BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029557
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VXU6|DI194_ARATH Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana
GN=DI19-4 PE=1 SV=1
Length = 224
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 105/156 (67%), Gaps = 5/156 (3%)
Query: 40 YEEVKGE----YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHI 95
YE+++GE E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GVCPVC RV +D+V HI
Sbjct: 34 YEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHI 93
Query: 96 TTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDPWL- 154
TTQH N + +L +G +ST +L+KEL+ A+ QSLL SSS SS+ SDP L
Sbjct: 94 TTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLS 153
Query: 155 SFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFE 190
SF++N P+ ++S + T A K S +++ +
Sbjct: 154 SFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLK 189
>sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana
GN=DI19-7 PE=1 SV=2
Length = 211
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 92/132 (69%), Gaps = 8/132 (6%)
Query: 34 DIE-EDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMV 92
D+E EDD + E+ CPFC+++FD+VGLCCHID HPVEAK+GVCPVC +V +D+V
Sbjct: 32 DVEGEDDLKA-----EFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIV 86
Query: 93 DHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDP 152
HITTQHGN+ + +L KG +ST +L+KEL+ A+ QS L SS+ + SS SDP
Sbjct: 87 GHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQS-LGGSSTFIPSSNIDSDP 145
Query: 153 WL-SFIYNMPTA 163
L SF++ P+A
Sbjct: 146 LLSSFMFKPPSA 157
>sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana
GN=DI19-3 PE=1 SV=1
Length = 223
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 1 MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIE-EDDYEEVKGEYEYPCPFCSEDFD 59
MD + S++R YQ S+ +D + FE+I+ E+++ E E+ CPFCS+ FD
Sbjct: 1 MDSDSWSDRLASATRRYQLAFPSR-SDTFLGFEEIDGEEEFRE-----EFACPFCSDYFD 54
Query: 60 LVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNST 119
+V LCCHIDE+HP+EAK+GVCPVC RV +DMV HIT QH NI K K +G S ST
Sbjct: 55 IVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYST 114
Query: 120 ISSLRKELQNAHFQSLLA---RSSSSVSSSKKTSDPWLSFIYNMPTADESESIQPALSTG 176
+S LR+E + +FQSL SS SSS +DP LS + P AD + + +S
Sbjct: 115 LSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFIS-PIADGFFTTESCISAE 173
Query: 177 EGAEDKSSCE 186
G K++ +
Sbjct: 174 TGPVKKTTIQ 183
>sp|Q6NM26|DI196_ARATH Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana
GN=DI19-6 PE=1 SV=1
Length = 222
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 103/168 (61%), Gaps = 10/168 (5%)
Query: 1 MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIE-EDDYEEVKGEYEYPCPFCSEDFD 59
MD + S+SR YQ S+ +F + FE+IE EDD+ E EY CPFCS+ FD
Sbjct: 1 MDSDSWSDRLASASRRYQLDFLSRSDNF-LGFEEIEGEDDFRE-----EYACPFCSDYFD 54
Query: 60 LVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNST 119
+V LCCHIDE+HP++AK+GVCP+C +V+ DM+ HIT QH N+ K K +G + S
Sbjct: 55 IVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSM 114
Query: 120 ISSLRKELQNAHFQSLL--ARSSSSVSSSKKTSDPWLSFIYNMPTADE 165
+S L++E + +FQSL + S SS+ +DP LS + P AD+
Sbjct: 115 LSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFIS-PMADD 161
>sp|O04259|DI195_ARATH Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana
GN=DI19-5 PE=1 SV=2
Length = 214
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 100/167 (59%), Gaps = 20/167 (11%)
Query: 29 CIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88
CI+FED +E +YPCPFCS+D+DLV LC HIDEEH ++A +G+CPVC RV
Sbjct: 30 CIEFEDDDE-------MAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVK 82
Query: 89 MDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKK 148
M MVDHITTQH ++ +L+K S S S ++ + QSL+ S+ +SK
Sbjct: 83 MHMVDHITTQHRDVFK-----RLYKDESYSAFSPGTRK----YLQSLIDEPLSTNHTSKS 133
Query: 149 TSDPWLSFIYNMPTADESESIQPALSTGEGAEDKS----SCEKTFET 191
DP LSFIYN P+ +S+ +QP S+ ED S S EK +E+
Sbjct: 134 VLDPLLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES 180
>sp|Q39083|DI191_ARATH Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1
PE=1 SV=2
Length = 206
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 103/156 (66%), Gaps = 11/156 (7%)
Query: 14 SRNYQSTLKSQFADFCIDFEDIE-EDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHP 72
S+ + +TL+S+ ++ + FE+I+ +DD++E E+ CPFC+E +D++GLCCHID+EH
Sbjct: 5 SKRFLATLRSR-SEMLMGFEEIDGDDDFQE-----EFACPFCAESYDIIGLCCHIDDEHT 58
Query: 73 VEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHF 132
+E+K+ VCPVC +V +D+V HIT HG++ K K K +NST+S LRKEL+
Sbjct: 59 LESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSGTNSTLSLLRKELREGDL 118
Query: 133 QSLLARSSSSVS-SSKKTSDPWL-SFIYNMPTADES 166
Q LL +S + S +S T DP L SFI PT +S
Sbjct: 119 QRLLGFTSRNGSVASSVTPDPLLSSFIS--PTRSQS 152
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 27 DFCIDFEDIEEDDYEEVK---GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVC 83
D + F+D + EEV+ G Y CPFC EDFD V CCH+D+EH VEAKSGVCP+C
Sbjct: 29 DLYMGFDDADAAGVEEVEARGGGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPIC 88
Query: 84 VTRVTMDMVDHITTQHGNISNSWHKLKLHK--GNSNSTISSLRKELQNAHFQSLLARSSS 141
TRV +D++ H+T QHG+ + ++ K S+S +S LRK+L++ QS L SS
Sbjct: 89 ATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSY 148
Query: 142 SVSSSKKTSDPWL-SFIYNMPTADESESI 169
+ DP+L S I ++P A+ S+ +
Sbjct: 149 VSNPPAAAPDPFLSSLICSLPVAEPSKDL 177
>sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica
GN=DI19-1 PE=2 SV=1
Length = 226
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 102/185 (55%), Gaps = 14/185 (7%)
Query: 1 MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIEEDDY-EEVKGEYEYPCPFCSEDFD 59
MD + ++ R Y + L D +EE D EEV+ E+ CP+C ED D
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGHA------DRAGMEEVDMDEEVRPEFA--CPYCYEDHD 52
Query: 60 LVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNST 119
+V LC H++EEHP E + CP+C ++ DM++HIT QHG + + +L+ +
Sbjct: 53 VVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQA 112
Query: 120 ISSLRKELQNAHFQSLLA----RSSSSVSSSKKTSDPWL-SFIYNMPTADESESIQPALS 174
+S L ++L+ AH Q LL RS++S +++ ++DP L SF + PT+D E+ +P +S
Sbjct: 113 LSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPIS 172
Query: 175 TGEGA 179
+ A
Sbjct: 173 IPDDA 177
>sp|Q8GWK1|DI192_ARATH Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana
GN=DI19-2 PE=1 SV=1
Length = 221
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 32 FEDIEEDDYEEVKGE--YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTM 89
++D+EE +EEV + EYPCPFC+ D+DLV LC HIDEEH EA +G+CPVC RV M
Sbjct: 30 YQDLEE--FEEVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKM 87
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKT 149
MVDHIT+ H ++ S K ++ + L + H L + SK
Sbjct: 88 HMVDHITSHHRDVLKSEQKEMSYRED-----PYLSDKYLQPHLDELPPSMNHHQHPSKHV 142
Query: 150 SDPWLSFIYNMPTADESESIQP 171
SD +LSFI N ++++ + P
Sbjct: 143 SDQFLSFINNSALPNQTKLVLP 164
>sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp.
japonica GN=DI19-3 PE=2 SV=1
Length = 246
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 51 CPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLK 110
CP+C ED D+ LC H++E+HP E + CP+C ++T DM++HIT QHG + S +++
Sbjct: 64 CPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGRRMR 123
Query: 111 LHKGNSNSTISSLRKELQNAHFQSLLA----RSSSSVSSSKKTSDPWL-SFIYNMPTADE 165
+ +S L ++L++A Q+LL + S+ +++ ++DP L SF T D
Sbjct: 124 RFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDS 183
Query: 166 SE 167
E
Sbjct: 184 EE 185
>sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp.
japonica GN=DI19-4 PE=2 SV=1
Length = 245
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 32 FEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDM 91
++D+E +D EV+ ++ PCP+C ED D+ LC H+++EHP E+K CPVC R++ D+
Sbjct: 47 YDDVEPED--EVRPDF--PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDL 102
Query: 92 VDHITTQHGNI--SNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKT 149
+DHIT QH + H+L+ SN +S ++LQ + + LL SS S ++ +
Sbjct: 103 LDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAAS 162
Query: 150 S 150
S
Sbjct: 163 S 163
>sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp.
japonica GN=DI19-5 PE=2 SV=1
Length = 202
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 49 YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHK 108
+PCPFC + ++ +C H+ EEH + ++ VCP+C + DM H QH H
Sbjct: 37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHS------HL 90
Query: 109 LKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDPWLS-FIYNMPTAD 164
LK K + S+ + +F+ ++ + DP LS FI +M D
Sbjct: 91 LKRRKPSRPSSSWPTPSNNSDPYFEGPPQYMMNNRTYQDPAPDPLLSQFICSMAQTD 147
>sp|Q7XBA5|DI196_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp.
japonica GN=DI19-6 PE=2 SV=1
Length = 208
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 40 YEEVKGEYEY----PCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHI 95
Y E+ G+ E+ PCPFC + ++ LC H+ EEH + K+ VCP+C + D +H
Sbjct: 24 YSEIAGDDEWWEYIPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHF 83
Query: 96 TTQHGNI 102
QH ++
Sbjct: 84 RVQHSHL 90
>sp|Q6J1I8|RN114_PIG RING finger protein 114 OS=Sus scrofa GN=RNF114 PE=2 SV=1
Length = 228
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICASMPWGDPNYRSANFIEH 194
Query: 95 ITTQH 99
I +H
Sbjct: 195 IQRRH 199
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 136 VPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICASMPWGDPSYRSANFMEH 195
Query: 95 ITTQH 99
I +H
Sbjct: 196 IQRRH 200
>sp|Q4U5R4|RN114_BOVIN RING finger protein 114 OS=Bos taurus GN=RNF114 PE=2 SV=1
Length = 230
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 137 VPNRYTFPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICASMPWGDPNYRSANFIEH 196
Query: 95 ITTQH 99
+ +H
Sbjct: 197 LQRRH 201
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
+ Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 136 IPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICASMPWGDPSYRSANFMEH 195
Query: 95 ITTQH 99
I +H
Sbjct: 196 IQRRH 200
>sp|Q9Y508|RN114_HUMAN RING finger protein 114 OS=Homo sapiens GN=RNF114 PE=1 SV=1
Length = 228
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICAS 178
>sp|Q6J212|RN114_PANTR RING finger protein 114 OS=Pan troglodytes GN=RNF114 PE=2 SV=1
Length = 228
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICAS 178
>sp|Q9UKY1|ZHX1_HUMAN Zinc fingers and homeoboxes protein 1 OS=Homo sapiens GN=ZHX1 PE=1
SV=1
Length = 873
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A2T7S4|ZHX1_PONPY Zinc fingers and homeoboxes protein 1 OS=Pongo pygmaeus GN=ZHX1
PE=3 SV=1
Length = 873
Score = 36.6 bits (83), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A2T771|ZHX1_PANTR Zinc fingers and homeoboxes protein 1 OS=Pan troglodytes GN=ZHX1
PE=3 SV=1
Length = 873
Score = 36.6 bits (83), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A1YG99|ZHX1_PANPA Zinc fingers and homeoboxes protein 1 OS=Pan paniscus GN=ZHX1 PE=3
SV=1
Length = 873
Score = 36.6 bits (83), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A1YF22|ZHX1_GORGO Zinc fingers and homeoboxes protein 1 OS=Gorilla gorilla gorilla
GN=ZHX1 PE=3 SV=1
Length = 873
Score = 36.6 bits (83), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|Q8R515|ZHX1_RAT Zinc fingers and homeoboxes protein 1 OS=Rattus norvegicus GN=Zhx1
PE=2 SV=1
Length = 873
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|P70121|ZHX1_MOUSE Zinc fingers and homeoboxes protein 1 OS=Mus musculus GN=Zhx1 PE=1
SV=2
Length = 873
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 35 IEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTMDM 91
++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 56 VDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC-------- 107
Query: 92 VDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 -NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN=ZNF536 PE=1 SV=3
Length = 1300
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 18/117 (15%)
Query: 16 NYQSTLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEA 75
+ Q L Q DIE+D + K YPCP C + F + H E
Sbjct: 101 DLQQFLNGQNLGIMSQMSDIEDDARKNRK----YPCPLCGKRFRFNSILSLHMRTHTGE- 155
Query: 76 KSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK-GNSNSTISSLRKELQNAH 131
K CP C DH Q GN+ H L+ HK GN +R+E + H
Sbjct: 156 KPFKCPYC---------DHRAAQKGNL--KIH-LRTHKLGNLGKGRGRVREENRLLH 200
>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN=Znf536 PE=2 SV=1
Length = 1302
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 18/112 (16%)
Query: 16 NYQSTLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEA 75
+ Q L Q DIE+D + K YPCP C + F + H E
Sbjct: 101 DLQQFLNGQNLGIMSQMSDIEDDARKNRK----YPCPLCGKRFRFNSILSLHMRTHTGE- 155
Query: 76 KSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK-GNSNSTISSLRKE 126
K CP C DH Q GN+ H L+ HK GN +R+E
Sbjct: 156 KPFKCPYC---------DHRAAQKGNL--KIH-LRTHKLGNLGKGRGRVREE 195
>sp|F6YVB9|E2F7_XENTR Transcription factor E2F7 OS=Xenopus tropicalis GN=e2f7 PE=3 SV=1
Length = 862
Score = 33.5 bits (75), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 70 EHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQN 129
E V+ + P+ V+ V+ H ++S S H KLHK + ST S+R ++
Sbjct: 763 EPAVDQTKNLSPLSVSPVSAKCASSKADSHDSLSQSIHTAKLHKSPTPSTPKSIRPLHKD 822
Query: 130 AHFQSLLARSSSSVSSSKK 148
A F++ S VSSS+K
Sbjct: 823 AFFKT---PGSLDVSSSRK 838
>sp|O76075|DFFB_HUMAN DNA fragmentation factor subunit beta OS=Homo sapiens GN=DFFB PE=1
SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPV 73
E I+E D EV EY Y F SE+ LV + CH H +
Sbjct: 274 EAIKEQDGREVDWEYFYGLLFTSENLKLVHIVCHKKTTHKL 314
>sp|Q1L721|RN138_XENLA E3 ubiquitin-protein ligase RNF138 OS=Xenopus laevis GN=rnf138 PE=1
SV=1
Length = 222
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 46 EYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT-------RVTMDMVDHITT 97
E +Y CP CSE + + L H + H E VCP+C T + T +++ H+
Sbjct: 131 EPKYKCPLCSEHNLNQRSLLEHCNNVHYYEEVEMVCPICATLPWGDPIQTTGNVIAHLNA 190
Query: 98 QH 99
+H
Sbjct: 191 RH 192
>sp|Q14168|MPP2_HUMAN MAGUK p55 subfamily member 2 OS=Homo sapiens GN=MPP2 PE=1 SV=3
Length = 576
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 112 HKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDPWLSFIYNMPTADESESIQP 171
H +ST + L LQ HFQSLL S S + +T P P D + S QP
Sbjct: 104 HVAEQSSTAAELAHILQEPHFQSLLETHDSVASKTYETPPP-------SPGLDPTFSNQP 156
>sp|P24918|NDUS1_NEUCR NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-78 PE=1 SV=2
Length = 744
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 108 KLKLHKGNSNSTISS--LRKELQNAHFQSLLARSSSSV---SSSKKTSDPWLSFI 157
K++L + N +T ++ L+K ++N +F ++RSS ++ S++KKT DP +F+
Sbjct: 673 KVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSAAKKTGDPRTNFM 727
>sp|Q4I9U7|DPH3_GIBZE Diphthamide biosynthesis protein 3 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DPH3 PE=3
SV=1
Length = 108
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 34 DIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVC--VTRVTMDM 91
+IE+ ++E G Y++PCP C + F + E+ E VCP C + RV D+
Sbjct: 14 EIEDMTFDEAMGVYQFPCP-CGDKFQITL------EDLLDEQDIAVCPSCSLMIRVIFDL 66
Query: 92 VDHITTQHGNI 102
+ T + N+
Sbjct: 67 LISPRTIYQNL 77
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|A1BAL4|MURC_PARDP UDP-N-acetylmuramate--L-alanine ligase OS=Paracoccus denitrificans
(strain Pd 1222) GN=murC PE=3 SV=1
Length = 475
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 21/48 (43%)
Query: 19 STLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCH 66
S L S F DFC F + + EV E P P S D + GL H
Sbjct: 376 SRLSSLFDDFCTCFNEADVVAIAEVYSAGEEPIPGASRDDLVAGLIAH 423
>sp|Q08683|APC5_YEAST Anaphase-promoting complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APC5 PE=1 SV=1
Length = 685
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 10 STSSSRNYQSTLKSQFADFCIDFEDIEEDDYEEVK 44
S+SS RNY S++ +Q D + F+ +EEDD+ +VK
Sbjct: 497 SSSSLRNYDSSIINQ--DIKVAFKALEEDDFLKVK 529
>sp|Q2RVU5|MURC_RHORT UDP-N-acetylmuramate--L-alanine ligase OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=murC PE=3 SV=1
Length = 481
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 28/70 (40%)
Query: 19 STLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSG 78
S L S F DFC F D ++ +V E P P S++ GL H + V
Sbjct: 370 SRLNSLFEDFCTCFNDADQVVVADVYAAGEQPIPGASKEALAEGLKVHGHKSVHVLTNEQ 429
Query: 79 VCPVCVTRVT 88
P + R+
Sbjct: 430 ALPELIARIA 439
>sp|P17789|TTKB_DROME Protein tramtrack, beta isoform OS=Drosophila melanogaster GN=ttk
PE=1 SV=2
Length = 643
Score = 30.0 bits (66), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 39 DYEEVKGEYEYPCPFCSEDFDLV-GLCCHIDEEHPVEAKSGVCPVCVTRVTM--DMVDHI 95
DY +GE+ Y C CS + + C H H K CP C T +M H+
Sbjct: 498 DYCTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 557
Query: 96 TTQH 99
H
Sbjct: 558 KIIH 561
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,857,393
Number of Sequences: 539616
Number of extensions: 2775141
Number of successful extensions: 7784
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 7689
Number of HSP's gapped (non-prelim): 133
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)