BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029548
(191 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 103/168 (61%), Gaps = 13/168 (7%)
Query: 37 AAHPWHDLEIGPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHNYGFI 83
++P+HDLE GP P++ +IEI KGS K+DRVLYS YP +YG I
Sbjct: 8 GSNPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGII 67
Query: 84 PRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHY 143
PRT ED+DP D+++IM+EPV P + A+ IGL MID G+KD K++AV +DP ++ +
Sbjct: 68 PRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDW 127
Query: 144 NDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 191
DI ++P L EI FF+ YK+ + KE+ V + A A + +++
Sbjct: 128 KDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAI 175
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|B Chain B, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|C Chain C, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
Length = 195
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 13/172 (7%)
Query: 33 RRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHN 79
R S +P+HDLE GP P++ +IEI KGS K+DRVLY+ YP +
Sbjct: 13 RGSHMMNPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVD 72
Query: 80 YGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPE 139
YG IPRT ED DP D+++IM+EP P + A+ IGL MID G+KD K++AV +DP
Sbjct: 73 YGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPY 132
Query: 140 YRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 191
++ + DI ++P L EI FF+ YK+ E KE+ V + A A + +++
Sbjct: 133 FKDWKDISDVPKAFLDEIAHFFKRYKELEGKEIIVEGWEGAEAAKREILRAI 184
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From
Thermococcus Thioreducens Bound To Hydrolyzed Product At
0.99 Angstrom Resolution
Length = 178
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 39 HPWHDLEIGPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHNYGFIPR 85
+P+H+LE GP P++ +IEI KGS K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 86 TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 145
T +D DP D+++IM+EPV P + A+ IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 146 IKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 191
I ++P L EI FF+ YK+ + K + + A +A + +++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|B Chain B, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|C Chain C, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|D Chain D, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|E Chain E, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|F Chain F, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3Q4W|A Chain A, The Structure Of Archaeal Inorganic Pyrophosphatase In
Complex With Substrate
pdb|3Q5V|A Chain A, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q5V|B Chain B, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q9M|A Chain A, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|B Chain B, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|C Chain C, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q3L|A Chain A, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|B Chain B, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|C Chain C, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|D Chain D, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|E Chain E, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|F Chain F, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3R5U|A Chain A, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5U|B Chain B, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5V|A Chain A, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|B Chain B, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|C Chain C, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|D Chain D, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|E Chain E, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|F Chain F, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
Length = 178
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 39 HPWHDLEIGPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHNYGFIPR 85
+P+H+LE GP P++ +IEI KGS K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 86 TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 145
T +D DP D+++IM+EPV P + A+ IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 146 IKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 191
I ++P L EI FF+ YK+ + K + + A +A + +++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|B Chain B, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|C Chain C, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|D Chain D, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|E Chain E, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|F Chain F, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
Length = 178
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 39 HPWHDLEIGPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHNYGFIPR 85
+P+H+LE GP P++ +IEI KGS K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 86 TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 145
T +D DP D+ +I +EPV P + A+ IG+ D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIXVIXREPVYPLTIIEARPIGIXKXEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 146 IKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 191
I ++P L EI FF+ YK+ + K + + A +A + +++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|B Chain B, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|C Chain C, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|D Chain D, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|E Chain E, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|F Chain F, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase
Length = 173
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
Query: 47 GPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHNYGFIPRTLCEDNDP 93
G AP + N ++EI +GS KVDRVLY+S+ YP NYGFIP TL ED DP
Sbjct: 6 GKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDP 65
Query: 94 LDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPP 151
LDVL+I + PG + + IG++ M D+ +D KI+AV D DP + + DI +LP
Sbjct: 66 LDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQ 125
Query: 152 HRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
+I FFE YK+ E K V ++ + A++A N +Q ++
Sbjct: 126 ATKNKIVHFFEHYKELEPGKYVKISGWGSATEAKNRIQLAI 166
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|B Chain B, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|C Chain C, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
Length = 169
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 54 FNCVIEIGKGSK-------------VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 100
F+ IEI KG + +DR LY+ + YP +YGFI TL +D DPLD L+++
Sbjct: 10 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 69
Query: 101 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRF 160
+PV PG + A+ +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 70 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 129
Query: 161 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
F YK E K V D++ ++A VQ+S+
Sbjct: 130 FVHYKDLEPGKFVKAADWVDRAEAEAEVQRSV 161
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0
Length = 172
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 54 FNCVIEIGKGSK-------------VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 100
F+ IEI KG + +DR LY+ + YP +YGFI TL +D DPLD L+++
Sbjct: 13 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 72
Query: 101 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRF 160
+PV PG + A+ +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 73 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 132
Query: 161 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
F YK E K V D++ ++A VQ+S+
Sbjct: 133 FVHYKDLEPGKFVKAADWVDRAEAEAEVQRSV 164
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0
Length = 171
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 54 FNCVIEIGKGSK-------------VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 100
F+ IEI KG + +DR LY+ + YP +YGFI TL +D DPLD L+++
Sbjct: 12 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 71
Query: 101 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRF 160
+PV PG + A+ +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 72 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 131
Query: 161 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
F YK E K V D++ ++A VQ+S+
Sbjct: 132 FVHYKDLEPGKFVKAADWVDRAEAEAEVQRSV 163
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
Length = 180
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 17/166 (10%)
Query: 43 DLEIGPGAPKIFNCVIEIGKGSK--------------VDRVLYSSVVYPHNYGFIPRTLC 88
++ +G P+ N ++E+ G + VDR LY+S+VYP NYGF+P TL
Sbjct: 9 EIAVGKNPPEDVNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSMVYPGNYGFVPHTLS 68
Query: 89 EDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYN--DI 146
ED DP+DVLI P+LPGC + IG + M D G KD+KIIA+ R+ N D
Sbjct: 69 EDGDPIDVLICNTRPLLPGCVINVYPIGALIMEDDGGKDEKIIAIPTPKLTQRYNNIHDY 128
Query: 147 KELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
+LP L +I FFE YK E K + + S A+ ++Q++
Sbjct: 129 TDLPEITLKQIEHFFEHYKDLEPGKWAKIEGWRDKSFAHELIKQAI 174
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
pdb|4ECP|B Chain B, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
Length = 167
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 14/159 (8%)
Query: 47 GPGAPKIFNCVIEIGKGSK-------------VDRVLYSSVVYPHNYGFIPRTLCEDNDP 93
GPG+ F+ IEI KG + +DR LY+ + YP +YGFI TL ED DP
Sbjct: 1 GPGSMVQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDP 60
Query: 94 LDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHR 153
LD L+++ EP+ PG + A+ +G+ M+D+ DDK++ V +D + H + I ++P
Sbjct: 61 LDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFE 120
Query: 154 LAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
L I+ FF YK E K V D++ +A VQ+S+
Sbjct: 121 LDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSV 159
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Thermus Thermophilus
Length = 174
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 44 LEIGPGAPKIFNCVIEIGKGS-------------KVDRVLYSSVVYPHNYGFIPRTLCED 90
L +G AP++ + VIE+ +GS K+DRVL + YP +YGFIP TL ED
Sbjct: 6 LPVGDKAPEVVHMVIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAED 65
Query: 91 NDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELP 150
DPLD L++ P+LPG + + +GL+ M D+ D K+I V A+D H DI ++P
Sbjct: 66 GDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVP 125
Query: 151 PHRLAEIRRFFEDYKKNENKE 171
EI+ FFE YK E K+
Sbjct: 126 EGVKQEIQHFFETYKALEAKK 146
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|C Chain C, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|D Chain D, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|E Chain E, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|F Chain F, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|G Chain G, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|H Chain H, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|I Chain I, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|J Chain J, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|K Chain K, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|L Chain L, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
Length = 197
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 44 LEIGPGAPKIFNCVIEIGKGSK--------------VDRVLYSSVVYPHNYGFIPRTLCE 89
+ IG P+ N +IE+ G + VDR LY+ + YP NYGF+P TL E
Sbjct: 27 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSE 86
Query: 90 DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIK 147
D DP+DVL+ P++PGC + + IG++ M D KD+KIIAV + Y +D
Sbjct: 87 DGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYT 146
Query: 148 ELPPHRLAEIRRFFEDYKKNE-NKEVAVNDF 177
++P L +I FFE YK E K V + D+
Sbjct: 147 DMPEITLKQIAHFFEHYKDLEPGKWVKIGDW 177
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
pdb|2BQY|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
Length = 173
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDRVLY + YP NYGF+P TL D DP+D L++ G ++A+ +G++ M D+
Sbjct: 40 VDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESG 99
Query: 126 KDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
D+K+IA+ D DP + + DI +L H L +I+ FFE YK E NK V V F
Sbjct: 100 MDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKES 159
Query: 183 AYNSVQQSM 191
A +++++
Sbjct: 160 AIKVLEKAI 168
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
Length = 173
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDRVLY + YP NYGF+P TL D DP+D L++ G ++A+ +G++ D+
Sbjct: 40 VDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNXEDESG 99
Query: 126 KDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
D+K+IA+ D DP + + DI +L H L +I+ FFE YK E NK V V F
Sbjct: 100 XDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKES 159
Query: 183 AYNSVQQSM 191
A +++++
Sbjct: 160 AIKVLEKAI 168
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3EIY|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound Pyrophosphate
pdb|3EIZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei, H32 Crystal Form
pdb|3EJ0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound
N-(Pyridin-3-Ylmethyl) Aniline, H32 Crystal Form
pdb|3EJ2|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound 5-Amino-1-(4-
Chlorophenyl)-1h-Pyrazole-4-Carbonitrile, H32 Crystal
Form
pdb|3GVF|A Chain A, 1.7 Angstrom Crystal Structure Of Inorganic
Pyrophosphatase From Burkholderia Pseudomallei Bound
With Phosphate
Length = 196
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 16/139 (11%)
Query: 47 GPGAPKIFNCVIEIGKGSK--------------VDRVLYSSVVYPHNYGFIPRTLCEDND 92
G P+ FN +IEI S+ VDR + + + YP NYGFIP+TL D D
Sbjct: 30 GKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGD 89
Query: 93 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELP 150
P+DVL+I P+L G +RA+A+G++ M D+ D K++AV D P + I ++P
Sbjct: 90 PVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVP 149
Query: 151 PHRLAEIRRFFEDYKKNEN 169
+ +I+ FFE YK E
Sbjct: 150 AYLKDQIKHFFEQYKALEK 168
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
pdb|3LD3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
Length = 199
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 17/166 (10%)
Query: 43 DLEIGPGAPKIFNCVIEIGKGSK--------------VDRVLYSSVVYPHNYGFIPRTLC 88
D+ G AP+ N VIE+ + S VDR L +++ YP NYGFIP T+
Sbjct: 26 DIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIA 85
Query: 89 EDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDI 146
D DP+DVL++ + PV+PG + + +G++ M D+ +D K++AV A D Y + +
Sbjct: 86 GDGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNY 145
Query: 147 KELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 191
+LP L I FF YKK E +K V+V + A+ A ++ ++
Sbjct: 146 SDLPSSFLDSISHFFSFYKKLEKDKFVSVGCWQDAASAKELIRSAI 191
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Ehrlichia Chaffeensis
Length = 193
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 17/145 (11%)
Query: 47 GPGAPKIFNCVIEIGKGSK--------------VDRVLYSSVVYPHNYGFIPRTLCEDND 92
G PK N +IEI + S VDR L +S+ YP NYGFIP T D D
Sbjct: 30 GDNVPKEINVIIEISQNSCPVKYEFDKEKNLFCVDRFLPTSMYYPCNYGFIPHTCAGDGD 89
Query: 93 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELP 150
P+DVL+ + PV+ G +RA+ +G++ M D+ +D KI+AV D Y + D + P
Sbjct: 90 PVDVLVASRFPVMSGAVIRARPVGVLVMHDESGEDVKILAVPTHKVDQYYNNIKDYSDFP 149
Query: 151 PHRLAEIRRFFEDYKK-NENKEVAV 174
L I FF YKK E+K V+V
Sbjct: 150 VSFLNSISHFFTFYKKLEEDKFVSV 174
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3EMJ|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|G Chain G, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|H Chain H, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|I Chain I, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|J Chain J, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|K Chain K, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|L Chain L, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
Length = 173
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + +++ YP NYGFIP TL D DP+DVL++ PV+PG ++ +AIG++ M D+
Sbjct: 42 VDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESG 101
Query: 126 KDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
D+KIIAV D + H ++ +L I FFE YK E K V V +
Sbjct: 102 LDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEKGKWVKVTGWGDKVK 161
Query: 183 AYNSVQQSM 191
A +++ +
Sbjct: 162 AETLIKEGI 170
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase
pdb|2EIP|B Chain B, Inorganic Pyrophosphatase
pdb|1IPW|A Chain A, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1IPW|B Chain B, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1JFD|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1JFD|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1FAJ|A Chain A, Inorganic Pyrophosphatase
pdb|1INO|A Chain A, Recombinant Inorganic Pyrophosphatase From Escherichia
Coli
Length = 175
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + +++ YP NYG+I TL D DP+DVL+ P+ PG +R + +G++ M D+
Sbjct: 41 VDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|C Chain C, Structure Of Inorganic Pyrophosphatase
pdb|1I6T|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1I40|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|2AU6|A Chain A, Crystal Structure Of Catalytic Intermediate Of Inorganic
Pyrophosphatase
pdb|2AU8|A Chain A, Catalytic Intermediate Structure Of Inorganic
Pyrophosphatase
pdb|2AU9|A Chain A, Inorganic Pyrophosphatase Complexed With Substrate
pdb|2AUU|A Chain A, Inorganic Pyrophosphatase Complexed With Magnesium
Pyrophosphate And Fluoride
pdb|1IGP|A Chain A, X-Ray Crystallographic Studies Of Recombinant Inorganic
Pyrophosphatase From Escherichia Coli
Length = 175
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + +++ YP NYG+I TL D DP+DVL+ P+ PG R + +G++ M D+
Sbjct: 41 VDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n
Length = 175
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + +++ YP NYG+I TL D DP+DVL+ P+ PG +R + +G++ M ++
Sbjct: 41 VDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTNEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n
pdb|1MJW|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D42n
Length = 175
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
V+R + +++ YP NYG+I TL D DP+DVL+ P+ PG +R + +G++ M D+
Sbjct: 41 VNRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n
pdb|1MJX|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D65n
Length = 175
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + +++ YP NYG+I TL + DP+DVL+ P+ PG +R + +G++ M D+
Sbjct: 41 VDRFMSTAMFYPCNYGYINHTLSLNGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n
pdb|1MJY|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D70n
Length = 175
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + +++ YP NYG+I TL D DP++VL+ P+ PG R + +G++ M D+
Sbjct: 41 VDRFMSTAMFYPCNYGYINHTLSLDGDPVNVLVPTPYPLQPGSVTRCRPVGVLKMTDEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic
Pyrophosphatase
Length = 175
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VD+ + +++ YP NYG+I TL D DP+DVL+ P+ PG R + +G++ M D+
Sbjct: 41 VDQFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAG 100
Query: 126 KDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
+D K++AV EY H D+ +LP A+I FFE YK E K V V + A
Sbjct: 101 EDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160
Query: 183 AYNSVQQSM 191
A + S
Sbjct: 161 AKAEIVASF 169
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|B Chain B, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|C Chain C, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|D Chain D, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|E Chain E, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|F Chain F, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
Length = 178
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR +S YP NYGF+P TL +D DPLDVL++ PV PG R +A+G+ D+
Sbjct: 43 VDRFXPTSXRYPCNYGFVPSTLAQDGDPLDVLVLTPVPVQPGVLXRVRALGIXKXEDEAG 102
Query: 126 KDDKIIAV-----CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLP 179
+D K++AV C Y +K++ L I FFE YK E NK V +
Sbjct: 103 EDSKVLAVPVVKACR---AYEAIQSLKDISSLLLDAISHFFERYKDLEPNKWAKVKGWED 159
Query: 180 ASDAYNSVQQSM 191
A + S+
Sbjct: 160 KEAAKKEFEASI 171
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The
Oil- Degrading Bacterium Oleispira Antarctica
Length = 176
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 66 VDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGE 125
VDR + YP NYG+I TL +D D LDVL+I PV PG +RA+ +G++ D+
Sbjct: 43 VDRFXATPXFYPANYGYINNTLADDGDALDVLVITPYPVAPGSVIRARPVGVLKXSDEAG 102
Query: 126 KDDKIIAVCADDPE--YRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASD 182
D+K++AV + Y +DI ++P +I FFE YK E K V V + A
Sbjct: 103 GDEKLLAVPHEKLTQLYNDIHDIDDVPQLLKDQIVHFFEHYKDLEKGKWVKVEGWENADA 162
Query: 183 AYNSVQQS 190
A ++ +S
Sbjct: 163 ARAAIVKS 170
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|8PRK|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
Length = 287
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HNYG P+T +
Sbjct: 53 WTNAKLEITKEETLNPIIQDTKKGKLKFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 112
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 113 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 172
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 173 EDVEKYFPGLLRATNEWFRIYK 194
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1M38|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 287
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HNYG P+T +
Sbjct: 53 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 112
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 113 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 172
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 173 EDVEKYFPGLLRATNEWFRIYK 194
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGI|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1E6A|A Chain A, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|1E6A|B Chain B, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|2IHP|A Chain A, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|2IHP|B Chain B, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|1E9G|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1E9G|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 286
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HNYG P+T +
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
pdb|2IK0|B Chain B, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
Length = 286
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HNYG P+T +
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUK|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HNYG P+T +
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase
pdb|1YPP|B Chain B, Acid Anhydride Hydrolase
Length = 286
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 76 YPHNYGFIPRTLCE------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQ 123
Y HNYG P+T + DNDP+DVL I + G + KA+G+M ++D+
Sbjct: 89 YIHNYGAFPQTWEDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDE 148
Query: 124 GEKDDKIIAVCADDPEYRHYNDIKELP---PHRLAEIRRFFEDYK 165
GE D K+IA+ +DP NDI+++ P L +F YK
Sbjct: 149 GETDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUJ|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HNYG P+T +
Sbjct: 52 WTNAKLEITREETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
pdb|1PYP|B Chain B, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
Length = 285
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGS-KVDRVLYSSVVYPHNYGFIPRTL------------ 87
W + ++ + N +I+ KG + R + Y HNYG P+T
Sbjct: 52 WTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETKA 111
Query: 88 CEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIK 147
DN+P+DVL I + G KA+G+M ++D+GE D K+IA+ +DP NDI+
Sbjct: 112 VGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIE 171
Query: 148 ELP---PHRLAEIRRFFEDYK 165
++ P L +F YK
Sbjct: 172 DVEKYFPGLLRATDEWFRIYK 192
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
pdb|2IK1|B Chain B, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTLCE--------- 89
W + ++ + N +I+ K K+ R + Y HN+G P+T +
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNFGAFPQTWEDPNVSHPETK 111
Query: 90 ---DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
pdb|2IK7|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTL----------- 87
W + ++ + N +I+ K K+ R + Y HNYG P+T
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 88 -CEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP++VL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPINVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|117E|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|2IK4|A Chain A, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
pdb|2IK4|B Chain B, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTL----------- 87
W + ++ + N +I+ K K+ R + Y HNYG P+T
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 88 -CEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DN+P+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNEPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
pdb|2IK6|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTL----------- 87
W + ++ + N +I+ K K+ R + Y HNYG P+T
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 88 -CEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP++VL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIEVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
pdb|2IK9|B Chain B, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTL----------- 87
W + ++ + N +I+ K K+ R + Y HNYG P+T
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 88 -CEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
DNDP+DVL I + G + KA+G+M ++D+GE + K+IA+ +DP NDI
Sbjct: 112 AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETEWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
pdb|2IK2|B Chain B, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 41 WHDLEIGPGAPKIFNCVIEIGKGSKVD--RVLYSSVVYPHNYGFIPRTL----------- 87
W + ++ + N +I+ K K+ R + Y HNYG P+T
Sbjct: 52 WTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK 111
Query: 88 -CEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 146
+NDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +DP NDI
Sbjct: 112 AVGENDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDI 171
Query: 147 KELP---PHRLAEIRRFFEDYK 165
+++ P L +F YK
Sbjct: 172 EDVEKYFPGLLRATNEWFRIYK 193
>pdb|1Q05|A Chain A, Crystal Structure Of The Cu(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q05|B Chain B, Crystal Structure Of The Cu(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q06|A Chain A, Crystal Structure Of The Ag(i) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q06|B Chain B, Crystal Structure Of The Ag(i) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q07|A Chain A, Crystal Structure Of The Au(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q07|B Chain B, Crystal Structure Of The Au(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
Length = 135
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 136 DDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDA 183
+DP+ RH D+K ++AEI R E+ + ++ +A+ + P D+
Sbjct: 71 NDPQ-RHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDS 117
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 157 IRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 191
+ RFFE +N++ V + +FL A ++ SM
Sbjct: 59 VERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSM 93
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 26.6 bits (57), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 154 LAEIRRFFEDYKKNENKEVAVNDFLPAS 181
LAE R+ + Y NK+ ++ FLPA+
Sbjct: 209 LAEFRKQLDAYGSTNNKKYVLSAFLPAN 236
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,137,641
Number of Sequences: 62578
Number of extensions: 258407
Number of successful extensions: 636
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 553
Number of HSP's gapped (non-prelim): 48
length of query: 191
length of database: 14,973,337
effective HSP length: 93
effective length of query: 98
effective length of database: 9,153,583
effective search space: 897051134
effective search space used: 897051134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)