 Sum_probs=120.8
Q ss_pred cccchhhhhhhhccccc---------------------cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCC
Q 029543 5 IRNTSKRLCKIQNILKQ---------------------NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPG 62 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~---------------------~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g 62 (192)
|+.+.++.|.....++. ...|++++|++++...+.. +|..... ....+
T Consensus 95 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-------lP~~~~~~~a~~~--- 164 (365)
T cd05279 95 CLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAK-------IDPDAPLEKVCLI--- 164 (365)
T ss_pred hcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEE-------CCCCCCHHHhhHh---
Confidence 45677778876554421 1246889999999876652 2222100 01111
Q ss_pred CCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcc-
Q 029543 63 GVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP- 140 (192)
Q Consensus 63 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~- 140 (192)
.++++++|+++.+.+++.+|++|+|+| +|++|++++|+|+.+|+ .|+++++++++.+.++ ++|+++++++++.+
T Consensus 165 --~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~~~ 240 (365)
T cd05279 165 --GCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK-QLGATECINPRDQDK 240 (365)
T ss_pred --ccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCeecccccccc
Confidence 458899999987788899999999997 79999999999999999 5888888999999998 99999999876531
Q ss_pred cHHHHHHhhccCCc----cccc-HHHHHHHHHhhc-CCCe-EEEeeCC
Q 029543 141 DLDVALKRMFLCWV----DFVG-IEYCRSLLLVLL-FRPL-KIMENDS 181 (192)
Q Consensus 141 ~~~~~i~~~~~~g~----d~~g-~~~~~~~~~~l~-~~G~-v~~G~~~ 181 (192)
++.+.+++.+++++ |++| ...+..++++++ ++|+ +.+|...
T Consensus 241 ~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 288 (365)
T cd05279 241 PIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPP 288 (365)
T ss_pred hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCC
Confidence 45666776664455 8888 478899999999 9995 5677653
No 63
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.67 E-value=2.3e-15 Score=122.49 Aligned_cols=160 Identities=18% Similarity=0.172 Sum_probs=123.4
Q ss_pred cchhhhhhhhccccccCCCCCCCeEEEEEEE-----eeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCC
Q 029543 7 NTSKRLCKIQNILKQNAAEGSKDTVLLKNLY-----LSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSP 81 (192)
Q Consensus 7 ~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~-----~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~ 81 (192)
.+..++|......|...+|.+++|+.++..+ +. .+|... ++..+...+++.+||+++. ..++
T Consensus 97 ~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~-------~lP~~~-----~~~~aa~~~~~~~a~~~l~-~~~~ 163 (343)
T cd08235 97 RGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVL-------KLPDNV-----SFEEAALVEPLACCINAQR-KAGI 163 (343)
T ss_pred CcCcccCCCcceeccCCCCcceeeEEecccccccccEE-------ECCCCC-----CHHHHHhhhHHHHHHHHHH-hcCC
Confidence 3446677777777777789999999999875 33 222210 0111111347889999994 4589
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----c
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----D 155 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d 155 (192)
.+|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++ ++|.++++++++. ++.+.+++.+.+ ++ |
T Consensus 164 ~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~vd~vld 240 (343)
T cd08235 164 KPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE-DLVEKVRELTDGRGADVVIV 240 (343)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-CHHHHHHHHhCCcCCCEEEE
Confidence 9999999997 799999999999999998 999999999999998 9999999998877 888888777655 55 8
Q ss_pred cccH-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 156 FVGI-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 156 ~~g~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
++|+ ..+..++++++++|+ +.+|....
T Consensus 241 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~~ 269 (343)
T cd08235 241 ATGSPEAQAQALELVRKGGRILFFGGLPK 269 (343)
T ss_pred CCCChHHHHHHHHHhhcCCEEEEEeccCC
Confidence 8884 588899999999995 57776543
No 64
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.67 E-value=1.2e-15 Score=124.33 Aligned_cols=162 Identities=15% Similarity=0.162 Sum_probs=120.1
Q ss_pred cccchhhhhhhhcccc-ccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 5 IRNTSKRLCKIQNILK-QNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g-~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
|+.|.+++|.+....+ ...+|.+++|+.++..++. .+|... ++..+....++.+|++++ +..++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-------~lP~~~-----~~~~aa~~~~~~~a~~~~-~~~~~~~ 162 (343)
T cd05285 96 CKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCH-------KLPDNV-----SLEEGALVEPLSVGVHAC-RRAGVRP 162 (343)
T ss_pred HhCcCcccCcCccccccccCCCceeeeEEecHHHcE-------ECcCCC-----CHHHhhhhhHHHHHHHHH-HhcCCCC
Confidence 4456677777654322 1246888999999876554 222211 010111134778999998 7889999
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccH---HHHHHhhccC-Cc----
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL---DVALKRMFLC-WV---- 154 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~---~~~i~~~~~~-g~---- 154 (192)
|++|+|.| +|++|.+++|+||.+|++ |+++++++++.+.++ ++|++.+++++++ ++ .+.+.+.+.+ ++
T Consensus 163 g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~d~vl 239 (343)
T cd05285 163 GDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPESAEKIAELLGGKGPDVVI 239 (343)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhHHHHHHHHhCCCCCCEEE
Confidence 99999987 799999999999999996 999999999999998 8999999998765 53 6677766654 45
Q ss_pred ccccHH-HHHHHHHhhcCCCe-EEEeeCCC
Q 029543 155 DFVGIE-YCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 155 d~~g~~-~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
|++|+. .++.++++++++|+ +.+|....
T Consensus 240 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 269 (343)
T cd05285 240 ECTGAESCIQTAIYATRPGGTVVLVGMGKP 269 (343)
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEEccCCC
Confidence 888865 88999999999995 56775443
No 65
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.66 E-value=1.5e-14 Score=117.57 Aligned_cols=115 Identities=24% Similarity=0.189 Sum_probs=94.2
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHhcCCCeeeecCCc-
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK----EKVDLLKNKFGFDDAFNYKEE- 139 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~----~~~~~~~~~~g~~~vi~~~~~- 139 (192)
+++++|+|+++.....+.+|++|+|+|++|++|++++|+|++.|++++++++++ ++.+.++ ++|+++++++++.
T Consensus 128 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~ 206 (341)
T cd08290 128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELR 206 (341)
T ss_pred hccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccc
Confidence 467889999997667889999999999899999999999999999998888776 6788888 8999999987641
Q ss_pred -ccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 140 -PDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 140 -~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
.++.+.++...++++ |++|+..+...+++++++|+ +.+|..
T Consensus 207 ~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~ 253 (341)
T cd08290 207 SLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGM 253 (341)
T ss_pred cccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEecc
Confidence 045666666554333 99998888889999999995 577754
No 66
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.66 E-value=3e-15 Score=121.59 Aligned_cols=159 Identities=17% Similarity=0.211 Sum_probs=121.9
Q ss_pred ccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCC
Q 029543 6 RNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGE 85 (192)
Q Consensus 6 ~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~ 85 (192)
+.++.|.|.+...++...+|.+++|+.++.. +..-| +... +.......+++++++++ ...++.+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p-------~~~~-----~~~aa~~~~~~~a~~~~-~~~~l~~g~ 161 (337)
T cd08261 96 RKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVP-------EGLS-----LDQAALVEPLAIGAHAV-RRAGVTAGD 161 (337)
T ss_pred hCcCcccCCCCCeeeecCCCcceeEEEechh-eEECC-------CCCC-----HHHhhhhchHHHHHHHH-HhcCCCCCC
Confidence 4456677765555555557899999999988 65322 2110 00000123677888888 778899999
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccH-
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGI- 159 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~- 159 (192)
+|||+| +|++|.+++|+|+.+|++|+++++++++.++++ ++|+++++++++. ++.+.+.+.+++ ++ |++|+
T Consensus 162 ~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~ 238 (337)
T cd08261 162 TVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-DVAARLRELTDGEGADVVIDATGNP 238 (337)
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-CHHHHHHHHhCCCCCCEEEECCCCH
Confidence 999997 799999999999999999999999999999998 9999999998877 788888777654 45 88874
Q ss_pred HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 160 EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
..+..++++++++|+ +.+|...
T Consensus 239 ~~~~~~~~~l~~~G~~i~~g~~~ 261 (337)
T cd08261 239 ASMEEAVELVAHGGRVVLVGLSK 261 (337)
T ss_pred HHHHHHHHHHhcCCEEEEEcCCC
Confidence 688899999999995 5666554
No 67
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.66 E-value=7e-15 Score=119.79 Aligned_cols=177 Identities=23% Similarity=0.228 Sum_probs=130.1
Q ss_pred CccccccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhh--------c---ccC--------CCcccccCC
Q 029543 1 MDTSIRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRM--------S---KLD--------TSLFYSFCP 61 (192)
Q Consensus 1 ~~~~~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~--------~---~~~--------~~~~~~~~~ 61 (192)
|++.+.++.. +..++....+.|....++|+|++.++++|+.+.... + +.. ++....+..
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG--GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC--CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 5555554432 555666677778888999999999999988543211 0 000 111111111
Q ss_pred C------------------C--------------------------CchhHHHHHHHHHHHhCC----------CCCCEE
Q 029543 62 G------------------G--------------------------VIMPSVTAFAGLYEICSP----------KKGEYV 87 (192)
Q Consensus 62 g------------------~--------------------------~~~~~~ta~~~l~~~~~~----------~~g~~V 87 (192)
| . .++++.|||+++.+..++ .++++|
T Consensus 79 Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~v 158 (339)
T cd08249 79 GDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPV 158 (339)
T ss_pred CCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEE
Confidence 1 1 055789999998665544 789999
Q ss_pred EEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccH-HHH
Q 029543 88 YVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGI-EYC 162 (192)
Q Consensus 88 lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~-~~~ 162 (192)
+|+|++|++|++++|+|+++|++|+.++ ++++.+.++ ++|+++++++++. ++.+.+++.+++++ |++|+ ..+
T Consensus 159 lI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~ 235 (339)
T cd08249 159 LIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGKLRYALDCISTPESA 235 (339)
T ss_pred EEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCCeeEEEEeeccchHH
Confidence 9999989999999999999999999888 568899998 8999999998876 78888877665455 88887 899
Q ss_pred HHHHHhhcC--CCe-EEEeeCCC
Q 029543 163 RSLLLVLLF--RPL-KIMENDSG 182 (192)
Q Consensus 163 ~~~~~~l~~--~G~-v~~G~~~~ 182 (192)
..+++++++ +|+ +.+|....
T Consensus 236 ~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 236 QLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred HHHHHHHhccCCCEEEEecCCCc
Confidence 999999999 884 67776543
No 68
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.66 E-value=2.4e-15 Score=122.90 Aligned_cols=163 Identities=17% Similarity=0.147 Sum_probs=121.8
Q ss_pred cchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCE
Q 029543 7 NTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEY 86 (192)
Q Consensus 7 ~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~ 86 (192)
.++.+.|.+....|....|.+++++.++...+..-|...... ....+ .++++|||+++.+...+.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~------~aa~l-----~~~~~tA~~~~~~~~~~~~~~~ 178 (350)
T cd08240 110 AGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPA------LAATL-----ACSGLTAYSAVKKLMPLVADEP 178 (350)
T ss_pred CcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHH------Heehh-----hchhhhHHHHHHhcccCCCCCE
Confidence 455666666554554467888999999886554322211000 01111 5688999999976666668999
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----cccc-HH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVG-IE 160 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g-~~ 160 (192)
|+|+| +|++|++++|+||..|+ +|+++++++++.+.++ ++|++.++++++. ++.+.+.+..++++ |++| ..
T Consensus 179 vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~ 255 (350)
T cd08240 179 VVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSA 255 (350)
T ss_pred EEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecCCCc-cHHHHHHHHhCCCCcEEEECCCCHH
Confidence 99997 79999999999999999 7999999999999998 9999999988766 67777776654344 8998 57
Q ss_pred HHHHHHHhhcCCCe-EEEeeCCCC
Q 029543 161 YCRSLLLVLLFRPL-KIMENDSGS 183 (192)
Q Consensus 161 ~~~~~~~~l~~~G~-v~~G~~~~~ 183 (192)
.+..++++|+++|+ +.+|..+..
T Consensus 256 ~~~~~~~~l~~~g~~v~~g~~~~~ 279 (350)
T cd08240 256 TASLAFDILAKGGKLVLVGLFGGE 279 (350)
T ss_pred HHHHHHHHhhcCCeEEEECCCCCC
Confidence 89999999999995 567765543
No 69
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.66 E-value=4.2e-15 Score=120.87 Aligned_cols=161 Identities=21% Similarity=0.187 Sum_probs=124.7
Q ss_pred cchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCE
Q 029543 7 NTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEY 86 (192)
Q Consensus 7 ~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~ 86 (192)
.++.+.|.+....|...+|.+++++.++...+..-|.. ++.. ....+ +.++.|||+++.. .++.++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~---~~~~---~~a~l-----~~~~~ta~~~~~~-~~~~~~~~ 168 (341)
T cd08297 101 TGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDG---LSFE---QAAPL-----LCAGVTVYKALKK-AGLKPGDW 168 (341)
T ss_pred CCCcccCCCccccccccCCcceeEEEeccccEEECCCC---CCHH---HHHHH-----HcchHHHHHHHHh-cCCCCCCE
Confidence 34566777766667767889999999998776632211 0000 01112 5588999999854 58999999
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc-HH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG-IE 160 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g-~~ 160 (192)
|+|+|+++++|++++++|+++|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+++ ++ |+.+ +.
T Consensus 169 vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~ 246 (341)
T cd08297 169 VVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS-DDVEAVKELTGGGGAHAVVVTAVSAA 246 (341)
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-cHHHHHHHHhcCCCCCEEEEcCCchH
Confidence 999998888999999999999999999999999999998 9999999998876 788888877654 55 5555 67
Q ss_pred HHHHHHHhhcCCCe-EEEeeCC
Q 029543 161 YCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 161 ~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
....++++++++|+ +.+|..+
T Consensus 247 ~~~~~~~~l~~~g~~v~~g~~~ 268 (341)
T cd08297 247 AYEQALDYLRPGGTLVCVGLPP 268 (341)
T ss_pred HHHHHHHHhhcCCEEEEecCCC
Confidence 88999999999995 5777654
No 70
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.65 E-value=2.6e-15 Score=121.72 Aligned_cols=160 Identities=21% Similarity=0.134 Sum_probs=122.9
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
|+.+.++.|.+...+|...+|.+++|+.++...+..-|..... . ....+ .++++++|+++.+. ++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~---~---~~a~l-----~~~~~~a~~~~~~~-~~~~~ 163 (334)
T PRK13771 96 CRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSD---E---GAVIV-----PCVTGMVYRGLRRA-GVKKG 163 (334)
T ss_pred hcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCH---H---Hhhcc-----cchHHHHHHHHHhc-CCCCC
Confidence 5677888999888888777899999999998765522211100 0 01111 56889999999555 88999
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc--ccccHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV--DFVGIEY 161 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~--d~~g~~~ 161 (192)
++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++ ++.+++++ ++.+.+++. ++ .+ |++|+..
T Consensus 164 ~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~v~~~-~~~d~~ld~~g~~~ 237 (334)
T PRK13771 164 ETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KFSEEVKKI-GGADIVIETVGTPT 237 (334)
T ss_pred CEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hHHHHHHhc-CCCcEEEEcCChHH
Confidence 99999998899999999999999999999999999999998 88 77777664 345555554 22 22 9999888
Q ss_pred HHHHHHhhcCCCe-EEEeeCCC
Q 029543 162 CRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 162 ~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
...++++++++|+ +.+|....
T Consensus 238 ~~~~~~~l~~~G~~v~~g~~~~ 259 (334)
T PRK13771 238 LEESLRSLNMGGKIIQIGNVDP 259 (334)
T ss_pred HHHHHHHHhcCCEEEEEeccCC
Confidence 9999999999995 67887543
No 71
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.65 E-value=3.5e-15 Score=124.69 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=83.5
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHhc--------CCC-eeeecCCcccHHH
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC---HVVGSAGSKEKVDLLKNKF--------GFD-DAFNYKEEPDLDV 144 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~~~~~~~~~~~~--------g~~-~vi~~~~~~~~~~ 144 (192)
+..++++|++|+|+|++|++|++++|+||++|+ +|++++++++|++.++ ++ |++ .++|+++.+++.+
T Consensus 169 ~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~ 247 (410)
T cd08238 169 HRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHA 247 (410)
T ss_pred hhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHH
Confidence 456788999999999899999999999999754 8999999999999999 76 776 5787764227888
Q ss_pred HHHhhccC-Cc----cccc-HHHHHHHHHhhcCCC-eEEEee
Q 029543 145 ALKRMFLC-WV----DFVG-IEYCRSLLLVLLFRP-LKIMEN 179 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g-~~~~~~~~~~l~~~G-~v~~G~ 179 (192)
.+++.+++ ++ |++| ...++.++++++++| +++++.
T Consensus 248 ~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g 289 (410)
T cd08238 248 TLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAG 289 (410)
T ss_pred HHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEc
Confidence 88887765 55 7887 578999999999998 455543
No 72
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.64 E-value=7.2e-16 Score=108.79 Aligned_cols=92 Identities=23% Similarity=0.315 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc-HHHHHHHHHh
Q 029543 95 AVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG-IEYCRSLLLV 168 (192)
Q Consensus 95 ~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g-~~~~~~~~~~ 168 (192)
|+|++++|+||+.|++|++++++++|++.++ ++|+++++|+++. ++.+++++++++ ++ ||+| .+.++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 9999999999988 899999999987 66 9999 7899999999
Q ss_pred hcCCCe-EEEeeCC-CCCcccc
Q 029543 169 LLFRPL-KIMENDS-GSTPIPF 188 (192)
Q Consensus 169 l~~~G~-v~~G~~~-~~~~~~~ 188 (192)
++++|+ +++|..+ ...+++.
T Consensus 79 l~~~G~~v~vg~~~~~~~~~~~ 100 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGGDPISFNL 100 (130)
T ss_dssp EEEEEEEEEESSTSTSEEEEEH
T ss_pred hccCCEEEEEEccCCCCCCCCH
Confidence 999995 6888876 3344443
No 73
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.64 E-value=7.3e-14 Score=112.47 Aligned_cols=114 Identities=32% Similarity=0.379 Sum_probs=97.3
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
+++++|||. +.+..+++++++|+|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++.+
T Consensus 125 ~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 201 (324)
T cd08244 125 VHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPD 201 (324)
T ss_pred cchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHH
Confidence 556777854 446788999999999999999999999999999999999999999999998 9999999988776 7777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+.+++ ++ |++|+.....++++++++|+ +.+|...
T Consensus 202 ~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 244 (324)
T cd08244 202 QVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWAS 244 (324)
T ss_pred HHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCC
Confidence 77776654 55 89998888999999999995 6777654
No 74
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.63 E-value=1.1e-14 Score=118.50 Aligned_cols=160 Identities=18% Similarity=0.185 Sum_probs=120.5
Q ss_pred ccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCC
Q 029543 6 RNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGE 85 (192)
Q Consensus 6 ~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~ 85 (192)
..+..+.|.+.+..+...+|++++|+.++...+..-| .... +..+..+.++.++++++ .....+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp-------~~~~-----~~~a~~~~~~~~a~~~~--~~~~~~g~ 163 (340)
T TIGR00692 98 RRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNP-------KSIP-----PEYATIQEPLGNAVHTV--LAGPISGK 163 (340)
T ss_pred hCcChhhCcCcceEeecCCCcceeEEEeehHHcEECc-------CCCC-----hHhhhhcchHHHHHHHH--HccCCCCC
Confidence 3455667777666666567899999999886655222 2100 11111256788888886 23567899
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc-
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG- 158 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g- 158 (192)
+|+|.| +|++|.+++|+|+.+|++ |+++++++++.+.++ ++|++.++++... ++.+.+.+.+++ ++ |++|
T Consensus 164 ~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~~g~ 240 (340)
T TIGR00692 164 SVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEMSGA 240 (340)
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEECCCC
Confidence 999987 799999999999999995 888988889999888 9999999988776 888888777654 55 8888
Q ss_pred HHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 159 IEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 159 ~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
...+...+++++++|+ +.+|....
T Consensus 241 ~~~~~~~~~~l~~~g~~v~~g~~~~ 265 (340)
T TIGR00692 241 PKALEQGLQAVTPGGRVSLLGLPPG 265 (340)
T ss_pred HHHHHHHHHhhcCCCEEEEEccCCC
Confidence 4688899999999995 57776543
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.62 E-value=1.3e-14 Score=117.15 Aligned_cols=165 Identities=24% Similarity=0.261 Sum_probs=127.9
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
|..+.+|+|......|...+|++.++++++...+. .+|.... .. .....+++++++|+++.+..++.++
T Consensus 99 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~-------~~p~~~~-~~---~a~~~~~~~~~a~~~l~~~~~~~~~ 167 (342)
T cd08266 99 CLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLL-------PIPDNLS-FE---EAAAAPLTFLTAWHMLVTRARLRPG 167 (342)
T ss_pred hccccccccccccccccccCcceeEEEEechHHce-------eCCCCCC-HH---HHHhhhhHHHHHHHHHHHhcCCCCC
Confidence 56778899998888887778889999998865444 2222100 00 0011145788999998777889999
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGI 159 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~ 159 (192)
++++|+|+++++|++++++++..|++|+.+++++++.+.++ .++.+.+++..+. ++.+.+.+.+.+ ++ |++|.
T Consensus 168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~g~ 245 (342)
T cd08266 168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-DFVREVRELTGKRGVDVVVEHVGA 245 (342)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-HHHHHHHHHhCCCCCcEEEECCcH
Confidence 99999999899999999999999999999999999999998 8898888887765 666666665543 44 88888
Q ss_pred HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 160 EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
..+..++++++++|. +.+|....
T Consensus 246 ~~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 246 ATWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred HHHHHHHHHhhcCCEEEEEecCCC
Confidence 889999999999994 57776543
No 76
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.62 E-value=5.8e-15 Score=119.25 Aligned_cols=154 Identities=23% Similarity=0.297 Sum_probs=116.2
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
|+.|+.++|.+....+...+|++++++.++...+. .+|..... ....+ ++++.|||+++. ..++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-------~~p~~~~~~~~~~~-----~~~~~~a~~~l~-~~~~~~ 162 (325)
T cd08264 96 CLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLF-------KIPDSISDELAASL-----PVAALTAYHALK-TAGLGP 162 (325)
T ss_pred hcCCCccccCccceeeccCCCceeeEEEcCHHHce-------eCCCCCCHHHhhhh-----hhhhHHHHHHHH-hcCCCC
Confidence 56788899998777777677888999998876544 22221000 01111 557789999994 488999
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGI 159 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~ 159 (192)
|++|+|+|++|++|++++++|+++|++|+++++ .+.++ ++|++++++++ +..+.+++.+ +++ |++|+
T Consensus 163 g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~---~~~~~l~~~~-~~~d~vl~~~g~ 233 (325)
T cd08264 163 GETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYD---EVEEKVKEIT-KMADVVINSLGS 233 (325)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecch---HHHHHHHHHh-CCCCEEEECCCH
Confidence 999999998899999999999999999988873 36777 89999988764 3344555554 333 89998
Q ss_pred HHHHHHHHhhcCCCe-EEEeeC
Q 029543 160 EYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
..+..++++++++|+ +.+|..
T Consensus 234 ~~~~~~~~~l~~~g~~v~~g~~ 255 (325)
T cd08264 234 SFWDLSLSVLGRGGRLVTFGTL 255 (325)
T ss_pred HHHHHHHHhhccCCEEEEEecC
Confidence 899999999999995 577764
No 77
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.62 E-value=1e-14 Score=118.95 Aligned_cols=147 Identities=22% Similarity=0.143 Sum_probs=107.5
Q ss_pred ccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHH
Q 029543 19 LKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQ 98 (192)
Q Consensus 19 ~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~ 98 (192)
+|...+|++++|+.++...+. .+|+... .. .....++++.|+|+++ ...++.+|++|+|+|++|++|+
T Consensus 125 ~~~~~~g~~~~~~~v~~~~~~-------~ip~~~~-~~---~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~ 192 (350)
T cd08274 125 IGSERDGGFAEYTVVPAENAY-------PVNSPLS-DV---ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGS 192 (350)
T ss_pred cCCCCCccceEEEEecHHHce-------eCCCCCC-HH---HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHH
Confidence 443345788888888775444 2222110 00 0011266899999998 7788999999999998899999
Q ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCC
Q 029543 99 LVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRP 173 (192)
Q Consensus 99 ~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G 173 (192)
+++|+|+++|++|+++++++ +++.++ ++|++.+++..+. .+.+ .+.+.+ ++ |++|+..++.++++++++|
T Consensus 193 ~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G 267 (350)
T cd08274 193 ALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGG 267 (350)
T ss_pred HHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCC
Confidence 99999999999999998765 888888 9999876665544 4444 334443 55 8999889999999999999
Q ss_pred e-EEEeeCCC
Q 029543 174 L-KIMENDSG 182 (192)
Q Consensus 174 ~-v~~G~~~~ 182 (192)
+ +.+|...+
T Consensus 268 ~~v~~g~~~~ 277 (350)
T cd08274 268 RYVTAGAIAG 277 (350)
T ss_pred EEEEecccCC
Confidence 4 57776533
No 78
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.62 E-value=1.3e-14 Score=119.32 Aligned_cols=143 Identities=20% Similarity=0.147 Sum_probs=114.0
Q ss_pred CCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHH
Q 029543 24 AEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQ 102 (192)
Q Consensus 24 ~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q 102 (192)
.|.+++|+.++..++.. +|+.... ....+ +++++|||+++.+...+.++++|+|+| +|++|++++|
T Consensus 139 ~g~~~~~~~~~~~~~~~-------~P~~is~~~aa~l-----~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~ 205 (367)
T cd08263 139 MGGLAEYAVVPATALAP-------LPESLDYTESAVL-----GCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQ 205 (367)
T ss_pred CCcceeEEEechhhEEE-------CCCCCCHHHHhHh-----cchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHH
Confidence 57889999998876663 3322100 11112 568999999997777788999999996 8999999999
Q ss_pred HHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccHH-HHHHHHHhhcCCCe-
Q 029543 103 FAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGIE-YCRSLLLVLLFRPL- 174 (192)
Q Consensus 103 ~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~~-~~~~~~~~l~~~G~- 174 (192)
+|+..|++ |++++.++++.+.++ ++|++.++++++. ++.+.+++..++ ++ |++|+. ....++++++++|+
T Consensus 206 lak~~G~~~vi~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~ 283 (367)
T cd08263 206 LAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRA 283 (367)
T ss_pred HHHHcCCCeEEEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEE
Confidence 99999996 999999999999998 8999999998876 788888777654 54 888876 88999999999995
Q ss_pred EEEeeCC
Q 029543 175 KIMENDS 181 (192)
Q Consensus 175 v~~G~~~ 181 (192)
+.+|..+
T Consensus 284 v~~g~~~ 290 (367)
T cd08263 284 VVVGLAP 290 (367)
T ss_pred EEEccCC
Confidence 5677543
No 79
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.62 E-value=1.3e-14 Score=119.26 Aligned_cols=162 Identities=14% Similarity=0.136 Sum_probs=117.4
Q ss_pred cccchhhhhhhhccccc-cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 5 IRNTSKRLCKIQNILKQ-NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~-~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
|+.|..++|++...++. ..+|++++|+.++...+. .+|... ++.......++.++++++ +..++.+
T Consensus 115 c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~-------~~P~~l-----~~~~aa~~~~~~~a~~~~-~~~~~~~ 181 (364)
T PLN02702 115 CKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF-------KLPENV-----SLEEGAMCEPLSVGVHAC-RRANIGP 181 (364)
T ss_pred hhCcCcccCCCccccCCCCCCCcccceEEcchHHeE-------ECCCCC-----CHHHHhhhhHHHHHHHHH-HhcCCCC
Confidence 45677888887544432 247899999999876554 222210 010101023566788888 7788999
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecC--CcccHHHHHHhh---ccCCc---
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYK--EEPDLDVALKRM---FLCWV--- 154 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~--~~~~~~~~i~~~---~~~g~--- 154 (192)
|++|+|+| +|++|++++|+|+.+|+ .|+++++++++.+.++ ++|++.++++. ++ ++.+.+.+. +++++
T Consensus 182 g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~v 258 (364)
T PLN02702 182 ETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE-DVESEVEEIQKAMGGGIDVS 258 (364)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc-cHHHHHHHHhhhcCCCCCEE
Confidence 99999997 79999999999999999 5888888899999888 99999887653 34 676666544 22234
Q ss_pred -cccc-HHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 155 -DFVG-IEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 155 -d~~g-~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
|++| ...+..++++++++|+ +.+|...+
T Consensus 259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 289 (364)
T PLN02702 259 FDCVGFNKTMSTALEATRAGGKVCLVGMGHN 289 (364)
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence 8998 5789999999999995 57776543
No 80
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.62 E-value=1.6e-14 Score=116.77 Aligned_cols=116 Identities=47% Similarity=0.541 Sum_probs=101.2
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh-cCCCeeeecCCcccHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK-FGFDDAFNYKEEPDLD 143 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~ 143 (192)
++++.|+|+++.+...+.++++|+|+|++|++|++++|+|+..|++|+++++++++.+.++ + +|++.++++++. ++.
T Consensus 127 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~ 204 (329)
T cd05288 127 GMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV-EELGFDAAINYKTP-DLA 204 (329)
T ss_pred ccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hhcCCceEEecCCh-hHH
Confidence 6789999999977778899999999999999999999999999999999999999999998 6 999999998876 777
Q ss_pred HHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 144 VALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 144 ~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
+.+.+.+++++ |++|+..++.++++++++|+ +.+|..+.
T Consensus 205 ~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 248 (329)
T cd05288 205 EALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQ 248 (329)
T ss_pred HHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccC
Confidence 77776654344 89999899999999999995 57886543
No 81
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.62 E-value=1.4e-14 Score=118.05 Aligned_cols=160 Identities=22% Similarity=0.201 Sum_probs=121.2
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
++.++.|+|...++.|...+|+++++++++..++.- +|.... ...+..++++.++++++. ....+|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~-------lP~~~~-----~~~a~~~~~~~~a~~~~~--~~~~~g 164 (341)
T cd05281 99 CRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWK-------NDKDIP-----PEIASIQEPLGNAVHTVL--AGDVSG 164 (341)
T ss_pred HHCcCcccCcccceEeccCCCcceEEEEechHHcEE-------CcCCCC-----HHHhhhhhHHHHHHHHHH--hcCCCC
Confidence 456677888777666666678899999998766552 222100 011122557888888873 355789
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG 158 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g 158 (192)
++|+|.| +|++|++++|+|++.|+ +|++++++++|.+.++ ++|++++++++.. ++. .+++.+.+ ++ |++|
T Consensus 165 ~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~-~~~~~~~~~~vd~vld~~g 240 (341)
T cd05281 165 KSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE-DVV-EVKSVTDGTGVDVVLEMSG 240 (341)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-cHH-HHHHHcCCCCCCEEEECCC
Confidence 9999987 69999999999999999 7999988899999998 9999999988766 777 77777664 55 8887
Q ss_pred H-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 159 I-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 159 ~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
+ .....++++++++|+ +.+|....
T Consensus 241 ~~~~~~~~~~~l~~~G~~v~~g~~~~ 266 (341)
T cd05281 241 NPKAIEQGLKALTPGGRVSILGLPPG 266 (341)
T ss_pred CHHHHHHHHHHhccCCEEEEEccCCC
Confidence 4 578899999999995 56775443
No 82
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.61 E-value=1.1e-14 Score=117.09 Aligned_cols=159 Identities=23% Similarity=0.200 Sum_probs=118.0
Q ss_pred cchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCE
Q 029543 7 NTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEY 86 (192)
Q Consensus 7 ~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~ 86 (192)
.+..+.|+..+.+|...+|++++|+.++...+..-| ......... .+.+.+++|+++....++.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp-------~~~~~~~aa-----~~~~~~~a~~~l~~~~~~~~g~~ 167 (306)
T cd08258 100 RGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELP-------ENLSLEAAA-----LTEPLAVAVHAVAERSGIRPGDT 167 (306)
T ss_pred CcCcccCCCCceeeecCCCceEEEEEcchHHeEECc-------CCCCHHHHH-----hhchHHHHHHHHHHhcCCCCCCE
Confidence 344455655445555567899999999887655222 211000011 14578899999878888999999
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc-
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSA--GSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG- 158 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g- 158 (192)
|+|.| +|++|.+++|+|++.|++|+.+. +++++.+.++ ++|++.+ ++... ++.+.+.+...+ ++ |++|
T Consensus 168 vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~~l~~~~~~~~vd~vld~~g~ 243 (306)
T cd08258 168 VVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE-DLAELVNEITDGDGADVVIECSGA 243 (306)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC-CHHHHHHHHcCCCCCCEEEECCCC
Confidence 99987 89999999999999999987763 3456778888 8999888 87766 888888776654 55 8887
Q ss_pred HHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 159 IEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 159 ~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+..+...++.++++|+ +.+|..+
T Consensus 244 ~~~~~~~~~~l~~~G~~v~~g~~~ 267 (306)
T cd08258 244 VPALEQALELLRKGGRIVQVGIFG 267 (306)
T ss_pred hHHHHHHHHHhhcCCEEEEEcccC
Confidence 5688899999999995 5788865
No 83
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.61 E-value=1.7e-14 Score=116.43 Aligned_cols=144 Identities=20% Similarity=0.155 Sum_probs=104.0
Q ss_pred CCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHh--C-CCCCCEEEEeCCCchHHHHH
Q 029543 24 AEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEIC--S-PKKGEYVYVSAASGAVGQLV 100 (192)
Q Consensus 24 ~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~--~-~~~g~~VlV~Ga~G~iG~~~ 100 (192)
+|++++|+.++...+..-|... +.. ....+ ++++.||++++.... . ...+++|+|+|++|++|+++
T Consensus 95 ~g~~~~~~~v~~~~~~~~p~~~---~~~---~a~~~-----~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~ 163 (326)
T cd08289 95 HGGYSEYARVPAEWVVPLPKGL---TLK---EAMIL-----GTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLA 163 (326)
T ss_pred CCcceeEEEEcHHHeEECCCCC---CHH---HHhhh-----hhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHH
Confidence 5777777777765444222110 000 01111 457788888875332 2 33478999999889999999
Q ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-E
Q 029543 101 GQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-K 175 (192)
Q Consensus 101 ~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v 175 (192)
+|+|+++|++|+++++++++.+.++ ++|++.++++++. ..+.+++..+.++ |++|+..+..++++++++|+ +
T Consensus 164 ~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i 240 (326)
T cd08289 164 VSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVA 240 (326)
T ss_pred HHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEE
Confidence 9999999999999999999999998 9999999887643 2444555543344 89998899999999999995 6
Q ss_pred EEeeCC
Q 029543 176 IMENDS 181 (192)
Q Consensus 176 ~~G~~~ 181 (192)
.+|...
T Consensus 241 ~~g~~~ 246 (326)
T cd08289 241 VSGLTG 246 (326)
T ss_pred EEeecC
Confidence 888753
No 84
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.61 E-value=1.6e-14 Score=116.92 Aligned_cols=162 Identities=19% Similarity=0.150 Sum_probs=119.9
Q ss_pred ccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCC
Q 029543 6 RNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGE 85 (192)
Q Consensus 6 ~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~ 85 (192)
..++.++|......|....|.+++|+.++...+.. +|...... .....+.+++|||+++.+..++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------lp~~~~~~----~a~~~~~~~~ta~~~l~~~~~~~~~~ 167 (338)
T cd08254 99 RRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVP-------VPDGVPFA----QAAVATDAVLTPYHAVVRAGEVKPGE 167 (338)
T ss_pred hCcCcccCCCCCccccccCCcceeeEEechHHeEE-------CCCCCCHH----HhhhhcchHHHHHHHHHhccCCCCCC
Confidence 34445566555555666678889999998765542 22210000 00111568999999997777899999
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc-H
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG-I 159 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g-~ 159 (192)
+|+|.| +|++|++++++|+..|++|+++++++++.+.++ ++|++.+++..+. .+.+.+ +...+ ++ |++| .
T Consensus 168 ~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~~-~~~~~~~~D~vid~~g~~ 243 (338)
T cd08254 168 TVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-SPKDKK-AAGLGGGFDVIFDFVGTQ 243 (338)
T ss_pred EEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-CHHHHH-HHhcCCCceEEEECCCCH
Confidence 999987 799999999999999999999999999999998 8999999887765 666666 34433 44 8887 5
Q ss_pred HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 160 EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
..++.++++++++|+ +.+|....
T Consensus 244 ~~~~~~~~~l~~~G~~v~~g~~~~ 267 (338)
T cd08254 244 PTFEDAQKAVKPGGRIVVVGLGRD 267 (338)
T ss_pred HHHHHHHHHhhcCCEEEEECCCCC
Confidence 688999999999995 56776543
No 85
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.61 E-value=1.3e-13 Score=110.99 Aligned_cols=114 Identities=22% Similarity=0.245 Sum_probs=88.3
Q ss_pred chhHHHHHHHHHHHhCC--C-CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCccc
Q 029543 65 IMPSVTAFAGLYEICSP--K-KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 141 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~--~-~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 141 (192)
++.+.|+|++++...+. . .+++|+|+|++|++|++++|+|+.+|++|+++++++++++.++ ++|++.++++++. .
T Consensus 125 ~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~ 202 (325)
T cd05280 125 GTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L 202 (325)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H
Confidence 45667888887544333 4 3579999998899999999999999999999999999999998 9999999886532 1
Q ss_pred HHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 142 LDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 142 ~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+..+....+++ |++|+..+..++++++++|+ +.+|...
T Consensus 203 -~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 246 (325)
T cd05280 203 -DESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAA 246 (325)
T ss_pred -HHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCC
Confidence 122222222233 89998999999999999995 5778654
No 86
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.61 E-value=2.1e-14 Score=112.39 Aligned_cols=156 Identities=31% Similarity=0.335 Sum_probs=116.4
Q ss_pred hhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeC
Q 029543 12 LCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSA 91 (192)
Q Consensus 12 ~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~G 91 (192)
.|.+....+...+|.+++|+.++...+.. +|.... .. .....++++.|||+++.+...+.++++|+|+|
T Consensus 74 ~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-------ip~~~~-~~---~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g 142 (271)
T cd05188 74 LCPGGGILGEGLDGGFAEYVVVPADNLVP-------LPDGLS-LE---EAALLPEPLATAYHALRRAGVLKPGDTVLVLG 142 (271)
T ss_pred hCCCCCEeccccCCcceEEEEechHHeEE-------CCCCCC-HH---HhhHhcCHHHHHHHHHHhccCCCCCCEEEEEC
Confidence 35555555666688889999988765552 222100 00 00111468999999997766678999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccH-HHHHHH
Q 029543 92 ASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGI-EYCRSL 165 (192)
Q Consensus 92 a~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~-~~~~~~ 165 (192)
+++ +|++++++++..|.+|+++++++++.+.++ ++|++.++++.+. +..+.+. ...+ ++ |+++. .....+
T Consensus 143 ~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~ 218 (271)
T cd05188 143 AGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQA 218 (271)
T ss_pred CCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHH
Confidence 655 999999999999999999999999999998 8999998887766 6666655 3332 44 88887 788999
Q ss_pred HHhhcCCCe-EEEeeCCC
Q 029543 166 LLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 166 ~~~l~~~G~-v~~G~~~~ 182 (192)
+++++++|+ +.+|....
T Consensus 219 ~~~l~~~G~~v~~~~~~~ 236 (271)
T cd05188 219 LRLLRPGGRIVVVGGTSG 236 (271)
T ss_pred HHhcccCCEEEEEccCCC
Confidence 999999995 57776544
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.61 E-value=2.8e-14 Score=115.24 Aligned_cols=163 Identities=21% Similarity=0.197 Sum_probs=123.2
Q ss_pred ccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCC
Q 029543 6 RNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGE 85 (192)
Q Consensus 6 ~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~ 85 (192)
+.+..+.|......|...+|++++++.++...+.. ++... +.. .....++++++||+++.+...+.+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------lp~~~-~~~---~a~~~~~~~~~a~~~l~~~~~~~~g~ 162 (336)
T cd08276 94 LDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVR-------APDHL-SFE---EAATLPCAGLTAWNALFGLGPLKPGD 162 (336)
T ss_pred ccccccccccccccccccCceeeeEEEecHHHeEE-------CCCCC-CHH---HhhhhhHHHHHHHHHHHhhcCCCCCC
Confidence 44455566555455555577888888887655442 22210 000 00111568899999987777899999
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCC-cccHHHHHHhhccC-Cc----ccccH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLDVALKRMFLC-WV----DFVGI 159 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~~-g~----d~~g~ 159 (192)
+|+|+| +|++|+++++++++.|++|+++++++++.+.++ ++|.+.+++... . ++.+.+++.+.+ ++ |++++
T Consensus 163 ~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~ 239 (336)
T cd08276 163 TVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEEVLKLTGGRGVDHVVEVGGP 239 (336)
T ss_pred EEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHHHHHHcCCCCCcEEEECCCh
Confidence 999996 899999999999999999999999999999999 799999998776 4 788888877764 55 88888
Q ss_pred HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 160 EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
.....++++++++|+ +.+|..+.
T Consensus 240 ~~~~~~~~~l~~~G~~v~~g~~~~ 263 (336)
T cd08276 240 GTLAQSIKAVAPGGVISLIGFLSG 263 (336)
T ss_pred HHHHHHHHhhcCCCEEEEEccCCC
Confidence 889999999999995 67886544
No 88
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.60 E-value=2.6e-14 Score=116.30 Aligned_cols=158 Identities=20% Similarity=0.235 Sum_probs=117.9
Q ss_pred hhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEE
Q 029543 9 SKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVY 88 (192)
Q Consensus 9 ~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~Vl 88 (192)
....|.....+|...+|.+++|+.++...+..-| ... ++..+....+++|||+++ ...++.++++|+
T Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP-------~~~-----~~~~aa~~~~~~ta~~~l-~~~~~~~~~~vl 164 (343)
T cd08236 98 EYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIP-------DHV-----DYEEAAMIEPAAVALHAV-RLAGITLGDTVV 164 (343)
T ss_pred ChhhCCCcceEecccCCcccceEEechHHeEECc-------CCC-----CHHHHHhcchHHHHHHHH-HhcCCCCCCEEE
Confidence 3444444444555567899999999987665322 211 011111123678999999 477899999999
Q ss_pred EeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccH-HH
Q 029543 89 VSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGI-EY 161 (192)
Q Consensus 89 V~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~-~~ 161 (192)
|+| +|.+|.+++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. . .+.+++..++ ++ |++|+ ..
T Consensus 165 I~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~ 240 (343)
T cd08236 165 VIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-D-VEKVRELTEGRGADLVIEAAGSPAT 240 (343)
T ss_pred EEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-c-HHHHHHHhCCCCCCEEEECCCCHHH
Confidence 997 799999999999999996 999999999999998 8999999998776 6 6666666554 45 88874 68
Q ss_pred HHHHHHhhcCCCe-EEEeeCCCC
Q 029543 162 CRSLLLVLLFRPL-KIMENDSGS 183 (192)
Q Consensus 162 ~~~~~~~l~~~G~-v~~G~~~~~ 183 (192)
+..++++++++|+ +.+|...+.
T Consensus 241 ~~~~~~~l~~~G~~v~~g~~~~~ 263 (343)
T cd08236 241 IEQALALARPGGKVVLVGIPYGD 263 (343)
T ss_pred HHHHHHHhhcCCEEEEEcccCCC
Confidence 8899999999995 577755443
No 89
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.60 E-value=1.9e-14 Score=117.06 Aligned_cols=162 Identities=17% Similarity=0.193 Sum_probs=119.8
Q ss_pred cccchhhhhhhhccc-------cccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHH
Q 029543 5 IRNTSKRLCKIQNIL-------KQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLY 76 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~-------g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~ 76 (192)
|+.+..|+|++.... +...+|.+++|+.++...+. .+|..... ....+ .+++.|||+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-------~lp~~~~~~~aa~l-----~~~~~ta~~~~~ 163 (337)
T cd05283 96 CKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVF-------KIPEGLDSAAAAPL-----LCAGITVYSPLK 163 (337)
T ss_pred ccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheE-------ECCCCCCHHHhhhh-----hhHHHHHHHHHH
Confidence 567788889876543 33457899999999987655 22221100 11112 568899999984
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc--
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV-- 154 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~-- 154 (192)
...+.+|++++|.| .|++|++++|+++..|++|+++++++++.+.++ ++|++.+++.+.. ++.+.. ..++
T Consensus 164 -~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~----~~~~d~ 235 (337)
T cd05283 164 -RNGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKDP-EAMKKA----AGSLDL 235 (337)
T ss_pred -hcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcch-hhhhhc----cCCceE
Confidence 45689999999987 899999999999999999999999999999998 9999999887654 433221 2233
Q ss_pred --ccccHH-HHHHHHHhhcCCCe-EEEeeCCCCCcc
Q 029543 155 --DFVGIE-YCRSLLLVLLFRPL-KIMENDSGSTPI 186 (192)
Q Consensus 155 --d~~g~~-~~~~~~~~l~~~G~-v~~G~~~~~~~~ 186 (192)
|++|.. ....++++++++|+ +.+|......++
T Consensus 236 v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 271 (337)
T cd05283 236 IIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPV 271 (337)
T ss_pred EEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCcc
Confidence 888876 58999999999995 578876544333
No 90
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.60 E-value=2.6e-13 Score=109.99 Aligned_cols=113 Identities=19% Similarity=0.268 Sum_probs=94.0
Q ss_pred chhHHHHHHHHHHHhCCCC-----CCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeeecCC
Q 029543 65 IMPSVTAFAGLYEICSPKK-----GEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFGFDDAFNYKE 138 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~-----g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~ 138 (192)
++++.|+|+++.+...+.+ |++|+|+|++|++|++++|+|+.+| ++|+++++++++.+.++ ++|++.++++.+
T Consensus 126 ~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 204 (336)
T cd08252 126 PLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ 204 (336)
T ss_pred hhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc
Confidence 5567889998877778877 9999999989999999999999999 89999999999999998 999999998763
Q ss_pred cccHHHHHHhhccCCc----cccc-HHHHHHHHHhhcCCCe-EEEeeC
Q 029543 139 EPDLDVALKRMFLCWV----DFVG-IEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 139 ~~~~~~~i~~~~~~g~----d~~g-~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
++.+.++.....++ |++| ...+..++++++++|+ +.+|..
T Consensus 205 --~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~ 250 (336)
T cd08252 205 --DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDP 250 (336)
T ss_pred --cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCC
Confidence 56666664432344 8888 4789999999999995 567754
No 91
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.60 E-value=2.4e-14 Score=116.52 Aligned_cols=161 Identities=20% Similarity=0.145 Sum_probs=119.6
Q ss_pred ccchhhhhhhhccc---cccCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHh
Q 029543 6 RNTSKRLCKIQNIL---KQNAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEIC 79 (192)
Q Consensus 6 ~~g~~~~C~~~~~~---g~~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~ 79 (192)
+++..++|++.... +...+|.+++|+.++.. ++.. +|..... ....+ +++++|||+++ ...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~-------lP~~~~~~~aa~l-----~~~~~ta~~~~-~~~ 163 (347)
T cd05278 97 RRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAK-------IPDGLPDEDALML-----SDILPTGFHGA-ELA 163 (347)
T ss_pred hCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEE-------CCCCCCHHHHhhh-----cchhhheeehh-hhc
Confidence 34555566553311 22346888999999875 4442 2221000 11112 56889999998 678
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc---
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV--- 154 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~--- 154 (192)
++.+|++|+|.| +|++|.+++|+||.+|+ +|+++++++++.+.++ ++|++.+++++++ ++.+.+++.+++ ++
T Consensus 164 ~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~i~~~~~~~~~d~v 240 (347)
T cd05278 164 GIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKNG-DIVEQILELTGGRGVDCV 240 (347)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCcc-hHHHHHHHHcCCCCCcEE
Confidence 899999999987 79999999999999997 8999998999999998 9999999998876 788888776654 55
Q ss_pred -ccccH-HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 155 -DFVGI-EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 155 -d~~g~-~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
|++|+ ..+..++++++++|+ +.+|...+
T Consensus 241 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 271 (347)
T cd05278 241 IEAVGFEETFEQAVKVVRPGGTIANVGVYGK 271 (347)
T ss_pred EEccCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 88886 688999999999995 56775543
No 92
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.59 E-value=4e-13 Score=106.71 Aligned_cols=113 Identities=24% Similarity=0.300 Sum_probs=99.1
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
+.+++|+|+++ +..++.+|++|+|+|++|++|++++|+++++|++|+++++++++.+.++ ++|++.+++.... ++.+
T Consensus 103 ~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 179 (303)
T cd08251 103 PVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEE 179 (303)
T ss_pred HHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHH
Confidence 56788999998 5788999999999999999999999999999999999999999999998 8999999998776 7888
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
.+++.+++ ++ |++++.....++++++++|+ +.+|..
T Consensus 180 ~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 221 (303)
T cd08251 180 EIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMT 221 (303)
T ss_pred HHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEecc
Confidence 88877765 55 88888889999999999995 566654
No 93
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.59 E-value=4.2e-14 Score=116.80 Aligned_cols=146 Identities=21% Similarity=0.136 Sum_probs=108.3
Q ss_pred CCCCCCCeEEEEEE--EeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHH
Q 029543 23 AAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLV 100 (192)
Q Consensus 23 ~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~ 100 (192)
.+|++++|+.++.. .+. .+|+..... ..-......++++|+|+++ ...++.+|++|+|.| .|++|+++
T Consensus 123 ~~g~~a~y~~v~~~~~~~~-------~lP~~~~~~-~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~ 192 (375)
T cd08282 123 YGGGQAEYLRVPYADFNLL-------KLPDRDGAK-EKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMA 192 (375)
T ss_pred CCCeeeeEEEeecccCcEE-------ECCCCCChh-hhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHH
Confidence 46889999999864 343 222210000 0000111156889999999 788999999999987 79999999
Q ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHH------------HHH
Q 029543 101 GQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIE------------YCR 163 (192)
Q Consensus 101 ~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~------------~~~ 163 (192)
+|+|+++|+ +|++++++++|.+.++ ++|+ ..++++++ ++.+.+.+.+++++ |++|+. .+.
T Consensus 193 ~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~ 269 (375)
T cd08282 193 AYSAILRGASRVYVVDHVPERLDLAE-SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLN 269 (375)
T ss_pred HHHHHHcCCCEEEEECCCHHHHHHHH-HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHH
Confidence 999999998 8999999999999999 9998 45777766 77777777654333 888865 488
Q ss_pred HHHHhhcCCCe-EEEeeCC
Q 029543 164 SLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 164 ~~~~~l~~~G~-v~~G~~~ 181 (192)
.++++++++|+ +.+|..+
T Consensus 270 ~~~~~l~~~g~~~~~g~~~ 288 (375)
T cd08282 270 QLIRVTRPGGGIGIVGVYV 288 (375)
T ss_pred HHHHHhhcCcEEEEEeccC
Confidence 99999999995 4667643
No 94
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.59 E-value=3.2e-13 Score=107.72 Aligned_cols=115 Identities=34% Similarity=0.400 Sum_probs=99.6
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
+.++.++++++.+..++.+|++|+|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++.+++.... ++.+
T Consensus 118 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 195 (320)
T cd05286 118 LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVE 195 (320)
T ss_pred cchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHH
Confidence 5677888988877788999999999999999999999999999999999999999999998 8999999887765 7777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+++.+.+ ++ |++|+.....++++++++|+ +.+|...
T Consensus 196 ~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 196 RVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCC
Confidence 78777654 55 88888888999999999995 5777644
No 95
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.59 E-value=6.9e-14 Score=112.67 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=78.8
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD 143 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 143 (192)
.+++.|||+++.+ . ..++++|+|+| +|++|++++|+||++|++ |++++++++|++.++ + +.++|+.+ +
T Consensus 128 ~~~~~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~---~~~i~~~~--~-- 196 (308)
T TIGR01202 128 LALAATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-G---YEVLDPEK--D-- 196 (308)
T ss_pred hhHHHHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-h---ccccChhh--c--
Confidence 3467899999944 3 34689999998 899999999999999995 667787888877766 4 34565432 1
Q ss_pred HHHHhhccCCc----ccccHH-HHHHHHHhhcCCCe-EEEeeCCCCCcccc
Q 029543 144 VALKRMFLCWV----DFVGIE-YCRSLLLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 144 ~~i~~~~~~g~----d~~g~~-~~~~~~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
.+.++ |++|+. .++.++++++++|+ +++|...++.++++
T Consensus 197 ------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~ 241 (308)
T TIGR01202 197 ------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDF 241 (308)
T ss_pred ------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCccccc
Confidence 11122 999974 78999999999995 57887655444443
No 96
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.59 E-value=4.7e-13 Score=107.12 Aligned_cols=115 Identities=30% Similarity=0.387 Sum_probs=99.2
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.+||+++.+..++.+|++|+|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+
T Consensus 126 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 203 (325)
T cd08253 126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLAD 203 (325)
T ss_pred hhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHH
Confidence 5678899999877788999999999999999999999999999999999999999999998 8999999988766 7777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+++.+.+ ++ |++|+...+..+++++++|. +.+|...
T Consensus 204 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~ 246 (325)
T cd08253 204 RILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGG 246 (325)
T ss_pred HHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecC
Confidence 77776654 55 88888888889999999994 5777643
No 97
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.59 E-value=3.5e-14 Score=117.79 Aligned_cols=144 Identities=20% Similarity=0.186 Sum_probs=108.9
Q ss_pred CCCCCCeEEEEEE--EeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHH
Q 029543 24 AEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLV 100 (192)
Q Consensus 24 ~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~ 100 (192)
+|.+++|++++.. .+. .+|+.... ....+ +++++|||+++ +..++.+|++|+|+| +|++|+++
T Consensus 135 ~g~~~~~~~v~~~~~~~~-------~lp~~~~~~~aa~l-----~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~ 200 (386)
T cd08283 135 AGGQAEYVRVPFADVGPF-------KIPDDLSDEKALFL-----SDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFA 200 (386)
T ss_pred CCeeEEEEEcccccCeEE-------ECCCCCCHHHHhhh-----ccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHH
Confidence 6888999999876 443 22221100 11111 55889999999 788999999999997 79999999
Q ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccH---------------
Q 029543 101 GQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGI--------------- 159 (192)
Q Consensus 101 ~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~--------------- 159 (192)
+|+|++.|+ +|+++++++++.+.++ +++...++++..++++.+.+++.+.+ ++ |++|+
T Consensus 201 ~~la~~~g~~~vi~~~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~ 279 (386)
T cd08283 201 ARSAKLLGAERVIAIDRVPERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALL 279 (386)
T ss_pred HHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCccccccccccccccc
Confidence 999999998 6999999999999999 77444677776541377778777654 45 88874
Q ss_pred -------HHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 160 -------EYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 160 -------~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
..++.++++++++|+ +.+|....
T Consensus 280 ~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~ 310 (386)
T cd08283 280 KLETDRPDALREAIQAVRKGGTVSIIGVYGG 310 (386)
T ss_pred ccccCchHHHHHHHHHhccCCEEEEEcCCCC
Confidence 367889999999995 57776544
No 98
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.59 E-value=2.5e-13 Score=109.49 Aligned_cols=113 Identities=22% Similarity=0.198 Sum_probs=88.7
Q ss_pred chhHHHHHHHHHHH--hCCCCCC-EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCccc
Q 029543 65 IMPSVTAFAGLYEI--CSPKKGE-YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 141 (192)
Q Consensus 65 ~~~~~ta~~~l~~~--~~~~~g~-~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 141 (192)
+.++.++++++... ..+.+|+ +|+|+|++|++|.+++|+|+++|++++++++++++.+.++ ++|++.+++.++. +
T Consensus 124 ~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~ 201 (323)
T TIGR02823 124 GTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-S 201 (323)
T ss_pred hhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-H
Confidence 34566777666433 3478898 9999998899999999999999999999988999999998 9999998887543 3
Q ss_pred HHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 142 LDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 142 ~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
. .++....+++ |++|++.+..++++++++|+ +.+|...
T Consensus 202 ~--~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 244 (323)
T TIGR02823 202 P--PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAG 244 (323)
T ss_pred H--HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccC
Confidence 2 3444433223 99998889999999999994 6888654
No 99
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.59 E-value=6.4e-14 Score=115.19 Aligned_cols=143 Identities=17% Similarity=0.128 Sum_probs=113.6
Q ss_pred CCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHH
Q 029543 24 AEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQ 102 (192)
Q Consensus 24 ~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q 102 (192)
.|.+++|++++..++.. +|+.... ....+ +++++|||+++.+..++.+|++|+|+| +|++|+++++
T Consensus 134 ~g~~~~~~~~~~~~~~~-------lp~~~~~~~aa~~-----~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~ 200 (363)
T cd08279 134 LGTFAEYTVVPEASVVK-------IDDDIPLDRAALL-----GCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQ 200 (363)
T ss_pred CccceeeEEeccccEEE-------CCCCCChHHeehh-----cchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHH
Confidence 57889999999877663 2322100 11111 557899999987788899999999996 7999999999
Q ss_pred HHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----cccc-HHHHHHHHHhhcCCCe-
Q 029543 103 FAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVG-IEYCRSLLLVLLFRPL- 174 (192)
Q Consensus 103 ~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g-~~~~~~~~~~l~~~G~- 174 (192)
+|+..|++ |+++++++++.+.++ ++|++++++.+.. ++.+.+++.+.+ ++ |++| ...+..++++++++|+
T Consensus 201 lak~~G~~~Vi~~~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~ 278 (363)
T cd08279 201 GARIAGASRIIAVDPVPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTA 278 (363)
T ss_pred HHHHcCCCcEEEEcCCHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeE
Confidence 99999995 999999999999998 9999999988876 788888777643 45 8888 5688999999999995
Q ss_pred EEEeeCC
Q 029543 175 KIMENDS 181 (192)
Q Consensus 175 v~~G~~~ 181 (192)
+.+|...
T Consensus 279 v~~g~~~ 285 (363)
T cd08279 279 VVVGMGP 285 (363)
T ss_pred EEEecCC
Confidence 5777654
No 100
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.58 E-value=3.2e-13 Score=108.22 Aligned_cols=112 Identities=18% Similarity=0.116 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 66 MPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 66 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
.+++++++++. ..+++++++|+|+| +|++|.+++|+|+..|++ |+++++++++.+.++ ++|++.+++++.. ++.+
T Consensus 113 ~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 188 (312)
T cd08269 113 EPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVE 188 (312)
T ss_pred hhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHH
Confidence 67788888884 78899999999997 799999999999999997 999999999999888 9999999987665 7888
Q ss_pred HHHhhccC-Cc----ccccH-HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGI-EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~-~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+.+.+ ++ |++|+ .....++++++++|+ +.+|..+
T Consensus 189 ~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~ 232 (312)
T cd08269 189 RVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQ 232 (312)
T ss_pred HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCC
Confidence 88877664 55 88874 578899999999995 5777653
No 101
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.58 E-value=5.4e-13 Score=106.57 Aligned_cols=115 Identities=30% Similarity=0.351 Sum_probs=98.3
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.++|+++.+...+.++++|+|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+
T Consensus 121 ~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 198 (323)
T cd05276 121 PEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAE 198 (323)
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHH
Confidence 5678899999877778899999999999999999999999999999999999999999998 8999888888766 7777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+.+.+ ++ |++|+..+..++++++++|+ +.+|..+
T Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~ 241 (323)
T cd05276 199 EVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLG 241 (323)
T ss_pred HHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCC
Confidence 77766544 44 89998888899999999995 5677643
No 102
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.58 E-value=6.8e-14 Score=114.02 Aligned_cols=146 Identities=14% Similarity=0.024 Sum_probs=110.8
Q ss_pred cCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHH
Q 029543 22 NAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQ 98 (192)
Q Consensus 22 ~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~ 98 (192)
...|.+++|+.++.. .+. .+|..... ....+ +++++|||+++....++.+|++|+|.| +|++|.
T Consensus 114 ~~~g~~~~~~~v~~~~~~~~-------~lp~~~~~~~aa~l-----~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~~g~ 180 (345)
T cd08286 114 LIDGTQAEYVRIPHADNSLY-------KLPEGVDEEAAVML-----SDILPTGYECGVLNGKVKPGDTVAIVG-AGPVGL 180 (345)
T ss_pred ccCCeeeeEEEcccccCceE-------ECCCCCCHHHhhhc-----cchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHH
Confidence 345788899999865 333 22221000 11111 557899998776777899999999998 699999
Q ss_pred HHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc----ccccH-HHHHHHHHhhcC
Q 029543 99 LVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV----DFVGI-EYCRSLLLVLLF 171 (192)
Q Consensus 99 ~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~----d~~g~-~~~~~~~~~l~~ 171 (192)
+++|+||.+| .+|++++++++|.+.++ ++|++.++++.+. ++.+.+.+.+.+ ++ |++|. ..++.+++.+++
T Consensus 181 ~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~ 258 (345)
T cd08286 181 AALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAP 258 (345)
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccC
Confidence 9999999999 59999999999999998 9999999998876 777777776654 45 88884 588889999999
Q ss_pred CCe-EEEeeCCC
Q 029543 172 RPL-KIMENDSG 182 (192)
Q Consensus 172 ~G~-v~~G~~~~ 182 (192)
+|+ +.+|....
T Consensus 259 ~g~~v~~g~~~~ 270 (345)
T cd08286 259 GGHIANVGVHGK 270 (345)
T ss_pred CcEEEEecccCC
Confidence 995 57776543
No 103
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.57 E-value=3.5e-13 Score=109.86 Aligned_cols=111 Identities=25% Similarity=0.345 Sum_probs=90.2
Q ss_pred chhHHHHHHHHHHHhCCCC----CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcc
Q 029543 65 IMPSVTAFAGLYEICSPKK----GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 140 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~----g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 140 (192)
++++.|+|+++.+...+.+ |++|+|+|++|++|++++++|+++|++|++++++ ++.+.++ ++|++.+++..+.
T Consensus 140 ~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~- 216 (350)
T cd08248 140 PYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE- 216 (350)
T ss_pred hhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-
Confidence 5678899999866666654 9999999999999999999999999999988865 6777888 9999999988765
Q ss_pred cHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 141 DLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 141 ~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
++.+.+... .++ |++|+.....++++++++|+ +.+|..
T Consensus 217 ~~~~~l~~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 217 DFEEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred hHHHHHHhc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCC
Confidence 666555432 233 89998899999999999995 567643
No 104
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.57 E-value=6.1e-14 Score=113.21 Aligned_cols=160 Identities=23% Similarity=0.206 Sum_probs=121.3
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHHhCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEICSPKK 83 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~~~~~~ 83 (192)
++.+..++|++....|...+|.+++|+.++...+.. +|+.... ....+ ++++.|||+++.. .++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-------ip~~~~~~~~~~~-----~~~~~ta~~~l~~-~~~~~ 162 (332)
T cd08259 96 CLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVK-------LPDNVSDESAALA-----ACVVGTAVHALKR-AGVKK 162 (332)
T ss_pred hhCCCcccCCCccccccccCCeeeeEEEechhheEE-------CCCCCCHHHHhhh-----ccHHHHHHHHHHH-hCCCC
Confidence 456677889887677777788999999998765552 2221000 01111 5688999999965 88999
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc-ccccHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV-DFVGIEY 161 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~-d~~g~~~ 161 (192)
+++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.. ++.+.+.+..+- .+ |++|...
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~d~v~~~~g~~~ 238 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---KFSEDVKKLGGADVVIELVGSPT 238 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---HHHHHHHhccCCCEEEECCChHH
Confidence 999999999999999999999999999999999999999998 89988887654 355555544311 22 8999888
Q ss_pred HHHHHHhhcCCCe-EEEeeCC
Q 029543 162 CRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 162 ~~~~~~~l~~~G~-v~~G~~~ 181 (192)
...++++++++|+ +.+|...
T Consensus 239 ~~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 239 IEESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred HHHHHHHhhcCCEEEEEcCCC
Confidence 8999999999994 5676543
No 105
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.56 E-value=1e-13 Score=112.24 Aligned_cols=156 Identities=21% Similarity=0.231 Sum_probs=114.6
Q ss_pred hhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEE
Q 029543 9 SKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVY 88 (192)
Q Consensus 9 ~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~Vl 88 (192)
..++|......|...+|.+++|+.++...+..-| ... ++..+...+++.++++++ +..++.+|++|+
T Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP-------~~~-----~~~~aa~~~~~~~a~~~l-~~~~~~~g~~vl 164 (334)
T cd08234 98 RPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIP-------DNL-----SFEEAALAEPLSCAVHGL-DLLGIKPGDSVL 164 (334)
T ss_pred ChhhCCCcceeccCCCCcceeEEEecHHHcEECc-------CCC-----CHHHHhhhhHHHHHHHHH-HhcCCCCCCEEE
Confidence 3455555554555567889999999887655222 210 010111134778999998 778999999999
Q ss_pred EeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----cccc-HHHH
Q 029543 89 VSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVG-IEYC 162 (192)
Q Consensus 89 V~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g-~~~~ 162 (192)
|+| +|.+|.+++++|++.|++ |+++++++++.+.++ ++|++.++++.+. ++.+. +...+.++ |++| ....
T Consensus 165 I~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~ 240 (334)
T cd08234 165 VFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTL 240 (334)
T ss_pred EEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-CHHHH-HHhcCCCCcEEEECCCChHHH
Confidence 998 799999999999999996 899999999999998 9999988888765 55544 32222244 8887 5688
Q ss_pred HHHHHhhcCCCe-EEEeeCC
Q 029543 163 RSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 163 ~~~~~~l~~~G~-v~~G~~~ 181 (192)
..++++++++|+ +.+|...
T Consensus 241 ~~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 241 EQAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred HHHHHHHhcCCEEEEEecCC
Confidence 899999999995 5777654
No 106
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.56 E-value=5.4e-14 Score=113.39 Aligned_cols=155 Identities=19% Similarity=0.146 Sum_probs=108.9
Q ss_pred chhhhhhhhccccc-cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCE
Q 029543 8 TSKRLCKIQNILKQ-NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEY 86 (192)
Q Consensus 8 g~~~~C~~~~~~g~-~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~ 86 (192)
+..+.|...+..+. ..+|++++|+.++...+. .+|+.. ++..+....+..++++.+ +..++.+|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-------~lP~~~-----~~~~aa~~~~~~~~~~~~-~~~~~~~g~~ 158 (319)
T cd08242 92 GLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLH-------VVPDLV-----PDEQAVFAEPLAAALEIL-EQVPITPGDK 158 (319)
T ss_pred cCcccCCCCcccCccCCCCceEEEEEechHHeE-------ECcCCC-----CHHHhhhhhHHHHHHHHH-HhcCCCCCCE
Confidence 33455665555554 357888999999876554 233221 011111013556677666 7788999999
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccH-HH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGI-EY 161 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~-~~ 161 (192)
|+|+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++.+++++++ ..+.++ |++|+ ..
T Consensus 159 vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---------~~~~~~d~vid~~g~~~~ 227 (319)
T cd08242 159 VAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAE---------SEGGGFDVVVEATGSPSG 227 (319)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCcccc---------ccCCCCCEEEECCCChHH
Confidence 99998 899999999999999999999999999999999 8999988776431 111133 89985 58
Q ss_pred HHHHHHhhcCCCeE-EEeeCCCCCcc
Q 029543 162 CRSLLLVLLFRPLK-IMENDSGSTPI 186 (192)
Q Consensus 162 ~~~~~~~l~~~G~v-~~G~~~~~~~~ 186 (192)
+..++++++++|++ .++.......+
T Consensus 228 ~~~~~~~l~~~g~~v~~~~~~~~~~~ 253 (319)
T cd08242 228 LELALRLVRPRGTVVLKSTYAGPASF 253 (319)
T ss_pred HHHHHHHhhcCCEEEEEcccCCCCcc
Confidence 88999999999954 55544333333
No 107
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.56 E-value=1.5e-13 Score=108.04 Aligned_cols=114 Identities=27% Similarity=0.324 Sum_probs=99.2
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeeecCCcccH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF--DDAFNYKEEPDL 142 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~ 142 (192)
.+++.|+|+++.+...+.+|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|+ +.++++.+. ++
T Consensus 86 ~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~ 163 (288)
T smart00829 86 PVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SF 163 (288)
T ss_pred hHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cH
Confidence 5688899999877788999999999999999999999999999999999999999999998 9998 788888776 78
Q ss_pred HHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 143 DVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 143 ~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
.+.+++...+ ++ |++|+.....++++++++|. +.+|..
T Consensus 164 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~ 207 (288)
T smart00829 164 ADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKR 207 (288)
T ss_pred HHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCc
Confidence 7778776654 44 88888888999999999994 567754
No 108
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.55 E-value=1.7e-13 Score=107.79 Aligned_cols=115 Identities=26% Similarity=0.310 Sum_probs=99.6
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CCeeeecCCcccH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG--FDDAFNYKEEPDL 142 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g--~~~vi~~~~~~~~ 142 (192)
+++..|+|+++.+..++++|++|+|+|++|++|++++|+++..|++|+.+++++++.+.++ +++ ++.++++... ++
T Consensus 90 ~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~ 167 (293)
T cd05195 90 PVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SF 167 (293)
T ss_pred hHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hH
Confidence 5788999999877788999999999998999999999999999999999999999999998 887 7888887766 78
Q ss_pred HHHHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 143 DVALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 143 ~~~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+++.+.+ ++ |++|+..++.++++++++|+ +.+|...
T Consensus 168 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 168 ADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred HHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccc
Confidence 8888877654 55 89998899999999999995 5677644
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.55 E-value=1.2e-12 Score=105.14 Aligned_cols=113 Identities=27% Similarity=0.392 Sum_probs=94.6
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
.+++.++++++.+..++.+|++|+|+|++|++|++++++++..|++|+.+. ++++.+.++ ++|++.+++.... ++.+
T Consensus 123 ~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 199 (325)
T cd08271 123 PCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCE 199 (325)
T ss_pred hhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHH
Confidence 567889999987778889999999999889999999999999999988887 778888887 8999999987766 6777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
.+++...+ ++ |++++.....++++++++|+ +.+|..
T Consensus 200 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 200 RIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred HHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCC
Confidence 77776654 55 78887777789999999995 456543
No 110
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.55 E-value=1.7e-13 Score=111.56 Aligned_cols=159 Identities=13% Similarity=0.088 Sum_probs=116.4
Q ss_pred ccchhhhhhhhccccc----cCCCCCCCeEEEEEE--EeeeChhhhhhhcccCCC-cccccCCCCCchhHHHHHHHHHHH
Q 029543 6 RNTSKRLCKIQNILKQ----NAAEGSKDTVLLKNL--YLSCDPYMQKRMSKLDTS-LFYSFCPGGVIMPSVTAFAGLYEI 78 (192)
Q Consensus 6 ~~g~~~~C~~~~~~g~----~~~g~~~~~vlv~~~--~~~v~p~~~~~~~~~~~~-~~~~~~~g~~~~~~~ta~~~l~~~ 78 (192)
+++..+.|++....|. ...|.+++|+.++.. .+. .+|..... ....+ +++++|||+++. .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-------~~p~~l~~~~a~~l-----~~~~~ta~~~~~-~ 162 (344)
T cd08284 96 RRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLL-------KLPDGLSDEAALLL-----GDILPTGYFGAK-R 162 (344)
T ss_pred hCcCcccCCCCccccccccCCCCCceeEEEEcccccCceE-------ECCCCCCHHHhhhh-----cCchHHHHhhhH-h
Confidence 3455566665444422 125788899999863 333 22221000 11112 568999999994 5
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccC-Cc--
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLC-WV-- 154 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-g~-- 154 (192)
.++.+|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++ +++.+.. ++.+.+.+.+++ ++
T Consensus 163 ~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~~~~l~~~~~~~~~dv 238 (344)
T cd08284 163 AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFEDA-EPVERVREATEGRGADV 238 (344)
T ss_pred cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecCCc-CHHHHHHHHhCCCCCCE
Confidence 7888999999997 89999999999999997 8999998899999988 89985 5677665 787888877654 55
Q ss_pred --ccccH-HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 155 --DFVGI-EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 155 --d~~g~-~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
|++|+ .....++++++++|+ +.+|...
T Consensus 239 vid~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 239 VLEAVGGAAALDLAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred EEECCCCHHHHHHHHHhcccCCEEEEECcCC
Confidence 88884 688999999999995 5777654
No 111
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.55 E-value=1.1e-12 Score=105.68 Aligned_cols=113 Identities=21% Similarity=0.181 Sum_probs=86.8
Q ss_pred chhHHHHHHHHH--HHhCCC-CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCccc
Q 029543 65 IMPSVTAFAGLY--EICSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 141 (192)
Q Consensus 65 ~~~~~ta~~~l~--~~~~~~-~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 141 (192)
+.+++++++++. +..... ++++|+|+|++|++|++++|+|+++|++|++++.+++|.+.++ ++|+++++++++.
T Consensus 125 ~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-- 201 (324)
T cd08288 125 GTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-- 201 (324)
T ss_pred hhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh--
Confidence 345666665553 123444 5789999998899999999999999999999999999999998 9999999987642
Q ss_pred HHHHHHhhccCC----cccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 142 LDVALKRMFLCW----VDFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 142 ~~~~i~~~~~~g----~d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
...++..+..+ +|++|+..+..++..++.+|. +.+|...
T Consensus 202 -~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~ 245 (324)
T cd08288 202 -SEPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAG 245 (324)
T ss_pred -hHhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecC
Confidence 22444444333 399998778888899999884 5777653
No 112
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.54 E-value=9.5e-13 Score=105.19 Aligned_cols=155 Identities=24% Similarity=0.174 Sum_probs=112.9
Q ss_pred hccccccCCCCCCCeEEEEEEEeeeChhhhhhhc--------ccC--------CCcccccCCCCC---------------
Q 029543 16 QNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMS--------KLD--------TSLFYSFCPGGV--------------- 64 (192)
Q Consensus 16 ~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~--------~~~--------~~~~~~~~~g~~--------------- 64 (192)
.+....+.|...+++++|++.++++|+.+..... +.. ++....|..|+.
T Consensus 14 ~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~ 93 (305)
T cd08270 14 LRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVA 93 (305)
T ss_pred eEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEE
Confidence 4444566777778999999999999985432210 000 111112222221
Q ss_pred ---------------------chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 029543 65 ---------------------IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL 123 (192)
Q Consensus 65 ---------------------~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~ 123 (192)
++++.|||+++.+.... +|++|+|+|++|++|.+++++++..|++|+.+++++++.+.
T Consensus 94 v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 172 (305)
T cd08270 94 VPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172 (305)
T ss_pred EchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 56778999998655444 69999999988999999999999999999999999999999
Q ss_pred HHHhcCCCeeeecCCcccHHHHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 124 LKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 124 ~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
++ ++|++.+++... ++ ..+++ |++|+..+..++++++++|+ +.+|...
T Consensus 173 ~~-~~g~~~~~~~~~--~~-------~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 225 (305)
T cd08270 173 LR-ELGAAEVVVGGS--EL-------SGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSS 225 (305)
T ss_pred HH-HcCCcEEEeccc--cc-------cCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccC
Confidence 99 899987664332 11 11123 99998889999999999995 6788654
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.54 E-value=2e-12 Score=103.58 Aligned_cols=115 Identities=28% Similarity=0.303 Sum_probs=98.5
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.|+|+++.+...+.+|++++|+|++|++|.+++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+
T Consensus 121 ~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 198 (325)
T TIGR02824 121 PETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVE 198 (325)
T ss_pred hHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHH
Confidence 5677899998777888999999999999999999999999999999999999999999997 8999888887765 6777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.++....+ ++ |++|+..+..++++++++|+ +.+|...
T Consensus 199 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 199 VVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQG 241 (325)
T ss_pred HHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCC
Confidence 77766654 45 88888888899999999995 5677643
No 114
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.53 E-value=1.6e-13 Score=111.45 Aligned_cols=157 Identities=17% Similarity=0.157 Sum_probs=111.6
Q ss_pred cchhhhhhhhccccc-----cCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCC
Q 029543 7 NTSKRLCKIQNILKQ-----NAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSP 81 (192)
Q Consensus 7 ~g~~~~C~~~~~~g~-----~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~ 81 (192)
.|..+.|++....+. ..+|++++|+.++...+.. +|... ++.......+++++|+++.+....
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~-------iP~~~-----~~~~aa~~~~~~~a~~~l~~~~~~ 164 (339)
T cd08232 97 AGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVP-------LPDGL-----SLRRAALAEPLAVALHAVNRAGDL 164 (339)
T ss_pred CcCcccCccccceeeccccCCCCCceeeEEEechHHeEE-------CcCCC-----CHHHhhhcchHHHHHHHHHhcCCC
Confidence 355566776544442 2468899999999876552 23221 011111145888999998655555
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----cc
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DF 156 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~ 156 (192)
++++|+|.| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++++++++++ ++.+ ... ..+++ |+
T Consensus 165 -~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~~~~-~~~-~~~~vd~vld~ 238 (339)
T cd08232 165 -AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-PLAA-YAA-DKGDFDVVFEA 238 (339)
T ss_pred -CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-hhhh-hhc-cCCCccEEEEC
Confidence 899999987 79999999999999999 8999999999999888 8999999988765 4322 111 11234 88
Q ss_pred ccH-HHHHHHHHhhcCCCe-EEEeeCC
Q 029543 157 VGI-EYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 157 ~g~-~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+|+ ..++..+++|+++|+ +.+|...
T Consensus 239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~ 265 (339)
T cd08232 239 SGAPAALASALRVVRPGGTVVQVGMLG 265 (339)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence 884 688999999999995 5677544
No 115
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.53 E-value=2.1e-13 Score=110.28 Aligned_cols=152 Identities=15% Similarity=0.110 Sum_probs=116.4
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
++.++.++|...+..++..+|.+.+|+.++...+..-|... +.. ....+ ++++.|||+++ +.++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~---~~~---~~~~~-----~~~~~ta~~~~-~~~~~~~~ 168 (329)
T cd08298 101 CRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDY---DDE---EAAPL-----LCAGIIGYRAL-KLAGLKPG 168 (329)
T ss_pred HhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCC---CHH---HhhHh-----hhhhHHHHHHH-HhhCCCCC
Confidence 34567788988888888778999999999987665222111 000 01112 66899999999 88899999
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----cccc-H
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVG-I 159 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g-~ 159 (192)
++|+|+| +|++|+++++++++.|++|+++++++++.+.++ ++|++.+++.... ...++ ++.+ +
T Consensus 169 ~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~----------~~~~vD~vi~~~~~~ 236 (329)
T cd08298 169 QRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDDL----------PPEPLDAAIIFAPVG 236 (329)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCcc----------CCCcccEEEEcCCcH
Confidence 9999998 899999999999999999999999999999998 9999888876532 11123 5544 5
Q ss_pred HHHHHHHHhhcCCCe-EEEeeC
Q 029543 160 EYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
..++.++++++++|+ +.+|..
T Consensus 237 ~~~~~~~~~l~~~G~~v~~g~~ 258 (329)
T cd08298 237 ALVPAALRAVKKGGRVVLAGIH 258 (329)
T ss_pred HHHHHHHHHhhcCCEEEEEcCC
Confidence 688999999999995 566643
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.52 E-value=2.8e-12 Score=102.90 Aligned_cols=115 Identities=30% Similarity=0.275 Sum_probs=98.4
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.++|+++.+...+.++++++|+|++|++|+.++++++..|++++.+++++++.+.++ ++|.+.+++.... ++.+
T Consensus 126 ~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 203 (328)
T cd08268 126 WMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVA 203 (328)
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHH
Confidence 5678899999877788889999999999999999999999999999999999999999998 8999888888766 7777
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+.+.+ ++ +++|+.....++++++++|+ +.+|...
T Consensus 204 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 246 (328)
T cd08268 204 EVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALS 246 (328)
T ss_pred HHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCC
Confidence 77766654 45 88888888999999999995 5677643
No 117
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.52 E-value=3e-12 Score=102.73 Aligned_cols=112 Identities=24% Similarity=0.291 Sum_probs=94.4
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
+.++.+||+++.+..++.+|++++|+|++|++|++++++++..|++|+.++++ ++.+.++ ++|++.+++... .+.+
T Consensus 126 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~ 201 (326)
T cd08272 126 PLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVE 201 (326)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHH
Confidence 45678889888778899999999999999999999999999999999999988 8999998 899988888654 3666
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
.+.+.+.+ ++ |++|+.....++++++++|+ +.+|..
T Consensus 202 ~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 243 (326)
T cd08272 202 YVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGG 243 (326)
T ss_pred HHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecC
Confidence 67776654 55 88888888889999999994 566654
No 118
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.51 E-value=3.9e-13 Score=109.31 Aligned_cols=143 Identities=18% Similarity=0.087 Sum_probs=104.2
Q ss_pred CCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHH
Q 029543 23 AAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQ 102 (192)
Q Consensus 23 ~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q 102 (192)
.+|.+++|+.++...+. .+|+.. ++..+..+.++++||+++ ..+++++|++|+|+| +|++|.+++|
T Consensus 114 ~~g~~~~~~~v~~~~~~-------~lP~~~-----s~~~a~~~~~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~ 179 (341)
T cd08262 114 APGGYAEYMLLSEALLL-------RVPDGL-----SMEDAALTEPLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIA 179 (341)
T ss_pred CCCceeeeEEechHHeE-------ECCCCC-----CHHHhhhhhhHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHH
Confidence 35677888888776544 222211 011111255888999996 778999999999998 6999999999
Q ss_pred HHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH---HHHhhccC-Cc----ccccH-HHHHHHHHhhcCC
Q 029543 103 FAKLAGCH-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV---ALKRMFLC-WV----DFVGI-EYCRSLLLVLLFR 172 (192)
Q Consensus 103 ~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~---~i~~~~~~-g~----d~~g~-~~~~~~~~~l~~~ 172 (192)
+|+.+|++ ++++++++++.+.++ ++|++++++++++ +..+ .+.+...+ ++ |++|+ ..+..++++++++
T Consensus 180 la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 257 (341)
T cd08262 180 ALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG 257 (341)
T ss_pred HHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 99999995 778888899999998 9999999987654 3322 23333333 44 88886 4788999999999
Q ss_pred Ce-EEEeeCC
Q 029543 173 PL-KIMENDS 181 (192)
Q Consensus 173 G~-v~~G~~~ 181 (192)
|+ +.+|...
T Consensus 258 g~~v~~g~~~ 267 (341)
T cd08262 258 GRIVVVGVCM 267 (341)
T ss_pred CEEEEECCCC
Confidence 95 5777653
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.51 E-value=4.4e-12 Score=101.41 Aligned_cols=115 Identities=30% Similarity=0.339 Sum_probs=99.1
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
..++.+||+++.+...+.++++|+|+|++|++|++++++++..|++|+.+++++++.+.++ ++|++.+++.... ++.+
T Consensus 121 ~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~ 198 (323)
T cd08241 121 PVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRE 198 (323)
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHH
Confidence 4677888888866788899999999998899999999999999999999999999999998 8999888887776 7888
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+.+.+ ++ |++|+.....++++++++|+ +.+|...
T Consensus 199 ~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~ 241 (323)
T cd08241 199 RVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFAS 241 (323)
T ss_pred HHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCC
Confidence 88877665 55 88888888899999999995 5777644
No 120
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.50 E-value=2.6e-13 Score=120.96 Aligned_cols=115 Identities=24% Similarity=0.242 Sum_probs=102.3
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeeecCCccc
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPD 141 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~ 141 (192)
++.+.|+|++|..++.+++|+++||++++||+|++++.+|.+.|++|+.++.|.+|++++++.| ...++-|.++. +
T Consensus 1534 P~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-s 1612 (2376)
T KOG1202|consen 1534 PVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-S 1612 (2376)
T ss_pred ceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-c
Confidence 8899999999999999999999999999999999999999999999999999999999998544 34567788888 9
Q ss_pred HHHHHHhhccC-Cccc----ccHHHHHHHHHhhcCCCe-EEEeeC
Q 029543 142 LDVALKRMFLC-WVDF----VGIEYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 142 ~~~~i~~~~~~-g~d~----~g~~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
|+..+..+|++ |+|. ...+.++.+++||..+|+ +-+|-.
T Consensus 1613 FEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKf 1657 (2376)
T KOG1202|consen 1613 FEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKF 1657 (2376)
T ss_pred HHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecce
Confidence 99999999998 8854 456799999999999995 577753
No 121
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.49 E-value=6.8e-13 Score=107.37 Aligned_cols=157 Identities=20% Similarity=0.157 Sum_probs=115.9
Q ss_pred cccchhhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCC
Q 029543 5 IRNTSKRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKG 84 (192)
Q Consensus 5 ~~~g~~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g 84 (192)
++.+..++|++....+....|++++++.++...+..-|... +.. ....+ .+++.|||+++. ..++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~---~~~---~~~~l-----~~~~~ta~~~l~-~~~~~~~ 163 (330)
T cd08245 96 CRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGL---PLA---QAAPL-----LCAGITVYSALR-DAGPRPG 163 (330)
T ss_pred hhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCC---CHH---Hhhhh-----hhhHHHHHHHHH-hhCCCCC
Confidence 45667778888766666557889999999876554222111 000 00111 568899999994 4789999
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc----cccc-H
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV----DFVG-I 159 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~----d~~g-~ 159 (192)
++|+|+| +|++|++++++|+..|++|+++++++++.+.++ ++|++.+++..+. +.... ..+++ |+++ .
T Consensus 164 ~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~----~~~~~d~vi~~~~~~ 236 (330)
T cd08245 164 ERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-LDEQA----AAGGADVILVTVVSG 236 (330)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-chHHh----ccCCCCEEEECCCcH
Confidence 9999997 788999999999999999999999999999998 8999988887654 33332 11223 8877 5
Q ss_pred HHHHHHHHhhcCCCe-EEEeeC
Q 029543 160 EYCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 160 ~~~~~~~~~l~~~G~-v~~G~~ 180 (192)
.....++++++++|+ +.+|..
T Consensus 237 ~~~~~~~~~l~~~G~~i~~~~~ 258 (330)
T cd08245 237 AAAEAALGGLRRGGRIVLVGLP 258 (330)
T ss_pred HHHHHHHHhcccCCEEEEECCC
Confidence 688999999999995 567654
No 122
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.48 E-value=7.2e-12 Score=101.22 Aligned_cols=112 Identities=28% Similarity=0.293 Sum_probs=89.4
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.++|+++.+..++.+|++|+|+|++|++|++++++++..|++|+.+++ +++.+.++ ++|++. ++.... ++.+
T Consensus 121 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~ 196 (331)
T cd08273 121 VLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLP 196 (331)
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhh
Confidence 5677899999877778999999999998899999999999999999999997 88889998 899754 455444 4443
Q ss_pred HHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 145 ALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 145 ~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
. ....+++ |++|+.....++++++++|+ +.+|....
T Consensus 197 ~--~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~ 237 (331)
T cd08273 197 A--MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSS 237 (331)
T ss_pred h--hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCC
Confidence 3 2222344 89998889999999999995 57776543
No 123
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.44 E-value=2.4e-11 Score=96.64 Aligned_cols=110 Identities=26% Similarity=0.384 Sum_probs=89.6
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
.+++.++|+++.+..++.+|++|+|+|++|++|++++++++..|++|+.+++++ +.+.++ ++|++.+++.... ++.+
T Consensus 126 ~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~ 202 (309)
T cd05289 126 PLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER 202 (309)
T ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh
Confidence 456778888886666789999999999889999999999999999999998877 888887 8999888887765 4443
Q ss_pred HHHhhccC-Cc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+.+ ++ |++|+.....++++++++|. +.+|...
T Consensus 203 ----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 241 (309)
T cd05289 203 ----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPP 241 (309)
T ss_pred ----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCC
Confidence 2222 34 89998888999999999995 5677543
No 124
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.42 E-value=5.1e-11 Score=96.17 Aligned_cols=114 Identities=28% Similarity=0.346 Sum_probs=92.3
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD 143 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 143 (192)
.++++++|+++.+..++.+|++|+|+|++|++|++++++|+.. +..++... .+++.++++ ++|++.+++.... ++.
T Consensus 120 ~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~ 196 (337)
T cd08275 120 PVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYV 196 (337)
T ss_pred hHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHH
Confidence 4688899999877888999999999998899999999999998 43443332 466888887 8999999988776 788
Q ss_pred HHHHhhccCCc----ccccHHHHHHHHHhhcCCCe-EEEeeCC
Q 029543 144 VALKRMFLCWV----DFVGIEYCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 144 ~~i~~~~~~g~----d~~g~~~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+.+++.+.+++ |++|+.....++++++++|+ +.+|...
T Consensus 197 ~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 239 (337)
T cd08275 197 EEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAAN 239 (337)
T ss_pred HHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecC
Confidence 88877664444 89998888999999999995 6777653
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.41 E-value=3.5e-11 Score=96.38 Aligned_cols=111 Identities=26% Similarity=0.311 Sum_probs=85.8
Q ss_pred chhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHH
Q 029543 65 IMPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDV 144 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 144 (192)
++++.+||+++.+..++.+|++|+|+|++|++|++++++|+..|++|++++++ ++.+.++ ++|++.+++.... ++.
T Consensus 125 ~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~- 200 (319)
T cd08267 125 PVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV- 200 (319)
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc-
Confidence 46788999999777778999999999988999999999999999999999865 8888888 9999888887654 443
Q ss_pred HHHhhccC-Cc----ccccHH--HHHHHHHhhcCCCe-EEEeeCC
Q 029543 145 ALKRMFLC-WV----DFVGIE--YCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 145 ~i~~~~~~-g~----d~~g~~--~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+..+.+ ++ |++|+. .....+..++++|+ +.+|...
T Consensus 201 --~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 201 --ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred --hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 223333 44 788743 33444445999995 6777654
No 126
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.34 E-value=3.3e-11 Score=98.54 Aligned_cols=111 Identities=23% Similarity=0.192 Sum_probs=86.4
Q ss_pred chhHHHHHHHHHHHh-CCCCCCEEEEeCCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCccc
Q 029543 65 IMPSVTAFAGLYEIC-SPKKGEYVYVSAASGAVGQLVGQFAKLA-GC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 141 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~-~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 141 (192)
++++.|+|+++.+.. ++.+|++|+|+|++|++|++++|+|+++ +. +|+.++ ++++.+.++ ++|++.++++++. +
T Consensus 132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~ 208 (352)
T cd08247 132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-S 208 (352)
T ss_pred HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-c
Confidence 557889999996666 7999999999999999999999999987 55 677776 566667777 9999999987765 4
Q ss_pred ---HHHHHHhhcc-C-Cc----ccccH-HHHHHHHHhhc---CCCe-EEEe
Q 029543 142 ---LDVALKRMFL-C-WV----DFVGI-EYCRSLLLVLL---FRPL-KIME 178 (192)
Q Consensus 142 ---~~~~i~~~~~-~-g~----d~~g~-~~~~~~~~~l~---~~G~-v~~G 178 (192)
+...+.+.+. + ++ |++|+ .....++++++ ++|+ +.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 209 GVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred ccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 4444444332 3 55 89987 68888999999 9994 5454
No 127
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.29 E-value=3.7e-11 Score=94.95 Aligned_cols=106 Identities=25% Similarity=0.222 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcC-CCeeeecCCcccHH
Q 029543 66 MPSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVDLLKNKFG-FDDAFNYKEEPDLD 143 (192)
Q Consensus 66 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~ 143 (192)
+++.|||+++ ...++.+|++++|+| +|++|++++++|+.+|++ |+++++++++.+.++ ++| ++.+++.... .
T Consensus 81 ~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~- 154 (277)
T cd08255 81 ALAATALNGV-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--E- 154 (277)
T ss_pred HHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--h-
Confidence 5789999998 578899999999998 799999999999999997 999999999999888 899 5555543321 1
Q ss_pred HHHHhhccCCc----cccc-HHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 144 VALKRMFLCWV----DFVG-IEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 144 ~~i~~~~~~g~----d~~g-~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
....++ |+++ ......++++++++|+ +.+|..+.
T Consensus 155 -----~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~ 194 (277)
T cd08255 155 -----IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGL 194 (277)
T ss_pred -----hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCC
Confidence 111133 7877 5688899999999995 57776543
No 128
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.09 E-value=1.2e-09 Score=93.03 Aligned_cols=98 Identities=14% Similarity=0.053 Sum_probs=74.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCCcc------------cHHHHHH
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEP------------DLDVALK 147 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~~~------------~~~~~i~ 147 (192)
..++++|+|+| +|++|+++++.|+.+|++|+++|+++++++.++ ++|++.+ +|..+++ ++.+..+
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35799999999 899999999999999999999999999999999 9999854 6653320 2222222
Q ss_pred hh-cc--CCc----ccccHH------H-HHHHHHhhcCCCe-EEEeeC
Q 029543 148 RM-FL--CWV----DFVGIE------Y-CRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 148 ~~-~~--~g~----d~~g~~------~-~~~~~~~l~~~G~-v~~G~~ 180 (192)
+. .+ .++ +++|.+ . .+++++.+|++|+ +.+|..
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 22 21 123 788742 4 5999999999995 577875
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.90 E-value=2e-08 Score=83.68 Aligned_cols=107 Identities=13% Similarity=0.053 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhCC-CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHH
Q 029543 69 VTAFAGLYEICSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALK 147 (192)
Q Consensus 69 ~ta~~~l~~~~~~-~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~ 147 (192)
-..+.++.+..++ .+|++|+|.| .|++|+.+++.+|.+|++|+++++++.|++.++ ++|++.+ + ..+.++
T Consensus 186 ~s~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-~------~~e~v~ 256 (413)
T cd00401 186 ESLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-T------MEEAVK 256 (413)
T ss_pred hhhHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-c------HHHHHc
Confidence 3445566454443 5899999999 899999999999999999999999999999999 9998533 1 222222
Q ss_pred hhccCCc-ccccHH-HHHHH-HHhhcCCCe-EEEeeCCCCCcccc
Q 029543 148 RMFLCWV-DFVGIE-YCRSL-LLVLLFRPL-KIMENDSGSTPIPF 188 (192)
Q Consensus 148 ~~~~~g~-d~~g~~-~~~~~-~~~l~~~G~-v~~G~~~~~~~~~~ 188 (192)
. .+-+ +++|.. .+... ++.++++|+ +.+|.. +.++++
T Consensus 257 ~--aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~ 297 (413)
T cd00401 257 E--GDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDV 297 (413)
T ss_pred C--CCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCH
Confidence 1 1212 899854 67765 999999995 577854 334544
No 130
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.39 E-value=5.3e-06 Score=69.51 Aligned_cols=107 Identities=13% Similarity=0.055 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhCCC-CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHH
Q 029543 68 SVTAFAGLYEICSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVAL 146 (192)
Q Consensus 68 ~~ta~~~l~~~~~~~-~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i 146 (192)
.-.+|.++.+...+. .|++|+|.| .|.+|+.+++.++.+|++|+++++++.+...+. ..|++ +. ++.+.+
T Consensus 195 ~~s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal 265 (425)
T PRK05476 195 GESLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAA 265 (425)
T ss_pred HhhhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHH
Confidence 344566664443444 899999999 899999999999999999999999988877776 66764 22 222222
Q ss_pred HhhccCCc-ccccHH-HHH-HHHHhhcCCCe-EEEeeCCCCCc
Q 029543 147 KRMFLCWV-DFVGIE-YCR-SLLLVLLFRPL-KIMENDSGSTP 185 (192)
Q Consensus 147 ~~~~~~g~-d~~g~~-~~~-~~~~~l~~~G~-v~~G~~~~~~~ 185 (192)
.. .+-+ +++|.. .+. ..++.++++++ +.+|....+..
T Consensus 266 ~~--aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid 306 (425)
T PRK05476 266 EL--GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEID 306 (425)
T ss_pred hC--CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccC
Confidence 21 1112 788854 555 67889999995 56776654433
No 131
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.28 E-value=4.5e-06 Score=64.31 Aligned_cols=65 Identities=23% Similarity=0.408 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeeecCCcccHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF----DDAFNYKEEPDLDVALK 147 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~ 147 (192)
.++.++|+||++|||..+++.....|++|+.+.|+.++++.+.++++. ...+|..+...+.+.+.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~ 73 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIE 73 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence 468899999999999999999999999999999999999999988883 23466665424333333
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.27 E-value=9e-06 Score=69.50 Aligned_cols=96 Identities=16% Similarity=0.128 Sum_probs=68.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCC-------------cccHHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKE-------------EPDLDVALK 147 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~-------------~~~~~~~i~ 147 (192)
.++++|+|.| +|.+|++++++++.+|++|+++++++++++.++ ++|++.+ ++..+ + ++.+...
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~-~~~~~~~ 238 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSE-EFIAAEM 238 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCH-HHHHHHH
Confidence 3578999999 899999999999999999999999999999999 8998763 34321 1 2332222
Q ss_pred hhcc----C-Cc--ccc---cH-H---HHHHHHHhhcCCCe-EEEeeC
Q 029543 148 RMFL----C-WV--DFV---GI-E---YCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 148 ~~~~----~-g~--d~~---g~-~---~~~~~~~~l~~~G~-v~~G~~ 180 (192)
+... + .+ +++ |. . ..+..++.+|+|+. |-++..
T Consensus 239 ~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 239 ELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 2222 2 22 555 53 2 67788999999995 445443
No 133
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.23 E-value=1.9e-05 Score=65.86 Aligned_cols=101 Identities=15% Similarity=0.096 Sum_probs=70.4
Q ss_pred HHHHHHHHHhC-CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHh
Q 029543 70 TAFAGLYEICS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKR 148 (192)
Q Consensus 70 ta~~~l~~~~~-~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 148 (192)
.++.++.+..+ ...|++|+|.| .|.+|+.+++.++.+|++|+++++++.+...++ ..|+. +. +..+.++.
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~~ 250 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAKI 250 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHhc
Confidence 34455534433 36899999999 999999999999999999999999988877777 67763 32 12222221
Q ss_pred hccCC-cccccHH-HHH-HHHHhhcCCCe-EEEeeCC
Q 029543 149 MFLCW-VDFVGIE-YCR-SLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 149 ~~~~g-~d~~g~~-~~~-~~~~~l~~~G~-v~~G~~~ 181 (192)
.+- ++++|.. .+. ..+..++++++ +.+|...
T Consensus 251 --aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 251 --GDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred --CCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 121 2778854 455 48889999995 4666553
No 134
>PLN02494 adenosylhomocysteinase
Probab=98.22 E-value=1.8e-05 Score=66.84 Aligned_cols=99 Identities=13% Similarity=0.044 Sum_probs=71.9
Q ss_pred HHHHHHHhCC-CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhc
Q 029543 72 FAGLYEICSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMF 150 (192)
Q Consensus 72 ~~~l~~~~~~-~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 150 (192)
+.++.+..++ ..|++|+|.| .|.||+.+++.++.+|++|+++++++.+...+. ..|+..+ ++.+.++..
T Consensus 241 ~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~vv-------~leEal~~A- 310 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQVL-------TLEDVVSEA- 310 (477)
T ss_pred HHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCeec-------cHHHHHhhC-
Confidence 5556454444 5799999999 999999999999999999999999988777777 7777532 232333221
Q ss_pred cCCc-ccccHH--HHHHHHHhhcCCCe-EEEeeCC
Q 029543 151 LCWV-DFVGIE--YCRSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 151 ~~g~-d~~g~~--~~~~~~~~l~~~G~-v~~G~~~ 181 (192)
+-+ ++.|.. .....++.|+++++ +.+|...
T Consensus 311 -DVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 311 -DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred -CEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 212 777754 35889999999995 5777643
No 135
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.20 E-value=1.8e-05 Score=62.24 Aligned_cols=48 Identities=19% Similarity=0.329 Sum_probs=42.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
..+.+++|+||++|||...+......|.+++.+.|+++|++.+.+++.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~ 51 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELE 51 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHH
Confidence 467899999999999999998888899999999999999999876553
No 136
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.05 E-value=3.4e-05 Score=58.03 Aligned_cols=69 Identities=13% Similarity=0.181 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeeecCCcc---cHHHHHHhhcc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF--DDAFNYKEEP---DLDVALKRMFL 151 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~--~~vi~~~~~~---~~~~~i~~~~~ 151 (192)
-|.+|||+|+++|||+.+++-....|-+||++.|++++++.+++.... ..+.|..+.+ .+.+.+++..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC
Confidence 478999999999999999988888999999999999999999843321 2455655441 25555555433
No 137
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.00 E-value=6.2e-05 Score=59.70 Aligned_cols=107 Identities=18% Similarity=0.309 Sum_probs=69.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e----eecCCcccHHHHHHh---hcc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKN---KFGFDD-A----FNYKEEPDLDVALKR---MFL 151 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~-v----i~~~~~~~~~~~i~~---~~~ 151 (192)
.|+.|+|+||++|||..++.-....|++++.++|+.++++.+.+ +.+... + .|..++++..+.+.+ ..+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 58999999999999998876666689999999888888777732 333322 2 344444233333321 111
Q ss_pred C--------Cc--------------------ccccH-HHHHHHHHhhcCC--C-eEEEeeCCCCCccccc
Q 029543 152 C--------WV--------------------DFVGI-EYCRSLLLVLLFR--P-LKIMENDSGSTPIPFA 189 (192)
Q Consensus 152 ~--------g~--------------------d~~g~-~~~~~~~~~l~~~--G-~v~~G~~~~~~~~~~~ 189 (192)
+ |+ +..|. .....++..|++. | +|+++...|..++|+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 1 11 13342 3567788888876 7 4688888888777764
No 138
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.94 E-value=0.00041 Score=55.78 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=65.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc-ccccHH-
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV-DFVGIE- 160 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~-d~~g~~- 160 (192)
.+++|+|.| .|.+|+.+++.++.+|++|++.++++++.+.++ ++|++.+ .. + ++.+.+.+. +-+ +++...
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~--~-~l~~~l~~a--DiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HL--S-ELAEEVGKI--DIIFNTIPALV 222 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cH--H-HHHHHhCCC--CEEEECCChhh
Confidence 589999999 899999999999999999999999998888888 8887532 21 1 333333211 111 666544
Q ss_pred HHHHHHHhhcCCCe-EEEeeCCCCC
Q 029543 161 YCRSLLLVLLFRPL-KIMENDSGST 184 (192)
Q Consensus 161 ~~~~~~~~l~~~G~-v~~G~~~~~~ 184 (192)
..+..++.++++++ +-++...+..
T Consensus 223 i~~~~l~~~~~g~vIIDla~~pggt 247 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLASKPGGT 247 (296)
T ss_pred hhHHHHHcCCCCcEEEEEccCCCCc
Confidence 44566778888774 4455554443
No 139
>PRK08324 short chain dehydrogenase; Validated
Probab=97.94 E-value=0.00012 Score=65.33 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=41.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.|++++|+||+|+||+.+++.+...|++|+++++++++.+.+.++++.
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 578999999999999999999999999999999999887776645543
No 140
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.83 E-value=0.00017 Score=59.84 Aligned_cols=93 Identities=20% Similarity=0.179 Sum_probs=62.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc--ccc---c
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV--DFV---G 158 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~--d~~---g 158 (192)
+.+|+|.| +|.+|+.+++.++.+|++|+++++++++++.+.+.++.....+..+..++.+.+.+. .+ +++ |
T Consensus 167 ~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~a---DvVI~a~~~~g 242 (370)
T TIGR00518 167 PGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRA---DLLIGAVLIPG 242 (370)
T ss_pred CceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccC---CEEEEccccCC
Confidence 45699999 799999999999999999999999999988886456654322322221343333321 22 554 3
Q ss_pred H--H--HHHHHHHhhcCCCe-EEEeeC
Q 029543 159 I--E--YCRSLLLVLLFRPL-KIMEND 180 (192)
Q Consensus 159 ~--~--~~~~~~~~l~~~G~-v~~G~~ 180 (192)
. . .....++.++++++ +-++..
T Consensus 243 ~~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 243 AKAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 2 2 34778888999984 456644
No 141
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00014 Score=57.63 Aligned_cols=56 Identities=18% Similarity=0.345 Sum_probs=45.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~~ 139 (192)
.+++++|+||+|++|..+++.....|++|++++|++++++.+. +.+.+.+ +|..+.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~ 59 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEP 59 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCH
Confidence 4678999999999999999888888999999999999888887 6565433 465554
No 142
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.81 E-value=9.7e-05 Score=58.82 Aligned_cols=68 Identities=19% Similarity=0.371 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHH-HHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCC---eeeecCCcccHHHHHHhhcc
Q 029543 83 KGEYVYVSAASGAVGQ-LVGQFAKLAGCHVVGSAGSKEKVDLLKNK----FGFD---DAFNYKEEPDLDVALKRMFL 151 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~-~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~~ 151 (192)
.|+|.+|+||+.+||. ++-++|| +|.+|+.+.|+++|++.++++ .++. .++|..+++...+.+++...
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~ 123 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA 123 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc
Confidence 4799999999999997 5557887 899999999999999988744 3432 35787766233555555443
No 143
>PRK08017 oxidoreductase; Provisional
Probab=97.78 E-value=0.00016 Score=56.29 Aligned_cols=53 Identities=17% Similarity=0.339 Sum_probs=44.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCC
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKE 138 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~ 138 (192)
++++|+||+|++|..+++.....|++|++++|++++.+.++ +.+++.+ .|..+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~ 56 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDD 56 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCC
Confidence 57999999999999999988888999999999999988887 7776543 45544
No 144
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00027 Score=55.79 Aligned_cols=61 Identities=23% Similarity=0.342 Sum_probs=46.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCCcccHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDVAL 146 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i 146 (192)
++++|+||+|++|..+++.+...|++|++++|++++.+.+. ..+...+ .|..+.+++.+.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~ 63 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLA 63 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHH
Confidence 47999999999999999988888999999999988888776 5565433 5665542444333
No 145
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00033 Score=54.58 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=44.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD-AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-vi~~~~~ 139 (192)
.|++|+|+||+|++|..+++.....|++|+++++++.+.+.+.++++... ..|..++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~ 63 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDE 63 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCH
Confidence 57899999999999999998888889999999999887776653555432 3455544
No 146
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.68 E-value=9.8e-05 Score=64.48 Aligned_cols=69 Identities=13% Similarity=0.219 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHh--------------CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC---------------
Q 029543 67 PSVTAFAGLYEIC--------------SPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS--------------- 117 (192)
Q Consensus 67 ~~~ta~~~l~~~~--------------~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~--------------- 117 (192)
+..++++++.+.. ....|++|+|+| +|++|+++++.++..|++|+++++.
T Consensus 106 ~~~v~i~~l~r~~~~~~~~~~~~~~~~~~~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~ 184 (564)
T PRK12771 106 DDAVGINAVERFLGDYAIANGWKFPAPAPDTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYR 184 (564)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCCCCCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCcc
Confidence 4567788885431 367899999999 8999999999999999999999842
Q ss_pred ------HHHHHHHHHhcCCCeeeecC
Q 029543 118 ------KEKVDLLKNKFGFDDAFNYK 137 (192)
Q Consensus 118 ------~~~~~~~~~~~g~~~vi~~~ 137 (192)
+.+++.++ ++|++..++..
T Consensus 185 ~~~~~~~~~l~~~~-~~Gv~~~~~~~ 209 (564)
T PRK12771 185 LPREVLDAEIQRIL-DLGVEVRLGVR 209 (564)
T ss_pred CCHHHHHHHHHHHH-HCCCEEEeCCE
Confidence 45677788 89988776643
No 147
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00037 Score=55.79 Aligned_cols=47 Identities=17% Similarity=0.267 Sum_probs=41.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.|++++|+||+|++|..+++.....|++|+++++++++++.+.++++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~ 54 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG 54 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 57899999999999999999888899999999999988877764665
No 148
>PRK06182 short chain dehydrogenase; Validated
Probab=97.63 E-value=0.00042 Score=54.63 Aligned_cols=64 Identities=20% Similarity=0.368 Sum_probs=48.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCCcccHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDVALK 147 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~ 147 (192)
.+++++|+||+|++|..+++.+...|++|++++|++++++.+. ..+... ..|..+.+++.+.+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~ 66 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVD 66 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHH
Confidence 4678999999999999999888888999999999998887776 555543 356555424444343
No 149
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.62 E-value=0.00021 Score=56.81 Aligned_cols=99 Identities=25% Similarity=0.311 Sum_probs=58.3
Q ss_pred HHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCee--eecCCcccHHHHHHhh
Q 029543 75 LYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKN---KFGFDDA--FNYKEEPDLDVALKRM 149 (192)
Q Consensus 75 l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~v--i~~~~~~~~~~~i~~~ 149 (192)
+.+++++++|++||-+| +| -|.++..+|+..|++|++++.|++..+.+++ +.|...- +...+-.++......+
T Consensus 54 ~~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I 131 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI 131 (273)
T ss_dssp HHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred HHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence 44677899999999999 55 7888999999999999999999998888863 3454321 2111110222211111
Q ss_pred ccCCc-ccccH----HHHHHHHHhhcCCCeE
Q 029543 150 FLCWV-DFVGI----EYCRSLLLVLLFRPLK 175 (192)
Q Consensus 150 ~~~g~-d~~g~----~~~~~~~~~l~~~G~v 175 (192)
..=+. +.+|. ..++.+-+.|+|+|++
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~ 162 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRL 162 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEE
Confidence 00011 77773 3688888999999953
No 150
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00045 Score=54.40 Aligned_cols=57 Identities=11% Similarity=0.177 Sum_probs=43.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-CCe-eeecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG-FDD-AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g-~~~-vi~~~~~ 139 (192)
.+.+++|+||+|++|..+++.....|++|++++|++++++.+.++++ ... ..|..+.
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~ 62 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDP 62 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCH
Confidence 36799999999999999998777889999999999988776653555 222 2455544
No 151
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.57 E-value=0.00049 Score=53.92 Aligned_cols=47 Identities=21% Similarity=0.375 Sum_probs=41.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.+++++|+||+|+||..+++.+...|++|++++|++++.+.+.++++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG 51 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 57899999999999999998888889999999999988887764554
No 152
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.00015 Score=61.43 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=66.0
Q ss_pred HhCCCCCCEEE----EeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCCcccHHHHHHhhccC
Q 029543 78 ICSPKKGEYVY----VSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDVALKRMFLC 152 (192)
Q Consensus 78 ~~~~~~g~~Vl----V~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~ 152 (192)
..++++|++++ |+||+|++|..++|+++..|++|+++.+.+++....+ ..+.+ .++|.+.. ...+.+...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~--- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKAL--- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHH---
Confidence 34667889888 8888999999999999999999999887766555544 45555 46666543 333333332
Q ss_pred CcccccHHHHHHHHHhhcCCCe-EEEeeCCC
Q 029543 153 WVDFVGIEYCRSLLLVLLFRPL-KIMENDSG 182 (192)
Q Consensus 153 g~d~~g~~~~~~~~~~l~~~G~-v~~G~~~~ 182 (192)
...++..++.|.++|+ +.++....
T Consensus 103 ------~~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 103 ------YEFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred ------HHHHHHHHHhccCCCEEEEEccccc
Confidence 1356677888888885 56665443
No 153
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.55 E-value=0.0015 Score=51.74 Aligned_cols=95 Identities=21% Similarity=0.182 Sum_probs=62.5
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeeecCCcccHHHHHHhhccCC
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--HVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDVALKRMFLCW 153 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~g 153 (192)
+.+.+|++||.+| +|+ |..+.++++..|. +|++++.+++.++.+++. .+.+.+ +.... ++.+ + ....+.
T Consensus 73 ~~~~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~~ 146 (272)
T PRK11873 73 AELKPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADNS 146 (272)
T ss_pred ccCCCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCCc
Confidence 5678999999999 777 9888888888765 699999999999998832 344332 11112 2221 1 111123
Q ss_pred cc-----cc-----c-HHHHHHHHHhhcCCCeE-EEee
Q 029543 154 VD-----FV-----G-IEYCRSLLLVLLFRPLK-IMEN 179 (192)
Q Consensus 154 ~d-----~~-----g-~~~~~~~~~~l~~~G~v-~~G~ 179 (192)
+| ++ . ...++.+++.|+|+|++ +.+.
T Consensus 147 fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~ 184 (272)
T PRK11873 147 VDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDV 184 (272)
T ss_pred eeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 32 22 2 34889999999999965 4443
No 154
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00064 Score=52.41 Aligned_cols=57 Identities=23% Similarity=0.368 Sum_probs=45.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD-AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-vi~~~~~ 139 (192)
.+++++|+|++|++|..+++.+...|++|++++|++++.+.+.+..+... ..|..+.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~ 65 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD 65 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH
Confidence 57899999999999999999998899999999999888777663555443 2455443
No 155
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.54 E-value=0.00065 Score=53.19 Aligned_cols=47 Identities=23% Similarity=0.290 Sum_probs=40.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.+++++|+||+|+||..+++.....|++|++++|++++++.+++..+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~ 50 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHG 50 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC
Confidence 47899999999999999998888889999999999888877763333
No 156
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.53 E-value=0.00034 Score=56.63 Aligned_cols=108 Identities=18% Similarity=0.177 Sum_probs=68.1
Q ss_pred chhHHHHHHHHHHHhCC----CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCCc
Q 029543 65 IMPSVTAFAGLYEICSP----KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFDDAFNYKEE 139 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~----~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~ 139 (192)
..+..++++++. .+.. .++++|+|.| +|.+|..+++.++..|+ +|++++|++++.+.+.+++|.+ +++. +
T Consensus 156 ~~~~sv~~~Av~-~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~ 230 (311)
T cd05213 156 RGAVSISSAAVE-LAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPL--D 230 (311)
T ss_pred CCCcCHHHHHHH-HHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeH--H
Confidence 456777777774 3332 3689999999 79999999999988887 8999999988865554488873 3332 1
Q ss_pred ccHHHHHHhhccCCc-ccccHHH----HHHHHHhhcCCCeEEEeeC
Q 029543 140 PDLDVALKRMFLCWV-DFVGIEY----CRSLLLVLLFRPLKIMEND 180 (192)
Q Consensus 140 ~~~~~~i~~~~~~g~-d~~g~~~----~~~~~~~l~~~G~v~~G~~ 180 (192)
++.+.+.+. +-+ .+++.+. ....++..+.++.+++-..
T Consensus 231 -~~~~~l~~a--DvVi~at~~~~~~~~~~~~~~~~~~~~~~viDla 273 (311)
T cd05213 231 -ELLELLNEA--DVVISATGAPHYAKIVERAMKKRSGKPRLIVDLA 273 (311)
T ss_pred -HHHHHHhcC--CEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeC
Confidence 344333321 212 6777442 3333333322456665543
No 157
>PRK12742 oxidoreductase; Provisional
Probab=97.53 E-value=0.00059 Score=52.39 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=44.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCee-eecCCcccHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG-SKEKVDLLKNKFGFDDA-FNYKEEPDLDVALK 147 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~ 147 (192)
.+++++|+||+|+||..+++.....|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~ 71 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVR 71 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHH
Confidence 4789999999999999999988889999887765 55666655435665433 34443313444343
No 158
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.53 E-value=0.0025 Score=51.01 Aligned_cols=46 Identities=22% Similarity=0.312 Sum_probs=40.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.|++++|.| .|.+|..+++.++.+|++|++.+|++++.+.+. ++|.
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~ 195 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARIT-EMGL 195 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCC
Confidence 488999999 899999999999999999999999998877776 6664
No 159
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00042 Score=54.45 Aligned_cols=42 Identities=29% Similarity=0.311 Sum_probs=37.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
++++++|+||+|+||..+++.+...|++|++++|++++.+.+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 49 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAA 49 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 588999999999999999988888999999999988776544
No 160
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.52 E-value=0.00033 Score=53.83 Aligned_cols=43 Identities=28% Similarity=0.368 Sum_probs=39.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++|+|+||+|++|..+++.+...|++|+.++|++++.+.+.
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 46 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMK 46 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999999999999999999998877764
No 161
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00084 Score=52.36 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=39.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..++.+++|+||+|++|..+++.+...|++|+.++|++++.+.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 52 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA 52 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 347899999999999999999888889999999999888777665
No 162
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00076 Score=52.87 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=40.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.+++++|+||+|++|..+++.....|++|++++|++++.+.+.++++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 52 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGE 52 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 478999999999999999988888899999999998877766545553
No 163
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.49 E-value=0.00062 Score=48.30 Aligned_cols=47 Identities=23% Similarity=0.341 Sum_probs=42.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.+.+++|.| +|++|..++..+...|+ +|+++.|+.+|.+.+.++++.
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~ 58 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG 58 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc
Confidence 589999999 79999999999999999 699999999999888767744
No 164
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.48 E-value=0.0023 Score=48.32 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=63.3
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcC-CCeeeecCCcccHHHHHHhhc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKN---KFG-FDDAFNYKEEPDLDVALKRMF 150 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~~g-~~~vi~~~~~~~~~~~i~~~~ 150 (192)
....+.++++|+-.| +|+ |.+++++++..+ .+|++++.+++.++.+++ .+| .+.+.... . +..+.+.+..
T Consensus 34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~~~ 109 (198)
T PRK00377 34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFTIN 109 (198)
T ss_pred HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhhcC
Confidence 445788999999999 777 999999998764 489999999998887763 356 33322111 1 3333332221
Q ss_pred cCCcccc----c----HHHHHHHHHhhcCCCeEEE
Q 029543 151 LCWVDFV----G----IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 151 ~~g~d~~----g----~~~~~~~~~~l~~~G~v~~ 177 (192)
+.+|.+ + ...++.+.+.|+|+|++++
T Consensus 110 -~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 110 -EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred -CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 123321 1 2377888899999996554
No 165
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.47 E-value=0.0025 Score=46.99 Aligned_cols=90 Identities=17% Similarity=0.142 Sum_probs=58.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCCcccHHHHHHhhccCCc-cccc-----H
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDVALKRMFLCWV-DFVG-----I 159 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~g~-d~~g-----~ 159 (192)
|+|.||+|.+|..+++.+...|.+|++++|++++.+. ..+++.+ .|..+.+.+.+.++.. +.+ .++| .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~--d~vi~~~~~~~~~~ 75 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGA--DAVIHAAGPPPKDV 75 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTS--SEEEECCHSTTTHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhc--chhhhhhhhhcccc
Confidence 7899999999999999999999999999999998776 2233322 2333321223222211 122 5555 3
Q ss_pred HHHHHHHHhhcCCC--e-EEEeeCC
Q 029543 160 EYCRSLLLVLLFRP--L-KIMENDS 181 (192)
Q Consensus 160 ~~~~~~~~~l~~~G--~-v~~G~~~ 181 (192)
......++.++..| + +.++..+
T Consensus 76 ~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccceeeeccc
Confidence 46677778887777 4 4555543
No 166
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00069 Score=52.91 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=38.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~ 127 (192)
.+++++|+||+|+||..+++.....|++|+.++|++++.+.+.++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~ 50 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAA 50 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 478999999999999999988888899999999998877665534
No 167
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.45 E-value=0.0023 Score=50.87 Aligned_cols=104 Identities=19% Similarity=0.238 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---e--eecCC
Q 029543 67 PSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKN---KFGFDD---A--FNYKE 138 (192)
Q Consensus 67 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~---v--i~~~~ 138 (192)
+=...+..+.+..++++|++||=+| + |-|.+++..|+..|++|++++.|++..+.+++ +.|... + -|++
T Consensus 56 AQ~~k~~~~~~kl~L~~G~~lLDiG-C-GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~r- 132 (283)
T COG2230 56 AQRAKLDLILEKLGLKPGMTLLDIG-C-GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYR- 132 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeC-C-ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccc-
Confidence 4445555566788999999999999 4 45889999999999999999999998888774 345441 2 1232
Q ss_pred cccHHHHHHhhccCCc-ccccH----HHHHHHHHhhcCCCeE
Q 029543 139 EPDLDVALKRMFLCWV-DFVGI----EYCRSLLLVLLFRPLK 175 (192)
Q Consensus 139 ~~~~~~~i~~~~~~g~-d~~g~----~~~~~~~~~l~~~G~v 175 (192)
++.+....+..=|+ +.+|. ..+..+-+.|+|+|++
T Consensus 133 --d~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~ 172 (283)
T COG2230 133 --DFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRM 172 (283)
T ss_pred --ccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceE
Confidence 34433333322233 77884 3788889999999953
No 168
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.00081 Score=54.89 Aligned_cols=43 Identities=23% Similarity=0.338 Sum_probs=38.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|+||..+++.+...|++|++++|++++++.+.
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~ 48 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVA 48 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5789999999999999999988889999999999998877654
No 169
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.43 E-value=0.002 Score=53.71 Aligned_cols=105 Identities=19% Similarity=0.139 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHH
Q 029543 67 PSVTAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVAL 146 (192)
Q Consensus 67 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i 146 (192)
+....+..+.+...+++|++||-+| + |.|.++..+++..|++|++++.+++.++.+++.. ...-++.... ++.+ +
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~~-l 225 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYRD-L 225 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chhh-c
Confidence 3344445555667889999999999 4 5788888999888999999999999999998433 2211221112 2221 1
Q ss_pred HhhccCCc------ccccH----HHHHHHHHhhcCCCeEEE
Q 029543 147 KRMFLCWV------DFVGI----EYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 147 ~~~~~~g~------d~~g~----~~~~~~~~~l~~~G~v~~ 177 (192)
.. .-+.+ +.+|. ..++.+.+.|+|+|++++
T Consensus 226 ~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl 265 (383)
T PRK11705 226 NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLL 265 (383)
T ss_pred CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 00 00111 44452 367888899999996543
No 170
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.43 E-value=0.00041 Score=56.37 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=38.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~ 127 (192)
.|++++|+||+++||...++.....|++|+.++|++++++.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 589999999999999988877767899999999999988776533
No 171
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.42 E-value=0.00071 Score=57.45 Aligned_cols=89 Identities=15% Similarity=0.036 Sum_probs=63.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc-ccccHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV-DFVGIE 160 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~-d~~g~~ 160 (192)
-.|++|+|.| .|.||..+++.++.+|++|+++++++.+...+. ..|+..+ ++.+.++. .+-+ .++|..
T Consensus 252 LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~-------~leell~~--ADIVI~atGt~ 320 (476)
T PTZ00075 252 IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV-------TLEDVVET--ADIFVTATGNK 320 (476)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec-------cHHHHHhc--CCEEEECCCcc
Confidence 4799999999 899999999999999999999998887765665 5565421 23332321 1111 556643
Q ss_pred -HH-HHHHHhhcCCCe-EEEeeCC
Q 029543 161 -YC-RSLLLVLLFRPL-KIMENDS 181 (192)
Q Consensus 161 -~~-~~~~~~l~~~G~-v~~G~~~ 181 (192)
.+ ...++.|+++++ +.+|...
T Consensus 321 ~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 321 DIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred cccCHHHHhccCCCcEEEEcCCCc
Confidence 44 478899999995 5776653
No 172
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.40 E-value=0.00067 Score=57.28 Aligned_cols=66 Identities=21% Similarity=0.251 Sum_probs=51.6
Q ss_pred chhHHHHHHHHHHHhC---CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC
Q 029543 65 IMPSVTAFAGLYEICS---PKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFD 131 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~---~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~ 131 (192)
..+..++++++..... ..++++|+|+| +|.+|.++++.++..|+ +|+++++++++.+.+.+++|.+
T Consensus 160 ~~~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~ 229 (423)
T PRK00045 160 AGAVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE 229 (423)
T ss_pred CCCcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc
Confidence 3466777888743322 25789999999 89999999999999998 8999999998876554378864
No 173
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00058 Score=53.71 Aligned_cols=45 Identities=22% Similarity=0.345 Sum_probs=39.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~ 127 (192)
.|++++|+||+++||..+++.+...|++|++++|++++++.+.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREK 51 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 478999999999999999988888999999999998877665533
No 174
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00061 Score=53.00 Aligned_cols=44 Identities=27% Similarity=0.360 Sum_probs=39.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..+++++|+||+|++|..+++.+...|++|++++|++++++.+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~ 50 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR 50 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35799999999999999999888888999999999998877665
No 175
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0011 Score=51.20 Aligned_cols=63 Identities=19% Similarity=0.285 Sum_probs=45.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CC-eeeecCCcccHHHHHHh
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG--FD-DAFNYKEEPDLDVALKR 148 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g--~~-~vi~~~~~~~~~~~i~~ 148 (192)
.+++|+||+|++|..+++.....|++|++++|++++++.+. +.+ .. ...|..+.+++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~ 67 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQ 67 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHh
Confidence 57999999999999888777778999999999998888776 432 11 12455544244444443
No 176
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.0037 Score=53.01 Aligned_cols=57 Identities=21% Similarity=0.317 Sum_probs=42.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHhcCCCe-eeecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS--KEKVDLLKNKFGFDD-AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~--~~~~~~~~~~~g~~~-vi~~~~~ 139 (192)
++++++|+|++|++|..+++.....|++|++++++ .++++.+.++++... .+|..+.
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 268 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAP 268 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCH
Confidence 57899999999999999999888899999999874 344444443566543 3565554
No 177
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00085 Score=52.18 Aligned_cols=43 Identities=33% Similarity=0.397 Sum_probs=38.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|+||..+++.....|++|+.++|++++.+.+.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 46 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA 46 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999888889999999999988766654
No 178
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0013 Score=50.82 Aligned_cols=49 Identities=10% Similarity=0.228 Sum_probs=41.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD 131 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~ 131 (192)
++++++|+||+|++|..+++.....|++|++++|++++.+.+.++++..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~ 53 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGES 53 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCc
Confidence 4789999999999999999988889999999999988777665466653
No 179
>PRK09186 flagellin modification protein A; Provisional
Probab=97.36 E-value=0.0014 Score=50.98 Aligned_cols=46 Identities=24% Similarity=0.344 Sum_probs=39.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+++++|+||+|++|..++......|++|+.++|++++.+.+.+++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESL 48 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence 5789999999999999999888888999999999988776654343
No 180
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0015 Score=51.58 Aligned_cols=43 Identities=23% Similarity=0.254 Sum_probs=38.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.+...|++|++++|++++++.+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~ 45 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFE 45 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHH
Confidence 3678999999999999999888888999999999998887776
No 181
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.00076 Score=52.89 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=38.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+.+++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~ 51 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVA 51 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999988889999999999988766554
No 182
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.00079 Score=53.90 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=37.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.+...|++|++++|++++++.+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~ 81 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA 81 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 4688999999999999999888888999999999988876665
No 183
>PRK05717 oxidoreductase; Validated
Probab=97.32 E-value=0.0017 Score=50.56 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=38.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.|++++|+||+|+||..+++.....|++|+.+++++++.+.+.++++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 55 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG 55 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC
Confidence 47899999999999999998887889999999988776665543554
No 184
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0015 Score=50.16 Aligned_cols=54 Identities=11% Similarity=0.230 Sum_probs=41.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCCc
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA-FNYKEE 139 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~~ 139 (192)
+++|+||+|++|..+++.....|++|+.++|++++++.+.++++...+ .|..++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~ 56 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDP 56 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCH
Confidence 589999999999999988888899999999998887776545554332 454443
No 185
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.30 E-value=0.00034 Score=58.93 Aligned_cols=101 Identities=12% Similarity=0.142 Sum_probs=65.2
Q ss_pred hhhhhhhccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHH---HHhCCCCCCE
Q 029543 10 KRLCKIQNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLY---EICSPKKGEY 86 (192)
Q Consensus 10 ~~~C~~~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~---~~~~~~~g~~ 86 (192)
++.|......|..+.+.|.+++.+.... . .. ..+.. .+...++.++. +.....++++
T Consensus 123 ~~~a~~~~~~g~~l~~lf~~a~~~~k~v-r----------~~-----t~i~~----~~vSv~~~Av~la~~~~~~l~~~~ 182 (417)
T TIGR01035 123 YKVAQEEKTVGKVLERLFQKAFSVGKRV-R----------TE-----TDISA----GAVSISSAAVELAERIFGSLKGKK 182 (417)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHhhhh-h----------hh-----cCCCC----CCcCHHHHHHHHHHHHhCCccCCE
Confidence 5667777777777777776666543311 0 00 00101 12333334431 2333457899
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGFD 131 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~ 131 (192)
|+|+| +|.+|..+++.++..|+ +|++++|+.++.+.+.+++|..
T Consensus 183 VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~ 227 (417)
T TIGR01035 183 ALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE 227 (417)
T ss_pred EEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe
Confidence 99999 79999999999999995 8999999988866444377764
No 186
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.30 E-value=0.0018 Score=50.42 Aligned_cols=47 Identities=19% Similarity=0.286 Sum_probs=40.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.+++++|+||+|++|..+++.....|++|+.++++.++.+.+.++++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 46789999999999999998888889999999999988777664444
No 187
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0017 Score=50.45 Aligned_cols=43 Identities=14% Similarity=0.290 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+.++|+++..+...
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~ 56 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA 56 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999877655554
No 188
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0009 Score=52.06 Aligned_cols=43 Identities=23% Similarity=0.384 Sum_probs=38.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+.++|++++.+.+.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 47 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV 47 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999988877664
No 189
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.29 E-value=0.00091 Score=51.71 Aligned_cols=46 Identities=20% Similarity=0.319 Sum_probs=39.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+.+++|+||+|++|..+++.....|++|++++|++++.+.+.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEI 49 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4679999999999999999888888999999999988777665343
No 190
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.00092 Score=52.02 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=38.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~ 127 (192)
.|++++|+||+|++|..+++.....|++|++++|++++.+.+.++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADE 52 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 478999999999999999988888899999999998877666533
No 191
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.00092 Score=52.36 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=38.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.|++++|+||++++|..+++.....|++|++++|++++++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 49 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAE 49 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4789999999999999999888889999999999988776554
No 192
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.00092 Score=54.03 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.|++++|+||+++||..+++.....|++|+.++|++++.+.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~ 55 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAV 55 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999877778999999999988766554
No 193
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.28 E-value=0.0022 Score=48.19 Aligned_cols=46 Identities=24% Similarity=0.302 Sum_probs=39.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+.+++|.|++|++|..+++.+...|++|+.+.|+.++.+.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l 72 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSL 72 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 5789999998999999888887778899999999998877766344
No 194
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0022 Score=50.09 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=38.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
+.+++|+||+|++|..+++.....|++|+++++++++++.+.+++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 46 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL 46 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 468999999999999999887778999999999988877665343
No 195
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.27 E-value=0.0025 Score=46.49 Aligned_cols=103 Identities=15% Similarity=0.086 Sum_probs=61.2
Q ss_pred HHHHHHHhC-CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhc
Q 029543 72 FAGLYEICS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMF 150 (192)
Q Consensus 72 ~~~l~~~~~-~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 150 (192)
+.++.+..+ .-.|++++|.| =|-+|.-+++.+|.+|++|++++..|-+.-.+. .-|.+.. .+.+.+.+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~-- 78 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRD-- 78 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT--
T ss_pred HHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhh--
Confidence 344434333 44799999999 999999999999999999999999998777766 5566422 23222221
Q ss_pred cCCc--ccccHH--HHHHHHHhhcCCCeE-EEeeCCCCCcc
Q 029543 151 LCWV--DFVGIE--YCRSLLLVLLFRPLK-IMENDSGSTPI 186 (192)
Q Consensus 151 ~~g~--d~~g~~--~~~~~~~~l~~~G~v-~~G~~~~~~~~ 186 (192)
..+ .++|.. ...+-++.|+.+-++ .+|....+..+
T Consensus 79 -adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~ 118 (162)
T PF00670_consen 79 -ADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDV 118 (162)
T ss_dssp --SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTH
T ss_pred -CCEEEECCCCccccCHHHHHHhcCCeEEeccCcCceeEee
Confidence 122 566753 345677888777754 56665555443
No 196
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.27 E-value=0.001 Score=51.40 Aligned_cols=43 Identities=12% Similarity=0.252 Sum_probs=37.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+|++|++|+.+++.+...|++|+.+++++++.+.+.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~ 46 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV 46 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999988889999999999987766554
No 197
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.001 Score=52.10 Aligned_cols=45 Identities=27% Similarity=0.276 Sum_probs=38.3
Q ss_pred CCCCCEEEEeCCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 81 PKKGEYVYVSAASG-AVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G-~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+..+++++|+||+| ++|..+++.+...|++|+++++++++++...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~ 59 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETA 59 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 34578999999886 8999999999899999999999887766554
No 198
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0014 Score=50.05 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=37.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
++++|+|++|++|..+++.....|++|++++|++++.+.++ ++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~ 44 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL 44 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc
Confidence 57999999999999988877788999999999988776666 44
No 199
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0017 Score=50.66 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=38.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
++++|+||+|++|..+++.....|++|++++|++++.+.+.+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 45 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL 45 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 57999999999999999877788999999999998887776344
No 200
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.001 Score=51.74 Aligned_cols=42 Identities=17% Similarity=0.260 Sum_probs=36.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++++|+||+|++|..+++.+...|++|++++|++++.+.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 43 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALR 43 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 468999999999999999998889999999999887766654
No 201
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0011 Score=51.45 Aligned_cols=43 Identities=21% Similarity=0.389 Sum_probs=37.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+.+++++++.+.+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~ 49 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA 49 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4689999999999999999988888999999999987766655
No 202
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0011 Score=51.14 Aligned_cols=43 Identities=23% Similarity=0.307 Sum_probs=38.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+|++|++|..+++.....|++|++++|++++.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~ 47 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVY 47 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHH
Confidence 4689999999999999999888888999999999998776654
No 203
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.23 E-value=0.0012 Score=51.41 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.+...|++|+.++|++++.+.+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 51 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA 51 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999888888999999999987765544
No 204
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0011 Score=50.78 Aligned_cols=40 Identities=15% Similarity=0.291 Sum_probs=35.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
+++++||+||+|++|..+++.....|++|++++|++++.+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~ 45 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLS 45 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHH
Confidence 4789999999999999999888888999999999876543
No 205
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0013 Score=53.80 Aligned_cols=43 Identities=26% Similarity=0.284 Sum_probs=38.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.+...|++|++++|++++++.+.
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~ 49 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALA 49 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5789999999999999999888888999999999988776654
No 206
>PRK06484 short chain dehydrogenase; Validated
Probab=97.21 E-value=0.0022 Score=55.34 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eeecCCcccHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDVAL 146 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i 146 (192)
.+++++|+||+++||..+++.....|++|+.++|+.++++.+.++++... .+|..+++++.+.+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGF 70 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHH
Confidence 57899999999999999998888899999999999988877764666432 34555442343333
No 207
>PRK06194 hypothetical protein; Provisional
Probab=97.20 E-value=0.0013 Score=52.17 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+.++||+||+|+||..+++.....|++|++++++.++++.+.
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 47 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV 47 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 4688999999999999999888888999999999877665554
No 208
>PRK06196 oxidoreductase; Provisional
Probab=97.20 E-value=0.0013 Score=53.11 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=38.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+++|+|+||+|++|..+++.....|++|++++|++++.+.+.+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l 70 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI 70 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 4789999999999999999877788999999999988776654343
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0027 Score=48.38 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=42.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCCc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD-DAFNYKEE 139 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~vi~~~~~ 139 (192)
++++|+|++|++|..+++.....|++|+.+++++++.+.++ ..+.. ...|..+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~ 56 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADP 56 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCH
Confidence 47999999999999999877778999999999988888777 55543 23454444
No 210
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0013 Score=51.44 Aligned_cols=45 Identities=27% Similarity=0.417 Sum_probs=39.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~ 127 (192)
++.+++|+||+|++|..+++.....|++|++++|++++.+.+.++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 48 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAAR 48 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 478899999999999999988888899999999998887776534
No 211
>PRK06484 short chain dehydrogenase; Validated
Probab=97.19 E-value=0.0024 Score=55.02 Aligned_cols=57 Identities=16% Similarity=0.195 Sum_probs=45.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eeecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD---AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---vi~~~~~ 139 (192)
.|++++|+||+++||..+++.....|++|++++|++++++.+.++++... ..|..++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~ 327 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDE 327 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCH
Confidence 57899999999999999998888889999999999988888775565432 2455544
No 212
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0014 Score=51.95 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=37.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+++++++++++.+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~ 47 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV 47 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999888888999999999987766554
No 213
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0014 Score=50.26 Aligned_cols=46 Identities=15% Similarity=0.274 Sum_probs=38.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+.+++|+||+|++|..+++.+...|++|++++|++++.+.+.+++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL 50 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHH
Confidence 4689999999999999999877778999999999988776665344
No 214
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.17 E-value=0.0014 Score=50.69 Aligned_cols=45 Identities=18% Similarity=0.216 Sum_probs=38.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..++++++|+|++|++|..+++.....|++|++++|+.++.+.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~ 53 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY 53 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Confidence 447899999999999999999877778999999999987655443
No 215
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.17 E-value=0.0014 Score=52.97 Aligned_cols=46 Identities=20% Similarity=0.257 Sum_probs=39.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+++++|+||+|+||..+++.....|++|++++|++++.+.+.+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l 50 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL 50 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 4789999999999999999888778999999999988877665454
No 216
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0015 Score=50.72 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+.++|++++.+.+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 48 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV 48 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999877778999999999987755443
No 217
>PLN02253 xanthoxin dehydrogenase
Probab=97.16 E-value=0.0032 Score=49.76 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=38.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+++++|+||+|+||..+++.....|++|+++++++++.+.+.+++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~ 62 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL 62 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Confidence 4789999999999999999877778999999999877666555344
No 218
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.16 E-value=0.0027 Score=48.77 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=36.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCC
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKV-DLLKNKFGF 130 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~~~g~ 130 (192)
+++++|+||+|++|..+++.....|++|++++|++++. +.++ +.+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~ 48 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGA 48 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCC
Confidence 46899999999999999988888899999999886543 3333 4554
No 219
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0014 Score=50.90 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=37.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
|++++|+|++|++|..+++.....|++|++++|++++.+.+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~ 42 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK 42 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 578999999999999999988889999999999987766654
No 220
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.14 E-value=0.0036 Score=48.00 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=37.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
++++++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~ 46 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA 46 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Confidence 4578999999999999999888888999999999988765543
No 221
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.14 E-value=0.0016 Score=50.83 Aligned_cols=43 Identities=26% Similarity=0.292 Sum_probs=38.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+.++++.++.+.+.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 53 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA 53 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999988776655
No 222
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.13 E-value=0.0032 Score=48.87 Aligned_cols=45 Identities=22% Similarity=0.372 Sum_probs=38.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
+++|+||+|++|..+++.+...|++|++++|++++++.+.+.++.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 46 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGD 46 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc
Confidence 689999999999999988888899999999999888777644554
No 223
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.13 E-value=0.0014 Score=56.90 Aligned_cols=48 Identities=21% Similarity=0.245 Sum_probs=41.5
Q ss_pred HhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 78 ICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 78 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..+.+.|++|+|+||+|++|..+++.+...|++|++++|+.++.+.+.
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~ 121 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLV 121 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 445668999999999999999999888888999999999988876554
No 224
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0017 Score=50.66 Aligned_cols=43 Identities=23% Similarity=0.402 Sum_probs=37.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+|+++++|..+++.....|++|++++|++++.+.+.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA 48 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999988776654
No 225
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0015 Score=51.02 Aligned_cols=44 Identities=11% Similarity=0.047 Sum_probs=35.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHH
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEK-VDLL 124 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~-~~~~ 124 (192)
+..+++|+|+||+|++|..+++-+... |++|++++|++++ ++.+
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~ 50 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAA 50 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHH
Confidence 456789999999999999998766556 4899999998775 4443
No 226
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0016 Score=52.27 Aligned_cols=42 Identities=21% Similarity=0.216 Sum_probs=36.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+++|+|+||+|+||..+++.....|++|++++|+.++.+.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~ 56 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAA 56 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 578999999999999999987777899999999998776544
No 227
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.12 E-value=0.0017 Score=50.44 Aligned_cols=43 Identities=14% Similarity=0.266 Sum_probs=37.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.++++||+||+|++|..+++.....|++|+.++|++++.+.+.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~ 50 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV 50 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 4789999999999999999888788999999999987766554
No 228
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.12 E-value=0.0018 Score=50.45 Aligned_cols=43 Identities=16% Similarity=0.225 Sum_probs=37.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.++++||+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 48 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVA 48 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 4789999999999999999888889999999999987665544
No 229
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.002 Score=49.77 Aligned_cols=43 Identities=21% Similarity=0.240 Sum_probs=37.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..++......|++|+++++++++.+.+.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 48 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA 48 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999988766554
No 230
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.08 E-value=0.0021 Score=50.01 Aligned_cols=43 Identities=16% Similarity=0.254 Sum_probs=37.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|+.++|++++++.+.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 52 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV 52 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 5889999999999999999877778999999999987665544
No 231
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0043 Score=48.89 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=38.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
+++||+||+|++|..+++.....|++|++++|++++.+.+++..+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG 47 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 579999999999999998777889999999999988887763433
No 232
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0031 Score=49.14 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCH-VVGSAGSKEKVD 122 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~~~~ 122 (192)
.+++++|+||+|++|..+++.+...|++ |++++|++++.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE 45 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH
Confidence 5789999999999999999988889997 999999877655
No 233
>PRK09242 tropinone reductase; Provisional
Probab=97.07 E-value=0.0022 Score=49.99 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=38.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~ 50 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQAR 50 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999988776654
No 234
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0021 Score=50.24 Aligned_cols=42 Identities=24% Similarity=0.353 Sum_probs=36.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+.+++|+||+|++|..+++.+...|++|++++|++++.+.+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~ 42 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLA 42 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 357999999999999999888888999999999987655443
No 235
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.06 E-value=0.0047 Score=48.14 Aligned_cols=37 Identities=30% Similarity=0.291 Sum_probs=33.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.+++++|+||+|++|..+++.....|++|++++|++.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~ 43 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL 43 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH
Confidence 4789999999999999999888888999999998854
No 236
>PRK08643 acetoin reductase; Validated
Probab=97.05 E-value=0.0021 Score=50.02 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=36.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++++|+||+|++|..+++.....|++|+.++|++++.+.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 43 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA 43 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 578999999999999999888888999999999987766554
No 237
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.05 E-value=0.0055 Score=46.69 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=70.1
Q ss_pred CCCEEEEeC-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCCcccHHH---HHHhhccCCc---
Q 029543 83 KGEYVYVSA-ASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDV---ALKRMFLCWV--- 154 (192)
Q Consensus 83 ~g~~VlV~G-a~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~---~i~~~~~~g~--- 154 (192)
..+.|||+| +.||||..++.=....|+.|+++.|+-++.+.+..++|.. .-+|..+++++.+ ++++.+.+.+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 346788886 4689999888777778999999999999888887577764 2356555434433 3444332221
Q ss_pred ------ccccH--------------------HHHHHHH--HhhcCCC-eEEEeeCCCCCcccccc
Q 029543 155 ------DFVGI--------------------EYCRSLL--LVLLFRP-LKIMENDSGSTPIPFAF 190 (192)
Q Consensus 155 ------d~~g~--------------------~~~~~~~--~~l~~~G-~v~~G~~~~~~~~~~~~ 190 (192)
.|++. --+.+++ ...+..| +|.+|...+-.|+||.-
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~ 150 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGS 150 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhh
Confidence 23221 1122333 3466778 67899988888888753
No 238
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.04 E-value=0.0012 Score=44.65 Aligned_cols=44 Identities=30% Similarity=0.425 Sum_probs=36.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKL-AGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~-~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
||++||-.| +| .|.++..+++. .+++|++++.+++-++.+++..
T Consensus 1 p~~~vLDlG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~ 45 (112)
T PF12847_consen 1 PGGRVLDLG-CG-TGRLSIALARLFPGARVVGVDISPEMLEIARERA 45 (112)
T ss_dssp TTCEEEEET-TT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEEc-Cc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 588999998 44 48889999984 6789999999999999988554
No 239
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.04 E-value=0.0095 Score=44.48 Aligned_cols=92 Identities=15% Similarity=-0.012 Sum_probs=55.1
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCee-eecCCcccHHHHHHhhccC-Ccc
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDVALKRMFLC-WVD 155 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~-g~d 155 (192)
..+++|++||..| +|+-+.......+..+ .+|++++.++.+ + ..+++.+ .|..+. +..+.+.+..++ ++|
T Consensus 28 ~~i~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 28 KLIKPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKVD 100 (188)
T ss_pred cccCCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCcc
Confidence 4568999999999 6776654444444434 389999998754 2 2344322 244333 444445444333 342
Q ss_pred -----c----cc-------------HHHHHHHHHhhcCCCeEEE
Q 029543 156 -----F----VG-------------IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 156 -----~----~g-------------~~~~~~~~~~l~~~G~v~~ 177 (192)
. .| ...+..+.+.|+|+|++++
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi 144 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVV 144 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 2 12 2367788999999996544
No 240
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.03 E-value=0.0072 Score=45.80 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=41.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
-.|.+|+|+| .|.+|..+++.+...|++|+++++++++.+.+++.+|+
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCC
Confidence 3578999999 89999999999999999999999999988887745564
No 241
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.03 E-value=0.0046 Score=47.78 Aligned_cols=36 Identities=28% Similarity=0.393 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.|++++|+||+|+||..+++.+...|++|+.++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 478999999999999999988888899999999875
No 242
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.02 E-value=0.014 Score=44.76 Aligned_cols=99 Identities=16% Similarity=0.095 Sum_probs=69.5
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeeecCC-cccHHHHHHhhc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKN---KFGFDDAFNYKE-EPDLDVALKRMF 150 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~-~~~~~~~i~~~~ 150 (192)
...+....++||=+| ..+|..++.+|..+. .+++.+++++++.+.+++ +.|.+..|..-. . +..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 345566788999998 677889999999876 489999999999999874 457665332221 2 5555565522
Q ss_pred cCCc-----cccc---HHHHHHHHHhhcCCCeEEEe
Q 029543 151 LCWV-----DFVG---IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 151 ~~g~-----d~~g---~~~~~~~~~~l~~~G~v~~G 178 (192)
.+.+ |+-- .+.++.+++.|++||++++-
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 2233 4443 34899999999999976654
No 243
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0024 Score=50.25 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=37.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.+...|++|++++|++++.+.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 48 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAA 48 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4789999999999999999988889999999999887665544
No 244
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.01 E-value=0.0024 Score=49.51 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+|++|++|..+++.....|++|++++|++++.+.+.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~ 45 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA 45 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4679999999999999999887788999999999988766554
No 245
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.003 Score=48.66 Aligned_cols=44 Identities=18% Similarity=0.205 Sum_probs=38.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..+++++|+|++|++|..+++.+...|++|++++|++++.+.+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 47 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALA 47 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34678999999999999999888888999999999987766654
No 246
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.01 E-value=0.0026 Score=50.22 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|+.+++.....|++|++++|++++.+.+.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 51 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV 51 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999887665554
No 247
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0027 Score=49.07 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=36.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~ 43 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELK 43 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 568999999999999888777778999999999988776654
No 248
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.99 E-value=0.0026 Score=49.12 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=35.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+.+++|+||+|++|..+++.....|++|++++|++++.+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~ 46 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAAT 46 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467999999999999999988778899999999997655443
No 249
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.98 E-value=0.0032 Score=45.57 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=32.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGS--KEKVDLL 124 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~--~~~~~~~ 124 (192)
++++|+||++++|..+++.....|+ +|+.+.|+ .++.+.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l 43 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQEL 43 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc
Confidence 4799999999999998877776777 88999988 5555544
No 250
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.98 E-value=0.0024 Score=49.42 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=36.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
++++||+||+|++|..++......|++|++++|++++.+.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~ 42 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAA 42 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 357999999999999999888788999999999988776665
No 251
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.003 Score=48.87 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=36.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+.+++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~ 47 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVA 47 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4788999999999999999888788999999999877655543
No 252
>PRK08589 short chain dehydrogenase; Validated
Probab=96.97 E-value=0.0028 Score=49.99 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=34.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+++++|+||++++|..+++.....|++|++++++ ++.+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~ 45 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSET 45 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHH
Confidence 47899999999999999998777889999999998 544443
No 253
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0028 Score=49.07 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|++++|++++.+...
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 46 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVA 46 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHH
Confidence 4679999999999999999877778999999999987766554
No 254
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.96 E-value=0.0032 Score=48.42 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=36.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+.+++|+|++|++|..++..+...|++|++++|++++.+.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~ 47 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAV 47 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 367899999999999999988778899999999998766554
No 255
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.96 E-value=0.012 Score=43.81 Aligned_cols=94 Identities=20% Similarity=0.254 Sum_probs=61.3
Q ss_pred HhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhccCC
Q 029543 78 ICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFLCW 153 (192)
Q Consensus 78 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~g 153 (192)
...+++|+.++=+|+ +.|...+++++..-. +|+++++++++++..++ +||.+.+.-... +-.+.+.+.. .
T Consensus 29 ~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--~ 102 (187)
T COG2242 29 KLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--S 102 (187)
T ss_pred hhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--C
Confidence 346789998888883 347788899965544 99999999998888763 678775422221 2222233221 1
Q ss_pred cc--cccH-----HHHHHHHHhhcCCCeEEE
Q 029543 154 VD--FVGI-----EYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 154 ~d--~~g~-----~~~~~~~~~l~~~G~v~~ 177 (192)
+| ++|+ ..++.+++.|+++|++++
T Consensus 103 ~daiFIGGg~~i~~ile~~~~~l~~ggrlV~ 133 (187)
T COG2242 103 PDAIFIGGGGNIEEILEAAWERLKPGGRLVA 133 (187)
T ss_pred CCEEEECCCCCHHHHHHHHHHHcCcCCeEEE
Confidence 23 2332 388899999999996543
No 256
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.003 Score=49.87 Aligned_cols=43 Identities=23% Similarity=0.212 Sum_probs=37.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 44 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLL 44 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 3678999999999999999888888999999999987766554
No 257
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.94 E-value=0.0031 Score=49.11 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=36.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++++|+||+|++|..+++.....|++|+.++++.++.+.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~ 43 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA 43 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 578999999999999999888888999999999887665543
No 258
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.94 E-value=0.0044 Score=47.03 Aligned_cols=94 Identities=18% Similarity=0.094 Sum_probs=61.2
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhccC-
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFLC- 152 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~- 152 (192)
+...+++|++||-+| .|.|..++-+|+..+ +|+.+.+.++=.+.+++ .+|.+.|.-...+ - .+.+...
T Consensus 66 ~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD--G---~~G~~~~a 137 (209)
T COG2518 66 QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD--G---SKGWPEEA 137 (209)
T ss_pred HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC--c---ccCCCCCC
Confidence 667899999999999 456999999999888 99999998875555542 5777553222111 0 0111111
Q ss_pred Ccc-----cccHHHHHHHHHhhcCCCeE--EEe
Q 029543 153 WVD-----FVGIEYCRSLLLVLLFRPLK--IME 178 (192)
Q Consensus 153 g~d-----~~g~~~~~~~~~~l~~~G~v--~~G 178 (192)
.+| +...+.-+..++.|++||++ -+|
T Consensus 138 PyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 138 PYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 124 22233556778999999953 456
No 259
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0031 Score=48.59 Aligned_cols=43 Identities=9% Similarity=0.169 Sum_probs=37.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.|++++|+||++++|..+++-....|++|+.++|++++++.+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~ 46 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTY 46 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 4789999999999999988877778999999999998876654
No 260
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0025 Score=49.67 Aligned_cols=43 Identities=16% Similarity=0.149 Sum_probs=36.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.|.+++|+||+|++|..+++.....|++|+++++++++.+..+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 48 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE 48 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH
Confidence 4789999999999999999887788999999999887764433
No 261
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0032 Score=48.63 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=35.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
++++|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~ 42 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLA 42 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 57999999999999999888888999999999988766543
No 262
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0032 Score=49.56 Aligned_cols=40 Identities=10% Similarity=0.165 Sum_probs=34.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++|+||+|++|..+++.+...|++|+++++++++.+.+.
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~ 41 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV 41 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 6999999999999999888888999999999887765543
No 263
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.89 E-value=0.0072 Score=47.07 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=32.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.|++++|+||+++||..+++.....|++|+++++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 578999999999999999988888999999988764
No 264
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.89 E-value=0.0033 Score=49.11 Aligned_cols=40 Identities=28% Similarity=0.250 Sum_probs=35.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++|+||++++|..+++.....|++|+.++|++++++.+.
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 41 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKAL 41 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 6899999999999999888888999999999988776654
No 265
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0079 Score=47.44 Aligned_cols=45 Identities=22% Similarity=0.267 Sum_probs=38.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
+++|+|+||+|++|..+++.+...|++|++++|++++++.+.+.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 47 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY 47 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc
Confidence 568999999999999999888778999999999988877766343
No 266
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.88 E-value=0.0041 Score=50.28 Aligned_cols=46 Identities=24% Similarity=0.292 Sum_probs=38.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD 132 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~ 132 (192)
+|+|+||+|-+|..+++.+...|.+|++++|+.++...+. ..+.+.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~ 47 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAEL 47 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEE
Confidence 6999999999999999888888999999999987766655 556543
No 267
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0065 Score=47.03 Aligned_cols=41 Identities=20% Similarity=0.392 Sum_probs=34.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK-EKVDLLK 125 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~-~~~~~~~ 125 (192)
++++|+||+|++|..+++.....|++|++++|++ ++++.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 4799999999999999988777899999999886 5555544
No 268
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.88 E-value=0.0075 Score=47.30 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=31.1
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASG--AVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G--~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.|++++|+||++ +||..+++.....|++|+.+++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~ 44 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE 44 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch
Confidence 578999999887 899999887777899999988874
No 269
>PRK08264 short chain dehydrogenase; Validated
Probab=96.88 E-value=0.0025 Score=48.94 Aligned_cols=40 Identities=28% Similarity=0.354 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVD 122 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~ 122 (192)
.+.+++|+||+|++|..+++.+...|+ +|++++|++++.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT 45 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence 468999999999999999998888999 9999999877654
No 270
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.86 E-value=0.004 Score=48.07 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
++.++||+||+|++|..+++.....|++|+.++++.++.+.+.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~ 44 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA 44 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH
Confidence 4788999999999999999888888999999999987766554
No 271
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.86 E-value=0.021 Score=38.97 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=60.2
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCe--eeecCCcccHHHHHHhhc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDVALKRMF 150 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~ 150 (192)
....+.++++|+-.| +|. |..+..+++..+ .+|++++.++...+.+++ +++... ++..+ ..+......
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 86 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD----APEALEDSL 86 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc----ccccChhhc
Confidence 344667788999999 666 999999999875 499999999998888763 344432 22221 111011110
Q ss_pred cCCcccc-----c---HHHHHHHHHhhcCCCeEEEe
Q 029543 151 LCWVDFV-----G---IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 151 ~~g~d~~-----g---~~~~~~~~~~l~~~G~v~~G 178 (192)
+.+|.+ . ...++.+.+.|+++|++++.
T Consensus 87 -~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 87 -PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred -CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 122211 1 24788899999999976543
No 272
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0038 Score=48.74 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+.+++|+||+|++|..+++.+...|++|+.++|+++..+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~ 46 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLA 46 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHH
Confidence 478999999999999999988888899999999887544333
No 273
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.84 E-value=0.0093 Score=45.82 Aligned_cols=47 Identities=26% Similarity=0.405 Sum_probs=39.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
++.+++|+||+|++|..+++.....|++|+..+++.++++.+.+.++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 51 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG 51 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 47899999999999999998888889999999988887776653444
No 274
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0076 Score=46.90 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=33.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.+++++|+|++++||..+++.....|++|++++++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~ 43 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD 43 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4789999999999999999888889999999998753
No 275
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.84 E-value=0.0072 Score=47.90 Aligned_cols=57 Identities=11% Similarity=0.170 Sum_probs=40.7
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCCCe--eeecCCc
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGSK---EKVDLLKNKFGFDD--AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~~---~~~~~~~~~~g~~~--vi~~~~~ 139 (192)
.|++++|+||+ ++||+.+++.....|++|+.++|++ ++++.+.++++... .+|..+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKP 67 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCH
Confidence 47899999986 7999999988778899999999885 34444433555432 2455543
No 276
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.83 E-value=0.0037 Score=48.73 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=32.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.++++||+||+|++|..+++.....|++|++++++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999998888889999999887
No 277
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0046 Score=48.12 Aligned_cols=45 Identities=18% Similarity=0.226 Sum_probs=37.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
+++++|+||+|++|..++......|++|++++|++++.+.+.+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~ 46 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL 46 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 568999999999999999877778999999999988776655343
No 278
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.0072 Score=47.12 Aligned_cols=43 Identities=16% Similarity=0.137 Sum_probs=34.8
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.|++++|+||+ ++||..+++.....|++|+.++|+++..+.++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~ 50 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ 50 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH
Confidence 57899999988 79999999877778999999998754344444
No 279
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.79 E-value=0.0047 Score=49.04 Aligned_cols=45 Identities=22% Similarity=0.377 Sum_probs=39.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~ 127 (192)
.|+.++|+|++.+||..++......|++|+.++|++++.+..+++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~ 51 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQE 51 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 588999999999999998888888999999999999987766533
No 280
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.78 E-value=0.0055 Score=45.04 Aligned_cols=48 Identities=29% Similarity=0.293 Sum_probs=40.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA 133 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v 133 (192)
.-+|+|+| +|.+|+.++++++.+|++|+..+.++++++.+. ..+...+
T Consensus 20 p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i 67 (168)
T PF01262_consen 20 PAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFI 67 (168)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEES
T ss_pred CeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceE
Confidence 36799999 999999999999999999999999999988887 7776543
No 281
>PRK06720 hypothetical protein; Provisional
Probab=96.77 E-value=0.0065 Score=44.77 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=36.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+..++|+||++++|..++......|++|+++++++++.+.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~ 56 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQAT 56 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 578999999999999999887777899999999987766544
No 282
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.76 E-value=0.0054 Score=47.72 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=37.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++|+|+||+|++|..+++.....|++|+.+++++++.+.+.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~ 52 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVV 52 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4789999999999999999888788999999999887765543
No 283
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.75 E-value=0.026 Score=46.02 Aligned_cols=95 Identities=20% Similarity=0.171 Sum_probs=62.1
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhcc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--HVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFL 151 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 151 (192)
+...++++++||..| +| .|..++.+++..+. +|++++.+++.++.+++ +.|.+.+.... . |..+...+.
T Consensus 74 ~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-g-D~~~~~~~~-- 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-G-DGYYGVPEF-- 147 (322)
T ss_pred HhcCCCCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C-Chhhccccc--
Confidence 455788999999999 66 59999999998764 69999999987777663 35665443222 2 332222111
Q ss_pred CCcc----ccc-HHHHHHHHHhhcCCCeEEE
Q 029543 152 CWVD----FVG-IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 152 ~g~d----~~g-~~~~~~~~~~l~~~G~v~~ 177 (192)
+.+| +.+ .......++.|+++|++++
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv 178 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIV 178 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEE
Confidence 1222 334 2455677899999996433
No 284
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.74 E-value=0.0058 Score=48.65 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=41.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHhcC-C-CeeeecCCcccHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL----LKNKFG-F-DDAFNYKEEPDLD 143 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~----~~~~~g-~-~~vi~~~~~~~~~ 143 (192)
..|+.|||+||++|+|...++=...+|++++..|.+.+-.+. ++ +.| + ..+.|..+.+++.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~ 102 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIY 102 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHH
Confidence 369999999999999987776555578999999988654333 33 334 1 2456655432443
No 285
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.74 E-value=0.0056 Score=49.51 Aligned_cols=46 Identities=20% Similarity=0.263 Sum_probs=38.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g 129 (192)
+++++|+||+++||..+++.....| ++|+.++|++++.+.+.++++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 6789999999999999888777789 899999999887766654543
No 286
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.73 E-value=0.0068 Score=45.01 Aligned_cols=40 Identities=25% Similarity=0.349 Sum_probs=35.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
-.|.+|.|+| .|.||+.+++.++.+|++|++.+++.+..+
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence 3689999999 999999999999999999999999987655
No 287
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.73 E-value=0.0052 Score=49.85 Aligned_cols=47 Identities=23% Similarity=0.333 Sum_probs=40.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.|.+++|+||++|||...++-....|++|+.+.|+.++.+.+++++.
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~ 80 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQ 80 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 57899999999999999998888889999999999987777764443
No 288
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.72 E-value=0.011 Score=45.93 Aligned_cols=56 Identities=14% Similarity=0.223 Sum_probs=39.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhcCCCe-eeecCCc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS-KEKVDLLKNKFGFDD-AFNYKEE 139 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-~~~~~~~~~~~g~~~-vi~~~~~ 139 (192)
.+++++|+||+|++|..+++.....|++|+++.++ ++..+.++ +.+... ..|..++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~ 63 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNR 63 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCH
Confidence 47899999999999999998888889998887654 44445554 334322 2354443
No 289
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.72 E-value=0.006 Score=47.81 Aligned_cols=43 Identities=26% Similarity=0.239 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+|+++++|..++......|++|+.+++++++.+.+.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~ 51 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL 51 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 5789999999999999888877788999999999987766544
No 290
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.004 Score=48.38 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=34.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.+++++|+||+|++|..+++.....|++|++++|++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 47899999999999999998888889999999988764
No 291
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0055 Score=47.37 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=32.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++++|+||+|++|..+++.+...|++|++++|+.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999988888899999998875
No 292
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0051 Score=49.62 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=32.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.|++++|+||+++||..+++.....|++|++++|+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999998888889999999987
No 293
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.69 E-value=0.01 Score=46.92 Aligned_cols=49 Identities=12% Similarity=0.201 Sum_probs=37.1
Q ss_pred CCCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCC
Q 029543 82 KKGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGSK---EKVDLLKNKFGF 130 (192)
Q Consensus 82 ~~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~~---~~~~~~~~~~g~ 130 (192)
..+++++|+||+ ++||..+++.....|++|+.+.|++ ++++.+.++++.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~ 61 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGA 61 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCC
Confidence 357899999986 7999999988888999999888764 444444435553
No 294
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.69 E-value=0.0054 Score=51.52 Aligned_cols=41 Identities=34% Similarity=0.472 Sum_probs=35.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL 123 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~ 123 (192)
.+++++|+||+|++|..+++.....|++|+++++++++++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 47899999999999999998777789999999998776543
No 295
>PRK04148 hypothetical protein; Provisional
Probab=96.69 E-value=0.0097 Score=42.09 Aligned_cols=51 Identities=20% Similarity=0.173 Sum_probs=40.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeee
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFN 135 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~ 135 (192)
..+.++++.| .| .|...++..+..|.+|+++|.+++..+.++ +.+.+.+.+
T Consensus 15 ~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~d 65 (134)
T PRK04148 15 GKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVD 65 (134)
T ss_pred ccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEEC
Confidence 3568899999 88 887555555577999999999999999998 777755543
No 296
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.68 E-value=0.0064 Score=52.34 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=41.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.+.+|++|+|.| .|..|++++++++..|++|+++|+++.+.+.++ ++|+
T Consensus 8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~ 56 (488)
T PRK03369 8 PLLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGV 56 (488)
T ss_pred cccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCC
Confidence 355789999999 899999999999999999999998877776666 5554
No 297
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0039 Score=48.58 Aligned_cols=37 Identities=24% Similarity=0.282 Sum_probs=33.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.|++++|+||+|++|..+++.....|++|++++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 4789999999999999999888888999999998764
No 298
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.67 E-value=0.013 Score=46.68 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=40.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~ 128 (192)
....+++++|.| +||.+++++..++..|+ +|+++.|+++|.+.+.+.+
T Consensus 118 ~~~~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 118 QVPPDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCCCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 445567999999 89999999988888898 7999999999888776343
No 299
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.007 Score=47.76 Aligned_cols=43 Identities=26% Similarity=0.178 Sum_probs=36.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
...+++|+||+|++|..+++.+...|++|++++++.++.+.+.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 51 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELV 51 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4568999999999999999888888999999998877655443
No 300
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.65 E-value=0.011 Score=47.49 Aligned_cols=89 Identities=18% Similarity=0.171 Sum_probs=64.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCCcccHHHHHHhhccCCc----ccccH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDVALKRMFLCWV----DFVGI 159 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~g~----d~~g~ 159 (192)
.+|.|+| .|-+|.-++.+|.-+|++|...++|.+|+..+...++-+ ++.-.+.. ++.+.+++. +.+ -.-|.
T Consensus 169 ~kv~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~-~iee~v~~a--DlvIgaVLIpga 244 (371)
T COG0686 169 AKVVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPS-NIEEAVKKA--DLVIGAVLIPGA 244 (371)
T ss_pred ccEEEEC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHH-HHHHHhhhc--cEEEEEEEecCC
Confidence 4578888 799999999999999999999999999999998566665 33333333 676666653 111 22232
Q ss_pred H----HHHHHHHhhcCCCe-EEE
Q 029543 160 E----YCRSLLLVLLFRPL-KIM 177 (192)
Q Consensus 160 ~----~~~~~~~~l~~~G~-v~~ 177 (192)
. .+++.++.|+||+. |=+
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDV 267 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDV 267 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEE
Confidence 1 67788999999994 434
No 301
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0054 Score=47.87 Aligned_cols=36 Identities=31% Similarity=0.519 Sum_probs=32.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++++|+||+|++|..+++.....|++|++++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 378999999999999999988888899999999876
No 302
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.0045 Score=48.57 Aligned_cols=40 Identities=20% Similarity=0.343 Sum_probs=34.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
.+++++|+||+|++|..+++.....|++|++++|++++.+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~ 42 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA 42 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc
Confidence 3578999999999999999887788999999999876543
No 303
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.62 E-value=0.012 Score=47.09 Aligned_cols=45 Identities=16% Similarity=0.117 Sum_probs=39.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+.+|+|.| +|++|..++..+...|+ +|++++|+.+|.+.+.+++
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l 171 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL 171 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 568999999 89999999999989999 8999999999888776444
No 304
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.62 E-value=0.0063 Score=47.62 Aligned_cols=38 Identities=8% Similarity=0.029 Sum_probs=32.4
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.|++++|+||+ ++||..+++.....|++|++++++++.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~ 48 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA 48 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh
Confidence 47899999987 499999998887889999999988543
No 305
>PRK06398 aldose dehydrogenase; Validated
Probab=96.62 E-value=0.0041 Score=48.66 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=33.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.|++++|+||+|++|..+++.....|++|+.++|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 4789999999999999999888889999999988754
No 306
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0079 Score=47.90 Aligned_cols=37 Identities=24% Similarity=0.263 Sum_probs=32.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
..+++++|+||+++||..+++.....|++|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 3588999999999999999987777899999988764
No 307
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0071 Score=47.52 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=34.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++|+||+|++|..+++.....|++|+++++++++.+.+.
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~ 41 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETL 41 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 6999999999999998877778999999999988766543
No 308
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.57 E-value=0.0069 Score=47.89 Aligned_cols=37 Identities=5% Similarity=0.085 Sum_probs=32.1
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASG--AVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G--~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.++++||+||++ +||..+++.....|++|+.++|+++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~ 44 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA 44 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH
Confidence 578999999886 9999999888889999999988753
No 309
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.57 E-value=0.018 Score=45.83 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=39.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g 129 (192)
..+.+++|+| +|++|..++..++..|+ +|+++.|+.++.+.+.++++
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 3578899999 79999999999999995 99999999998877764443
No 310
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.56 E-value=0.0081 Score=46.18 Aligned_cols=42 Identities=26% Similarity=0.386 Sum_probs=35.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGS-AGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~ 125 (192)
+++++|+||+|++|..++......|++|+.+ ++++++.+.+.
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~ 47 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL 47 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 5789999999999999998777789999988 88877765554
No 311
>PRK07069 short chain dehydrogenase; Validated
Probab=96.56 E-value=0.012 Score=45.35 Aligned_cols=39 Identities=15% Similarity=0.319 Sum_probs=33.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGS-KEKVDLLK 125 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-~~~~~~~~ 125 (192)
++|+||+|++|..+++.....|++|++++++ .++++.+.
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 41 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA 41 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Confidence 8999999999999998888889999999987 66555554
No 312
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.55 E-value=0.0087 Score=46.78 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=33.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG-SKEKVDL 123 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~ 123 (192)
.+++++|+||+++||..+++.....|++|+.+.+ ++++.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~ 48 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANK 48 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 5789999999999999999888888999888764 4454443
No 313
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.55 E-value=0.0062 Score=49.34 Aligned_cols=46 Identities=28% Similarity=0.429 Sum_probs=39.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKV---DLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~---~~~~~~~g 129 (192)
.+..|+|+||+|-||..++.....+|++|.+++|++++. +.++ ++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~ 53 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLE 53 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcc
Confidence 578999999999999999999999999999999998763 3466 553
No 314
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.55 E-value=0.0082 Score=46.38 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=34.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVG-SAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~-~~~~~~~~~~~ 124 (192)
.+.+++|+||+|++|+.+++.....|++|++ ..|+.++.+.+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~ 45 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEET 45 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 4689999999999999999888888998766 46776665444
No 315
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.54 E-value=0.016 Score=44.57 Aligned_cols=46 Identities=20% Similarity=0.280 Sum_probs=38.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
|++++++|++||||+.........|+++.+++.+.|+.+... +|.+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~a 50 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQA 50 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhc
Confidence 899999999999999888777788998888888888777666 5543
No 316
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.53 E-value=0.0079 Score=46.87 Aligned_cols=42 Identities=21% Similarity=0.266 Sum_probs=35.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.+.+|+|+||+|.+|..+++.+...|++|+++.|++++.+..
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 367899999999999999988777899999999988775544
No 317
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.51 E-value=0.0095 Score=46.13 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=34.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
++++|+|++|++|..+++.....|++|+.+.+++++.+.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 41 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA 41 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 47999999999999999888888999999999877655443
No 318
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.50 E-value=0.017 Score=45.10 Aligned_cols=47 Identities=15% Similarity=0.273 Sum_probs=36.3
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcC
Q 029543 83 KGEYVYVSAA--SGAVGQLVGQFAKLAGCHVVGSAGSK--EKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga--~G~iG~~~~q~a~~~Ga~Vi~~~~~~--~~~~~~~~~~g 129 (192)
.+++++|+|| +++||..+++.....|++|++++++. +..+.+.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 56 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP 56 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC
Confidence 4789999998 79999999987777899999998763 44455543444
No 319
>PRK05599 hypothetical protein; Provisional
Probab=96.50 E-value=0.0086 Score=46.51 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=33.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++|+||++++|..+++... .|++|+.++|++++++.+.
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~ 40 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLA 40 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH
Confidence 68999999999998887655 4999999999998887664
No 320
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.50 E-value=0.01 Score=43.81 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=39.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.|..|+++|+.-+||...++-....|++||++.|+++.+..+-
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV 48 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV 48 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence 5888999999999999999888888999999999999988876
No 321
>PLN02583 cinnamoyl-CoA reductase
Probab=96.48 E-value=0.0087 Score=47.93 Aligned_cols=36 Identities=25% Similarity=0.184 Sum_probs=32.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
++++|+|+||+|.+|..+++.+...|++|++++|+.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 567899999999999999998888999999999853
No 322
>PLN02686 cinnamoyl-CoA reductase
Probab=96.47 E-value=0.0099 Score=49.19 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=37.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..+++|||+||+|.+|..+++.+...|++|++++++.++.+.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45789999999999999999988888999999888876655554
No 323
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.47 E-value=0.018 Score=46.04 Aligned_cols=46 Identities=22% Similarity=0.364 Sum_probs=40.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g 129 (192)
.|++++|.| +||.+..++.-++..|+ +|+++.|+.+|.+.+.+.++
T Consensus 125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 589999999 89999999999999997 89999999999888874454
No 324
>PRK09135 pteridine reductase; Provisional
Probab=96.47 E-value=0.011 Score=45.55 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=33.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS-KEKVDL 123 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-~~~~~~ 123 (192)
.+++++|+||+|++|..+++.....|++|++++|+ +++.+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~ 46 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADA 46 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 46789999999999999998777789999999986 343433
No 325
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.46 E-value=0.01 Score=45.60 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=53.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCCee-eecCCcccHHHHHHhhccC--Cc-cccc--
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE--KVDLLKNKFGFDDA-FNYKEEPDLDVALKRMFLC--WV-DFVG-- 158 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~--~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~--g~-d~~g-- 158 (192)
|+|+||+|.+|...++.+...+.+|.+.+|++. ..+.++ ..|+..+ .|+.+. +.+.+...+ .+ -+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~----~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDP----ESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-H----HHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCH----HHHHHHHcCCceEEeecCcc
Confidence 789999999999999988888889999999864 355666 7888543 233332 223322222 12 2222
Q ss_pred ----HHHHHHHHHhhcCCC
Q 029543 159 ----IEYCRSLLLVLLFRP 173 (192)
Q Consensus 159 ----~~~~~~~~~~l~~~G 173 (192)
.+.....+++.+..|
T Consensus 76 ~~~~~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 76 HPSELEQQKNLIDAAKAAG 94 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhHHHhhhccc
Confidence 235556777777777
No 326
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.46 E-value=0.0074 Score=48.71 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=34.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
.|++|+|+||+|.+|..+++.....|.+|+++.|+.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 5789999999999999999887778999999888765443
No 327
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.44 E-value=0.016 Score=46.52 Aligned_cols=50 Identities=22% Similarity=0.262 Sum_probs=44.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.++..+++|+|++.++|++++.-++..|++|..+.|+.+|++.++++++.
T Consensus 30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l 79 (331)
T KOG1210|consen 30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELEL 79 (331)
T ss_pred cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhh
Confidence 34557999999999999999999999999999999999999999866654
No 328
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.43 E-value=0.011 Score=47.21 Aligned_cols=46 Identities=13% Similarity=0.003 Sum_probs=39.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g 129 (192)
.+++++|.| +|+.+.+++..+...|+ +|+++.|+++|.+.+.++++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 578999999 89999999988888998 89999999998888764544
No 329
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.43 E-value=0.011 Score=48.50 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=37.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..+.+|||+||+|.||..+++.....|++|++++++.++.+.+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~ 51 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLL 51 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 45779999999999999999988888999999998876655443
No 330
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.43 E-value=0.015 Score=44.45 Aligned_cols=93 Identities=19% Similarity=0.188 Sum_probs=58.3
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCe--eeecCCcccHHHHHHhh
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKNK---FGFDD--AFNYKEEPDLDVALKRM 149 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~---~g~~~--vi~~~~~~~~~~~i~~~ 149 (192)
....++++++||-.| .|.|..+..+++..+ .+|++++.+++-.+.+++. .|.+. ++.. |..+....
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g----d~~~~~~~- 142 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG----DGTLGYEE- 142 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC----CcccCCCc-
Confidence 556788999999998 345777788888765 5999999999888877743 34432 2221 11100000
Q ss_pred ccCCcc-----cccHHHHHHHHHhhcCCCeEEE
Q 029543 150 FLCWVD-----FVGIEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 150 ~~~g~d-----~~g~~~~~~~~~~l~~~G~v~~ 177 (192)
.+.+| +.-....+..++.|+++|++++
T Consensus 143 -~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi 174 (212)
T PRK13942 143 -NAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVI 174 (212)
T ss_pred -CCCcCEEEECCCcccchHHHHHhhCCCcEEEE
Confidence 01233 2223455677889999996433
No 331
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.012 Score=45.63 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=33.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA-GSKEKVDL 123 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~-~~~~~~~~ 123 (192)
.+++++|+||+|++|..+++.....|++|++.. +++++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~ 44 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEE 44 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 478999999999999999988888899988865 45555443
No 332
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.40 E-value=0.046 Score=40.27 Aligned_cols=66 Identities=14% Similarity=0.026 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCch-HHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHhcCCCeeeecC
Q 029543 68 SVTAFAGLYEICSPKKGEYVYVSAASGA-VGQLVGQFAKLAGCHVVGSAGSKEKVDL-LKNKFGFDDAFNYK 137 (192)
Q Consensus 68 ~~ta~~~l~~~~~~~~g~~VlV~Ga~G~-iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~~g~~~vi~~~ 137 (192)
...+...+.+...--.|.+|+|.| +|. +|..++..++..|++|+++.|+.+++.. ++ .+|.+|...
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l~---~aDiVIsat 95 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHTK---QADIVIVAV 95 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhCCCEEEEEECCchhHHHHHh---hCCEEEEcC
Confidence 333334343332234789999999 576 5998999999899999999988654443 33 367776643
No 333
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.40 E-value=0.0074 Score=48.73 Aligned_cols=41 Identities=10% Similarity=0.290 Sum_probs=33.9
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAA--SGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga--~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
.|+++||+|| ++|||..+++.....|++|++ .++.++++.+
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~ 50 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIF 50 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHH
Confidence 5899999998 799999999999899999988 5565555444
No 334
>PLN02476 O-methyltransferase
Probab=96.40 E-value=0.055 Score=43.11 Aligned_cols=98 Identities=16% Similarity=0.070 Sum_probs=66.0
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhc-
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMF- 150 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~- 150 (192)
...+....++||=+| .++|..++.+|+.++ .+|+.++.++++.+.+++ +.|..+-|+.... +..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence 344566788999998 467888888888763 489999999998888864 3476543443333 4445444431
Q ss_pred ---cCCc-----cccc---HHHHHHHHHhhcCCCeEEE
Q 029543 151 ---LCWV-----DFVG---IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 151 ---~~g~-----d~~g---~~~~~~~~~~l~~~G~v~~ 177 (192)
.+.+ |+-- .+.++.+++.|++||++++
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1223 4432 2478899999999997655
No 335
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.39 E-value=0.028 Score=43.42 Aligned_cols=47 Identities=21% Similarity=0.331 Sum_probs=36.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG-SKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~~~~g 129 (192)
.+++++|+||+|++|..+++.....|++|+.+.+ ++++.+.+.++++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 3678999999999999999888888999887654 5555555553454
No 336
>PRK12743 oxidoreductase; Provisional
Probab=96.37 E-value=0.013 Score=45.72 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=32.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG-SKEKVDL 123 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~ 123 (192)
+++++|+||+|++|..+++.+...|++|+.+.+ +.++.+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~ 42 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKE 42 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHH
Confidence 578999999999999999988889999988764 4444433
No 337
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.37 E-value=0.011 Score=52.89 Aligned_cols=43 Identities=19% Similarity=0.300 Sum_probs=37.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+++++|+||+|+||..+++.....|++|++++++.++.+.+.
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~ 455 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVA 455 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888888999999999988766554
No 338
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.36 E-value=0.015 Score=44.81 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=28.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA 115 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 115 (192)
.+++++|+|++|++|..+++.....|++|++..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~ 34 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGC 34 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEc
Confidence 367899999999999999988888899887754
No 339
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.011 Score=52.34 Aligned_cols=42 Identities=29% Similarity=0.324 Sum_probs=37.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++++|+||+|++|..+++.....|++|++++|++++++.+.
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 412 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELV 412 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 678999999999999999877778999999999988876654
No 340
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=96.35 E-value=0.051 Score=44.08 Aligned_cols=58 Identities=24% Similarity=0.269 Sum_probs=49.7
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeee
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFN 135 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~ 135 (192)
+...+.||.++||-.-+|..|..++.+|+.+|+++|++.. +.+|...++ .+|+..+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEEEec
Confidence 4567899999999999999999999999999999888764 357888888 999976654
No 341
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.34 E-value=0.015 Score=45.39 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=31.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++++|+||+|++|..+++.....|++|+.+.++.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 578999999999999999998888999988887753
No 342
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.0076 Score=46.10 Aligned_cols=38 Identities=24% Similarity=0.251 Sum_probs=33.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.+++++|+||+|++|..+++.....|++|++++|++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 36789999999999999998888889999999987543
No 343
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.31 E-value=0.024 Score=45.38 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=38.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~ 128 (192)
..+++++|.| +||.+++++..+...|+ +++++.|+.+|.+.+.+++
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 3478999999 89999999887777898 8999999999888876444
No 344
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.29 E-value=0.0078 Score=47.09 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=33.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.+++++|+||+|++|..+++.....|++|+.+++++++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 47899999999999999999888889999998877543
No 345
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.015 Score=45.11 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=33.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGS-AGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~ 124 (192)
.+.+++|+||+|++|..+++.....|++|++. .|+.++.+.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~ 47 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADET 47 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 36799999999999999998887789988764 6776665444
No 346
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.29 E-value=0.012 Score=45.06 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=31.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.+.+++|+|++|++|..+++.+...|++|+++.+++.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4578999999999999999988888999877777654
No 347
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.28 E-value=0.012 Score=47.15 Aligned_cols=92 Identities=18% Similarity=0.077 Sum_probs=55.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCeeeecCCcccHHHHHHhhccCCcc-
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDVALKRMFLCWVD- 155 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~g~d- 155 (192)
..++++||-.| +|+ |.+++.+++ .|+ +|++++.++..++.+++.. +....+..... +.. ....+.+|
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~----~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLE----QPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccc----cccCCCceE
Confidence 45789999999 777 888877766 576 9999999999888877322 22211111111 111 11111233
Q ss_pred ----cccH---HHHHHHHHhhcCCCeEEE-eeC
Q 029543 156 ----FVGI---EYCRSLLLVLLFRPLKIM-END 180 (192)
Q Consensus 156 ----~~g~---~~~~~~~~~l~~~G~v~~-G~~ 180 (192)
.... ..+..+.+.|+|+|++++ |..
T Consensus 229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 2222 366778899999996544 543
No 348
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.27 E-value=0.013 Score=45.62 Aligned_cols=43 Identities=33% Similarity=0.394 Sum_probs=34.1
Q ss_pred EEEEeCCCchHHHHHHH-HHHH---cCCEEEEEeCCHHHHHHHHHhc
Q 029543 86 YVYVSAASGAVGQLVGQ-FAKL---AGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q-~a~~---~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.++|+||+++||..+++ +++. .|++|+.+.|++++++.+.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 58999999999997775 5542 6999999999988877765343
No 349
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.27 E-value=0.078 Score=41.44 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=66.6
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeeecCCcccHHHHHHhhcc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--HVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDVALKRMFL 151 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 151 (192)
...++.+|++|+=.| + |.|.+++-+|++.|- +|+.....+++.+.+++. +|....+..... |+.+.+.+..-
T Consensus 88 ~~~gi~pg~rVlEAG-t-GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~~~~v 164 (256)
T COG2519 88 ARLGISPGSRVLEAG-T-GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGIDEEDV 164 (256)
T ss_pred HHcCCCCCCEEEEcc-c-CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccccccc
Confidence 457899999999887 3 458899999998765 899999999999988754 344432322222 44333322211
Q ss_pred CCc--cccc-HHHHHHHHHhhcCCCeEEEe
Q 029543 152 CWV--DFVG-IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 152 ~g~--d~~g-~~~~~~~~~~l~~~G~v~~G 178 (192)
+.+ |.-- .+.++.+.+.|+|+|.+.+-
T Consensus 165 Dav~LDmp~PW~~le~~~~~Lkpgg~~~~y 194 (256)
T COG2519 165 DAVFLDLPDPWNVLEHVSDALKPGGVVVVY 194 (256)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEE
Confidence 111 5544 56889999999999965443
No 350
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.26 E-value=0.016 Score=44.42 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=32.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG-SKEKVDL 123 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~ 123 (192)
++++|+||+|++|..+++.....|++|+++.+ ++++.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~ 40 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEA 40 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 47899999999999999888888999998887 5554443
No 351
>PRK04457 spermidine synthase; Provisional
Probab=96.26 E-value=0.1 Score=41.23 Aligned_cols=93 Identities=13% Similarity=0.068 Sum_probs=59.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCC---eeeecCCcccHHHHHHhhccC-Cc--
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDVALKRMFLC-WV-- 154 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~-g~-- 154 (192)
...++||++| +| .|.++..+++... .+|++++.+++-.+.+++.++.. .-+..... |..+.+.+.... .+
T Consensus 65 ~~~~~vL~IG-~G-~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~~~~yD~I~ 141 (262)
T PRK04457 65 PRPQHILQIG-LG-GGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVHRHSTDVIL 141 (262)
T ss_pred CCCCEEEEEC-CC-HhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhCCCCCCEEE
Confidence 3567899999 44 3778888888764 59999999999999988545431 11111222 444444432211 11
Q ss_pred -ccc---c-------HHHHHHHHHhhcCCCeEEE
Q 029543 155 -DFV---G-------IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 155 -d~~---g-------~~~~~~~~~~l~~~G~v~~ 177 (192)
|.- + .+.++.+.+.|+|+|++++
T Consensus 142 ~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 142 VDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 321 1 3578889999999996554
No 352
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.26 E-value=0.025 Score=44.31 Aligned_cols=64 Identities=13% Similarity=0.266 Sum_probs=41.0
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhcCCCe--eeecCCcccHHHHH
Q 029543 83 KGEYVYVSAA--SGAVGQLVGQFAKLAGCHVVGSAGS---KEKVDLLKNKFGFDD--AFNYKEEPDLDVAL 146 (192)
Q Consensus 83 ~g~~VlV~Ga--~G~iG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i 146 (192)
.+++++|+|| +++||..+++.....|++|+.+.+. +++++.+.++++... ..|..+++++.+.+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 75 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALF 75 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHH
Confidence 5789999996 5799999888777789999887643 344444443445322 24544432343333
No 353
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.25 E-value=0.011 Score=47.84 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=34.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
.+++|||+||+|.||..+++.+...|++|++++++.++.+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~ 43 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRK 43 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchh
Confidence 4789999999999999999888888999998887765443
No 354
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.24 E-value=0.027 Score=45.19 Aligned_cols=45 Identities=18% Similarity=0.226 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSK---EKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~---~~~~~~~~~~ 128 (192)
.+++++|+| +||+|..++..+...|+ +|+++.|++ ++.+.+.+++
T Consensus 125 ~~k~vlI~G-AGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 125 KGKKLTVIG-AGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 578999999 59999998888888899 599999986 5555544344
No 355
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.033 Score=41.63 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=26.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
+++|+||+|++|..++...... ++|+.++|++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~ 33 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS 33 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence 6899999999999888766555 8899888754
No 356
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.0098 Score=46.96 Aligned_cols=37 Identities=24% Similarity=0.404 Sum_probs=32.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
.+++++|+||+|++|..+++.+...|++|++++|+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 4689999999999999999888888999999998754
No 357
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.20 E-value=0.045 Score=41.55 Aligned_cols=96 Identities=15% Similarity=0.086 Sum_probs=57.6
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeeecCCcccHHHHHHhhcc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDVALKRMFL 151 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 151 (192)
+...+.++++||=.| + |.|..+..+++..+ .+|++++.+++-.+.+++. .+....+..... +..+.....
T Consensus 66 ~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~~~-- 140 (205)
T PRK13944 66 ELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLEKH-- 140 (205)
T ss_pred HhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCccC--
Confidence 556778899999998 4 45778888888764 5999999999877776632 343211111111 211111110
Q ss_pred CCcc-----cccHHHHHHHHHhhcCCCeEEE
Q 029543 152 CWVD-----FVGIEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 152 ~g~d-----~~g~~~~~~~~~~l~~~G~v~~ 177 (192)
+.+| .+.....+..++.|+++|++++
T Consensus 141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi 171 (205)
T PRK13944 141 APFDAIIVTAAASTIPSALVRQLKDGGVLVI 171 (205)
T ss_pred CCccEEEEccCcchhhHHHHHhcCcCcEEEE
Confidence 1223 3333455677899999996543
No 358
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.19 E-value=0.0096 Score=48.80 Aligned_cols=49 Identities=14% Similarity=0.097 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 70 TAFAGLYEICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 70 ta~~~l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
|||.-+.....+ .+++|+|+||+|-+|..++......|.+|+++++...
T Consensus 2 ~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred chhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 677766443333 4579999999999999999988888999999997543
No 359
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.19 E-value=0.011 Score=48.42 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=34.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKV 121 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~ 121 (192)
.|.+|||+||+|.+|..+++.+...|.+|++++|++...
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~ 41 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS 41 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 468999999999999999998888899999999876543
No 360
>PRK05855 short chain dehydrogenase; Validated
Probab=96.16 E-value=0.017 Score=50.18 Aligned_cols=43 Identities=21% Similarity=0.248 Sum_probs=37.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+.+++|+||+|++|..+++.....|++|+.++|++++.+.+.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~ 356 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTA 356 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4678999999999999988888788999999999988776654
No 361
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.15 E-value=0.04 Score=46.50 Aligned_cols=47 Identities=15% Similarity=0.230 Sum_probs=41.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g 129 (192)
-.+.+|+|.| +|++|.+++..+...|+ +++++.|+.+|.+.+.++++
T Consensus 179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~ 226 (414)
T PRK13940 179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR 226 (414)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc
Confidence 3678999999 89999999998888998 89999999998887775675
No 362
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.15 E-value=0.015 Score=46.61 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=34.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~ 128 (192)
|||+||+|.||.-+++-....+. +++.+++++.++-.+++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l 43 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELEREL 43 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHC
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHH
Confidence 79999999999988866666666 8999999999888887666
No 363
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.14 E-value=0.017 Score=45.31 Aligned_cols=36 Identities=6% Similarity=0.143 Sum_probs=30.5
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAA--SGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga--~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++++|+|| +++||..+++.....|++|+.+.+++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~ 42 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD 42 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH
Confidence 5789999996 67999999988878899999887654
No 364
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.14 E-value=0.033 Score=46.36 Aligned_cols=42 Identities=26% Similarity=0.308 Sum_probs=37.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhc
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+|||+| +|+||+.+++.+.+.+ .+|++++|+.++.+.+. ..
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~ 44 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-EL 44 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hh
Confidence 5799999 6999999999988888 59999999999988887 44
No 365
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.13 E-value=0.019 Score=47.05 Aligned_cols=47 Identities=23% Similarity=0.384 Sum_probs=38.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAK-LAGC-HVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~-~~Ga-~Vi~~~~~~~~~~~~~~~~g 129 (192)
.+.+|+|+||+|.+|..+++... ..|. +++.+.|++++++.+.++++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~ 202 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG 202 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc
Confidence 57899999999999998887775 4576 89999999888888764554
No 366
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.0099 Score=45.86 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=31.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
+++|+||+|++|..+++.....|++|++++|+.++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~ 37 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP 37 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence 69999999999999998877789999999988654
No 367
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.09 E-value=0.046 Score=43.33 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=37.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
..+++++|+| +|++|..++......|++|++++|++++.+.+.+++
T Consensus 115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~ 160 (270)
T TIGR00507 115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERF 160 (270)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4578999999 699999998877778999999999988876665343
No 368
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.08 E-value=0.014 Score=45.69 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=35.3
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhc
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGS---KEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~~ 128 (192)
.|++++|+||+ ++||..+++.....|++|+.++|+ +++++.+.+++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~ 56 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL 56 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc
Confidence 47899999987 799999988777789999998765 34455554344
No 369
>PRK07985 oxidoreductase; Provisional
Probab=96.07 E-value=0.019 Score=45.98 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=31.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.+++++|+||+|+||..+++.....|++|+++.++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 57899999999999999998888889999988754
No 370
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.07 E-value=0.053 Score=40.45 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=35.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
+|.|+||+|-+|..+++=|+.+|-.|++++|++.|+...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~ 40 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR 40 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc
Confidence 588999999999999999999999999999999987654
No 371
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.045 Score=41.43 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=34.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..+++|+||+|.+|..++..+... .+|++++|++++.+.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~ 43 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELA 43 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHH
Confidence 368999999999999888766666 89999999988776665
No 372
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.05 E-value=0.12 Score=41.63 Aligned_cols=61 Identities=23% Similarity=0.233 Sum_probs=48.7
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHhcCCCeeeecCCc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA---GSKEKVDLLKNKFGFDDAFNYKEE 139 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~---~~~~~~~~~~~~~g~~~vi~~~~~ 139 (192)
+...+++|++ +|-+-+|..|..++.+|+++|++++.+. .|++|.+.++ .+|+..++....+
T Consensus 55 ~~G~l~pG~t-IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~t~~~~ 118 (300)
T COG0031 55 KRGLLKPGGT-IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVILTPGAP 118 (300)
T ss_pred HcCCCCCCCE-EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEcCCCC
Confidence 4567999995 4555599999999999999999877765 4678999999 9999877665533
No 373
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.02 E-value=0.044 Score=41.34 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=38.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.+.++|+|++++||.+..|.....|++|++.+++....+.....++.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 46689999999999999999999999999999876655444336665
No 374
>PLN02650 dihydroflavonol-4-reductase
Probab=96.02 E-value=0.017 Score=47.20 Aligned_cols=42 Identities=24% Similarity=0.230 Sum_probs=35.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 124 (192)
..++|||+||+|.||..++..+...|.+|++++++.++.+.+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV 45 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence 356899999999999999988888899999999886655443
No 375
>PLN00015 protochlorophyllide reductase
Probab=96.02 E-value=0.031 Score=44.95 Aligned_cols=42 Identities=21% Similarity=0.230 Sum_probs=34.5
Q ss_pred EEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC
Q 029543 88 YVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 88 lV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g 129 (192)
+|+||+++||..+++.....| ++|+.++|++++.+.+.++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 589999999999888777789 899999999887776654543
No 376
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.02 E-value=0.015 Score=46.82 Aligned_cols=38 Identities=21% Similarity=0.306 Sum_probs=33.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.+.+|||+||+|.+|..++..+...|.+|++++++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 36789999999999999998888889999999887654
No 377
>PRK06128 oxidoreductase; Provisional
Probab=96.01 E-value=0.017 Score=46.21 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.++++||+||+|+||..+++.....|++|+++.++.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~ 89 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPE 89 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc
Confidence 478999999999999999988888899998887653
No 378
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.99 E-value=0.012 Score=47.26 Aligned_cols=45 Identities=22% Similarity=0.189 Sum_probs=36.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD 131 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~ 131 (192)
+|+|+||+|.+|..+++.....|.+|++++|++++...+. ..+..
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~ 46 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVE 46 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCce
Confidence 6999999999999999988888999999999876654443 34443
No 379
>PLN03075 nicotianamine synthase; Provisional
Probab=95.98 E-value=0.12 Score=41.57 Aligned_cols=97 Identities=10% Similarity=-0.015 Sum_probs=63.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCC----CeeeecCCcccHHHHHHhhccCCc--
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLA--GCHVVGSAGSKEKVDLLKNKFGF----DDAFNYKEEPDLDVALKRMFLCWV-- 154 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~g~-- 154 (192)
+.++|+-.| +|+.|+.++-+++.. +.+++.+|.+++..+.+++.+.. ..-+..... |..+..... +.+
T Consensus 123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~l--~~FDl 198 (296)
T PLN03075 123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTESL--KEYDV 198 (296)
T ss_pred CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhccccc--CCcCE
Confidence 679999999 999999888877654 44899999999999988843322 222222222 332211111 122
Q ss_pred ---cc------cc-HHHHHHHHHhhcCCCeEEEeeCCCC
Q 029543 155 ---DF------VG-IEYCRSLLLVLLFRPLKIMENDSGS 183 (192)
Q Consensus 155 ---d~------~g-~~~~~~~~~~l~~~G~v~~G~~~~~ 183 (192)
++ .. ...++...+.|+|||++++|...|.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~~~G~ 237 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRSAHGA 237 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEecccch
Confidence 21 12 3488999999999999888875553
No 380
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.16 Score=37.65 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=53.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--e--eecCCcccHHHHHHhhcc--CCc----
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFD-D--A--FNYKEEPDLDVALKRMFL--CWV---- 154 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~--v--i~~~~~~~~~~~i~~~~~--~g~---- 154 (192)
+++|+||+|-+|. +++.....|++|++.+|++++.+.++..++.. . . .|..+++++.+.+.+... +.+
T Consensus 2 ~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 5899998754444 55555557999999999988877665334321 1 1 366654345544443321 122
Q ss_pred c---cccHHHHHHHHHhhcCC----CeE-EEeeCCC
Q 029543 155 D---FVGIEYCRSLLLVLLFR----PLK-IMENDSG 182 (192)
Q Consensus 155 d---~~g~~~~~~~~~~l~~~----G~v-~~G~~~~ 182 (192)
+ ..+...+..+.+...-. .++ ++|....
T Consensus 81 ~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~ 116 (177)
T PRK08309 81 AWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAAS 116 (177)
T ss_pred EeccccchhhHHHHHHHHccCCCCceEEEEeCCcCC
Confidence 2 22344555555544433 245 5676654
No 381
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.022 Score=43.81 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=31.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+.+++|+|++|++|..+++.....|++++.+.++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 478999999999999999998888899888777653
No 382
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.95 E-value=0.089 Score=39.46 Aligned_cols=88 Identities=16% Similarity=0.057 Sum_probs=54.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhccCCc--
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFLCWV-- 154 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~g~-- 154 (192)
++++.+|+-.| +| .|..+..+++.. +++|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.+
T Consensus 43 l~~g~~VLDiG-cG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVG-SG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEc-CC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCccE
Confidence 45689999998 33 456666666654 5699999999988777763 345543 222222 3322 111 1123
Q ss_pred ---cccc--HHHHHHHHHhhcCCCeE
Q 029543 155 ---DFVG--IEYCRSLLLVLLFRPLK 175 (192)
Q Consensus 155 ---d~~g--~~~~~~~~~~l~~~G~v 175 (192)
++.+ ...++.+.+.|+|+|++
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG~l 141 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGGRF 141 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCeEE
Confidence 3333 24778889999999954
No 383
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.94 E-value=0.022 Score=43.63 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=30.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
+..+|+|+||+|++|..+++.+...|++|+++.++.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~ 41 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE 41 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 3568999999999999999988889998877666543
No 384
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.94 E-value=0.025 Score=43.97 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=31.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.|++++|+|++|+||..+++.....|++|+.+++++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~ 44 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE 44 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc
Confidence 478999999999999999998888899999887654
No 385
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.93 E-value=0.063 Score=38.44 Aligned_cols=48 Identities=25% Similarity=0.314 Sum_probs=38.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAG-CHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
..+.+++|+| +|.+|...++..+..| .+|++.++++++.+.+.++++.
T Consensus 17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~ 65 (155)
T cd01065 17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE 65 (155)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 4578999999 6999999998888786 5899999998887765535554
No 386
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.93 E-value=0.19 Score=37.63 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=58.7
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhcc-
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFL- 151 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~- 151 (192)
....+.++++|+=.| .|.|..+..+++.. +.+|++++.+++..+.+++ +++.+.+ ..... +..+.+.....
T Consensus 34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~~~ 109 (196)
T PRK07402 34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLAPA 109 (196)
T ss_pred HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCCCC
Confidence 455777889888777 34455666677654 4699999999998888763 3455432 11111 33222222211
Q ss_pred -CCc--cccc--HHHHHHHHHhhcCCCeEEEe
Q 029543 152 -CWV--DFVG--IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 152 -~g~--d~~g--~~~~~~~~~~l~~~G~v~~G 178 (192)
+.+ +... ...++.+.+.|+|+|++++.
T Consensus 110 ~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~ 141 (196)
T PRK07402 110 PDRVCIEGGRPIKEILQAVWQYLKPGGRLVAT 141 (196)
T ss_pred CCEEEEECCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 111 3222 35788888999999965443
No 387
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.90 E-value=0.029 Score=45.13 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=31.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.|++++|+||+++||..+++.....|++|++.+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 47899999999999999988777789999998875
No 388
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.028 Score=44.44 Aligned_cols=40 Identities=28% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+++++|+|| |+||..+++... .|++|+.++|++++++.+.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~ 41 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA 41 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH
Confidence 467899995 899999887774 7999999999987766554
No 389
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.034 Score=43.25 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS-KEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-~~~~~~~ 124 (192)
.+.+++|+||+|++|..+++.+...|++|++++++ .++.+.+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~ 50 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEAL 50 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 46789999999999999998888889988877654 4444433
No 390
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.88 E-value=0.027 Score=44.28 Aligned_cols=36 Identities=11% Similarity=0.191 Sum_probs=30.7
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASG--AVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G--~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.|++++|+||++ +||..+++.....|++|+.+++++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~ 42 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 42 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch
Confidence 578999999875 899988887777899999888773
No 391
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.86 E-value=0.019 Score=48.02 Aligned_cols=41 Identities=29% Similarity=0.293 Sum_probs=35.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
+...+.+|+|+||+|.+|..+++.+...|.+|++++|+.++
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence 44567899999999999999998888889999999998754
No 392
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.027 Score=44.98 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=32.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
..+.+++|+||+|++|..+++.....|++|+.+++++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~ 80 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE 80 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3578999999999999999987777899999998874
No 393
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.85 E-value=0.019 Score=44.50 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=30.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
++++|+||+|++|..+++.....|++|++++++.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence 5799999999999999988888899999998764
No 394
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.83 E-value=0.018 Score=44.13 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=31.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++++|+|++|++|..+++.....|++|+++++++
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~ 39 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQD 39 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999988778899999988764
No 395
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.82 E-value=0.037 Score=42.67 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=32.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG-SKEKVDLL 124 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~ 124 (192)
.+++++|+||+|++|..+++.....|++|+++.+ ++++.+.+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~ 47 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL 47 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH
Confidence 4789999999999999999877788998877654 44444433
No 396
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.81 E-value=0.022 Score=43.98 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++++|+||+|++|..+++.....|++|++++++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 478999999999999999988888899999999876
No 397
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.81 E-value=0.015 Score=47.26 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=32.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
++.+|||+||+|.+|..+++.+...|++|++++++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4688999999999999999988888999999987643
No 398
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.79 E-value=0.029 Score=43.08 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=31.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGS-AGSKEKVDLL 124 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~ 124 (192)
++++|+||+|++|..+++.....|++|+++ .+++++.+.+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~ 42 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEV 42 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHH
Confidence 479999999999999998888889988764 5666655433
No 399
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.79 E-value=0.016 Score=47.30 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=31.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
++|||+||+|.||..+++.+...|.+|++++|+++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 47999999999999999988888999999998753
No 400
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.79 E-value=0.048 Score=42.66 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=29.2
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.|++++|+||+ ++||..+++.....|++|+.+.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 47899999975 799999998877889999887543
No 401
>PRK08317 hypothetical protein; Provisional
Probab=95.79 E-value=0.12 Score=39.48 Aligned_cols=47 Identities=28% Similarity=0.382 Sum_probs=39.8
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~ 125 (192)
+...+.++++||-.| +|. |..+..+++..+ .++++++.+++.++.++
T Consensus 13 ~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~ 61 (241)
T PRK08317 13 ELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAK 61 (241)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Confidence 556788899999999 665 888999998763 58999999999888887
No 402
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.78 E-value=0.06 Score=41.10 Aligned_cols=96 Identities=19% Similarity=0.146 Sum_probs=58.8
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhcc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--HVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFL 151 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 151 (192)
+...++++++||-.| .|.|..++.+++..+. +|++++.+++-.+.+++ ++|.+.+- .... +..+.....
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~-d~~~~~~~~-- 144 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVG-DGTQGWEPL-- 144 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEEC-CcccCCccc--
Confidence 556788999999998 3457777888887653 79999999988887763 34544321 1111 221111110
Q ss_pred CCc-----ccccHHHHHHHHHhhcCCCeEEEe
Q 029543 152 CWV-----DFVGIEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 152 ~g~-----d~~g~~~~~~~~~~l~~~G~v~~G 178 (192)
..+ +..-.......++.|+++|++++.
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 123 332334556778999999965443
No 403
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.033 Score=42.81 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=29.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG 116 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~ 116 (192)
.+.+++|+||+|++|..+++.....|++|+.+++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 3678999999999999999888888999888654
No 404
>PLN02214 cinnamoyl-CoA reductase
Probab=95.77 E-value=0.026 Score=46.23 Aligned_cols=38 Identities=21% Similarity=0.334 Sum_probs=33.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.+.+|+|+||+|.+|..+++.+...|.+|++++|+.++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 57789999999999999998888889999999987654
No 405
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.77 E-value=0.029 Score=42.69 Aligned_cols=96 Identities=18% Similarity=0.110 Sum_probs=63.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhccC--
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLA--GCHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFLC-- 152 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~-- 152 (192)
+...-++||-+| ..+|..++.+|+.+ +.+|+.++.++++.+.+++ +.|.+.-|+.... +..+.+.++...
T Consensus 42 ~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~~~ 118 (205)
T PF01596_consen 42 RLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELANDGE 118 (205)
T ss_dssp HHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHTTT
T ss_pred HhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhccC
Confidence 334567899999 56788999999876 5699999999999888863 3465443433333 444555443221
Q ss_pred --Cc-----cccc---HHHHHHHHHhhcCCCeEEEe
Q 029543 153 --WV-----DFVG---IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 153 --g~-----d~~g---~~~~~~~~~~l~~~G~v~~G 178 (192)
.+ |+-- ...++.+++.|++||.+++-
T Consensus 119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 119 EGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp TTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 23 4432 24788899999999977653
No 406
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.75 E-value=0.08 Score=44.20 Aligned_cols=37 Identities=32% Similarity=0.358 Sum_probs=33.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
-.|.+|.|.| .|.+|+.+++.+...|++|++++.+..
T Consensus 205 l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 205 LEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred cCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3799999999 999999999999888999999988776
No 407
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.74 E-value=0.034 Score=47.59 Aligned_cols=52 Identities=21% Similarity=0.315 Sum_probs=42.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH---------------------HHHHHHHHhcCCCeeeec
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK---------------------EKVDLLKNKFGFDDAFNY 136 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~---------------------~~~~~~~~~~g~~~vi~~ 136 (192)
.+++|+|+| +|+.|+.++..++..|.+|++.++.+ ...+.++ ++|++..++.
T Consensus 140 ~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~-~~Gv~~~~~~ 212 (467)
T TIGR01318 140 TGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFT-AMGIEFHLNC 212 (467)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHH-HCCCEEECCC
Confidence 578999999 89999999999999999998888654 2456677 8888655543
No 408
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.74 E-value=0.035 Score=42.79 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=31.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSA-GSKEKVDLL 124 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~-~~~~~~~~~ 124 (192)
++++|+||+|++|..+++.....|++|+++. +++++.+.+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~ 43 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEET 43 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 5799999999999999988888899887664 555554443
No 409
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.041 Score=42.39 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=31.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHH
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSA-GSKEKVDL 123 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~-~~~~~~~~ 123 (192)
+.+++|+|++|++|..+++.....|++|+... +++++.+.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~ 42 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEA 42 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHH
Confidence 46899999999999998887777899877765 44444433
No 410
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=95.73 E-value=0.19 Score=39.33 Aligned_cols=43 Identities=23% Similarity=0.246 Sum_probs=35.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Q 029543 81 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKN 126 (192)
Q Consensus 81 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~ 126 (192)
+.++++|+-.| +|. |.+++.+++ .|+ +|++++.++..++.+++
T Consensus 117 ~~~~~~VLDiG-cGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~ 160 (250)
T PRK00517 117 VLPGKTVLDVG-CGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARE 160 (250)
T ss_pred cCCCCEEEEeC-CcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHH
Confidence 56899999999 777 887776555 577 69999999998888873
No 411
>PRK14967 putative methyltransferase; Provisional
Probab=95.72 E-value=0.24 Score=38.03 Aligned_cols=46 Identities=22% Similarity=0.174 Sum_probs=37.6
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLK 125 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~ 125 (192)
....+.++++||-.| +|. |.++..+++. ++ +|++++.+++.++.++
T Consensus 30 ~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~ 76 (223)
T PRK14967 30 AAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSAR 76 (223)
T ss_pred HhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHH
Confidence 334577899999999 776 8888888875 66 9999999998888766
No 412
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.72 E-value=0.033 Score=43.69 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=32.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS-KEKVDLL 124 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-~~~~~~~ 124 (192)
.+++|+||+++||+.+++.....|++|+++.++ +++++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~ 42 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTL 42 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Confidence 478999999999999998888899999987654 4555444
No 413
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.72 E-value=0.034 Score=45.12 Aligned_cols=43 Identities=7% Similarity=0.020 Sum_probs=33.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~ 125 (192)
.|.+|||+||+|.+|..+++.+...| .+|++.+++..+.+.+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~ 47 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQ 47 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHH
Confidence 47889999999999999987766665 58999998776554443
No 414
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.70 E-value=0.013 Score=46.36 Aligned_cols=36 Identities=8% Similarity=0.196 Sum_probs=32.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKV 121 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~ 121 (192)
+|+|+||+|.+|..+++.+...|.+|.+.+|++++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~ 36 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS 36 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence 489999999999999988888899999999998753
No 415
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.69 E-value=0.14 Score=39.80 Aligned_cols=92 Identities=16% Similarity=0.235 Sum_probs=60.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eeecCCcccHHHHHHhhccCCc-----
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDVALKRMFLCWV----- 154 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~g~----- 154 (192)
-+|.+||=.|+.| |+++.-+|+ .|++|+++|.+++.++.++ ...... -+||... ...+ +.... +.+
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~-~~ed-l~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA-TVED-LASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchhh-hHHH-HHhcC-CCccEEEE
Confidence 3788999999544 466666665 5899999999999999987 332221 2567654 3332 32221 122
Q ss_pred ----cccc--HHHHHHHHHhhcCCCeEEEeeC
Q 029543 155 ----DFVG--IEYCRSLLLVLLFRPLKIMEND 180 (192)
Q Consensus 155 ----d~~g--~~~~~~~~~~l~~~G~v~~G~~ 180 (192)
+.+- ...+..+.+++||+|.+++...
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~STi 162 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLSTI 162 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence 3444 2377889999999997766543
No 416
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.68 E-value=0.049 Score=43.00 Aligned_cols=52 Identities=23% Similarity=0.260 Sum_probs=37.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHhcCCCeeeecC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK------EKVDLLKNKFGFDDAFNYK 137 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~------~~~~~~~~~~g~~~vi~~~ 137 (192)
+|||+||+|.+|..+++.+...|.+|++++|+. +.++.+.+....|.+++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a 58 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTA 58 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECC
Confidence 489999999999999998888899999998752 2222222134457777643
No 417
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.63 E-value=0.079 Score=34.74 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=37.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHhcCCC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAG---CHVVGS-AGSKEKVDLLKNKFGFD 131 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~-~~~~~~~~~~~~~~g~~ 131 (192)
+|.++| +|.+|..+++-....| .+|+.+ +|++++.+.++++++..
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~ 49 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQ 49 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccc
Confidence 477888 9999999998888888 788855 99999999987577753
No 418
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=95.60 E-value=0.088 Score=39.02 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=39.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHhcCCCee---eecCCcccHHHHHHh
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSK-------EKVDLLKNKFGFDDA---FNYKEEPDLDVALKR 148 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~-------~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~ 148 (192)
+++|+|+.|++|+.+++.....++ +++.+.|+. +..+.++ +.|.... +|..+..++.+.+.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~ 74 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQ 74 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHH
Confidence 689999999999999988888877 999999982 2344445 5566422 344443244444433
No 419
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.60 E-value=0.051 Score=40.47 Aligned_cols=39 Identities=23% Similarity=0.246 Sum_probs=32.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+|.|.| +|.+|...++++...|.+|+..+++++.++..+
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 589999 799999999888888999999999998766654
No 420
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.03 Score=42.64 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=33.0
Q ss_pred EEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 88 YVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 88 lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+|+||+|++|..+++.....|++|++++|++++.+.+.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~ 38 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAA 38 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 58999999999999887788999999999987766654
No 421
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.57 E-value=0.25 Score=38.78 Aligned_cols=97 Identities=13% Similarity=0.053 Sum_probs=65.5
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhcc--
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMFL-- 151 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~-- 151 (192)
.+...-++||-+| ..+|..++.+|+.. +.+|+.++.++++.+.+++ +.|...-|+.... +..+.+.++..
T Consensus 75 ~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~~~ 151 (247)
T PLN02589 75 LKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIEDG 151 (247)
T ss_pred HHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHhcc
Confidence 3444567899998 47888888899876 4699999999988887763 3465444444433 55555554321
Q ss_pred ---CCc-----cccc---HHHHHHHHHhhcCCCeEEEe
Q 029543 152 ---CWV-----DFVG---IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 152 ---~g~-----d~~g---~~~~~~~~~~l~~~G~v~~G 178 (192)
+.+ |+-- ...++.+++.+++||++++-
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~D 189 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYD 189 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEc
Confidence 223 4332 24788899999999976653
No 422
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.57 E-value=0.088 Score=42.24 Aligned_cols=46 Identities=13% Similarity=0.234 Sum_probs=34.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSK---EKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~---~~~~~~~~~~g 129 (192)
.+++++|.| +||.+++++..+...|+ +|+++.|++ +|.+.+.++++
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 578999999 78889877766667798 899999984 46665553443
No 423
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=95.53 E-value=0.037 Score=42.45 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=30.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGS-KEKVDLL 124 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-~~~~~~~ 124 (192)
++|+||+|++|..+++.....|++|++++++ +++.+.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~ 39 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESV 39 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 5899999999999998888889999888765 3444333
No 424
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.52 E-value=0.031 Score=45.43 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=32.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.+.+|||+||+|.+|..+++.....|++|++++++.++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~ 45 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN 45 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 37899999999999999998888889999888877544
No 425
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.51 E-value=0.027 Score=43.98 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=36.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
+|||+||+|.+|...++-+...|.+|.+.+|++++.....
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 6899999999999999988888999999999998877765
No 426
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.49 E-value=0.14 Score=39.87 Aligned_cols=97 Identities=21% Similarity=0.220 Sum_probs=61.8
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC---CCeeeecCCcccHHHHHHhhccC
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG---FDDAFNYKEEPDLDVALKRMFLC 152 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~i~~~~~~ 152 (192)
......+|++||=.+ +|.|-++..+++..|- +|+++|.|+.-++.++++.. ... +..-.. |.. .+- .++
T Consensus 45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dAe-~LP--f~D 117 (238)
T COG2226 45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DAE-NLP--FPD 117 (238)
T ss_pred HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-chh-hCC--CCC
Confidence 344556899998775 6789999999999876 99999999998888875432 221 111111 111 000 111
Q ss_pred -Ccc----------ccc-HHHHHHHHHhhcCCCeE-EEeeC
Q 029543 153 -WVD----------FVG-IEYCRSLLLVLLFRPLK-IMEND 180 (192)
Q Consensus 153 -g~d----------~~g-~~~~~~~~~~l~~~G~v-~~G~~ 180 (192)
.+| ..- ...+.+..+.|+|+|++ ++-..
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~ 158 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS 158 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence 222 222 24889999999999964 44444
No 427
>PLN02427 UDP-apiose/xylose synthase
Probab=95.47 E-value=0.041 Score=45.72 Aligned_cols=43 Identities=16% Similarity=0.121 Sum_probs=35.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~ 125 (192)
...+|||+||+|-+|..+++.+... |.+|++++++.++.+.+.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~ 56 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL 56 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence 3457999999999999999877777 579999998877665554
No 428
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.45 E-value=0.072 Score=40.61 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=28.6
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
++|+|++|++|..+++.....|++|++++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 58999999999999988888899999998875
No 429
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.44 E-value=0.052 Score=47.27 Aligned_cols=46 Identities=26% Similarity=0.341 Sum_probs=39.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g 129 (192)
.+++++|+| +|++|..++..+...|++|+++.|+.++.+.+.++++
T Consensus 378 ~~k~vlIlG-aGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIG-AGGAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 467899999 6999999999888899999999999888877764554
No 430
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.43 E-value=0.045 Score=41.97 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=30.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
++++|+|++|++|..+++.....|++|+.+++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 4799999999999999988777899999999874
No 431
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.40 E-value=0.17 Score=40.50 Aligned_cols=54 Identities=15% Similarity=0.033 Sum_probs=39.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYK 137 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~ 137 (192)
-.|++|+|.|++|-+|..+++++...|++|++..+..+.+.... -++|.+|+..
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~--~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELV--KQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--ccCCEEEEcc
Confidence 46999999994444999999999999998888887544433322 2578888754
No 432
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.037 Score=43.07 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=29.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG 116 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~ 116 (192)
.+++++|+||+|++|..+++.....|++|+.+++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~ 40 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY 40 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence 4689999999999999999888888998766654
No 433
>PLN00203 glutamyl-tRNA reductase
Probab=95.31 E-value=0.11 Score=45.04 Aligned_cols=45 Identities=29% Similarity=0.471 Sum_probs=39.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG 129 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g 129 (192)
+.+|+|+| +|.+|.++++.+...|+ +|+++.|+.++.+.+.++++
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~ 311 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP 311 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC
Confidence 68999999 79999999998888998 89999999999888775664
No 434
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.29 E-value=0.29 Score=37.95 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=63.0
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeeecCCcccHHHHHHhhc-
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDVALKRMF- 150 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~- 150 (192)
...+....++||-.| .+.|..++.+++..+ .+|+.++.+++..+.+++ +.|.+.-+..... +..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence 345566788999998 356776777777653 499999999998888874 3455433333333 4544444432
Q ss_pred ---cCCc-----cccc---HHHHHHHHHhhcCCCeEEE
Q 029543 151 ---LCWV-----DFVG---IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 151 ---~~g~-----d~~g---~~~~~~~~~~l~~~G~v~~ 177 (192)
.+.+ |+-- ...++.+++.+++||++++
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 1123 3321 3478889999999997654
No 435
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.27 E-value=0.052 Score=48.38 Aligned_cols=52 Identities=23% Similarity=0.278 Sum_probs=42.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH---------------------HHHHHHHhcCCCeeeec
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE---------------------KVDLLKNKFGFDDAFNY 136 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~---------------------~~~~~~~~~g~~~vi~~ 136 (192)
.+++|+|+| +|+.|+.++..++..|.+|++.++.+. +.++++ ++|++..++.
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~-~~Gv~~~~~~ 381 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFT-AMGIDFHLNC 381 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHH-HCCeEEEcCC
Confidence 489999999 899999999999999999999987752 456667 8888765554
No 436
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=95.26 E-value=0.021 Score=45.08 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=31.7
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD 122 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 122 (192)
|||+||+|.+|..+++.+...|.+|++++|++++.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 36 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA 36 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC
Confidence 689999999999999888888999999999876543
No 437
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=95.25 E-value=0.76 Score=37.16 Aligned_cols=107 Identities=12% Similarity=0.135 Sum_probs=68.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeeecCCcccHHH---HHHhhccC-C
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF----DDAFNYKEEPDLDV---ALKRMFLC-W 153 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~---~i~~~~~~-g 153 (192)
..++.|+|+|.-+|.|..++.-+-..|.+|++....++..+.++.+..- +..+|..+++.+.+ .+++..++ |
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 3567799999999999988888888999999999888887777633311 12456555423433 33333333 3
Q ss_pred c----ccc--------------------------cH-HHHHHHHHhhcCC-Ce-EEEeeCCCCCcccc
Q 029543 154 V----DFV--------------------------GI-EYCRSLLLVLLFR-PL-KIMENDSGSTPIPF 188 (192)
Q Consensus 154 ~----d~~--------------------------g~-~~~~~~~~~l~~~-G~-v~~G~~~~~~~~~~ 188 (192)
. ++. |. ......+..+|+. |+ |.++...|..+.|.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~ 174 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPA 174 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcc
Confidence 2 222 21 2334445566654 75 68888888776654
No 438
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.23 E-value=0.062 Score=41.50 Aligned_cols=38 Identities=26% Similarity=0.398 Sum_probs=31.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEK 120 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~ 120 (192)
.++.++|+||++++|..++.-....|++|+++.++.++
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~ 41 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEE 41 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 57899999999999998887777889998877777553
No 439
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.23 E-value=0.063 Score=38.35 Aligned_cols=41 Identities=24% Similarity=0.397 Sum_probs=34.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
|+|.| +|++|.+.+...+..|.+|..+++++ +.+.++ +.|.
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~-~~g~ 41 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIK-EQGL 41 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHH-HHCE
T ss_pred CEEEC-cCHHHHHHHHHHHHCCCceEEEEccc-cHHhhh-heeE
Confidence 68999 89999988877766899999999888 778777 6554
No 440
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.21 E-value=0.076 Score=40.40 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=33.7
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
|||+||+|-+|..++..+...|..|+...+++.......
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~ 39 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEE 39 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccc
Confidence 799999999999999999999999998888877655544
No 441
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.19 E-value=0.054 Score=48.37 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=31.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++|+|+| +|+.|+.++..++..|++|+++++.+
T Consensus 326 ~~~~VaIIG-aGpAGLsaA~~L~~~G~~V~V~E~~~ 360 (654)
T PRK12769 326 SDKRVAIIG-AGPAGLACADVLARNGVAVTVYDRHP 360 (654)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 588999999 89999999999999999999998753
No 442
>PLN03013 cysteine synthase
Probab=95.19 E-value=0.27 Score=41.66 Aligned_cols=58 Identities=26% Similarity=0.268 Sum_probs=46.0
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeee
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFN 135 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~ 135 (192)
+...+.+|.+.+|...+|..|..++..|+.+|.+++++.. +++|.+.++ .+|++.++.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ir-a~GAeVi~v 227 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLK-AFGAELVLT 227 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHH-HcCCEEEEE
Confidence 4456678866667777999999999999999997766643 467889998 999987654
No 443
>PLN02565 cysteine synthase
Probab=95.17 E-value=0.32 Score=39.63 Aligned_cols=57 Identities=26% Similarity=0.277 Sum_probs=44.9
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeee
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAF 134 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi 134 (192)
+...+.+|.+.+|...+|..|+.++..|+.+|.+++++.. ++.|++.++ .+|++.++
T Consensus 59 ~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~-~~GA~V~~ 118 (322)
T PLN02565 59 EKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILL-AFGAELVL 118 (322)
T ss_pred HcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHH-HcCCEEEE
Confidence 4445578877677777999999999999999997666554 468889998 99997654
No 444
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.15 E-value=0.24 Score=39.12 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=39.6
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
...++.++.+||=.| +| .|..+..+++..+++|++++.+++-.+.+++..
T Consensus 46 ~~l~l~~~~~VLDiG-cG-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~ 95 (263)
T PTZ00098 46 SDIELNENSKVLDIG-SG-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRN 95 (263)
T ss_pred HhCCCCCCCEEEEEc-CC-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHc
Confidence 556788999999998 44 466667777777889999999999888888433
No 445
>PLN02778 3,5-epimerase/4-reductase
Probab=95.13 E-value=0.097 Score=42.04 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=39.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHhcCCCeeeecC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVD----LLKNKFGFDDAFNYK 137 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~----~~~~~~g~~~vi~~~ 137 (192)
...+|||+||+|-+|..+++.+...|.+|+...+.....+ .++ ..+.|.||+..
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~-~~~~D~ViH~A 65 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADID-AVKPTHVFNAA 65 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHH-hcCCCEEEECC
Confidence 3468999999999999999998888998876543322222 233 55788888644
No 446
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.067 Score=46.38 Aligned_cols=46 Identities=20% Similarity=0.307 Sum_probs=35.9
Q ss_pred CCCCEEEEeCCCchHHHHHH-HHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 029543 82 KKGEYVYVSAASGAVGQLVG-QFAKLAGC-HVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~-q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~ 128 (192)
-.|++|||+||+|++|.-.+ |+++. +. +++..++++.++.....++
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~-~p~~i~l~~~~E~~~~~i~~el 295 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKF-NPKEIILFSRDEYKLYLIDMEL 295 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhc-CCCEEEEecCchHHHHHHHHHH
Confidence 36899999999999998555 67766 55 8999999988776655333
No 447
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.11 E-value=0.065 Score=41.30 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=29.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.+.+++|+||+|++|..+++-....|++|+.+.++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999999999998777889988776643
No 448
>PLN02572 UDP-sulfoquinovose synthase
Probab=95.08 E-value=0.043 Score=46.69 Aligned_cols=34 Identities=21% Similarity=0.141 Sum_probs=30.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG 116 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~ 116 (192)
.+++|||+||+|.||..+++.+...|++|+++++
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 5688999999999999999888888999999864
No 449
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.07 E-value=0.14 Score=34.79 Aligned_cols=46 Identities=24% Similarity=0.349 Sum_probs=38.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeee
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFN 135 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~ 135 (192)
|+|.| .|.+|..+++..+..+.+|++++.++++.+.++ +.|.. ++.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~ 46 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIY 46 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEE
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-ccc
Confidence 68899 899999999999886669999999999999998 77754 443
No 450
>PRK00811 spermidine synthase; Provisional
Probab=95.04 E-value=0.23 Score=39.72 Aligned_cols=92 Identities=11% Similarity=0.005 Sum_probs=55.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC-----C--CeeeecCCcccHHHHHHhhccCC
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG-----F--DDAFNYKEEPDLDVALKRMFLCW 153 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g-----~--~~vi~~~~~~~~~~~i~~~~~~g 153 (192)
...++||+.| + |.|..+..+++..+. +|++++.+++-.+.+++.+. . +.-+..... |..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG-~-G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIG-G-GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEe-c-CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 3467899999 3 447777778887666 89999999998888884332 1 111111122 34444433 2222
Q ss_pred c-----ccc---c-------HHHHHHHHHhhcCCCeEEE
Q 029543 154 V-----DFV---G-------IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 154 ~-----d~~---g-------~~~~~~~~~~l~~~G~v~~ 177 (192)
+ |.. + .+.++.+.+.|+++|++++
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~ 189 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVA 189 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 2 432 2 2246778899999996543
No 451
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=95.01 E-value=0.17 Score=43.03 Aligned_cols=34 Identities=32% Similarity=0.314 Sum_probs=30.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEE-EEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVV-GSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi-~~~~~ 117 (192)
.|.+|+|.| .|.+|..+++.+...|++|+ +.|.+
T Consensus 236 ~Gk~VaVqG-~GnVg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 236 EGKTVVVSG-SGNVAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 689999999 99999999999999999998 44444
No 452
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=94.98 E-value=0.34 Score=40.10 Aligned_cols=56 Identities=25% Similarity=0.408 Sum_probs=38.1
Q ss_pred HHhCCCCCCEEE-EeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe
Q 029543 77 EICSPKKGEYVY-VSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKN---KFGFDD 132 (192)
Q Consensus 77 ~~~~~~~g~~Vl-V~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~ 132 (192)
.....++|++|+ ...|.||==..++|+....|..|++.+.+++|+..+++ ++|...
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~n 209 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGVRN 209 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHHHHHcCCCc
Confidence 345788998887 44444444444444444446678999999999988863 578874
No 453
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.94 E-value=0.1 Score=40.88 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=58.5
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeeecCCcccHH-HHHHhhc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--HVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLD-VALKRMF 150 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~-~~i~~~~ 150 (192)
...++.||++|+=.| + |.|.+...++++.|- +|+..+.++++.+.++++ +|.+..+..... |+. +...+..
T Consensus 34 ~~l~i~pG~~VlEaG-t-GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~ 110 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAG-T-GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL 110 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred HHcCCCCCCEEEEec-C-CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence 457899999999988 4 458888889988763 999999999999888753 466532222111 222 1111111
Q ss_pred cCCc-----cccc-HHHHHHHHHhh-cCCCeEE
Q 029543 151 LCWV-----DFVG-IEYCRSLLLVL-LFRPLKI 176 (192)
Q Consensus 151 ~~g~-----d~~g-~~~~~~~~~~l-~~~G~v~ 176 (192)
...+ |.-. ...+..+.+.| +++|++.
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~ 143 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRIC 143 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEE
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEE
Confidence 1122 4444 45888999999 7888653
No 454
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.91 E-value=0.7 Score=35.93 Aligned_cols=91 Identities=16% Similarity=0.090 Sum_probs=54.8
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCcccc-
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWVDFV- 157 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~d~~- 157 (192)
....++++||-.| +|+ |..+..+++ .|.+|+++|.+++.++.+++.......+..+-+ ++ ....+.+|.+
T Consensus 38 l~~~~~~~vLDiG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~~-----~~~~~~fD~V~ 108 (251)
T PRK10258 38 LPQRKFTHVLDAG-CGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-SL-----PLATATFDLAW 108 (251)
T ss_pred cCccCCCeEEEee-CCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-cC-----cCCCCcEEEEE
Confidence 3444678899999 565 766666654 578999999999999988833322222221111 10 0111112221
Q ss_pred ---------c-HHHHHHHHHhhcCCCeEEEe
Q 029543 158 ---------G-IEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 158 ---------g-~~~~~~~~~~l~~~G~v~~G 178 (192)
. ...+..+.+.|+|+|.+++.
T Consensus 109 s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~ 139 (251)
T PRK10258 109 SNLAVQWCGNLSTALRELYRVVRPGGVVAFT 139 (251)
T ss_pred ECchhhhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 1 24788889999999966544
No 455
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.89 E-value=0.28 Score=34.47 Aligned_cols=51 Identities=14% Similarity=0.136 Sum_probs=36.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcC--CEEEEEeC--CHHHHHHHHHhcCCCeeeecC
Q 029543 87 VYVSAASGAVGQLVGQFAKLAG--CHVVGSAG--SKEKVDLLKNKFGFDDAFNYK 137 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~--~~~~~~~~~~~~g~~~vi~~~ 137 (192)
|.|.|++|.||..++.+.+... ++|++.+- +-+++....++|.+..++-.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~ 55 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIAD 55 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESS
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcC
Confidence 6799999999999999999886 57776663 334433333378888776544
No 456
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=94.88 E-value=0.16 Score=43.66 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=37.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF 128 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 128 (192)
.+.+++|+| +|++|..++......|++|++.+|++++.+.+.+++
T Consensus 331 ~~k~vlIiG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 331 NNQHVAIVG-AGGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999999 799999999888889999999999988877665343
No 457
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.88 E-value=0.18 Score=39.22 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=28.8
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEe
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSA 115 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~ 115 (192)
.|++++|+||+ +++|..+++.+...|++|+++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 58899999987 4899999988888999988875
No 458
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.87 E-value=0.12 Score=45.35 Aligned_cols=48 Identities=27% Similarity=0.370 Sum_probs=43.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeee
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDAF 134 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~vi 134 (192)
++++|.| .|.+|+.+++..+..|.++++++.++++.+.++ +.|...+.
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~-~~g~~~i~ 465 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELR-ERGIRAVL 465 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HCCCeEEE
Confidence 7899999 999999999999999999999999999999998 77765544
No 459
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=94.86 E-value=0.099 Score=41.90 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=27.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
+|||+||+|-+|..+++.+...| +|+++++.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence 69999999999999998887778 78888764
No 460
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.83 E-value=0.54 Score=36.77 Aligned_cols=90 Identities=18% Similarity=0.083 Sum_probs=58.3
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCcc
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWVD 155 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~d 155 (192)
......++++||=.| +|. |.++..+++.. +.+|++++.++.-++.++ +.+.+.+. . +..+ +. ..+.+|
T Consensus 23 ~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~~~-~----d~~~-~~--~~~~fD 91 (255)
T PRK14103 23 ARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDART-G----DVRD-WK--PKPDTD 91 (255)
T ss_pred HhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcEEE-c----Chhh-CC--CCCCce
Confidence 444567889999998 444 77888888775 679999999999888888 65544321 1 2221 10 011222
Q ss_pred ---------ccc--HHHHHHHHHhhcCCCeEEE
Q 029543 156 ---------FVG--IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 156 ---------~~g--~~~~~~~~~~l~~~G~v~~ 177 (192)
.+. ...+..+.+.|+|+|++++
T Consensus 92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~ 124 (255)
T PRK14103 92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAV 124 (255)
T ss_pred EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEE
Confidence 122 2377888999999996543
No 461
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.81 E-value=0.061 Score=44.58 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=33.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
..+.+|+|+||+|-||..++..+...|.+|++++|..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 3578999999999999999999988999999999754
No 462
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.81 E-value=0.09 Score=40.83 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=30.0
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.+++++|+||+ |++|..++......|++|++++|+
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 46889999988 489999887777789999999887
No 463
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.80 E-value=0.36 Score=37.76 Aligned_cols=90 Identities=21% Similarity=0.160 Sum_probs=53.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeeecCCcccHHHHHHhhccCCcc---
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDVALKRMFLCWVD--- 155 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~g~d--- 155 (192)
..+.+||=.| +|.|..+..+++. |.+|++++.+++.++.+++. .|...-+..... +..+ +.....+.+|
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence 4567888887 4567788888875 88999999999988888733 232211111111 2222 1111111222
Q ss_pred ------ccc--HHHHHHHHHhhcCCCeEE
Q 029543 156 ------FVG--IEYCRSLLLVLLFRPLKI 176 (192)
Q Consensus 156 ------~~g--~~~~~~~~~~l~~~G~v~ 176 (192)
.+. ...+..+.+.|+|+|+++
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~ 146 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALS 146 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEE
Confidence 122 236888999999999653
No 464
>PLN02240 UDP-glucose 4-epimerase
Probab=94.80 E-value=0.066 Score=43.61 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=30.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.+++|+|+||+|.+|..+++.+...|.+|+++++.
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789999999999999998888889999999864
No 465
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.80 E-value=1.4 Score=34.81 Aligned_cols=52 Identities=23% Similarity=0.230 Sum_probs=35.6
Q ss_pred hCCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCe
Q 029543 79 CSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKN---KFGFDD 132 (192)
Q Consensus 79 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~~g~~~ 132 (192)
..+++|++||=.| +| .|..++.+++..+ ..|++++.++++++.+++ ++|.+.
T Consensus 67 l~~~~g~~VLDl~-ag-~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~ 123 (264)
T TIGR00446 67 LEPDPPERVLDMA-AA-PGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLN 123 (264)
T ss_pred hCCCCcCEEEEEC-CC-chHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCc
Confidence 4678899888776 33 3444555555543 389999999999988864 346544
No 466
>PRK01581 speE spermidine synthase; Validated
Probab=94.77 E-value=0.59 Score=38.77 Aligned_cols=92 Identities=17% Similarity=0.100 Sum_probs=55.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC---------C-CeeeecCCcccHHHHHHhhc
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFG---------F-DDAFNYKEEPDLDVALKRMF 150 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g---------~-~~vi~~~~~~~~~~~i~~~~ 150 (192)
...++|||.| ||.|..+..+++..+. +|++++.+++-.+.++ ++. . +.-+...-. |..+.+....
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~~~ 224 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSSPS 224 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHhcC
Confidence 3456999999 4466677777776655 9999999999899888 521 1 111111112 4444444322
Q ss_pred cC-Cc---cc---cc--------HHHHHHHHHhhcCCCeEEE
Q 029543 151 LC-WV---DF---VG--------IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 151 ~~-g~---d~---~g--------~~~~~~~~~~l~~~G~v~~ 177 (192)
.. .+ |. .+ .+.++.+.+.|+|+|++++
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~ 266 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVC 266 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 11 22 42 22 2366788899999996544
No 467
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.76 E-value=0.33 Score=38.90 Aligned_cols=68 Identities=18% Similarity=0.083 Sum_probs=47.7
Q ss_pred chhHHHHHHHHHHHhCC-CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHhcCCCeeeec
Q 029543 65 IMPSVTAFAGLYEICSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDL-LKNKFGFDDAFNY 136 (192)
Q Consensus 65 ~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~~g~~~vi~~ 136 (192)
||.....+..+ +..++ -.|++|+|.|.+.-+|.-+++++...|++|+.+.+....++. ++ .+|.+|..
T Consensus 139 PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~---~ADIVIsA 208 (286)
T PRK14175 139 PCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLK---DADVIVSA 208 (286)
T ss_pred CCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHh---hCCEEEEC
Confidence 55555555555 33333 369999999966669999999999999999998876554433 33 47776653
No 468
>PLN02206 UDP-glucuronate decarboxylase
Probab=94.74 E-value=0.067 Score=45.52 Aligned_cols=35 Identities=26% Similarity=0.208 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.+.+|||+||+|-||..+++.+...|.+|+++++.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 45889999999999999999888889999998754
No 469
>PLN02366 spermidine synthase
Probab=94.71 E-value=0.41 Score=38.81 Aligned_cols=92 Identities=20% Similarity=0.088 Sum_probs=55.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC------CeeeecCCcccHHHHHHhhccCCc
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGF------DDAFNYKEEPDLDVALKRMFLCWV 154 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~g~ 154 (192)
...++||+.| +|. |.++..+++..+. +|.+++.+++-.+.+++.+.. +.-+..... |..+.+++...+.+
T Consensus 90 ~~pkrVLiIG-gG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVG-GGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEc-CCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence 4578999999 444 6677788887766 899999998888888733321 111111112 33334443312212
Q ss_pred -----ccc---c-------HHHHHHHHHhhcCCCeEE
Q 029543 155 -----DFV---G-------IEYCRSLLLVLLFRPLKI 176 (192)
Q Consensus 155 -----d~~---g-------~~~~~~~~~~l~~~G~v~ 176 (192)
|+. + .+.++.+.++|+|+|+++
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv 203 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVC 203 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEE
Confidence 432 1 135778889999999653
No 470
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.71 E-value=0.18 Score=42.13 Aligned_cols=34 Identities=24% Similarity=0.150 Sum_probs=28.0
Q ss_pred CCCCEEEEeCCCchHHHH--HHHHHHHcCCEEEEEeC
Q 029543 82 KKGEYVYVSAASGAVGQL--VGQFAKLAGCHVVGSAG 116 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~--~~q~a~~~Ga~Vi~~~~ 116 (192)
.-++++||+|+++++|+. +++.+ ..|++++++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~ 74 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFF 74 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEec
Confidence 346899999999999998 56666 78999888874
No 471
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=94.67 E-value=0.089 Score=42.03 Aligned_cols=51 Identities=29% Similarity=0.422 Sum_probs=37.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH------HHH-HHHHHhcCCCeeeecC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK------EKV-DLLKNKFGFDDAFNYK 137 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~------~~~-~~~~~~~g~~~vi~~~ 137 (192)
+|||+|++|.+|..+.+.++..|.+|+.+.+++ +.. +.++ +...|.||+..
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~-~~~pd~Vin~a 59 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLE-AFKPDVVINCA 59 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHH-HH--SEEEE--
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHH-HhCCCeEeccc
Confidence 699999999999999999998898999996553 232 3333 66788888864
No 472
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.66 E-value=0.2 Score=41.75 Aligned_cols=40 Identities=28% Similarity=0.389 Sum_probs=31.8
Q ss_pred EEEeCCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHh
Q 029543 87 VYVSAASGAVGQLVGQFAKLAG-C-HVVGSAGSKEKVDLLKNK 127 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~G-a-~Vi~~~~~~~~~~~~~~~ 127 (192)
|+|+|+ |.+|..+++.+...+ . +|++.+|+.++.+.+.++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~ 42 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEK 42 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhh
Confidence 789997 999999998877665 5 899999999998887633
No 473
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=94.65 E-value=0.092 Score=42.87 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=32.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKVDLL 124 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~ 124 (192)
.+|||+||+|-+|..+++.+... |.+|++++++.++...+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~ 42 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL 42 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh
Confidence 36999999999999999887765 68999999877654443
No 474
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=94.64 E-value=0.065 Score=43.52 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=29.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKE 119 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~ 119 (192)
+|+|+||+|.+|..+++.....| ++|++++|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 48999999999999998777777 78999998765
No 475
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=94.63 E-value=0.72 Score=35.37 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=57.4
Q ss_pred HhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeeecCCcccHHHHHHhhccCCc
Q 029543 78 ICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDVALKRMFLCWV 154 (192)
Q Consensus 78 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~g~ 154 (192)
.....++.+||-.| +|. |.....+++ .+++++.++.+++..+.+++.+ +.. ++.... ++.+.... ..+.+
T Consensus 43 ~~~~~~~~~vLdiG-~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~--~~~~~~-~~~~~~~~-~~~~f 115 (233)
T PRK05134 43 HAGGLFGKRVLDVG-CGG-GILSESMAR-LGADVTGIDASEENIEVARLHALESGLK--IDYRQT-TAEELAAE-HPGQF 115 (233)
T ss_pred hccCCCCCeEEEeC-CCC-CHHHHHHHH-cCCeEEEEcCCHHHHHHHHHHHHHcCCc--eEEEec-CHHHhhhh-cCCCc
Confidence 33455788999999 554 777777777 4789999999988887776322 221 222222 33322211 11222
Q ss_pred c---------ccc--HHHHHHHHHhhcCCCeEEEee
Q 029543 155 D---------FVG--IEYCRSLLLVLLFRPLKIMEN 179 (192)
Q Consensus 155 d---------~~g--~~~~~~~~~~l~~~G~v~~G~ 179 (192)
| ... ...+..+.+.|+++|++++..
T Consensus 116 D~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 116 DVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred cEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence 3 222 236788889999999765544
No 476
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.47 E-value=0.29 Score=37.11 Aligned_cols=95 Identities=19% Similarity=0.124 Sum_probs=55.3
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeeecCCcccHHHHHHhhccCC
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDVALKRMFLCW 153 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~g 153 (192)
...+++++++||-.| +|. |..+..+++.. .+|+.++.+++..+.+++. ++.+. ++.... +..+.... .+.
T Consensus 72 ~~l~~~~~~~VLeiG-~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~~--~~~ 144 (212)
T PRK00312 72 ELLELKPGDRVLEIG-TGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWPA--YAP 144 (212)
T ss_pred HhcCCCCCCEEEEEC-CCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCCc--CCC
Confidence 456788999999998 443 55556666653 4899999998887777643 34432 111111 11111110 012
Q ss_pred c-----ccccHHHHHHHHHhhcCCCeEEEe
Q 029543 154 V-----DFVGIEYCRSLLLVLLFRPLKIME 178 (192)
Q Consensus 154 ~-----d~~g~~~~~~~~~~l~~~G~v~~G 178 (192)
+ +..-........+.|+++|++++.
T Consensus 145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 145 FDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 2 332234556778999999965443
No 477
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=94.46 E-value=0.49 Score=34.62 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeeecCCcccHHHHHHhhccCCc-----cc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE-KVDLLKNKFGFDDAFNYKEEPDLDVALKRMFLCWV-----DF 156 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~g~-----d~ 156 (192)
.+++|.|+| -|.-|...++-.|-.|.+|++..+..+ ..+.++ +-|... . ++.+.+++. +-+ |.
T Consensus 3 ~~k~IAViG-yGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~-~~Gf~v-~------~~~eAv~~a--DvV~~L~PD~ 71 (165)
T PF07991_consen 3 KGKTIAVIG-YGSQGHAHALNLRDSGVNVIVGLREGSASWEKAK-ADGFEV-M------SVAEAVKKA--DVVMLLLPDE 71 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHH-HTT-EC-C------EHHHHHHC---SEEEE-S-HH
T ss_pred CCCEEEEEC-CChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHH-HCCCee-c------cHHHHHhhC--CEEEEeCChH
Confidence 578999999 899999999999999999998888876 677777 777742 1 344444432 101 44
Q ss_pred ccHHHH-HHHHHhhcCCCeEEE
Q 029543 157 VGIEYC-RSLLLVLLFRPLKIM 177 (192)
Q Consensus 157 ~g~~~~-~~~~~~l~~~G~v~~ 177 (192)
+-.+.+ +.....|+++-.+.+
T Consensus 72 ~q~~vy~~~I~p~l~~G~~L~f 93 (165)
T PF07991_consen 72 VQPEVYEEEIAPNLKPGATLVF 93 (165)
T ss_dssp HHHHHHHHHHHHHS-TT-EEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEe
Confidence 444444 444457777765544
No 478
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=94.44 E-value=0.084 Score=47.22 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=33.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLA-GCHVVGSAGSKEKV 121 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~ 121 (192)
.++.+|||+||+|-+|..+++.+... |.+|+++++.+.+.
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~ 353 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI 353 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh
Confidence 46788999999999999999877764 68999999876543
No 479
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=94.42 E-value=0.85 Score=36.57 Aligned_cols=57 Identities=19% Similarity=0.252 Sum_probs=43.7
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeee
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFN 135 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~ 135 (192)
+...+.+|++|+... +|..|..++..|+.+|.+++++.. ++.|++.++ .+|++.++.
T Consensus 52 ~~g~~~~g~~vv~aS-sGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v 111 (290)
T TIGR01138 52 KRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMR-AYGAELILV 111 (290)
T ss_pred HcCCCCCCCEEEEEC-CChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHH-HcCCEEEEe
Confidence 344556777776655 999999999999999997666554 357888888 999986543
No 480
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=94.39 E-value=0.079 Score=44.37 Aligned_cols=44 Identities=27% Similarity=0.279 Sum_probs=38.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 82 KKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 82 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
..-++|+|.||+|.+|+..++.++.+|..|.+.+|+.++.+.+.
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~ 120 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLL 120 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhh
Confidence 34578999999999999999999999999999999988766654
No 481
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.38 E-value=0.18 Score=43.20 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.+++|+|+| .|++|+.++.+++..|.+|+++++++
T Consensus 15 ~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~ 49 (480)
T PRK01438 15 QGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGD 49 (480)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 478999999 89999999999999999999998664
No 482
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=94.38 E-value=0.066 Score=42.43 Aligned_cols=51 Identities=16% Similarity=0.278 Sum_probs=40.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------H--hcCCCeeeecC
Q 029543 87 VYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK-----------N--KFGFDDAFNYK 137 (192)
Q Consensus 87 VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-----------~--~~g~~~vi~~~ 137 (192)
|+|+|++|-||..+++..+..|-.|++++|++.+.+... + .+++|.+||..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECC
Confidence 689999999999999999999999999999986544332 0 23578888854
No 483
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=94.35 E-value=0.099 Score=44.43 Aligned_cols=35 Identities=20% Similarity=0.093 Sum_probs=31.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
+..+|+|+||+|-||..+++.+...|.+|+++++.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999999888889999999864
No 484
>PRK11761 cysM cysteine synthase B; Provisional
Probab=94.34 E-value=0.84 Score=36.73 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=44.6
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeeec
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFNY 136 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~~ 136 (192)
+...+.+|++|+... +|..|+.++..|+.+|.+++++.. ++.|.+.++ .+|++.++..
T Consensus 56 ~~g~~~~g~~vv~aS-sGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~~~ 116 (296)
T PRK11761 56 KRGEIKPGDTLIEAT-SGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMR-AYGAELILVP 116 (296)
T ss_pred HcCCCCCCCEEEEeC-CChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHH-HcCCEEEEeC
Confidence 344456778876655 999999999999999997655553 357888888 9999876544
No 485
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=94.31 E-value=0.16 Score=38.65 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=30.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSK 118 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 118 (192)
.|.+|+|.| .|.+|..-++.....|++|++++...
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 478999999 89999999999989999999888654
No 486
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.28 E-value=0.028 Score=45.89 Aligned_cols=79 Identities=18% Similarity=0.018 Sum_probs=53.3
Q ss_pred hccccccCCCCCCCeEEEEEEEeeeChhhhhhhcccCCCcccccCCCCCchhHHHHHHHHHHHhCCCCCCEEEE-eCCCc
Q 029543 16 QNILKQNAAEGSKDTVLLKNLYLSCDPYMQKRMSKLDTSLFYSFCPGGVIMPSVTAFAGLYEICSPKKGEYVYV-SAASG 94 (192)
Q Consensus 16 ~~~~g~~~~g~~~~~vlv~~~~~~v~p~~~~~~~~~~~~~~~~~~~g~~~~~~~ta~~~l~~~~~~~~g~~VlV-~Ga~G 94 (192)
.++..++.|.+.+++|+|+++++++...|.....+.+.....|+.+|.+......+...- ..+++.||+|.| += ..
T Consensus 16 l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~--V~~~k~GDrVgV~~~-~~ 92 (339)
T COG1064 16 LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEG--VTGLKVGDRVGVGWL-VI 92 (339)
T ss_pred ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCC--CccCCCCCEEEecCc-cC
Confidence 556778888999999999999999998877666665555557788887732222221111 125788999998 43 34
Q ss_pred hHH
Q 029543 95 AVG 97 (192)
Q Consensus 95 ~iG 97 (192)
+.|
T Consensus 93 ~Cg 95 (339)
T COG1064 93 SCG 95 (339)
T ss_pred CCC
Confidence 444
No 487
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.24 E-value=0.17 Score=40.43 Aligned_cols=43 Identities=28% Similarity=0.371 Sum_probs=36.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
+|.|+| +|.+|.+.+......|.+|+.+++++++.+.++ +.|.
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~-~~g~ 44 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDALN-ENGL 44 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHHH-HcCC
Confidence 589999 899999888777777899999999888888887 5554
No 488
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=94.24 E-value=0.19 Score=38.71 Aligned_cols=41 Identities=20% Similarity=0.420 Sum_probs=32.8
Q ss_pred CCC--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHhcCCC
Q 029543 91 AAS--GAVGQLVGQFAKLAGCHVVGSAGSKEK----VDLLKNKFGFD 131 (192)
Q Consensus 91 Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~~~~----~~~~~~~~g~~ 131 (192)
|++ ++||..+++-....|++|++++++.++ ++.+.++.+.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~ 47 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE 47 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc
Confidence 456 999999999999999999999999987 44444356654
No 489
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=94.23 E-value=1.8 Score=37.24 Aligned_cols=99 Identities=18% Similarity=0.136 Sum_probs=58.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeeec-CCcccHHHHHHhhccCC
Q 029543 80 SPKKGEYVYVSAASGAVGQLVGQFAKLAG--CHVVGSAGSKEKVDLLKN---KFGFDDAFNY-KEEPDLDVALKRMFLCW 153 (192)
Q Consensus 80 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~~g~~~vi~~-~~~~~~~~~i~~~~~~g 153 (192)
.+++|++||=.. +++=|. .+++|..++ ..|++.+.+++|+..+++ ++|...+.-. .+...+.+...... +.
T Consensus 110 ~~~pg~~VLD~C-AAPGgK-Tt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~~~~~~f-D~ 186 (470)
T PRK11933 110 DDNAPQRVLDMA-AAPGSK-TTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGAALPETF-DA 186 (470)
T ss_pred CCCCCCEEEEeC-CCccHH-HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhhhchhhc-Ce
Confidence 678999888665 444443 455555553 289999999999888763 5787753222 22102221111111 11
Q ss_pred c--c--ccc--------------------------HHHHHHHHHhhcCCCeEEEeeCC
Q 029543 154 V--D--FVG--------------------------IEYCRSLLLVLLFRPLKIMENDS 181 (192)
Q Consensus 154 ~--d--~~g--------------------------~~~~~~~~~~l~~~G~v~~G~~~ 181 (192)
+ | |+| .+.+..++++|+|||++++...+
T Consensus 187 ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYSTCT 244 (470)
T PRK11933 187 ILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYSTCT 244 (470)
T ss_pred EEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECCC
Confidence 1 2 332 23567889999999988777654
No 490
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=94.20 E-value=0.6 Score=38.83 Aligned_cols=58 Identities=17% Similarity=0.259 Sum_probs=46.3
Q ss_pred HHhCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeee
Q 029543 77 EICSPKKGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFN 135 (192)
Q Consensus 77 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~ 135 (192)
+...+.+|.+.+|...+|..|+.++..|+.+|.+++++.. +.+|.+.++ .+|++.++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr-~~GA~Vi~~ 163 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMR-AFGAELVLT 163 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHH-HcCCEEEEE
Confidence 4445778877777788999999999999999997666644 367888898 999987654
No 491
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=94.19 E-value=0.072 Score=38.19 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=28.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKE 119 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~ 119 (192)
+++|+||+|++|..+++.....|+ .|+.+.|+++
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 689999999999999988877887 7888887754
No 492
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=94.19 E-value=0.79 Score=39.09 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=34.9
Q ss_pred HhCCCCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCe
Q 029543 78 ICSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCHVVGSAGSKEKVDLLKN---KFGFDD 132 (192)
Q Consensus 78 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~ 132 (192)
...+.+|++||=.| +|+ |..+..+++.. +.+|++++.++++++.+++ ++|.+.
T Consensus 245 ~l~~~~g~~VLDlg-aG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~ 302 (445)
T PRK14904 245 LLNPQPGSTVLDLC-AAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITI 302 (445)
T ss_pred hcCCCCCCEEEEEC-CCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCe
Confidence 44677899998777 333 33334444433 3499999999999888763 356543
No 493
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.18 E-value=0.2 Score=44.50 Aligned_cols=48 Identities=23% Similarity=0.407 Sum_probs=43.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee
Q 029543 84 GEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGFDDA 133 (192)
Q Consensus 84 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~v 133 (192)
.++|+|.| .|.+|+..++..+..|.++++++.++++.+.++ +.|...+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-~~g~~v~ 447 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLR-KFGMKVF 447 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-hcCCeEE
Confidence 36899999 999999999999999999999999999999998 7886543
No 494
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.16 E-value=0.18 Score=40.35 Aligned_cols=40 Identities=25% Similarity=0.185 Sum_probs=34.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLK 125 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 125 (192)
.+|.|+| +|.+|...++.+...|.+|+..++++++++.++
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILKNAM 43 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 5799999 899999998888888999999999998877543
No 495
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.16 E-value=0.67 Score=36.73 Aligned_cols=92 Identities=17% Similarity=0.077 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC------CeeeecCCcccHHHHHHhhccC-Cc
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGC-HVVGSAGSKEKVDLLKNKFGF------DDAFNYKEEPDLDVALKRMFLC-WV 154 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~-g~ 154 (192)
..++||+.| +|. |..+..+++.... ++++++.+++-.+.+++.+.. +.-++.... |..+.+++.... .+
T Consensus 72 ~p~~VL~iG-~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~~~~~yDv 148 (270)
T TIGR00417 72 NPKHVLVIG-GGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLADTENTFDV 148 (270)
T ss_pred CCCEEEEEc-CCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHhCCCCccE
Confidence 456999999 444 5556666776645 899999998877877732211 111111112 333333322111 11
Q ss_pred ---ccc---c-------HHHHHHHHHhhcCCCeEEE
Q 029543 155 ---DFV---G-------IEYCRSLLLVLLFRPLKIM 177 (192)
Q Consensus 155 ---d~~---g-------~~~~~~~~~~l~~~G~v~~ 177 (192)
|.. + .+.++.+.+.|+++|++++
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~ 184 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVA 184 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEE
Confidence 322 2 2356788899999996544
No 496
>PLN02928 oxidoreductase family protein
Probab=94.13 E-value=0.1 Score=43.01 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=32.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.|+++.|+| .|.||+.+++.++.+|++|++.+++
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~ 191 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRS 191 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence 578999999 9999999999999999999999986
No 497
>PLN02970 serine racemase
Probab=94.08 E-value=1.7 Score=35.53 Aligned_cols=51 Identities=22% Similarity=0.115 Sum_probs=39.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeeecC
Q 029543 85 EYVYVSAASGAVGQLVGQFAKLAGCHVVGSAG---SKEKVDLLKNKFGFDDAFNYK 137 (192)
Q Consensus 85 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~vi~~~ 137 (192)
+.|+... +|..|..++..|+.+|.+++++.. +++|.+.++ .+|++.+....
T Consensus 76 ~~vv~aS-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~~~-~~GA~Vi~~~~ 129 (328)
T PLN02970 76 KGVVTHS-SGNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVI-RYGGIITWCEP 129 (328)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHH-hcCCEEEEeCC
Confidence 4555554 999999999999999997666654 467788888 99998665443
No 498
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.07 E-value=0.18 Score=43.26 Aligned_cols=47 Identities=21% Similarity=0.292 Sum_probs=37.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 029543 83 KGEYVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKEKVDLLKNKFGF 130 (192)
Q Consensus 83 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 130 (192)
.+++|+|.| .|+.|+.++++++..|+.|++.+++..+...+.+++|.
T Consensus 14 ~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi 60 (473)
T PRK00141 14 LSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGV 60 (473)
T ss_pred cCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCc
Confidence 567899999 99999999999999999999999876554433224443
No 499
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.06 E-value=0.15 Score=41.09 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=30.6
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 029543 83 KGEYVYVSAAS--GAVGQLVGQFAKLAGCHVVGSAGS 117 (192)
Q Consensus 83 ~g~~VlV~Ga~--G~iG~~~~q~a~~~Ga~Vi~~~~~ 117 (192)
.|++++|+||+ .|||...++.+...|++|++.++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 58999999975 899999999999999999987643
No 500
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.06 E-value=0.15 Score=32.28 Aligned_cols=33 Identities=21% Similarity=0.122 Sum_probs=29.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 029543 86 YVYVSAASGAVGQLVGQFAKLAGCHVVGSAGSKE 119 (192)
Q Consensus 86 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~ 119 (192)
+|+|.| +|.+|.-++...+.+|.+|..+.+++.
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence 589999 899999999999999999999998754
Done!