BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029554
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80543|Y1280_ARATH Putative methyltransferase At1g22800 OS=Arabidopsis thaliana
GN=At1g22800 PE=2 SV=2
Length = 355
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/186 (65%), Positives = 146/186 (78%), Gaps = 8/186 (4%)
Query: 13 LLRR--RRANNEPYALVPSGSFCTDNGF----ETTSNGSSRVSIFDRHLKRKQRDRAAWL 66
LL+R ++ + + + S SF T+ + E N SS+V IFDR LKR RDRAAWL
Sbjct: 13 LLKRVPEKSTKQAHTFLASLSFSTEGAYGGDGEFQQN-SSKVKIFDRDLKRIHRDRAAWL 71
Query: 67 TR-PNDSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSY 125
+R NDSFVDAVA+NLLDRLEDC+K+FPTA CLGGSL AV+RLLRGRGGIEKLIMMDTSY
Sbjct: 72 SRQKNDSFVDAVADNLLDRLEDCKKSFPTAFCLGGSLGAVKRLLRGRGGIEKLIMMDTSY 131
Query: 126 DMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVS 185
DM+K C+DAQ D+ +++IET + VGDEEFLP+KESS+DL IS LGLHWTNDLPG+MIQ
Sbjct: 132 DMIKSCRDAQDDSLDNSIETSYFVGDEEFLPVKESSVDLIISSLGLHWTNDLPGSMIQCK 191
Query: 186 IFLLPD 191
+ L PD
Sbjct: 192 LALKPD 197
>sp|Q5TEU4|NDUF5_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Homo sapiens GN=NDUFAF5 PE=1 SV=1
Length = 345
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 39 ETTSNGSSR-------VSIFDRHLKRKQRDRAAWLTRPN--DSFVDAVAENLLDRLEDCR 89
E TS S R ++IFDR LKRKQ++ AA P D + V + DR+ D
Sbjct: 28 EVTSGVSPRGSTSPRTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIP 87
Query: 90 KTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDT--SYDMLKLCKDAQQDAHNDNIETCF 147
+ FP AL LG GRG I + + +T + + ++A +++ I T
Sbjct: 88 RNFPLALDLGC----------GRGYIAQYLNKETIGKFFQADIAENALKNSSETEIPTVS 137
Query: 148 VVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLPD 191
V+ DEEFLP KE++ DL +S L LHW NDLP A+ Q+ L PD
Sbjct: 138 VLADEEFLPFKENTFDLVVSSLSLHWVNDLPRALEQIHYILKPD 181
>sp|Q5RBS1|NDUF5_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Pongo abelii GN=NDUFAF5 PE=2 SV=1
Length = 345
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 48 VSIFDRHLKRKQRDRAAWLTRPN--DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAV 105
++IFDR LKRKQ++ AA P D + V + DR+ D + FP AL LG
Sbjct: 44 LNIFDRDLKRKQKNWAAQQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGC----- 98
Query: 106 RRLLRGRGGIEKLIMMDT--SYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLD 163
GRG I + + +T + + ++A +++ I T V+ DEEFLP +E++ D
Sbjct: 99 -----GRGYIAQYLNKETIGKFFQADIAENALKNSLETEIPTVSVLADEEFLPFRENTFD 153
Query: 164 LAISCLGLHWTNDLPGAMIQVSIFLLPD 191
L +S L LHW NDLP A+ Q+ L PD
Sbjct: 154 LVVSSLSLHWVNDLPRALEQIHYILKPD 181
>sp|A3KP37|NDUF5_DANRE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Danio rerio GN=ndufaf5 PE=2 SV=1
Length = 321
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 48 VSIFDRHLKRKQRDRAAWL--TRPNDSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAV 105
+++FDR +KR+Q+D A+ L + D + V + DR+ D +TFP AL +G +
Sbjct: 24 MNVFDRSMKRRQKDWASSLLDSSKYDYLREEVGSRVADRVYDVARTFPLALDVGCGRSHI 83
Query: 106 RRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLA 165
L + +E+L + D S L+ + +I V+ DEEFLP KE++ DL
Sbjct: 84 AEHL-SKEVVERLFLTDISSSSLR-------NRKTSDIPAQCVMADEEFLPFKENTFDLV 135
Query: 166 ISCLGLHWTNDLPGAMIQVSIFLLPD 191
+S L +HW NDLPGA+ Q+ L PD
Sbjct: 136 LSSLSMHWINDLPGALRQIHQVLKPD 161
>sp|A2APY7|NDUF5_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Mus musculus GN=Ndufaf5 PE=2 SV=1
Length = 343
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 36 NGFETTSNGSSR-VSIFDRHLKRKQRDRAAWLTRPN--DSFVDAVAENLLDRLEDCRKTF 92
+G + + S R ++IFDR LKRKQ++ AA P D + V + DR+ D + F
Sbjct: 31 SGVPPSGSTSPRALNIFDRELKRKQKNWAARQPDPMKFDYLKEEVGSRIADRVYDIARDF 90
Query: 93 PTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLK--LCKDAQQDAHNDNIETCFVVG 150
P AL +G GRG I + + +T + + + + A +++ +I T ++
Sbjct: 91 PLALDIGC----------GRGYIAQHLDKETVGKIFQTDIAEHALKNSLETDIPTVNILA 140
Query: 151 DEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLPD 191
DEEFLP +E++ DL +S L LHW NDLP A+ Q+ L PD
Sbjct: 141 DEEFLPFQENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPD 181
>sp|B2GV71|NDUF5_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Rattus norvegicus GN=Ndufaf5 PE=2 SV=1
Length = 343
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 48 VSIFDRHLKRKQRDRAAWLTRPN--DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAV 105
++IFDR LKRKQ++ AA P D + + + DR+ D + FP AL +G
Sbjct: 44 LNIFDRELKRKQKNWAARQPEPMKFDYLKEEIGSRIADRVYDIARDFPLALDIGC----- 98
Query: 106 RRLLRGRGGIEKLIMMDTSYDMLK--LCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLD 163
GRG I + + +T + + + + A +++ +I T ++ DEEFLP E++ D
Sbjct: 99 -----GRGYIAQHLNKETVGKIFQTDIAEHALKNSIETDIPTVNILADEEFLPFPENTFD 153
Query: 164 LAISCLGLHWTNDLPGAMIQVSIFLLPD 191
L +S L LHW NDLP A+ Q+ L PD
Sbjct: 154 LVVSSLSLHWVNDLPRALEQIHYVLKPD 181
>sp|Q54JW0|NDUF5_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Dictyostelium discoideum GN=ndufaf5 PE=3 SV=1
Length = 436
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 46 SRVSIFDRHLKRKQRDRAAWLT---RPNDSFVDAVAENLLDRLEDCRKTF-PTALCLGGS 101
++++IFD ++K Q++ + D ++ VA+ L DR+ D + L G
Sbjct: 29 TKMTIFDTNVKTIQKNNTVTNVDDPKHYDYLMNEVADRLADRILDIKDIKCGNVLDFGSR 88
Query: 102 LEAVRRLLRGRGG-IEKLIMMDTSYDML-----KLCKDAQQDAHNDNIE-TCFVVG--DE 152
A+ + ++ +G I+K M+++S ++L + ++ + D +N+ ++ T +V ++
Sbjct: 89 NGALFKYIQEKGAKIDKYYMVESSKELLYRDDNNVSQENEDDNNNNKVKPTKILVNSLED 148
Query: 153 EFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLPD 191
+ +++ SLDL IS L LHW NDLPG + L P+
Sbjct: 149 KIEGIEDQSLDLIISNLSLHWVNDLPGVFGGLKRLLKPN 187
>sp|B2IAI0|BIOC_XYLF2 Malonyl-CoA O-methyltransferase BioC OS=Xylella fastidiosa (strain
M23) GN=bioC PE=3 SV=1
Length = 295
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 50 IFDRHLKRKQRDRAAWLTRPNDSFVDAVAENLLDRLEDCRKTFPTALC-LGGSLEAVRRL 108
+FD + R+ RAA N V + LL+ L+ P + +G
Sbjct: 4 LFDTYHIRRAFSRAAHSYDTNAVLQHEVEQRLLESLDYLGDRIPRVILDVGAGTGRASIA 63
Query: 109 LRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISC 168
++ R ++I +D + ML+ +A++ +H N + GD LP+ ++S+D+ S
Sbjct: 64 MKKRWPKAQVIALDQAMPMLQ---EARKRSHWWN-PLALIYGDARTLPVADASVDVIFSN 119
Query: 169 LGLHWTNDLP 178
L L W DLP
Sbjct: 120 LCLQWIEDLP 129
>sp|P36571|BIOC_SERMA Malonyl-CoA O-methyltransferase BioC OS=Serratia marcescens GN=bioC
PE=1 SV=1
Length = 255
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 107 RLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAI 166
R+ R RG +++ +D + ML + + Q H +++GD E +PL ++++D+
Sbjct: 62 RMWRERG--KRVTALDLAPGMLDVARQRQAAHH-------YLLGDIEQVPLPDAAMDICF 112
Query: 167 SCLGLHWTNDLPGAMIQV 184
S L + W +DLP A+ ++
Sbjct: 113 SSLVVQWCSDLPAALAEL 130
>sp|A6UYW3|BIOC_PSEA7 Malonyl-CoA O-methyltransferase BioC OS=Pseudomonas aeruginosa
(strain PA7) GN=bioC PE=3 SV=1
Length = 274
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 113 GGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLH 172
GG E L +D + ML+ + +H F+ GD E LPL++ S DL S L +
Sbjct: 80 GGGEGL-AVDIAEGMLRHARARGGASH-------FIGGDAERLPLRDGSCDLLFSSLAIQ 131
Query: 173 WTNDLPGAMIQVSIFLLP 190
W DLP + + L P
Sbjct: 132 WCADLPAVLAEARRVLRP 149
>sp|E4QJB8|BIOC_METS6 Malonyl-CoA O-methyltransferase BioC OS=Methylovorus sp. (strain
MP688) GN=bioC PE=3 SV=1
Length = 296
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 50 IFDRHLKRKQRDRAAWLTRPNDSFVDAVAENLLDRLEDCRKTFPTAL----CLGGSLEAV 105
+ D+ R+ DRAA V E +L+RL D K P A+ C G A
Sbjct: 7 LIDKARVRRSFDRAAGTYDAAALLQREVRERMLERL-DLVKLAPQAVLDAGCGTGHASAA 65
Query: 106 RRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCF-------VVGDEEFLPLK 158
L R ++I +D + MLK A+ ++ F V D E LPL
Sbjct: 66 ---LSARYRQSQVISLDIAMGMLKKTMAAR-----SLVQRLFGFDRRHAVCADIERLPLA 117
Query: 159 ESSLDLAISCLGLHWTNDLPGAMIQVSIFLLPD 191
+S+DL S + + W NDL A ++ L P+
Sbjct: 118 AASIDLVWSNMAIQWCNDLDQAFGEIQRVLKPE 150
>sp|D2T333|BIOC_ERWP6 Malonyl-CoA O-methyltransferase BioC OS=Erwinia pyrifoliae (strain
DSM 12163 / CIP 106111 / Ep16/96) GN=bioC PE=3 SV=1
Length = 262
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 110 RGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCL 169
R R G + +D S ML Q A + C++ GD E LP ++S D S L
Sbjct: 70 RWRAGGHWVTALDLSEKML-------QHARENQAADCYLPGDIEALPFADASFDRCWSNL 122
Query: 170 GLHWTNDLPGAM 181
+ W + LP A+
Sbjct: 123 AVQWCSSLPLAL 134
>sp|A1WVM4|BIOC_HALHL Malonyl-CoA O-methyltransferase BioC OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=bioC PE=3 SV=1
Length = 295
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 77 VAENLLDRLEDCRKTFPTALCLG-GSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQ 135
VA+ LL+RLE R L LG G+ A R LLR R ++ +D + ML+ +
Sbjct: 35 VADRLLERLEPVRVHPRRVLDLGAGTGYATRGLLR-RYRKAEVHAVDLAPAMLQRVR--- 90
Query: 136 QDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLPD 191
+ A C V D LP + S +L S L L W DLP A+ ++ P+
Sbjct: 91 RRAPWLRRPRC-VCADLHALPYPDDSFELVFSNLALQWAEDLPTALRELQRVTAPE 145
>sp|D9SJ16|BIOC_GALCS Malonyl-CoA O-methyltransferase BioC OS=Gallionella
capsiferriformans (strain ES-2) GN=bioC PE=3 SV=1
Length = 290
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Query: 50 IFDRHLKRKQRDRAAWLTRPNDSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLL 109
+ D+ R+ RAA + V +L+RLE + L G R L
Sbjct: 5 VIDKKAMRQAFSRAAEGYDASAVLQREVCMRMLERLEYIKLQPARLLDAGSGTGWGGRQL 64
Query: 110 RGRGGIEKLIMMDTSYDMLKLCKDAQQDAHN--DNIETCFVVGDEEFLPLKESSLDLAIS 167
+ ++I +D + ML+ K V D E LPL +SLD+ S
Sbjct: 65 AEKYPAAQVISLDIAIGMLQTSKSRSSWWQKLFGGCRQLPVCADVEALPLAANSLDMVWS 124
Query: 168 CLGLHWTNDLPGAMIQV 184
L + W NDLP +++
Sbjct: 125 NLAVQWCNDLPATFVEL 141
>sp|Q2SBD7|BIOC_HAHCH Malonyl-CoA O-methyltransferase BioC OS=Hahella chejuensis (strain
KCTC 2396) GN=bioC PE=3 SV=1
Length = 279
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 138 AHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLP 190
AH+DN+ + V D E LP+ +S DL S + + W +D + S L P
Sbjct: 104 AHHDNVAEIWAVADMESLPVANASQDLVFSNMAMQWLDDPRAWFAEASRVLRP 156
>sp|Q7CH67|BIOC_YERPE Malonyl-CoA O-methyltransferase BioC OS=Yersinia pestis GN=bioC
PE=3 SV=1
Length = 267
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 116 EKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTN 175
+++I +D + ML + QQ +D +++GD E +PL + S+D+ S L + W +
Sbjct: 81 KRVIALDLAAGMLDYAR--QQQVADD-----YLLGDIEHIPLPDQSVDICFSNLAVQWCS 133
Query: 176 DLPGAM 181
DL A+
Sbjct: 134 DLGAAL 139
>sp|Q9ZD84|Y459_RICPR Putative methyltransferase RP459 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP459 PE=3 SV=1
Length = 226
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 151 DEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLPD 191
D+E L ++ S DL I LGLHW ND+ + + FL D
Sbjct: 54 DDENLEFQKDSFDLIIYSLGLHWINDVQRFLYNIRTFLKSD 94
>sp|B3PI89|BIOHC_CELJU Biotin biosynthesis bifunctional protein BioHC OS=Cellvibrio
japonicus (strain Ueda107) GN=bioC PE=3 SV=1
Length = 502
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 117 KLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTND 176
++I +D + ML + A + +V GD E LP +SS+D S L + W
Sbjct: 311 EVIALDIAQGMLDFARQQHPQAAD------WVCGDAENLPFAQSSVDFIFSSLVIQWCAR 364
Query: 177 LPGAMIQVSIFLLP 190
+P M +++ L P
Sbjct: 365 VPQLMQELARVLKP 378
>sp|B4RC42|UBIE_PHEZH Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Phenylobacterium zucineum (strain HLK1) GN=ubiE PE=3
SV=1
Length = 252
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 112 RGGIE-KLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLG 170
RGG + K+ ++D + +M+ ++ E C+ VGD + LPL ++ D + G
Sbjct: 89 RGGDDAKVFVIDYNAEMIAAGRE-----RGFEPEICWTVGDAQRLPLPDACADAYVISFG 143
Query: 171 LHWTNDLPGAMIQVSIFLLP 190
+ D+P A+ + L P
Sbjct: 144 IRNVTDIPAALREARRVLKP 163
>sp|A6W0X8|BIOC_MARMS Malonyl-CoA O-methyltransferase BioC OS=Marinomonas sp. (strain
MWYL1) GN=bioC PE=3 SV=1
Length = 270
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 51 FDRHLKRKQRDRAAWLTRPNDSFVD---AVAENLLDRLEDCRKTFPTALCLGGSLEAVRR 107
+ R L K+ DRA ++ DS+ D V E LL L + L LG
Sbjct: 12 YKRQLA-KRFDRA---SQSYDSYADFQKVVLERLLAMLPLNQAD--VVLDLGTGTGQALG 65
Query: 108 LLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAIS 167
+L R + I +D S ML + + HN T +V D E LPL++ S DL S
Sbjct: 66 ILSERLNPKCNIALDLSLQMLAVASERFSSLHN----THYVCADAERLPLQDRSCDLVFS 121
Query: 168 CLGLHW 173
L + W
Sbjct: 122 SLAIQW 127
>sp|A0L3L9|BIOC_MAGSM Malonyl-CoA O-methyltransferase BioC OS=Magnetococcus sp. (strain
MC-1) GN=bioC PE=3 SV=1
Length = 270
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 77 VAENLLDRLEDCR-KTFPTALCLG-GSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDA 134
VA+ L +RL D P L +G G+ R L+R G + D S ML C+
Sbjct: 35 VADELAERLVDFPLPERPRVLEIGCGTGFLSRHLMRQWPG-GSFLFTDISAPMLVRCQSH 93
Query: 135 QQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFL 188
D + F+V D E ++ DL +S + + W DLPGA+ +S L
Sbjct: 94 LSDLPG---QRQFMVMDGEHCAVR-GPFDLVVSSMAMQWFGDLPGALQGLSSLL 143
>sp|A6L2V8|HIS8_BACV8 Histidinol-phosphate aminotransferase OS=Bacteroides vulgatus
(strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=hisC PE=3
SV=1
Length = 346
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 69 PNDSFVDAVAENLLDRLEDCRKTFPTALCLG-GSLEAVRRLLRG--RGGIEKLIMMDTSY 125
PN+ + D + L + + +K P + LG GS EA+ + R G++ ++ +D +Y
Sbjct: 44 PNNRYPDPMQRELKNMIAPIKKVDPDTIFLGNGSDEAIDLVYRAFCIPGVDNVVAIDPTY 103
Query: 126 DMLKLCKDAQQDAHNDNIETCFVVGDEEF 154
M ++C D +++E V+ DE +
Sbjct: 104 GMYQVCADV------NDVEYRKVLLDENY 126
>sp|O06898|BIOC_ESCVU Malonyl-CoA O-methyltransferase BioC OS=Escherichia vulneris
GN=bioC PE=3 SV=1
Length = 251
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 117 KLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTND 176
++ +D S ML+ + Q H +V D E LPL ++ DLA S L + W ND
Sbjct: 66 EVTALDLSLPMLRQAQSQQAAQH-------YVAADIEALPLADARFDLAWSNLAVQWCND 118
Query: 177 LPGAMIQVSIFLLP 190
L A+ + + P
Sbjct: 119 LGQALKSLHRVVRP 132
>sp|Q8ZQQ6|BIOC_SALTY Malonyl-CoA O-methyltransferase BioC OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=bioC PE=3 SV=1
Length = 251
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 90 KTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVV 149
+ F + L G + R R RG ++ +D S ML+ +D Q H +++
Sbjct: 41 RQFASVLDAGCGPGRMSRYWRERGS--EVTALDLSLPMLQQARDRQAAHH-------YLL 91
Query: 150 GDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIFLLP 190
D E +P DLA S L + W DL A+ ++ + P
Sbjct: 92 ADIEAIPHDAEVFDLAWSNLAVQWCGDLRDALSELYRVVRP 132
>sp|D1ZA70|ARO1_SORMK Pentafunctional AROM polypeptide OS=Sordaria macrospora (strain
ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
GN=SMAC_02366 PE=3 SV=1
Length = 1563
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 82 LDRLEDCRKTFPTAL---CLGGSLE--AVRRLL---RGRGGIEKLIMMDTSYDMLKLCKD 133
LD LED K PT C GG +E A R+LL GGI L+ DT + L +D
Sbjct: 918 LDLLEDVIKNNPTGHIFSCGGGIVESEAARKLLISYSQNGGIVLLVHRDTDQVVEYLMRD 977
Query: 134 AQQDAHNDNIETCF 147
+ A+++NI +
Sbjct: 978 KTRPAYSENIREVY 991
>sp|Q47C02|BIOC_DECAR Malonyl-CoA O-methyltransferase BioC OS=Dechloromonas aromatica
(strain RCB) GN=bioC PE=3 SV=1
Length = 262
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 146 CFVVGDEEFLPLKESSLDLAISCLGLHWTN 175
C V GD E LPL +SSLDL S L + W +
Sbjct: 96 CRVAGDLEHLPLADSSLDLYWSSLAVQWCD 125
>sp|C1D5S5|BIOC_LARHH Malonyl-CoA O-methyltransferase BioC OS=Laribacter hongkongensis
(strain HLHK9) GN=bioC PE=3 SV=1
Length = 297
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Query: 61 DRAAWLTRPNDSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIM 120
DRAA L R V + + RL+ R L G LLR R ++
Sbjct: 24 DRAAVLQR-------EVCDRMATRLDLIRHAPARVLDAGSGTGYGAGLLRARYPEAQVTE 76
Query: 121 MDTSYDMLKLCKDAQQDAHNDNIETCF------VVGDEEFLPLKESSLDLAISCLGLHWT 174
+D + ML+ +D Q + F V D E LPL SLD+ S L L W
Sbjct: 77 LDLAPSMLRASRDKQLP--QGRLRRLFARAPALVCADLEQLPLASGSLDMVWSSLALQWL 134
Query: 175 N 175
N
Sbjct: 135 N 135
>sp|Q609U9|BIOC_METCA Malonyl-CoA O-methyltransferase BioC OS=Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath) GN=bioC PE=3
SV=1
Length = 275
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 119 IMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLP 178
+ +D + ML+ + + A + VVGD E LPL + S+DL S + W L
Sbjct: 84 LALDIAEGMLRFLRSHRPGADGMGL----VVGDAEALPLADESVDLIFSNMAFQWCERLD 139
Query: 179 GAMIQVSIFLLP 190
A+ + L P
Sbjct: 140 RAISECCRVLRP 151
>sp|Q113K5|MTNA_TRIEI Methylthioribose-1-phosphate isomerase OS=Trichodesmium erythraeum
(strain IMS101) GN=mtnA PE=3 SV=1
Length = 353
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 81 LLDRLEDC----RKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQ 136
L +LE+ R+T PTA+ L ++E + ++ G T ++ + + +
Sbjct: 79 FLKQLEEIAVIFRRTRPTAVNLFWAIERILKVANKTNG--------TVKEIQEAVLETAK 130
Query: 137 DAHNDNIETCFVVGDE--EFLPLKESSLDLAISC 168
H +++ETC +GD E LP K L++ C
Sbjct: 131 KIHQEDLETCKNIGDRAVEILPTKPEKLNILTHC 164
>sp|P46209|USF_AQUPY Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1
Length = 231
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 74 VDAVAENLLDRLEDCRKTFP-----TALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDML 128
VDA+ + +D L++CR T P T C GG+L + G LI D S
Sbjct: 90 VDAIFKASVDFLKECRYTSPKKVGVTGFCCGGTLS-----MYFAGKFPDLI--DASVPFY 142
Query: 129 KLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIF 187
L + + DA N + F++ +++ + +D+A W N G ++V ++
Sbjct: 143 GLPQITKIDAENIKVPIFFILAEKDEFVNNDEVIDIAKKV----WKN---GVDVKVKVY 194
>sp|D8MPW4|BIOC_ERWBE Malonyl-CoA O-methyltransferase BioC OS=Erwinia billingiae (strain
Eb661) GN=bioC PE=3 SV=1
Length = 251
Score = 33.5 bits (75), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 112 RGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGL 171
R + +D S +ML A + C+ GD E LP ++S DL S L +
Sbjct: 61 RAAGNHVTALDLSAEMLV-------QAQALHTADCYQPGDIEALPFSDASFDLCWSNLAV 113
Query: 172 HWTNDLPGAMIQV 184
W +DL A+ ++
Sbjct: 114 QWCSDLSLALTEL 126
>sp|Q6D3C1|BIOC_ERWCT Malonyl-CoA O-methyltransferase BioC OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=bioC
PE=3 SV=1
Length = 253
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 118 LIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDL 177
+ +D S +ML ++ Q A + +E GD E LPL +S +D+ S L + W + L
Sbjct: 69 VTALDLSAEMLAYARE--QHAADRYLE-----GDIENLPLADSCVDICYSNLAVQWCDSL 121
Query: 178 PGAM 181
P A+
Sbjct: 122 PRAL 125
>sp|Q2Y9Y6|BIOC_NITMU Malonyl-CoA O-methyltransferase BioC OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=bioC PE=3 SV=1
Length = 307
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 147 FVVGDEEFLPLKESSLDLAISCLGLHWTNDL 177
+V GD E LPL++S L S L L W NDL
Sbjct: 122 YVAGDIEQLPLEDSCAGLVWSNLALQWCNDL 152
>sp|Q5LAZ9|HIS8_BACFN Histidinol-phosphate aminotransferase OS=Bacteroides fragilis
(strain ATCC 25285 / NCTC 9343) GN=hisC PE=3 SV=1
Length = 345
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 69 PNDSFVDAVAENLLDRLEDCRKTFPTALCLG-GSLEAVRRLLRG--RGGIEKLIMMDTSY 125
P++ + D + +L L +K P + LG GS EA+ + R G + ++ +D +Y
Sbjct: 44 PHNRYPDPMQRDLKLELSKIKKVAPAHIFLGNGSDEAIDLVFRAFCEPGRDNVVAIDPTY 103
Query: 126 DMLKLCKDA 134
M ++C D
Sbjct: 104 GMYQVCADV 112
>sp|Q64RE8|HIS8_BACFR Histidinol-phosphate aminotransferase OS=Bacteroides fragilis
(strain YCH46) GN=hisC PE=3 SV=1
Length = 345
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 69 PNDSFVDAVAENLLDRLEDCRKTFPTALCLG-GSLEAVRRLLRG--RGGIEKLIMMDTSY 125
P++ + D + +L L +K P + LG GS EA+ + R G + ++ +D +Y
Sbjct: 44 PHNRYPDPMQRDLKLELSKIKKVAPAHIFLGNGSDEAIDLVFRAFCEPGRDNVVAIDPTY 103
Query: 126 DMLKLCKDA 134
M ++C D
Sbjct: 104 GMYQVCADV 112
>sp|O67802|DLHH_AQUAE Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain
VF5) GN=aq_1997 PE=3 SV=1
Length = 231
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 74 VDAVAENLLDRLEDCRKTFP-----TALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDML 128
VD + + ++ +++CR T+P T C GG+L M+D S
Sbjct: 90 VDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPE-------MVDASLPFY 142
Query: 129 KLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQVSIF 187
L + Q +A N + F++ +++ + +D+A + W N G +QV +F
Sbjct: 143 GLPQLTQINAENIKVPIFFILAEKDEFVNNDEVIDIAKTV----WKN---GVDVQVKVF 194
>sp|Q8X071|ARO1_NEUCR Pentafunctional AROM polypeptide OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=aro-1 PE=3 SV=1
Length = 1563
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 82 LDRLEDCRKTFPTAL---CLGGSLE--AVRRLL---RGRGGIEKLIMMDTSYDMLKLCKD 133
L+ LED K PT C GG +E A R++L GGI L+ DT + L +D
Sbjct: 918 LELLEDVIKNNPTGHIFSCGGGIVETEAARKMLLSYSQNGGIVLLVHRDTDQVVEYLMRD 977
Query: 134 AQQDAHNDNIETCF 147
+ A+++NI +
Sbjct: 978 KSRPAYSENIREVY 991
>sp|E3G327|BIOC_ENTCS Malonyl-CoA O-methyltransferase BioC OS=Enterobacter cloacae
(strain SCF1) GN=bioC PE=3 SV=1
Length = 251
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 15/88 (17%)
Query: 111 GRGGIEK--------LIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSL 162
G GGI + + +D S ML + Q H +V D E +PL +
Sbjct: 52 GPGGISRYWRDNGCEVTALDLSAQMLAEARRQQAADH-------YVQADIEAIPLASAQF 104
Query: 163 DLAISCLGLHWTNDLPGAMIQVSIFLLP 190
DL S L + W + L A+ ++ L P
Sbjct: 105 DLVWSNLAVQWCDSLQDAVQELYRMLRP 132
>sp|Q83E64|BIOC1_COXBU Malonyl-CoA O-methyltransferase BioC 1 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=bioC1 PE=3 SV=1
Length = 282
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 58 KQRDRAAWLTRPNDSFV-DAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIE 116
K+ AA T N V A+A+ LL+RL+ R + +G + L R
Sbjct: 14 KKALHAAARTYDNVGMVPKAIADRLLERLDFIRLNPLCVVDVGARTGYATQQLEERYREA 73
Query: 117 KLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTND 176
++ +D S +LK + +VG+ LP + S+DL S L W++D
Sbjct: 74 IVVGLDFSVAILKAAS------------SKMMVGEYTALPFADRSVDLIFSNLAFQWSSD 121
Query: 177 LPGAMIQVSIFLLP 190
L + + L P
Sbjct: 122 LQQTLQECHRVLKP 135
>sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein
OS=Dictyostelium discoideum GN=strap PE=3 SV=1
Length = 293
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 31/159 (19%)
Query: 22 EPYALVPSGSFCTDNGFETTSNGSSRVSIFDRHLKRKQRDRAAWLTRPNDSFVDAVAENL 81
E ++V + F +N T + IFD L RPND +
Sbjct: 95 EHQSIVKTADFSNNNSRVVTGGSEKILRIFD-------------LERPNDPLL------- 134
Query: 82 LDRLEDCRKTFPTA--------LCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKD 133
++ T TA + L G L+ V R+ R G + + +S ++ KD
Sbjct: 135 --QISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSGTQVSLCAKSSITSMEFSKD 192
Query: 134 AQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLH 172
+ E F + F PLK SL ++C LH
Sbjct: 193 RRFLVTTAGNEVTFWDA-QSFYPLKVYSLPFDVNCASLH 230
>sp|P12999|BIOC_ECOLI Malonyl-CoA O-methyltransferase BioC OS=Escherichia coli (strain
K12) GN=bioC PE=1 SV=2
Length = 251
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 117 KLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTND 176
++ +D S ML + Q+DA + ++ GD E LPL ++ DLA S L + W +
Sbjct: 66 QVTALDLSPPMLVQAR--QKDAADH-----YLAGDIESLPLATATFDLAWSNLAVQWCGN 118
Query: 177 LPGAM 181
L A+
Sbjct: 119 LSTAL 123
>sp|Q58648|Y1252_METJA Uncharacterized protein MJ1252 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1252 PE=4 SV=1
Length = 251
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 121 MDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGA 180
+D S +M K+ K+ VV + EFLP K S D AIS G +L A
Sbjct: 79 LDISLEMAKIAKNKTNKP--------VVVANAEFLPFKNKSFDKAISFFGALNHCNLKRA 130
Query: 181 MIQVSIFLLPD 191
+ +V+ L D
Sbjct: 131 LREVNRVLKDD 141
>sp|B1XJK0|MTNA_SYNP2 Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=mtnA PE=3 SV=2
Length = 346
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 81 LLDRLE----DCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQ 136
L++LE R+T PTA+ L +++ V ++G G ++ L + +
Sbjct: 76 FLEKLEAIAATLRQTRPTAVNLFWAIDRVMATVQGATG--------NIPELQNLILNTAK 127
Query: 137 DAHNDNIETCFVVGDEEFLPLKESSLDLAI 166
HN+++ TC +GD+ L E+ L I
Sbjct: 128 AIHNEDLATCQAIGDQGLAVLPETPEKLTI 157
>sp|B3EJ06|SECA_CHLPB Protein translocase subunit SecA OS=Chlorobium phaeobacteroides
(strain BS1) GN=secA PE=3 SV=1
Length = 1029
Score = 30.8 bits (68), Expect = 6.1, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 104 AVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLD 163
A+ R RG+ +LI M + M KL + A+ + DN V DE + + E S
Sbjct: 334 ALLRAKRGQPKNTRLIKMLSQTGMAKLMQSAENEYLKDNSRRMHEVDDELYFSIDEKSNA 393
Query: 164 LAISCLGLHWTNDLPGAMIQVSIFLLPD 191
+ ++ G + + L +FL+PD
Sbjct: 394 IDLTDKGRDFLSKLSNQ--DSDLFLVPD 419
>sp|Q1QYX8|GCP_CHRSD Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=gcp PE=3 SV=1
Length = 343
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 14 LRRRRANNEPYALVPSGSFCTDNGFETTSNGSSRVSIFDR 53
L R A + A P G FCTDNG G+ R+ +R
Sbjct: 283 LDRETAKRQAQAFYPRGRFCTDNGAMIAYVGAQRLLAGER 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,204,228
Number of Sequences: 539616
Number of extensions: 2658786
Number of successful extensions: 6575
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6536
Number of HSP's gapped (non-prelim): 52
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)