Query 029556
Match_columns 191
No_of_seqs 174 out of 1333
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 00:31:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.7 2.6E-16 8.8E-21 142.3 10.5 89 43-135 370-476 (496)
2 4hw6_A Hypothetical protein, I 99.6 1.1E-15 3.8E-20 135.3 10.6 87 43-133 333-432 (433)
3 3hrp_A Uncharacterized protein 99.6 2.6E-14 9E-19 125.1 15.7 86 44-133 322-409 (409)
4 3hrp_A Uncharacterized protein 99.5 3.7E-13 1.3E-17 117.8 18.8 95 45-143 266-363 (409)
5 3kya_A Putative phosphatase; s 99.5 2.1E-14 7E-19 129.9 11.0 97 45-143 310-418 (496)
6 3tc9_A Hypothetical hydrolase; 99.5 1.9E-14 6.5E-19 127.1 9.7 87 43-133 330-429 (430)
7 4hw6_A Hypothetical protein, I 99.4 3.8E-12 1.3E-16 112.6 17.2 96 45-142 273-381 (433)
8 3tc9_A Hypothetical hydrolase; 99.3 1.6E-11 5.6E-16 108.3 13.0 96 45-143 270-379 (430)
9 3fvz_A Peptidyl-glycine alpha- 99.2 1.8E-10 6E-15 96.6 12.2 83 44-133 142-226 (329)
10 3fvz_A Peptidyl-glycine alpha- 99.1 1.1E-09 3.8E-14 91.7 14.5 84 42-135 88-176 (329)
11 3v64_C Agrin; beta propeller, 99.0 3.6E-09 1.2E-13 90.6 13.5 81 44-140 158-240 (349)
12 1ijq_A LDL receptor, low-densi 99.0 1.1E-08 3.9E-13 86.0 15.3 82 44-141 119-202 (316)
13 1ijq_A LDL receptor, low-densi 99.0 1.6E-08 5.4E-13 85.1 16.0 91 29-139 17-113 (316)
14 3m0c_C LDL receptor, low-densi 99.0 3.1E-08 1.1E-12 93.9 18.9 81 44-141 513-596 (791)
15 3v65_B Low-density lipoprotein 99.0 4.7E-09 1.6E-13 91.0 12.3 80 44-140 201-283 (386)
16 3sov_A LRP-6, low-density lipo 99.0 2.2E-08 7.4E-13 84.9 16.0 75 44-136 165-240 (318)
17 3v64_C Agrin; beta propeller, 99.0 2.1E-08 7.3E-13 85.7 16.0 91 28-137 59-150 (349)
18 3sov_A LRP-6, low-density lipo 99.0 7.9E-09 2.7E-13 87.6 13.2 80 44-140 121-203 (318)
19 3p5b_L Low density lipoprotein 99.0 1.2E-08 4E-13 89.0 14.0 81 44-141 201-284 (400)
20 3v65_B Low-density lipoprotein 98.9 2.1E-08 7.1E-13 86.9 15.3 88 30-137 104-193 (386)
21 1q7f_A NHL, brain tumor CG1071 98.9 3.4E-08 1.2E-12 79.9 15.1 76 44-135 163-239 (286)
22 3p5b_L Low density lipoprotein 98.9 2.1E-08 7.3E-13 87.4 14.6 93 30-138 100-194 (400)
23 1npe_A Nidogen, entactin; glyc 98.9 9.1E-08 3.1E-12 77.4 16.9 77 45-138 79-159 (267)
24 3g4e_A Regucalcin; six bladed 98.9 3.2E-08 1.1E-12 81.6 13.8 106 45-165 149-260 (297)
25 1npe_A Nidogen, entactin; glyc 98.9 7.2E-08 2.5E-12 78.0 15.7 80 44-144 166-246 (267)
26 3s94_A LRP-6, low-density lipo 98.9 6E-08 2.1E-12 89.4 16.7 81 44-141 434-517 (619)
27 2p4o_A Hypothetical protein; p 98.9 8.7E-08 3E-12 79.5 15.8 107 44-167 168-278 (306)
28 4a0p_A LRP6, LRP-6, low-densit 98.8 5.9E-08 2E-12 89.6 14.9 79 45-140 80-161 (628)
29 1q7f_A NHL, brain tumor CG1071 98.8 4.3E-07 1.5E-11 73.4 18.3 76 44-135 120-195 (286)
30 2fp8_A Strictosidine synthase; 98.8 5E-08 1.7E-12 81.2 12.8 84 45-146 185-278 (322)
31 3m0c_C LDL receptor, low-densi 98.8 8.9E-08 3E-12 90.8 15.9 95 30-140 412-508 (791)
32 3s94_A LRP-6, low-density lipo 98.8 1.3E-07 4.4E-12 87.2 15.9 78 44-138 391-471 (619)
33 4a0p_A LRP6, LRP-6, low-densit 98.8 3.4E-07 1.2E-11 84.5 17.6 93 29-140 418-514 (628)
34 3sre_A PON1, serum paraoxonase 98.7 3.2E-08 1.1E-12 85.8 9.1 104 21-145 200-309 (355)
35 1rwi_B Serine/threonine-protei 98.7 1.8E-07 6.1E-12 74.5 12.7 74 45-135 150-223 (270)
36 2p4o_A Hypothetical protein; p 98.6 2.7E-07 9.1E-12 76.6 11.7 78 45-141 32-111 (306)
37 1n7d_A LDL receptor, low-densi 98.6 8.8E-08 3E-12 89.4 9.0 81 44-140 495-577 (699)
38 2fp8_A Strictosidine synthase; 98.6 1.1E-06 3.9E-11 72.9 14.6 73 44-134 125-216 (322)
39 1rwi_B Serine/threonine-protei 98.6 2.6E-07 8.9E-12 73.6 10.2 73 45-134 192-264 (270)
40 3e5z_A Putative gluconolactona 98.6 5.8E-06 2E-10 67.2 17.4 99 45-165 172-275 (296)
41 1n7d_A LDL receptor, low-densi 98.5 2E-07 6.8E-12 87.0 9.3 76 44-135 539-615 (699)
42 2qc5_A Streptogramin B lactona 98.5 8.9E-06 3.1E-10 65.0 16.7 73 44-133 145-217 (300)
43 2qe8_A Uncharacterized protein 98.5 8.4E-07 2.9E-11 74.7 10.9 113 45-166 195-309 (343)
44 2qc5_A Streptogramin B lactona 98.5 3.7E-06 1.3E-10 67.2 14.1 74 44-134 187-260 (300)
45 3dr2_A Exported gluconolactona 98.4 8.2E-06 2.8E-10 67.1 15.2 104 18-139 61-183 (305)
46 2ism_A Putative oxidoreductase 98.4 3.4E-06 1.1E-10 72.1 12.8 88 29-134 18-114 (352)
47 3a9g_A Putative uncharacterize 98.4 2.8E-06 9.6E-11 72.9 11.3 92 26-135 13-115 (354)
48 3e5z_A Putative gluconolactona 98.4 5.4E-06 1.9E-10 67.3 12.2 90 27-137 13-102 (296)
49 2z2n_A Virginiamycin B lyase; 98.3 7E-05 2.4E-09 59.6 18.4 72 44-132 140-211 (299)
50 2z2n_A Virginiamycin B lyase; 98.3 1.4E-05 4.9E-10 63.7 13.9 73 44-133 182-254 (299)
51 2ghs_A AGR_C_1268P; regucalcin 98.3 1.6E-05 5.3E-10 66.5 13.1 87 45-146 179-269 (326)
52 3dsm_A Uncharacterized protein 98.2 8.1E-05 2.8E-09 62.1 17.3 105 45-167 84-191 (328)
53 3dr2_A Exported gluconolactona 98.2 2.1E-05 7E-10 64.7 12.9 84 30-134 33-116 (305)
54 2qe8_A Uncharacterized protein 98.2 2.1E-05 7.2E-10 66.0 13.2 82 43-135 65-155 (343)
55 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 3E-05 1E-09 62.6 13.2 77 45-133 172-255 (314)
56 2p9w_A MAL S 1 allergenic prot 98.1 2.9E-05 9.9E-10 66.8 11.8 120 14-135 25-169 (334)
57 2ism_A Putative oxidoreductase 98.1 0.00016 5.4E-09 61.6 16.0 79 45-134 75-178 (352)
58 2dg1_A DRP35, lactonase; beta 98.1 4.4E-05 1.5E-09 62.6 11.9 90 45-146 182-272 (333)
59 2g8s_A Glucose/sorbosone dehyd 98.1 1.4E-05 4.7E-10 68.4 9.0 93 26-134 2-107 (353)
60 1cru_A Protein (soluble quinop 98.0 2.8E-05 9.6E-10 69.0 11.0 95 27-133 12-122 (454)
61 2dg1_A DRP35, lactonase; beta 98.0 0.00036 1.2E-08 57.1 16.0 87 31-137 34-124 (333)
62 3dsm_A Uncharacterized protein 98.0 0.00045 1.6E-08 57.5 16.8 71 46-135 132-213 (328)
63 3a9g_A Putative uncharacterize 97.9 0.00058 2E-08 58.3 16.8 80 45-135 73-179 (354)
64 3qqz_A Putative uncharacterize 97.9 0.0001 3.4E-09 61.0 11.2 82 44-134 172-253 (255)
65 3hfq_A Uncharacterized protein 97.8 0.00068 2.3E-08 55.7 15.3 86 44-133 85-170 (347)
66 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 7.4E-05 2.5E-09 60.3 9.0 73 45-134 226-299 (314)
67 3vgz_A Uncharacterized protein 97.8 0.0017 5.7E-08 52.8 17.0 81 45-145 231-312 (353)
68 3g4e_A Regucalcin; six bladed 97.8 0.00028 9.7E-09 57.6 12.3 76 45-140 13-88 (297)
69 3hfq_A Uncharacterized protein 97.8 0.00026 9E-09 58.2 12.1 94 45-151 240-337 (347)
70 3vgz_A Uncharacterized protein 97.8 0.00056 1.9E-08 55.6 13.4 74 45-135 41-121 (353)
71 3no2_A Uncharacterized protein 97.7 0.00038 1.3E-08 57.1 12.0 79 45-134 165-253 (276)
72 3das_A Putative oxidoreductase 97.7 0.00028 9.7E-09 60.7 11.3 92 29-134 19-116 (347)
73 3sre_A PON1, serum paraoxonase 97.7 0.00031 1E-08 60.7 11.2 105 39-166 160-285 (355)
74 4a9v_A PHOX; hydrolase, beta-p 97.7 0.00037 1.3E-08 63.9 12.0 96 44-139 383-523 (592)
75 2p9w_A MAL S 1 allergenic prot 97.7 0.00015 5E-09 62.4 8.7 74 46-133 138-214 (334)
76 3no2_A Uncharacterized protein 97.5 0.0032 1.1E-07 51.4 14.1 71 45-134 125-195 (276)
77 3scy_A Hypothetical bacterial 97.5 0.0064 2.2E-07 50.1 15.9 78 45-135 259-340 (361)
78 2g8s_A Glucose/sorbosone dehyd 97.5 0.00071 2.4E-08 57.6 10.2 74 46-132 272-352 (353)
79 3qqz_A Putative uncharacterize 97.5 0.0066 2.3E-07 49.9 15.6 84 45-144 27-111 (255)
80 2iwa_A Glutamine cyclotransfer 97.4 0.0037 1.3E-07 51.8 14.0 87 45-150 21-110 (266)
81 3u4y_A Uncharacterized protein 97.4 0.0083 2.8E-07 48.4 15.6 97 45-153 128-229 (331)
82 1cru_A Protein (soluble quinop 97.4 0.0041 1.4E-07 55.0 14.2 65 46-121 78-161 (454)
83 3scy_A Hypothetical bacterial 97.3 0.0027 9.3E-08 52.4 11.8 90 46-143 156-251 (361)
84 3u4y_A Uncharacterized protein 97.3 0.0031 1.1E-07 51.0 11.5 80 45-142 176-260 (331)
85 3zwu_A Alkaline phosphatase PH 97.2 0.0045 1.5E-07 56.9 13.1 92 44-135 383-519 (592)
86 3das_A Putative oxidoreductase 97.2 0.018 6.3E-07 49.4 15.6 81 45-135 80-184 (347)
87 3amr_A 3-phytase; beta-propell 97.1 0.0068 2.3E-07 52.4 12.8 77 44-133 179-262 (355)
88 1pby_B Quinohemoprotein amine 97.1 0.025 8.5E-07 45.1 15.4 79 46-135 35-125 (337)
89 1ri6_A Putative isomerase YBHE 97.1 0.011 3.7E-07 47.4 13.0 88 45-145 231-321 (343)
90 3c75_H MADH, methylamine dehyd 97.1 0.0071 2.4E-07 53.3 12.6 88 45-146 119-219 (426)
91 1l0q_A Surface layer protein; 97.1 0.036 1.2E-06 45.7 16.4 98 17-135 5-106 (391)
92 2ghs_A AGR_C_1268P; regucalcin 97.1 0.0065 2.2E-07 50.3 11.8 83 33-137 39-121 (326)
93 1jof_A Carboxy-CIS,CIS-muconat 96.9 0.0077 2.6E-07 50.2 10.6 77 45-132 145-222 (365)
94 3nok_A Glutaminyl cyclase; bet 96.9 0.03 1E-06 46.5 14.0 68 46-135 97-165 (268)
95 2iwa_A Glutamine cyclotransfer 96.9 0.022 7.4E-07 47.1 13.0 82 47-145 107-190 (266)
96 3nol_A Glutamine cyclotransfer 96.9 0.012 4.1E-07 48.8 11.4 93 46-146 88-211 (262)
97 3mbr_X Glutamine cyclotransfer 96.8 0.1 3.5E-06 42.6 16.7 119 46-182 106-230 (243)
98 1l0q_A Surface layer protein; 96.8 0.097 3.3E-06 43.0 16.8 74 45-135 74-148 (391)
99 1jmx_B Amine dehydrogenase; ox 96.7 0.027 9.3E-07 45.2 12.5 81 47-145 2-83 (349)
100 1jof_A Carboxy-CIS,CIS-muconat 96.7 0.0083 2.8E-07 50.0 9.6 93 46-151 255-358 (365)
101 1mda_H Methylamine dehydrogena 96.6 0.022 7.6E-07 49.0 11.8 78 45-134 66-158 (368)
102 3nok_A Glutaminyl cyclase; bet 96.6 0.012 4.3E-07 48.8 9.5 83 46-145 137-219 (268)
103 3sjl_D Methylamine dehydrogena 96.6 0.12 4E-06 45.0 16.2 89 45-147 79-180 (386)
104 2oiz_A Aromatic amine dehydrog 96.6 0.029 1E-06 47.2 12.1 85 46-145 52-150 (361)
105 2mad_H Methylamine dehydrogena 96.5 0.078 2.7E-06 45.1 14.4 88 45-146 67-167 (373)
106 1jmx_B Amine dehydrogenase; ox 96.5 0.1 3.5E-06 41.8 14.1 79 46-134 44-134 (349)
107 3mbr_X Glutamine cyclotransfer 96.4 0.049 1.7E-06 44.5 12.1 76 46-145 66-142 (243)
108 1pby_B Quinohemoprotein amine 96.4 0.053 1.8E-06 43.2 12.0 79 45-146 241-320 (337)
109 2mad_H Methylamine dehydrogena 96.3 0.051 1.7E-06 46.3 12.1 77 46-142 265-356 (373)
110 1ri6_A Putative isomerase YBHE 96.3 0.034 1.2E-06 44.4 10.4 76 45-133 38-114 (343)
111 3nol_A Glutamine cyclotransfer 96.1 0.059 2E-06 44.6 11.1 81 48-148 46-128 (262)
112 1nir_A Nitrite reductase; hemo 96.1 0.17 5.9E-06 45.1 15.0 73 46-135 180-258 (543)
113 3bws_A Protein LP49; two-domai 96.1 0.28 9.5E-06 40.8 15.3 74 45-135 212-293 (433)
114 4a9v_A PHOX; hydrolase, beta-p 96.0 0.022 7.4E-07 52.3 8.3 62 44-121 475-549 (592)
115 1fwx_A Nitrous oxide reductase 95.9 0.023 7.7E-07 52.3 8.4 91 45-146 277-381 (595)
116 3c75_H MADH, methylamine dehyd 95.9 0.035 1.2E-06 48.8 9.3 78 46-143 317-409 (426)
117 1qks_A Cytochrome CD1 nitrite 95.9 0.26 9.1E-06 44.5 15.3 74 45-135 197-276 (567)
118 2oiz_A Aromatic amine dehydrog 95.8 0.13 4.5E-06 43.1 12.3 77 46-143 252-343 (361)
119 3bws_A Protein LP49; two-domai 95.8 0.2 6.9E-06 41.7 13.3 73 46-135 304-391 (433)
120 2ece_A 462AA long hypothetical 95.6 0.15 5.3E-06 45.4 12.1 77 45-121 321-399 (462)
121 3q6k_A 43.2 kDa salivary prote 95.4 0.051 1.7E-06 47.3 8.2 63 48-122 278-342 (381)
122 3q6k_A 43.2 kDa salivary prote 95.3 0.28 9.5E-06 42.6 12.6 87 43-140 85-196 (381)
123 3sjl_D Methylamine dehydrogena 95.3 0.11 3.6E-06 45.2 9.9 82 46-146 278-373 (386)
124 1mda_H Methylamine dehydrogena 95.3 0.084 2.9E-06 45.3 9.1 81 46-146 262-356 (368)
125 1nir_A Nitrite reductase; hemo 95.0 0.4 1.4E-05 42.7 13.1 75 46-135 281-356 (543)
126 1tl2_A L10, protein (tachylect 94.6 0.15 5.2E-06 41.5 8.3 79 33-134 31-116 (236)
127 2wg3_C Hedgehog-interacting pr 94.4 0.11 3.8E-06 46.0 7.8 93 30-133 2-114 (463)
128 3s25_A Hypothetical 7-bladed b 94.3 0.3 1E-05 40.5 9.8 67 51-137 151-219 (302)
129 3amr_A 3-phytase; beta-propell 94.1 0.39 1.3E-05 41.4 10.2 76 45-133 128-209 (355)
130 2ece_A 462AA long hypothetical 92.7 2.6 9E-05 37.4 13.5 98 45-146 251-365 (462)
131 1qks_A Cytochrome CD1 nitrite 92.2 1.2 4.2E-05 40.1 11.1 73 55-145 165-238 (567)
132 2wg3_C Hedgehog-interacting pr 91.1 0.9 3.1E-05 40.1 8.7 81 45-132 276-371 (463)
133 3hxj_A Pyrrolo-quinoline quino 90.7 5.1 0.00017 31.6 15.7 66 47-134 179-244 (330)
134 3hxj_A Pyrrolo-quinoline quino 90.2 5.7 0.00019 31.3 15.4 69 46-134 216-284 (330)
135 1fwx_A Nitrous oxide reductase 89.4 1.8 6.1E-05 39.7 9.4 91 46-154 87-204 (595)
136 3s25_A Hypothetical 7-bladed b 89.2 0.77 2.6E-05 38.1 6.4 64 51-135 110-177 (302)
137 4e54_B DNA damage-binding prot 84.4 17 0.00057 30.3 12.8 75 46-134 166-240 (435)
138 3v9f_A Two-component system se 83.8 14 0.00049 33.7 12.4 74 46-134 451-524 (781)
139 3v9f_A Two-component system se 83.7 12 0.00042 34.1 11.9 75 45-135 495-569 (781)
140 1gxr_A ESG1, transducin-like e 83.5 14 0.00047 28.6 14.1 73 45-135 184-256 (337)
141 2hqs_A Protein TOLB; TOLB, PAL 82.4 21 0.0007 29.9 12.4 38 46-86 180-219 (415)
142 4a2l_A BT_4663, two-component 81.7 11 0.00037 34.6 10.7 88 31-134 28-116 (795)
143 3ott_A Two-component system se 81.3 14 0.00048 33.6 11.2 74 46-135 473-546 (758)
144 1tl2_A L10, protein (tachylect 80.9 8.5 0.00029 31.1 8.5 65 48-131 91-160 (236)
145 3zwu_A Alkaline phosphatase PH 80.7 6.6 0.00023 35.8 8.7 61 44-120 475-548 (592)
146 1gxr_A ESG1, transducin-like e 77.5 22 0.00076 27.4 15.5 73 45-135 225-297 (337)
147 2hqs_A Protein TOLB; TOLB, PAL 76.2 11 0.00039 31.5 8.5 31 105-135 355-388 (415)
148 4a2l_A BT_4663, two-component 75.9 26 0.00087 32.0 11.3 72 46-135 544-615 (795)
149 2ymu_A WD-40 repeat protein; u 75.7 36 0.0012 28.9 14.8 71 46-135 469-540 (577)
150 3ei3_B DNA damage-binding prot 73.9 33 0.0011 27.5 14.1 75 45-133 119-193 (383)
151 4h5i_A Guanine nucleotide-exch 72.7 34 0.0012 27.8 10.4 70 47-133 272-342 (365)
152 2ojh_A Uncharacterized protein 70.7 26 0.00089 26.2 8.6 30 105-134 174-206 (297)
153 3k26_A Polycomb protein EED; W 69.9 37 0.0013 26.4 13.0 77 45-134 116-192 (366)
154 1r5m_A SIR4-interacting protei 69.8 40 0.0014 26.8 10.1 70 46-134 291-361 (425)
155 2pm9_A Protein WEB1, protein t 69.7 40 0.0014 27.0 10.1 72 46-134 264-337 (416)
156 3zwl_B Eukaryotic translation 69.1 38 0.0013 26.3 11.5 73 45-135 33-106 (369)
157 1erj_A Transcriptional repress 67.8 48 0.0017 27.0 11.4 70 47-134 126-196 (393)
158 1r5m_A SIR4-interacting protei 66.5 47 0.0016 26.4 10.2 29 45-74 331-359 (425)
159 2vdu_B TRNA (guanine-N(7)-)-me 66.4 43 0.0015 27.8 9.9 76 46-134 104-180 (450)
160 3sbq_A Nitrous-oxide reductase 65.8 25 0.00084 32.4 8.4 77 45-132 323-406 (638)
161 3ow8_A WD repeat-containing pr 64.7 51 0.0017 26.1 14.4 71 46-134 124-195 (321)
162 2xyi_A Probable histone-bindin 64.1 56 0.0019 27.0 10.1 75 46-134 233-309 (430)
163 2ymu_A WD-40 repeat protein; u 64.1 66 0.0023 27.2 15.3 70 46-134 428-498 (577)
164 3azo_A Aminopeptidase; POP fam 63.9 34 0.0012 30.0 9.0 73 47-134 190-274 (662)
165 3pe7_A Oligogalacturonate lyas 63.7 42 0.0014 26.8 9.0 76 49-135 242-330 (388)
166 4gqb_B Methylosome protein 50; 62.6 34 0.0012 27.8 8.3 29 46-74 216-244 (344)
167 3s9j_A Member of DUF4221 famil 62.3 61 0.0021 27.6 10.0 81 56-149 39-122 (369)
168 4g56_B MGC81050 protein; prote 59.7 27 0.00092 28.3 7.2 29 46-74 228-256 (357)
169 4a11_B DNA excision repair pro 58.3 57 0.0019 25.8 8.8 84 45-134 44-131 (408)
170 2oit_A Nucleoporin 214KDA; NH2 58.3 53 0.0018 27.7 9.0 71 46-133 151-222 (434)
171 3iz6_a 40S ribosomal protein R 57.5 75 0.0026 25.7 11.5 79 46-135 251-330 (380)
172 2xyi_A Probable histone-bindin 57.0 69 0.0024 26.4 9.4 76 46-134 323-410 (430)
173 2ecf_A Dipeptidyl peptidase IV 56.3 1.1E+02 0.0036 27.1 11.5 84 45-135 37-139 (741)
174 3o4h_A Acylamino-acid-releasin 56.0 24 0.00083 30.5 6.6 78 46-132 196-274 (582)
175 1k8k_C P40, ARP2/3 complex 41 55.2 73 0.0025 24.8 11.8 71 46-134 10-83 (372)
176 4a11_B DNA excision repair pro 54.6 77 0.0026 24.9 11.9 88 46-134 188-276 (408)
177 1yfq_A Cell cycle arrest prote 54.2 36 0.0012 26.4 6.9 73 45-135 12-90 (342)
178 2aq5_A Coronin-1A; WD40 repeat 53.7 86 0.0029 25.2 13.6 76 45-134 132-207 (402)
179 1vyh_C Platelet-activating fac 52.9 94 0.0032 25.5 10.4 68 46-131 340-408 (410)
180 4g56_B MGC81050 protein; prote 52.6 89 0.003 25.1 10.5 70 46-132 271-341 (357)
181 1sq9_A Antiviral protein SKI8; 52.5 85 0.0029 24.8 11.6 86 45-134 292-395 (397)
182 2aq5_A Coronin-1A; WD40 repeat 51.4 94 0.0032 25.0 13.1 75 46-135 178-255 (402)
183 3vu4_A KMHSV2; beta-propeller 50.3 96 0.0033 24.8 9.8 73 45-134 196-271 (355)
184 3mmy_A MRNA export factor; mRN 50.1 86 0.0029 24.2 13.8 75 45-135 40-118 (368)
185 3q7m_A Lipoprotein YFGL, BAMB; 49.8 98 0.0033 24.7 12.9 21 114-135 318-338 (376)
186 3frx_A Guanine nucleotide-bind 49.5 92 0.0032 24.4 9.4 70 46-133 67-137 (319)
187 1got_B GT-beta; complex (GTP-b 49.3 96 0.0033 24.5 16.1 75 46-135 228-302 (340)
188 4aez_A CDC20, WD repeat-contai 49.2 1E+02 0.0035 24.9 16.1 73 46-135 261-337 (401)
189 2ojh_A Uncharacterized protein 48.9 78 0.0027 23.4 11.6 72 46-134 43-119 (297)
190 2z3z_A Dipeptidyl aminopeptida 48.7 1E+02 0.0036 27.0 9.6 70 46-120 122-198 (706)
191 2ecf_A Dipeptidyl peptidase IV 47.7 1.3E+02 0.0044 26.5 10.1 70 46-120 153-226 (741)
192 2z3z_A Dipeptidyl aminopeptida 45.8 1.5E+02 0.0053 25.9 11.2 25 50-74 361-389 (706)
193 3mmy_A MRNA export factor; mRN 45.1 1E+02 0.0035 23.7 13.7 72 45-134 87-160 (368)
194 1pgu_A Actin interacting prote 44.8 1.4E+02 0.0048 25.1 13.2 77 46-135 208-284 (615)
195 1k32_A Tricorn protease; prote 43.4 1.7E+02 0.0057 27.5 10.6 80 46-135 54-144 (1045)
196 3vl1_A 26S proteasome regulato 42.7 1.3E+02 0.0044 24.0 13.5 72 45-134 140-212 (420)
197 4aow_A Guanine nucleotide-bind 42.4 1.1E+02 0.0038 23.3 11.5 76 45-134 39-117 (340)
198 1nr0_A Actin interacting prote 42.4 1.7E+02 0.0058 25.4 13.3 77 46-135 192-271 (611)
199 3i2n_A WD repeat-containing pr 41.8 1E+02 0.0035 23.7 7.7 30 45-74 19-51 (357)
200 1sq9_A Antiviral protein SKI8; 41.2 1.3E+02 0.0044 23.7 13.9 92 46-144 235-330 (397)
201 1nr0_A Actin interacting prote 40.7 1.1E+02 0.0039 26.6 8.5 29 105-133 493-521 (611)
202 2ynn_A Coatomer subunit beta'; 40.1 1.3E+02 0.0044 23.3 11.9 68 47-132 58-126 (304)
203 1k8k_C P40, ARP2/3 complex 41 39.2 1.3E+02 0.0045 23.2 12.6 73 45-132 53-125 (372)
204 3azo_A Aminopeptidase; POP fam 39.2 1.9E+02 0.0065 25.0 11.2 80 46-135 243-326 (662)
205 1pgu_A Actin interacting prote 39.2 1.7E+02 0.0059 24.5 12.4 75 45-135 489-573 (615)
206 4e54_B DNA damage-binding prot 38.8 1.6E+02 0.0055 24.1 10.5 74 46-134 121-196 (435)
207 3zwl_B Eukaryotic translation 38.6 1.3E+02 0.0045 23.0 16.2 70 46-133 76-150 (369)
208 3pe7_A Oligogalacturonate lyas 37.6 1.5E+02 0.0051 23.3 10.6 69 50-135 41-112 (388)
209 4ery_A WD repeat-containing pr 37.5 1.4E+02 0.0047 22.9 13.2 71 46-134 109-180 (312)
210 2pbi_B Guanine nucleotide-bind 37.2 1.6E+02 0.0054 23.5 12.1 67 46-130 286-353 (354)
211 3ei3_B DNA damage-binding prot 35.5 1.6E+02 0.0056 23.2 14.5 71 46-134 165-236 (383)
212 2ad6_A Methanol dehydrogenase 35.4 2.3E+02 0.0079 24.9 10.6 32 112-146 473-504 (571)
213 1yiq_A Quinohemoprotein alcoho 34.5 2.6E+02 0.0088 25.2 10.9 36 108-146 480-515 (689)
214 2gop_A Trilobed protease; beta 34.4 1.6E+02 0.0055 22.8 10.0 37 46-85 60-100 (347)
215 1kb0_A Quinohemoprotein alcoho 33.7 2.6E+02 0.009 25.1 10.3 31 113-146 487-517 (677)
216 1got_B GT-beta; complex (GTP-b 33.7 1.7E+02 0.0059 22.9 15.4 71 46-134 186-257 (340)
217 3ow8_A WD repeat-containing pr 33.4 1.7E+02 0.0059 22.9 16.8 72 46-135 208-280 (321)
218 1k32_A Tricorn protease; prote 33.2 1.8E+02 0.0061 27.3 9.0 38 45-86 379-416 (1045)
219 4ery_A WD repeat-containing pr 33.1 1.6E+02 0.0055 22.4 16.6 70 46-133 67-137 (312)
220 3dwl_C Actin-related protein 2 32.8 1.7E+02 0.0058 22.9 7.8 70 46-132 102-175 (377)
221 1kv9_A Type II quinohemoprotei 32.6 2.7E+02 0.0093 24.9 10.2 32 112-146 467-498 (668)
222 3o4h_A Acylamino-acid-releasin 32.3 1.5E+02 0.005 25.4 7.8 29 107-135 153-185 (582)
223 3c5m_A Oligogalacturonate lyas 31.9 1.8E+02 0.0063 22.7 11.4 76 47-141 240-336 (396)
224 3jrp_A Fusion protein of prote 30.7 1.8E+02 0.0063 22.3 12.0 77 46-133 208-286 (379)
225 3frx_A Guanine nucleotide-bind 30.6 1.9E+02 0.0065 22.5 13.1 28 105-132 288-315 (319)
226 3sfz_A APAF-1, apoptotic pepti 29.8 3.6E+02 0.012 25.4 13.5 72 46-135 617-689 (1249)
227 2xzm_R RACK1; ribosome, transl 29.3 2E+02 0.007 22.4 8.7 69 47-133 79-148 (343)
228 4aez_A CDC20, WD repeat-contai 28.5 2.3E+02 0.0078 22.7 14.5 76 46-135 305-381 (401)
229 3lrv_A PRE-mRNA-splicing facto 27.7 2.2E+02 0.0075 22.2 13.2 73 46-134 127-201 (343)
230 3k26_A Polycomb protein EED; W 27.0 2.1E+02 0.0072 21.8 9.7 71 46-133 71-146 (366)
231 1erj_A Transcriptional repress 26.9 2.5E+02 0.0084 22.6 13.3 70 46-133 167-237 (393)
232 2vdu_B TRNA (guanine-N(7)-)-me 26.4 2.6E+02 0.0091 22.8 10.5 73 46-135 197-272 (450)
233 4h5i_A Guanine nucleotide-exch 26.2 2.5E+02 0.0086 22.4 11.7 69 47-133 136-205 (365)
234 3ott_A Two-component system se 25.8 3.6E+02 0.012 24.1 10.0 73 46-132 374-446 (758)
235 3bx4_B Aggretin beta chain; to 25.3 22 0.00075 25.0 0.9 30 1-33 1-30 (146)
236 1z65_A PRPLP, prion-like prote 25.2 7.9 0.00027 21.0 -1.1 23 1-23 1-23 (30)
237 3iz6_a 40S ribosomal protein R 24.4 2.7E+02 0.0092 22.2 15.1 75 47-134 301-375 (380)
238 2pm9_A Protein WEB1, protein t 24.3 2.6E+02 0.0089 22.0 11.8 76 46-134 115-197 (416)
239 2pbi_B Guanine nucleotide-bind 23.6 2.7E+02 0.0094 22.0 15.3 74 46-135 242-316 (354)
240 2ysf_A E3 ubiquitin-protein li 23.1 1.1E+02 0.0037 17.1 3.8 25 102-126 7-31 (40)
241 3vu4_A KMHSV2; beta-propeller 22.9 2.8E+02 0.0097 21.9 12.7 86 46-132 242-334 (355)
242 4gqb_B Methylosome protein 50; 22.1 3E+02 0.01 21.9 15.7 74 46-133 171-245 (344)
243 3elq_A Arylsulfate sulfotransf 21.7 4.4E+02 0.015 23.7 12.7 77 45-126 355-455 (571)
244 3i2n_A WD repeat-containing pr 21.6 2.7E+02 0.0092 21.2 9.5 62 55-133 178-242 (357)
245 3dwl_C Actin-related protein 2 21.1 2.4E+02 0.0082 22.0 6.6 30 106-135 208-237 (377)
246 1z68_A Fibroblast activation p 20.8 1.4E+02 0.0047 26.3 5.5 28 47-74 62-97 (719)
247 1flg_A Protein (quinoprotein e 20.7 4.3E+02 0.015 23.2 9.2 32 112-146 495-526 (582)
248 3c5m_A Oligogalacturonate lyas 20.5 3E+02 0.01 21.3 10.0 36 47-85 38-75 (396)
249 2ynn_A Coatomer subunit beta'; 20.4 2.9E+02 0.01 21.1 12.4 71 46-134 15-86 (304)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=2.6e-16 Score=142.28 Aligned_cols=89 Identities=27% Similarity=0.359 Sum_probs=78.2
Q ss_pred CCCCee-eEEEec------CCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCc---------cCCCC-CCcccccCC
Q 029556 43 LEINPH-SVIDRP------GSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQ---------GYSDG-EPGSARFDK 105 (191)
Q Consensus 43 ~~~~P~-gIav~d------~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~---------G~~DG-~~~~a~f~~ 105 (191)
.++.|. ++++++ .+++|||||+.||||++++ ++|.+++++|.+.. |+.|| .+.+++|+.
T Consensus 370 ~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~----~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~ 445 (496)
T 3kya_A 370 RMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT----PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRD 445 (496)
T ss_dssp BCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC----TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSS
T ss_pred ccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe----CCCCEEEEecccccccccCccccccCCCCchhhhhcCC
Confidence 468999 788842 5789999999999999997 58999999998653 67788 568999999
Q ss_pred CceEEEcCC-CCEEEEeCCCCEEEEEeCCCC
Q 029556 106 PKSFAVDMK-GNIYVADKSNHVIRKITNLDH 135 (191)
Q Consensus 106 P~gIavD~~-G~iyVaD~~n~rIr~i~~~~~ 135 (191)
|.||++|++ |+|||||+.|||||+|++++.
T Consensus 446 P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 446 VSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred CcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 999999996 999999999999999999664
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.62 E-value=1.1e-15 Score=135.30 Aligned_cols=87 Identities=31% Similarity=0.412 Sum_probs=77.9
Q ss_pred CCCCeeeEEE--------ecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCC---ccCCCC-CCcccccCCCceEE
Q 029556 43 LEINPHSVID--------RPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGV---QGYSDG-EPGSARFDKPKSFA 110 (191)
Q Consensus 43 ~~~~P~gIav--------~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~---~G~~DG-~~~~a~f~~P~gIa 110 (191)
.++.|.++++ ++.+++|||+|+.||||++++ ++|.+.+++|.+. .|+.|| .+..++|++|.||+
T Consensus 333 ~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~----~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~gia 408 (433)
T 4hw6_A 333 RLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT----PEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIA 408 (433)
T ss_dssp BCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC----TTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEE
T ss_pred EEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC----CCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEE
Confidence 4678999999 248899999999999999997 5899999999876 677788 66789999999999
Q ss_pred Ec-CCCCEEEEeCCCCEEEEEeCC
Q 029556 111 VD-MKGNIYVADKSNHVIRKITNL 133 (191)
Q Consensus 111 vD-~~G~iyVaD~~n~rIr~i~~~ 133 (191)
+| ++|+|||||++|+|||+|+++
T Consensus 409 vd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 409 YDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCCEEEEEeCCCCEEEEEecC
Confidence 99 889999999999999999975
No 3
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.59 E-value=2.6e-14 Score=125.10 Aligned_cols=86 Identities=22% Similarity=0.350 Sum_probs=77.0
Q ss_pred CCCeeeEEEecCCCeEEEEeC-CCCeEEEEecCCCCCceEEEEecC-CCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 44 EINPHSVIDRPGSSDLIVLDS-SRSAFYTLSFPLSEESVVKRLAGD-GVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~-~n~~I~~~d~~~~~~g~v~~~aG~-~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
+..|++|+++ ++|+|||+|+ .+|+|+++++ ++|.+.+++|. +..|+.||.+..++|+.|+||++|++|+|||||
T Consensus 322 ~~~P~gia~d-~dG~lyvad~~~~~~I~~~~~---~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 322 FAQPNGMTVD-EDGNFYIVDGFKGYCLRKLDI---LDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp CSSEEEEEEC-TTCCEEEEETTTTCEEEEEET---TTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred eCCCeEEEEe-CCCCEEEEeCCCCCEEEEEEC---CCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 5789999995 7788999999 9999999985 58999999997 457777887788999999999999999999999
Q ss_pred CCCCEEEEEeCC
Q 029556 122 KSNHVIRKITNL 133 (191)
Q Consensus 122 ~~n~rIr~i~~~ 133 (191)
+.|+|||+++++
T Consensus 398 ~~n~~Ir~i~~e 409 (409)
T 3hrp_A 398 AWGKAIRKYAVE 409 (409)
T ss_dssp STTCEEEEEEEC
T ss_pred CCCCeEEEEEeC
Confidence 999999999863
No 4
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=3.7e-13 Score=117.79 Aligned_cols=95 Identities=24% Similarity=0.349 Sum_probs=80.5
Q ss_pred CCee-eEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCC-CccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 45 INPH-SVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDG-VQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 45 ~~P~-gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~-~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
.+|. +++++|.+++||++|..+++|++++. +|.+.+++|.. ..|+.||....++|+.|.||++|++|+|||||+
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~----~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITP----DGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECT----TCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEec----CCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 4577 99998658999999999999999984 77788889875 567778866788999999999999999999999
Q ss_pred -CCCEEEEEeCCCCCceEEEEe
Q 029556 123 -SNHVIRKITNLDHGNQLIRQI 143 (191)
Q Consensus 123 -~n~rIr~i~~~~~~~~~i~~i 143 (191)
.|++|+++++.++...++.+.
T Consensus 342 ~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 342 FKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TTTCEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEECCCCEEEEEeCC
Confidence 999999999656555555553
No 5
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=2.1e-14 Score=129.86 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=78.9
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceE---EEEecC-CCccCCCCCCcccccCCCc-eEEEc-------
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV---KRLAGD-GVQGYSDGEPGSARFDKPK-SFAVD------- 112 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v---~~~aG~-~~~G~~DG~~~~a~f~~P~-gIavD------- 112 (191)
..|++||++|.+..|||+|+.+|+|++++.+.. .+.+ .+++|. +..|+.||.+..++|+.|. ++++|
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~-~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI-KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC-cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 468999996444449999999999999886321 2343 688997 6788889988899999999 88998
Q ss_pred CCCCEEEEeCCCCEEEEEeCCCCCceEEEEe
Q 029556 113 MKGNIYVADKSNHVIRKITNLDHGNQLIRQI 143 (191)
Q Consensus 113 ~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i 143 (191)
++|+|||||+.|||||++++.+ ..+++.+-
T Consensus 389 ~~g~lyVaD~~N~rIr~i~~~G-~v~TiaG~ 418 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVTPEG-IVSTYAGR 418 (496)
T ss_dssp CCEEEEEEEGGGTEEEEECTTC-BEEEEEES
T ss_pred CCCeEEEEECCCCEEEEEeCCC-CEEEEecc
Confidence 6799999999999999999754 56677664
No 6
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=1.9e-14 Score=127.09 Aligned_cols=87 Identities=26% Similarity=0.446 Sum_probs=75.2
Q ss_pred CCCCee-eEEEe-------cCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCC---ccCCCC-CCcccccCCCceEE
Q 029556 43 LEINPH-SVIDR-------PGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGV---QGYSDG-EPGSARFDKPKSFA 110 (191)
Q Consensus 43 ~~~~P~-gIav~-------d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~---~G~~DG-~~~~a~f~~P~gIa 110 (191)
.++.|. +++++ |++++|||+|+.||||++++ ++|++.+++|.+. .|+.|| .+.+++|+.|.||+
T Consensus 330 ~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~----~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~gia 405 (430)
T 3tc9_A 330 RMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT----PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIV 405 (430)
T ss_dssp BBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC----TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEE
T ss_pred EeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC----CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEE
Confidence 367899 89985 25689999999999999997 5899999999853 455677 56789999999999
Q ss_pred EcC-CCCEEEEeCCCCEEEEEeCC
Q 029556 111 VDM-KGNIYVADKSNHVIRKITNL 133 (191)
Q Consensus 111 vD~-~G~iyVaD~~n~rIr~i~~~ 133 (191)
+|+ +|+|||||++|+|||+++++
T Consensus 406 vd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 406 YDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCCEEEEEECCCCeEEEEccC
Confidence 998 59999999999999999975
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.44 E-value=3.8e-12 Score=112.56 Aligned_cols=96 Identities=16% Similarity=0.247 Sum_probs=76.4
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc---eEEEEecC-CCccCCCCCCcccccCCCceEEE---------
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES---VVKRLAGD-GVQGYSDGEPGSARFDKPKSFAV--------- 111 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g---~v~~~aG~-~~~G~~DG~~~~a~f~~P~gIav--------- 111 (191)
..|.+|+++++++.|||+|..+|+|++++++.. .+ ...+++|. +..|+.||....++|+.|.||++
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~-~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~d 351 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRE-TGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGE 351 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTT-TCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTS
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCC-CcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccccccc
Confidence 356789997444459999999999999986421 23 35688887 66788888778899999999999
Q ss_pred cCCCCEEEEeCCCCEEEEEeCCCCCceEEEE
Q 029556 112 DMKGNIYVADKSNHVIRKITNLDHGNQLIRQ 142 (191)
Q Consensus 112 D~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~ 142 (191)
|++|+|||||+.|+|||++++.+ ...++.+
T Consensus 352 d~~g~lyvaD~~n~~I~~~~~~G-~v~t~~G 381 (433)
T 4hw6_A 352 EDEYDFYFCDRDSHTVRVLTPEG-RVTTYAG 381 (433)
T ss_dssp SCCEEEEEEETTTTEEEEECTTS-EEEEEEC
T ss_pred CCCCcEEEEECCCCEEEEECCCC-CEEEEEe
Confidence 99999999999999999999854 3444443
No 8
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.31 E-value=1.6e-11 Score=108.25 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=75.2
Q ss_pred CCeeeEEEecCCCe-EEEEeCCCCeEEEEecCCCCCc---eEEEEecC-CCccCCCCCCcccccCCCc-eEEE-------
Q 029556 45 INPHSVIDRPGSSD-LIVLDSSRSAFYTLSFPLSEES---VVKRLAGD-GVQGYSDGEPGSARFDKPK-SFAV------- 111 (191)
Q Consensus 45 ~~P~gIav~d~~g~-lyVaD~~n~~I~~~d~~~~~~g---~v~~~aG~-~~~G~~DG~~~~a~f~~P~-gIav------- 111 (191)
..|++|+++ ++++ |||+|..+|+|++++.+.. .+ .+.+++|. +..|+.||....++|+.|. ++++
T Consensus 270 ~~P~gia~~-pdG~~lyv~d~~~~~I~~~~~d~~-~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~ 347 (430)
T 3tc9_A 270 GWEFHIQFH-PSGNYAYIVVVNQHYILRSDYDWK-TKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKG 347 (430)
T ss_dssp SCCEEEEEC-TTSSEEEEEETTTTEEEEEEEETT-TTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTT
T ss_pred CcceeEEEc-CCCCEEEEEECCCCEEEEEeCCcc-cccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccc
Confidence 469999996 5555 9999999999999986421 12 25678886 5677778877788999999 8999
Q ss_pred -cCCCCEEEEeCCCCEEEEEeCCCCCceEEEEe
Q 029556 112 -DMKGNIYVADKSNHVIRKITNLDHGNQLIRQI 143 (191)
Q Consensus 112 -D~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i 143 (191)
|++|+|||||++|+||+++++++ ...++.+.
T Consensus 348 ~D~~g~lyvaD~~n~~I~~i~~~G-~v~~~~g~ 379 (430)
T 3tc9_A 348 SSDEYDFYFCDRENHCIRILTPQG-RVTTFAGR 379 (430)
T ss_dssp SSCCEEEEEEEGGGTEEEEECTTS-EEEEEEEC
T ss_pred cCCCCeEEEEECCCcEEEEECCCC-cEEEEEeC
Confidence 46799999999999999999754 34444443
No 9
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.19 E-value=1.8e-10 Score=96.63 Aligned_cols=83 Identities=23% Similarity=0.318 Sum_probs=66.6
Q ss_pred CCCeeeEEEecCCCeEEEEeC-CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCC-CCEEEEe
Q 029556 44 EINPHSVIDRPGSSDLIVLDS-SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIYVAD 121 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~-~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~-G~iyVaD 121 (191)
+..|++|++++.++++||+|+ .+++|++++ ++|+.....+....+ +.+..++|+.|.+|++|++ |++||+|
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~----~~g~~~~~~~~~g~~---~~~~~~~~~~p~gia~d~~~g~l~v~d 214 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS----PSGKFVTQWGEESSG---SSPRPGQFSVPHSLALVPHLDQLCVAD 214 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSSCCEEEEEC----TTSCEEEEECEECCS---SSCCTTEESCEEEEEEETTTTEEEEEE
T ss_pred cCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc----CCCCEEEEeccCCCC---CCCCCcccCCCcEEEEECCCCEEEEEE
Confidence 458999999644899999997 799999998 477766555432111 1223578999999999998 9999999
Q ss_pred CCCCEEEEEeCC
Q 029556 122 KSNHVIRKITNL 133 (191)
Q Consensus 122 ~~n~rIr~i~~~ 133 (191)
..+++|++++++
T Consensus 215 ~~~~~I~~~~~~ 226 (329)
T 3fvz_A 215 RENGRIQCFKTD 226 (329)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCEEEEEECC
Confidence 999999999997
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.13 E-value=1.1e-09 Score=91.70 Aligned_cols=84 Identities=21% Similarity=0.270 Sum_probs=65.5
Q ss_pred cCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce---EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCE
Q 029556 42 QLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV---VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNI 117 (191)
Q Consensus 42 ~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~---v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~i 117 (191)
..+..|++|+++ ++|++||+|..+++|++++. +|. +..+...+..|. ....++.|.+|++|+ +|++
T Consensus 88 ~~~~~p~gia~d-~~g~l~v~d~~~~~v~~~~~----~g~~~~~~~~~~~~~~g~-----~~~~~~~P~~ia~~~~~g~l 157 (329)
T 3fvz_A 88 NLFYLPHGLSID-TDGNYWVTDVALHQVFKLDP----HSKEGPLLILGRSMQPGS-----DQNHFCQPTDVAVEPSTGAV 157 (329)
T ss_dssp TTCSSEEEEEEC-TTSCEEEEETTTTEEEEECT----TCSSCCSEEESBTTBCCC-----STTCCSSEEEEEECTTTCCE
T ss_pred CccCCceEEEEC-CCCCEEEEECCCCEEEEEeC----CCCeEEEEEecccCCCCC-----CccccCCCcEEEEeCCCCeE
Confidence 446799999995 78899999999999999984 443 333332222322 245788999999998 8999
Q ss_pred EEEeC-CCCEEEEEeCCCC
Q 029556 118 YVADK-SNHVIRKITNLDH 135 (191)
Q Consensus 118 yVaD~-~n~rIr~i~~~~~ 135 (191)
||+|. .+++|+++++.+.
T Consensus 158 yv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp EEEECSSCCEEEEECTTSC
T ss_pred EEEeCCCCCeEEEEcCCCC
Confidence 99996 8999999998654
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.03 E-value=3.6e-09 Score=90.55 Aligned_cols=81 Identities=15% Similarity=0.229 Sum_probs=63.4
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEe
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD 121 (191)
+..|++|+++|.++.||++|.++ ++|+++++ +|....... ...+..|.||++|. ++.||++|
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~----dG~~~~~~~------------~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSM----DGSGRRIIA------------DTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEET----TSCSCEESC------------CSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeC----CCCCcEEEE------------ECCCCCcceEEEeCCCCEEEEEE
Confidence 46899999987799999999998 99999985 453222221 12366899999995 68899999
Q ss_pred CCCCEEEEEeCCCCCceEE
Q 029556 122 KSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 122 ~~n~rIr~i~~~~~~~~~i 140 (191)
+.+++|++++.++...+++
T Consensus 222 ~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 222 AKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp TTTTEEEEEETTSCSCEEE
T ss_pred CCCCEEEEEeCCCCceEEE
Confidence 9999999999976543433
No 12
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.00 E-value=1.1e-08 Score=85.96 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=64.2
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEe
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD 121 (191)
...|++++++|.++.||++|.++ ++|+++++ +|........ ..+..|.||++|. ++.||++|
T Consensus 119 ~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~----dG~~~~~~~~------------~~~~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 119 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL----NGVDIYSLVT------------ENIQWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEET----TSCCEEEEEC------------SSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCcceEEeCCCCCEEEEEccCCCCeEEEEcC----CCCCeEEEEE------------CCCCCceEEEEeccCCEEEEEE
Confidence 46899999986799999999986 89999985 5543332221 1467899999996 57899999
Q ss_pred CCCCEEEEEeCCCCCceEEE
Q 029556 122 KSNHVIRKITNLDHGNQLIR 141 (191)
Q Consensus 122 ~~n~rIr~i~~~~~~~~~i~ 141 (191)
+.+++|.+++.++...+++.
T Consensus 183 ~~~~~I~~~d~dg~~~~~~~ 202 (316)
T 1ijq_A 183 SKLHSISSIDVNGGNRKTIL 202 (316)
T ss_dssp TTTTEEEEEETTSCSCEEEE
T ss_pred CCCCeEEEEecCCCceEEEe
Confidence 99999999999765444443
No 13
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.00 E-value=1.6e-08 Score=85.10 Aligned_cols=91 Identities=18% Similarity=0.162 Sum_probs=66.5
Q ss_pred cCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc-----eEEEEecCCCccCCCCCCccccc
Q 029556 29 EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES-----VVKRLAGDGVQGYSDGEPGSARF 103 (191)
Q Consensus 29 ~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g-----~v~~~aG~~~~G~~DG~~~~a~f 103 (191)
.++..+..++.+ +.+|.++++++.++.||++|..+++|+++++ +| ....+. ...+
T Consensus 17 ~~~~~~~~~~~~---~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~----~g~~~~~~~~~~~-------------~~~~ 76 (316)
T 1ijq_A 17 LDRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQL----DRAHGVSSYDTVI-------------SRDI 76 (316)
T ss_dssp TTSCCCEEEECS---CSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------CEEEE-------------CSSC
T ss_pred CCCcceEehhcC---CCceEEEEEEeCCCEEEEEECCCCcEEEEEC----CCCCCCcccEEEE-------------eCCC
Confidence 344445555544 3589999997668899999999999999985 33 112222 1235
Q ss_pred CCCceEEEcC-CCCEEEEeCCCCEEEEEeCCCCCceE
Q 029556 104 DKPKSFAVDM-KGNIYVADKSNHVIRKITNLDHGNQL 139 (191)
Q Consensus 104 ~~P~gIavD~-~G~iyVaD~~n~rIr~i~~~~~~~~~ 139 (191)
..|.||++|. .|+||++|..+++|.++++++...++
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 113 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT 113 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEE
Confidence 6899999995 68999999999999999987654333
No 14
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.98 E-value=3.1e-08 Score=93.93 Aligned_cols=81 Identities=17% Similarity=0.253 Sum_probs=64.5
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEc-CCCCEEEE
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVD-MKGNIYVA 120 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD-~~G~iyVa 120 (191)
+..|++||+++.++.||++|.++ ++|.++++ +|. ..+++. ..+..|.||++| .+|.||++
T Consensus 513 l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~----dG~~~~~lv~-------------~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 513 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL----NGVDIYSLVT-------------ENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEET----TSCCEEEEEC-------------SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCcceEEEecCCCCEEEecCCCCCeEEEEec----CCCceEEEEe-------------CCCCCceEEEEecCCCeEEEE
Confidence 45899999987789999999987 89999986 554 333331 246789999999 56899999
Q ss_pred eCCCCEEEEEeCCCCCceEEE
Q 029556 121 DKSNHVIRKITNLDHGNQLIR 141 (191)
Q Consensus 121 D~~n~rIr~i~~~~~~~~~i~ 141 (191)
|+.+++|++++..+...+++.
T Consensus 576 D~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 576 DSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp ETTTTEEEEEETTSCSCEEEE
T ss_pred eCCCCcEEEEecCCCceEEEe
Confidence 999999999999776555443
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.97 E-value=4.7e-09 Score=90.98 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=63.3
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEE
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVa 120 (191)
+..|++|+++|.++.||++|.++ ++|+++++ +|. ...++. ..+..|.||++|. ++.||++
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~----dG~~~~~~~~-------------~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSM----DGSGRRIIAD-------------THLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEET----TSCSCEEEEC-------------SSCSCEEEEEEEGGGTEEEEE
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC----CCCCcEEEEE-------------CCCCCeeeEEEeCCCCEEEEE
Confidence 46899999987899999999998 99999985 443 223321 1366899999994 6899999
Q ss_pred eCCCCEEEEEeCCCCCceEE
Q 029556 121 DKSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 121 D~~n~rIr~i~~~~~~~~~i 140 (191)
|+.+++|++++.++....++
T Consensus 264 D~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 264 DAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp ETTTTEEEEECTTSCSCEEE
T ss_pred ECCCCEEEEEeCCCCeeEEE
Confidence 99999999999876443333
No 16
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.97 E-value=2.2e-08 Score=84.94 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=60.6
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
+..|+||++++.++.||++|+.+++|+++++ +|. .++++. ..+..|.|+++| ++.+|++|+
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~----dG~~~~~~~~-------------~~~~~P~glav~-~~~lywtd~ 226 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNL----DGTNRQAVVK-------------GSLPHPFALTLF-EDILYWTDW 226 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEEC-------------SCCSCEEEEEEE-TTEEEEEET
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcC----CCCceEEEec-------------CCCCCceEEEEe-CCEEEEEec
Confidence 4689999998679999999999999999986 332 333331 135689999998 568999999
Q ss_pred CCCEEEEEeCCCCC
Q 029556 123 SNHVIRKITNLDHG 136 (191)
Q Consensus 123 ~n~rIr~i~~~~~~ 136 (191)
.+++|.++++.++.
T Consensus 227 ~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 227 STHSILACNKYTGE 240 (318)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCeEEEEECCCCC
Confidence 99999999996543
No 17
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.97 E-value=2.1e-08 Score=85.70 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=68.7
Q ss_pred ecCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCc
Q 029556 28 LEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPK 107 (191)
Q Consensus 28 ~~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~ 107 (191)
..+|..++.+..+. .+|.++++++.++.||++|..+++|++++++ .+....+.. ..+..|.
T Consensus 59 ~~~g~~~~~~~~~~---~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~---g~~~~~~~~-------------~~~~~p~ 119 (349)
T 3v64_C 59 LPHRSEYTLLLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANLN---GSNVEEVVS-------------TGLESPG 119 (349)
T ss_dssp CTTSCCEEEEECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEEC-------------SSCSCCC
T ss_pred eCCCCeeEEeecCC---CceEEEEEeccccEEEEEeccCCceEEEecC---CCCceEEEe-------------CCCCCcc
Confidence 34565666665544 4899999977789999999999999999852 222333332 1245799
Q ss_pred eEEEcC-CCCEEEEeCCCCEEEEEeCCCCCc
Q 029556 108 SFAVDM-KGNIYVADKSNHVIRKITNLDHGN 137 (191)
Q Consensus 108 gIavD~-~G~iyVaD~~n~rIr~i~~~~~~~ 137 (191)
|+++|. .|+||++|..+++|.++++++...
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 999996 689999999999999999876543
No 18
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.97 E-value=7.9e-09 Score=87.64 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=63.2
Q ss_pred CCCeeeEEEecCCCeEEEEeCC-CCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEE
Q 029556 44 EINPHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~-n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVa 120 (191)
...|++|+++|.++.||++|.+ +++|+++++ +|. .+.++. ..+..|.||++|. ++.||++
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~----dG~~~~~~~~-------------~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGM----DGSSRFIIIN-------------SEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEET----TSCSCEEEEC-------------SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEc----CCCCeEEEEE-------------CCCCCccEEEEeccCCEEEEE
Confidence 4689999998778999999976 799999985 554 223321 1367899999996 5889999
Q ss_pred eCCCCEEEEEeCCCCCceEE
Q 029556 121 DKSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 121 D~~n~rIr~i~~~~~~~~~i 140 (191)
|+.+++|++++.++...+++
T Consensus 184 D~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 184 DAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp ETTTTEEEEEETTSCSCEEE
T ss_pred ECCCCEEEEEcCCCCceEEE
Confidence 99999999999976544444
No 19
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.95 E-value=1.2e-08 Score=89.01 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=63.3
Q ss_pred CCCeeeEEEecCCCeEEEEeCC-CCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEE
Q 029556 44 EINPHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~-n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVa 120 (191)
+..|++|+++|.++.||++|.+ +++|+++++ +|. ...++. ..+..|.||++|. ++.||++
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~----dG~~~~~~~~-------------~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL----NGVDIYSLVT-------------ENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEET----TSCSCEEEEC-------------SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeC----CCCccEEEEE-------------CCCCceEEEEEEeCCCEEEEE
Confidence 4589999998779999999987 589999986 553 223321 2367899999995 5889999
Q ss_pred eCCCCEEEEEeCCCCCceEEE
Q 029556 121 DKSNHVIRKITNLDHGNQLIR 141 (191)
Q Consensus 121 D~~n~rIr~i~~~~~~~~~i~ 141 (191)
|+.+++|++++.++...+++.
T Consensus 264 D~~~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 264 DSKLHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp ETTTTEEEEEETTSCCCEEEE
T ss_pred ECCCCEEEEEeCCCCccEEEE
Confidence 999999999999765444443
No 20
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.95 E-value=2.1e-08 Score=86.86 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=67.5
Q ss_pred CCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc-eEEEEecCCCccCCCCCCcccccCCCce
Q 029556 30 DGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES-VVKRLAGDGVQGYSDGEPGSARFDKPKS 108 (191)
Q Consensus 30 dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g-~v~~~aG~~~~G~~DG~~~~a~f~~P~g 108 (191)
++..+..+.++. ..|.++++++.++.||++|..+++|+++++ +| ....+... .+..|.|
T Consensus 104 ~~~~~~~~~~~~---~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~----~g~~~~~~~~~-------------~~~~p~g 163 (386)
T 3v65_B 104 HRSEYTLLLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANL----NGSNVEEVVST-------------GLESPGG 163 (386)
T ss_dssp TSCCCEEEECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEET----TSCCEEEEECS-------------SCSCCCC
T ss_pred CCCcEEEEecCC---CccEEEEEecCCCeEEEEeCCCCcEEEEec----CCCCcEEEEeC-------------CCCCccE
Confidence 444455555443 489999997678999999999999999985 33 34444321 2458999
Q ss_pred EEEcC-CCCEEEEeCCCCEEEEEeCCCCCc
Q 029556 109 FAVDM-KGNIYVADKSNHVIRKITNLDHGN 137 (191)
Q Consensus 109 IavD~-~G~iyVaD~~n~rIr~i~~~~~~~ 137 (191)
|++|. .|+||++|..+++|+++++++...
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 99995 689999999999999999876543
No 21
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.93 E-value=3.4e-08 Score=79.88 Aligned_cols=76 Identities=17% Similarity=0.292 Sum_probs=60.7
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|++|+++ +++++||+|..+++|++++. +|......+. ...+..|.+|++|++|++|+++..
T Consensus 163 ~~~p~~i~~~-~~g~l~v~~~~~~~i~~~~~----~g~~~~~~~~-----------~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 163 LEFPNGVVVN-DKQEIFISDNRAHCVKVFNY----EGQYLRQIGG-----------EGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp CSSEEEEEEC-SSSEEEEEEGGGTEEEEEET----TCCEEEEESC-----------TTTSCSEEEEEECTTCCEEEEECS
T ss_pred cCCcEEEEEC-CCCCEEEEECCCCEEEEEcC----CCCEEEEEcc-----------CCccCCCcEEEECCCCCEEEEeCC
Confidence 4579999995 78999999999999999984 5543332221 123568999999999999999998
Q ss_pred CC-EEEEEeCCCC
Q 029556 124 NH-VIRKITNLDH 135 (191)
Q Consensus 124 n~-rIr~i~~~~~ 135 (191)
++ +|+++++.+.
T Consensus 227 ~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 227 NNFNLTIFTQDGQ 239 (286)
T ss_dssp SSCEEEEECTTSC
T ss_pred CCEEEEEECCCCC
Confidence 86 9999998664
No 22
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.92 E-value=2.1e-08 Score=87.37 Aligned_cols=93 Identities=17% Similarity=0.158 Sum_probs=67.0
Q ss_pred CCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-ceEEEEecCCCccCCCCCCcccccCCCce
Q 029556 30 DGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKS 108 (191)
Q Consensus 30 dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-g~v~~~aG~~~~G~~DG~~~~a~f~~P~g 108 (191)
++..++.++.+ ..+|.+|++++.++.||++|..+++|++++++-... +....++. ..+..|.|
T Consensus 100 ~~~~~~~~~~~---~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-------------~~~~~p~g 163 (400)
T 3p5b_L 100 DRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------------RDIQAPDG 163 (400)
T ss_dssp TSCSCEEEECS---CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-------------SSCSCEEE
T ss_pred CCcceeEeccc---cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-------------CCCCCccc
Confidence 44444555544 359999999767899999999999999998521000 12233332 23568999
Q ss_pred EEEcC-CCCEEEEeCCCCEEEEEeCCCCCce
Q 029556 109 FAVDM-KGNIYVADKSNHVIRKITNLDHGNQ 138 (191)
Q Consensus 109 IavD~-~G~iyVaD~~n~rIr~i~~~~~~~~ 138 (191)
||+|. .|+||++|..+++|+++++++...+
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~ 194 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 194 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEE
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceE
Confidence 99997 6899999999999999999765443
No 23
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.91 E-value=9.1e-08 Score=77.41 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=59.9
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEeC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADK 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD~ 122 (191)
..|+++++++.++++|++|..+++|.++++ +|. ...+.. ..+..|.++++|+ .|.+|++|.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~----~g~~~~~~~~-------------~~~~~P~~i~vd~~~g~lyv~~~ 141 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKM----DGTQRRVLFD-------------TGLVNPRGIVTDPVRGNLYWTDW 141 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEEC-------------SSCSSEEEEEEETTTTEEEEEEC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEc----CCCCEEEEEE-------------CCCCCccEEEEeeCCCEEEEEEC
Confidence 589999997568999999999999999985 332 222321 1246899999998 589999998
Q ss_pred C--CCEEEEEeCCCCCce
Q 029556 123 S--NHVIRKITNLDHGNQ 138 (191)
Q Consensus 123 ~--n~rIr~i~~~~~~~~ 138 (191)
. +++|.++++++...+
T Consensus 142 ~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 142 NRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp CSSSCEEEEEETTSCCCE
T ss_pred CCCCcEEEEEecCCCCcE
Confidence 7 789999998654333
No 24
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.89 E-value=3.2e-08 Score=81.59 Aligned_cols=106 Identities=11% Similarity=0.192 Sum_probs=73.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceE---EEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV---KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v---~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
..|++++++|++..+|++|+.+++|++++.+. .+|.+ ..+.... .....|.|+++|++|++|+++
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~-~~G~~~~~~~~~~~~-----------~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDL-QTGQISNRRSVYKLE-----------KEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECT-TTCCEEEEEEEEECC-----------GGGCEEEEEEEBTTSCEEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccC-CCCcccCcEEEEECC-----------CCCCCCCeeEECCCCCEEEEE
Confidence 47999999866667999999999999998632 34543 2222111 012369999999999999999
Q ss_pred CCCCEEEEEeCCCCCceEEEEeccC---CCceEeccCCCCccEEEEE
Q 029556 122 KSNHVIRKITNLDHGNQLIRQINLK---PEDCSKSSQSGSGMFWVTV 165 (191)
Q Consensus 122 ~~n~rIr~i~~~~~~~~~i~~i~~~---~~~~~~~~~~g~~~~~~~~ 165 (191)
+.+++|.+++++++ +.++.+.++ ++.|++.... ...+|+.+
T Consensus 217 ~~~~~v~~~d~~tG--~~~~~i~~p~~~~t~~~f~g~d-~~~L~vt~ 260 (297)
T 3g4e_A 217 YNGGRVIRLDPVTG--KRLQTVKLPVDKTTSCCFGGKN-YSEMYVTC 260 (297)
T ss_dssp ETTTEEEEECTTTC--CEEEEEECSSSBEEEEEEESGG-GCEEEEEE
T ss_pred cCCCEEEEEcCCCc--eEEEEEECCCCCceEEEEeCCC-CCEEEEEc
Confidence 99999999999743 345555555 3456665222 23555554
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.89 E-value=7.2e-08 Score=78.01 Aligned_cols=80 Identities=13% Similarity=0.059 Sum_probs=62.4
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
...|+++++++.++.||++|..+++|++++. ++. ...+.. .+..|.||++| ++.+|++|+
T Consensus 166 ~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~----~g~~~~~~~~--------------~~~~P~gi~~d-~~~lyva~~ 226 (267)
T 1npe_A 166 LGLPNGLTFDAFSSQLCWVDAGTHRAECLNP----AQPGRRKVLE--------------GLQYPFAVTSY-GKNLYYTDW 226 (267)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEET----TEEEEEEEEE--------------CCCSEEEEEEE-TTEEEEEET
T ss_pred CCCCcEEEEcCCCCEEEEEECCCCEEEEEec----CCCceEEEec--------------CCCCceEEEEe-CCEEEEEEC
Confidence 3589999997667899999999999999985 443 333321 13479999999 689999999
Q ss_pred CCCEEEEEeCCCCCceEEEEec
Q 029556 123 SNHVIRKITNLDHGNQLIRQIN 144 (191)
Q Consensus 123 ~n~rIr~i~~~~~~~~~i~~i~ 144 (191)
.+++|++++++++ +.++.+.
T Consensus 227 ~~~~v~~~d~~~g--~~~~~i~ 246 (267)
T 1npe_A 227 KTNSVIAMDLAIS--KEMDTFH 246 (267)
T ss_dssp TTTEEEEEETTTT--EEEEEEC
T ss_pred CCCeEEEEeCCCC--CceEEEc
Confidence 9999999999754 3445554
No 26
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.88 E-value=6e-08 Score=89.40 Aligned_cols=81 Identities=16% Similarity=0.259 Sum_probs=64.6
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEE
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVa 120 (191)
+..|++|+++|.+|.||++|.++ .+|.+.++ +|. ...++ ...+..|.||++|. ++.||++
T Consensus 434 l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~----dG~~~~~l~-------------~~~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 434 LEEPRAIVLDPMVGYMYWTDWGEIPKIERAAL----DGSDRVVLV-------------NTSLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp CCSEEEEEEETTTTEEEEEECSSSCEEEEEET----TSCSCEEEE-------------CSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCeeeEEEEcCCCcEEEecCCCCCEEEEEcc----CCCccEEEE-------------eCCCCCCeeeEEcccCCEEEEE
Confidence 57999999987789999999875 89999986 453 22222 12467999999996 5899999
Q ss_pred eCCCCEEEEEeCCCCCceEEE
Q 029556 121 DKSNHVIRKITNLDHGNQLIR 141 (191)
Q Consensus 121 D~~n~rIr~i~~~~~~~~~i~ 141 (191)
|..+++|++++.++...+++.
T Consensus 497 D~~~~~I~~~~~dG~~~~~~~ 517 (619)
T 3s94_A 497 DAKTDKIEVMNTDGTGRRVLV 517 (619)
T ss_dssp ETTTTEEEEEESSSCCCEEEE
T ss_pred ECCCCEEEEEecCCCceEEEe
Confidence 999999999999776555553
No 27
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.87 E-value=8.7e-08 Score=79.53 Aligned_cols=107 Identities=13% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
+..|++| +++++.+||+|+.+++|++++.+. +|.+ +.. ..-+.+..|.||++|++|++|||++.
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~--~g~~----~~~--------~~~~~~~~P~gi~vd~dG~l~va~~~ 231 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS--TDKP----GEP--------EIFVEQTNIDDFAFDVEGNLYGATHI 231 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBCT--TSCB----CCC--------EEEEESCCCSSEEEBTTCCEEEECBT
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC--CCCC----Ccc--------EEEeccCCCCCeEECCCCCEEEEeCC
Confidence 4589999 456789999999999999998631 2321 000 00123468999999999999999999
Q ss_pred CCEEEEEeCCCCCceEEEEeccC---CCceEeccC-CCCccEEEEEec
Q 029556 124 NHVIRKITNLDHGNQLIRQINLK---PEDCSKSSQ-SGSGMFWVTVFS 167 (191)
Q Consensus 124 n~rIr~i~~~~~~~~~i~~i~~~---~~~~~~~~~-~g~~~~~~~~~~ 167 (191)
+++|.++++++. ...+.++..+ +..+++... ...+.+|+...+
T Consensus 232 ~~~V~~~~~~G~-~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 232 YNSVVRIAPDRS-TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp TCCEEEECTTCC-EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCeEEEECCCCC-EEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 999999999642 2334455543 455665420 112356666543
No 28
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.83 E-value=5.9e-08 Score=89.63 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=62.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEeC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADK 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD~ 122 (191)
..|+|+|++..+++||++|..+++|.++++ +|. .+++.. ..+..|.+|++|+ +|.||++|+
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~----dG~~~~~l~~-------------~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKL----DGQHRQVLVW-------------KDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEET----TSTTCEEEEC-------------SSCCCEEEEEEETTTTEEEEEEC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEec----CCCcEEEEEe-------------CCCCCcccEEEccCCCeEEEeCC
Confidence 589999997678999999999999999985 443 223321 2366899999997 699999998
Q ss_pred C-CCEEEEEeCCCCCceEE
Q 029556 123 S-NHVIRKITNLDHGNQLI 140 (191)
Q Consensus 123 ~-n~rIr~i~~~~~~~~~i 140 (191)
+ +.+|.++++++...+.+
T Consensus 143 g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp SSSCEEEEEETTSCSCEEE
T ss_pred CCCCEEEEEeCCCCceEEE
Confidence 7 88999999977654443
No 29
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.83 E-value=4.3e-07 Score=73.35 Aligned_cols=76 Identities=17% Similarity=0.267 Sum_probs=61.4
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|++++++ ++|++||+|..+++|++++. +|+.....+. ...+..|.+|++|++|++|++|..
T Consensus 120 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~----~g~~~~~~~~-----------~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 120 LQHPRGVTVD-NKGRIIVVECKVMRVIIFDQ----NGNVLHKFGC-----------SKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp CSCEEEEEEC-TTSCEEEEETTTTEEEEECT----TSCEEEEEEC-----------TTTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCCceEEEEe-CCCCEEEEECCCCEEEEEcC----CCCEEEEeCC-----------CCccCCcEEEEECCCCCEEEEECC
Confidence 4589999995 78899999999999999984 5654443332 123567999999999999999999
Q ss_pred CCEEEEEeCCCC
Q 029556 124 NHVIRKITNLDH 135 (191)
Q Consensus 124 n~rIr~i~~~~~ 135 (191)
+++|+++++.+.
T Consensus 184 ~~~i~~~~~~g~ 195 (286)
T 1q7f_A 184 AHCVKVFNYEGQ 195 (286)
T ss_dssp GTEEEEEETTCC
T ss_pred CCEEEEEcCCCC
Confidence 999999998653
No 30
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.82 E-value=5e-08 Score=81.19 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=60.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC-
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS- 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~- 123 (191)
..|++|++++++..+||+|+.+++|++++.+-...+....+.. +..|.||++|++|++||++..
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---------------~~gP~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---------------IPNPGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---------------CSSEEEEEECTTSCEEEEEEEE
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---------------CCCCCCeEECCCCCEEEEecCc
Confidence 5899999974445699999999999999863211133333331 112999999999999999976
Q ss_pred ---------CCEEEEEeCCCCCceEEEEeccC
Q 029556 124 ---------NHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 124 ---------n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
+++|.++++.+ +.++.+..+
T Consensus 250 ~~~~~~~~~~~~v~~~d~~G---~~~~~~~~~ 278 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEFG---NILEVIPLP 278 (322)
T ss_dssp TTSSTTSCEEEEEEEECTTS---CEEEEEECC
T ss_pred ccccccCCCccEEEEECCCC---CEEEEEECC
Confidence 67899999965 344555443
No 31
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.82 E-value=8.9e-08 Score=90.79 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=67.7
Q ss_pred CCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-ceEEEEecCCCccCCCCCCcccccCCCce
Q 029556 30 DGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKS 108 (191)
Q Consensus 30 dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-g~v~~~aG~~~~G~~DG~~~~a~f~~P~g 108 (191)
++..+..++.+. .+|.+|+++..++.||++|..+++|++++++-... +....++. ..+..|.|
T Consensus 412 ~~~~~~~l~~~~---~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-------------~~l~~P~G 475 (791)
T 3m0c_C 412 DRSEYTSLIPNL---RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------------RDIQAPDG 475 (791)
T ss_dssp TSCCCEEEECSC---SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-------------SSCSCCCE
T ss_pred cCCcceeeecCC---CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-------------cCCCCcce
Confidence 444555555543 49999999766899999999999999998621000 12233332 24668999
Q ss_pred EEEcCC-CCEEEEeCCCCEEEEEeCCCCCceEE
Q 029556 109 FAVDMK-GNIYVADKSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 109 IavD~~-G~iyVaD~~n~rIr~i~~~~~~~~~i 140 (191)
||+|.. ++||++|+.+++|+++++.+...+++
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l 508 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 508 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE
Confidence 999976 58999999999999999976544333
No 32
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.80 E-value=1.3e-07 Score=87.19 Aligned_cols=78 Identities=14% Similarity=0.177 Sum_probs=62.2
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCC-CCEEEEe
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIYVAD 121 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~-G~iyVaD 121 (191)
...|+|+|+|..+++||++|..+++|.++++ +|. .+++.. ..|+.|.+|++|+. |.||++|
T Consensus 391 ~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~----~G~~~~~l~~-------------~~l~~P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 391 IAHPDGIAVDWVARNLYWTDTGTDRIEVTRL----NGTMRKILIS-------------EDLEEPRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEEC-------------TTCCSEEEEEEETTTTEEEEEE
T ss_pred CCCcCceEEecccCcEEEEeCCCCcEEEEeC----CCCeEEEEEE-------------CCCCCeeeEEEEcCCCcEEEec
Confidence 3689999996568999999999999999985 444 233331 24779999999985 9999999
Q ss_pred CCC-CEEEEEeCCCCCce
Q 029556 122 KSN-HVIRKITNLDHGNQ 138 (191)
Q Consensus 122 ~~n-~rIr~i~~~~~~~~ 138 (191)
+++ .+|.++++++...+
T Consensus 454 ~g~~~~I~r~~~dG~~~~ 471 (619)
T 3s94_A 454 WGEIPKIERAALDGSDRV 471 (619)
T ss_dssp CSSSCEEEEEETTSCSCE
T ss_pred CCCCCEEEEEccCCCccE
Confidence 885 89999998765433
No 33
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.76 E-value=3.4e-07 Score=84.53 Aligned_cols=93 Identities=18% Similarity=0.273 Sum_probs=70.3
Q ss_pred cCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCC--eEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCC
Q 029556 29 EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRS--AFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDK 105 (191)
Q Consensus 29 ~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~--~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~ 105 (191)
.+|-..+++..+ ....|++|+++|.+|.||++|.+++ +|++.++ +|. ...++. ..+..
T Consensus 418 ~~G~~~~~l~~~--~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~----dG~~~~~l~~-------------~~l~~ 478 (628)
T 4a0p_A 418 LDGRSVGVVLKG--EQDRPRAVVVNPEKGYMYFTNLQERSPKIERAAL----DGTEREVLFF-------------SGLSK 478 (628)
T ss_dssp TTSCEEEEEEEC--TTCCEEEEEEETTTTEEEEEEEETTEEEEEEEET----TSCSCEEEEC-------------SSCSC
T ss_pred CCCCeEEEEEeC--CCCceeeEEEecCCCeEEEeecCCCCCeEEEEeC----CCCCcEEEEe-------------ccCCC
Confidence 366555555543 2468999999877999999999987 7999986 554 333331 13679
Q ss_pred CceEEEcCC-CCEEEEeCCCCEEEEEeCCCCCceEE
Q 029556 106 PKSFAVDMK-GNIYVADKSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 106 P~gIavD~~-G~iyVaD~~n~rIr~i~~~~~~~~~i 140 (191)
|.||++|.+ +.||++|..+++|++++.++...+++
T Consensus 479 P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~ 514 (628)
T 4a0p_A 479 PIALALDSRLGKLFWADSDLRRIESSDLSGANRIVL 514 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEE
Confidence 999999986 78999999999999999976544444
No 34
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.73 E-value=3.2e-08 Score=85.85 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=74.6
Q ss_pred ccCccE-EecCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEE---EEecCCCccCCCC
Q 029556 21 LVSSGL-LLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK---RLAGDGVQGYSDG 96 (191)
Q Consensus 21 ~~~g~l-~~~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~---~~aG~~~~G~~DG 96 (191)
.+.|.+ ++..+ .++.+.++.. .|+||+++|++..+||+|+..++|++++++ .+|++. .+ ..
T Consensus 200 ~~~g~vyr~d~~-~~~~~~~~l~---~pNGia~spDg~~lYvadt~~~~I~~~~~~--~~g~l~~~~~~-~~-------- 264 (355)
T 3sre_A 200 LAWSFVTYYSPN-DVRVVAEGFD---FANGINISPDGKYVYIAELLAHKIHVYEKH--ANWTLTPLRVL-SF-------- 264 (355)
T ss_dssp CCCEEEEEECTT-CCEEEEEEES---SEEEEEECTTSSEEEEEEGGGTEEEEEEEC--TTSCEEEEEEE-EC--------
T ss_pred CCccEEEEEECC-eEEEeecCCc---ccCcceECCCCCEEEEEeCCCCeEEEEEEC--CCCcEecCEEE-eC--------
Confidence 356677 44444 6677777665 999999987777999999999999999874 345332 22 11
Q ss_pred CCcccccCCCceEEEcC-CCCEEEEe-CCCCEEEEEeCCCCCceEEEEecc
Q 029556 97 EPGSARFDKPKSFAVDM-KGNIYVAD-KSNHVIRKITNLDHGNQLIRQINL 145 (191)
Q Consensus 97 ~~~~a~f~~P~gIavD~-~G~iyVaD-~~n~rIr~i~~~~~~~~~i~~i~~ 145 (191)
-..|+|+++|+ +|++|+|. ++..+|.+++|+....+.+.+|..
T Consensus 265 ------~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~ 309 (355)
T 3sre_A 265 ------DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQD 309 (355)
T ss_dssp ------SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEEC
T ss_pred ------CCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEEc
Confidence 12699999999 59999966 566788888887444456666653
No 35
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.73 E-value=1.8e-07 Score=74.54 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=58.5
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|++|+++ ++|++|+++..+++|++++. ++....... ...+..|.+|++|++|++|+++..+
T Consensus 150 ~~p~~i~~~-~~g~l~v~~~~~~~i~~~~~----~~~~~~~~~------------~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 150 NDPDGVAVD-NSGNVYVTDTDNNRVVKLEA----ESNNQVVLP------------FTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp CSCCCEEEC-TTCCEEEEEGGGTEEEEECT----TTCCEEECC------------CSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceeEEEe-CCCCEEEEECCCCEEEEEec----CCCceEeec------------ccCCCCceEEEECCCCCEEEEECCC
Confidence 589999995 77889999999999999985 332111110 1124689999999999999999999
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
++|+++++.+.
T Consensus 213 ~~v~~~~~~~~ 223 (270)
T 1rwi_B 213 NQVVKLLAGST 223 (270)
T ss_dssp SCEEEECTTCS
T ss_pred CcEEEEcCCCC
Confidence 99999999664
No 36
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.64 E-value=2.7e-07 Score=76.57 Aligned_cols=78 Identities=8% Similarity=0.065 Sum_probs=59.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|++++++ ++++||++|..+++|++++. ++....+...+ ..|++|++|++|++||+|..+
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~~~I~~~d~----~g~~~~~~~~~--------------~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEVGEIVSITP----DGNQQIHATVE--------------GKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECT----TCCEEEEEECS--------------SEEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEEC-CCCCEEEEeCCCCeEEEECC----CCceEEEEeCC--------------CCceeEEEcCCCcEEEEeccC
Confidence 589999995 68899999999999999984 55555544321 159999999999999999765
Q ss_pred C--EEEEEeCCCCCceEEE
Q 029556 125 H--VIRKITNLDHGNQLIR 141 (191)
Q Consensus 125 ~--rIr~i~~~~~~~~~i~ 141 (191)
+ +|.++++.++..+.+.
T Consensus 93 ~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp TSCEEEEEECTTSCEEEEE
T ss_pred CcceEEEEcCCCCeEEEEE
Confidence 4 5888887655444333
No 37
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.62 E-value=8.8e-08 Score=89.36 Aligned_cols=81 Identities=16% Similarity=0.188 Sum_probs=62.1
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCC-CCEEEEe
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIYVAD 121 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~-G~iyVaD 121 (191)
+..|++|+++|.++.||++|.++ ++|+++++ +|....... ...+..|.||++|++ +.||++|
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~~~I~~~~~----dG~~~~~l~------------~~~l~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL----NGVDIYSLV------------TENIQWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSSCCEEBCCS----SSCCCCEES------------CSSCSSCCCEEECTTTCCEEEEE
T ss_pred CCCcceEEEccCCCcEEEcccCCCCeEEEEeC----CCCCeeEEE------------eCCCCCccEEEEeccCCEEEEEe
Confidence 46899999976789999999876 89999875 443222221 124678999999965 7899999
Q ss_pred CCCCEEEEEeCCCCCceEE
Q 029556 122 KSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 122 ~~n~rIr~i~~~~~~~~~i 140 (191)
+.+++|++++..+...+++
T Consensus 559 ~~~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 559 SKLHSISSIDVNGGNRKTI 577 (699)
T ss_dssp TTTTEEEEECSSSSCCEEE
T ss_pred cCCCeEEEEccCCCceEEE
Confidence 9999999999976443443
No 38
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.61 E-value=1.1e-06 Score=72.91 Aligned_cols=73 Identities=15% Similarity=0.015 Sum_probs=58.5
Q ss_pred CCCeeeEEEecC-CCeEEEEeCCC-----------------CeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCC
Q 029556 44 EINPHSVIDRPG-SSDLIVLDSSR-----------------SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDK 105 (191)
Q Consensus 44 ~~~P~gIav~d~-~g~lyVaD~~n-----------------~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~ 105 (191)
+..|++++++ + +|++||+|..+ ++|++++. .++++..+.. .+..
T Consensus 125 ~~~p~~i~~d-~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~~~~~~--------------~~~~ 186 (322)
T 2fp8_A 125 FKWLYAVTVD-QRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKETTLLLK--------------ELHV 186 (322)
T ss_dssp CSCEEEEEEC-TTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEEEEEEE--------------EESC
T ss_pred ccccceEEEe-cCCCEEEEECCcccccccccceehcccCCCceEEEEeC---CCCEEEEecc--------------CCcc
Confidence 4679999995 6 89999999763 57888874 2455555432 3568
Q ss_pred CceEEEcCCCC-EEEEeCCCCEEEEEeCCC
Q 029556 106 PKSFAVDMKGN-IYVADKSNHVIRKITNLD 134 (191)
Q Consensus 106 P~gIavD~~G~-iyVaD~~n~rIr~i~~~~ 134 (191)
|.||+++++|+ +||+|+.+++|++++..+
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 99999999986 999999999999999875
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.60 E-value=2.6e-07 Score=73.59 Aligned_cols=73 Identities=22% Similarity=0.335 Sum_probs=58.1
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|.+|+++ ++|++||++..+++|++++. ++....... ...+..|.++++|++|++|++|..+
T Consensus 192 ~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~----~~~~~~~~~------------~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 192 TAPWGIAVD-EAGTVYVTEHNTNQVVKLLA----GSTTSTVLP------------FTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSEEEEEEC-TTCCEEEEETTTSCEEEECT----TCSCCEECC------------CCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCceEEEEC-CCCCEEEEECCCCcEEEEcC----CCCcceeec------------cCCCCCceeEEECCCCCEEEEECCC
Confidence 689999995 77899999999999999984 333222211 1125689999999999999999999
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
++|++++...
T Consensus 255 ~~v~~~~~~~ 264 (270)
T 1rwi_B 255 DRVVKLTSLE 264 (270)
T ss_dssp TEEEEECCCG
T ss_pred CEEEEEcCCC
Confidence 9999998754
No 40
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.56 E-value=5.8e-06 Score=67.18 Aligned_cols=99 Identities=14% Similarity=0.148 Sum_probs=67.6
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceE---EEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV---KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v---~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
..|++++++ ++++++++|+.+++|++++.+ .+|.+ .... .. ....|.+|++|++|++|+++
T Consensus 172 ~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~--~~g~~~~~~~~~-~~------------~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 172 VKPNGLAFL-PSGNLLVSDTGDNATHRYCLN--ARGETEYQGVHF-TV------------EPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp SSEEEEEEC-TTSCEEEEETTTTEEEEEEEC--SSSCEEEEEEEE-CC------------SSSCCCSEEEBTTSCEEEEE
T ss_pred CCCccEEEC-CCCCEEEEeCCCCeEEEEEEC--CCCcCcCCCeEe-eC------------CCCCCCeEEECCCCCEEEEc
Confidence 589999996 556555999999999999863 24554 2222 11 12369999999999999999
Q ss_pred CCCCEEEEEeCCCCCceEEEEeccC--CCceEeccCCCCccEEEEE
Q 029556 122 KSNHVIRKITNLDHGNQLIRQINLK--PEDCSKSSQSGSGMFWVTV 165 (191)
Q Consensus 122 ~~n~rIr~i~~~~~~~~~i~~i~~~--~~~~~~~~~~g~~~~~~~~ 165 (191)
+++|+++++++. .+..+..+ +..+++... .-..+|+.+
T Consensus 236 --~~~v~~~~~~g~---~~~~~~~~~~~~~~~f~~~-d~~~L~v~t 275 (296)
T 3e5z_A 236 --GDGVHVLTPDGD---ELGRVLTPQTTSNLCFGGP-EGRTLYMTV 275 (296)
T ss_dssp --TTEEEEECTTSC---EEEEEECSSCCCEEEEEST-TSCEEEEEE
T ss_pred --CCeEEEECCCCC---EEEEEECCCCceeEEEECC-CCCEEEEEc
Confidence 789999999753 44444433 455666422 223466654
No 41
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.55 E-value=2e-07 Score=86.98 Aligned_cols=76 Identities=21% Similarity=0.192 Sum_probs=60.8
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc-eEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES-VVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g-~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
+..|+||++++.++.||++|..+++|+++++ +| ..+.++.. ...+.+|.||++|.+ .+|++|+
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~----dG~~~~~~~~~-----------~~~~~~P~glavd~~-~lywtd~ 602 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDV----NGGNRKTILED-----------EKRLAHPFSLAVFED-KVFWTDI 602 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECS----SSSCCEEECCC-----------SSSCSSCCCCEEETT-EEEEECS
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEcc----CCCceEEEEec-----------CCcCCCceEeEEECC-EEEEEeC
Confidence 4689999997678999999999999999986 33 23333321 134678999999974 8999999
Q ss_pred CCCEEEEEeCCCC
Q 029556 123 SNHVIRKITNLDH 135 (191)
Q Consensus 123 ~n~rIr~i~~~~~ 135 (191)
.+++|+++++.++
T Consensus 603 ~~~~V~~~d~~~G 615 (699)
T 1n7d_A 603 INEAIFSANRLTG 615 (699)
T ss_dssp TTTCEEEEETTTE
T ss_pred CCCeEEEEEccCC
Confidence 9999999998654
No 42
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.50 E-value=8.9e-06 Score=64.99 Aligned_cols=73 Identities=10% Similarity=0.132 Sum_probs=59.6
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|++++++ +++++|+++..+++|++++. +++...+... ..+..|.+|++|++|++|+++..
T Consensus 145 ~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~----~g~~~~~~~~------------~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 145 GSYPAFITLG-SDNALWFTENQNNSIGRITN----TGKLEEYPLP------------TNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp TCCEEEEEEC-TTSSEEEEETTTTEEEEECT----TCCEEEEECS------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCceeEEEC-CCCCEEEEecCCCeEEEECC----CCcEEEeeCC------------CCCCCcceEEECCCCCEEEEccC
Confidence 4689999995 78889999999999999974 5665554311 12457999999999999999999
Q ss_pred CCEEEEEeCC
Q 029556 124 NHVIRKITNL 133 (191)
Q Consensus 124 n~rIr~i~~~ 133 (191)
+++|.++++.
T Consensus 208 ~~~i~~~~~~ 217 (300)
T 2qc5_A 208 GNKIGRITTT 217 (300)
T ss_dssp TTEEEEECTT
T ss_pred CCEEEEEcCC
Confidence 9999999984
No 43
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.49 E-value=8.4e-07 Score=74.68 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=69.5
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|++|+++|++..||+++...+++++++.+...++.. +..... . ..........|.||++|++|++|++|+.+
T Consensus 195 ~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~----~~~~~~-~-~~~~~g~~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 195 LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL----TDAELG-S-KIERYSEKPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC----CHHHHH-T-TCEEEEECCSCSCEEECTTCCEEEEEGGG
T ss_pred cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC----Chhhhh-c-ceEecccCCCCceEEECCCCCEEEEccCC
Confidence 35899999866668999999999999997421111110 000000 0 00000112379999999999999999999
Q ss_pred CEEEEEeCCCCCceEEEEec-cC-CCceEeccCCCCccEEEEEe
Q 029556 125 HVIRKITNLDHGNQLIRQIN-LK-PEDCSKSSQSGSGMFWVTVF 166 (191)
Q Consensus 125 ~rIr~i~~~~~~~~~i~~i~-~~-~~~~~~~~~~g~~~~~~~~~ 166 (191)
++|.+++++++...++.... +. ++++++.+ -+.+|+...
T Consensus 269 ~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~---~g~l~v~~~ 309 (343)
T 2qe8_A 269 SAIGVITSADRAYKLLVTDEKLSWTDSFNFGS---DGYLYFDCN 309 (343)
T ss_dssp TEEEEEETTTTEEEEEEECGGGSCEEEEEECT---TSCEEEEEC
T ss_pred CeEEEEECCCCCEEEEEECCceecCCeeEECC---CCcEEEEeC
Confidence 99999999443233333322 22 45666643 245776654
No 44
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.49 E-value=3.7e-06 Score=67.25 Aligned_cols=74 Identities=11% Similarity=0.179 Sum_probs=60.4
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|.+++++ +++++|+++..+++|.+++. +|....+... ..+..|.+|++|++|++|+++..
T Consensus 187 ~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~----~g~~~~~~~~------------~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 187 AAAPVGITSG-NDGALWFVEIMGNKIGRITT----TGEISEYDIP------------TPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp TCCEEEEEEC-TTSSEEEEETTTTEEEEECT----TCCEEEEECS------------STTCCEEEEEECSTTCEEEEETT
T ss_pred CCCcceEEEC-CCCCEEEEccCCCEEEEEcC----CCcEEEEECC------------CCCCCceEEEECCCCCEEEeccC
Confidence 3589999995 78899999999999999974 5665554311 12457999999999999999999
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
+++|.++++.+
T Consensus 250 ~~~i~~~~~~g 260 (300)
T 2qc5_A 250 ANQIGRITNDN 260 (300)
T ss_dssp TTEEEEECTTS
T ss_pred CCeEEEECCCC
Confidence 99999999943
No 45
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.43 E-value=8.2e-06 Score=67.12 Aligned_cols=104 Identities=20% Similarity=0.270 Sum_probs=72.4
Q ss_pred eeeccCccE-Ee-cCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCC
Q 029556 18 LFSLVSSGL-LL-EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSD 95 (191)
Q Consensus 18 ~~~~~~g~l-~~-~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~D 95 (191)
++..+++.+ +. ++| ..+.+... ...|++++++ .+|++|+++..+++|.+++. +|+++.++...
T Consensus 61 ~~d~~~~~i~~~~~~g-~~~~~~~~---~~~~~gl~~d-~dG~l~v~~~~~~~v~~~~~----~g~~~~~~~~~------ 125 (305)
T 3dr2_A 61 WSDLVGRRVLGWREDG-TVDVLLDA---TAFTNGNAVD-AQQRLVHCEHGRRAITRSDA----DGQAHLLVGRY------ 125 (305)
T ss_dssp EEETTTTEEEEEETTS-CEEEEEES---CSCEEEEEEC-TTSCEEEEETTTTEEEEECT----TSCEEEEECEE------
T ss_pred EEECCCCEEEEEeCCC-CEEEEeCC---CCccceeeEC-CCCCEEEEECCCCEEEEECC----CCCEEEEEecc------
Confidence 345555555 22 344 34444332 2479999995 78999999999999999984 57777665321
Q ss_pred CCCcccccCCCceEEEcCCCCEEEEeC-----------------CCCEEEEEeCCCCCceE
Q 029556 96 GEPGSARFDKPKSFAVDMKGNIYVADK-----------------SNHVIRKITNLDHGNQL 139 (191)
Q Consensus 96 G~~~~a~f~~P~gIavD~~G~iyVaD~-----------------~n~rIr~i~~~~~~~~~ 139 (191)
....++.|.++++|++|++|++|. ....|.++++.++..+.
T Consensus 126 ---~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~ 183 (305)
T 3dr2_A 126 ---AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR 183 (305)
T ss_dssp ---TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred ---CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence 123578899999999999999974 23689999986554433
No 46
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.41 E-value=3.4e-06 Score=72.10 Aligned_cols=88 Identities=14% Similarity=0.218 Sum_probs=67.3
Q ss_pred cCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCce
Q 029556 29 EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKS 108 (191)
Q Consensus 29 ~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~g 108 (191)
.+.+.+++++++.. .|.+|+++ ++|++||+|.. ++|++++ +|+...+++... . ...+..|.|
T Consensus 18 ~~~~~~~~va~~l~---~P~~ia~~-pdG~l~V~e~~-g~I~~i~-----~g~~~~~~~~~v--~------~~g~~~p~g 79 (352)
T 2ism_A 18 GQGLRVEEVVGGLE---VPWALAFL-PDGGMLIAERP-GRIRLFR-----EGRLSTYAELSV--Y------HRGESGLLG 79 (352)
T ss_dssp --CCCEEEEECCCS---CEEEEEEC-TTSCEEEEETT-TEEEEEE-----TTEEEEEEECCC--C------CSTTCSEEE
T ss_pred cCCcEEEEEECCCC---CceEEEEc-CCCeEEEEeCC-CeEEEEE-----CCCccEeecceE--e------ecCCCCcee
Confidence 46789999998755 99999995 78899999987 8999997 466666554321 1 112457999
Q ss_pred EEEcCC----CCEEEEeCCC-----CEEEEEeCCC
Q 029556 109 FAVDMK----GNIYVADKSN-----HVIRKITNLD 134 (191)
Q Consensus 109 IavD~~----G~iyVaD~~n-----~rIr~i~~~~ 134 (191)
|+++++ |.+|+++..+ ++|.+++..+
T Consensus 80 ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLG 114 (352)
T ss_dssp EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECS
T ss_pred EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCC
Confidence 999997 8999999865 7999999864
No 47
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.37 E-value=2.8e-06 Score=72.85 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=68.8
Q ss_pred EEecCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCC
Q 029556 26 LLLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDK 105 (191)
Q Consensus 26 l~~~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~ 105 (191)
...++++.+++++++.. .|.+|+++ ++|+|||+|.. ++|++++ ++|. +.+.+... .. .....
T Consensus 13 ~~~~~~~~~~~va~~l~---~P~~ia~~-pdG~l~V~e~~-g~I~~~d----~~G~-~~~~~~~v--~~------~g~~g 74 (354)
T 3a9g_A 13 PSEEWKFKISEVASDLE---VPWSIAPL-GGGRYLVTERP-GRLVLIS----PSGK-KLVASFDV--AN------VGEAG 74 (354)
T ss_dssp ---CCCEEEEEEECSCS---CEEEEEEE-ETTEEEEEETT-TEEEEEC----SSCE-EEEEECCC--CC------STTCS
T ss_pred CCCCCCeEEEEEeCCCC---CCeEEEEc-CCCeEEEEeCC-CEEEEEe----CCCc-eEeeccce--ee------cCCCc
Confidence 45568999999998755 99999996 68899999987 8999996 4676 55554321 01 12347
Q ss_pred CceEEEcCC----CCEEEEeCC---C----CEEEEEeCCCC
Q 029556 106 PKSFAVDMK----GNIYVADKS---N----HVIRKITNLDH 135 (191)
Q Consensus 106 P~gIavD~~----G~iyVaD~~---n----~rIr~i~~~~~ 135 (191)
|.||+++++ |.|||++.. + ++|.+++..+.
T Consensus 75 ~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 75 LLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred eeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 999999986 899999874 4 78999997654
No 48
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.35 E-value=5.4e-06 Score=67.35 Aligned_cols=90 Identities=11% Similarity=0.147 Sum_probs=69.0
Q ss_pred EecCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCC
Q 029556 27 LLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKP 106 (191)
Q Consensus 27 ~~~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P 106 (191)
.+.++..++.+.++.. .|+++++++.++.+|+++..+++|++++. ..+ ...+... ...|
T Consensus 13 ~~~~~~~~~~l~~~~~---~~eg~~~d~~g~~l~~~~~~~~~i~~~~~---~~~-~~~~~~~--------------~~~~ 71 (296)
T 3e5z_A 13 LFPAGAEARRLADGFT---WTEGPVYVPARSAVIFSDVRQNRTWAWSD---DGQ-LSPEMHP--------------SHHQ 71 (296)
T ss_dssp GSCTTCCCEEEECCCS---SEEEEEEEGGGTEEEEEEGGGTEEEEEET---TSC-EEEEESS--------------CSSE
T ss_pred hcCCCCcEEEEecCCc---cccCCeEeCCCCEEEEEeCCCCEEEEEEC---CCC-eEEEECC--------------CCCc
Confidence 3456667788877655 89999997444449999999999999985 233 5554421 1368
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeCCCCCc
Q 029556 107 KSFAVDMKGNIYVADKSNHVIRKITNLDHGN 137 (191)
Q Consensus 107 ~gIavD~~G~iyVaD~~n~rIr~i~~~~~~~ 137 (191)
.++++|++|++|+++.++++|.++++.++..
T Consensus 72 ~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 72 NGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp EEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred ceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 9999999999999999999999999955433
No 49
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.34 E-value=7e-05 Score=59.64 Aligned_cols=72 Identities=10% Similarity=0.107 Sum_probs=59.2
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|++++++ +++++|+++..++.|++++. ++++..+... ..+..|.++++|++|++|+++..
T Consensus 140 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~----~g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 140 GSYPSFITLG-SDNALWFTENQNNAIGRITE----SGDITEFKIP------------TPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECT----TCCEEEEECS------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCCceEEEc-CCCCEEEEeCCCCEEEEEcC----CCcEEEeeCC------------CCCCcceeEEECCCCCEEEEccC
Confidence 3579999995 78899999999999999973 5666554321 12457999999999999999999
Q ss_pred CCEEEEEeC
Q 029556 124 NHVIRKITN 132 (191)
Q Consensus 124 n~rIr~i~~ 132 (191)
+++|.++++
T Consensus 203 ~~~i~~~~~ 211 (299)
T 2z2n_A 203 GNKIGRITT 211 (299)
T ss_dssp TTEEEEECT
T ss_pred CceEEEECC
Confidence 999999999
No 50
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.33 E-value=1.4e-05 Score=63.74 Aligned_cols=73 Identities=7% Similarity=0.136 Sum_probs=59.3
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|.+++++ +++++|+++..+++|++++. ++.+..+... .....|.+|++|++|++|+++..
T Consensus 182 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~----~g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 182 ASGPVGITKG-NDDALWFVEIIGNKIGRITT----SGEITEFKIP------------TPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp TCCEEEEEEC-TTSSEEEEETTTTEEEEECT----TCCEEEEECS------------STTCCEEEEEECSTTCEEEEETT
T ss_pred CCcceeEEEC-CCCCEEEEccCCceEEEECC----CCcEEEEECC------------CCCCCceeEEECCCCCEEEeccC
Confidence 3579999995 77899999999999999984 5655544211 12457999999999999999999
Q ss_pred CCEEEEEeCC
Q 029556 124 NHVIRKITNL 133 (191)
Q Consensus 124 n~rIr~i~~~ 133 (191)
+++|.++++.
T Consensus 245 ~~~i~~~d~~ 254 (299)
T 2z2n_A 245 ANKIGRLTSN 254 (299)
T ss_dssp TTEEEEEETT
T ss_pred CceEEEECCC
Confidence 9999999994
No 51
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.26 E-value=1.6e-05 Score=66.46 Aligned_cols=87 Identities=10% Similarity=0.121 Sum_probs=61.5
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc-eE---EEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES-VV---KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA 120 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g-~v---~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVa 120 (191)
..|+++++++++..+|++|+.+++|++++.+. .+| .+ ..+.... .....|.++++|++|++|++
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~-~~Gl~~~~~~~~~~~~-----------~~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA-RTGLPTGKAEVFIDST-----------GIKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCT-TTCCBSSCCEEEEECT-----------TSSSEEEEEEECTTSCEEEE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEccc-ccCCcccCceEEEECC-----------CCCCCCCeeEECCCCCEEEE
Confidence 37999999755557999999999999998631 134 21 1222110 01135899999999999999
Q ss_pred eCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 121 DKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 121 D~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
.+++++|.++++.+ +.++.+.++
T Consensus 247 ~~~~~~v~~~d~~g---~~~~~i~~~ 269 (326)
T 2ghs_A 247 RWGEGAVDRYDTDG---NHIARYEVP 269 (326)
T ss_dssp EETTTEEEEECTTC---CEEEEEECS
T ss_pred EeCCCEEEEECCCC---CEEEEEECC
Confidence 99889999999954 345555554
No 52
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.25 E-value=8.1e-05 Score=62.10 Aligned_cols=105 Identities=10% Similarity=0.083 Sum_probs=70.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC-
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS- 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~- 123 (191)
..|++++++ +++.+||++..+++|.++|. .++++......+. ...+...|.+|++ .++.+|+++++
T Consensus 84 ~~p~~i~~~-~~g~lyv~~~~~~~v~~iD~---~t~~~~~~i~~g~--------~~~~~~~p~~i~~-~~~~lyv~~~~~ 150 (328)
T 3dsm_A 84 TSPRYIHFL-SDEKAYVTQIWDYRIFIINP---KTYEITGYIECPD--------MDMESGSTEQMVQ-YGKYVYVNCWSY 150 (328)
T ss_dssp SSEEEEEEE-ETTEEEEEEBSCSEEEEEET---TTTEEEEEEECTT--------CCTTTCBCCCEEE-ETTEEEEEECTT
T ss_pred CCCcEEEEe-CCCeEEEEECCCCeEEEEEC---CCCeEEEEEEcCC--------ccccCCCcceEEE-ECCEEEEEcCCC
Confidence 589999996 45699999988899999996 4566543332211 1234568999999 47899999985
Q ss_pred CCEEEEEeCCCCCceEEEEeccC--CCceEeccCCCCccEEEEEec
Q 029556 124 NHVIRKITNLDHGNQLIRQINLK--PEDCSKSSQSGSGMFWVTVFS 167 (191)
Q Consensus 124 n~rIr~i~~~~~~~~~i~~i~~~--~~~~~~~~~~g~~~~~~~~~~ 167 (191)
+++|.+++++++ +.++.+... +.+....+ -|.+|+...+
T Consensus 151 ~~~v~viD~~t~--~~~~~i~~g~~p~~i~~~~---dG~l~v~~~~ 191 (328)
T 3dsm_A 151 QNRILKIDTETD--KVVDELTIGIQPTSLVMDK---YNKMWTITDG 191 (328)
T ss_dssp CCEEEEEETTTT--EEEEEEECSSCBCCCEECT---TSEEEEEBCC
T ss_pred CCEEEEEECCCC--eEEEEEEcCCCccceEEcC---CCCEEEEECC
Confidence 889999999765 344444433 33444322 2346665544
No 53
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.22 E-value=2.1e-05 Score=64.70 Aligned_cols=84 Identities=12% Similarity=0.024 Sum_probs=67.2
Q ss_pred CCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceE
Q 029556 30 DGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSF 109 (191)
Q Consensus 30 dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gI 109 (191)
.+..++++.+|.. .|++++++++++.||++|..+++|++++. +|....+... -..|.++
T Consensus 33 ~~~~~~~l~~~~~---~~egp~~~~~g~~l~~~d~~~~~i~~~~~----~g~~~~~~~~--------------~~~~~gl 91 (305)
T 3dr2_A 33 GDARLLTLYDQAT---WSEGPAWWEAQRTLVWSDLVGRRVLGWRE----DGTVDVLLDA--------------TAFTNGN 91 (305)
T ss_dssp TTCCCEEEECCCS---SEEEEEEEGGGTEEEEEETTTTEEEEEET----TSCEEEEEES--------------CSCEEEE
T ss_pred CCCceEEEecCCc---CccCCeEeCCCCEEEEEECCCCEEEEEeC----CCCEEEEeCC--------------CCcccee
Confidence 3457788887765 89999997555569999999999999974 5666555421 1258999
Q ss_pred EEcCCCCEEEEeCCCCEEEEEeCCC
Q 029556 110 AVDMKGNIYVADKSNHVIRKITNLD 134 (191)
Q Consensus 110 avD~~G~iyVaD~~n~rIr~i~~~~ 134 (191)
++|++|++|+++.++++|.++++++
T Consensus 92 ~~d~dG~l~v~~~~~~~v~~~~~~g 116 (305)
T 3dr2_A 92 AVDAQQRLVHCEHGRRAITRSDADG 116 (305)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTS
T ss_pred eECCCCCEEEEECCCCEEEEECCCC
Confidence 9999999999999999999999863
No 54
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.22 E-value=2.1e-05 Score=66.02 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=60.6
Q ss_pred CCCCeeeEEEecCCCeEEEEeCC-----CCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCC
Q 029556 43 LEINPHSVIDRPGSSDLIVLDSS-----RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGN 116 (191)
Q Consensus 43 ~~~~P~gIav~d~~g~lyVaD~~-----n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~ 116 (191)
.+..|++|+++ ++++|||+|.+ .++|.++|+ .+|++......+... ......|.++++|+ .|.
T Consensus 65 ~~~~p~gv~~d-~~g~L~v~D~g~~~~~~~~i~~~d~---~tg~~~~~~~~~~~~-------~~~~~~~~~v~vd~~~g~ 133 (343)
T 2qe8_A 65 TFDTVLGIKSD-GNGIVWMLDNGNQSKSVPKLVAWDT---LNNQLSRVIYLPPPI-------TLSNSFVNDLAVDLIHNF 133 (343)
T ss_dssp CCSCEEEEEEC-SSSEEEEEECHHHHTSCCEEEEEET---TTTEEEEEEECCTTT-------SCTTCCCCEEEEETTTTE
T ss_pred ceeEeeEEEEc-CCCcEEEEcCCCCcCCCCeEEEEEC---CCCeEEEEEECChhh-------cccccccceEEEecCCCE
Confidence 35799999995 77999999988 589999986 357643333221100 11235789999996 479
Q ss_pred EEEEeC---CCCEEEEEeCCCC
Q 029556 117 IYVADK---SNHVIRKITNLDH 135 (191)
Q Consensus 117 iyVaD~---~n~rIr~i~~~~~ 135 (191)
+|++|. .++.|.++++.++
T Consensus 134 ~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 134 VYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp EEEEECCSGGGCEEEEEETTTC
T ss_pred EEEEcCccCCCCeEEEEECCCC
Confidence 999999 8899999998654
No 55
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.19 E-value=3e-05 Score=62.64 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=57.3
Q ss_pred CCeeeEEEe----cCCCeEEEEeCCCCeEEEEecCCCCCceEE---EEecCCCccCCCCCCcccccCCCceEEEcCCCCE
Q 029556 45 INPHSVIDR----PGSSDLIVLDSSRSAFYTLSFPLSEESVVK---RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNI 117 (191)
Q Consensus 45 ~~P~gIav~----d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~---~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~i 117 (191)
..|++++++ +++..+|+++..+++|++++.+ .+|.+. .+.... + ..+..|.++++|++|++
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~--~~g~~~~~~~~~~~~------~----~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK--GPAKIENKKVWGHIP------G----THEGGADGMDFDEDNNL 239 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE--ETTEEEEEEEEEECC------C----CSSCEEEEEEEBTTCCE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECC--CCCccccceEEEECC------C----CCCCCCCceEECCCCCE
Confidence 479999996 5555799999999999999852 134322 222111 0 01246899999999999
Q ss_pred EEEeCCCCEEEEEeCC
Q 029556 118 YVADKSNHVIRKITNL 133 (191)
Q Consensus 118 yVaD~~n~rIr~i~~~ 133 (191)
|+++..+++|.++++.
T Consensus 240 ~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEETTTEEEEECTT
T ss_pred EEEEcCCCEEEEEcCC
Confidence 9999989999999997
No 56
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.11 E-value=2.9e-05 Score=66.76 Aligned_cols=120 Identities=20% Similarity=0.150 Sum_probs=77.7
Q ss_pred eeeeeeeccCccE--EecC-CcEEEEEEcCcc----CCCCeeeEEEe--cCCCeEEE-EeC------------CCCeEEE
Q 029556 14 LLSLLFSLVSSGL--LLED-GYTVTTVIDGHQ----LEINPHSVIDR--PGSSDLIV-LDS------------SRSAFYT 71 (191)
Q Consensus 14 ~~~~~~~~~~g~l--~~~d-Gy~~~~~~~G~~----~~~~P~gIav~--d~~g~lyV-aD~------------~n~~I~~ 71 (191)
+.|++.++-++.+ .-++ +.......++.. -..+|.||.++ |+.+.|+| +|. +.+.+.+
T Consensus 25 g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~ 104 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHS 104 (334)
T ss_dssp TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEE
T ss_pred CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEE
Confidence 4677888888988 4444 433333333311 12368999993 35688887 663 4688999
Q ss_pred EecCCCCCceEEEEecCCC--ccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC-CEEEEEeCCCC
Q 029556 72 LSFPLSEESVVKRLAGDGV--QGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN-HVIRKITNLDH 135 (191)
Q Consensus 72 ~d~~~~~~g~v~~~aG~~~--~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n-~rIr~i~~~~~ 135 (191)
+|++...+++..+.+.-.. .++. ......+..|.+|++|++||+||+|+.. ..|.|+++.+.
T Consensus 105 ~Dl~~~~tg~~~~~~dL~~~~~~~~--~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 105 FNLPLSENSKPVWSVNFEKVQDEFE--KKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp EESSCCTTCCCSEEEESHHHHHHHH--HHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred EcCCcCCCCCEEEEecCcccccccc--ccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 9973322566666654210 0000 0000134468999999999999999999 99999999875
No 57
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.08 E-value=0.00016 Score=61.61 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=55.9
Q ss_pred CCeeeEEEecC---CCeEEEEeCCC-----CeEEEEecCCCCCc---eEEEEe-cCCCccCCCCCCcccccCCCceEEEc
Q 029556 45 INPHSVIDRPG---SSDLIVLDSSR-----SAFYTLSFPLSEES---VVKRLA-GDGVQGYSDGEPGSARFDKPKSFAVD 112 (191)
Q Consensus 45 ~~P~gIav~d~---~g~lyVaD~~n-----~~I~~~d~~~~~~g---~v~~~a-G~~~~G~~DG~~~~a~f~~P~gIavD 112 (191)
..|.+|+++|+ ++.+||+++.+ ++|.+++.+ ++ ..+.+. +.+. .......|.+|+++
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~---~~~~~~~~~l~~~~p~--------~~~~~h~~~~l~~~ 143 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL---GERGVLDRVVLDGIPA--------RPHGLHSGGRIAFG 143 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC---SSCEEEEEEEEEEECC--------CTTCCCCCCCEEEC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC---CCCcCceEEEEEeCCC--------CCCCCcCCceEEEC
Confidence 58999999755 58999999865 899999863 22 222222 2211 01234578999999
Q ss_pred CCCCEEEEeC-------------CCCEEEEEeCCC
Q 029556 113 MKGNIYVADK-------------SNHVIRKITNLD 134 (191)
Q Consensus 113 ~~G~iyVaD~-------------~n~rIr~i~~~~ 134 (191)
++|.|||++. .+++|.++++++
T Consensus 144 pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 144 PDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp TTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred CCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 9999999973 236899999865
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.07 E-value=4.4e-05 Score=62.55 Aligned_cols=90 Identities=14% Similarity=0.192 Sum_probs=60.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
..|+++++++++..+|+++..+++|++++.+ .+|. ...+........ . ....|.++++|++|++|+++..
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~--~~g~~~~~~~~~~~~~~-~------~~~~~~~i~~d~~G~l~v~~~~ 252 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETTANRLHRIALE--DDGVTIQPFGATIPYYF-T------GHEGPDSCCIDSDDNLYVAMYG 252 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEEC--TTSSSEEEEEEEEEEEC-C------SSSEEEEEEEBTTCCEEEEEET
T ss_pred CcccceEECCCCCEEEEEeCCCCeEEEEEec--CCCcCcccccceEEEec-C------CCCCCCceEECCCCCEEEEEcC
Confidence 3699999974444699999999999999863 2332 322210000000 0 0136899999999999999998
Q ss_pred CCEEEEEeCCCCCceEEEEeccC
Q 029556 124 NHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 124 n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
+++|+++++++. .++.+..+
T Consensus 253 ~~~v~~~d~~g~---~~~~~~~~ 272 (333)
T 2dg1_A 253 QGRVLVFNKRGY---PIGQILIP 272 (333)
T ss_dssp TTEEEEECTTSC---EEEEEECT
T ss_pred CCEEEEECCCCC---EEEEEEcC
Confidence 899999998543 44444443
No 59
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.06 E-value=1.4e-05 Score=68.37 Aligned_cols=93 Identities=8% Similarity=0.034 Sum_probs=64.6
Q ss_pred EEecCCcEEEEEEcCccCCCCeeeEEEecCCCe-EEEEeCCCCeEEEEecCCCCCceEE-EEecCCCccCCCCCCccccc
Q 029556 26 LLLEDGYTVTTVIDGHQLEINPHSVIDRPGSSD-LIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARF 103 (191)
Q Consensus 26 l~~~dGy~~~~~~~G~~~~~~P~gIav~d~~g~-lyVaD~~n~~I~~~d~~~~~~g~v~-~~aG~~~~G~~DG~~~~a~f 103 (191)
+.+|+|+.+++++++.. +|.+|+++ ++|+ +||++.. ++|++++ .+|... .+++...- . ....
T Consensus 2 ~~~p~g~~~~~va~~l~---~P~~i~~~-pdG~~l~V~e~~-G~i~~~~----~~g~~~~~~~~~~~v-~------~~g~ 65 (353)
T 2g8s_A 2 AMAPATVNVEVLQDKLD---HPWALAFL-PDNHGMLITLRG-GELRHWQ----AGKGLSAPLSGVPDV-W------AHGQ 65 (353)
T ss_dssp ----CCSEEEEEEEEES---SEEEEEEC-STTCCEEEEETT-TEEEEEE----TTTEECCCCBSCCCC-C------CSTT
T ss_pred CCCCCCcEEEEEECCCC---CcEEEEEc-CCCCEEEEEeCC-ceEEEEe----CCCceeeEecCCccc-c------cCCC
Confidence 46789999999998765 99999995 7888 9999975 7999997 356543 23322110 0 0112
Q ss_pred CCCceEEEcC----CCCEEEEeCC-------CCEEEEEeCCC
Q 029556 104 DKPKSFAVDM----KGNIYVADKS-------NHVIRKITNLD 134 (191)
Q Consensus 104 ~~P~gIavD~----~G~iyVaD~~-------n~rIr~i~~~~ 134 (191)
..|.||++++ +|.+|++++. +++|.+++.++
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~ 107 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSD 107 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECT
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECC
Confidence 3678999998 5899999865 46898887753
No 60
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.05 E-value=2.8e-05 Score=69.00 Aligned_cols=95 Identities=14% Similarity=0.205 Sum_probs=69.9
Q ss_pred EecCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCC
Q 029556 27 LLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKP 106 (191)
Q Consensus 27 ~~~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P 106 (191)
..++|+.+++++++.. +|.+|+++ ++|++||++...++|++++. .+|....+...... ... ......+
T Consensus 12 ~~~~gf~~~~~a~~l~---~P~~~a~~-pdG~l~V~e~~gg~I~~~~~---~~g~~~~~~~~~~~-~~~----~~g~~Gl 79 (454)
T 1cru_A 12 AKSENFDKKVILSNLN---KPHALLWG-PDNQIWLTERATGKILRVNP---ESGSVKTVFQVPEI-VND----ADGQNGL 79 (454)
T ss_dssp CCCTTSCEEEEECCCS---SEEEEEEC-TTSCEEEEETTTCEEEEECT---TTCCEEEEEECTTC-CCC----TTSSCSE
T ss_pred CCCCCeEEEEEECCCC---CceEEEEc-CCCcEEEEEcCCCEEEEEEC---CCCcEeEEecCCcc-ccc----cCCCCce
Confidence 4678999999998865 99999995 78999999998889999973 35766666543210 000 0012357
Q ss_pred ceEEEcC----CCCEEEEeCC------------CCEEEEEeCC
Q 029556 107 KSFAVDM----KGNIYVADKS------------NHVIRKITNL 133 (191)
Q Consensus 107 ~gIavD~----~G~iyVaD~~------------n~rIr~i~~~ 133 (191)
.||++++ +|.||++++. ..+|.+++..
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~ 122 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYN 122 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEEC
Confidence 7999998 7899999864 4689888864
No 61
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.99 E-value=0.00036 Score=57.06 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=64.1
Q ss_pred CcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEE
Q 029556 31 GYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFA 110 (191)
Q Consensus 31 Gy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIa 110 (191)
+.....+.++. ..|++++++ +++++|+++..++.|++++. .++++..+.... -..|.+++
T Consensus 34 ~~~~~~~~~~~---~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~---~~~~~~~~~~~~-------------~~~~~~i~ 93 (333)
T 2dg1_A 34 AEPWLEISKKG---LQLEGLNFD-RQGQLFLLDVFEGNIFKINP---ETKEIKRPFVSH-------------KANPAAIK 93 (333)
T ss_dssp CEEEEEEESSC---CCEEEEEEC-TTSCEEEEETTTCEEEEECT---TTCCEEEEEECS-------------SSSEEEEE
T ss_pred cceeEEEeccC---ccccCcEEC-CCCCEEEEECCCCEEEEEeC---CCCcEEEEeeCC-------------CCCcceEE
Confidence 33444444433 479999995 78899999999999999985 345555443110 13689999
Q ss_pred EcCCCCEEEEeCCC----CEEEEEeCCCCCc
Q 029556 111 VDMKGNIYVADKSN----HVIRKITNLDHGN 137 (191)
Q Consensus 111 vD~~G~iyVaD~~n----~rIr~i~~~~~~~ 137 (191)
+|++|++|+++..+ ++|.+++++++..
T Consensus 94 ~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 94 IHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp ECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred ECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 99999999999877 7999999876543
No 62
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.99 E-value=0.00045 Score=57.48 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=56.4
Q ss_pred CeeeEEEecCCCeEEEEeCC-CCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~-n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.|++|++ .++.+||++.+ .++|.++|. .++++......+ ..|.++++|++|.+|++..++
T Consensus 132 ~p~~i~~--~~~~lyv~~~~~~~~v~viD~---~t~~~~~~i~~g--------------~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 132 STEQMVQ--YGKYVYVNCWSYQNRILKIDT---ETDKVVDELTIG--------------IQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp BCCCEEE--ETTEEEEEECTTCCEEEEEET---TTTEEEEEEECS--------------SCBCCCEECTTSEEEEEBCCB
T ss_pred CcceEEE--ECCEEEEEcCCCCCEEEEEEC---CCCeEEEEEEcC--------------CCccceEEcCCCCEEEEECCC
Confidence 8999999 48899999984 889999986 355544333211 268999999999999999876
Q ss_pred ----------CEEEEEeCCCC
Q 029556 125 ----------HVIRKITNLDH 135 (191)
Q Consensus 125 ----------~rIr~i~~~~~ 135 (191)
++|.++++++.
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTT
T ss_pred ccCCccccCCceEEEEECCCC
Confidence 89999999754
No 63
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.93 E-value=0.00058 Score=58.30 Aligned_cols=80 Identities=15% Similarity=0.072 Sum_probs=55.0
Q ss_pred CCeeeEEEecC---CCeEEEEeCC---C----CeEEEEecCCCCCc---eEEEEe-cCCCccCCCCCCcccccCCCceEE
Q 029556 45 INPHSVIDRPG---SSDLIVLDSS---R----SAFYTLSFPLSEES---VVKRLA-GDGVQGYSDGEPGSARFDKPKSFA 110 (191)
Q Consensus 45 ~~P~gIav~d~---~g~lyVaD~~---n----~~I~~~d~~~~~~g---~v~~~a-G~~~~G~~DG~~~~a~f~~P~gIa 110 (191)
..|.+|+++|+ ++.|||+++. + ++|.+++.+-. ++ ..+.+. +.. ......|.+|+
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~-~~~~~~~~~l~~~~~----------~~~~h~~~~l~ 141 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS-TFKLKEVKTLIDGIP----------GAYIHNGGRIR 141 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS-SCCEEEEEEEEEEEE----------CCSSCCCCCEE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC-CcCcCccEEEEEcCC----------CCCCcCCceEE
Confidence 47999999755 6999999874 3 79999986311 11 122222 211 11244689999
Q ss_pred EcCCCCEEEEeC-------------CCCEEEEEeCCCC
Q 029556 111 VDMKGNIYVADK-------------SNHVIRKITNLDH 135 (191)
Q Consensus 111 vD~~G~iyVaD~-------------~n~rIr~i~~~~~ 135 (191)
++++|.|||++. .+++|.|+++++.
T Consensus 142 ~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 142 FGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp ECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred ECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 999999999963 2368999998664
No 64
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.91 E-value=0.0001 Score=60.98 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=60.7
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|.+++++|..+++||....++++..+|. +|++.-..--. .|.. .-...+..|.|||+|++|++||+-..
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~----~g~~~~~~~L~-~g~~---~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTL----VGEVIGEMSLT-KGSR---GLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECT----TCCEEEEEECS-TTGG---GCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcC----CCCEEEEEEcC-CccC---CcccccCCCCeeEECCCCCEEEEcCC
Confidence 3578999999889999999999999999984 67644443221 1110 01235779999999999999999766
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
| .+.+|++..
T Consensus 244 n-~~y~f~~~~ 253 (255)
T 3qqz_A 244 N-RFYRFTPQS 253 (255)
T ss_dssp T-EEEEEEC--
T ss_pred c-eEEEEEecC
Confidence 5 999998743
No 65
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.85 E-value=0.00068 Score=55.66 Aligned_cols=86 Identities=7% Similarity=-0.024 Sum_probs=60.8
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
...|.+++++|++..+|+++..++.|..++++ .+|....+......+. +.........|++++++++|.+|+++..
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~--~~g~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIA--ADGALTLTDTVQHSGH--GPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEEC--TTSCEEEEEEEECCCC--CSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC--CCCCeeecceeecCCC--CCCccccCCCceEEEECCCCcEEEEeCC
Confidence 35899999986666799999888999998863 3455444332111111 1111123457889999999999999999
Q ss_pred CCEEEEEeCC
Q 029556 124 NHVIRKITNL 133 (191)
Q Consensus 124 n~rIr~i~~~ 133 (191)
+++|+.++..
T Consensus 161 ~~~v~~~~~~ 170 (347)
T 3hfq_A 161 SDKVYVYNVS 170 (347)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 9999999876
No 66
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.83 E-value=7.4e-05 Score=60.31 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=56.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++ ++|++|+++..+++|++++. .+|+....... ....|.+++++++|+ ||+++..
T Consensus 226 ~~p~~i~~d-~~G~l~v~~~~~~~i~~~d~---~~g~~~~~~~~-------------~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 226 GGADGMDFD-EDNNLLVANWGSSHIEVFGP---DGGQPKMRIRC-------------PFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp CEEEEEEEB-TTCCEEEEEETTTEEEEECT---TCBSCSEEEEC-------------SSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceEEC-CCCCEEEEEcCCCEEEEEcC---CCCcEeEEEeC-------------CCCCceeEEECCCCCEEEEEeCC
Confidence 469999995 78999999999999999984 22543222211 114789999999998 9999999
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
+++|.+++++.
T Consensus 289 ~~~l~~~~~~~ 299 (314)
T 1pjx_A 289 NNAVWKFEWQR 299 (314)
T ss_dssp TTEEEEEECSS
T ss_pred CCeEEEEeCCC
Confidence 89999999854
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.82 E-value=0.0017 Score=52.80 Aligned_cols=81 Identities=7% Similarity=0.078 Sum_probs=60.6
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++|+++.+|+++..++.|+.+|. .+++....... ..|.+++++++|+ +|+++..
T Consensus 231 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~---~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 231 HFFINISLDTARQRAFITDSKAAEVLVVDT---RNGNILAKVAA---------------PESLAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp CCEEEEEEETTTTEEEEEESSSSEEEEEET---TTCCEEEEEEC---------------SSCCCEEEETTTTEEEEEETT
T ss_pred cccceEEECCCCCEEEEEeCCCCEEEEEEC---CCCcEEEEEEc---------------CCCceEEECCCCCEEEEEECC
Confidence 467889998777789999999999999986 34554333221 1357899999987 9999999
Q ss_pred CCEEEEEeCCCCCceEEEEecc
Q 029556 124 NHVIRKITNLDHGNQLIRQINL 145 (191)
Q Consensus 124 n~rIr~i~~~~~~~~~i~~i~~ 145 (191)
++.|..++..+. +.+..+..
T Consensus 293 ~~~v~~~d~~~~--~~~~~~~~ 312 (353)
T 3vgz_A 293 AGKVSVIDAKSY--KVVKTFDT 312 (353)
T ss_dssp TTEEEEEETTTT--EEEEEEEC
T ss_pred CCeEEEEECCCC--eEEEEEec
Confidence 999999998664 34444443
No 68
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.81 E-value=0.00028 Score=57.65 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=58.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|+|+++++.++.+|++|..+++|++++. .++....+. . + ..|.+++++++|++|++. +
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~---~~~~~~~~~-~------~--------~~~~~i~~~~dG~l~v~~--~ 72 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDS---FTKQVQRVT-M------D--------APVSSVALRQSGGYVATI--G 72 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEET---TTCCEEEEE-C------S--------SCEEEEEEBTTSSEEEEE--T
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEEC---CCCcEEEEe-C------C--------CceEEEEECCCCCEEEEE--C
Confidence 489999998778999999999999999985 234444332 1 0 258899999999999997 5
Q ss_pred CEEEEEeCCCCCceEE
Q 029556 125 HVIRKITNLDHGNQLI 140 (191)
Q Consensus 125 ~rIr~i~~~~~~~~~i 140 (191)
++|.+++++++..+.+
T Consensus 73 ~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCcEEEE
Confidence 7899999876433333
No 69
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.80 E-value=0.00026 Score=58.19 Aligned_cols=94 Identities=10% Similarity=0.114 Sum_probs=64.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++|++..||+++..+++|..++++ .+|....+..... .-..|.+++++++|. ||+++..
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~--~~g~~~~~~~~~~-----------~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT--ADGHLTLIQQIST-----------EGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEEC--GGGCEEEEEEEEC-----------SSSCCCEEEECTTSSEEEEEETT
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEEC--CCCcEEEeEEEec-----------CCCCcCeEEECCCCCEEEEEEcC
Confidence 3588999986666799999999999999863 2454444332111 012689999999986 9999998
Q ss_pred CCEEEEE--eCCCCCceEEE-EeccCCCceE
Q 029556 124 NHVIRKI--TNLDHGNQLIR-QINLKPEDCS 151 (191)
Q Consensus 124 n~rIr~i--~~~~~~~~~i~-~i~~~~~~~~ 151 (191)
+++|+.+ +++++..+.+. .+.++...|+
T Consensus 307 ~~~v~v~~~d~~tg~l~~~~~~~~~p~p~~~ 337 (347)
T 3hfq_A 307 TDNATLYARDLTSGKLSLLQKDVTVPEGVCV 337 (347)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEECTTEEEE
T ss_pred CCcEEEEEEeCCCCeEEecccceecCCCcEE
Confidence 8888877 66555444444 4566655554
No 70
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.77 E-value=0.00056 Score=55.63 Aligned_cols=74 Identities=12% Similarity=0.116 Sum_probs=57.0
Q ss_pred CCeeeEEEecCCCeEEEEeCC------CCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-E
Q 029556 45 INPHSVIDRPGSSDLIVLDSS------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-I 117 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~------n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-i 117 (191)
..|.+++++|+++.+|+++.. ++.|+++|. .+++.......+ ..|.+++++++|. +
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l 103 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDP---VTLEVTQAIHND--------------LKPFGATINNTTQTL 103 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECT---TTCCEEEEEEES--------------SCCCSEEEETTTTEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcC---CCCeEEEEEecC--------------CCcceEEECCCCCEE
Confidence 379999998777799999977 668999985 345433322111 1588999999987 9
Q ss_pred EEEeCCCCEEEEEeCCCC
Q 029556 118 YVADKSNHVIRKITNLDH 135 (191)
Q Consensus 118 yVaD~~n~rIr~i~~~~~ 135 (191)
|+++..++.|+.++++++
T Consensus 104 ~v~~~~~~~v~~~d~~~~ 121 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDAKTG 121 (353)
T ss_dssp EEEETTTTEEEEEETTTC
T ss_pred EEEecCCCEEEEEeCCCC
Confidence 999999999999998765
No 71
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.74 E-value=0.00038 Score=57.12 Aligned_cols=79 Identities=14% Similarity=0.120 Sum_probs=61.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|+++++. .+|+++|++..+++|+.++. .+|++.+-.+... ....+|..|.+++++++|++||+++.+
T Consensus 165 ~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~---~tG~~~w~~~~~~-------~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 165 GTPFSSAFL-DNGDCLVACGDAHCFVQLNL---ESNRIVRRVNAND-------IEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp SCCCEEEEC-TTSCEEEECBTTSEEEEECT---TTCCEEEEEEGGG-------SBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred CCccceeEc-CCCCEEEEeCCCCeEEEEeC---cCCcEEEEecCCC-------CCCccccccccceEcCCCCEEEEeccC
Confidence 478999994 78999999999999999985 3488777665321 012368899999999999999999743
Q ss_pred ----------CEEEEEeCCC
Q 029556 125 ----------HVIRKITNLD 134 (191)
Q Consensus 125 ----------~rIr~i~~~~ 134 (191)
.++..+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp TCTTGGGSCCCSEEEECTTS
T ss_pred ccccccccCCceEEEECCCC
Confidence 3588888755
No 72
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.72 E-value=0.00028 Score=60.75 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=67.7
Q ss_pred cCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCce
Q 029556 29 EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKS 108 (191)
Q Consensus 29 ~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~g 108 (191)
.+.+.++++++|.. +|.+|++. ++|.+||++...++|++++. .+|....+.+...- + ......|.|
T Consensus 19 ~~~~~~~~va~gL~---~P~~ia~~-pdG~llVter~~G~I~~v~~---~~g~~~~v~~~~~v-~------~~g~~GllG 84 (347)
T 3das_A 19 GSVKVLRTVATGLN---SPWGLAPL-PGGDLLVSSRDEATITRVDA---KTGRKTELGEVPGV-S------PSGEGGLLG 84 (347)
T ss_dssp CCEEEEEEEECCCS---SEEEEEEC-TTSCEEEEETTTCEEEEECT---TTCCEEEEEECTTC-C------CBTTBSEEE
T ss_pred CCCceeEEeecCCC---CceEEEEc-CCCcEEEEEecCCEEEEEEC---CCCcEeeecccCce-e------ecCCCCcee
Confidence 36678889998877 99999995 78899999998899999973 34666555443210 0 112347899
Q ss_pred EEEcC----CCCEEEEeC--CCCEEEEEeCCC
Q 029556 109 FAVDM----KGNIYVADK--SNHVIRKITNLD 134 (191)
Q Consensus 109 IavD~----~G~iyVaD~--~n~rIr~i~~~~ 134 (191)
|++++ +|.+|++.+ ..++|.+++..+
T Consensus 85 ia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 85 IALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred eEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 99997 488999753 567999998754
No 73
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.70 E-value=0.00031 Score=60.70 Aligned_cols=105 Identities=17% Similarity=0.249 Sum_probs=69.5
Q ss_pred cCccCCCCeeeEEEecCCCeEEEEeC-----------------CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCccc
Q 029556 39 DGHQLEINPHSVIDRPGSSDLIVLDS-----------------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSA 101 (191)
Q Consensus 39 ~G~~~~~~P~gIav~d~~g~lyVaD~-----------------~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a 101 (191)
+|. .++.|++++++ ++|.+|+++. ...++++++. ++++.++.
T Consensus 160 ~g~-~~~~pND~~v~-~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----~~~~~~~~-------------- 218 (355)
T 3sre_A 160 RHK-LLPSVNDIVAV-GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVAE-------------- 218 (355)
T ss_dssp CCT-TCSSEEEEEEE-ETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----TCCEEEEE--------------
T ss_pred ccC-CCCCCceEEEe-CCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-----CeEEEeec--------------
Confidence 443 46899999995 7899999875 2467888762 24444431
Q ss_pred ccCCCceEEEcCCC-CEEEEeCCCCEEEEEeCCCCC-ceEEEEeccC--CCceEeccCCCCccEEEEEe
Q 029556 102 RFDKPKSFAVDMKG-NIYVADKSNHVIRKITNLDHG-NQLIRQINLK--PEDCSKSSQSGSGMFWVTVF 166 (191)
Q Consensus 102 ~f~~P~gIavD~~G-~iyVaD~~n~rIr~i~~~~~~-~~~i~~i~~~--~~~~~~~~~~g~~~~~~~~~ 166 (191)
.+..|+||+++++| .+||+|+..++|++++....+ ....+.+.++ +++.+.... -|.+|+...
T Consensus 219 ~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e--~G~lwva~~ 285 (355)
T 3sre_A 219 GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPV--TGDLWVGCH 285 (355)
T ss_dssp EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTT--TCCEEEEEE
T ss_pred CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCC--CCcEEEEec
Confidence 36689999999997 699999999999999975322 2233334333 344443221 246888653
No 74
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.68 E-value=0.00037 Score=63.90 Aligned_cols=96 Identities=10% Similarity=0.127 Sum_probs=63.5
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC---------------------CeEEEEecCCC-C---CceEE--EEecCCCcc----
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR---------------------SAFYTLSFPLS-E---ESVVK--RLAGDGVQG---- 92 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n---------------------~~I~~~d~~~~-~---~g~v~--~~aG~~~~G---- 92 (191)
+.+|++++++|.++.+|++-++| ++|+++..+-. . +.+.. +++|.....
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 36899999987799999997764 66888865211 1 11233 334432211
Q ss_pred CC--CCCCcccccCCCceEEEcCCCCEEE-EeC-----------CCCEEEEEeCCCCCceE
Q 029556 93 YS--DGEPGSARFDKPKSFAVDMKGNIYV-ADK-----------SNHVIRKITNLDHGNQL 139 (191)
Q Consensus 93 ~~--DG~~~~a~f~~P~gIavD~~G~iyV-aD~-----------~n~rIr~i~~~~~~~~~ 139 (191)
+. .+......|+.|++|++|++|+||| +|. +|+.+.++++.++....
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~ 523 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR 523 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEE
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEE
Confidence 00 0111245799999999999999999 785 36689999987654443
No 75
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.67 E-value=0.00015 Score=62.35 Aligned_cols=74 Identities=11% Similarity=0.056 Sum_probs=55.9
Q ss_pred CeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~ 122 (191)
.|++|++ |.+|++||+|+.. ..|+|++ ++|+ +..+.-.. . ...+...|+||+++++|+ |++++.
T Consensus 138 ~~nDvav-D~~GnaYVt~s~~~~~I~rV~----pdG~~~~~~~~~~--~------~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 138 GVVQSAQ-DRDGNSYVAFALGMPAIARVS----ADGKTVSTFAWES--G------NGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp EEEEEEE-CTTSCEEEEEEESSCEEEEEC----TTSCCEEEEEECC--C------CSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCceeEE-CCCCCEEEeCCCCCCeEEEEe----CCCCEEeeeeecC--C------CcccccCcceEEEeCCCCEEEEEcC
Confidence 4899999 5899999999999 9999998 4665 33332111 0 012345799999999986 667777
Q ss_pred CCCEEEEEeCC
Q 029556 123 SNHVIRKITNL 133 (191)
Q Consensus 123 ~n~rIr~i~~~ 133 (191)
.++|.+|+..
T Consensus 205 -~g~L~~fD~~ 214 (334)
T 2p9w_A 205 -PRALTAFDVS 214 (334)
T ss_dssp -SSSEEEEECS
T ss_pred -CCeEEEEcCC
Confidence 9999999976
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.49 E-value=0.0032 Score=51.44 Aligned_cols=71 Identities=13% Similarity=0.027 Sum_probs=59.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..|++++++ .+|++++++..+++|+.+|. +|+..+-.+.+ ..|.++..+++|+++|++..+
T Consensus 125 ~~~~~v~~~-~~G~~lv~~~~~~~v~~~d~----~G~~~w~~~~~--------------~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 125 AQFRQINKN-KKGNYLVPLFATSEVREIAP----NGQLLNSVKLS--------------GTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp GSCSCCEEC-TTSCEEEEETTTTEEEEECT----TSCEEEEEECS--------------SCCCEEEECTTSCEEEECBTT
T ss_pred ccccCceEC-CCCCEEEEecCCCEEEEECC----CCCEEEEEECC--------------CCccceeEcCCCCEEEEeCCC
Confidence 357888884 78999999999999999984 58776665431 258889999999999999999
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
++|..+++++
T Consensus 186 ~~v~~~d~~t 195 (276)
T 3no2_A 186 HCFVQLNLES 195 (276)
T ss_dssp SEEEEECTTT
T ss_pred CeEEEEeCcC
Confidence 9999999984
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.47 E-value=0.0064 Score=50.11 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=55.7
Q ss_pred CCeeeEEEecCCCeEEEEeCC-CCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeC
Q 029556 45 INPHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~-n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~ 122 (191)
..|.+++++|++..||+++.. .++|..++++. .+|+...+..... -..|.+++++++|. +|++..
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~-~~g~~~~~~~~~~------------g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE-TNGTLTKVGYQLT------------GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECT-TTCCEEEEEEEEC------------SSCCCEEEECTTSCEEEEEET
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcC-CCCcEEEeeEecC------------CCCCceEEECCCCCEEEEEEC
Confidence 468899998666679999998 88888887632 2455444321110 12689999999987 999998
Q ss_pred CCCEEEE--EeCCCC
Q 029556 123 SNHVIRK--ITNLDH 135 (191)
Q Consensus 123 ~n~rIr~--i~~~~~ 135 (191)
.+++|+. ++++++
T Consensus 326 ~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 326 DTNVIQIFERDQATG 340 (361)
T ss_dssp TTTEEEEEEECTTTC
T ss_pred CCCCEEEEEEECCCC
Confidence 8888887 565554
No 78
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.47 E-value=0.00071 Score=57.61 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=54.3
Q ss_pred CeeeEEEec------CCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEE
Q 029556 46 NPHSVIDRP------GSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYV 119 (191)
Q Consensus 46 ~P~gIav~d------~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyV 119 (191)
.|.|+++.. -+|++||+|...++|.+++++ ++.+..... . ....+.+|.+++++++|.|||
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~---~~~~~~~~~-----~-----~~~~~~rp~~v~~~pdG~lyv 338 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN---GDKVTEDGR-----I-----LTDRGQRIRDVRTGPDGYLYV 338 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEE---TTEEEEEEE-----E-----SGGGCCCEEEEEECTTSCEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeC---CCeEeeeEE-----c-----ccCCCCceeEEEECCCCcEEE
Confidence 689999952 258999999999999999863 333211000 0 012345899999999999999
Q ss_pred E-eCCCCEEEEEeC
Q 029556 120 A-DKSNHVIRKITN 132 (191)
Q Consensus 120 a-D~~n~rIr~i~~ 132 (191)
+ |..+++|.|+.+
T Consensus 339 ~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 339 LTDESSGELLKVSP 352 (353)
T ss_dssp EECSTTEEEEEEEC
T ss_pred EEeCCCCEEEEEeC
Confidence 7 667899999986
No 79
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.46 E-value=0.0066 Score=49.95 Aligned_cols=84 Identities=12% Similarity=0.078 Sum_probs=60.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.++.|++++|.++.||++.-.+.+|++++. +|.+....-. .| +..|.||+++.+|.+||++.++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~----~g~v~~~i~l--~g----------~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTT----NGDLIRTIPL--DF----------VKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEET----TCCEEEEEEC--SS----------CSSEEEEEECSTTEEEEEETTT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeC----CCCEEEEEec--CC----------CCChHHeEEeCCCEEEEEECCC
Confidence 589999998667889975445889999985 4654443311 11 2468999999999999999999
Q ss_pred CEEEEEeCCCCCc-eEEEEec
Q 029556 125 HVIRKITNLDHGN-QLIRQIN 144 (191)
Q Consensus 125 ~rIr~i~~~~~~~-~~i~~i~ 144 (191)
+++..++...... ..+..+.
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~ 111 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIK 111 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEcCCCCeeeeeeeec
Confidence 9999988644332 3344443
No 80
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.44 E-value=0.0037 Score=51.77 Aligned_cols=87 Identities=7% Similarity=0.006 Sum_probs=62.7
Q ss_pred CCeeeEEEecCCCeEEEEeC--CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 45 INPHSVIDRPGSSDLIVLDS--SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~--~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
..|+|++++ +++.||++.. +.++|+++|. .+|++....-.+. -..+.|++++. +.+|++.+
T Consensus 21 ~f~~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~---~tg~v~~~i~l~~------------~~fgeGi~~~g-~~lyv~t~ 83 (266)
T 2iwa_A 21 AFTQGLVYA-ENDTLFESTGLYGRSSVRQVAL---QTGKVENIHKMDD------------SYFGEGLTLLN-EKLYQVVW 83 (266)
T ss_dssp CCEEEEEEC-STTEEEEEECSTTTCEEEEEET---TTCCEEEEEECCT------------TCCEEEEEEET-TEEEEEET
T ss_pred CCcccEEEe-CCCeEEEECCCCCCCEEEEEEC---CCCCEEEEEecCC------------CcceEEEEEeC-CEEEEEEe
Confidence 368999996 5589999975 4789999996 4566444332110 12456889983 58999999
Q ss_pred CCCEEEEEeCCCCCceEEEEeccC-CCce
Q 029556 123 SNHVIRKITNLDHGNQLIRQINLK-PEDC 150 (191)
Q Consensus 123 ~n~rIr~i~~~~~~~~~i~~i~~~-~~~~ 150 (191)
.++++.++|+++. +.++.+..+ ++++
T Consensus 84 ~~~~v~viD~~t~--~v~~~i~~g~~~g~ 110 (266)
T 2iwa_A 84 LKNIGFIYDRRTL--SNIKNFTHQMKDGW 110 (266)
T ss_dssp TCSEEEEEETTTT--EEEEEEECCSSSCC
T ss_pred cCCEEEEEECCCC--cEEEEEECCCCCeE
Confidence 9999999999754 566777666 5443
No 81
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.41 E-value=0.0083 Score=48.42 Aligned_cols=97 Identities=16% Similarity=0.258 Sum_probs=63.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCe-EEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSA-FYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~-I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~ 122 (191)
..|++++++|++..+|+++...++ |+.++++ .+|.+......... .-..|.+++++++|. +|+++.
T Consensus 128 ~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~--~~g~~~~~~~~~~~----------~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 128 YDAVGIAISPNGNGLILIDRSSANTVRRFKID--ADGVLFDTGQEFIS----------GGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp TTEEEEEECTTSSCEEEEEETTTTEEEEEEEC--TTCCEEEEEEEEEC----------SSSSEEEEEECTTSSEEEEEET
T ss_pred CCccceEECCCCCEEEEEecCCCceEEEEEEC--CCCcEeecCCcccc----------CCCCccceEECCCCCEEEEEeC
Confidence 479999997555579999998778 8888763 34443222111000 012589999999997 999999
Q ss_pred CCCEEEEEeCCCCCc-eEEEEeccC--CCceEec
Q 029556 123 SNHVIRKITNLDHGN-QLIRQINLK--PEDCSKS 153 (191)
Q Consensus 123 ~n~rIr~i~~~~~~~-~~i~~i~~~--~~~~~~~ 153 (191)
.+++|+.++..++.. +.+..+... +..+++.
T Consensus 196 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~s 229 (331)
T 3u4y_A 196 IGNSIGILETQNPENITLLNAVGTNNLPGTIVVS 229 (331)
T ss_dssp TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEEC
T ss_pred CCCeEEEEECCCCcccceeeeccCCCCCceEEEC
Confidence 999999999876533 224444332 3444444
No 82
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.37 E-value=0.0041 Score=54.99 Aligned_cols=65 Identities=9% Similarity=0.083 Sum_probs=43.7
Q ss_pred CeeeEEEecC---CCeEEEEeCC------------CCeEEEEecCCCCCc---eEEEEe-cCCCccCCCCCCcccccCCC
Q 029556 46 NPHSVIDRPG---SSDLIVLDSS------------RSAFYTLSFPLSEES---VVKRLA-GDGVQGYSDGEPGSARFDKP 106 (191)
Q Consensus 46 ~P~gIav~d~---~g~lyVaD~~------------n~~I~~~d~~~~~~g---~v~~~a-G~~~~G~~DG~~~~a~f~~P 106 (191)
-+.||+++|+ ++.|||+++. .++|.|++.+.. ++ ..+++. +... .....+
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~-~~~~~~~~~i~~~~p~----------~~~H~~ 146 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKS-TDTLEKPVDLLAGLPS----------SKDHQS 146 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETT-TTEEEEEEEEEEEECC----------CSSCCE
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCC-CCCcCCcEEEEEcCCC----------CCCCCC
Confidence 4569999754 8999999964 468999986321 12 223332 2221 123468
Q ss_pred ceEEEcCCCCEEEEe
Q 029556 107 KSFAVDMKGNIYVAD 121 (191)
Q Consensus 107 ~gIavD~~G~iyVaD 121 (191)
.+|+++++|.|||+-
T Consensus 147 ~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 147 GRLVIGPDQKIYYTI 161 (454)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred CeEeECCCCeEEEEE
Confidence 999999999999983
No 83
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.31 E-value=0.0027 Score=52.42 Aligned_cols=90 Identities=12% Similarity=0.107 Sum_probs=57.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc----e-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEE
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES----V-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYV 119 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g----~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyV 119 (191)
+|++++++|++..+|+++..+++|+.++++.. .+ + +.......... ...-..|.+++++++|. +|+
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~-~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPN-ANADNKEKFLTKGTPEAFK-------VAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTT-CCTTTCCCCEEEEEEEEEE-------CCTTCCEEEEEECTTSSEEEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCC-CCcccccceeeccccccee-------cCCCCCCeEEEEcCCCCEEEE
Confidence 56889997555569999999999998876421 22 1 21110000000 00113588999999996 999
Q ss_pred EeCCCCEEEEEeCCCCCceEEEEe
Q 029556 120 ADKSNHVIRKITNLDHGNQLIRQI 143 (191)
Q Consensus 120 aD~~n~rIr~i~~~~~~~~~i~~i 143 (191)
++..+++|+.++..++..+.+..+
T Consensus 228 ~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 228 INEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EETTTCEEEEEEEETTEEEEEEEE
T ss_pred EcCCCCeEEEEEecCCceEEeEEE
Confidence 998889999998765433333333
No 84
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.28 E-value=0.0031 Score=51.02 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=59.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce----EEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV----VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYV 119 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~----v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyV 119 (191)
..|++++++|++..+|+++..+++|+.++.+ +++ +..+.. -..|.+++++++|. +|+
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~---~~~~~~~~~~~~~---------------~~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQ---NPENITLLNAVGT---------------NNLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECS---STTSCEEEEEEEC---------------SSCCCCEEECTTSSEEEE
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECC---CCcccceeeeccC---------------CCCCceEEECCCCCEEEE
Confidence 4799999975555699999999999999862 333 333321 13688999999998 999
Q ss_pred EeCCCCEEEEEeCCCCCceEEEE
Q 029556 120 ADKSNHVIRKITNLDHGNQLIRQ 142 (191)
Q Consensus 120 aD~~n~rIr~i~~~~~~~~~i~~ 142 (191)
+....+.|..++.+++..+.+..
T Consensus 238 ~~~~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 238 LTESTVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp ECSSEEEEEEEETTTTEEEEEEE
T ss_pred EEcCCCEEEEEECCCCceeeecc
Confidence 99888899999997754433433
No 85
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.22 E-value=0.0045 Score=56.90 Aligned_cols=92 Identities=11% Similarity=0.168 Sum_probs=59.4
Q ss_pred CCCeeeEEEecCCCeEEEEeCCC---------------------CeEEEEecCCCC----Cce--EEEEecCCCc--cC-
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSR---------------------SAFYTLSFPLSE----ESV--VKRLAGDGVQ--GY- 93 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n---------------------~~I~~~d~~~~~----~g~--v~~~aG~~~~--G~- 93 (191)
+.+|++++++|.++.+|++-+.| ++|++++.+-+. ..+ +.+++|.... +.
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 57899999987799999998864 468888753211 112 2233343221 00
Q ss_pred CC---CCCcccccCCCceEEEcCCCCEEEEeC------------CCCEEEEEeCCCC
Q 029556 94 SD---GEPGSARFDKPKSFAVDMKGNIYVADK------------SNHVIRKITNLDH 135 (191)
Q Consensus 94 ~D---G~~~~a~f~~P~gIavD~~G~iyVaD~------------~n~rIr~i~~~~~ 135 (191)
.+ .......|+.|++|++|+.|+|||+.- +|+.+...++..+
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g 519 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG 519 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC
T ss_pred cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC
Confidence 01 111345799999999999999999753 3567777777544
No 86
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.16 E-value=0.018 Score=49.35 Aligned_cols=81 Identities=9% Similarity=0.013 Sum_probs=53.1
Q ss_pred CCeeeEEEecC---CCeEEEEeC--CCCeEEEEecCCC-----CCceEE-EEecCCCccCCCCCCcccccCCCceEEEcC
Q 029556 45 INPHSVIDRPG---SSDLIVLDS--SRSAFYTLSFPLS-----EESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (191)
Q Consensus 45 ~~P~gIav~d~---~g~lyVaD~--~n~~I~~~d~~~~-----~~g~v~-~~aG~~~~G~~DG~~~~a~f~~P~gIavD~ 113 (191)
.-|.||+++|+ ++.||++.+ ..++|.|+..+-. .-...+ ++.+... .....+..|++++
T Consensus 80 ~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~----------~~~H~g~~l~fgp 149 (347)
T 3das_A 80 GGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK----------GVIHNGGRIAFGP 149 (347)
T ss_dssp BSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC----------CSSCCCCCEEECT
T ss_pred CCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC----------CCCccCccccCCC
Confidence 46899999753 789999754 5679999976321 001122 2222221 1123567899999
Q ss_pred CCCEEEEe-------------CCCCEEEEEeCCCC
Q 029556 114 KGNIYVAD-------------KSNHVIRKITNLDH 135 (191)
Q Consensus 114 ~G~iyVaD-------------~~n~rIr~i~~~~~ 135 (191)
+|.|||+- ...++|.|+++++.
T Consensus 150 DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 150 DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 99999993 23579999998654
No 87
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.15 E-value=0.0068 Score=52.38 Aligned_cols=77 Identities=9% Similarity=0.124 Sum_probs=55.8
Q ss_pred CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCC--CceEEEEecCCCccCCCCCCcccccC-CCceEEEc--CC--CC
Q 029556 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE--ESVVKRLAGDGVQGYSDGEPGSARFD-KPKSFAVD--MK--GN 116 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~--~g~v~~~aG~~~~G~~DG~~~~a~f~-~P~gIavD--~~--G~ 116 (191)
...|+++++||..+.|||++... -|++++.+.+. .+++...++.+ .|. .|.||++. ++ |.
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g------------~l~aDvEGLai~~~~~g~gy 245 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGR------------HLTRDIEGLTIYYAADGKGY 245 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSS------------SBCSCEEEEEEEECGGGCEE
T ss_pred CCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCC------------ccccCcceEEEEecCCCCEE
Confidence 35899999988899999999985 49999853222 12333222211 222 68999995 33 56
Q ss_pred EEEEeCCCCEEEEEeCC
Q 029556 117 IYVADKSNHVIRKITNL 133 (191)
Q Consensus 117 iyVaD~~n~rIr~i~~~ 133 (191)
+++++.+++....++.+
T Consensus 246 LivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 246 LMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEGGGTEEEEEESS
T ss_pred EEEEcCCCCEEEEEECC
Confidence 99999999999999986
No 88
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.14 E-value=0.025 Score=45.14 Aligned_cols=79 Identities=8% Similarity=0.031 Sum_probs=55.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCC-CEEEEeC--
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVADK-- 122 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G-~iyVaD~-- 122 (191)
.|.+++++|++..+|+++...++|+.++. .+++.......+.. ...-..|.+++++++| .+|+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~---~~~~~~~~~~~~~~--------~~~~~~~~~~~~s~dg~~l~~~~~~~ 103 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDL---VTGETLGRIDLSTP--------EERVKSLFGAALSPDGKTLAIYESPV 103 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEET---TTCCEEEEEECCBT--------TEEEECTTCEEECTTSSEEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEEC---CCCCeEeeEEcCCc--------ccccccccceEECCCCCEEEEEeccc
Confidence 59999998655689999999999999986 34554332221110 0012268899999998 5889852
Q ss_pred ---------CCCEEEEEeCCCC
Q 029556 123 ---------SNHVIRKITNLDH 135 (191)
Q Consensus 123 ---------~n~rIr~i~~~~~ 135 (191)
.++.|+.++.++.
T Consensus 104 ~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 104 RLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp EECSSCEEECCCEEEEEETTTT
T ss_pred ccccccccccCceEEEEECCCC
Confidence 3589999998654
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.10 E-value=0.011 Score=47.43 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=58.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++|++..+|+++..++.|..++.+.. ++....+..... -..|.+++++++|+ +|++...
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~-~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSED-GSVLSKEGFQPT------------ETQPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-SCCEEEEEEEEC------------SSSCCCEEECTTSSEEEEECTT
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCC-CCceEEeeeecC------------CCccceEEECCCCCEEEEecCC
Confidence 356789998666689999999999999987321 233333321100 01388999999987 8999887
Q ss_pred CCEEEEE--eCCCCCceEEEEecc
Q 029556 124 NHVIRKI--TNLDHGNQLIRQINL 145 (191)
Q Consensus 124 n~rIr~i--~~~~~~~~~i~~i~~ 145 (191)
++.|+.+ +++++..+.+..+..
T Consensus 298 ~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 298 SHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCeEEEEEEcCCCceeeEcccccc
Confidence 7888876 555544455555544
No 90
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.09 E-value=0.0071 Score=53.28 Aligned_cols=88 Identities=8% Similarity=-0.027 Sum_probs=60.9
Q ss_pred CCeeeEEEecCCCeEEEEeC---------CCCeEEEEecCCCCCce-EEEE-ecCCCccCCCCCCcccccCCCceEEEcC
Q 029556 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESV-VKRL-AGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~-v~~~-aG~~~~G~~DG~~~~a~f~~P~gIavD~ 113 (191)
..| +++++|++..+||++. ..+.|.++|. .+++ +..+ .+.. .. ......|+++++++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~---~t~~vv~~I~v~g~-~r-------~~~g~~P~~~~~sp 186 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP---VTFLPIADIELPDA-PR-------FLVGTYQWMNALTP 186 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTC-CC-------CCBSCCGGGSEECT
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC---CCCcEEEEEECCCc-cc-------cccCCCcceEEEcC
Confidence 479 9999988889999986 3567999985 3443 3333 2210 00 00124799999999
Q ss_pred CC-CEEEEeCC-CCEEEEEeCCCCCceEEEEeccC
Q 029556 114 KG-NIYVADKS-NHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 114 ~G-~iyVaD~~-n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
+| .+||+... .+.|.+||.... +.++.+.++
T Consensus 187 DGk~lyV~n~~~~~~VsVID~~t~--kvv~~I~v~ 219 (426)
T 3c75_H 187 DNKNLLFYQFSPAPAVGVVDLEGK--TFDRMLDVP 219 (426)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTT--EEEEEEECC
T ss_pred CCCEEEEEecCCCCeEEEEECCCC--eEEEEEEcC
Confidence 97 59999875 789999999765 455566554
No 91
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.09 E-value=0.036 Score=45.67 Aligned_cols=98 Identities=17% Similarity=0.282 Sum_probs=67.6
Q ss_pred eeeeccCccEEe---cCCcEEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccC
Q 029556 17 LLFSLVSSGLLL---EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGY 93 (191)
Q Consensus 17 ~~~~~~~g~l~~---~dGy~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~ 93 (191)
+++...++.+++ ..| .......+.. .|..++++|++..+|++...++.|+.++. .+++.......+
T Consensus 5 ~vs~~~d~~v~v~d~~~~-~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~d~---~~~~~~~~~~~~---- 73 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSN-KVTATIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIIDT---ATNNVIATVPAG---- 73 (391)
T ss_dssp EEEETTTTEEEEEETTTT-EEEEEEECSS---SEEEEEECTTSSEEEEEEGGGTEEEEEET---TTTEEEEEEECS----
T ss_pred EEEcCCCCEEEEEECCCC-eEEEEeecCC---CcceEEECCCCCEEEEECCCCCeEEEEEC---CCCeEEEEEECC----
Confidence 344555666633 345 3333333333 69999998666678899988999999986 356544433211
Q ss_pred CCCCCcccccCCCceEEEcCCCC-EEEEeCCCCEEEEEeCCCC
Q 029556 94 SDGEPGSARFDKPKSFAVDMKGN-IYVADKSNHVIRKITNLDH 135 (191)
Q Consensus 94 ~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n~rIr~i~~~~~ 135 (191)
..|.+++++++|. +|++...++.|+.++..++
T Consensus 74 ----------~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 74 ----------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp ----------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ----------CCccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 1578999999986 8899888899999998654
No 92
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.08 E-value=0.0065 Score=50.30 Aligned_cols=83 Identities=7% Similarity=-0.122 Sum_probs=60.7
Q ss_pred EEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEc
Q 029556 33 TVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVD 112 (191)
Q Consensus 33 ~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD 112 (191)
.++.+.+.. ...|++++++++++.+|++|..+++|++++. .++....+.- + ..|.+++++
T Consensus 39 ~~~~~~~~~--~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~---~~~~~~~~~~-~--------------~~v~~i~~~ 98 (326)
T 2ghs_A 39 AGRVLDETP--MLLGEGPTFDPASGTAWWFNILERELHELHL---ASGRKTVHAL-P--------------FMGSALAKI 98 (326)
T ss_dssp CCEEEECSC--CSBEEEEEEETTTTEEEEEEGGGTEEEEEET---TTTEEEEEEC-S--------------SCEEEEEEE
T ss_pred ceEEeeccC--CCCCcCCeEeCCCCEEEEEECCCCEEEEEEC---CCCcEEEEEC-C--------------CcceEEEEe
Confidence 455665532 2479999998667899999999999999985 3455544321 0 157899999
Q ss_pred CCCCEEEEeCCCCEEEEEeCCCCCc
Q 029556 113 MKGNIYVADKSNHVIRKITNLDHGN 137 (191)
Q Consensus 113 ~~G~iyVaD~~n~rIr~i~~~~~~~ 137 (191)
++|++|++. ...|.++++.++..
T Consensus 99 ~dg~l~v~~--~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 99 SDSKQLIAS--DDGLFLRDTATGVL 121 (326)
T ss_dssp ETTEEEEEE--TTEEEEEETTTCCE
T ss_pred CCCeEEEEE--CCCEEEEECCCCcE
Confidence 999999997 35699999866543
No 93
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.89 E-value=0.0077 Score=50.25 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=54.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|++++++|++..+|++|.++++|+.++.+ .+|+...+.....+ ..-..|.+++++++|. +|++...
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~--~~g~~~~~~~~~~~---------~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKL--ASGEVELVGSVDAP---------DPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEC--TTSCEEEEEEEECS---------STTCCEEEEEECTTSSEEEEEETT
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEEC--CCCCEEEeeeEecC---------CCCCCCCEeEECCCCCEEEEEECC
Confidence 5899999986666799999999999999873 15655433211000 0013589999999985 8999988
Q ss_pred CCEEEEEeC
Q 029556 124 NHVIRKITN 132 (191)
Q Consensus 124 n~rIr~i~~ 132 (191)
+++|..++.
T Consensus 214 ~~~v~v~~~ 222 (365)
T 1jof_A 214 GNRICEYVI 222 (365)
T ss_dssp TTEEEEEEE
T ss_pred CCeEEEEEE
Confidence 888888754
No 94
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.89 E-value=0.03 Score=46.52 Aligned_cols=68 Identities=9% Similarity=0.002 Sum_probs=50.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..+|+++ .++.||+++..+++++++|. .+.+ +..+. .+ ..+.|++.|. +.+|++| +.
T Consensus 97 FgeGit~--~g~~Ly~ltw~~~~v~V~D~---~Tl~~~~ti~-~~--------------~eGwGLt~Dg-~~L~vSd-Gs 154 (268)
T 3nok_A 97 FAEGLAS--DGERLYQLTWTEGLLFTWSG---MPPQRERTTR-YS--------------GEGWGLCYWN-GKLVRSD-GG 154 (268)
T ss_dssp CEEEEEE--CSSCEEEEESSSCEEEEEET---TTTEEEEEEE-CS--------------SCCCCEEEET-TEEEEEC-SS
T ss_pred ceeEEEE--eCCEEEEEEccCCEEEEEEC---CcCcEEEEEe-CC--------------CceeEEecCC-CEEEEEC-CC
Confidence 4577888 47899999999999999995 3444 33332 11 1357888874 6899999 58
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
++|+.+|+++.
T Consensus 155 ~~l~~iDp~T~ 165 (268)
T 3nok_A 155 TMLTFHEPDGF 165 (268)
T ss_dssp SEEEEECTTTC
T ss_pred CEEEEEcCCCC
Confidence 89999999764
No 95
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.87 E-value=0.022 Score=47.14 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=57.7
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEe-cCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLA-GDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~a-G~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
|++..++++++.+|++| +.++|..+|. .+.+ ...+. |.. ...+..|+++.+. +|.+|++.+..
T Consensus 107 ~~g~glt~Dg~~l~vs~-gs~~l~viD~---~t~~v~~~I~Vg~~----------~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 107 KDGWGLATDGKILYGSD-GTSILYEIDP---HTFKLIKKHNVKYN----------GHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp SSCCEEEECSSSEEEEC-SSSEEEEECT---TTCCEEEEEECEET----------TEECCCEEEEEEE-TTEEEEEETTS
T ss_pred CCeEEEEECCCEEEEEC-CCCeEEEEEC---CCCcEEEEEEECCC----------CcccccceeEEEE-CCEEEEecCCC
Confidence 66666665688999999 6889999985 2333 33322 211 1134468898888 78999999999
Q ss_pred CEEEEEeCCCCCceEEEEecc
Q 029556 125 HVIRKITNLDHGNQLIRQINL 145 (191)
Q Consensus 125 ~rIr~i~~~~~~~~~i~~i~~ 145 (191)
+.|.+||++++ +.++.|.+
T Consensus 172 ~~V~vID~~tg--~V~~~I~~ 190 (266)
T 2iwa_A 172 DCIARISAKDG--TLLGWILL 190 (266)
T ss_dssp SEEEEEETTTC--CEEEEEEC
T ss_pred CeEEEEECCCC--cEEEEEEC
Confidence 99999999876 34555554
No 96
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.87 E-value=0.012 Score=48.76 Aligned_cols=93 Identities=16% Similarity=0.233 Sum_probs=56.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEe--cCCC----ccC----CCCCC-----------c----
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLA--GDGV----QGY----SDGEP-----------G---- 99 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~a--G~~~----~G~----~DG~~-----------~---- 99 (191)
..+|++++ ++.||+++..+++++++|.+ +.+ +..+. +.+. .|. .||.. .
T Consensus 88 FgeGit~~--g~~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 88 FGEGISDW--KDKIVGLTWKNGLGFVWNIR---NLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEETT---TCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEECc---cCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 45778884 67999999999999999962 222 22221 1100 000 01110 0
Q ss_pred -----ccccCCCceEEEcCCCCEEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 100 -----SARFDKPKSFAVDMKGNIYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 100 -----~a~f~~P~gIavD~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
...+..++.+... +|.+|++.+..+.|.+||++++ +.++.|.+.
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG--~V~~~Id~~ 211 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETG--KVTGIIDLN 211 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC--BEEEEEECT
T ss_pred EeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCC--cEEEEEECC
Confidence 0122334456665 6899999999999999999876 445555543
No 97
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.85 E-value=0.1 Score=42.62 Aligned_cols=119 Identities=15% Similarity=0.170 Sum_probs=66.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
.+.+++. +++.||++| +.++|+.+|. .+.++...+..+.. | ..+..++.+... +|.+|++.+..+
T Consensus 106 ~Gwglt~--dg~~L~vSd-gs~~l~~iDp---~t~~~~~~I~V~~~----g----~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 106 EGWALTS--DDSHLYMSD-GTAVIRKLDP---DTLQQVGSIKVTAG----G----RPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp CCCEEEE--CSSCEEEEC-SSSEEEEECT---TTCCEEEEEECEET----T----EECCCEEEEEEE-TTEEEEEETTTT
T ss_pred CceEEee--CCCEEEEEC-CCCeEEEEeC---CCCeEEEEEEEccC----C----cccccceeeEEe-CCEEEEEECCCC
Confidence 4455554 577899999 4788999985 23332222211111 1 123345556655 689999999999
Q ss_pred EEEEEeCCCCCceEEEEeccC---CCceEeccCCCCccEEEEEe---cCeEEEeeeeeEEEEE
Q 029556 126 VIRKITNLDHGNQLIRQINLK---PEDCSKSSQSGSGMFWVTVF---SPYLISCKSFWVHLYL 182 (191)
Q Consensus 126 rIr~i~~~~~~~~~i~~i~~~---~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~ 182 (191)
.|.+||++++ +.+..+.+. +..-... ......+-.++. ..-+|-.-..|.++|.
T Consensus 171 ~I~vIDp~tG--~V~~~idl~~l~~~~~~~~-~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~ 230 (243)
T 3mbr_X 171 RIARIDPASG--KVVAWIDLQALVPDADALT-DSTNDVLNGIAFDAEHDRLFVTGKRWPMLYE 230 (243)
T ss_dssp EEEEECTTTC--BEEEEEECGGGSTTTTSCC-CTTSSCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred eEEEEECCCC--CEEEEEECCcCcccccccc-CCcCCceEEEEEcCCCCEEEEECCCCCcEEE
Confidence 9999999876 344444433 1110000 000111222222 3455666788988875
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.83 E-value=0.097 Score=43.03 Aligned_cols=74 Identities=18% Similarity=0.367 Sum_probs=56.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++|++..+|++....+.|+.+|. .+++.......+ ..|.+++++++|. +|++...
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~---~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDT---TSNTVAGTVKTG--------------KSPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEET---TTTEEEEEEECS--------------SSEEEEEECTTSSEEEEEETT
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEEC---CCCeEEEEEeCC--------------CCcceEEECCCCCEEEEEeCC
Confidence 378999998667779999988899999986 345543333211 1478899999987 7789988
Q ss_pred CCEEEEEeCCCC
Q 029556 124 NHVIRKITNLDH 135 (191)
Q Consensus 124 n~rIr~i~~~~~ 135 (191)
++.|+.++...+
T Consensus 137 ~~~v~~~d~~~~ 148 (391)
T 1l0q_A 137 DKTVSVINTVTK 148 (391)
T ss_dssp TTEEEEEETTTT
T ss_pred CCEEEEEECCCC
Confidence 999999998553
No 99
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.75 E-value=0.027 Score=45.25 Aligned_cols=81 Identities=10% Similarity=0.009 Sum_probs=57.2
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNH 125 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n~ 125 (191)
+.|++++ +++.+|++...++.|+++|. .+++.......+. ...|.+++++++|. +|++...++
T Consensus 2 ~~g~~~~-~~~~~~v~~~~~~~v~~~d~---~~~~~~~~~~~~~------------~~~~~~~~~s~dg~~~~v~~~~~~ 65 (349)
T 1jmx_B 2 DTGPALK-AGHEYMIVTNYPNNLHVVDV---ASDTVYKSCVMPD------------KFGPGTAMMAPDNRTAYVLNNHYG 65 (349)
T ss_dssp --CCCCC-TTCEEEEEEETTTEEEEEET---TTTEEEEEEECSS------------CCSSCEEEECTTSSEEEEEETTTT
T ss_pred Ccccccc-CCCEEEEEeCCCCeEEEEEC---CCCcEEEEEecCC------------CCCCceeEECCCCCEEEEEeCCCC
Confidence 4567774 78899999999999999986 3555433322110 11488999999986 899999999
Q ss_pred EEEEEeCCCCCceEEEEecc
Q 029556 126 VIRKITNLDHGNQLIRQINL 145 (191)
Q Consensus 126 rIr~i~~~~~~~~~i~~i~~ 145 (191)
.|+.++..++ +.+..+..
T Consensus 66 ~i~~~d~~t~--~~~~~~~~ 83 (349)
T 1jmx_B 66 DIYGIDLDTC--KNTFHANL 83 (349)
T ss_dssp EEEEEETTTT--EEEEEEES
T ss_pred cEEEEeCCCC--cEEEEEEc
Confidence 9999998654 34444443
No 100
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.73 E-value=0.0083 Score=50.04 Aligned_cols=93 Identities=6% Similarity=-0.037 Sum_probs=60.3
Q ss_pred CeeeEE-EecCCCeEEEEeCCCC-----eEEEEecCCCCCceEEEEec-CCCccCCCCCCcccccCCCceEEEcC---CC
Q 029556 46 NPHSVI-DRPGSSDLIVLDSSRS-----AFYTLSFPLSEESVVKRLAG-DGVQGYSDGEPGSARFDKPKSFAVDM---KG 115 (191)
Q Consensus 46 ~P~gIa-v~d~~g~lyVaD~~n~-----~I~~~d~~~~~~g~v~~~aG-~~~~G~~DG~~~~a~f~~P~gIavD~---~G 115 (191)
.|.+++ ++|++..||+++.+.+ +|..++++ .+|++..+.. ... .-..|.++++++ +|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~--~~g~~~~~~~~~~~-----------~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR--DCGSIEKQLFLSPT-----------PTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC--TTSCEEEEEEEEEC-----------SSCCTTCCCEEECTTCT
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC--CCCCEEEeeeeeec-----------CCCCcccceecCCCcCC
Confidence 489999 9866668999987766 88888763 3566554221 000 012578888888 55
Q ss_pred -CEEEEeCCCCEEEEEeCCCCCceEEEEeccCCCceE
Q 029556 116 -NIYVADKSNHVIRKITNLDHGNQLIRQINLKPEDCS 151 (191)
Q Consensus 116 -~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~~~~~~ 151 (191)
.+|++...++.|+.++.+....+.+..+.++...|.
T Consensus 322 ~~l~v~~~~~~~v~v~~~~~~~l~~~~~~~~~~p~~~ 358 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFG 358 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEE
T ss_pred CEEEEEEcCCCeEEEEEEchhhCceeeEEEcCCCcce
Confidence 599998888888888765443333445555554453
No 101
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.64 E-value=0.022 Score=49.01 Aligned_cols=78 Identities=5% Similarity=-0.088 Sum_probs=54.7
Q ss_pred CCeeeEEEecCCCeEEEEeC---------CCCeEEEEecCCCCCce-EEEE-ecCCCccCCCCCCcccccCCCceEEEcC
Q 029556 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESV-VKRL-AGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~-v~~~-aG~~~~G~~DG~~~~a~f~~P~gIavD~ 113 (191)
..| +++++|++..+||+++ ..+.|.++|. .+++ +..+ +|.+ .. ......|+++++++
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~---~T~~vv~~I~v~~~-~~-------~~~g~~P~~ia~Sp 133 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP---VTFLPIADIELPDA-PR-------FSVGPRVHIIGNCA 133 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT---TTCCEEEEEEETTS-CS-------CCBSCCTTSEEECT
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCCEEEEEECCCc-cc-------cccCCCcceEEEcC
Confidence 369 9999988889999984 4688999986 3443 3333 2210 00 01124799999999
Q ss_pred CC-CEEEEeCC-CCEEEE--EeCCC
Q 029556 114 KG-NIYVADKS-NHVIRK--ITNLD 134 (191)
Q Consensus 114 ~G-~iyVaD~~-n~rIr~--i~~~~ 134 (191)
+| .+||+... ++.|.. +|+.+
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCEEEEEccCCCCeEEEEEEchhh
Confidence 97 59999875 677888 88754
No 102
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.59 E-value=0.012 Score=48.85 Aligned_cols=83 Identities=8% Similarity=0.026 Sum_probs=54.9
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
.+.|++. +++.||++| +.++|+.+|. .+.++...+-.+. + ...+..++.+... +|.+|++.+..+
T Consensus 137 eGwGLt~--Dg~~L~vSd-Gs~~l~~iDp---~T~~v~~~I~V~~----~----g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 137 EGWGLCY--WNGKLVRSD-GGTMLTFHEP---DGFALVGAVQVKL----R----GQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp CCCCEEE--ETTEEEEEC-SSSEEEEECT---TTCCEEEEEECEE----T----TEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred ceeEEec--CCCEEEEEC-CCCEEEEEcC---CCCeEEEEEEeCC----C----CcccccccccEEe-CCEEEEEECCCC
Confidence 3456665 478999999 5889999985 3333322221111 0 1234456677776 789999999999
Q ss_pred EEEEEeCCCCCceEEEEecc
Q 029556 126 VIRKITNLDHGNQLIRQINL 145 (191)
Q Consensus 126 rIr~i~~~~~~~~~i~~i~~ 145 (191)
.|.+||++++ +.++.|.+
T Consensus 202 ~I~vIDp~TG--~V~~~Idl 219 (268)
T 3nok_A 202 DVLEIDPATG--TVVGVIDA 219 (268)
T ss_dssp EEEEECTTTC--BEEEEEEC
T ss_pred eEEEEeCCCC--cEEEEEEC
Confidence 9999999876 34444543
No 103
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.59 E-value=0.12 Score=44.96 Aligned_cols=89 Identities=8% Similarity=0.006 Sum_probs=61.0
Q ss_pred CCeeeEEEecCCCeEEEEeC---------CCCeEEEEecCCCCCce-EEEE-ecCCCccCCCCCCcccccCCCceEEEcC
Q 029556 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESV-VKRL-AGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~-v~~~-aG~~~~G~~DG~~~~a~f~~P~gIavD~ 113 (191)
..|+ ++++|++..+||+++ ..+.|.++|. .+++ +..+ .+.+.. ...-..|.++++++
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~---~t~~v~~~I~v~~g~r--------~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP---VTLLPTADIELPDAPR--------FLVGTYPWMTSLTP 146 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCC--------CCBSCCGGGEEECT
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCeEEEEEECCCccc--------cccCCCCceEEEcC
Confidence 4686 999988888999985 2467999985 3343 3333 222110 00123799999999
Q ss_pred CCC-EEEEeCC-CCEEEEEeCCCCCceEEEEeccCC
Q 029556 114 KGN-IYVADKS-NHVIRKITNLDHGNQLIRQINLKP 147 (191)
Q Consensus 114 ~G~-iyVaD~~-n~rIr~i~~~~~~~~~i~~i~~~~ 147 (191)
+|. +||+... .+.|..||.+.+ +.++.|.++.
T Consensus 147 DGk~lyVan~~~~~~VsVID~~t~--~vv~tI~v~g 180 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVGVVDLEGK--AFKRMLDVPD 180 (386)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTT--EEEEEEECCS
T ss_pred CCCEEEEEEcCCCCeEEEEECCCC--cEEEEEECCC
Confidence 986 9999864 789999999775 5666776643
No 104
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.58 E-value=0.029 Score=47.18 Aligned_cols=85 Identities=9% Similarity=0.089 Sum_probs=57.5
Q ss_pred CeeeEEEecCCCeEEEEeC---------CCCeEEEEecCCCCCce-EEEEe-cCCCccCCCCCCcccccCCCceEEEcCC
Q 029556 46 NPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESV-VKRLA-GDGVQGYSDGEPGSARFDKPKSFAVDMK 114 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~-v~~~a-G~~~~G~~DG~~~~a~f~~P~gIavD~~ 114 (191)
.| +++++|++..+|+++. ..+.|..+|. .+++ +..+. +.+. ...-..|.+++++++
T Consensus 52 ~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~~~~~---------~~~g~~p~~i~~spd 118 (361)
T 2oiz_A 52 NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISLPPKR---------VQGLNYDGLFRQTTD 118 (361)
T ss_dssp EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEECTTB---------CCBCCCGGGEEECTT
T ss_pred CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEcCccc---------cccCCCcceEEECCC
Confidence 68 9999887889999984 2456889885 2333 33332 1100 001247999999999
Q ss_pred CC-EEEEeCC-CCEEEEEeCCCCCceEEEE-ecc
Q 029556 115 GN-IYVADKS-NHVIRKITNLDHGNQLIRQ-INL 145 (191)
Q Consensus 115 G~-iyVaD~~-n~rIr~i~~~~~~~~~i~~-i~~ 145 (191)
|. +|++... .+.|..++.+.+ +.++. +..
T Consensus 119 g~~l~v~n~~~~~~v~v~d~~~~--~~~~~~i~~ 150 (361)
T 2oiz_A 119 GKFIVLQNASPATSIGIVDVAKG--DYVEDVTAA 150 (361)
T ss_dssp SSEEEEEEESSSEEEEEEETTTT--EEEEEEGGG
T ss_pred CCEEEEECCCCCCeEEEEECCCC--cEEEEEecC
Confidence 85 9999875 689999998765 45555 443
No 105
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.50 E-value=0.078 Score=45.12 Aligned_cols=88 Identities=6% Similarity=-0.102 Sum_probs=56.9
Q ss_pred CCeeeEEEecCCCeEEEEeCC---------CCeEEEEecCCCCCceE-EEEecCCCccCCCCCCcccccCCCceEEEcCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSS---------RSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK 114 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~---------n~~I~~~d~~~~~~g~v-~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~ 114 (191)
..| +++++|++..+||++.. .+.|.++|. .+.++ ..+. .+..+ ....-..|.+++++++
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~---~t~~~~~~i~-~~~~~------~~~~g~~p~~~~~spD 135 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP---VTFLPIADIE-LPDAP------RFDVGPYSWMNANTPN 135 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC---CCCcEEEEEE-CCCcc------ccccCCCccceEECCC
Confidence 468 99999888899999853 467888885 23322 2221 11000 0001147999999999
Q ss_pred CC-EEEEeCC-CCEEEEEeCCCCCceEEEE-eccC
Q 029556 115 GN-IYVADKS-NHVIRKITNLDHGNQLIRQ-INLK 146 (191)
Q Consensus 115 G~-iyVaD~~-n~rIr~i~~~~~~~~~i~~-i~~~ 146 (191)
|. +|++... ++.|..|| +++ +.++. +.++
T Consensus 136 G~~l~v~n~~~~~~v~viD-~t~--~~~~~~i~~~ 167 (373)
T 2mad_H 136 NADLLFFQFAAGPAVGLVV-QGG--SSDDQLLSSP 167 (373)
T ss_pred CCEEEEEecCCCCeEEEEE-CCC--CEEeEEcCCC
Confidence 75 9999864 68899999 665 44555 5443
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.45 E-value=0.1 Score=41.80 Aligned_cols=79 Identities=15% Similarity=0.201 Sum_probs=55.2
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC-
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS- 123 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~- 123 (191)
.|.+++++|++..+|++...++.|+.++. .+++.......+.. ...+-..|.+++++++|. +|++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~---~t~~~~~~~~~~~~-------~~~~~~~~~~~~~spdg~~l~~~~~~~ 113 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDL---DTCKNTFHANLSSV-------PGEVGRSMYSFAISPDGKEVYATVNPT 113 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEET---TTTEEEEEEESCCS-------TTEEEECSSCEEECTTSSEEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeC---CCCcEEEEEEcccc-------cccccccccceEECCCCCEEEEEcccc
Confidence 69999997555579999999999999986 35554433321100 011224689999999985 8888744
Q ss_pred ----------CCEEEEEeCCC
Q 029556 124 ----------NHVIRKITNLD 134 (191)
Q Consensus 124 ----------n~rIr~i~~~~ 134 (191)
++.|+.++.++
T Consensus 114 ~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 114 QRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EECSSCEEECCCEEEEEEGGG
T ss_pred cccccccccCCCeEEEEECCC
Confidence 57899999754
No 107
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.44 E-value=0.049 Score=44.50 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=54.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.++|+++. ++.||+++..+++++++|. .+.+ +..+. .+ + .+.|++.| .+.+|++| +.
T Consensus 66 fgeGi~~~--~~~ly~ltw~~~~v~v~D~---~tl~~~~ti~-~~------~--------~Gwglt~d-g~~L~vSd-gs 123 (243)
T 3mbr_X 66 FGAGIVAW--RDRLIQLTWRNHEGFVYDL---ATLTPRARFR-YP------G--------EGWALTSD-DSHLYMSD-GT 123 (243)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEET---TTTEEEEEEE-CS------S--------CCCEEEEC-SSCEEEEC-SS
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEEC---CcCcEEEEEe-CC------C--------CceEEeeC-CCEEEEEC-CC
Confidence 45777874 7899999999999999995 3444 33332 11 1 46788877 46899999 58
Q ss_pred CEEEEEeCCCCCceEEEEecc
Q 029556 125 HVIRKITNLDHGNQLIRQINL 145 (191)
Q Consensus 125 ~rIr~i~~~~~~~~~i~~i~~ 145 (191)
.+|..+|+++. +.++.+.+
T Consensus 124 ~~l~~iDp~t~--~~~~~I~V 142 (243)
T 3mbr_X 124 AVIRKLDPDTL--QQVGSIKV 142 (243)
T ss_dssp SEEEEECTTTC--CEEEEEEC
T ss_pred CeEEEEeCCCC--eEEEEEEE
Confidence 89999999775 34455554
No 108
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.39 E-value=0.053 Score=43.16 Aligned_cols=79 Identities=10% Similarity=0.069 Sum_probs=56.0
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++|++..+|++ ++.|+.++. .+++.......+ ..|.+++++++|+ +|++ ..
T Consensus 241 ~~~~~~~~s~dg~~l~~~---~~~v~~~d~---~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~-~~ 299 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGA---YNVLESFDL---EKNASIKRVPLP--------------HSYYSVNVSTDGSTVWLG-GA 299 (337)
T ss_dssp SCEEEEEECTTSSEEEEE---ESEEEEEET---TTTEEEEEEECS--------------SCCCEEEECTTSCEEEEE-SB
T ss_pred CceeeEEECCCCCEEEEe---CCeEEEEEC---CCCcCcceecCC--------------CceeeEEECCCCCEEEEE-cC
Confidence 468899998666778888 489999986 355543332211 2588999999987 7787 55
Q ss_pred CCEEEEEeCCCCCceEEEEeccC
Q 029556 124 NHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 124 n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
++.|+.++.++. +.++.+..+
T Consensus 300 ~~~i~v~d~~~~--~~~~~~~~~ 320 (337)
T 1pby_B 300 LGDLAAYDAETL--EKKGQVDLP 320 (337)
T ss_dssp SSEEEEEETTTC--CEEEEEECG
T ss_pred CCcEEEEECcCC--cEEEEEEcC
Confidence 789999998765 455555544
No 109
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.32 E-value=0.051 Score=46.30 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=55.0
Q ss_pred Ceee---EEEecCCCeEEEEeC---------CCCeEEEEecCCCCCceE-EEEecCCCccCCCCCCcccccCCCceEEEc
Q 029556 46 NPHS---VIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVD 112 (191)
Q Consensus 46 ~P~g---Iav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~v-~~~aG~~~~G~~DG~~~~a~f~~P~gIavD 112 (191)
.|.+ ++++++++.+||+.. ..+.|..+|. .++++ ..+. .+ ..|.+++++
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~---~t~~vv~~i~-~g--------------~~p~~i~~s 326 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG---LVGQTSSQIS-LG--------------HDVDAISVA 326 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC---CCCEEEEEEE-CC--------------CCcCeEEEC
Confidence 4655 888877889999754 2468999985 34444 4442 11 159999999
Q ss_pred CCCC--EEEEeCCCCEEEEEeCCCCCceEEEE
Q 029556 113 MKGN--IYVADKSNHVIRKITNLDHGNQLIRQ 142 (191)
Q Consensus 113 ~~G~--iyVaD~~n~rIr~i~~~~~~~~~i~~ 142 (191)
++|. +|++.++++.|..||.++. +.++.
T Consensus 327 ~Dg~~~l~v~~~~~~~V~ViD~~t~--~vv~~ 356 (373)
T 2mad_H 327 QDGGPDLYALSAGTEVLHIYDAGAG--DQDQS 356 (373)
T ss_pred CCCCeEEEEEcCCCCeEEEEECCCC--CEEee
Confidence 9987 7888878899999998765 34444
No 110
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.31 E-value=0.034 Score=44.42 Aligned_cols=76 Identities=9% Similarity=0.075 Sum_probs=55.0
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..|.+++++|++..+|+++..+++|..++++. .+++...+..... -..|.+++++++|. +|+++..
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~~~~~~ 104 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP-DDGALTFAAESAL------------PGSLTHISTDHQGQFVFVGSYN 104 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECT-TTCCEEEEEEEEC------------SSCCSEEEECTTSSEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecC-CCCceeecccccc------------CCCCcEEEEcCCCCEEEEEecC
Confidence 47999999866667999998888999887632 1344443321100 01689999999987 8899988
Q ss_pred CCEEEEEeCC
Q 029556 124 NHVIRKITNL 133 (191)
Q Consensus 124 n~rIr~i~~~ 133 (191)
++.|+.++..
T Consensus 105 ~~~i~~~d~~ 114 (343)
T 1ri6_A 105 AGNVSVTRLE 114 (343)
T ss_dssp TTEEEEEEEE
T ss_pred CCeEEEEECC
Confidence 8889988874
No 111
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.14 E-value=0.059 Score=44.56 Aligned_cols=81 Identities=12% Similarity=-0.033 Sum_probs=56.0
Q ss_pred eeEEEecCCCeEEEEeCC--CCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 48 HSVIDRPGSSDLIVLDSS--RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 48 ~gIav~d~~g~lyVaD~~--n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
+|+.++ ++.||++... +++|+++|+ .+|++..-...+. -....|++++. +.+|++.+.++
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~---~Tgkv~~~~~l~~------------~~FgeGit~~g-~~ly~ltw~~~ 107 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDI---ESGKTLQQIELGK------------RYFGEGISDWK-DKIVGLTWKNG 107 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECT---TTCCEEEEEECCT------------TCCEEEEEEET-TEEEEEESSSS
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEEC---CCCcEEEEEecCC------------ccceeEEEEeC-CEEEEEEeeCC
Confidence 999995 5799999865 459999986 4666444332210 01335678874 58999999999
Q ss_pred EEEEEeCCCCCceEEEEeccCCC
Q 029556 126 VIRKITNLDHGNQLIRQINLKPE 148 (191)
Q Consensus 126 rIr~i~~~~~~~~~i~~i~~~~~ 148 (191)
++.++|+++. +.++++..+.+
T Consensus 108 ~v~v~D~~t~--~~~~ti~~~~e 128 (262)
T 3nol_A 108 LGFVWNIRNL--RQVRSFNYDGE 128 (262)
T ss_dssp EEEEEETTTC--CEEEEEECSSC
T ss_pred EEEEEECccC--cEEEEEECCCC
Confidence 9999998664 55666666544
No 112
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.13 E-value=0.17 Score=45.14 Aligned_cols=73 Identities=8% Similarity=0.011 Sum_probs=54.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceE-EEEecCCCccCCCCCCcccccCCCceEEEcC----CCC-EEE
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDM----KGN-IYV 119 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v-~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~----~G~-iyV 119 (191)
.|++++++|++..+|+++.. +.|..+|.+. .++++ ..+. . | ..|.++++++ +|. +|+
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~-~t~~~~~~i~-~-------g-------~~p~~va~sp~~~~dg~~l~v 242 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLWA-KEPTKVAEIK-I-------G-------IEARSVESSKFKGYEDRYTIA 242 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETTS-SSCEEEEEEE-C-------C-------SEEEEEEECCSTTCTTTEEEE
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECcC-CCCcEEEEEe-c-------C-------CCcceEEeCCCcCCCCCEEEE
Confidence 49999998777889999987 8999998621 23442 2222 1 1 1589999998 875 899
Q ss_pred EeCCCCEEEEEeCCCC
Q 029556 120 ADKSNHVIRKITNLDH 135 (191)
Q Consensus 120 aD~~n~rIr~i~~~~~ 135 (191)
+....+.|..+|..+.
T Consensus 243 ~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 243 GAYWPPQFAIMDGETL 258 (543)
T ss_dssp EEEESSEEEEEETTTC
T ss_pred EEccCCeEEEEecccc
Confidence 9887889999987553
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.08 E-value=0.28 Score=40.80 Aligned_cols=74 Identities=8% Similarity=0.058 Sum_probs=53.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeC-
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK- 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~- 122 (191)
..|.+++++|++..+|++....+.|+.+|. .+++....... + ..|.+++++++|. ++++..
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~---~~~~~~~~~~~-------~-------~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDR---KTKLEIRKTDK-------I-------GLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEET---TTTEEEEECCC-------C-------SEEEEEEECTTSSEEEEEEEE
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEEC---CCCcEEEEecC-------C-------CCceEEEEcCCCCEEEEEECC
Confidence 478999998767788899988899999986 34554332211 0 1378999999884 777764
Q ss_pred ------CCCEEEEEeCCCC
Q 029556 123 ------SNHVIRKITNLDH 135 (191)
Q Consensus 123 ------~n~rIr~i~~~~~ 135 (191)
.++.|+.++..++
T Consensus 275 ~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp SCTTCSCCEEEEEEETTTT
T ss_pred CCccccCCCeEEEEECCCC
Confidence 3568889987654
No 114
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=95.97 E-value=0.022 Score=52.28 Aligned_cols=62 Identities=8% Similarity=0.030 Sum_probs=47.9
Q ss_pred CCCeeeEEEecCCCeEEE-EeCC-----------CCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEE
Q 029556 44 EINPHSVIDRPGSSDLIV-LDSS-----------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAV 111 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyV-aD~~-----------n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIav 111 (191)
++.|.+|+++ ++|+||| +|.. ++.+++++. .+|+++.++... .+..|+|+++
T Consensus 475 fnsPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp---~tGel~~fl~~P------------~~aEpnGiaf 538 (592)
T 4a9v_A 475 FNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADP---ATGEIRRFMVGP------------IGCEVTGISF 538 (592)
T ss_dssp CCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECT---TTCCEEEEEECC------------TTCEEEEEEE
T ss_pred cCCCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeC---CCCeEEEEEeCC------------CCccccCCEE
Confidence 6899999994 8899999 8864 568999874 368888877321 1346899999
Q ss_pred cCCC-CEEEEe
Q 029556 112 DMKG-NIYVAD 121 (191)
Q Consensus 112 D~~G-~iyVaD 121 (191)
.+++ .|||+-
T Consensus 539 SPD~ktLfV~v 549 (592)
T 4a9v_A 539 SPDQKTLFVGI 549 (592)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 9996 488884
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.94 E-value=0.023 Score=52.29 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=65.0
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCC---CceE---EEEecCCCccCCCCCCcccccCCCceEEEcCCCCEE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE---ESVV---KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIY 118 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~---~g~v---~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iy 118 (191)
..|+|+.++|++..+||++...++|..+|.+..+ +|++ ..+...... | ..|..+++|++|++|
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v----G-------~gP~h~aF~~dG~aY 345 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL----G-------LGPLHTAFDGRGNAY 345 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC----C-------SCEEEEEECTTSEEE
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC----C-------CCcceEEECCCCeEE
Confidence 4899999998888899999999999999873100 0100 001111111 1 269999999999999
Q ss_pred EEeCCCCEEEEEeCCC--------CCceEEEEeccC
Q 029556 119 VADKSNHVIRKITNLD--------HGNQLIRQINLK 146 (191)
Q Consensus 119 VaD~~n~rIr~i~~~~--------~~~~~i~~i~~~ 146 (191)
++-...+.|.+++.+. ...+.+.++...
T Consensus 346 ~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 346 TSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred EEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 9999999999999744 224677777765
No 116
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.92 E-value=0.035 Score=48.78 Aligned_cols=78 Identities=12% Similarity=0.187 Sum_probs=57.3
Q ss_pred Ceee---EEEecCCCeEEEEeC---------CCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEc
Q 029556 46 NPHS---VIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVD 112 (191)
Q Consensus 46 ~P~g---Iav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD 112 (191)
.|.+ ++++++++.+||++. ..+.|..+|. .+.+ +..+... ..|++|+++
T Consensus 317 ~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~---~T~kvv~~I~vg---------------~~P~gia~s 378 (426)
T 3c75_H 317 RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA---ETGERINKIELG---------------HEIDSINVS 378 (426)
T ss_dssp EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET---TTCCEEEEEEEE---------------EEECEEEEC
T ss_pred ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC---CCCeEEEEEECC---------------CCcCeEEEc
Confidence 4666 899877889999974 2357999986 3333 4443210 159999999
Q ss_pred CCCC--EEEEeCCCCEEEEEeCCCCCceEEEEe
Q 029556 113 MKGN--IYVADKSNHVIRKITNLDHGNQLIRQI 143 (191)
Q Consensus 113 ~~G~--iyVaD~~n~rIr~i~~~~~~~~~i~~i 143 (191)
++|. +|++.+.++.|-.||..+. +.++.|
T Consensus 379 pDg~~~lyv~n~~s~~VsVID~~t~--kvv~tI 409 (426)
T 3c75_H 379 QDAEPLLYALSAGTQTLHIYDAATG--EELRSV 409 (426)
T ss_dssp CSSSCEEEEEETTTTEEEEEETTTC--CEEEEE
T ss_pred cCCCEEEEEEcCCCCeEEEEECCCC--CEEEEe
Confidence 9986 8999998999999999765 455555
No 117
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.90 E-value=0.26 Score=44.53 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=53.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEc----CCC-CEE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVD----MKG-NIY 118 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD----~~G-~iy 118 (191)
..|++++++|++..+|++.. .+.|.++|... .+++ +..+. . | ..|.+++++ ++| .+|
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~-~t~~~v~~i~-~-------G-------~~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGR-DGKVNMIDLWM-KEPTTVAEIK-I-------G-------SEARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp SCEEEEEECTTSCEEEEEET-TSEEEEEETTS-SSCCEEEEEE-C-------C-------SEEEEEEECCSTTCTTTEEE
T ss_pred CCccceEECCCCCEEEEEcC-CCeEEEEECCC-CCCcEeEEEe-c-------C-------CCCceeEEccccCCCCCEEE
Confidence 37999999877778999974 56899998620 1333 22221 1 1 158999999 477 599
Q ss_pred EEeCCCCEEEEEeCCCC
Q 029556 119 VADKSNHVIRKITNLDH 135 (191)
Q Consensus 119 VaD~~n~rIr~i~~~~~ 135 (191)
++....+.|..+|..+.
T Consensus 260 v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 260 AGAYWPPQYVIMDGETL 276 (567)
T ss_dssp EEEEETTEEEEEETTTC
T ss_pred EEEccCCeEEEEECCCC
Confidence 99999999999997553
No 118
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.85 E-value=0.13 Score=43.08 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=53.9
Q ss_pred Ceee---EEEecCCCeEEEEeC----------CCCeEEEEecCCCCCceE-EEEecCCCccCCCCCCcccccCCCceEEE
Q 029556 46 NPHS---VIDRPGSSDLIVLDS----------SRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAV 111 (191)
Q Consensus 46 ~P~g---Iav~d~~g~lyVaD~----------~n~~I~~~d~~~~~~g~v-~~~aG~~~~G~~DG~~~~a~f~~P~gIav 111 (191)
.|.+ ++++++++.+||+.. ..+.|..+|. .++++ ..+.. + . |.+|++
T Consensus 252 ~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~---~t~~~v~~i~~--------~-----~---p~~ia~ 312 (361)
T 2oiz_A 252 VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT---KTKQRVARIPG--------R-----D---ALSMTI 312 (361)
T ss_dssp EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET---TTTEEEEEEEC--------T-----T---CCEEEE
T ss_pred ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC---CCCcEEEEEec--------C-----C---eeEEEE
Confidence 3555 899877799999864 2458999985 34543 33321 1 1 999999
Q ss_pred cCCCC-EEEEeCCCCEEEEEeCCCCCceEEEEe
Q 029556 112 DMKGN-IYVADKSNHVIRKITNLDHGNQLIRQI 143 (191)
Q Consensus 112 D~~G~-iyVaD~~n~rIr~i~~~~~~~~~i~~i 143 (191)
+++|. +|++.. +.|..+|.+++.-+.++.+
T Consensus 313 spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 313 DQQRNLMLTLDG--GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp ETTTTEEEEECS--SCEEEEECSSSSCEEEEEE
T ss_pred CCCCCEEEEeCC--CeEEEEECCCCcceeeEEe
Confidence 99986 888875 8899999876533556665
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.82 E-value=0.2 Score=41.70 Aligned_cols=73 Identities=21% Similarity=0.320 Sum_probs=54.2
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n 124 (191)
.|.+++++|++..+|++...+++|+.++. .+++....... -..|.+++++++|. +|++...+
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~---~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDL---KEKKVQKSIPV--------------FDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEET---TTTEEEEEEEC--------------SSSEEEEEECTTSSEEEEEECCC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEEC---CCCcEEEEecC--------------CCCCCeEEEcCCCCEEEEEecCC
Confidence 68899997555589999999999999986 34554433321 12478999999986 88888764
Q ss_pred --------------CEEEEEeCCCC
Q 029556 125 --------------HVIRKITNLDH 135 (191)
Q Consensus 125 --------------~rIr~i~~~~~ 135 (191)
++|+.++..+.
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred CccccccccccccceEEEEEECCCC
Confidence 38999998654
No 120
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.58 E-value=0.15 Score=45.35 Aligned_cols=77 Identities=12% Similarity=0.063 Sum_probs=47.6
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCC-CccCCCCCCcccccCCCceEEEcCCCC-EEEEe
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDG-VQGYSDGEPGSARFDKPKSFAVDMKGN-IYVAD 121 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~-~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD 121 (191)
..|.+|.+++++..|||++.+.+.|..++.+-..+.++.-.+-.+ .....+-......-..|.+++++++|. +|+|.
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 569999999888899999999999999986311122222222111 000000000000113699999999985 99997
No 121
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.41 E-value=0.051 Score=47.28 Aligned_cols=63 Identities=13% Similarity=0.161 Sum_probs=47.0
Q ss_pred eeEEEecCCCeEEEEeCCCCeEEEEecCC-C-CCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPL-S-EESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 48 ~gIav~d~~g~lyVaD~~n~~I~~~d~~~-~-~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
.++++||.+|+||+++..++.|.+.+.+- . ..++..+++-. + ++..|+++++|.+|.||+.-.
T Consensus 278 ~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d-----------~-~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 278 IALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS-----------S-RFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC-----------T-TCCSEEEEEECTTSCEEEEEC
T ss_pred ceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC-----------C-CccccCeEEECCCCeEEEEEC
Confidence 35677557999999999999999998521 0 00345666532 3 788999999999999999753
No 122
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.31 E-value=0.28 Score=42.57 Aligned_cols=87 Identities=13% Similarity=0.038 Sum_probs=57.4
Q ss_pred CCCCeeeEEEecCCCeEEEEeCCC---------------CeEEEEecCCCCC--ceEEEEecCCCccCCCCCCcccccCC
Q 029556 43 LEINPHSVIDRPGSSDLIVLDSSR---------------SAFYTLSFPLSEE--SVVKRLAGDGVQGYSDGEPGSARFDK 105 (191)
Q Consensus 43 ~~~~P~gIav~d~~g~lyVaD~~n---------------~~I~~~d~~~~~~--g~v~~~aG~~~~G~~DG~~~~a~f~~ 105 (191)
.+...+++.+ |..+.|||.|++. -+|..+|+ ..+ ..++.+. -+..-. ... ..
T Consensus 85 ~lvsV~~v~i-D~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL--~t~~~~li~~y~-~p~~~~----~~~---S~ 153 (381)
T 3q6k_A 85 ELTSIYQPVI-DDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDL--KQPNYPEVVRYY-FPTRLV----EKP---TY 153 (381)
T ss_dssp SSSCEEEEEE-CTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEES--SSTTCCEEEEEE-CCGGGC----CCG---GG
T ss_pred ceEEeeEEEE-cCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEEC--CCCCceeEEEEE-CCHHhc----ccC---Cc
Confidence 3568999999 5899999999883 25778876 234 3444443 111000 001 23
Q ss_pred CceEEEc-C-------CCCEEEEeCCCCEEEEEeCCCCCceEE
Q 029556 106 PKSFAVD-M-------KGNIYVADKSNHVIRKITNLDHGNQLI 140 (191)
Q Consensus 106 P~gIavD-~-------~G~iyVaD~~n~rIr~i~~~~~~~~~i 140 (191)
-..|++| . ++.+||+|.+...|.+++..++..-++
T Consensus 154 l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 196 (381)
T 3q6k_A 154 FGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNV 196 (381)
T ss_dssp EEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEE
Confidence 4578888 2 467999999999999999977644333
No 123
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.29 E-value=0.11 Score=45.24 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=59.1
Q ss_pred Ceee---EEEecCCCeEEEEeC---------CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC
Q 029556 46 NPHS---VIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (191)
Q Consensus 46 ~P~g---Iav~d~~g~lyVaD~---------~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~ 113 (191)
.|.+ +++++..+.+||+.. ..++|..+|. .++++....-.+ ..|++|++++
T Consensus 278 ~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~---~t~kv~~~i~vg--------------~~~~~lavs~ 340 (386)
T 3sjl_D 278 RPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA---KTGERLAKFEMG--------------HEIDSINVSQ 340 (386)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET---TTCCEEEEEEEE--------------EEECEEEECS
T ss_pred cCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC---CCCeEEEEEECC--------------CCcceEEECC
Confidence 3545 888888999999863 2368999986 445433332111 1588999999
Q ss_pred CCC--EEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 114 KGN--IYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 114 ~G~--iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
+|. +|++...++.|-.+|.+.. +.++.+..+
T Consensus 341 D~~~~ly~tn~~~~~VsViD~~t~--k~~~~i~~~ 373 (386)
T 3sjl_D 341 DEKPLLYALSTGDKTLYIHDAESG--EELRSVNQL 373 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEETTTC--CEEEEECCC
T ss_pred CCCeEEEEEcCCCCeEEEEECCCC--cEEEEecCC
Confidence 984 8899998999999998765 566777655
No 124
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.28 E-value=0.084 Score=45.33 Aligned_cols=81 Identities=10% Similarity=0.147 Sum_probs=56.8
Q ss_pred Ceee---EEEecCCCeEEEEeC---C-----CCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC
Q 029556 46 NPHS---VIDRPGSSDLIVLDS---S-----RSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (191)
Q Consensus 46 ~P~g---Iav~d~~g~lyVaD~---~-----n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~ 113 (191)
.|.+ ++++++++.+||+.. + ...+..+|. .+++ +..+. .+ ..|+||++++
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~---~t~~vv~~i~-vg--------------~~p~gi~~s~ 323 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA---SVGQTSGPIS-NG--------------HDSDAIIAAQ 323 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES---SSCCEEECCE-EE--------------EEECEEEECC
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEEC---CCCeEEEEEE-CC--------------CCcceEEECC
Confidence 5666 889878889999865 2 235558875 2333 22221 10 1599999999
Q ss_pred CCC-EEEEeC-CCCEEEEEeCCCCCceEEEEeccC
Q 029556 114 KGN-IYVADK-SNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 114 ~G~-iyVaD~-~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
+|. +|++-. ..+.|..||.+.. +.++.|...
T Consensus 324 Dg~~l~va~~~~~~~VsVID~~t~--kvv~~I~vg 356 (368)
T 1mda_H 324 DGASDNYANSAGTEVLDIYDAASD--QDQSSVELD 356 (368)
T ss_dssp SSSCEEEEEETTTTEEEEEESSSC--EEEEECCCC
T ss_pred CCCEEEEEccCCCCeEEEEECCCC--cEEEEEECC
Confidence 986 899887 6899999999765 566777655
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.00 E-value=0.4 Score=42.75 Aligned_cols=75 Identities=11% Similarity=0.088 Sum_probs=55.5
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n 124 (191)
.|.+++++++++.+|++....++|..++..-...-.+..+. . -..|++++++++|. +|++....
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~--------------~~~~~~~~~spdg~~l~va~~~~ 345 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-A--------------APFLHDGGWDSSHRYFMTAANNS 345 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-C--------------CSSCCCEEECTTSCEEEEEEGGG
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-c--------------CcCccCceECCCCCEEEEEecCC
Confidence 56789998778899999999999999986311111122221 1 12689999999997 78898888
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|..+|..++
T Consensus 346 ~~v~v~D~~tg 356 (543)
T 1nir_A 346 NKVAVIDSKDR 356 (543)
T ss_dssp TEEEEEETTTT
T ss_pred CeEEEEECCCC
Confidence 89999998765
No 126
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.59 E-value=0.15 Score=41.46 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=52.9
Q ss_pred EEEEEEcCccCCCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-------ceEEEEecCCCccCCCCCCcccccCC
Q 029556 33 TVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-------SVVKRLAGDGVQGYSDGEPGSARFDK 105 (191)
Q Consensus 33 ~~~~~~~G~~~~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-------g~v~~~aG~~~~G~~DG~~~~a~f~~ 105 (191)
..+++..+ ...+.+.+|++ ++|.||.+ .+..+++++. ++ +. .+.+|.. |. +.
T Consensus 31 ~a~~iG~~--gw~~~~~laf~-P~G~LYaV--~~G~Ly~~~~---~t~~~~~W~~s-~t~IG~~--Gw----------~~ 89 (236)
T 1tl2_A 31 RATLIGKG--GWSNFKFLFLS-PGGELYGV--LNDKIYKGTP---PTHDNDNWMGR-AKKIGNG--GW----------NQ 89 (236)
T ss_dssp HSEEEESS--SCTTCSEEEEC-TTSCEEEE--ETTEEEEESC---CCSTTCCHHHH-CEEEECS--CG----------GG
T ss_pred hccccCcc--ccccceeEEEC-CCccEEEE--eCCeEEEECC---CCCCccccccc-ccEeccc--cc----------cc
Confidence 44555431 23477899996 59999988 6668999985 23 22 3334431 11 11
Q ss_pred CceEEEcCCCCEEEEeCCCCEEEEEeCCC
Q 029556 106 PKSFAVDMKGNIYVADKSNHVIRKITNLD 134 (191)
Q Consensus 106 P~gIavD~~G~iyVaD~~n~rIr~i~~~~ 134 (191)
=..+.+|++|+||.. .+.+|.|+++.+
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 246899999999998 448999999844
No 127
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.40 E-value=0.11 Score=46.03 Aligned_cols=93 Identities=16% Similarity=0.218 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCccCCCCeeeEEEecCCC--eEEEEeCCCCeEEEEecCCCCCceE--EEEecCCCccCCCCCCcccccCC
Q 029556 30 DGYTVTTVIDGHQLEINPHSVIDRPGSS--DLIVLDSSRSAFYTLSFPLSEESVV--KRLAGDGVQGYSDGEPGSARFDK 105 (191)
Q Consensus 30 dGy~~~~~~~G~~~~~~P~gIav~d~~g--~lyVaD~~n~~I~~~d~~~~~~g~v--~~~aG~~~~G~~DG~~~~a~f~~ 105 (191)
+||.++++++|.. +|.+|++. ++| .+||++.. .+|++++. +|.. ..+++... -..+|. .......
T Consensus 2 ~gf~v~~va~gL~---~P~~~a~~-pdG~~rl~V~er~-G~i~~~~~----~g~~~~~~~~~~~~-~~~~g~-~~~~e~G 70 (463)
T 2wg3_C 2 NCFCIQEVVSGLR---QPVGALHS-GDGSQRLFILEKE-GYVKILTP----EGEIFKEPYLDIHK-LVQSGI-KGGDERG 70 (463)
T ss_dssp CCEEEEEEEEEES---SEEEEECC-SSSSCCEEEEETT-TEEEEECT----TSCBCSSCSEECTT-TBCCCC-SSSCCCS
T ss_pred CceEEEEeccCCC---CceEEEEC-CCCCeEEEEEeCC-ceEEEEeC----CCCeeeeeecCCcc-eeccCc-cccCCCc
Confidence 5789999999876 99999996 555 59999974 68999863 3321 12222110 011110 0011235
Q ss_pred CceEEEcCC----CCEEEEeCC--C----------CEEEEEeCC
Q 029556 106 PKSFAVDMK----GNIYVADKS--N----------HVIRKITNL 133 (191)
Q Consensus 106 P~gIavD~~----G~iyVaD~~--n----------~rIr~i~~~ 133 (191)
+.||+++++ |.||++-+. . .+|.++...
T Consensus 71 llgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~ 114 (463)
T 2wg3_C 71 LLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVS 114 (463)
T ss_dssp EEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBC
T ss_pred ceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEc
Confidence 679999985 889997532 1 377777764
No 128
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.27 E-value=0.3 Score=40.54 Aligned_cols=67 Identities=9% Similarity=0.048 Sum_probs=42.1
Q ss_pred EEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEeCCC-CEEE
Q 029556 51 IDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSN-HVIR 128 (191)
Q Consensus 51 av~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD~~n-~rIr 128 (191)
++++.+++||.+|.+..+|+++++ ..+..+.+.. + |..+.+++ .|.||.+|+.+ .+|.
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l---~g~~~~~l~~--------~---------~~~~~~~P~g~~iy~t~~~~~~~I~ 210 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDT---ASQSEALFYD--------C---------NCYKPVVLDDTNVYYMDVNRDNAIV 210 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEET---TTTEEEEEEC--------S---------CEEEEEEEETTEEEEEEGGGTTEEE
T ss_pred EeeEECCEEEEEeCCCceEEEEEC---CCCCEEEEeC--------C---------CccceeeecCCEEEEEEcCCCcEEE
Confidence 345568899999998999999986 2333344321 1 11123443 46788888653 5788
Q ss_pred EEeCCCCCc
Q 029556 129 KITNLDHGN 137 (191)
Q Consensus 129 ~i~~~~~~~ 137 (191)
+++.++...
T Consensus 211 ~~~ldG~~~ 219 (302)
T 3s25_A 211 HVNINNPNP 219 (302)
T ss_dssp EECSSSCCC
T ss_pred EEECCCCCe
Confidence 888766443
No 129
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.06 E-value=0.39 Score=41.36 Aligned_cols=76 Identities=12% Similarity=0.223 Sum_probs=49.0
Q ss_pred CCeeeEEE--ecCCCe--EEEEeCCCCeEEEEecCCCCCceEE-EEecCCCccCCCCCCcccccCCCceEEEcCC-CCEE
Q 029556 45 INPHSVID--RPGSSD--LIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIY 118 (191)
Q Consensus 45 ~~P~gIav--~d~~g~--lyVaD~~n~~I~~~d~~~~~~g~v~-~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~-G~iy 118 (191)
..|+|+|. ++.++. +||.+.. +++..+++..+.+|.+. ..+.. +.-| ..|.|+++|++ |.||
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~----f~lg-------sq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRA----FKMN-------SQTEGMAADDEYGRLY 195 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEE----EECS-------SCEEEEEEETTTTEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEE----ecCC-------CCcceEEEcCCCCeEE
Confidence 68999999 655564 7777766 68877665322334211 11111 0001 26899999975 8999
Q ss_pred EEeCCCCEEEEEeCC
Q 029556 119 VADKSNHVIRKITNL 133 (191)
Q Consensus 119 VaD~~n~rIr~i~~~ 133 (191)
+++.. ..|++++.+
T Consensus 196 v~eEd-~GIw~~da~ 209 (355)
T 3amr_A 196 IAEED-EAIWKFSAE 209 (355)
T ss_dssp EEETT-TEEEEEECS
T ss_pred Eeccc-ceEEEEeCC
Confidence 99987 459999953
No 130
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=92.65 E-value=2.6 Score=37.40 Aligned_cols=98 Identities=8% Similarity=-0.006 Sum_probs=62.4
Q ss_pred CCeeeEEE--ecCCCeEEEEeC-----CCCeEEEEecCCCCCceEEEE--ecCCCccCCCCCCc------ccccCCCceE
Q 029556 45 INPHSVID--RPGSSDLIVLDS-----SRSAFYTLSFPLSEESVVKRL--AGDGVQGYSDGEPG------SARFDKPKSF 109 (191)
Q Consensus 45 ~~P~gIav--~d~~g~lyVaD~-----~n~~I~~~d~~~~~~g~v~~~--aG~~~~G~~DG~~~------~a~f~~P~gI 109 (191)
..|..|.+ +|++...||+.. .++.|..+..+ +|..... +....... .+... .+.-+.|.+|
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d---~g~~~~~~vIdi~~~~v-~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE---DGKWNAEKVIEIPAEPL-EGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE---TTEEEEEEEEEECCEEC-CSSCCGGGGGGTEECCCCCCE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec---CCceeEEEEEeCCCccc-cccccccccccccCCCceeEE
Confidence 36888877 777888999988 88888887753 2432211 11111000 01000 0112579999
Q ss_pred EEcCCCC-EEEEeCCCCEEEEEeCCCCC-ceEEEEeccC
Q 029556 110 AVDMKGN-IYVADKSNHVIRKITNLDHG-NQLIRQINLK 146 (191)
Q Consensus 110 avD~~G~-iyVaD~~n~rIr~i~~~~~~-~~~i~~i~~~ 146 (191)
.++++|. +||+.++.+.|+.++-.+.. .+.+..+...
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECB
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeC
Confidence 9999985 99999999999999975443 3555555543
No 131
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.24 E-value=1.2 Score=40.13 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=50.1
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCCCEEEEEeCC
Q 029556 55 GSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNHVIRKITNL 133 (191)
Q Consensus 55 ~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n~rIr~i~~~ 133 (191)
.++.+||+....+.|..+|. .++++......+ ..|++++++++|. +|++.. .+.|.+||..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~---~t~~v~~~i~~g--------------~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~ 226 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDG---STYEIKTVLDTG--------------YAVHISRLSASGRYLFVIGR-DGKVNMIDLW 226 (567)
T ss_dssp GGGEEEEEETTTTEEEEEET---TTCCEEEEEECS--------------SCEEEEEECTTSCEEEEEET-TSEEEEEETT
T ss_pred CCceEEEEeCCCCeEEEEEC---CCCeEEEEEeCC--------------CCccceEECCCCCEEEEEcC-CCeEEEEECC
Confidence 46689999999999999995 345444333221 1588999999986 899875 5689999985
Q ss_pred CCCceEEEEecc
Q 029556 134 DHGNQLIRQINL 145 (191)
Q Consensus 134 ~~~~~~i~~i~~ 145 (191)
....+.++.+..
T Consensus 227 ~~t~~~v~~i~~ 238 (567)
T 1qks_A 227 MKEPTTVAEIKI 238 (567)
T ss_dssp SSSCCEEEEEEC
T ss_pred CCCCcEeEEEec
Confidence 112244445543
No 132
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.07 E-value=0.9 Score=40.12 Aligned_cols=81 Identities=17% Similarity=0.077 Sum_probs=50.1
Q ss_pred CCeeeEEEec------CCCeEEEEeCCCCeEEEEecCCCC-CceEEEE-ecCCCccCCCCCCcccccCCCceEEEcCCCC
Q 029556 45 INPHSVIDRP------GSSDLIVLDSSRSAFYTLSFPLSE-ESVVKRL-AGDGVQGYSDGEPGSARFDKPKSFAVDMKGN 116 (191)
Q Consensus 45 ~~P~gIav~d------~~g~lyVaD~~n~~I~~~d~~~~~-~g~v~~~-aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~ 116 (191)
..|.|+++-. -.+.++++|.. ++|+++.++... ......+ .|... ..+ .....+|.+++++++|.
T Consensus 276 ~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~--~~~----~~~~~r~~~v~~~pdG~ 348 (463)
T 2wg3_C 276 GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSG--SCR----GYFSGHILGFGEDELGE 348 (463)
T ss_dssp -CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEETT--SSC----SCCCSEEEEEEECTTCC
T ss_pred ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCcc--ccc----ccccCcceEEEECCCCC
Confidence 3678888841 24568999987 789888753110 1122233 23110 000 11234799999999999
Q ss_pred EEEEeC-------CCCEEEEEeC
Q 029556 117 IYVADK-------SNHVIRKITN 132 (191)
Q Consensus 117 iyVaD~-------~n~rIr~i~~ 132 (191)
|||+|. .+++|.|+..
T Consensus 349 Lyv~~~~~~~~~~~~G~I~Ri~~ 371 (463)
T 2wg3_C 349 VYILSSSKSMTQTHNGKLYKIVD 371 (463)
T ss_dssp EEEEEESSCGGGCSSEEEEEEEC
T ss_pred EEEEeccCCcccCCCCcEEEecC
Confidence 999996 5789999983
No 133
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.74 E-value=5.1 Score=31.56 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=41.9
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCCE
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~r 126 (191)
...+++ +.++.+|++. +.+++++ ++|+.......+ -+....+++|++|++|++.. ++.
T Consensus 179 ~~~~~~-d~~g~l~v~t---~~l~~~d----~~g~~~~~~~~~-------------~~~~~~~~~~~~g~l~v~t~-~~g 236 (330)
T 3hxj_A 179 TSAASI-GKDGTIYFGS---DKVYAIN----PDGTEKWNFYAG-------------YWTVTRPAISEDGTIYVTSL-DGH 236 (330)
T ss_dssp CSCCEE-CTTCCEEEES---SSEEEEC----TTSCEEEEECCS-------------SCCCSCCEECTTSCEEEEET-TTE
T ss_pred eeeeEE-cCCCEEEEEe---CEEEEEC----CCCcEEEEEccC-------------CcceeceEECCCCeEEEEcC-CCe
Confidence 345566 3677777776 6677776 244433322110 13467889999999999975 467
Q ss_pred EEEEeCCC
Q 029556 127 IRKITNLD 134 (191)
Q Consensus 127 Ir~i~~~~ 134 (191)
|.++++.+
T Consensus 237 l~~~~~~g 244 (330)
T 3hxj_A 237 LYAINPDG 244 (330)
T ss_dssp EEEECTTS
T ss_pred EEEECCCC
Confidence 88887644
No 134
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.20 E-value=5.7 Score=31.26 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=45.9
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....+++ +.++.+|++.. ++.+++++ ++|......... + ..+..+++|++|+||++.. ++
T Consensus 216 ~~~~~~~-~~~g~l~v~t~-~~gl~~~~----~~g~~~~~~~~~------~-------~~~~~~~~~~~g~l~v~t~-~g 275 (330)
T 3hxj_A 216 TVTRPAI-SEDGTIYVTSL-DGHLYAIN----PDGTEKWRFKTG------K-------RIESSPVIGNTDTIYFGSY-DG 275 (330)
T ss_dssp CCSCCEE-CTTSCEEEEET-TTEEEEEC----TTSCEEEEEECS------S-------CCCSCCEECTTSCEEEECT-TC
T ss_pred ceeceEE-CCCCeEEEEcC-CCeEEEEC----CCCCEeEEeeCC------C-------CccccceEcCCCeEEEecC-CC
Confidence 4677888 47889999875 45788886 355433332211 0 1234578898999999975 45
Q ss_pred EEEEEeCCC
Q 029556 126 VIRKITNLD 134 (191)
Q Consensus 126 rIr~i~~~~ 134 (191)
.|.++++.+
T Consensus 276 gl~~~d~~g 284 (330)
T 3hxj_A 276 HLYAINPDG 284 (330)
T ss_dssp EEEEECTTS
T ss_pred CEEEECCCC
Confidence 899999743
No 135
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.43 E-value=1.8 Score=39.72 Aligned_cols=91 Identities=8% Similarity=0.064 Sum_probs=58.4
Q ss_pred CeeeEEEec-----CCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEc--CC-CCE
Q 029556 46 NPHSVIDRP-----GSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVD--MK-GNI 117 (191)
Q Consensus 46 ~P~gIav~d-----~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD--~~-G~i 117 (191)
.|+ ++.+. ++..+||+|..|+||.++|+ ...++.-+...+. | ..|+|+++. ++ +.+
T Consensus 87 ~hh-~~~s~t~g~~DG~~lfVnd~~~~rVavIdl---~t~~~~~ii~ip~-----g-------~~phg~~~~~~p~~~~v 150 (595)
T 1fwx_A 87 LHH-VHMSFTEGKYDGRFLFMNDKANTRVARVRC---DVMKCDAILEIPN-----A-------KGIHGLRPQKWPRSNYV 150 (595)
T ss_dssp BCC-EEEEEETTEEEEEEEEEEETTTTEEEEEET---TTTEEEEEEECSS-----C-------CSEEEEEECCSSBCSEE
T ss_pred CCc-cccCCCCCCcCCCEEEEEcCCCCEEEEEEC---CCceEeeEEeCCC-----C-------CCCcceeeeecCCCcEE
Confidence 344 56653 46689999999999999997 3444444332211 1 158999984 45 568
Q ss_pred EEEe-----------------CCCCEEEEEeCCCCCceEEEEeccC--CCceEecc
Q 029556 118 YVAD-----------------KSNHVIRKITNLDHGNQLIRQINLK--PEDCSKSS 154 (191)
Q Consensus 118 yVaD-----------------~~n~rIr~i~~~~~~~~~i~~i~~~--~~~~~~~~ 154 (191)
|++. ...+.+-.||.+.. +.+.++.++ ++.++.++
T Consensus 151 ~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~--~v~~qI~Vgg~pd~~~~sp 204 (595)
T 1fwx_A 151 FCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKW--EVAWQVLVSGNLDNCDADY 204 (595)
T ss_dssp EEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTT--EEEEEEEESSCCCCEEECS
T ss_pred EEecccccccCCCCcccccccccCceEEEEECCCC--eEEEEEEeCCCccceEECC
Confidence 8884 44457888888754 555666553 45555544
No 136
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.21 E-value=0.77 Score=38.06 Aligned_cols=64 Identities=8% Similarity=0.145 Sum_probs=38.1
Q ss_pred EEecCCCeEEEEe---CCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCCE
Q 029556 51 IDRPGSSDLIVLD---SSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (191)
Q Consensus 51 av~d~~g~lyVaD---~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~r 126 (191)
++++.++.||.+| .++..|+++++ +|. .+.+..... .| +..+ .+.||++|.+..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~----dGs~~~~lt~~~~--------------~~--~~~~-g~~iy~t~~g~~~ 168 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRI----DGEEKKKIKNHYL--------------FT--CNTS-DRYFYYNNPKNGQ 168 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEET----TSCCCEEEESSCC--------------CC--SEEE-TTEEEEECTTTCC
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEEC----CCCCeEEEeCCCc--------------eE--eeEE-CCEEEEEeCCCce
Confidence 4555688999999 78899999986 332 333332110 11 1223 2457777666667
Q ss_pred EEEEeCCCC
Q 029556 127 IRKITNLDH 135 (191)
Q Consensus 127 Ir~i~~~~~ 135 (191)
|.+++.+++
T Consensus 169 Iy~~~l~g~ 177 (302)
T 3s25_A 169 LYRYDTASQ 177 (302)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 777766543
No 137
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=84.43 E-value=17 Score=30.32 Aligned_cols=75 Identities=9% Similarity=0.004 Sum_probs=48.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
.-..++++|.+++++++-...+.|+..|+ ..+....+...... -.....++++++|.+.++-..++
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~---~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDF---KGNILRVFASSDTI-----------NIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEET---TSCEEEEEECCSSC-----------SCCCCCEEEETTTTEEEEECSSS
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeec---cCCceeEEeccCCC-----------CccEEEEEECCCCCEEEEEeCCC
Confidence 34789997667888888788889999986 23445554432110 01234577777777766666667
Q ss_pred EEEEEeCCC
Q 029556 126 VIRKITNLD 134 (191)
Q Consensus 126 rIr~i~~~~ 134 (191)
.|+..+..+
T Consensus 232 ~i~~wd~~~ 240 (435)
T 4e54_B 232 NVILLNMDG 240 (435)
T ss_dssp BEEEEESSS
T ss_pred cEeeeccCc
Confidence 777777643
No 138
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.79 E-value=14 Score=33.68 Aligned_cols=74 Identities=8% Similarity=0.063 Sum_probs=47.3
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....++. |.+++||++.. +-+++++. .++++..+..... . ...-+.+..|+.|++|+||++-.++
T Consensus 451 ~v~~i~~-d~~g~lwigt~--~Gl~~~~~---~~~~~~~~~~~~~-----~---~~~~~~i~~i~~d~~g~lWigt~~~- 515 (781)
T 3v9f_A 451 DVRVFYE-DKNKKIWIGTH--AGVFVIDL---ASKKVIHHYDTSN-----S---QLLENFVRSIAQDSEGRFWIGTFGG- 515 (781)
T ss_dssp CEEEEEE-CTTSEEEEEET--TEEEEEES---SSSSCCEEECTTT-----S---SCSCSCEEEEEECTTCCEEEEESSS-
T ss_pred eEEEEEE-CCCCCEEEEEC--CceEEEeC---CCCeEEecccCcc-----c---ccccceeEEEEEcCCCCEEEEEcCC-
Confidence 4567777 47888998865 56888874 2344444332110 0 0112467889999999999997643
Q ss_pred EEEEEeCCC
Q 029556 126 VIRKITNLD 134 (191)
Q Consensus 126 rIr~i~~~~ 134 (191)
-|.++++.+
T Consensus 516 Gl~~~~~~~ 524 (781)
T 3v9f_A 516 GVGIYTPDM 524 (781)
T ss_dssp CEEEECTTC
T ss_pred CEEEEeCCC
Confidence 377788755
No 139
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.71 E-value=12 Score=34.11 Aligned_cols=75 Identities=8% Similarity=0.053 Sum_probs=49.1
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..+..++. |.+|+||++-.++ -+++++. .++++..+... ++- .-+....|+.|++|+||++-. +
T Consensus 495 ~~i~~i~~-d~~g~lWigt~~~-Gl~~~~~---~~~~~~~~~~~------~~l----~~~~i~~i~~d~~g~lWi~T~-~ 558 (781)
T 3v9f_A 495 NFVRSIAQ-DSEGRFWIGTFGG-GVGIYTP---DMQLVRKFNQY------EGF----CSNTINQIYRSSKGQMWLATG-E 558 (781)
T ss_dssp SCEEEEEE-CTTCCEEEEESSS-CEEEECT---TCCEEEEECTT------TTC----SCSCEEEEEECTTSCEEEEET-T
T ss_pred ceeEEEEE-cCCCCEEEEEcCC-CEEEEeC---CCCeEEEccCC------CCC----CCCeeEEEEECCCCCEEEEEC-C
Confidence 45678888 5899999997644 4788874 23455554321 110 112456899999999999975 3
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+-|.++++.+.
T Consensus 559 Glv~~~d~~~~ 569 (781)
T 3v9f_A 559 GLVCFPSARNF 569 (781)
T ss_dssp EEEEESCTTTC
T ss_pred CceEEECCCCC
Confidence 33388888654
No 140
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=83.50 E-value=14 Score=28.63 Aligned_cols=73 Identities=4% Similarity=-0.089 Sum_probs=44.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.....++++ ++++.+++-..++.|+.++. .+++........ ..+..+++.++|..+++-..+
T Consensus 184 ~~i~~~~~~-~~~~~l~~~~~dg~i~~~d~---~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 184 DGASCIDIS-NDGTKLWTGGLDNTVRSWDL---REGRQLQQHDFT--------------SQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSEEEEEET---TTTEEEEEEECS--------------SCEEEEEECTTSSEEEEEETT
T ss_pred CceEEEEEC-CCCCEEEEEecCCcEEEEEC---CCCceEeeecCC--------------CceEEEEECCCCCEEEEEcCC
Confidence 356888896 45555555556778888886 344433322110 134567777777766555556
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+.++..+.
T Consensus 246 ~~i~~~~~~~~ 256 (337)
T 1gxr_A 246 SNVEVLHVNKP 256 (337)
T ss_dssp SCEEEEETTSS
T ss_pred CcEEEEECCCC
Confidence 67777776543
No 141
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=82.41 E-value=21 Score=29.89 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=25.3
Q ss_pred CeeeEEEecCCCeEEEEeCC--CCeEEEEecCCCCCceEEEEe
Q 029556 46 NPHSVIDRPGSSDLIVLDSS--RSAFYTLSFPLSEESVVKRLA 86 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~--n~~I~~~d~~~~~~g~v~~~a 86 (191)
....++++|++..|+.+... +..|+.+++ .+|+...+.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~---~tg~~~~l~ 219 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTL---ANGAVRQVA 219 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEET---TTCCEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEEC---CCCcEEEee
Confidence 56889998666666655543 368999986 356655554
No 142
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=81.67 E-value=11 Score=34.57 Aligned_cols=88 Identities=9% Similarity=0.078 Sum_probs=51.6
Q ss_pred CcEEEEEEcCccC-CCCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceE
Q 029556 31 GYTVTTVIDGHQL-EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSF 109 (191)
Q Consensus 31 Gy~~~~~~~G~~~-~~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gI 109 (191)
.|..+.+-....+ -+.-..|+- |.+|.||++-. .-+.|+|- .+++.+--... +. ..-.-+.-..|
T Consensus 28 ~~~f~~~~~~~gLs~n~v~~I~q-D~~G~lWigT~--~GL~ryDG-----~~f~~~~~~~~----~~--~~l~~n~I~~i 93 (795)
T 4a2l_A 28 QITFSYISINEGLSQSTVFSIDQ-DKRGNMWFATY--DGVNKYDG-----YAFTVYQHNED----DP--NSIANDISRIV 93 (795)
T ss_dssp CCCCEEESGGGTCSSSCEEEEEE-CTTSCEEEEET--TEEEEECS-----SCEEEECCCTT----CT--TSCSCSCEEEE
T ss_pred ceeEEEccccCCCccceeEEEEE-cCCCCEEEeec--CcCcccCC-----CceEEEeCCCC----CC--CcccccceeEE
Confidence 3455554322222 245678888 58999999864 45888862 23455532110 00 00011345678
Q ss_pred EEcCCCCEEEEeCCCCEEEEEeCCC
Q 029556 110 AVDMKGNIYVADKSNHVIRKITNLD 134 (191)
Q Consensus 110 avD~~G~iyVaD~~n~rIr~i~~~~ 134 (191)
+.|++|.|||+-. ..+.++++..
T Consensus 94 ~~d~~g~lWigT~--~Gl~~yd~~~ 116 (795)
T 4a2l_A 94 KTDSQGRVWIGTR--DGLSRYDEEK 116 (795)
T ss_dssp EECTTSCEEEEES--SCEEEEETTT
T ss_pred EECCCCCEEEEeC--CchheeCCCC
Confidence 8999999999864 3478888754
No 143
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.26 E-value=14 Score=33.59 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=48.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....|+. |.+|+||++...++-+.+++. .++++..+... +. ..-..+..+..|++|+||++-. .
T Consensus 473 ~i~~i~~-d~~g~lWi~~~t~~Gl~~~d~---~~~~~~~~~~~-------~~---~~~~~~~~i~~d~~g~lWigt~--~ 536 (758)
T 3ott_A 473 FINQIIP-DNEGNVWVLLYNNKGIDKINP---RTREVTKLFAD-------EL---TGEKSPNYLLCDEDGLLWVGFH--G 536 (758)
T ss_dssp CEEEEEE-CTTSCEEEEETTCSSEEEEET---TTTEEEEECTT-------TS---CGGGCEEEEEECTTSCEEEEET--T
T ss_pred eeeeEEE-cCCCCEEEEccCCCCcEEEeC---CCCceEEecCC-------Cc---CCCcccceEEECCCCCEEEEec--C
Confidence 3567888 588999994333456899985 35666655311 10 0123577899999999999963 4
Q ss_pred EEEEEeCCCC
Q 029556 126 VIRKITNLDH 135 (191)
Q Consensus 126 rIr~i~~~~~ 135 (191)
-|.++++.+.
T Consensus 537 Gl~~~~~~~~ 546 (758)
T 3ott_A 537 GVMRINPKDE 546 (758)
T ss_dssp EEEEECC--C
T ss_pred ceEEEecCCC
Confidence 6999998654
No 144
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=80.93 E-value=8.5 Score=31.14 Aligned_cols=65 Identities=17% Similarity=0.207 Sum_probs=40.4
Q ss_pred eeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEE-----EEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-----RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 48 ~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~-----~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
..+.+ |++|.||.+ .+.+|+|++..- ++.-. ..+|+ .|+ ..=+-|++|++|+||-+.
T Consensus 91 ~a~~f-D~~G~LYav--~dG~iyr~~pP~--~~~~~Wl~~a~~vg~--~gw----------~~~~~lff~p~G~Lyav~- 152 (236)
T 1tl2_A 91 QFLFF-DPNGYLYAV--SKDKLYKASPPQ--SDTDNWIARATEVGS--GGW----------SGFKFLFFHPNGYLYAVH- 152 (236)
T ss_dssp SEEEE-CTTSCEEEE--ETTEEEEESCCC--STTCCHHHHSEEEEC--SSG----------GGEEEEEECTTSCEEEEE-
T ss_pred eEEEE-CCCCCEEEe--CCCEEEEeCCCc--CCCCceeccccEecc--CCC----------CceEEEEECCCceEEEEe-
Confidence 56778 599999988 448999997521 11111 11121 111 122789999999999888
Q ss_pred CCCEEEEEe
Q 029556 123 SNHVIRKIT 131 (191)
Q Consensus 123 ~n~rIr~i~ 131 (191)
+.++.|-.
T Consensus 153 -dg~lyr~~ 160 (236)
T 1tl2_A 153 -GQQFYKAL 160 (236)
T ss_dssp -TTEEEEEC
T ss_pred -CCcEEecC
Confidence 44565443
No 145
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.74 E-value=6.6 Score=35.85 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=42.8
Q ss_pred CCCeeeEEEecCCCeEEEEeC------------CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEE
Q 029556 44 EINPHSVIDRPGSSDLIVLDS------------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAV 111 (191)
Q Consensus 44 ~~~P~gIav~d~~g~lyVaD~------------~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIav 111 (191)
+.+|-+|+++ +.|+|||+.= .|+.++..+. ..|++..++-... | ...+|+++
T Consensus 475 f~~PDNL~fd-~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~---~~g~~~rf~~~P~-----g-------aE~TG~~f 538 (592)
T 3zwu_A 475 FNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADP---ATGEIRRFMVGPI-----G-------CEVTGISF 538 (592)
T ss_dssp CCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTTCSCEEEEECT---TTCCEEEEEECCT-----T-------CEEEEEEE
T ss_pred ccCCcceEEC-CCCCEEEEecCCCcccccccccccceEEEEeC---CCCeEEEEEeCCC-----C-------ccCcCeeE
Confidence 5799999995 7889998753 3467777763 3577777764321 1 14678999
Q ss_pred cCCC-CEEEE
Q 029556 112 DMKG-NIYVA 120 (191)
Q Consensus 112 D~~G-~iyVa 120 (191)
+++| .|||+
T Consensus 539 spDg~tlfvn 548 (592)
T 3zwu_A 539 SPDQKTLFVG 548 (592)
T ss_dssp CTTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 9986 47776
No 146
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=77.51 E-value=22 Score=27.36 Aligned_cols=73 Identities=10% Similarity=0.006 Sum_probs=47.4
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
..+..++++ ++++.+++-..++.|+.++. .++......+. -.....++++++|.+.++-..+
T Consensus 225 ~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~---~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 225 SQIFSLGYC-PTGEWLAVGMESSNVEVLHV---NKPDKYQLHLH--------------ESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSCEEEEET---TSSCEEEECCC--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred CceEEEEEC-CCCCEEEEEcCCCcEEEEEC---CCCCeEEEcCC--------------ccceeEEEECCCCCEEEEecCC
Confidence 356788886 45555555556677888875 23333332211 1246788999999877776678
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+.++...+
T Consensus 287 g~i~~~~~~~~ 297 (337)
T 1gxr_A 287 NLLNAWRTPYG 297 (337)
T ss_dssp SEEEEEETTTC
T ss_pred CcEEEEECCCC
Confidence 89999998664
No 147
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=76.18 E-value=11 Score=31.50 Aligned_cols=31 Identities=6% Similarity=0.139 Sum_probs=20.0
Q ss_pred CCceEEEcCCCC-EEEEeCCCC--EEEEEeCCCC
Q 029556 105 KPKSFAVDMKGN-IYVADKSNH--VIRKITNLDH 135 (191)
Q Consensus 105 ~P~gIavD~~G~-iyVaD~~n~--rIr~i~~~~~ 135 (191)
....+++.++|. |+++...++ .|+.++..++
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 456788888887 444433333 7888887654
No 148
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=75.88 E-value=26 Score=32.04 Aligned_cols=72 Identities=15% Similarity=0.249 Sum_probs=48.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....|+. |.+|+||++... -+++++. .++++..+... +|-+. +...+|+.|++|+||++- ++
T Consensus 544 ~i~~i~~-d~~g~lWigT~~--Gl~~~d~---~~~~~~~~~~~------~gl~~----~~i~~i~~d~~g~lWi~t--~~ 605 (795)
T 4a2l_A 544 FTNCIYE-ASNGIIWVGTRE--GFYCFNE---KDKQIKRYNTT------NGLPN----NVVYGILEDSFGRLWLST--NR 605 (795)
T ss_dssp CEEEEEE-CTTSCEEEEESS--CEEEEET---TTTEEEEECGG------GTCSC----SCEEEEEECTTSCEEEEE--TT
T ss_pred eeEEEEE-CCCCCEEEEeCC--CceeECC---CCCcEEEeCCC------CCCch----hheEEEEECCCCCEEEEc--CC
Confidence 4567888 488999998754 6888884 34556555211 12110 134679999999999986 46
Q ss_pred EEEEEeCCCC
Q 029556 126 VIRKITNLDH 135 (191)
Q Consensus 126 rIr~i~~~~~ 135 (191)
-|.++++.+.
T Consensus 606 Gl~~~~~~~~ 615 (795)
T 4a2l_A 606 GISCFNPETE 615 (795)
T ss_dssp EEEEEETTTT
T ss_pred ceEEEcCCCC
Confidence 7899998654
No 149
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=75.70 E-value=36 Score=28.87 Aligned_cols=71 Identities=10% Similarity=0.118 Sum_probs=46.0
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++.+.++-..++.|+..+. +|+ +..+.|.. .....+++.++|.+.++=...
T Consensus 469 ~v~~~~~s-pd~~~las~~~d~~i~iw~~----~~~~~~~~~~h~--------------~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 469 SVRGVAFS-PDGQTIASASDDKTVKLWNR----NGQLLQTLTGHS--------------SSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp CEEEEEEC-TTSCEEEEEETTSEEEEEET----TSCEEEEEECCS--------------SCEEEEEECTTSSCEEEEETT
T ss_pred CEEEEEEc-CCCCEEEEEeCCCEEEEEcC----CCCEEEEEeCCC--------------CCEEEEEEcCCCCEEEEEECc
Confidence 45788996 56666666667778888874 443 44443321 135678888888766655556
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+..+..+.
T Consensus 530 g~v~lwd~~~~ 540 (577)
T 2ymu_A 530 KTVKLWNRNGQ 540 (577)
T ss_dssp SEEEEECTTSC
T ss_pred CEEEEEeCCCC
Confidence 78888886543
No 150
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=73.88 E-value=33 Score=27.48 Aligned_cols=75 Identities=12% Similarity=-0.005 Sum_probs=46.6
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.....++++|.+++.+++-...+.|+..+.. +..+..+.+... . -.....+++.++|...++-..+
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~~--~---------~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFS---GSVIQVFAKTDS--W---------DYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETT---SCEEEEEECCCC--S---------SCCEEEEEEETTTTEEEEEETT
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECC---CCceEEEeccCC--C---------CCCeEEEEECCCCCEEEEECCC
Confidence 3557899975466777766777889998862 344555443211 0 0134567777777766655566
Q ss_pred CEEEEEeCC
Q 029556 125 HVIRKITNL 133 (191)
Q Consensus 125 ~rIr~i~~~ 133 (191)
+.|+.++..
T Consensus 185 ~~i~i~d~~ 193 (383)
T 3ei3_B 185 GRLLLLGLD 193 (383)
T ss_dssp SEEEEEETT
T ss_pred CCEEEEECC
Confidence 777777764
No 151
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=72.67 E-value=34 Score=27.85 Aligned_cols=70 Identities=11% Similarity=0.037 Sum_probs=47.4
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEE-EEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~-~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
-..++++ ++|.+.++=...+.|+.+|. .+++.. .+.. |+. ....++++.++|.+.++=+..+
T Consensus 272 V~~~~~S-pdg~~lasgs~D~~V~iwd~---~~~~~~~~~~~----gH~---------~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVD-MKGELAVLASNDNSIALVKL---KDLSMSKIFKQ----AHS---------FAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEEC-TTSCEEEEEETTSCEEEEET---TTTEEEEEETT----SSS---------SCEEEEEECTTSCEEEEEETTS
T ss_pred eEeEEEC-CCCCceEEEcCCCEEEEEEC---CCCcEEEEecC----ccc---------CCEEEEEECCCCCEEEEEeCCC
Confidence 4678886 56666665566678888885 355533 3321 111 1357899999999988877888
Q ss_pred EEEEEeCC
Q 029556 126 VIRKITNL 133 (191)
Q Consensus 126 rIr~i~~~ 133 (191)
.||.++..
T Consensus 335 tvrvw~ip 342 (365)
T 4h5i_A 335 TIHIIKLP 342 (365)
T ss_dssp EEEEEECC
T ss_pred eEEEEEcC
Confidence 99998854
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=70.66 E-value=26 Score=26.17 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=19.4
Q ss_pred CCceEEEcCCCC-EEEEe--CCCCEEEEEeCCC
Q 029556 105 KPKSFAVDMKGN-IYVAD--KSNHVIRKITNLD 134 (191)
Q Consensus 105 ~P~gIavD~~G~-iyVaD--~~n~rIr~i~~~~ 134 (191)
.+..++++++|. ++++- .+..+|..++..+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCC
Confidence 356788888886 55543 4456777777544
No 153
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=69.93 E-value=37 Score=26.43 Aligned_cols=77 Identities=14% Similarity=0.125 Sum_probs=50.1
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.....++++|.+++++++-..++.|+.++. .+++.......- .+. -.....++++++|+..++-..+
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~~-~~~---------~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKDHALRLWNI---QTDTLVAIFGGV-EGH---------RDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEET---TTTEEEEEECST-TSC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEEe---ecCeEEEEeccc-ccc---------cCceeEEEECCCCCEEEEecCC
Confidence 356889997536777766667788999986 345543333110 011 1246788999988877766667
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 183 g~i~i~d~~~ 192 (366)
T 3k26_A 183 HSLKLWRINS 192 (366)
T ss_dssp SCEEEEESCS
T ss_pred CCEEEEECCC
Confidence 8899998743
No 154
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=69.82 E-value=40 Score=26.80 Aligned_cols=70 Identities=10% Similarity=-0.064 Sum_probs=46.7
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEE-EEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~-~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++ .+++-...+.|+.++. .+++.. .+.+. -.....+++.++|+++++-..+
T Consensus 291 ~i~~~~~~-~~~-~l~~~~~d~~i~i~d~---~~~~~~~~~~~~--------------~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 291 SIVSASWV-GDD-KVISCSMDGSVRLWSL---KQNTLLALSIVD--------------GVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp CEEEEEEE-TTT-EEEEEETTSEEEEEET---TTTEEEEEEECT--------------TCCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEEC-CCC-EEEEEeCCCcEEEEEC---CCCcEeEecccC--------------CccEEEEEEcCCCCEEEEEECC
Confidence 45788896 455 6666667789999986 344433 33221 0145678899898877766677
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 352 g~i~i~~~~~ 361 (425)
T 1r5m_A 352 GQVNVYDLKK 361 (425)
T ss_dssp SCEEEEECHH
T ss_pred CeEEEEECCC
Confidence 8898888743
No 155
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=69.71 E-value=40 Score=26.97 Aligned_cols=72 Identities=8% Similarity=0.030 Sum_probs=48.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCC-CEEEEeCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVADKS 123 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G-~iyVaD~~ 123 (191)
....++++|.+++++++-..++.|+.++. .+++ +..+.+.. .....+++.++| .++++-..
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~---~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNP---ESAEQLSQFPARG--------------NWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECS---SSCCEEEEEECSS--------------SCCCCEEECTTCTTEEEECCS
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeC---CCCccceeecCCC--------------CceEEEEECCCCCCEEEEEec
Confidence 34778886536777766667788888875 2333 33333211 135678999988 78888777
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
.++|+..+...
T Consensus 327 d~~i~iw~~~~ 337 (416)
T 2pm9_A 327 DNKIEVQTLQN 337 (416)
T ss_dssp SSEEEEEESCC
T ss_pred CCcEEEEEccC
Confidence 88999888754
No 156
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=69.13 E-value=38 Score=26.30 Aligned_cols=73 Identities=16% Similarity=0.022 Sum_probs=45.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
.....++++ +++.++++-..++.|+.++. .+++ +..+.+.. .....++++++|+..++-..
T Consensus 33 ~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~---~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 33 RPLTQVKYN-KEGDLLFSCSKDSSASVWYS---LNGERLGTLDGHT--------------GTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp SCEEEEEEC-TTSCEEEEEESSSCEEEEET---TTCCEEEEECCCS--------------SCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEEEc-CCCCEEEEEeCCCEEEEEeC---CCchhhhhhhhcC--------------CcEEEEEEcCCCCEEEEEeC
Confidence 356889997 55665555556778888875 3443 33332211 13456788888776666556
Q ss_pred CCEEEEEeCCCC
Q 029556 124 NHVIRKITNLDH 135 (191)
Q Consensus 124 n~rIr~i~~~~~ 135 (191)
++.|+.++...+
T Consensus 95 dg~i~iwd~~~~ 106 (369)
T 3zwl_B 95 DYSIKLWDVSNG 106 (369)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEECCCC
Confidence 778888887543
No 157
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=67.83 E-value=48 Score=26.99 Aligned_cols=70 Identities=13% Similarity=0.091 Sum_probs=43.8
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEE-EecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKR-LAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~-~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
.+.++++ +++..+++-...+.|+..|. .+++... +.|.. .....+++.++|...++-...+
T Consensus 126 v~~v~~s-~dg~~l~s~~~d~~i~iwd~---~~~~~~~~~~~h~--------------~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 126 IRSVCFS-PDGKFLATGAEDRLIRIWDI---ENRKIVMILQGHE--------------QDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp EEEEEEC-TTSSEEEEEETTSCEEEEET---TTTEEEEEECCCS--------------SCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEC-CCCCEEEEEcCCCeEEEEEC---CCCcEEEEEccCC--------------CCEEEEEEcCCCCEEEEecCCC
Confidence 4578896 56666666667788888886 3454333 32211 1235677777777666666667
Q ss_pred EEEEEeCCC
Q 029556 126 VIRKITNLD 134 (191)
Q Consensus 126 rIr~i~~~~ 134 (191)
.|+..+...
T Consensus 188 ~v~iwd~~~ 196 (393)
T 1erj_A 188 TVRIWDLRT 196 (393)
T ss_dssp EEEEEETTT
T ss_pred cEEEEECCC
Confidence 777777644
No 158
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=66.49 E-value=47 Score=26.37 Aligned_cols=29 Identities=0% Similarity=-0.142 Sum_probs=20.5
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEec
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSF 74 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~ 74 (191)
.....++++ ++++++++-..++.|+.++.
T Consensus 331 ~~i~~~~~s-~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 331 VPIFAGRIS-QDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp CCEEEEEEC-TTSSEEEEEETTSCEEEEEC
T ss_pred ccEEEEEEc-CCCCEEEEEECCCeEEEEEC
Confidence 356888996 55666665566778888875
No 159
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=66.42 E-value=43 Score=27.78 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=45.0
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n 124 (191)
....++++|++..|+++-...+.|+.++...........+.+.. .-..+..++++++|. +++++ ..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~------------~~~~v~~~~~sp~~~~l~~~~-~~ 170 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC------------FSKRPNAISIAEDDTTVIIAD-KF 170 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE------------CSSCEEEEEECTTSSEEEEEE-TT
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc------------CCCCceEEEEcCCCCEEEEEe-CC
Confidence 46889997555555677667788888886311122344433210 002467888888876 44454 46
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++..+
T Consensus 171 g~v~~~~~~~ 180 (450)
T 2vdu_B 171 GDVYSIDINS 180 (450)
T ss_dssp SEEEEEETTS
T ss_pred CcEEEEecCC
Confidence 7788887643
No 160
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=65.78 E-value=25 Score=32.41 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=55.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCC---CceE----EEEecCCCccCCCCCCcccccCCCceEEEcCCCCE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE---ESVV----KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNI 117 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~---~g~v----~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~i 117 (191)
++|+|+-++|++..++++.....++..++.+.-. ++.+ ..+++....| -.|.-.++|.+|+.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-----------lGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-----------LGPLHTTFDGRGNA 391 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-----------SCEEEEEECSSSEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-----------CcccEEEECCCCce
Confidence 6899999998888999999999999998863100 0110 1111211111 26888999999999
Q ss_pred EEEeCCCCEEEEEeC
Q 029556 118 YVADKSNHVIRKITN 132 (191)
Q Consensus 118 yVaD~~n~rIr~i~~ 132 (191)
|.+=.-...|.|.+.
T Consensus 392 YTtlfidSqvvkWni 406 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNM 406 (638)
T ss_dssp EEEETTTTEEEEEEH
T ss_pred EeeeeecceEEEEec
Confidence 999888888988776
No 161
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=64.73 E-value=51 Score=26.14 Aligned_cols=71 Identities=11% Similarity=0.072 Sum_probs=44.4
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ ++++..++-...+.|+.++. .++. ...+.+.+ .....+++.++|...++-..+
T Consensus 124 ~~~~~~~s-pdg~~l~~g~~dg~v~i~~~---~~~~~~~~~~~~~--------------~~v~~~~~spdg~~lasg~~d 185 (321)
T 3ow8_A 124 DAWTLAFS-PDSQYLATGTHVGKVNIFGV---ESGKKEYSLDTRG--------------KFILSIAYSPDGKYLASGAID 185 (321)
T ss_dssp CCCCEEEC-TTSSEEEEECTTSEEEEEET---TTCSEEEEEECSS--------------SCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEEC-CCCCEEEEEcCCCcEEEEEc---CCCceeEEecCCC--------------ceEEEEEECCCCCEEEEEcCC
Confidence 45678886 66677777777888888876 2333 22222211 124567788887766665566
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 186 g~i~iwd~~~ 195 (321)
T 3ow8_A 186 GIINIFDIAT 195 (321)
T ss_dssp SCEEEEETTT
T ss_pred CeEEEEECCC
Confidence 7777777654
No 162
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=64.08 E-value=56 Score=26.96 Aligned_cols=75 Identities=4% Similarity=-0.052 Sum_probs=48.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-ceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~ 123 (191)
..+.++++|.+++++++....+.|+.++.+.... ..+..+.+. -..+..+++.++|. ++++-..
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~--------------~~~v~~i~~~p~~~~~l~tg~~ 298 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH--------------TAEVNCLSFNPYSEFILATGSA 298 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC--------------SSCEEEEEECSSCTTEEEEEET
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC--------------CCCeEEEEeCCCCCCEEEEEeC
Confidence 4688999765888999988999999998632110 112222111 11366788888765 6766666
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
++.|+.++...
T Consensus 299 dg~v~vwd~~~ 309 (430)
T 2xyi_A 299 DKTVALWDLRN 309 (430)
T ss_dssp TSEEEEEETTC
T ss_pred CCeEEEEeCCC
Confidence 77888888743
No 163
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=64.08 E-value=66 Score=27.20 Aligned_cols=70 Identities=10% Similarity=0.108 Sum_probs=42.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++...++-..++.|+..+. +++ +..+.+.. .....++++++|.+.++=..+
T Consensus 428 ~v~~~~~s-~d~~~l~~~~~d~~v~~w~~----~~~~~~~~~~~~--------------~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 428 SVWGVAFS-PDDQTIASASDDKTVKLWNR----NGQLLQTLTGHS--------------SSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSEEEEEET----TSCEEEEEECCS--------------SCEEEEEECTTSCEEEEEETT
T ss_pred CeEEEEEC-CCCCEEEEEcCCCEEEEEEC----CCCEEEEEcCCC--------------CCEEEEEEcCCCCEEEEEeCC
Confidence 45778886 45555555556678888774 333 33333221 134567888888766665566
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+..+..+
T Consensus 489 ~~i~iw~~~~ 498 (577)
T 2ymu_A 489 KTVKLWNRNG 498 (577)
T ss_dssp SEEEEEETTS
T ss_pred CEEEEEcCCC
Confidence 7777777644
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=63.95 E-value=34 Score=29.95 Aligned_cols=73 Identities=12% Similarity=0.107 Sum_probs=41.5
Q ss_pred eeeEEEecCCCeEEEEeCC-------CCeEEEEecCCCCCc---eEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSS-------RSAFYTLSFPLSEES---VVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN 116 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~-------n~~I~~~d~~~~~~g---~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~ 116 (191)
...++++|++..|+++... ...|+.++.+ .+| ....+.... -..+..+++.++|.
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~--~~g~~~~~~~l~~~~-------------~~~~~~~~~spdg~ 254 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT--EDGRFADTRTLLGGP-------------EEAIAQAEWAPDGS 254 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC--TTSCEEEEEEEEEET-------------TBCEEEEEECTTSC
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC--CCCcccccEEeCCCC-------------CceEcceEECCCCe
Confidence 3567787666667655432 2578888862 135 444443210 01345677777777
Q ss_pred EEEEeCCCC--EEEEEeCCC
Q 029556 117 IYVADKSNH--VIRKITNLD 134 (191)
Q Consensus 117 iyVaD~~n~--rIr~i~~~~ 134 (191)
+|++-..++ +|.+++.++
T Consensus 255 l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp EEEEECTTSSCEEEEECTTT
T ss_pred EEEEECCCCCeEEEEEECCC
Confidence 665543333 788887644
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=63.73 E-value=42 Score=26.76 Aligned_cols=76 Identities=16% Similarity=0.045 Sum_probs=34.5
Q ss_pred eEEEecCCCeE-EEEeCCCC---eEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEE--e
Q 029556 49 SVIDRPGSSDL-IVLDSSRS---AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVA--D 121 (191)
Q Consensus 49 gIav~d~~g~l-yVaD~~n~---~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVa--D 121 (191)
.++++|++..| |+++.... .|+.+++ .+|+.+.+..... .......|.++++.++|. |+++ |
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~---~~g~~~~l~~~~~--------~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADP---ETLENRQLTSMPA--------CSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECT---TTCCEEEEEEECC--------EEEEEECTTSSEEEEEECCC------
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEec---CCCceEEEEcCCC--------ceeeeecCCCCeEccCCCcceeEeee
Confidence 45676555445 45554332 3777775 3454443322110 000111244555555553 3332 1
Q ss_pred ------CCCCEEEEEeCCCC
Q 029556 122 ------KSNHVIRKITNLDH 135 (191)
Q Consensus 122 ------~~n~rIr~i~~~~~ 135 (191)
.++..|+.++.+++
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 311 DSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp ------CCCCEEEEEETTTT
T ss_pred ccccccCCCCEEEEEeccCC
Confidence 44567777777654
No 166
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=62.55 E-value=34 Score=27.75 Aligned_cols=29 Identities=17% Similarity=0.253 Sum_probs=20.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEec
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSF 74 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~ 74 (191)
.+..++++|.+++++++-..++.|+.+|.
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 45677786667777777667778888875
No 167
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=62.27 E-value=61 Score=27.55 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=52.4
Q ss_pred CCeEEEEeCCCC--eEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCc-eEEEcCCCCEEEEeCCCCEEEEEeC
Q 029556 56 SSDLIVLDSSRS--AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPK-SFAVDMKGNIYVADKSNHVIRKITN 132 (191)
Q Consensus 56 ~g~lyVaD~~n~--~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~-gIavD~~G~iyVaD~~n~rIr~i~~ 132 (191)
..-||.-+...+ .|..+|+ .++++.--.--...|. +| ...+. ++-+-....||+.+....+|..++.
T Consensus 39 k~yL~~~N~~~~~~~i~~iDL---~~~kl~k~i~~ekEGP-Ng------i~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~ 108 (369)
T 3s9j_A 39 KEYLHFENTQKSLYDIVIFDI---ENQQIAKRIPLHKTGP-NG------LPAVFGSRPSPDSQYILVAQNNISRLSSINS 108 (369)
T ss_dssp EEEEEEEECSTTCCEEEEEET---TTTEEEEEEECBSSST-TB------CTTCCCEEESSSTTSEEEEEGGGTEEEEECT
T ss_pred cEEEEEeCCCCCcCcEEEEEC---CCCceeeeeccccCCC-CC------cccceeeEEecCCCEEEEEeCCcceEEEECC
Confidence 336777888888 9999998 4566443332222221 11 22364 4666667889999988889999998
Q ss_pred CCCCceEEEEeccCCCc
Q 029556 133 LDHGNQLIRQINLKPED 149 (191)
Q Consensus 133 ~~~~~~~i~~i~~~~~~ 149 (191)
.+ +.++.+.+....
T Consensus 109 ~G---~~~~k~~~~~~~ 122 (369)
T 3s9j_A 109 QG---EIIRNYNFQTPE 122 (369)
T ss_dssp TC---CEEEEEECCCTT
T ss_pred Cc---eEEEEEecCCCc
Confidence 77 466666655433
No 168
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=59.70 E-value=27 Score=28.32 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=20.2
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEec
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSF 74 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~ 74 (191)
.+..++++|.++.++++-..++.|+.++.
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNI 256 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEES
T ss_pred cccchhhhhcccceEEEeecccceeEEEC
Confidence 35778887666677666556677888875
No 169
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=58.32 E-value=57 Score=25.75 Aligned_cols=84 Identities=7% Similarity=0.008 Sum_probs=42.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-ceEEE--EecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKR--LAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-g~v~~--~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVa 120 (191)
.....++++|.++++.++-..++.|+.++.+-... ..... ....+. ...+ ..-.....+++.+ +++++++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGR-DHPD-----VHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECT-TCTT-----CCSSCEEEEEECTTCTTCEEE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccc-cccc-----cCCCcEEEEEEccCCCcEEEE
Confidence 35688999742666666666677888888631110 01110 000000 0000 1112345667766 4555555
Q ss_pred eCCCCEEEEEeCCC
Q 029556 121 DKSNHVIRKITNLD 134 (191)
Q Consensus 121 D~~n~rIr~i~~~~ 134 (191)
-..++.|+..+...
T Consensus 118 ~~~d~~i~iwd~~~ 131 (408)
T 4a11_B 118 SSFDKTLKVWDTNT 131 (408)
T ss_dssp EETTSEEEEEETTT
T ss_pred EeCCCeEEEeeCCC
Confidence 44556777777654
No 170
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=58.30 E-value=53 Score=27.71 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=46.3
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEE-EEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~-~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++|.+++++++-..++.|+..|. .++... ...+. -.....++++++|...++=..+
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~---~~~~~~~~~~~~--------------~~~v~~v~wspdg~~lasgs~d 213 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQV---TETVKVCATLPS--------------TVAVTSVCWSPKGKQLAVGKQN 213 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEE---SSSEEEEEEECG--------------GGCEEEEEECTTSSCEEEEETT
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEc---CCCcceeeccCC--------------CCceeEEEEcCCCCEEEEEcCC
Confidence 46889997555788877777888999886 233221 11110 1146778888888755544466
Q ss_pred CEEEEEeCC
Q 029556 125 HVIRKITNL 133 (191)
Q Consensus 125 ~rIr~i~~~ 133 (191)
+.|+.++..
T Consensus 214 g~v~iwd~~ 222 (434)
T 2oit_A 214 GTVVQYLPT 222 (434)
T ss_dssp SCEEEECTT
T ss_pred CcEEEEccC
Confidence 778888875
No 171
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=57.51 E-value=75 Score=25.68 Aligned_cols=79 Identities=13% Similarity=0.022 Sum_probs=50.9
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++..+++-+..+.|+..|+ .++. +..+...... ..........+++.++|.+.++-..+
T Consensus 251 ~v~~v~~~-p~~~~l~s~s~D~~i~lwd~---~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 251 DINSVKFF-PDGQRFGTGSDDGTCRLFDM---RTGHQLQVYNREPDR-------NDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp CCCEEEEC-TTSSEEEEECSSSCEEEEET---TTTEEEEEECCCCSS-------SCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CeEEEEEe-cCCCeEEEEcCCCeEEEEEC---CCCcEEEEecccccc-------cccccCceEEEEECCCCCEEEEEECC
Confidence 34678885 56677777777788888876 3444 3333221100 01122235789999999988888888
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+..+....
T Consensus 320 g~i~vwd~~~~ 330 (380)
T 3iz6_a 320 GDCYVWDTLLA 330 (380)
T ss_dssp SCEEEEETTTC
T ss_pred CCEEEEECCCC
Confidence 99999987543
No 172
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=56.98 E-value=69 Score=26.39 Aligned_cols=76 Identities=8% Similarity=0.078 Sum_probs=48.3
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-----------ceEEEEecCCCccCCCCCCcccccCCCceEEEcCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-----------SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK 114 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-----------g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~ 114 (191)
....++++|.+..++++-...++|+.+++..... ....... .+.-..+..++++++
T Consensus 323 ~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~~p~ 389 (430)
T 2xyi_A 323 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-------------GGHTAKISDFSWNPN 389 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC-------------CCCSSCEEEEEECSS
T ss_pred CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEc-------------CCCCCCceEEEECCC
Confidence 4578888755557787777788888888632100 0111110 011225788999999
Q ss_pred CC-EEEEeCCCCEEEEEeCCC
Q 029556 115 GN-IYVADKSNHVIRKITNLD 134 (191)
Q Consensus 115 G~-iyVaD~~n~rIr~i~~~~ 134 (191)
+. ++++-...+.|+.++...
T Consensus 390 ~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 390 EPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp STTEEEEEETTSEEEEEEECH
T ss_pred CCCEEEEEECCCCEEEeEccc
Confidence 88 777777778888888743
No 173
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=56.34 E-value=1.1e+02 Score=27.08 Aligned_cols=84 Identities=10% Similarity=0.038 Sum_probs=45.3
Q ss_pred CCeeeEEEecCCCeEEEEeCCCC-----eEEEEecCCCCCceEEEEec-CCCccCCCCCC-------c--cccc---CCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRS-----AFYTLSFPLSEESVVKRLAG-DGVQGYSDGEP-------G--SARF---DKP 106 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~-----~I~~~d~~~~~~g~v~~~aG-~~~~G~~DG~~-------~--~a~f---~~P 106 (191)
..+..++++|++..|+.+....+ .|+.++. .+|+...... .... .+|.. . ..++ ...
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~---~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDI---GSGQTRLLVDSKVVL--PGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEET---TTCCEEEEECGGGTC----------------------CCEES
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEEC---CCCceeEccchhhcc--cccccccchhhhhhhhhhhccccCc
Confidence 46889999866666777665233 8999886 3455444432 1100 01000 0 0000 124
Q ss_pred ceEEEcCCCC-EEEEeCCCCEEEEEeCCCC
Q 029556 107 KSFAVDMKGN-IYVADKSNHVIRKITNLDH 135 (191)
Q Consensus 107 ~gIavD~~G~-iyVaD~~n~rIr~i~~~~~ 135 (191)
..+++.++|. |+++.. +.|+.++..++
T Consensus 112 ~~~~~SpDg~~l~~~~~--~~i~~~d~~~~ 139 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG--GELYLYDLKQE 139 (741)
T ss_dssp CCCEECTTSSEEEEEET--TEEEEEESSSC
T ss_pred ceeEECCCCCEEEEEeC--CcEEEEECCCC
Confidence 6778888876 445443 67777776554
No 174
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=56.02 E-value=24 Score=30.51 Aligned_cols=78 Identities=15% Similarity=0.080 Sum_probs=43.4
Q ss_pred CeeeEEEecCCCeEEEEeCCC-CeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSR-SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n-~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++|++..|+.++..+ .+|++++. .+|+.....+.. +......-..|...+++++|.++++-..+
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAREARLVTVDP---RDGSVEDLELPS------KDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSSCEEEEEECT---TTCCEEECCCSC------SHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred ccccceECCCCCEEEEccCCCeeEEEEEcC---CCCcEEEccCCC------cChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 347889986666777665443 47888875 345555222110 10000000112344488888888776666
Q ss_pred CEEEEEeC
Q 029556 125 HVIRKITN 132 (191)
Q Consensus 125 ~rIr~i~~ 132 (191)
++++.++.
T Consensus 267 g~~~l~~~ 274 (582)
T 3o4h_A 267 GRSAVFID 274 (582)
T ss_dssp TEEEEEET
T ss_pred CcEEEEEE
Confidence 67776665
No 175
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=55.17 E-value=73 Score=24.84 Aligned_cols=71 Identities=8% Similarity=-0.082 Sum_probs=43.5
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCc---eEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES---VVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g---~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
....++++ ++++++++-..++.|+.++. .++ .+..+.+.. .....+++.++|++.++-.
T Consensus 10 ~i~~~~~s-~~~~~l~~~~~d~~v~i~~~---~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 10 PISCHAWN-KDRTQIAICPNNHEVHIYEK---SGNKWVQVHELKEHN--------------GQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp CCCEEEEC-TTSSEEEEECSSSEEEEEEE---ETTEEEEEEEEECCS--------------SCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEEC-CCCCEEEEEeCCCEEEEEeC---CCCcEEeeeeecCCC--------------CcccEEEEeCCCCEEEEEc
Confidence 45788996 56666666667788998886 244 333333221 1345677777777655544
Q ss_pred CCCEEEEEeCCC
Q 029556 123 SNHVIRKITNLD 134 (191)
Q Consensus 123 ~n~rIr~i~~~~ 134 (191)
.++.|+.++.+.
T Consensus 72 ~dg~i~vwd~~~ 83 (372)
T 1k8k_C 72 TDRNAYVWTLKG 83 (372)
T ss_dssp TTSCEEEEEEET
T ss_pred CCCeEEEEECCC
Confidence 556677666543
No 176
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=54.59 E-value=77 Score=24.95 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=47.9
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCC-CCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSD-GEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~D-G~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++|.+..++++-..++.|+.++.... ......+.......... -......-.....++++++|+..++-..+
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRA-SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCS-SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCC-CcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 45788897555556666667778888886311 11222221110000000 00001122346678999998866666567
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 267 g~i~vwd~~~ 276 (408)
T 4a11_B 267 NRMRLWNSSN 276 (408)
T ss_dssp SCEEEEETTT
T ss_pred CeEEEEECCC
Confidence 7899888754
No 177
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=54.24 E-value=36 Score=26.36 Aligned_cols=73 Identities=10% Similarity=-0.048 Sum_probs=42.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce----EEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEE
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV----VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYV 119 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~----v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyV 119 (191)
.....++++| +++..++-...+.|+.++.+ ++. .....+.. .....+++.++|+ ..+
T Consensus 12 ~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~---~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~l~ 73 (342)
T 1yfq_A 12 DYISDIKIIP-SKSLLLITSWDGSLTVYKFD---IQAKNVDLLQSLRYK--------------HPLLCCNFIDNTDLQIY 73 (342)
T ss_dssp SCEEEEEEEG-GGTEEEEEETTSEEEEEEEE---TTTTEEEEEEEEECS--------------SCEEEEEEEESSSEEEE
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCeEEEEEeC---CCCccccceeeeecC--------------CceEEEEECCCCCcEEE
Confidence 3567889975 44544444566788888753 222 33332211 1345677877777 444
Q ss_pred EeCCCCEEEEEeC-CCC
Q 029556 120 ADKSNHVIRKITN-LDH 135 (191)
Q Consensus 120 aD~~n~rIr~i~~-~~~ 135 (191)
+-..++.|+.++. ..+
T Consensus 74 ~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSP 90 (342)
T ss_dssp EEETTSCEEEECSSSSS
T ss_pred EEcCCCeEEEEEeccCC
Confidence 4445677888877 554
No 178
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=53.72 E-value=86 Score=25.25 Aligned_cols=76 Identities=11% Similarity=0.053 Sum_probs=44.6
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.....++++|.+.+++++-...+.|+..|. .+++....... .+. -.....+++.++|+.+++-..+
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~--~~~---------~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDV---GTGAAVLTLGP--DVH---------PDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEET---TTTEEEEEECT--TTC---------CSCEEEEEECTTSSCEEEEETT
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEEC---CCCCccEEEec--CCC---------CCceEEEEECCCCCEEEEEecC
Confidence 345788996444467766667778998886 34543333210 000 0134567777777655554456
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 198 ~~i~iwd~~~ 207 (402)
T 2aq5_A 198 KRVRVIEPRK 207 (402)
T ss_dssp SEEEEEETTT
T ss_pred CcEEEEeCCC
Confidence 7777777644
No 179
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=52.92 E-value=94 Score=25.46 Aligned_cols=68 Identities=9% Similarity=0.114 Sum_probs=43.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
...+++++ +++...++-...+.|+..+. .+++ +..+.+.. ....++++.+++.+.++=...
T Consensus 340 ~v~~v~~~-~~g~~l~s~s~D~~i~vwd~---~~~~~~~~~~~h~--------------~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 340 WVRGVLFH-SGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHE--------------HFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp CEEEEEEC-SSSSCEEEEETTTEEEEECC---TTSCCCEEEECCS--------------SCEEEEEECSSSSCEEEEETT
T ss_pred cEEEEEEc-CCCCEEEEEeCCCeEEEEEC---CCCceEEEEcCCC--------------CcEEEEEEcCCCCEEEEEeCC
Confidence 45788896 56666666667778888875 2332 33333211 135678888888877776667
Q ss_pred CEEEEEe
Q 029556 125 HVIRKIT 131 (191)
Q Consensus 125 ~rIr~i~ 131 (191)
+.|+..+
T Consensus 402 ~~i~vW~ 408 (410)
T 1vyh_C 402 QTVKVWE 408 (410)
T ss_dssp SEEEEEC
T ss_pred CcEEEEe
Confidence 7787665
No 180
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=52.63 E-value=89 Score=25.09 Aligned_cols=70 Identities=16% Similarity=-0.014 Sum_probs=44.4
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD~~n 124 (191)
.-..++++|+++.+.++=...+.|+..|. .++++....+- . ..-.++++.+ +|.++++=...
T Consensus 271 ~v~~l~~sp~~~~~lasgs~D~~i~iwd~---~~~~~~~~~~H-----~---------~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 271 NITGLAYSYHSSPFLASISEDCTVAVLDA---DFSEVFRDLSH-----R---------DFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECT---TSCEEEEECCC-----S---------SCEEEEEECSSSTTEEEEEETT
T ss_pred eEEEEEEcCCCCCEEEEEeCCCEEEEEEC---CCCcEeEECCC-----C---------CCEEEEEEeCCCCCEEEEEcCC
Confidence 34788887555566665566778888875 34554443321 1 1245788886 67777765566
Q ss_pred CEEEEEeC
Q 029556 125 HVIRKITN 132 (191)
Q Consensus 125 ~rIr~i~~ 132 (191)
+.|+..+.
T Consensus 334 g~v~iW~~ 341 (357)
T 4g56_B 334 HKVLHHHL 341 (357)
T ss_dssp SCEEEEEC
T ss_pred CeEEEEEC
Confidence 77887775
No 181
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=52.47 E-value=85 Score=24.82 Aligned_cols=86 Identities=9% Similarity=-0.099 Sum_probs=48.9
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCC-ccC----CCCCC--cccccCCCceEEEcCCC-
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGV-QGY----SDGEP--GSARFDKPKSFAVDMKG- 115 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~-~G~----~DG~~--~~a~f~~P~gIavD~~G- 115 (191)
.....++++ +++..+++-..++.|+.++. .+++ +..+..... .+. ..|.. ....-.....+++.++|
T Consensus 292 ~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 292 SWVMSLSFN-DSGETLCSAGWDGKLRFWDV---KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SCEEEEEEC-SSSSEEEEEETTSEEEEEET---TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred CcEEEEEEC-CCCCEEEEEeCCCeEEEEEc---CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 356789996 56666666667889999986 3444 344431000 010 00000 00002346788999987
Q ss_pred ---------CEEEEeCCCCEEEEEeCCC
Q 029556 116 ---------NIYVADKSNHVIRKITNLD 134 (191)
Q Consensus 116 ---------~iyVaD~~n~rIr~i~~~~ 134 (191)
+++++-..++.|+.++.++
T Consensus 368 ~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 368 RSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp SBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccccceEEEecCCCcEEEEEcCC
Confidence 6666666678888877543
No 182
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=51.44 E-value=94 Score=25.01 Aligned_cols=75 Identities=13% Similarity=0.057 Sum_probs=47.4
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe---C
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD---K 122 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD---~ 122 (191)
....++++ ++++.+++-...+.|+.+|+ .+++.......+ . .+ ..+..+++.++|.++++- .
T Consensus 178 ~v~~~~~~-~~~~~l~~~~~d~~i~iwd~---~~~~~~~~~~~~---~-~~-------~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 178 TIYSVDWS-RDGALICTSCRDKRVRVIEP---RKGTVVAEKDRP---H-EG-------TRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp CEEEEEEC-TTSSCEEEEETTSEEEEEET---TTTEEEEEEECS---S-CS-------SSCCEEEECSTTEEEEEEECTT
T ss_pred ceEEEEEC-CCCCEEEEEecCCcEEEEeC---CCCceeeeeccC---C-CC-------CcceEEEEcCCCcEEEEeccCC
Confidence 56889996 45665555556788999986 345433322110 0 01 135678888888877765 5
Q ss_pred CCCEEEEEeCCCC
Q 029556 123 SNHVIRKITNLDH 135 (191)
Q Consensus 123 ~n~rIr~i~~~~~ 135 (191)
.++.|+.++....
T Consensus 243 ~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 243 SERQVALWDTKHL 255 (402)
T ss_dssp CCEEEEEEETTBC
T ss_pred CCceEEEEcCccc
Confidence 6788888887553
No 183
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=50.34 E-value=96 Score=24.81 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=49.4
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCe-EEEEecCCCCCce-EEEEe-cCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSA-FYTLSFPLSEESV-VKRLA-GDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~-I~~~d~~~~~~g~-v~~~a-G~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
.....++++ +++.+.++-...+. |+..|. .+++ +..+. |. + -.....++++++|...++-
T Consensus 196 ~~v~~~~~s-~~g~~l~s~s~d~~~v~iwd~---~~~~~~~~~~~g~----h---------~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 196 NPIKMVRLN-RKSDMVATCSQDGTIIRVFKT---EDGVLVREFRRGL----D---------RADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTCSEEEEEET---TTCCEEEEEECTT----C---------CSCEEEEEECTTSCEEEEE
T ss_pred CceEEEEEC-CCCCEEEEEeCCCCEEEEEEC---CCCcEEEEEEcCC----C---------CCcEEEEEECCCCCEEEEE
Confidence 345889996 56777776667776 888886 3444 33333 21 0 0135678999999988877
Q ss_pred CCCCEEEEEeCCC
Q 029556 122 KSNHVIRKITNLD 134 (191)
Q Consensus 122 ~~n~rIr~i~~~~ 134 (191)
...+.|+..+...
T Consensus 259 s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 259 SDKWTLHVFEIFN 271 (355)
T ss_dssp ETTCEEEEEESSC
T ss_pred ECCCEEEEEEccC
Confidence 7778999998754
No 184
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=50.09 E-value=86 Score=24.17 Aligned_cols=75 Identities=5% Similarity=-0.006 Sum_probs=46.2
Q ss_pred CCeeeEEEecCC--CeEEEEeCCCCeEEEEecCCCCCce-E-EEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEE
Q 029556 45 INPHSVIDRPGS--SDLIVLDSSRSAFYTLSFPLSEESV-V-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA 120 (191)
Q Consensus 45 ~~P~gIav~d~~--g~lyVaD~~n~~I~~~d~~~~~~g~-v-~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVa 120 (191)
..-..++++|++ |+..++-..++.|+.++.+ .++. + ..+.+.. .....+++.++|...++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQ--DSGQTIPKAQQMHT--------------GPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEEC--TTSCEEEEEEEECS--------------SCEEEEEECTTSSEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcC--CCCceeEEEecccc--------------CCEEEEEECcCCCEEEE
Confidence 345889997544 6777776777889888863 2133 2 3333221 13456777777775555
Q ss_pred eCCCCEEEEEeCCCC
Q 029556 121 DKSNHVIRKITNLDH 135 (191)
Q Consensus 121 D~~n~rIr~i~~~~~ 135 (191)
=..++.|+..+....
T Consensus 104 ~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSN 118 (368)
T ss_dssp EETTSEEEEEETTTT
T ss_pred EcCCCcEEEEEcCCC
Confidence 555677887777554
No 185
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=49.77 E-value=98 Score=24.74 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=16.7
Q ss_pred CCCEEEEeCCCCEEEEEeCCCC
Q 029556 114 KGNIYVADKSNHVIRKITNLDH 135 (191)
Q Consensus 114 ~G~iyVaD~~n~rIr~i~~~~~ 135 (191)
+|.+|+++. ++.|..+++.++
T Consensus 318 ~~~l~v~~~-~g~l~~~d~~tG 338 (376)
T 3q7m_A 318 NGNLVVGDS-EGYLHWINVEDG 338 (376)
T ss_dssp TTEEEEECT-TSEEEEEETTTC
T ss_pred CCEEEEEeC-CCeEEEEECCCC
Confidence 478999875 578999998765
No 186
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=49.54 E-value=92 Score=24.38 Aligned_cols=70 Identities=11% Similarity=0.106 Sum_probs=42.5
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.-..++++ +++...++-...+.|+..|. .+++ +..+.|.. + ....++++++|.+.++-...
T Consensus 67 ~v~~~~~s-~dg~~l~s~s~D~~v~~wd~---~~~~~~~~~~~h~------~--------~v~~~~~~~~~~~l~s~s~D 128 (319)
T 3frx_A 67 IVQDCTLT-ADGAYALSASWDKTLRLWDV---ATGETYQRFVGHK------S--------DVMSVDIDKKASMIISGSRD 128 (319)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSEEEEEET---TTTEEEEEEECCS------S--------CEEEEEECTTSCEEEEEETT
T ss_pred cEEEEEEC-CCCCEEEEEeCCCEEEEEEC---CCCCeeEEEccCC------C--------cEEEEEEcCCCCEEEEEeCC
Confidence 34678886 66676666677789999986 3454 34444321 1 23456666666666655555
Q ss_pred CEEEEEeCC
Q 029556 125 HVIRKITNL 133 (191)
Q Consensus 125 ~rIr~i~~~ 133 (191)
+.|+..+..
T Consensus 129 ~~i~vwd~~ 137 (319)
T 3frx_A 129 KTIKVWTIK 137 (319)
T ss_dssp SCEEEEETT
T ss_pred CeEEEEECC
Confidence 666666654
No 187
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=49.27 E-value=96 Score=24.49 Aligned_cols=75 Identities=7% Similarity=-0.002 Sum_probs=49.2
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....++++ ++++.+++-...+.|+.+|+ .++......... + .......+++.++|.+.++-..++
T Consensus 228 ~v~~v~~~-p~~~~l~s~s~d~~v~iwd~---~~~~~~~~~~~~------~-----~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 228 DINAICFF-PNGNAFATGSDDATCRLFDL---RADQELMTYSHD------N-----IICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEET---TTTEEEEEECCT------T-----CCSCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEc-CCCCEEEEEcCCCcEEEEEC---CCCcEEEEEccC------C-----cccceEEEEECCCCCEEEEECCCC
Confidence 46788996 56677777677788998886 233322221110 0 111346788999999888877788
Q ss_pred EEEEEeCCCC
Q 029556 126 VIRKITNLDH 135 (191)
Q Consensus 126 rIr~i~~~~~ 135 (191)
.|+..+....
T Consensus 293 ~i~vwd~~~~ 302 (340)
T 1got_B 293 NCNVWDALKA 302 (340)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEEcccC
Confidence 9999987543
No 188
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=49.22 E-value=1e+02 Score=24.85 Aligned_cols=73 Identities=8% Similarity=0.001 Sum_probs=47.9
Q ss_pred CeeeEEEecCCCeEEEEeC--CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEE--e
Q 029556 46 NPHSVIDRPGSSDLIVLDS--SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA--D 121 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~--~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVa--D 121 (191)
....++++|.+..++++-. .++.|+.++. .+++.......+ .....+++.++|...++ -
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~---~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~g 323 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNA---ATGARVNTVDAG--------------SQVTSLIWSPHSKEIMSTHG 323 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEET---TTCCEEEEEECS--------------SCEEEEEECSSSSEEEEEEC
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEEC---CCCCEEEEEeCC--------------CcEEEEEECCCCCeEEEEee
Confidence 4588999766777877754 6789999986 344433222111 13567888888876665 4
Q ss_pred CCCCEEEEEeCCCC
Q 029556 122 KSNHVIRKITNLDH 135 (191)
Q Consensus 122 ~~n~rIr~i~~~~~ 135 (191)
..++.|+.++....
T Consensus 324 ~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 324 FPDNNLSIWSYSSS 337 (401)
T ss_dssp TTTCEEEEEEEETT
T ss_pred cCCCcEEEEecCCc
Confidence 46788888887553
No 189
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=48.86 E-value=78 Score=23.36 Aligned_cols=72 Identities=13% Similarity=0.159 Sum_probs=38.9
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-ceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeC-
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK- 122 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~- 122 (191)
....++++|++..++++. ++.|+.++. .+ ++...+... .. -..+..+++.++|. ++++..
T Consensus 43 ~v~~~~~spdg~~l~~~~--~~~i~~~d~---~~~~~~~~~~~~----~~--------~~~~~~~~~spdg~~l~~~~~~ 105 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS--EGLLYRLSL---AGDPSPEKVDTG----FA--------TICNNDHGISPDGALYAISDKV 105 (297)
T ss_dssp CCEEEEECTTSSEEEEEE--TTEEEEEES---SSCCSCEECCCT----TC--------CCBCSCCEECTTSSEEEEEECT
T ss_pred ceEeeEECCCCCEEEEEc--CCeEEEEeC---CCCCCceEeccc----cc--------cccccceEECCCCCEEEEEEeC
Confidence 678999975444455543 668999886 23 433332210 00 01345667777765 333331
Q ss_pred --CCCEEEEEeCCC
Q 029556 123 --SNHVIRKITNLD 134 (191)
Q Consensus 123 --~n~rIr~i~~~~ 134 (191)
+..+|..++..+
T Consensus 106 ~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 106 EFGKSAIYLLPSTG 119 (297)
T ss_dssp TTSSCEEEEEETTC
T ss_pred CCCcceEEEEECCC
Confidence 246777776644
No 190
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=48.73 E-value=1e+02 Score=26.99 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=35.4
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC-----ceEEEEecCCCccCCCCC-CcccccCCCceEEEcCCCC-EE
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-----SVVKRLAGDGVQGYSDGE-PGSARFDKPKSFAVDMKGN-IY 118 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~-----g~v~~~aG~~~~G~~DG~-~~~a~f~~P~gIavD~~G~-iy 118 (191)
.+..++++|++..|.++ .++.|+..+.+ + |+...+...+......|. ..+..+..+.++++.++|. |+
T Consensus 122 ~~~~~~~SpdG~~la~~--~~~~i~v~~~~---~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYV--RNHNLYIARGG---KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp CCTTCEECTTSSEEEEE--ETTEEEEEECB---CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred cccCCcCCCCCCEEEEE--ECCeEEEEecC---cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 46778887555556554 45788888752 3 433322211110000011 1122345578888888876 44
Q ss_pred EE
Q 029556 119 VA 120 (191)
Q Consensus 119 Va 120 (191)
++
T Consensus 197 ~~ 198 (706)
T 2z3z_A 197 FY 198 (706)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 191
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=47.71 E-value=1.3e+02 Score=26.55 Aligned_cols=70 Identities=11% Similarity=0.167 Sum_probs=36.4
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCC---cccccCCCceEEEcCCCC-EEEE
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEP---GSARFDKPKSFAVDMKGN-IYVA 120 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~---~~a~f~~P~gIavD~~G~-iyVa 120 (191)
.+..++++|++..|.++. ++.|+.++. .+++...+...+......|.. .+..+..+.++++.++|. |+++
T Consensus 153 ~~~~~~~SPDG~~la~~~--~~~i~~~d~---~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~ 226 (741)
T 2ecf_A 153 FATDAKLSPKGGFVSFIR--GRNLWVIDL---ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYA 226 (741)
T ss_dssp CEEEEEECTTSSEEEEEE--TTEEEEEET---TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEE
T ss_pred ccccccCCCCCCEEEEEe--CCcEEEEec---CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEE
Confidence 467888986555565554 347888875 345544432211100000000 011244567888988876 6555
No 192
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=45.81 E-value=1.5e+02 Score=25.87 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=18.0
Q ss_pred EEEecCCCeEEEEeCCCC----eEEEEec
Q 029556 50 VIDRPGSSDLIVLDSSRS----AFYTLSF 74 (191)
Q Consensus 50 Iav~d~~g~lyVaD~~n~----~I~~~d~ 74 (191)
++++|++..||++-..++ +|++++.
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 688766667887766654 7888875
No 193
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=45.11 E-value=1e+02 Score=23.67 Aligned_cols=72 Identities=6% Similarity=-0.061 Sum_probs=43.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEE--cCCCCEEEEeC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAV--DMKGNIYVADK 122 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIav--D~~G~iyVaD~ 122 (191)
.....++++ ++++.+++-..++.|+..+. .++......+.. .....+++ +++|+++++-.
T Consensus 87 ~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~---~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 87 GPVLDVCWS-DDGSKVFTASCDKTAKMWDL---SSNQAIQIAQHD--------------APVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSEEEEEET---TTTEEEEEEECS--------------SCEEEEEEEECSSCEEEEEEE
T ss_pred CCEEEEEEC-cCCCEEEEEcCCCcEEEEEc---CCCCceeecccc--------------CceEEEEEEeCCCCCEEEEcc
Confidence 356889996 45655555566778999886 345544443321 12455666 66676555555
Q ss_pred CCCEEEEEeCCC
Q 029556 123 SNHVIRKITNLD 134 (191)
Q Consensus 123 ~n~rIr~i~~~~ 134 (191)
.++.|+.++...
T Consensus 149 ~dg~i~vwd~~~ 160 (368)
T 3mmy_A 149 WDKTLKFWDTRS 160 (368)
T ss_dssp TTSEEEEECSSC
T ss_pred CCCcEEEEECCC
Confidence 566777777643
No 194
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=44.83 E-value=1.4e+02 Score=25.11 Aligned_cols=77 Identities=9% Similarity=0.009 Sum_probs=46.5
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....++++|++++.+++-..++.|+.++. .+++..........+. -.....+++. +|..+++-..++
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~---~~~~~~~~~~~~~~~~---------~~~v~~~~~~-~~~~l~~~~~d~ 274 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDG---KSGEFLKYIEDDQEPV---------QGGIFALSWL-DSQKFATVGADA 274 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEET---TTCCEEEECCBTTBCC---------CSCEEEEEES-SSSEEEEEETTS
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEEC---CCCCEeEEeccccccc---------CCceEEEEEc-CCCEEEEEcCCC
Confidence 46789997442666666666788999886 3454333321100001 1135678888 777766666678
Q ss_pred EEEEEeCCCC
Q 029556 126 VIRKITNLDH 135 (191)
Q Consensus 126 rIr~i~~~~~ 135 (191)
.|+.++....
T Consensus 275 ~i~~wd~~~~ 284 (615)
T 1pgu_A 275 TIRVWDVTTS 284 (615)
T ss_dssp EEEEEETTTT
T ss_pred cEEEEECCCC
Confidence 8888887643
No 195
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=43.41 E-value=1.7e+02 Score=27.52 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=45.1
Q ss_pred CeeeEEEecCCCeEEEE-e----CCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEE
Q 029556 46 NPHSVIDRPGSSDLIVL-D----SSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA 120 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVa-D----~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVa 120 (191)
....++++|++..|..+ . .++..|+..+. ..|....+.+... ....+.....++++.++|.++++
T Consensus 54 ~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~---~~g~~~~lt~~~~-------~~~~~~~~~~~~~~SpDg~ll~~ 123 (1045)
T 1k32_A 54 VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG---ENGEIKRITYFSG-------KSTGRRMFTDVAGFDPDGNLIIS 123 (1045)
T ss_dssp EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET---TTTEEEECCCCCE-------EEETTEECSEEEEECTTCCEEEE
T ss_pred cccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC---CCCCeEEcccCCC-------cccccccccccccCCCCCEEEEE
Confidence 45778898655556544 2 24557888875 3455544432210 00112233467888888875554
Q ss_pred eC------CCCEEEEEeCCCC
Q 029556 121 DK------SNHVIRKITNLDH 135 (191)
Q Consensus 121 D~------~n~rIr~i~~~~~ 135 (191)
-. ...+|+.++..++
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~g 144 (1045)
T 1k32_A 124 TDAMQPFSSMTCLYRVENDGI 144 (1045)
T ss_dssp ECTTSSSTTCCEEEEEEGGGT
T ss_pred ECCcCCCcccceEEEEECCCC
Confidence 33 3357888887553
No 196
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=42.69 E-value=1.3e+02 Score=24.03 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=44.9
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
.....++++ +++++.++-..++.|+.++++ +++ +..+.+.. .....+++.++|...++-..
T Consensus 140 ~~v~~~~~~-~~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~s~~~ 201 (420)
T 3vl1_A 140 SEITKLKFF-PSGEALISSSQDMQLKIWSVK---DGSNPRTLIGHR--------------ATVTDIAIIDRGRNVLSASL 201 (420)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSEEEEEETT---TCCCCEEEECCS--------------SCEEEEEEETTTTEEEEEET
T ss_pred CccEEEEEC-CCCCEEEEEeCCCeEEEEeCC---CCcCceEEcCCC--------------CcEEEEEEcCCCCEEEEEcC
Confidence 356888996 556666665677788888862 332 33332211 13456788888776666556
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
.+.|+..+...
T Consensus 202 d~~v~iwd~~~ 212 (420)
T 3vl1_A 202 DGTIRLWECGT 212 (420)
T ss_dssp TSCEEEEETTT
T ss_pred CCcEEEeECCC
Confidence 67788888754
No 197
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=42.41 E-value=1.1e+02 Score=23.32 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=44.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCC--ce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE--SV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~--g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
..-+.|+++|.++++.++=...+.|+..++..... +. ...+.| +. .....+++.++|++.++-
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-----h~---------~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-----HS---------HFVSDVVISSDGQFALSG 104 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-----CS---------SCEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-----CC---------CCEEEEEECCCCCEEEEE
Confidence 35688999766678887766777788777532111 11 112211 11 134567777777766655
Q ss_pred CCCCEEEEEeCCC
Q 029556 122 KSNHVIRKITNLD 134 (191)
Q Consensus 122 ~~n~rIr~i~~~~ 134 (191)
...+.|+..+...
T Consensus 105 ~~d~~i~~~~~~~ 117 (340)
T 4aow_A 105 SWDGTLRLWDLTT 117 (340)
T ss_dssp ETTSEEEEEETTT
T ss_pred cccccceEEeecc
Confidence 5566777766643
No 198
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=42.38 E-value=1.7e+02 Score=25.40 Aligned_cols=77 Identities=9% Similarity=-0.011 Sum_probs=50.7
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCC---ccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGV---QGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~---~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
....++++ +++.++++-...+.|+..+. .+++......... .++ -....++++.++|...++=.
T Consensus 192 ~V~~v~fs-pdg~~las~s~D~~i~lwd~---~~g~~~~~~~~~~~~~~~h---------~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 192 FVHSVRYN-PDGSLFASTGGDGTIVLYNG---VDGTKTGVFEDDSLKNVAH---------SGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEET---TTCCEEEECBCTTSSSCSS---------SSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEC-CCCCEEEEEECCCcEEEEEC---CCCcEeeeecccccccccc---------CCCEEEEEECCCCCEEEEEe
Confidence 46789996 66777777777888888885 3454332221100 011 12456889999998777766
Q ss_pred CCCEEEEEeCCCC
Q 029556 123 SNHVIRKITNLDH 135 (191)
Q Consensus 123 ~n~rIr~i~~~~~ 135 (191)
..+.|+..+....
T Consensus 259 ~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 259 ADKTIKIWNVATL 271 (611)
T ss_dssp TTSEEEEEETTTT
T ss_pred CCCeEEEEeCCCC
Confidence 7788999987643
No 199
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=41.79 E-value=1e+02 Score=23.74 Aligned_cols=30 Identities=7% Similarity=0.048 Sum_probs=20.6
Q ss_pred CCeeeEEEecCCCeEEEEeCC---CCeEEEEec
Q 029556 45 INPHSVIDRPGSSDLIVLDSS---RSAFYTLSF 74 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~---n~~I~~~d~ 74 (191)
.....++++|++..+.++-.. ++.|+.++.
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~ 51 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEI 51 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEE
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeC
Confidence 356889997555566666544 778888876
No 200
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=41.18 E-value=1.3e+02 Score=23.69 Aligned_cols=92 Identities=12% Similarity=0.015 Sum_probs=51.7
Q ss_pred CeeeEEEecCCCeEEEEeCCC---CeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 46 NPHSVIDRPGSSDLIVLDSSR---SAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n---~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
....++++ +++.++++-..+ +.|+.++. .+++ +..+.+...+... -....+.-.....++++++|.++++-
T Consensus 235 ~i~~i~~~-~~~~~l~~~~~d~~~g~i~i~d~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 235 SIRSVKFS-PQGSLLAIAHDSNSFGCITLYET---EFGERIGSLSVPTHSSQA-SLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CEEEEEEC-SSTTEEEEEEEETTEEEEEEEET---TTCCEEEEECBC---------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccceEEEC-CCCCEEEEEecCCCCceEEEEEC---CCCcccceeccCcccccc-cccccccCCcEEEEEECCCCCEEEEE
Confidence 56889996 455555544455 78999886 2343 3443331000000 00000011245688999888877777
Q ss_pred CCCCEEEEEeCCCCCceEEEEec
Q 029556 122 KSNHVIRKITNLDHGNQLIRQIN 144 (191)
Q Consensus 122 ~~n~rIr~i~~~~~~~~~i~~i~ 144 (191)
..++.|+.++.... +.+..+.
T Consensus 310 ~~dg~i~iwd~~~~--~~~~~~~ 330 (397)
T 1sq9_A 310 GWDGKLRFWDVKTK--ERITTLN 330 (397)
T ss_dssp ETTSEEEEEETTTT--EEEEEEE
T ss_pred eCCCeEEEEEcCCC--ceeEEEe
Confidence 67889999998654 4444444
No 201
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=40.67 E-value=1.1e+02 Score=26.58 Aligned_cols=29 Identities=17% Similarity=0.159 Sum_probs=21.7
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCC
Q 029556 105 KPKSFAVDMKGNIYVADKSNHVIRKITNL 133 (191)
Q Consensus 105 ~P~gIavD~~G~iyVaD~~n~rIr~i~~~ 133 (191)
....+++.++|...++-..++.|+..+..
T Consensus 493 ~v~~v~fspdg~~las~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 493 EITSVAFSNNGAFLVATDQSRKVIPYSVA 521 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEGG
T ss_pred ceEEEEECCCCCEEEEEcCCCCEEEEEcC
Confidence 35678999998877766667778877764
No 202
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=40.05 E-value=1.3e+02 Score=23.28 Aligned_cols=68 Identities=10% Similarity=0.078 Sum_probs=40.2
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
-..++++ ++++..++-...+.|+..+. .+++ +..+.+.. ..-..+++.+++.+.++=...+
T Consensus 58 v~~~~~~-~~~~~l~s~s~d~~i~vwd~---~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~sgs~D~ 119 (304)
T 2ynn_A 58 VRAGKFI-ARKNWIIVGSDDFRIRVFNY---NTGEKVVDFEAHP--------------DYIRSIAVHPTKPYVLSGSDDL 119 (304)
T ss_dssp EEEEEEE-GGGTEEEEEETTSEEEEEET---TTCCEEEEEECCS--------------SCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEEEe-CCCCEEEEECCCCEEEEEEC---CCCcEEEEEeCCC--------------CcEEEEEEcCCCCEEEEECCCC
Confidence 3677886 45566666667788998886 3443 33333221 1234667777766665555556
Q ss_pred EEEEEeC
Q 029556 126 VIRKITN 132 (191)
Q Consensus 126 rIr~i~~ 132 (191)
.|+..+.
T Consensus 120 ~v~lWd~ 126 (304)
T 2ynn_A 120 TVKLWNW 126 (304)
T ss_dssp CEEEEEG
T ss_pred eEEEEEC
Confidence 6666665
No 203
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=39.23 E-value=1.3e+02 Score=23.25 Aligned_cols=73 Identities=12% Similarity=-0.026 Sum_probs=39.4
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.....++++| +++.+++-..++.|+.++. .+++.....-.. +. -.....+++.++|+.+++-..+
T Consensus 53 ~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~---~~~~~~~~~~~~--~~---------~~~v~~~~~~~~~~~l~~~~~d 117 (372)
T 1k8k_C 53 GQVTGVDWAP-DSNRIVTCGTDRNAYVWTL---KGRTWKPTLVIL--RI---------NRAARCVRWAPNEKKFAVGSGS 117 (372)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEEE---ETTEEEEEEECC--CC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred CcccEEEEeC-CCCEEEEEcCCCeEEEEEC---CCCeeeeeEEee--cC---------CCceeEEEECCCCCEEEEEeCC
Confidence 3568899974 5555555556678888875 244422221110 00 0135567777777655544445
Q ss_pred CEEEEEeC
Q 029556 125 HVIRKITN 132 (191)
Q Consensus 125 ~rIr~i~~ 132 (191)
+.|+.++.
T Consensus 118 ~~v~i~d~ 125 (372)
T 1k8k_C 118 RVISICYF 125 (372)
T ss_dssp SSEEEEEE
T ss_pred CEEEEEEe
Confidence 55665554
No 204
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=39.19 E-value=1.9e+02 Score=25.02 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=41.7
Q ss_pred CeeeEEEecCCCeEEEEeCCCC--eEEEEecCCCCCceEEEEecCCCccCCCCCCcccccC-CCceEEEcCCCCEEEEe-
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRS--AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFD-KPKSFAVDMKGNIYVAD- 121 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~--~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~-~P~gIavD~~G~iyVaD- 121 (191)
.+..++++ ++|.+|++-..++ +|++++. .+++...+..... .. + ...+. ....+++.++|.++++-
T Consensus 243 ~~~~~~~s-pdg~l~~~~~~~~~~~l~~~~~---~~~~~~~l~~~~~-~~--~---~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 243 AIAQAEWA-PDGSLIVATDRTGWWNLHRVDP---ATGAATQLCRREE-EF--A---GPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp CEEEEEEC-TTSCEEEEECTTSSCEEEEECT---TTCCEEESSCCSS-BS--S---CCCCSTTCCSEEECTTSCEEEEEB
T ss_pred eEcceEEC-CCCeEEEEECCCCCeEEEEEEC---CCCceeecccccc-cc--c---CccccccCceEeEeCCCEEEEEEE
Confidence 57788897 4455665544444 7888874 2455444332110 00 0 00010 12457777677765542
Q ss_pred CCCCEEEEEeCCCC
Q 029556 122 KSNHVIRKITNLDH 135 (191)
Q Consensus 122 ~~n~rIr~i~~~~~ 135 (191)
.+..+|..++.+++
T Consensus 313 ~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 313 KGAAVLGILDPESG 326 (662)
T ss_dssp SSSCEEEEEETTTT
T ss_pred cCccEEEEEECCCC
Confidence 24556777776543
No 205
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=39.15 E-value=1.7e+02 Score=24.53 Aligned_cols=75 Identities=11% Similarity=0.059 Sum_probs=47.2
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC----------C
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM----------K 114 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~----------~ 114 (191)
.....++++ +++...++-..++.|+.++. .+++..... .+. .-.....+++.+ +
T Consensus 489 ~~v~~~~~s-~~g~~l~~~~~dg~i~iw~~---~~~~~~~~~----~~~--------h~~~v~~~~~sp~~~~~~~~~~~ 552 (615)
T 1pgu_A 489 AKPSYISIS-PSETYIAAGDVMGKILLYDL---QSREVKTSR----WAF--------RTSKINAISWKPAEKGANEEEIE 552 (615)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSCEEEEET---TTTEEEECC----SCC--------CSSCEEEEEECCCC------CCS
T ss_pred CceEEEEEC-CCCCEEEEcCCCCeEEEeeC---CCCcceeEe----ecC--------CCCceeEEEEcCccccccccccC
Confidence 456889996 55666655556778888886 344432211 110 112456788887 8
Q ss_pred CCEEEEeCCCCEEEEEeCCCC
Q 029556 115 GNIYVADKSNHVIRKITNLDH 135 (191)
Q Consensus 115 G~iyVaD~~n~rIr~i~~~~~ 135 (191)
|.+.++-..++.|+..+....
T Consensus 553 ~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 553 EDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CCEEEEEETTSCEEEEESSCT
T ss_pred CCEEEEEcCCCcEEEEECCCC
Confidence 887776666778988888653
No 206
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=38.78 E-value=1.6e+02 Score=24.07 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=41.2
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEeCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKS 123 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD~~ 123 (191)
.-+.++++|.++++.++=..++.|+..|.+ .+. ...+-. .|+. + .-.+|++.+ ++++.++=..
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~---~~~~~~~~~~---~gH~-~--------~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFG---IKDKPTFIKG---IGAG-G--------SITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSS---CCSCCEEECC---CSSS-C--------CCCEEEECSSCTTEEEEECS
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECC---CCCceeEEEc---cCCC-C--------CEEEEEEeCCCCCEEEEEeC
Confidence 356789976677776665566778888752 222 111111 1111 1 235667764 4666666555
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
.+.|+..+.++
T Consensus 186 D~~v~iwd~~~ 196 (435)
T 4e54_B 186 EGTTRLQDFKG 196 (435)
T ss_dssp SSCEEEEETTS
T ss_pred CCEEEEeeccC
Confidence 66677777644
No 207
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=38.63 E-value=1.3e+02 Score=23.04 Aligned_cols=70 Identities=13% Similarity=-0.054 Sum_probs=45.3
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC-
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN- 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n- 124 (191)
....++++ ++++.+++-..++.|+.++. .+++........ ..+..+++.++|..+++-..+
T Consensus 76 ~v~~~~~~-~~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~~~~ 137 (369)
T 3zwl_B 76 TIWSIDVD-CFTKYCVTGSADYSIKLWDV---SNGQCVATWKSP--------------VPVKRVEFSPCGNYFLAILDNV 137 (369)
T ss_dssp CEEEEEEC-TTSSEEEEEETTTEEEEEET---TTCCEEEEEECS--------------SCEEEEEECTTSSEEEEEECCB
T ss_pred cEEEEEEc-CCCCEEEEEeCCCeEEEEEC---CCCcEEEEeecC--------------CCeEEEEEccCCCEEEEecCCc
Confidence 45788996 55666666566788999886 344433222110 135678899888877665555
Q ss_pred ----CEEEEEeCC
Q 029556 125 ----HVIRKITNL 133 (191)
Q Consensus 125 ----~rIr~i~~~ 133 (191)
+.|+.++..
T Consensus 138 ~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 138 MKNPGSINIYEIE 150 (369)
T ss_dssp TTBCCEEEEEEEE
T ss_pred cCCCCEEEEEEec
Confidence 788888764
No 208
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=37.60 E-value=1.5e+02 Score=23.35 Aligned_cols=69 Identities=10% Similarity=0.149 Sum_probs=35.0
Q ss_pred EEEecCCCeEEEE-e-CCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCCCE
Q 029556 50 VIDRPGSSDLIVL-D-SSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNHV 126 (191)
Q Consensus 50 Iav~d~~g~lyVa-D-~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n~r 126 (191)
.+++|++..|+++ + .++.+|+.++. .+|+...+.... +. ...+.++.++|. |+++.. +..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~---~~g~~~~lt~~~------~~-------~~~~~~~spdg~~l~~~~~-~~~ 103 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDL---NTQVATQLTEGR------GD-------NTFGGFLSPDDDALFYVKD-GRN 103 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEET---TTCEEEECCCSS------CB-------CSSSCEECTTSSEEEEEET-TTE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeC---CCCceEEeeeCC------CC-------CccceEEcCCCCEEEEEeC-CCe
Confidence 5687555555544 3 34457888885 345554433110 00 011345666654 444442 356
Q ss_pred EEEEeCCCC
Q 029556 127 IRKITNLDH 135 (191)
Q Consensus 127 Ir~i~~~~~ 135 (191)
|+.++.+++
T Consensus 104 l~~~d~~~g 112 (388)
T 3pe7_A 104 LMRVDLATL 112 (388)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 666666554
No 209
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=37.47 E-value=1.4e+02 Score=22.87 Aligned_cols=71 Identities=15% Similarity=0.139 Sum_probs=39.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ ++++.+++-..++.|+.+|. .+++ +..+.+.. .....++++++|.++++-...
T Consensus 109 ~v~~~~~~-~~~~~l~s~~~d~~i~iwd~---~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 109 YVFCCNFN-PQSNLIVSGSFDESVRIWDV---KTGKCLKTLPAHS--------------DPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp CEEEEEEC-SSSSEEEEEETTSCEEEEET---TTCCEEEEECCCS--------------SCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEc-CCCCEEEEEeCCCcEEEEEC---CCCEEEEEecCCC--------------CcEEEEEEcCCCCEEEEEeCC
Confidence 34667785 55666666666778888875 2333 22322110 123456677777655554455
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 171 ~~i~~wd~~~ 180 (312)
T 4ery_A 171 GLCRIWDTAS 180 (312)
T ss_dssp SCEEEEETTT
T ss_pred CcEEEEECCC
Confidence 6677666543
No 210
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=37.21 E-value=1.6e+02 Score=23.49 Aligned_cols=67 Identities=16% Similarity=0.175 Sum_probs=39.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++.+.++-...+.|+.+|. .++. +..+.|.. .....+++.++|...++=...
T Consensus 286 ~~~~~~~s-~~g~~l~~g~~d~~i~vwd~---~~~~~~~~l~~h~--------------~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 286 GASSVDFS-LSGRLLFAGYNDYTINVWDV---LKGSRVSILFGHE--------------NRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEET---TTCSEEEEECCCS--------------SCEEEEEECTTSSCEEEEETT
T ss_pred ceeEEEEe-CCCCEEEEEECCCcEEEEEC---CCCceEEEEECCC--------------CcEEEEEECCCCCEEEEEcCC
Confidence 34677785 55666655556677888875 2333 33332211 134578888888766655556
Q ss_pred CEEEEE
Q 029556 125 HVIRKI 130 (191)
Q Consensus 125 ~rIr~i 130 (191)
+.|+..
T Consensus 348 ~~v~vW 353 (354)
T 2pbi_B 348 HTLRVW 353 (354)
T ss_dssp SEEEEE
T ss_pred CCEEec
Confidence 667654
No 211
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=35.46 E-value=1.6e+02 Score=23.17 Aligned_cols=71 Identities=7% Similarity=0.006 Sum_probs=45.3
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCC-EEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~-iyVaD~~n 124 (191)
....++++ +++..+++-..++.|+.++. ....+..+.+.. .....+++.++|. ++++-..+
T Consensus 165 ~v~~~~~~-~~~~~l~~~~~d~~i~i~d~---~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 165 WYCCVDVS-VSRQMLATGDSTGRLLLLGL---DGHEIFKEKLHK--------------AKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp CEEEEEEE-TTTTEEEEEETTSEEEEEET---TSCEEEEEECSS--------------SCEEEEEECSSCTTEEEEEETT
T ss_pred CeEEEEEC-CCCCEEEEECCCCCEEEEEC---CCCEEEEeccCC--------------CcEEEEEECCCCCCEEEEEeCC
Confidence 46788887 45555555566778888885 222344433211 1356788888887 66666667
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+.++...
T Consensus 227 ~~i~iwd~~~ 236 (383)
T 3ei3_B 227 ATVKLWDLRN 236 (383)
T ss_dssp SEEEEEEGGG
T ss_pred CEEEEEeCCC
Confidence 7888888753
No 212
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=35.42 E-value=2.3e+02 Score=24.89 Aligned_cols=32 Identities=13% Similarity=0.259 Sum_probs=19.7
Q ss_pred cCCCCEEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 112 DMKGNIYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 112 D~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
...|.+|++. .++.|+.+|..++ +.+-++.++
T Consensus 473 t~gg~v~~g~-~dg~l~a~D~~tG--~~lw~~~~~ 504 (571)
T 2ad6_A 473 TKGGLVWYAT-LDGYLKALDNKDG--KELWNFKMP 504 (571)
T ss_dssp ETTTEEEEEC-TTSEEEEEETTTC--CEEEEEECS
T ss_pred ECCCEEEEEc-CCCeEEEEECCCC--CEEEEEeCC
Confidence 3456788864 4578888987654 334444433
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=34.54 E-value=2.6e+02 Score=25.20 Aligned_cols=36 Identities=0% Similarity=-0.080 Sum_probs=22.6
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 108 SFAVDMKGNIYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 108 gIavD~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
+......|.+|++ +.++.++.+|.+++ +.+-+..++
T Consensus 480 g~~~tagglvf~g-t~dg~l~a~D~~tG--~~lw~~~~~ 515 (689)
T 1yiq_A 480 GTLSTAGNLVFEG-SADGRVIAYAADTG--EKLWEQPAA 515 (689)
T ss_dssp CEEEETTTEEEEE-CTTSEEEEEETTTC--CEEEEEECS
T ss_pred ccceECCCEEEEE-CCCCcEEEEECCCC--ccceeeeCC
Confidence 3344445667777 45788999998765 445455544
No 214
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=34.37 E-value=1.6e+02 Score=22.76 Aligned_cols=37 Identities=14% Similarity=0.213 Sum_probs=21.0
Q ss_pred CeeeEEEecCCCeEEEEeC----CCCeEEEEecCCCCCceEEEE
Q 029556 46 NPHSVIDRPGSSDLIVLDS----SRSAFYTLSFPLSEESVVKRL 85 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~----~n~~I~~~d~~~~~~g~v~~~ 85 (191)
....++++|++..|+++.. +..+|+.++. ..|+...+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~---~~g~~~~l 100 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADL---ETLSSKKI 100 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEET---TTTEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEEC---CCCceEEE
Confidence 4567888766656654432 3345777775 24554443
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=33.75 E-value=2.6e+02 Score=25.07 Aligned_cols=31 Identities=0% Similarity=-0.013 Sum_probs=20.1
Q ss_pred CCCCEEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 113 MKGNIYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 113 ~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
..|.+|++ ...+.++.+|..++ +.+..+.++
T Consensus 487 ~g~~v~~g-~~dg~l~a~D~~tG--~~lw~~~~~ 517 (677)
T 1kb0_A 487 AGNVVFQG-TADGRLVAYHAATG--EKLWEAPTG 517 (677)
T ss_dssp TTTEEEEE-CTTSEEEEEETTTC--CEEEEEECS
T ss_pred CCCEEEEE-CCCCcEEEEECCCC--ceeeeeeCC
Confidence 34567777 46788999988654 445555544
No 216
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=33.72 E-value=1.7e+02 Score=22.92 Aligned_cols=71 Identities=11% Similarity=0.119 Sum_probs=48.0
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++.++++-...+.|+..|. .++. ...+.+.. .....+++.++|+.+++-...
T Consensus 186 ~v~~~~~~-~~~~~l~sg~~d~~v~~wd~---~~~~~~~~~~~h~--------------~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 186 DVMSLSLA-PDTRLFVSGACDASAKLWDV---REGMCRQTFTGHE--------------SDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEET---TTCSEEEEECCCS--------------SCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEEC-CCCCEEEEEeCCCcEEEEEC---CCCeeEEEEcCCc--------------CCEEEEEEcCCCCEEEEEcCC
Confidence 45788885 56777777777888888885 2343 33332211 135678888888877777777
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+..+...
T Consensus 248 ~~v~iwd~~~ 257 (340)
T 1got_B 248 ATCRLFDLRA 257 (340)
T ss_dssp SCEEEEETTT
T ss_pred CcEEEEECCC
Confidence 8888888754
No 217
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=33.36 E-value=1.7e+02 Score=22.87 Aligned_cols=72 Identities=14% Similarity=0.076 Sum_probs=47.5
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ +++.++++-...+.|+.++. .++. ...+.|. -.....+++.++|...++-...
T Consensus 208 ~v~~l~~s-pd~~~l~s~s~dg~i~iwd~---~~~~~~~~~~~h--------------~~~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 208 PIRSLTFS-PDSQLLVTASDDGYIKIYDV---QHANLAGTLSGH--------------ASWVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp CCCEEEEC-TTSCEEEEECTTSCEEEEET---TTCCEEEEECCC--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEEc-CCCCEEEEEcCCCeEEEEEC---CCcceeEEEcCC--------------CCceEEEEECCCCCEEEEEeCC
Confidence 34789996 56666676677788888886 2333 3333221 0134678888888877776677
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+..+...+
T Consensus 270 ~~v~iwd~~~~ 280 (321)
T 3ow8_A 270 KSVKVWDVGTR 280 (321)
T ss_dssp SCEEEEETTTT
T ss_pred CcEEEEeCCCC
Confidence 88888887543
No 218
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=33.20 E-value=1.8e+02 Score=27.34 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=23.8
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEe
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLA 86 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~a 86 (191)
..+..++++|++..|+++. ..+.|+.++. .+|+...+.
T Consensus 379 ~~~~~~~~SpDG~~la~~~-~~~~v~~~d~---~tg~~~~~~ 416 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAN-DRFEIMTVDL---ETGKPTVIE 416 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEE-TTSEEEEEET---TTCCEEEEE
T ss_pred cceeeeEECCCCCEEEEEC-CCCeEEEEEC---CCCceEEec
Confidence 3567888975555555554 4568888886 356555444
No 219
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=33.13 E-value=1.6e+02 Score=22.43 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=41.5
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ ++++..++-..++.|+.++. .+++ +..+-+.. .....+++.+++++.++-..+
T Consensus 67 ~v~~~~~~-~~~~~l~s~~~d~~i~vwd~---~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 67 GISDVAWS-SDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHS--------------NYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSEEEEEET---TTCCEEEEEECCS--------------SCEEEEEECSSSSEEEEEETT
T ss_pred ceEEEEEc-CCCCEEEEECCCCEEEEEEC---CCCcEEEEEcCCC--------------CCEEEEEEcCCCCEEEEEeCC
Confidence 45788996 56666666667788988886 2343 33333221 022455666666655555555
Q ss_pred CEEEEEeCC
Q 029556 125 HVIRKITNL 133 (191)
Q Consensus 125 ~rIr~i~~~ 133 (191)
+.|+..+..
T Consensus 129 ~~i~iwd~~ 137 (312)
T 4ery_A 129 ESVRIWDVK 137 (312)
T ss_dssp SCEEEEETT
T ss_pred CcEEEEECC
Confidence 666666654
No 220
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=32.80 E-value=1.7e+02 Score=22.88 Aligned_cols=70 Identities=11% Similarity=-0.000 Sum_probs=37.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce----EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEe
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV----VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~----v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD 121 (191)
....++++ ++++.+++-...+.|+.++.+ .+. ...+.+. .-.....+++.++|.+.++-
T Consensus 102 ~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 102 AATFVRWS-PNEDKFAVGSGARVISVCYFE---QENDWWVSKHLKRP-------------LRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CEEEEECC-TTSSCCEEEESSSCEEECCC--------CCCCEEECSS-------------CCSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEC-CCCCEEEEEecCCeEEEEEEC---CcccceeeeEeecc-------------cCCCeEEEEEcCCCCEEEEE
Confidence 45677786 445544444456677777642 221 2222210 01135678888888766665
Q ss_pred CCCCEEEEEeC
Q 029556 122 KSNHVIRKITN 132 (191)
Q Consensus 122 ~~n~rIr~i~~ 132 (191)
..++.|+.++.
T Consensus 165 ~~d~~i~iwd~ 175 (377)
T 3dwl_C 165 CADRKAYVLSA 175 (377)
T ss_dssp ESSSCEEEEEE
T ss_pred eCCCEEEEEEE
Confidence 55667777775
No 221
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=32.58 E-value=2.7e+02 Score=24.89 Aligned_cols=32 Identities=3% Similarity=0.061 Sum_probs=20.1
Q ss_pred cCCCCEEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 112 DMKGNIYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 112 D~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
...|.+|+++ .+..++.++..++ +.+.++.++
T Consensus 467 t~gg~vf~g~-~dg~l~a~d~~tG--~~l~~~~~~ 498 (668)
T 1kv9_A 467 TAGNLVFQGT-AAGQMHAYSADKG--EALWQFEAQ 498 (668)
T ss_dssp ETTTEEEEEC-TTSEEEEEETTTC--CEEEEEECS
T ss_pred eCCCEEEEEC-CcccchhhhhhcC--hhheEecCC
Confidence 3456778874 5678888888654 344444443
No 222
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=32.31 E-value=1.5e+02 Score=25.41 Aligned_cols=29 Identities=10% Similarity=0.108 Sum_probs=16.1
Q ss_pred ceEEEcCCCCEEE--E-eCCC-CEEEEEeCCCC
Q 029556 107 KSFAVDMKGNIYV--A-DKSN-HVIRKITNLDH 135 (191)
Q Consensus 107 ~gIavD~~G~iyV--a-D~~n-~rIr~i~~~~~ 135 (191)
..++++++|...+ + |.++ ..|+.++.+++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g 185 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG 185 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC
Confidence 5667777776433 2 2222 45777776544
No 223
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.90 E-value=1.8e+02 Score=22.69 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=41.2
Q ss_pred eeeEEEecCCCeEEEE-e-CCCCe--EEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEe
Q 029556 47 PHSVIDRPGSSDLIVL-D-SSRSA--FYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (191)
Q Consensus 47 P~gIav~d~~g~lyVa-D-~~n~~--I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD 121 (191)
+..++++|++..|+++ . .+... |+.+++ .+|+...+.... + ..+++.+ +|.+++..
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~---~~g~~~~l~~~~------~----------~~~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP---ETLENEEVMVMP------P----------CSHLMSNFDGSLMVGD 300 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECT---TTCCEEEEEECC------S----------EEEEEECSSSSEEEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEEC---CCCCeEEeeeCC------C----------CCCCccCCCCceEEEe
Confidence 4556887555555544 2 23334 888875 345444433210 1 0156666 77766543
Q ss_pred C----------------CCCEEEEEeCCCCCceEEE
Q 029556 122 K----------------SNHVIRKITNLDHGNQLIR 141 (191)
Q Consensus 122 ~----------------~n~rIr~i~~~~~~~~~i~ 141 (191)
. ++..|+.++..++....+.
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 301 GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred cCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 2 4578888888665444443
No 224
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=30.69 E-value=1.8e+02 Score=22.34 Aligned_cols=77 Identities=10% Similarity=-0.020 Sum_probs=42.0
Q ss_pred CeeeEEEecCC--CeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 46 NPHSVIDRPGS--SDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 46 ~P~gIav~d~~--g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
....++++|.+ ++++++-...+.|+.++.+.............. + .-.....++++++|...++-..
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~---------~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEE--K---------FPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS--C---------CSSCEEEEEECSSSCCEEEEES
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccc--c---------CCCcEEEEEEcCCCCEEEEecC
Confidence 45789996442 677776667778888876311000011211110 0 1113467888888875554334
Q ss_pred CCEEEEEeCC
Q 029556 124 NHVIRKITNL 133 (191)
Q Consensus 124 n~rIr~i~~~ 133 (191)
++.|+.++..
T Consensus 277 dg~i~iw~~~ 286 (379)
T 3jrp_A 277 DNKVTLWKEN 286 (379)
T ss_dssp SSSEEEEEEE
T ss_pred CCcEEEEeCC
Confidence 5667766653
No 225
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=30.63 E-value=1.9e+02 Score=22.47 Aligned_cols=28 Identities=25% Similarity=0.264 Sum_probs=21.2
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeC
Q 029556 105 KPKSFAVDMKGNIYVADKSNHVIRKITN 132 (191)
Q Consensus 105 ~P~gIavD~~G~iyVaD~~n~rIr~i~~ 132 (191)
....+++.++|...++-...+.|+..+.
T Consensus 288 ~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 288 HAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 3457999999987777666777877664
No 226
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=29.80 E-value=3.6e+02 Score=25.39 Aligned_cols=72 Identities=6% Similarity=-0.011 Sum_probs=44.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.-..++++ +++...++=..++.|+.++. .++. +..+.+. . .....++++++|...++=..+
T Consensus 617 ~v~~~~~s-~~~~~l~s~~~d~~i~vw~~---~~~~~~~~~~~h-----~---------~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 617 AVYHACFS-QDGQRIASCGADKTLQVFKA---ETGEKLLDIKAH-----E---------DEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEET---TTCCEEEEECCC-----S---------SCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEEC-CCCCEEEEEeCCCeEEEEEC---CCCCEEEEeccC-----C---------CCEEEEEEecCCCEEEEEeCC
Confidence 45788997 55655555556778888885 3443 3333221 1 134567888888766665566
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+..+..++
T Consensus 679 ~~v~vwd~~~~ 689 (1249)
T 3sfz_A 679 KKVKIWDSATG 689 (1249)
T ss_dssp SEEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 77888887543
No 227
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=29.33 E-value=2e+02 Score=22.44 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=42.2
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
-..++++ +++.+.++-...+.|+..|+ .+++ +..+.|.. .....+++.++|+..++=...+
T Consensus 79 V~~~~~~-~~~~~l~s~s~D~~v~lwd~---~~~~~~~~~~~h~--------------~~v~~v~~sp~~~~l~s~~~d~ 140 (343)
T 2xzm_R 79 VSDLALS-QENCFAISSSWDKTLRLWDL---RTGTTYKRFVGHQ--------------SEVYSVAFSPDNRQILSAGAER 140 (343)
T ss_dssp EEEEEEC-SSTTEEEEEETTSEEEEEET---TSSCEEEEEECCC--------------SCEEEEEECSSTTEEEEEETTS
T ss_pred eEEEEEC-CCCCEEEEEcCCCcEEEEEC---CCCcEEEEEcCCC--------------CcEEEEEECCCCCEEEEEcCCC
Confidence 4678886 56666677777888998886 3443 34443321 1234677777776555544556
Q ss_pred EEEEEeCC
Q 029556 126 VIRKITNL 133 (191)
Q Consensus 126 rIr~i~~~ 133 (191)
.|+..+..
T Consensus 141 ~i~~wd~~ 148 (343)
T 2xzm_R 141 EIKLWNIL 148 (343)
T ss_dssp CEEEEESS
T ss_pred EEEEEecc
Confidence 67766653
No 228
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=28.46 E-value=2.3e+02 Score=22.70 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=47.3
Q ss_pred CeeeEEEecCCCeEEEE-eCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVL-DSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVa-D~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....+++++++..++++ -..++.|+.++. .++........ .++ -.....++++++|...++-..+
T Consensus 305 ~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~---~~~~~~~~~~~--~~h---------~~~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTHGFPDNNLSIWSY---SSSGLTKQVDI--PAH---------DTRVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCEEEEEEE---ETTEEEEEEEE--ECC---------SSCCCEEEECTTSSEEEEECTT
T ss_pred cEEEEEECCCCCeEEEEeecCCCcEEEEec---CCccceeEEEe--cCC---------CCCEEEEEECCCCCEEEEEeCC
Confidence 57889997444444444 336788888876 24332222110 011 1246788999999877777778
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+..+..++
T Consensus 371 g~i~iw~~~~~ 381 (401)
T 4aez_A 371 ENLKFWRVYDG 381 (401)
T ss_dssp SEEEEEECCC-
T ss_pred CcEEEEECCCC
Confidence 89999987653
No 229
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=27.68 E-value=2.2e+02 Score=22.22 Aligned_cols=73 Identities=8% Similarity=0.044 Sum_probs=44.6
Q ss_pred CeeeEEEecC--CCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCC
Q 029556 46 NPHSVIDRPG--SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (191)
Q Consensus 46 ~P~gIav~d~--~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~ 123 (191)
....++++ + +++.+++-...+.|+.+|+ .+++........ .+ .....+++.++|.+..+=..
T Consensus 127 ~v~~~~~~-~~~~~~~l~s~s~dg~i~~wd~---~~~~~~~~~~~~----~~--------~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 127 EIIYMYGH-NEVNTEYFIWADNRGTIGFQSY---EDDSQYIVHSAK----SD--------VEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp CEEEEECC-C---CCEEEEEETTCCEEEEES---SSSCEEEEECCC----SS--------CCCCEEEECTTSCEEEEECT
T ss_pred CEEEEEcC-CCCCCCEEEEEeCCCcEEEEEC---CCCcEEEEEecC----CC--------CceEEEEECCCCCEEEEEcC
Confidence 35778885 5 6677776667788888886 344432222110 00 12567788888887776566
Q ss_pred CCEEEEEeCCC
Q 029556 124 NHVIRKITNLD 134 (191)
Q Consensus 124 n~rIr~i~~~~ 134 (191)
++.|+.++...
T Consensus 191 dg~i~iwd~~~ 201 (343)
T 3lrv_A 191 DGILDVYNLSS 201 (343)
T ss_dssp TSCEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 67788777643
No 230
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=27.01 E-value=2.1e+02 Score=21.84 Aligned_cols=71 Identities=15% Similarity=0.160 Sum_probs=39.8
Q ss_pred CeeeEEEecCC---CeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEE
Q 029556 46 NPHSVIDRPGS---SDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (191)
Q Consensus 46 ~P~gIav~d~~---g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVa 120 (191)
....++++++. +.++++-..++.|+.++. .+++ +..+.+.. .....+++.+ ++++.++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~---~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINP---ITMQCIKHYVGHG--------------NAINELKFHPRDPNLLLS 133 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECT---TTCCEEEEEESCC--------------SCEEEEEECSSCTTEEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEc---hhceEeeeecCCC--------------CcEEEEEECCCCCCEEEE
Confidence 45788887442 566666667789999985 2343 33333221 1234556665 5555444
Q ss_pred eCCCCEEEEEeCC
Q 029556 121 DKSNHVIRKITNL 133 (191)
Q Consensus 121 D~~n~rIr~i~~~ 133 (191)
=..++.|+..+..
T Consensus 134 ~~~dg~i~iwd~~ 146 (366)
T 3k26_A 134 VSKDHALRLWNIQ 146 (366)
T ss_dssp EETTSCEEEEETT
T ss_pred EeCCCeEEEEEee
Confidence 4445556666653
No 231
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=26.87 E-value=2.5e+02 Score=22.56 Aligned_cols=70 Identities=16% Similarity=0.059 Sum_probs=39.4
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC-CCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~-~G~iyVaD~~n 124 (191)
....++++ ++++..++-...+.|+..|. .+++........ + ....+++.+ +|.+.++-..+
T Consensus 167 ~v~~~~~~-p~~~~l~s~s~d~~v~iwd~---~~~~~~~~~~~~-----~---------~v~~~~~~~~~~~~l~~~s~d 228 (393)
T 1erj_A 167 DIYSLDYF-PSGDKLVSGSGDRTVRIWDL---RTGQCSLTLSIE-----D---------GVTTVAVSPGDGKYIAAGSLD 228 (393)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSEEEEEET---TTTEEEEEEECS-----S---------CEEEEEECSTTCCEEEEEETT
T ss_pred CEEEEEEc-CCCCEEEEecCCCcEEEEEC---CCCeeEEEEEcC-----C---------CcEEEEEECCCCCEEEEEcCC
Confidence 45788896 55666666667788888886 345433322210 0 133455555 45555554455
Q ss_pred CEEEEEeCC
Q 029556 125 HVIRKITNL 133 (191)
Q Consensus 125 ~rIr~i~~~ 133 (191)
+.|+.++..
T Consensus 229 ~~v~iwd~~ 237 (393)
T 1erj_A 229 RAVRVWDSE 237 (393)
T ss_dssp SCEEEEETT
T ss_pred CcEEEEECC
Confidence 556666653
No 232
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=26.41 E-value=2.6e+02 Score=22.77 Aligned_cols=73 Identities=10% Similarity=0.003 Sum_probs=41.5
Q ss_pred CeeeEEEecC--CCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeC
Q 029556 46 NPHSVIDRPG--SSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (191)
Q Consensus 46 ~P~gIav~d~--~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~ 122 (191)
....++++|+ ++.++++-...+.|+.+++ .++. +..+.. +. -.....+++. +|.++++-.
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~---~~~~~~~~~~~----~h---------~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHY---PQCFIVDKWLF----GH---------KHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEE---SCTTCEEEECC----CC---------SSCEEEEEEC-STTEEEEEE
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC---CCCceeeeeec----CC---------CCceEEEEEC-CCCEEEEEe
Confidence 3466777643 1544444445567777765 2232 222210 00 1245678888 887777666
Q ss_pred CCCEEEEEeCCCC
Q 029556 123 SNHVIRKITNLDH 135 (191)
Q Consensus 123 ~n~rIr~i~~~~~ 135 (191)
..+.|+.++...+
T Consensus 260 ~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 260 GDDKIFAWDWKTG 272 (450)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCeEEEEECCCC
Confidence 7788998887654
No 233
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=26.19 E-value=2.5e+02 Score=22.42 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=41.5
Q ss_pred eeeEEEecCCCeEEEEeC-CCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 47 PHSVIDRPGSSDLIVLDS-SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~-~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
++.++++|++..+.++-. ..+.|+..|. .+++.....+.. + ...++++.++|.+.++-.. .
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~---~~~~~~~~~~~~------~--------~V~~v~fspdg~~l~s~s~-~ 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDP---SDLTEKFEIETR------G--------EVKDLHFSTDGKVVAYITG-S 197 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEET---TTTEEEEEEECS------S--------CCCEEEECTTSSEEEEECS-S
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeEC---CCCcEEEEeCCC------C--------ceEEEEEccCCceEEeccc-e
Confidence 567999865555666654 3567888885 455544333211 1 2467888888886665443 4
Q ss_pred EEEEEeCC
Q 029556 126 VIRKITNL 133 (191)
Q Consensus 126 rIr~i~~~ 133 (191)
.+++++..
T Consensus 198 ~~~~~~~~ 205 (365)
T 4h5i_A 198 SLEVISTV 205 (365)
T ss_dssp CEEEEETT
T ss_pred eEEEEEec
Confidence 45666553
No 234
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=25.81 E-value=3.6e+02 Score=24.08 Aligned_cols=73 Identities=7% Similarity=0.049 Sum_probs=45.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~ 125 (191)
....++. |.+|+|||+- . +-+.+++. .++++..+.-.... +. ..-+....|+.|++|+|||+=.+ +
T Consensus 374 ~v~~i~~-d~~g~lWigt-~-~GL~~~~~---~~~~~~~~~~~~~~----~~---~~~~~v~~i~~d~~g~lWigT~~-~ 439 (758)
T 3ott_A 374 RIRHIYE-DKEQQLWIAT-D-GSINRYDY---ATRQFIHYNIVDNT----GT---YNTNWTYYIFEDTAGQLWISTCL-G 439 (758)
T ss_dssp CEEEEEE-CTTSCEEEEE-T-TEEEEEET---TTTEEEEEEEECCC---------CBSSSEEEEEECTTSEEEEEESS-S
T ss_pred ceEEEEE-CCCCCEEEEe-C-CcHhhcCc---CCCcEEEeecCCCc----CC---CCCceEEEEEEcCCCCEEEEECC-C
Confidence 3567777 5889999986 3 47999985 35666555311100 00 01123457889999999998653 3
Q ss_pred EEEEEeC
Q 029556 126 VIRKITN 132 (191)
Q Consensus 126 rIr~i~~ 132 (191)
-|.++++
T Consensus 440 Gl~~~~~ 446 (758)
T 3ott_A 440 GIFVVDK 446 (758)
T ss_dssp CEEEEEH
T ss_pred ceEEEcc
Confidence 4666665
No 235
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=25.26 E-value=22 Score=25.04 Aligned_cols=30 Identities=17% Similarity=0.198 Sum_probs=3.2
Q ss_pred CCccchhHHHHhheeeeeeeccCccEEecCCcE
Q 029556 1 MASHFVYSSLAITLLSLLFSLVSSGLLLEDGYT 33 (191)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~dGy~ 33 (191)
|+++.+.+++++++++.+ .......|+|+.
T Consensus 1 M~~~~~~~~~ll~~~~~~---~~~~~~Cp~gw~ 30 (146)
T 3bx4_B 1 MGRFIFVSFGLLVVFLSL---SGTGADCPSGWS 30 (146)
T ss_dssp ---------------------------CCTTCE
T ss_pred CceeHHHHHHHHHHHHhc---cCCCCCCCcCcE
Confidence 778765555554444332 222224555653
No 236
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=25.18 E-value=7.9 Score=20.97 Aligned_cols=23 Identities=22% Similarity=0.089 Sum_probs=15.9
Q ss_pred CCccchhHHHHhheeeeeeeccC
Q 029556 1 MASHFVYSSLAITLLSLLFSLVS 23 (191)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (191)
|++|.----|+|+|++|+++++.
T Consensus 1 MrkhLG~~wlai~c~LLfs~Ls~ 23 (30)
T 1z65_A 1 MKNRLGTWWVAILCMLLASHLST 23 (30)
T ss_dssp CCSSCSSHHHHHHHHHHHHHTTT
T ss_pred CcchhhhhHHHHHHHHHHhhHHH
Confidence 55665444688888888877765
No 237
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.43 E-value=2.7e+02 Score=22.19 Aligned_cols=75 Identities=11% Similarity=-0.016 Sum_probs=49.9
Q ss_pred eeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCCCE
Q 029556 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n~r 126 (191)
...++++ +++.+.++-..++.|+..|. ..++.....+....++ -..-..+++.++|...++=...+.
T Consensus 301 v~~~~~s-~~g~~l~~g~~dg~i~vwd~---~~~~~~~~~~~~~~~h---------~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 301 VTSVAFS-ISGRLLFAGYSNGDCYVWDT---LLAEMVLNLGTLQNSH---------EGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp CSEEEEC-SSSSEEEEECTTSCEEEEET---TTCCEEEEECCSCSSC---------CCCCCEEEECSSSSEEEEECTTSC
T ss_pred eEEEEEC-CCCCEEEEEECCCCEEEEEC---CCCceEEEEecccCCC---------CCceEEEEECCCCCEEEEeeCCCC
Confidence 4688996 67777777778889999985 3444333222211111 124578899999998888777788
Q ss_pred EEEEeCCC
Q 029556 127 IRKITNLD 134 (191)
Q Consensus 127 Ir~i~~~~ 134 (191)
|+..+..+
T Consensus 368 i~iW~~~~ 375 (380)
T 3iz6_a 368 LKIWAFSG 375 (380)
T ss_dssp EEEEECCS
T ss_pred EEEEecCC
Confidence 88887654
No 238
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=24.30 E-value=2.6e+02 Score=21.95 Aligned_cols=76 Identities=8% Similarity=0.115 Sum_probs=42.1
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce------EEEEecCCCccCCCCCCcccccCCCceEEEcCC-CCEE
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV------VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIY 118 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~------v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~-G~iy 118 (191)
....++++|.+++++++-..++.|+.++.. ++. .....+. . ...-.....+++.++ +.++
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~-~---------~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNNGEIFIWDMN---KCTESPSNYTPLTPGQ-S---------MSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSSSCEEBCBTT---TTSSCTTTCCCBCCCC-S---------CCSSCCCCEEEECSSCTTEE
T ss_pred ceEEEEEcCCCCCEEEEEcCCCeEEEEECC---CCcccccccccccccc-c---------cCCCCCeeEEEeCCCCCcEE
Confidence 457788865446666666677788887752 211 0000000 0 011124567777777 5666
Q ss_pred EEeCCCCEEEEEeCCC
Q 029556 119 VADKSNHVIRKITNLD 134 (191)
Q Consensus 119 VaD~~n~rIr~i~~~~ 134 (191)
++-..++.|+.++...
T Consensus 182 ~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKA 197 (416)
T ss_dssp EEESSSSCEEEEETTT
T ss_pred EEEcCCCCEEEEECCC
Confidence 6655667777777644
No 239
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=23.57 E-value=2.7e+02 Score=21.97 Aligned_cols=74 Identities=15% Similarity=0.096 Sum_probs=46.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
....++++ ++++.+++-...+.|+.+|+ ..+. +..+.... .......+++.++|.+.++-...
T Consensus 242 ~v~~v~~~-p~~~~l~s~s~D~~v~lwd~---~~~~~~~~~~~~~------------~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 242 DVNSVRYY-PSGDAFASGSDDATCRLYDL---RADREVAIYSKES------------IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEET---TTTEEEEEECCTT------------CCSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEEe-CCCCEEEEEeCCCeEEEEEC---CCCcEEEEEcCCC------------cccceeEEEEeCCCCEEEEEECC
Confidence 45788886 56666666667788888886 2333 33322110 11134578888888877776677
Q ss_pred CEEEEEeCCCC
Q 029556 125 HVIRKITNLDH 135 (191)
Q Consensus 125 ~rIr~i~~~~~ 135 (191)
+.|+.++...+
T Consensus 306 ~~i~vwd~~~~ 316 (354)
T 2pbi_B 306 YTINVWDVLKG 316 (354)
T ss_dssp SCEEEEETTTC
T ss_pred CcEEEEECCCC
Confidence 88888887443
No 240
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=23.15 E-value=1.1e+02 Score=17.11 Aligned_cols=25 Identities=12% Similarity=0.217 Sum_probs=17.3
Q ss_pred ccCCCceEEEcCCCCEEEEeCCCCE
Q 029556 102 RFDKPKSFAVDMKGNIYVADKSNHV 126 (191)
Q Consensus 102 ~f~~P~gIavD~~G~iyVaD~~n~r 126 (191)
.|-......+|++|..|+-|..+..
T Consensus 7 ~LP~gWe~~~~~~G~~Yy~nh~t~~ 31 (40)
T 2ysf_A 7 GLPEGWEMRFTVDGIPYFVDHNRRT 31 (40)
T ss_dssp CCCSSEEEEECTTCCEEEEETTTCC
T ss_pred CCCcCcEEEEcCCCCEEEEECCCCc
Confidence 3444455678888999988876543
No 241
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=22.92 E-value=2.8e+02 Score=21.89 Aligned_cols=86 Identities=9% Similarity=-0.003 Sum_probs=44.8
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccc--cC-----CCceEEEcCCCCEE
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSAR--FD-----KPKSFAVDMKGNIY 118 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~--f~-----~P~gIavD~~G~iy 118 (191)
....++++ +++...++-...+.|+..++..........+.+.-.+.+.+.....+. +. ...-+++.++|+..
T Consensus 242 ~v~~~~~s-~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 242 DVVDMKWS-TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp CEEEEEEC-TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred cEEEEEEC-CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 45789996 567777776777889888863211111111111000001011110111 11 11457888888777
Q ss_pred EEeCCCCEEEEEeC
Q 029556 119 VADKSNHVIRKITN 132 (191)
Q Consensus 119 VaD~~n~rIr~i~~ 132 (191)
++=..++++++++.
T Consensus 321 ~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 321 VVWPHTRMIETFKV 334 (355)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEEeCCCeEEEEEE
Confidence 76666788887764
No 242
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=22.07 E-value=3e+02 Score=21.88 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=42.0
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcCC-CCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~-G~iyVaD~~n 124 (191)
....+++++.+..++++-...+.|+..|. .+++......... .-..+..+++.++ ++++++-..+
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~---~~~~~~~~~~~~~-----------~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDT---RCPKPASQIGCSA-----------PGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEET---TSSSCEEECC---------------CCCEEEEEECSSCTTEEEEEETT
T ss_pred ceEEEEecCCCCCceeeeccccccccccc---cccceeeeeecce-----------eeccceeeeecCCCCcceEEeccC
Confidence 44778886555567777777788888875 2333222111100 0113456677664 5566655556
Q ss_pred CEEEEEeCC
Q 029556 125 HVIRKITNL 133 (191)
Q Consensus 125 ~rIr~i~~~ 133 (191)
+.|+.+|..
T Consensus 237 g~v~~wd~~ 245 (344)
T 4gqb_B 237 GTVSLVDTK 245 (344)
T ss_dssp SEEEEEESC
T ss_pred CcEEEEECC
Confidence 777777764
No 243
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=21.74 E-value=4.4e+02 Score=23.70 Aligned_cols=77 Identities=14% Similarity=0.268 Sum_probs=50.7
Q ss_pred CCeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCc---cCCC---------CCC---------ccccc
Q 029556 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQ---GYSD---------GEP---------GSARF 103 (191)
Q Consensus 45 ~~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~---G~~D---------G~~---------~~a~f 103 (191)
.+-+.|..++.++++.++-+.. .|++++ .+|++.+..|.... .+.+ |.+ .+..|
T Consensus 355 ~HiNsv~~d~~dd~~liSsR~~-~I~~Id----~tG~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F 429 (571)
T 3elq_A 355 AHVNSIAYDAKDDSIILSSRHQ-GVVKIG----RDKQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDF 429 (571)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-EEEEEE----TTSCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSC
T ss_pred cEecceeEcCCCCEEEEECCcc-EEEEEc----CCCcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCC
Confidence 3557888864466888888888 999998 37999999986431 1111 210 01233
Q ss_pred C---CCceEEEcCCCCEEEEeCCCCE
Q 029556 104 D---KPKSFAVDMKGNIYVADKSNHV 126 (191)
Q Consensus 104 ~---~P~gIavD~~G~iyVaD~~n~r 126 (191)
. ..+...+-++|+|.+-|-++.|
T Consensus 430 ~~~~gQH~a~~~~~g~i~vFDNg~~~ 455 (571)
T 3elq_A 430 DFTYTQHTAWISSKGTLTIFDNGDGR 455 (571)
T ss_dssp CCCSSCEEEEECTTSCEEEEECCTTG
T ss_pred ccccCCcCeEEcCCCeEEEEeCCCCC
Confidence 2 2567777778999999977653
No 244
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=21.59 E-value=2.7e+02 Score=21.15 Aligned_cols=62 Identities=8% Similarity=0.005 Sum_probs=38.3
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCceEEEEecCCCccCCCCCCcccccCCCceEEEcC---CCCEEEEeCCCCEEEEEe
Q 029556 55 GSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM---KGNIYVADKSNHVIRKIT 131 (191)
Q Consensus 55 ~~g~lyVaD~~n~~I~~~d~~~~~~g~v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~---~G~iyVaD~~n~rIr~i~ 131 (191)
++++.+++-..++.|+.++. .+++.....+.. .....+++++ +++.+++-..++.|+.++
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~---~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDL---RNMALRWETNIK--------------NGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp -CCCEEEEEETTSEEEEEET---TTTEEEEEEECS--------------SCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEEC---ccCceeeecCCC--------------CceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 56666666667788999986 345543332211 1356778887 677666555667888777
Q ss_pred CC
Q 029556 132 NL 133 (191)
Q Consensus 132 ~~ 133 (191)
..
T Consensus 241 ~~ 242 (357)
T 3i2n_A 241 MR 242 (357)
T ss_dssp EE
T ss_pred Cc
Confidence 63
No 245
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=21.14 E-value=2.4e+02 Score=21.97 Aligned_cols=30 Identities=7% Similarity=-0.004 Sum_probs=20.5
Q ss_pred CceEEEcCCCCEEEEeCCCCEEEEEeCCCC
Q 029556 106 PKSFAVDMKGNIYVADKSNHVIRKITNLDH 135 (191)
Q Consensus 106 P~gIavD~~G~iyVaD~~n~rIr~i~~~~~ 135 (191)
...++++++|.+.++-..++.|+.++....
T Consensus 208 v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 208 VHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 567888888886665556678888776543
No 246
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=20.79 E-value=1.4e+02 Score=26.30 Aligned_cols=28 Identities=7% Similarity=0.120 Sum_probs=17.1
Q ss_pred eeeEEEecCCCeEEEEeC--------CCCeEEEEec
Q 029556 47 PHSVIDRPGSSDLIVLDS--------SRSAFYTLSF 74 (191)
Q Consensus 47 P~gIav~d~~g~lyVaD~--------~n~~I~~~d~ 74 (191)
...++++|++..|.++.. ....|+..+.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 567889865555554432 1357777775
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=20.72 E-value=4.3e+02 Score=23.19 Aligned_cols=32 Identities=0% Similarity=0.066 Sum_probs=20.6
Q ss_pred cCCCCEEEEeCCCCEEEEEeCCCCCceEEEEeccC
Q 029556 112 DMKGNIYVADKSNHVIRKITNLDHGNQLIRQINLK 146 (191)
Q Consensus 112 D~~G~iyVaD~~n~rIr~i~~~~~~~~~i~~i~~~ 146 (191)
...|.+|+++ .++.++.+|.+++ +.+-+..++
T Consensus 495 tagglvf~g~-~dg~l~A~D~~tG--~~lW~~~~~ 526 (582)
T 1flg_A 495 TAGNLVFTGT-GDGYFKAFDAKSG--KELWKFQTG 526 (582)
T ss_dssp ETTTEEEEEC-TTSEEEEEETTTC--CEEEEEECS
T ss_pred eCCCEEEEEC-CCCcEEEEECCCC--CEEEEecCC
Confidence 3457788876 4678999998665 344444443
No 248
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.51 E-value=3e+02 Score=21.34 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=21.4
Q ss_pred eeeEEEecCCCeEE-EEeC-CCCeEEEEecCCCCCceEEEE
Q 029556 47 PHSVIDRPGSSDLI-VLDS-SRSAFYTLSFPLSEESVVKRL 85 (191)
Q Consensus 47 P~gIav~d~~g~ly-VaD~-~n~~I~~~d~~~~~~g~v~~~ 85 (191)
+..++++|++..|. +.+. ++..|+.++. .+++...+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~---~~~~~~~l 75 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNL---ETQQAVQL 75 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEET---TTTEEEEC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEEC---CCCcEEEe
Confidence 56678876555654 4443 4457888875 34554443
No 249
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=20.39 E-value=2.9e+02 Score=21.08 Aligned_cols=71 Identities=8% Similarity=0.040 Sum_probs=42.6
Q ss_pred CeeeEEEecCCCeEEEEeCCCCeEEEEecCCCCCce-EEEEecCCCccCCCCCCcccccCCCceEEEcCCCCEEEEeCCC
Q 029556 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (191)
Q Consensus 46 ~P~gIav~d~~g~lyVaD~~n~~I~~~d~~~~~~g~-v~~~aG~~~~G~~DG~~~~a~f~~P~gIavD~~G~iyVaD~~n 124 (191)
.-..++++ +++...++-...+.|+..+. .++. +..+.+... .-..+++.++|+..++=...
T Consensus 15 ~V~~~~fs-p~~~~l~s~~~dg~v~lWd~---~~~~~~~~~~~~~~--------------~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 15 RVKGIDFH-PTEPWVLTTLYSGRVELWNY---ETQVEVRSIQVTET--------------PVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CEEEEEEC-SSSSEEEEEETTSEEEEEET---TTTEEEEEEECCSS--------------CEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEEC-CCCCEEEEEcCCCcEEEEEC---CCCceeEEeeccCC--------------cEEEEEEeCCCCEEEEECCC
Confidence 56889996 56666666667788999886 3443 333332210 12345566666666655556
Q ss_pred CEEEEEeCCC
Q 029556 125 HVIRKITNLD 134 (191)
Q Consensus 125 ~rIr~i~~~~ 134 (191)
+.|+..+...
T Consensus 77 ~~i~vwd~~~ 86 (304)
T 2ynn_A 77 FRIRVFNYNT 86 (304)
T ss_dssp SEEEEEETTT
T ss_pred CEEEEEECCC
Confidence 6777777643
Done!