BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029544
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 34/166 (20%)
Query: 4 SGMNLITTVIGFGMSAAFIV-------------FICTRIICRRIRGVES----------- 39
+G + T +GFG S A + +IC R RR VES
Sbjct: 24 AGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILP 83
Query: 40 RPMFEIESGIDLEQPAPGHRINGLEPVLVAAIPTMKFNQEAFKSVED-------AECSIC 92
R +F E D E G + GL+ ++ + P F+++ + D CSIC
Sbjct: 84 RIIFVAEE--DNEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSIC 141
Query: 93 LGEYQDKEVLRIMPQCGHSFHLACIDIWLRKKTTCPVCR-LPLQDP 137
L EY++ E+LR+MP+C H FHL C+D WL+ +CPVCR PL P
Sbjct: 142 LCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTP 187
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL + +P + + +E+F V+D++CS+CLG+YQ +E L+ MP CGH+FH+ CID+WL
Sbjct: 86 GLSKDIREMLPVVIY-KESFI-VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 143
Query: 122 RKKTTCPVCRLPL--QDPLGRKHAREATFSMAQAVDSPETSINHSRQWLLTHLGHPE 176
TTCP+CRL L + L H S + + E S Q + H +
Sbjct: 144 TSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAISHTD 200
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL + +P + + +E+F +V D +CS+CLG+YQ +E L+ MP CGH+FH+ CID+WL
Sbjct: 72 GLSKDIREMLPIVIY-KESF-TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 129
Query: 122 RKKTTCPVCRLPL 134
TTCP+CRL L
Sbjct: 130 TSHTTCPLCRLSL 142
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 33/154 (21%)
Query: 58 HRIN-GLEPVLVAAIPTMKFNQ------EAFKSVEDAECSICLGEYQDKEVLRIMPQCGH 110
H +N GL+ + AIP KF + E +S ECS+CL E+Q+ E LRI+P C H
Sbjct: 96 HEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 111 SFHLACIDIWLRKKTTCPVCRLPLQDPLGRKHAREATFSMA--QAVDSPETSINHSR--- 165
FH+ CIDIWL+ CP+CR + + EA+F++ A SP + HSR
Sbjct: 156 VFHIDCIDIWLQGNANCPLCRTSV--------SCEASFTLDLISAPSSPRENSPHSRNRN 207
Query: 166 -----------QWLLTHLGHPEVNGNNQGHLHSV 188
+++ LG NGNN+ + ++
Sbjct: 208 LEPGLVLGGDDDFVVIELGAS--NGNNRESVRNI 239
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 8 LITTVIGFGMSAAFIVFICTRIICRRIRGVESRPMFEIESGIDLEQPAPGHRINGLEPVL 67
L+ T+I F + + +C R R+ ES F + D+E + GL+ +
Sbjct: 16 LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPF---TDSDVESRTSITAVRGLDEAI 72
Query: 68 VAAIPTMKFNQ--EAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWLRKKT 125
+ + PT +++ E + EC++C+ E++D E LR+MP+C H FH C+ +WL +
Sbjct: 73 INSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHS 132
Query: 126 TCPVCRLPL 134
TCP+CR+ L
Sbjct: 133 TCPLCRVDL 141
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 5 GMNLITTVIGFGMSAAFIVFI---CTRIICRRIRGVESRPMFEIESGIDLEQP-APGHRI 60
+ ++T V+ + F++ + C I R G R + GI + A R
Sbjct: 36 SLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRF 95
Query: 61 NGLEPVLVAAIPTMKFNQEAFK-SVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
+GL+ + ++P +F+ A K S + +CS+CL +++ E+LR++P+C H+FH+ CID
Sbjct: 96 SGLDKTAIESLPLFRFS--ALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQ 153
Query: 120 WLRKKTTCPVCR 131
WL + TCP+CR
Sbjct: 154 WLEQHATCPLCR 165
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 53 QPAPGHRINGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSF 112
QP GL+ ++ ++P + F+ E+ +S + AEC+ICL E+ + LR++PQCGH F
Sbjct: 75 QPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGF 134
Query: 113 HLACIDIWLRKKTTCPVCR 131
H+ACID WL ++CP CR
Sbjct: 135 HVACIDTWLGSHSSCPSCR 153
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 59 RINGLEPVLVAAIPTMKFNQEAFKSVEDA-ECSICLGEYQDKEVLRIMPQCGHSFHLACI 117
R +GL+ + ++P +F+ A K ++ ECS+CL +++D E+LR++P+C H+FH+ CI
Sbjct: 95 RFSGLDKKAIESLPFFRFS--ALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCI 152
Query: 118 DIWLRKKTTCPVC--RLPLQDPLG 139
D WL + TCP+C R+ ++D L
Sbjct: 153 DQWLEQHATCPLCRNRVNIEDDLS 176
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 10 TTVIGFGMSAAFIVFICTRIICRRIRGVESRPMFEIESGIDLEQPAPGHRIN-------G 62
T +I + + F C + RR + G+D PG+ +N G
Sbjct: 39 TAIIMIVLVSVFFALGCISVYMRRC--------LQHALGMD-SGGGPGNWLNVRQTTEPG 89
Query: 63 LEPVLVAAIPTMKFNQEAFKSV--EDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIW 120
L+ ++ PT ++ + E EC +CL E++D E LR++PQC H FH CID W
Sbjct: 90 LDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAW 149
Query: 121 LRKKTTCPVCRLPLQDPLGRKHARE-ATFSMAQAVDSPETSINHSRQWLLT 170
LR +TTCP+CR L G + E + +S T I+ +R+ +LT
Sbjct: 150 LRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLRTPIDDNRKRVLT 200
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 55 APGHRINGLEPVLVAAIPTMKFNQEAFKS-------------VEDAECSICLGEYQDKEV 101
+P R GL+ ++ AIP KF + ++ ECS+CL E+QD+E
Sbjct: 91 SPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEK 150
Query: 102 LRIMPQCGHSFHLACIDIWLRKKTTCPVCR 131
LRI+P C H FH+ CID+WL+ CP+CR
Sbjct: 151 LRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSV--EDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
GL+ ++ PT +++ + E ECS+CL E++D E LR++P+C H FH CID
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 120 WLRKKTTCPVCRLPL 134
WLR TTCP+CR L
Sbjct: 175 WLRSHTTCPLCRADL 189
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 63 LEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWLR 122
L+P ++ IP ++ + +S + ECS+CL E+++ + R++P+CGH FH+ CID W R
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146
Query: 123 KKTTCPVCRLPLQ--DPLGRKHAREATFSMAQAVDSPET 159
+++CP+CR P+Q P+ A F + ++ E
Sbjct: 147 SRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEA 185
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDA--ECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
GL ++ + P+ ++Q + EC+ICL E++D+E LR+MP C H+FH +CID+
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 120 WLRKKTTCPVCRLPL 134
WL ++TCPVCR L
Sbjct: 159 WLSSRSTCPVCRASL 173
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL+P ++ ++P F+ E K + EC++CL E+++ E R++P C H+FH+ CID+W
Sbjct: 94 GLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWF 151
Query: 122 RKKTTCPVCR 131
+TCP+CR
Sbjct: 152 HSHSTCPLCR 161
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 56 PGHRIN----GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHS 111
PG+ ++ GL L +P + F +E+F +V D++CS+CLG+YQ + L+ +P C H+
Sbjct: 65 PGNSLSTIELGLSKELREMLPIVVF-KESF-TVMDSQCSVCLGDYQPNDKLQQIPVCKHT 122
Query: 112 FHLACIDIWLRKKTTCPVCRLPLQDPLGRKHAREATFSMA----QAVDSPETS-INH 163
FH+ CID+WL TTCP+CRL L R+ + S+ + PE+ +NH
Sbjct: 123 FHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPVNH 179
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 3 GSGMNLITTVIG-FGMSAAFIVFICTRIICRRIRGVESRPMFEIESG-----IDLEQPAP 56
S NL VI FG+ A + + + ++ ESG +D+ P
Sbjct: 53 ASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPER 112
Query: 57 GHRIN---------GLEPVLVAAIPTMKF--NQEAFKSVEDAECSICLGEYQDKEVLRIM 105
G + + GL+ L+ I K +Q FK + +CSICLGE+ + E LR++
Sbjct: 113 GDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFK-INGTDCSICLGEFNEDESLRLL 171
Query: 106 PQCGHSFHLACIDIWLRKKTTCPVCRLPLQDPLGRK 141
P+C H+FH+ CID WL+ + CP+CR + P ++
Sbjct: 172 PKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQ 207
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 63 LEPVLVAAIPTMKFNQ-EAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
L+ L+ +I K+ + + F VE ++CS+CL E+Q+ E LR++P+C H+FH+ CID WL
Sbjct: 134 LDESLIKSITVYKYRKMDGF--VESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 191
Query: 122 RKKTTCPVCR 131
+ + CP+CR
Sbjct: 192 KSHSNCPLCR 201
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 56 PGHRINGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLA 115
P GL P ++ ++P F+ A ++ ECS+CL E++D E R+MP C H+FH+
Sbjct: 45 PSSTPGGLNPSIIKSLPIFTFS--AVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVH 102
Query: 116 CIDIWLRKKTTCPVCRLPLQ 135
CID+W ++CP+CR ++
Sbjct: 103 CIDMWFHSHSSCPLCRSQIE 122
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 61 NGLEPVLVAAIPTMKFNQ-EAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
+GL ++ +I K+ + F V+ ++CS+CL E+++ E LR++P+C H+FHL CID
Sbjct: 115 DGLNESMIKSITVYKYKSGDGF--VDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172
Query: 120 WLRKKTTCPVCR 131
WL+ + CP+CR
Sbjct: 173 WLKSHSNCPLCR 184
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDA--ECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
GLE ++ + PT +++ + EC+ICL E++D+E LR MP C H+FH CID+
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 120 WLRKKTTCPVCRLPLQDPLGRKH 142
WL +TCPVCR L G +
Sbjct: 154 WLSSWSTCPVCRANLSLKPGESY 176
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 59 RINGLEPVLVAAIPTMKFN-QEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACI 117
R L+ ++ IP ++ + E ECS+CL E+++++ R++P+CGHSFH+ CI
Sbjct: 77 RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCI 136
Query: 118 DIWLRKKTTCPVCRLPLQDPL 138
D W R ++TCP+CR P+Q P
Sbjct: 137 DTWFRSRSTCPLCRAPVQPPF 157
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
G++P ++ +IP + FN + FK V EC +CL E D + R++P C H FH+ CID WL
Sbjct: 63 GIKPYVLRSIPIVDFNTKDFKYV--LECVVCLSELADGDKARVLPSCDHWFHVECIDSWL 120
Query: 122 RKKTTCPVCR 131
+ +TCP+CR
Sbjct: 121 QSNSTCPICR 130
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 61 NGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIW 120
+GL+ + A+P + + +C++CL E+ D + LR++P C H+FHL CID W
Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTW 238
Query: 121 LRKKTTCPVCRLPLQDP---LGRKHAREATFSMAQAVDSPETSINHSRQWLLTHLGHPEV 177
L +TCP+CR L A S Q VD + S+ +++ LG +
Sbjct: 239 LLSNSTCPLCRRSLSTSNVCYNHSETLVAPLSGHQQVDDGKASL--AKRVFSVRLGRFKS 296
Query: 178 NGNNQGHLHSV 188
+Q H V
Sbjct: 297 TNESQSQRHDV 307
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 59 RINGLEPVLVAAIPTMKFN--QEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLAC 116
R GL+ +V + P ++ +E+ +D EC+ICL E +D E +R++P C H FH+ C
Sbjct: 92 RRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDC 151
Query: 117 IDIWLRKKTTCPVCRLPL 134
ID WL TCPVCR L
Sbjct: 152 IDTWLYSHATCPVCRSNL 169
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVED--AECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
GLE LV + P +++ + EC+ICL E+ DKE LR MP C H+FH CID+
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 120 WLRKKTTCPVCRLPL 134
WL ++TCP CR L
Sbjct: 154 WLSSQSTCPACRANL 168
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 61 NGLEPVLVAAIPTMKFNQ-EAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
+GL+ L+ I K+ + + F V +CS+CLGE+ D E LR++P+C H+FH CID
Sbjct: 130 SGLDETLINKITVCKYRRGDGF--VHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDT 187
Query: 120 WLRKKTTCPVCR 131
WL+ + CP+CR
Sbjct: 188 WLKSHSNCPLCR 199
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 21 FIVFICTRIICRRIRGVESRPMFEIESGIDLEQPAPGHR---INGLEPVLVAAIPTMKFN 77
F+VF I CRR SR + D E R GL+ + PT ++
Sbjct: 64 FMVF--GSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYS 121
Query: 78 QEAFKSVE----DAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWLRKKTTCPVCRLP 133
+ K+V EC++CL E++D E LR+MP C H FH C+D+WL + +TCP+CR
Sbjct: 122 E--VKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD 179
Query: 134 L 134
L
Sbjct: 180 L 180
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL+ + + P + ++ EA + C+ICLG+Y+ K +LR +P C H FHL CID WL
Sbjct: 121 GLDEDTIQSYPKILYS-EAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWL 179
Query: 122 RKKTTCPVCRL-PLQDPLGRKHAREATFSMAQAV 154
R TCPVCR PL PL A + + A
Sbjct: 180 RLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAA 213
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 2 WGSGMNLITTVIGFGMSAAFIVFICTRIICRRIRGVESRPMFEIESGIDLEQPAPGHRIN 61
+ S + LI V+ ++ + +R C +R + SR + D P P N
Sbjct: 24 FNSDLVLILAVLLCALTCIIGLIAVSR--CAWLRRIASR------NRSDQTHPPPVAAAN 75
Query: 62 -GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIW 120
GL+ ++ ++P + ++ ++ + + EC+ICL E+ + LR++PQCGH FH++CID W
Sbjct: 76 KGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTW 135
Query: 121 LRKKTTCPVCR 131
L ++CP CR
Sbjct: 136 LGSHSSCPSCR 146
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVE--DAECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
GL+ +V PT ++ + + + EC+ICL E++D E LR++P+C H FH CID
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158
Query: 120 WLRKKTTCPVCRLPLQDPLGRKHA-----REATFSMAQAVDSPE 158
WL TCPVCR L + + + E + Q V +PE
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPE 202
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 68 VAAIPTMKFNQEAFKSV------------EDAECSICLGEYQDKEVLRIMPQCGHSFHLA 115
V IPT+ ++ A S+ + ECS+CL E+++ E LR++P+C H+FHL
Sbjct: 102 VWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLN 161
Query: 116 CIDIWLRKKTTCPVCRLPL 134
CID WL CP+CR P+
Sbjct: 162 CIDTWLLSHKNCPLCRAPV 180
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL+ L+ A+P + +E + E +C++CL E+ + + LR++P C H+FH+ CID WL
Sbjct: 118 GLDQALIDALPVFLY-KEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWL 176
Query: 122 RKKTTCPVCR 131
+TCP+CR
Sbjct: 177 LSNSTCPLCR 186
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 62 GLEPVLVAAIPTMKFNQ-EAFK-SVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
G++ ++ + P +++ +AFK EC+ICL E++D+E LR MP C H+FH CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 120 WLRKKTTCPVCRLPL 134
WL ++TCPVCR L
Sbjct: 151 WLSSRSTCPVCRANL 165
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 59 RINGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACID 118
R GL+ ++ +I + + +E +C +CL E+++ E LR++P+C H+FH++CID
Sbjct: 148 RTTGLQQSIINSITICNY-KRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCID 206
Query: 119 IWLRKKTTCPVCR 131
WL T CP+CR
Sbjct: 207 TWLSSHTNCPLCR 219
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Query: 45 IESGIDLEQPAPGHRINGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRI 104
+ + + + +P R GL+ V ++P ++ + A + ED C ICL ++++ E +++
Sbjct: 100 LSTSVVVSRPYSFRR--GLDSQAVRSLPVYRYTKAAKQRNED--CVICLSDFEEGETVKV 155
Query: 105 MPQCGHSFHLACIDIWLRKKTTCPVCR---------LPLQDPLGRKHARE 145
+P CGH FH+ C+D WL TCP+CR L +Q+P + A E
Sbjct: 156 IPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPPDQDSAEE 205
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL+ + P ++ K + EC+ICLGE+ D E +R++P C HSFH++CID WL
Sbjct: 79 GLKKRELKKFPVAEYGSGEVK-IAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 122 RKKTTCPVCRLPL 134
++CP CR L
Sbjct: 138 VSHSSCPNCRHSL 150
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 61 NGLEPVLVAAIPTMKFNQEAFKSVEDA-ECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
+G++ ++ ++P +F A +D EC++CL ++ EVLR++P+C H+FH+ C+D
Sbjct: 119 SGIDRSVIESLPVFRFG--ALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDT 176
Query: 120 WLRKKTTCPVCRLPLQDP 137
WL +TCP+CR + DP
Sbjct: 177 WLDAHSTCPLCRYRV-DP 193
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 50 DLEQPAPGHRINGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCG 109
DL A GL+P ++ + P ++ A K EC+ICL E+ D++ +R++ C
Sbjct: 65 DLIHVATPPENTGLDPFIIRSFPVFHYSS-ATKKNHGTECAICLSEFSDEDTVRLITVCR 123
Query: 110 HSFHLACIDIWLRKKTTCPVCRLPLQDP 137
H FH CID+W TCPVCR L DP
Sbjct: 124 HPFHSNCIDLWFELHKTCPVCRCEL-DP 150
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL ++++P + F Q++ K + ECSICL E + R++P+C HSFH+ CID+W
Sbjct: 102 GLTSFELSSLPIVFFRQDSCK--DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWF 159
Query: 122 RKKTTCPVCR 131
+ +TCP+CR
Sbjct: 160 QSHSTCPICR 169
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 60 INGLEPVLVAAIPTMKF--------NQEAFKSVEDAE--CSICLGEYQDKEVLRIMPQCG 109
+ GL+ ++ + P F N + F E E CSICL EY ++E+LR+MP+C
Sbjct: 97 VGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECK 156
Query: 110 HSFHLACIDIWLRKKTTCPVCR-LPLQDP 137
H FH+ C+D WL+ +CPVCR PL P
Sbjct: 157 HYFHVYCLDAWLKLNGSCPVCRNSPLPTP 185
>sp|Q9LJL6|ATL62_ARATH Putative RING-H2 finger protein ATL62 OS=Arabidopsis thaliana
GN=ATL62 PE=5 SV=1
Length = 141
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 59 RINGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACID 118
+ G+ P ++ +IP + FN AFK ++ EC +CL ++ D++ R++P C H FH D
Sbjct: 51 KATGINPSVLLSIPVVSFNANAFK--DNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTD 108
Query: 119 IWLRKKTTCPVCRLPLQD 136
WL TCP CR +++
Sbjct: 109 TWLHSDYTCPNCRKNVEE 126
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 61 NGLEPVLVAAIPTMKFNQ---------EAFKSVEDAECSICLGEYQDKEVLRIMPQCGHS 111
+GL+ + A+P + + + E +C++CL E+ +K+ LR++P C H+
Sbjct: 106 SGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHA 165
Query: 112 FHLACIDIWLRKKTTCPVCRLPLQDP 137
FHL CID WL+ +TCP+CR L P
Sbjct: 166 FHLNCIDTWLQSNSTCPLCRGTLFSP 191
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDA--ECSICLGEYQDKEVLRIMPQCGHSFHLACIDI 119
GL+ + PT +++ + + EC+ICL E++D E LR++P+C H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 120 WLRKKTTCPVCRLPLQD 136
WL+ TCPVCR L +
Sbjct: 155 WLQGHVTCPVCRTNLAE 171
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 57 GHRIN--GLEPVLVAAIPTMKFNQEAFKS--VEDAECSICLGEYQDKEVLRIMPQCGHSF 112
GHR++ ++ ++P KF+ +S + +C++CL +++ ++ LR++P C H+F
Sbjct: 81 GHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAF 140
Query: 113 HLACIDIWLRKKTTCPVCRLPL 134
H CIDIWL TCP+CR PL
Sbjct: 141 HADCIDIWLVSNQTCPLCRSPL 162
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 9 ITTVIGFGMSAAFIVFICTRIICRRIRGVESRPMFEIESGIDLEQPAPGHRIN-GLEPVL 67
I +I F M A++I C R +S E S + L+ P+P + GL+ +
Sbjct: 23 ILVLISFIMLASYI---CIR--------SKSTGRDEATSDVVLDLPSPAAEVKLGLDRPV 71
Query: 68 VAAIPTMKF-NQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWLRKKTT 126
+ + P + + + CSICL +Y+ +E +R +P+C H FH C+D WLR T
Sbjct: 72 IESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSAT 131
Query: 127 CPVCR 131
CP+CR
Sbjct: 132 CPLCR 136
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 61 NGLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIW 120
+G++ L+ +P + + +C +CL E++ ++ LR++P+C H+FH+ CID W
Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTW 157
Query: 121 LRKKTTCPVCRLPLQDPLGRKHAREATF 148
L +TCP+CR L H +++
Sbjct: 158 LLSHSTCPLCRSNLLSGFSSHHNLSSSY 185
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL+ +++A++PT + V EC++CL ++K+ R++P C H FH++C+D WL
Sbjct: 75 GLDSLVIASLPTFVVGIK--NDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWL 132
Query: 122 RKKTTCPVCR 131
++TCPVCR
Sbjct: 133 TTQSTCPVCR 142
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 88 ECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWLRKKTTCPVCRL 132
EC++CL E +D E R +P+CGH FH C+D+WL +TCP+CRL
Sbjct: 133 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRL 177
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 50 DLEQP--APGHRINGLEPVLVAAIPTMKFNQEAFKSVE----DAECSICLGEYQDKEVLR 103
D+E+ +P GL+ + + P+ + + + +E + EC +CL E++D E LR
Sbjct: 42 DIEEARMSPRRPPRGLDAEAIKSFPSFVYTEA--RGIEPGIGELECVVCLNEFKDDETLR 99
Query: 104 IMPQCGHSFHLACIDIWLRKKTTCPVCR 131
++P C H FH C+DIWL +TCP+CR
Sbjct: 100 LVPPCVHVFHADCVDIWLSHSSTCPICR 127
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 62 GLEPVLVAAIPTMKFNQEAFKSVEDAECSICLGEYQDKEVLRIMPQCGHSFHLACIDIWL 121
GL+ + IP + ++ EC ICLG+++D E +R++P+C H FH+ CID WL
Sbjct: 88 GLKKQALKQIPVGLYG-SGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWL 146
Query: 122 RKKTTCPVCR--LPLQDP 137
+++CP CR L L+ P
Sbjct: 147 LSRSSCPTCRQSLLLEQP 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,995,959
Number of Sequences: 539616
Number of extensions: 2995661
Number of successful extensions: 7599
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 7038
Number of HSP's gapped (non-prelim): 781
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)