Query 029557
Match_columns 191
No_of_seqs 153 out of 190
Neff 4.2
Searched_HMMs 29240
Date Tue Mar 26 00:32:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029557.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029557hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.6 4.7E-05 1.6E-09 49.2 3.5 54 47-100 9-65 (66)
2 2ct1_A Transcriptional repress 97.5 7.6E-05 2.6E-09 49.9 3.8 54 48-101 15-71 (77)
3 3uk3_C Zinc finger protein 217 97.2 0.00026 8.9E-09 44.2 2.9 52 47-100 3-57 (57)
4 2yt9_A Zinc finger-containing 96.9 0.00084 2.9E-08 45.7 4.2 51 48-100 7-60 (95)
5 1x5w_A Zinc finger protein 64, 96.9 0.00077 2.6E-08 44.1 3.3 53 47-101 8-63 (70)
6 1x6h_A Transcriptional repress 96.8 0.0011 3.6E-08 44.3 3.9 55 47-101 14-73 (86)
7 2eod_A TNF receptor-associated 96.8 0.001 3.4E-08 43.4 3.4 48 47-97 9-59 (66)
8 1bbo_A Human enhancer-binding 96.7 0.0017 5.9E-08 40.3 4.1 50 49-100 2-54 (57)
9 1x6e_A Zinc finger protein 24; 96.6 0.0017 5.7E-08 42.8 3.3 52 47-100 13-67 (72)
10 2adr_A ADR1; transcription reg 96.5 0.0026 9E-08 40.0 4.0 51 48-100 2-55 (60)
11 2ctd_A Zinc finger protein 512 96.4 0.0027 9.2E-08 45.4 3.7 51 47-100 33-87 (96)
12 2gqj_A Zinc finger protein KIA 96.4 0.00049 1.7E-08 48.5 -0.2 54 47-101 23-80 (98)
13 2cot_A Zinc finger protein 435 96.4 0.0042 1.4E-07 41.2 4.3 52 47-100 17-71 (77)
14 2dmd_A Zinc finger protein 64, 96.3 0.0032 1.1E-07 42.9 3.7 50 48-99 8-60 (96)
15 2dlq_A GLI-kruppel family memb 96.2 0.0043 1.5E-07 43.8 4.0 53 48-100 35-91 (124)
16 2wbt_A B-129; zinc finger; 2.7 96.2 0.0041 1.4E-07 44.9 3.9 51 48-102 74-127 (129)
17 2kmk_A Zinc finger protein GFI 96.2 0.0029 9.9E-08 41.6 2.6 49 48-98 29-80 (82)
18 2ee8_A Protein ODD-skipped-rel 96.1 0.0072 2.5E-07 41.9 4.6 52 47-100 16-70 (106)
19 1a1h_A QGSR zinc finger peptid 96.1 0.004 1.4E-07 41.8 3.2 50 48-99 34-86 (90)
20 2ej4_A Zinc finger protein ZIC 96.1 0.0067 2.3E-07 41.3 4.2 54 47-100 24-87 (95)
21 2d9h_A Zinc finger protein 692 96.0 0.0025 8.6E-08 42.3 1.9 56 47-102 6-65 (78)
22 2rpc_A Zinc finger protein ZIC 96.0 0.0063 2.1E-07 45.0 4.2 54 47-100 24-87 (155)
23 2lce_A B-cell lymphoma 6 prote 96.0 0.0058 2E-07 40.2 3.5 52 47-100 16-70 (74)
24 2dlq_A GLI-kruppel family memb 95.9 0.0057 1.9E-07 43.1 3.5 53 47-101 65-120 (124)
25 2yt9_A Zinc finger-containing 95.9 0.0048 1.6E-07 41.9 3.0 55 47-101 34-91 (95)
26 2dmd_A Zinc finger protein 64, 95.9 0.0075 2.6E-07 41.0 4.0 53 47-101 35-90 (96)
27 2csh_A Zinc finger protein 297 95.9 0.0058 2E-07 42.8 3.4 53 48-102 37-92 (110)
28 2d9k_A FLN29 gene product; zin 95.8 0.0018 6.2E-08 44.5 0.4 48 48-98 17-65 (75)
29 2ee8_A Protein ODD-skipped-rel 95.8 0.011 3.8E-07 40.9 4.5 52 47-100 44-98 (106)
30 2kmk_A Zinc finger protein GFI 95.7 0.0049 1.7E-07 40.5 2.3 50 49-100 2-54 (82)
31 2lv2_A Insulinoma-associated p 95.7 0.0086 2.9E-07 42.7 3.7 53 47-101 27-82 (85)
32 2epx_A Zinc finger protein 28 95.3 0.019 6.3E-07 34.2 3.5 36 47-83 11-47 (47)
33 1llm_C Chimera of ZIF23-GCN4; 95.1 0.0096 3.3E-07 40.4 2.0 54 48-103 3-59 (88)
34 2ytn_A Zinc finger protein 347 95.0 0.029 1E-06 33.4 3.9 35 47-83 11-46 (46)
35 2eq0_A Zinc finger protein 347 95.0 0.023 8E-07 33.8 3.5 35 47-83 11-46 (46)
36 4gzn_C ZFP-57, zinc finger pro 94.9 0.018 6.2E-07 38.4 3.1 49 48-98 4-55 (60)
37 1llm_C Chimera of ZIF23-GCN4; 94.9 0.0024 8.3E-08 43.4 -1.4 52 48-102 31-85 (88)
38 1wge_A Hypothetical protein 26 94.9 0.0081 2.8E-07 44.1 1.4 47 30-88 15-63 (83)
39 2eop_A Zinc finger protein 268 94.9 0.03 1E-06 33.2 3.7 35 47-83 11-46 (46)
40 2jr7_A DPH3 homolog; DESR1, CS 94.9 0.0079 2.7E-07 44.8 1.2 47 30-88 8-56 (89)
41 2dlk_A Novel protein; ZF-C2H2 94.8 0.02 6.8E-07 37.5 3.1 53 47-100 6-65 (79)
42 2em0_A Zinc finger protein 224 94.8 0.03 1E-06 33.3 3.6 35 47-83 11-46 (46)
43 1ubd_C Protein (YY1 zinc finge 94.8 0.026 9E-07 40.0 3.9 51 47-100 4-59 (124)
44 1wjp_A Zinc finger protein 295 94.8 0.018 6E-07 40.3 2.9 45 48-96 16-63 (107)
45 2ema_A Zinc finger protein 347 94.8 0.024 8.1E-07 33.8 3.1 35 47-83 11-46 (46)
46 2ebt_A Krueppel-like factor 5; 94.6 0.032 1.1E-06 37.9 3.8 52 47-100 14-72 (100)
47 2ene_A Zinc finger protein 347 94.6 0.033 1.1E-06 33.1 3.3 35 47-83 11-46 (46)
48 2eoq_A Zinc finger protein 224 94.5 0.038 1.3E-06 32.9 3.5 35 47-83 11-46 (46)
49 2gli_A Protein (five-finger GL 94.5 0.016 5.6E-07 42.5 2.2 52 47-100 66-124 (155)
50 1a1h_A QGSR zinc finger peptid 94.4 0.021 7.1E-07 38.1 2.5 52 47-100 3-59 (90)
51 2eps_A POZ-, at HOOK-, and zin 94.4 0.037 1.3E-06 34.6 3.4 39 47-86 11-50 (54)
52 2ep2_A Zinc finger protein 484 94.4 0.037 1.3E-06 32.9 3.3 35 47-83 11-46 (46)
53 2em5_A ZFP-95, zinc finger pro 94.4 0.036 1.2E-06 33.0 3.2 35 47-83 11-46 (46)
54 2ytq_A Zinc finger protein 268 94.3 0.045 1.6E-06 32.6 3.6 34 48-83 12-46 (46)
55 2ghf_A ZHX1, zinc fingers and 94.3 0.03 1E-06 41.1 3.3 51 47-97 17-73 (102)
56 2emy_A Zinc finger protein 268 94.3 0.03 1E-06 33.3 2.7 35 47-83 11-46 (46)
57 1f2i_G Fusion of N-terminal 17 94.3 0.028 9.6E-07 36.5 2.7 49 47-97 18-71 (73)
58 1wjp_A Zinc finger protein 295 94.3 0.024 8.2E-07 39.6 2.5 50 48-100 42-94 (107)
59 2i13_A AART; DNA binding, zinc 94.2 0.027 9.3E-07 43.1 3.0 51 48-100 105-158 (190)
60 2eov_A Zinc finger protein 484 94.2 0.036 1.2E-06 32.8 2.9 34 48-83 12-46 (46)
61 2em9_A Zinc finger protein 224 94.1 0.045 1.6E-06 32.4 3.3 35 47-83 11-46 (46)
62 2ytk_A Zinc finger protein 347 94.1 0.03 1E-06 33.3 2.5 35 47-83 11-46 (46)
63 2el4_A Zinc finger protein 268 94.1 0.049 1.7E-06 32.2 3.4 34 48-83 12-46 (46)
64 2enc_A Zinc finger protein 224 94.1 0.047 1.6E-06 32.4 3.3 34 48-83 12-46 (46)
65 2ytr_A Zinc finger protein 347 94.1 0.051 1.8E-06 32.1 3.4 34 48-83 12-46 (46)
66 2epw_A Zinc finger protein 268 94.1 0.037 1.3E-06 32.8 2.7 34 48-83 12-46 (46)
67 1yop_A KTI11P; zinc finger, me 94.0 0.014 4.7E-07 42.9 0.8 47 30-88 8-56 (83)
68 2eq4_A Zinc finger protein 224 94.0 0.048 1.6E-06 32.3 3.2 35 47-83 11-46 (46)
69 2emk_A Zinc finger protein 28 94.0 0.043 1.5E-06 32.7 3.0 34 48-83 12-46 (46)
70 2ytj_A Zinc finger protein 484 94.0 0.049 1.7E-06 32.3 3.2 35 47-83 11-46 (46)
71 2epz_A Zinc finger protein 28 94.0 0.061 2.1E-06 31.9 3.6 34 48-83 12-46 (46)
72 2emf_A Zinc finger protein 484 93.9 0.058 2E-06 32.1 3.5 35 47-83 11-46 (46)
73 1tf6_A Protein (transcription 93.8 0.061 2.1E-06 41.1 4.3 53 48-100 72-131 (190)
74 2dmi_A Teashirt homolog 3; zin 93.8 0.03 1E-06 39.3 2.4 53 48-100 19-77 (115)
75 2j7j_A Transcription factor II 93.8 0.038 1.3E-06 36.2 2.7 50 49-100 2-58 (85)
76 2gli_A Protein (five-finger GL 93.8 0.054 1.8E-06 39.7 3.8 54 47-100 2-64 (155)
77 2eoe_A Zinc finger protein 347 93.8 0.042 1.4E-06 32.6 2.6 35 47-83 11-46 (46)
78 2csh_A Zinc finger protein 297 93.8 0.053 1.8E-06 37.8 3.5 51 47-100 9-62 (110)
79 2lt7_A Transcriptional regulat 93.7 0.029 9.8E-07 42.4 2.2 49 47-97 21-72 (133)
80 2en6_A Zinc finger protein 268 93.7 0.03 1E-06 33.3 1.9 35 47-83 11-46 (46)
81 2eme_A Zinc finger protein 473 93.6 0.069 2.4E-06 31.6 3.4 35 47-83 11-46 (46)
82 2em7_A Zinc finger protein 224 93.6 0.07 2.4E-06 31.6 3.4 35 47-83 11-46 (46)
83 2ely_A Zinc finger protein 224 93.5 0.042 1.4E-06 32.8 2.3 35 47-83 11-46 (46)
84 2dmi_A Teashirt homolog 3; zin 93.5 0.02 6.9E-07 40.3 1.0 53 47-101 49-106 (115)
85 2elz_A Zinc finger protein 224 93.5 0.081 2.8E-06 31.4 3.6 35 47-83 11-46 (46)
86 2eoo_A ZFP-95, zinc finger pro 93.4 0.04 1.4E-06 32.9 2.1 35 47-83 11-46 (46)
87 2ysp_A Zinc finger protein 224 93.3 0.051 1.7E-06 32.3 2.5 35 47-83 11-46 (46)
88 2ytm_A Zinc finger protein 28 93.3 0.04 1.4E-06 33.0 2.0 34 48-83 12-46 (46)
89 2emh_A Zinc finger protein 484 93.3 0.051 1.7E-06 32.3 2.5 35 47-83 11-46 (46)
90 2ytg_A ZFP-95, zinc finger pro 93.3 0.066 2.3E-06 31.7 3.0 35 47-83 11-46 (46)
91 2eml_A Zinc finger protein 28 93.3 0.076 2.6E-06 31.5 3.2 35 47-83 11-46 (46)
92 2ep3_A Zinc finger protein 484 93.2 0.079 2.7E-06 31.4 3.2 35 47-83 11-46 (46)
93 2en1_A Zinc finger protein 224 93.2 0.057 1.9E-06 32.0 2.5 34 48-83 12-46 (46)
94 2en8_A Zinc finger protein 224 93.2 0.086 2.9E-06 31.1 3.3 35 47-83 11-46 (46)
95 1ubd_C Protein (YY1 zinc finge 93.2 0.082 2.8E-06 37.3 3.8 52 47-100 33-89 (124)
96 2ep0_A Zinc finger protein 28 93.1 0.082 2.8E-06 31.3 3.2 34 48-83 12-46 (46)
97 2el6_A Zinc finger protein 268 93.1 0.086 2.9E-06 31.3 3.2 35 47-83 11-46 (46)
98 2ytd_A Zinc finger protein 473 93.0 0.079 2.7E-06 31.4 3.0 34 48-83 12-46 (46)
99 2i13_A AART; DNA binding, zinc 93.0 0.048 1.6E-06 41.7 2.4 52 47-100 76-130 (190)
100 2emm_A ZFP-95, zinc finger pro 92.9 0.084 2.9E-06 31.2 3.0 34 48-83 12-46 (46)
101 2jp9_A Wilms tumor 1; DNA bind 92.9 0.059 2E-06 37.6 2.6 47 49-97 37-88 (119)
102 2epr_A POZ-, at HOOK-, and zin 92.8 0.066 2.3E-06 32.3 2.4 36 47-84 11-47 (48)
103 2wbs_A Krueppel-like factor 4; 92.7 0.094 3.2E-06 34.7 3.3 52 47-100 4-62 (89)
104 2epq_A POZ-, at HOOK-, and zin 92.7 0.07 2.4E-06 31.6 2.4 35 47-83 9-44 (45)
105 2emp_A Zinc finger protein 347 92.6 0.072 2.5E-06 31.6 2.4 35 47-83 11-46 (46)
106 2emx_A Zinc finger protein 268 92.6 0.094 3.2E-06 30.8 2.9 35 47-83 9-44 (44)
107 2j7j_A Transcription factor II 92.6 0.067 2.3E-06 34.9 2.4 48 47-99 30-85 (85)
108 2yso_A ZFP-95, zinc finger pro 92.5 0.11 3.7E-06 30.8 3.1 35 47-83 11-46 (46)
109 2ytt_A Zinc finger protein 473 92.4 0.055 1.9E-06 32.2 1.7 34 48-83 12-46 (46)
110 2yu8_A Zinc finger protein 347 92.0 0.075 2.6E-06 31.5 1.9 35 47-83 11-46 (46)
111 2em2_A Zinc finger protein 28 91.9 0.13 4.6E-06 30.4 3.0 35 47-83 11-46 (46)
112 2em8_A Zinc finger protein 224 91.9 0.081 2.8E-06 31.5 2.0 35 47-83 11-46 (46)
113 2lt7_A Transcriptional regulat 91.9 0.063 2.2E-06 40.4 1.8 52 48-101 50-104 (133)
114 2wbs_A Krueppel-like factor 4; 91.8 0.13 4.6E-06 34.0 3.2 49 47-97 34-87 (89)
115 2rpc_A Zinc finger protein ZIC 91.0 0.2 7E-06 36.7 3.8 51 49-101 63-118 (155)
116 1tf6_A Protein (transcription 90.9 0.24 8.2E-06 37.7 4.3 52 47-100 103-161 (190)
117 2l6l_A DNAJ homolog subfamily 90.5 0.051 1.8E-06 42.2 0.1 51 32-95 99-151 (155)
118 2ebt_A Krueppel-like factor 5; 90.4 0.23 7.7E-06 33.5 3.3 51 47-99 44-99 (100)
119 2jp9_A Wilms tumor 1; DNA bind 90.3 0.18 6.1E-06 35.1 2.8 52 47-100 5-63 (119)
120 1vd4_A Transcription initiatio 90.1 0.16 5.4E-06 32.7 2.2 36 47-86 13-48 (62)
121 2ep1_A Zinc finger protein 484 89.3 0.38 1.3E-05 28.2 3.3 33 48-82 12-45 (46)
122 2ysl_A Tripartite motif-contai 89.2 0.084 2.9E-06 35.0 0.3 43 47-89 19-69 (73)
123 3mjh_B Early endosome antigen 89.1 0.26 8.8E-06 30.6 2.5 28 47-74 4-32 (34)
124 1paa_A Yeast transcription fac 89.0 0.3 1E-05 25.6 2.5 27 48-74 2-29 (30)
125 2epa_A Krueppel-like factor 10 89.0 0.33 1.1E-05 31.2 3.2 48 47-96 16-70 (72)
126 2ctu_A Zinc finger protein 483 88.9 0.02 7E-07 36.6 -2.8 45 47-100 17-64 (73)
127 2emg_A Zinc finger protein 484 88.6 0.55 1.9E-05 27.5 3.7 33 48-82 12-45 (46)
128 2em3_A Zinc finger protein 28 88.5 0.32 1.1E-05 28.6 2.6 33 48-82 12-45 (46)
129 2lv2_A Insulinoma-associated p 88.4 0.32 1.1E-05 34.3 3.0 29 48-76 56-85 (85)
130 2eq2_A Zinc finger protein 347 88.2 0.55 1.9E-05 27.5 3.5 34 47-82 11-45 (46)
131 2emi_A Zinc finger protein 484 88.1 0.48 1.6E-05 27.8 3.2 34 47-82 11-45 (46)
132 2eon_A ZFP-95, zinc finger pro 87.7 0.6 2E-05 27.6 3.5 33 48-82 12-45 (46)
133 2enf_A Zinc finger protein 347 87.7 0.61 2.1E-05 27.3 3.5 34 47-82 11-45 (46)
134 2yts_A Zinc finger protein 484 87.4 0.61 2.1E-05 27.2 3.4 34 47-82 11-45 (46)
135 2eq1_A Zinc finger protein 347 87.2 0.68 2.3E-05 27.1 3.5 34 47-82 11-45 (46)
136 2ytp_A Zinc finger protein 484 87.1 0.63 2.1E-05 27.4 3.3 34 47-82 11-45 (46)
137 2eow_A Zinc finger protein 347 87.0 0.47 1.6E-05 27.8 2.7 34 47-82 11-45 (46)
138 2yti_A Zinc finger protein 347 86.8 0.61 2.1E-05 27.3 3.1 33 48-82 12-45 (46)
139 2yth_A Zinc finger protein 224 86.8 0.72 2.5E-05 27.1 3.5 33 48-82 12-45 (46)
140 2ytf_A Zinc finger protein 268 85.9 0.74 2.5E-05 26.9 3.2 33 48-82 12-45 (46)
141 2emj_A Zinc finger protein 28 85.9 0.52 1.8E-05 27.8 2.5 33 48-82 12-45 (46)
142 2adr_A ADR1; transcription reg 85.8 0.68 2.3E-05 28.5 3.1 28 48-75 30-58 (60)
143 2en9_A Zinc finger protein 28 85.4 0.73 2.5E-05 27.1 3.0 34 47-82 11-45 (46)
144 2yrj_A Zinc finger protein 473 84.8 0.89 3.1E-05 26.5 3.2 34 47-82 11-45 (46)
145 2el5_A Zinc finger protein 268 84.8 0.89 3E-05 26.0 3.1 32 48-81 10-42 (42)
146 1wir_A Protein arginine N-meth 84.6 0.59 2E-05 36.2 2.9 32 47-78 14-46 (121)
147 2eoy_A Zinc finger protein 473 84.6 0.8 2.7E-05 26.9 2.9 34 48-82 12-46 (46)
148 1t1h_A Gspef-atpub14, armadill 84.5 0.18 6.1E-06 34.0 -0.1 41 47-88 7-54 (78)
149 2em4_A Zinc finger protein 28 84.3 0.81 2.8E-05 26.8 2.9 33 48-82 12-45 (46)
150 2ct1_A Transcriptional repress 83.9 0.69 2.3E-05 30.1 2.6 28 48-75 45-73 (77)
151 1klr_A Zinc finger Y-chromosom 83.9 0.69 2.4E-05 23.8 2.2 24 48-71 2-26 (30)
152 2em6_A Zinc finger protein 224 83.8 1.2 4.2E-05 26.0 3.5 33 48-82 12-45 (46)
153 2kr4_A Ubiquitin conjugation f 83.7 0.59 2E-05 32.8 2.3 35 47-88 13-59 (85)
154 2yrm_A B-cell lymphoma 6 prote 83.7 1.1 3.7E-05 26.0 3.2 34 47-82 9-43 (43)
155 3ztg_A E3 ubiquitin-protein li 83.5 0.055 1.9E-06 37.7 -3.1 41 47-87 12-60 (92)
156 1x6h_A Transcriptional repress 83.3 1.1 3.7E-05 29.2 3.4 36 48-85 47-83 (86)
157 1wii_A Hypothetical UPF0222 pr 83.3 0.23 7.8E-06 36.4 -0.0 35 47-86 22-56 (85)
158 2eor_A Zinc finger protein 224 83.2 0.75 2.6E-05 26.8 2.3 34 47-82 11-45 (46)
159 2egp_A Tripartite motif-contai 83.2 0.4 1.4E-05 32.0 1.2 43 47-89 11-65 (79)
160 2eof_A Zinc finger protein 268 83.2 1.1 3.8E-05 25.7 3.1 32 48-81 12-44 (44)
161 1zw8_A Zinc-responsive transcr 82.9 1.4 4.6E-05 29.5 3.8 46 54-99 9-64 (64)
162 2epu_A Zinc finger protein 32; 82.0 0.89 3.1E-05 26.5 2.3 33 48-82 12-45 (45)
163 2ent_A Krueppel-like factor 15 81.9 1.6 5.6E-05 25.4 3.5 35 47-83 11-48 (48)
164 2dlk_A Novel protein; ZF-C2H2 81.8 0.89 3.1E-05 29.3 2.5 37 47-85 37-76 (79)
165 1e4u_A Transcriptional repress 81.4 0.4 1.4E-05 33.6 0.7 42 47-89 10-62 (78)
166 3iuf_A Zinc finger protein UBI 81.4 1 3.4E-05 27.3 2.5 30 48-77 7-37 (48)
167 2elu_A Zinc finger protein 406 81.2 0.65 2.2E-05 29.1 1.5 25 49-73 10-35 (37)
168 2en7_A Zinc finger protein 268 81.2 1.7 5.9E-05 24.8 3.4 32 48-81 12-44 (44)
169 1wgm_A Ubiquitin conjugation f 81.1 1.3 4.5E-05 32.1 3.4 35 47-88 21-68 (98)
170 2eom_A ZFP-95, zinc finger pro 81.0 1.3 4.3E-05 26.0 2.8 33 48-82 12-45 (46)
171 2elp_A Zinc finger protein 406 80.9 0.65 2.2E-05 25.8 1.4 23 47-69 8-32 (37)
172 2ecv_A Tripartite motif-contai 80.8 0.21 7.2E-06 33.5 -0.9 43 47-89 18-71 (85)
173 1ard_A Yeast transcription fac 80.5 1.2 4.2E-05 22.8 2.4 22 48-69 2-24 (29)
174 2yte_A Zinc finger protein 473 80.3 2.1 7.3E-05 24.2 3.6 31 48-80 10-41 (42)
175 2enh_A Zinc finger protein 28 80.3 1.9 6.3E-05 25.2 3.4 32 48-81 12-44 (46)
176 2kre_A Ubiquitin conjugation f 80.2 1.2 4E-05 32.4 2.9 35 47-88 28-74 (100)
177 2ecw_A Tripartite motif-contai 80.2 1.9 6.5E-05 28.6 3.8 43 47-89 18-71 (85)
178 3hcs_A TNF receptor-associated 80.1 1.1 3.7E-05 34.6 2.8 45 49-96 83-130 (170)
179 2eoz_A Zinc finger protein 473 80.0 0.99 3.4E-05 26.5 2.1 33 48-82 12-45 (46)
180 2ysj_A Tripartite motif-contai 79.9 0.28 9.4E-06 31.8 -0.6 13 47-59 19-31 (63)
181 2m0f_A Zinc finger and BTB dom 79.5 1.1 3.8E-05 22.9 1.9 22 48-69 2-24 (29)
182 3uk3_C Zinc finger protein 217 79.5 1 3.5E-05 27.2 2.1 24 48-71 32-56 (57)
183 2d9h_A Zinc finger protein 692 79.2 1.5 5.1E-05 28.4 2.9 30 47-76 37-67 (78)
184 1znf_A 31ST zinc finger from X 79.1 1.8 6.1E-05 21.9 2.7 21 49-69 2-23 (27)
185 1twf_L ABC10-alpha, DNA-direct 78.9 0.66 2.3E-05 32.7 1.1 29 47-87 27-55 (70)
186 2eoh_A Zinc finger protein 28 78.8 2 6.9E-05 25.0 3.2 32 48-81 12-44 (46)
187 2drp_A Protein (tramtrack DNA- 78.7 1.2 4E-05 27.9 2.2 26 47-72 39-65 (66)
188 2ecj_A Tripartite motif-contai 78.7 0.64 2.2E-05 29.2 0.9 14 47-60 14-27 (58)
189 2emz_A ZFP-95, zinc finger pro 78.2 1.1 3.7E-05 26.3 1.8 33 48-82 12-45 (46)
190 2m0d_A Zinc finger and BTB dom 78.2 1.5 5E-05 22.4 2.2 22 48-69 3-25 (30)
191 2csy_A Zinc finger protein 183 78.1 0.23 7.9E-06 33.8 -1.4 40 47-88 14-60 (81)
192 2yto_A Zinc finger protein 484 78.1 1.6 5.5E-05 25.5 2.6 32 48-81 12-44 (46)
193 1p7a_A BF3, BKLF, kruppel-like 78.0 2 6.7E-05 23.6 2.8 22 48-69 11-33 (37)
194 2els_A Zinc finger protein 406 77.8 1.3 4.4E-05 24.4 2.0 23 47-69 8-31 (36)
195 2ect_A Ring finger protein 126 77.8 0.53 1.8E-05 31.6 0.4 42 47-88 14-63 (78)
196 2elx_A Zinc finger protein 406 77.2 1.6 5.5E-05 23.5 2.3 22 48-69 7-29 (35)
197 2kvh_A Zinc finger and BTB dom 77.2 1.5 5.2E-05 22.4 2.1 22 48-69 3-25 (27)
198 2emb_A Zinc finger protein 473 76.9 2.7 9.4E-05 24.1 3.4 32 48-81 12-44 (44)
199 1srk_A Zinc finger protein ZFP 76.5 2 6.8E-05 23.3 2.5 23 47-69 6-29 (35)
200 2m0e_A Zinc finger and BTB dom 76.4 1.2 4.2E-05 22.6 1.6 22 48-69 2-24 (29)
201 1wim_A KIAA0161 protein; ring 76.4 0.33 1.1E-05 34.2 -1.1 49 47-95 4-72 (94)
202 2ct2_A Tripartite motif protei 76.2 1.9 6.4E-05 29.1 2.8 43 47-89 14-68 (88)
203 1rik_A E6APC1 peptide; E6-bind 76.0 1.3 4.3E-05 22.8 1.5 22 48-69 2-24 (29)
204 2elm_A Zinc finger protein 406 76.0 1.9 6.5E-05 24.1 2.4 25 48-72 9-34 (37)
205 2eq3_A Zinc finger protein 347 75.6 2.1 7E-05 24.8 2.6 32 48-81 12-44 (46)
206 2ct5_A Zinc finger BED domain 75.5 0.86 2.9E-05 32.3 0.9 29 76-104 28-61 (73)
207 3fl2_A E3 ubiquitin-protein li 75.0 0.26 9E-06 36.3 -2.0 41 47-88 51-98 (124)
208 3pwf_A Rubrerythrin; non heme 74.8 1.7 6E-05 34.7 2.7 26 47-86 137-162 (170)
209 2yur_A Retinoblastoma-binding 74.8 0.33 1.1E-05 32.8 -1.4 40 47-86 14-61 (74)
210 2eoj_A Zinc finger protein 268 74.5 2.2 7.5E-05 24.4 2.5 32 48-81 12-44 (44)
211 2kvf_A Zinc finger and BTB dom 73.9 2.2 7.4E-05 21.8 2.1 22 48-69 3-25 (28)
212 1bor_A Transcription factor PM 72.9 1.1 3.7E-05 28.8 0.9 42 47-88 5-48 (56)
213 1bbo_A Human enhancer-binding 72.9 2.2 7.5E-05 25.7 2.3 25 47-71 28-53 (57)
214 2elq_A Zinc finger protein 406 72.8 2.3 8E-05 23.2 2.2 23 47-69 8-31 (36)
215 2eou_A Zinc finger protein 473 72.7 3.6 0.00012 23.6 3.2 32 47-80 11-43 (44)
216 6rxn_A Rubredoxin; electron tr 72.7 0.97 3.3E-05 29.5 0.6 33 48-85 4-38 (46)
217 2elr_A Zinc finger protein 406 72.7 2.8 9.4E-05 22.7 2.5 23 47-69 8-31 (36)
218 2elo_A Zinc finger protein 406 72.7 1.6 5.6E-05 24.0 1.5 23 48-70 9-32 (37)
219 2f42_A STIP1 homology and U-bo 72.5 2.1 7.3E-05 34.7 2.7 36 47-88 105-152 (179)
220 1x5w_A Zinc finger protein 64, 72.1 1.9 6.6E-05 27.4 2.0 27 48-74 37-64 (70)
221 2elt_A Zinc finger protein 406 72.0 2.3 7.7E-05 23.1 2.0 23 47-69 8-31 (36)
222 2ytb_A Zinc finger protein 32; 71.6 4.3 0.00015 22.8 3.3 24 48-72 11-35 (42)
223 2yu5_A Zinc finger protein 473 71.1 3.1 0.00011 23.8 2.6 24 48-72 12-36 (44)
224 2k5c_A Uncharacterized protein 70.7 1.2 4.1E-05 33.2 0.7 12 47-58 50-61 (95)
225 1rim_A E6APC2 peptide; E6-bind 70.5 2.8 9.6E-05 22.9 2.2 25 48-73 2-27 (33)
226 2elv_A Zinc finger protein 406 70.1 3.8 0.00013 22.3 2.7 22 48-69 9-31 (36)
227 2yuc_A TNF receptor-associated 70.0 1.9 6.5E-05 29.0 1.6 46 48-95 16-63 (76)
228 2lvr_A Zinc finger and BTB dom 72.8 0.93 3.2E-05 23.5 0.0 22 48-69 3-25 (30)
229 2kvg_A Zinc finger and BTB dom 69.6 2 6.7E-05 22.2 1.3 21 48-68 3-24 (27)
230 3jyw_9 60S ribosomal protein L 68.9 1.3 4.5E-05 31.6 0.6 10 47-56 25-34 (72)
231 2d8t_A Dactylidin, ring finger 68.4 1.8 6.3E-05 28.6 1.2 44 47-92 14-64 (71)
232 2ept_A Zinc finger protein 32; 68.3 4 0.00014 23.0 2.6 26 47-73 9-35 (41)
233 2c2l_A CHIP, carboxy terminus 68.1 2.8 9.6E-05 33.7 2.5 36 47-88 207-254 (281)
234 3htk_C E3 SUMO-protein ligase 68.1 0.99 3.4E-05 39.3 -0.2 42 47-88 180-231 (267)
235 2djb_A Polycomb group ring fin 68.1 0.34 1.2E-05 32.3 -2.5 40 47-88 14-61 (72)
236 3j21_i 50S ribosomal protein L 68.1 1.4 4.7E-05 32.3 0.6 10 47-56 34-43 (83)
237 1iym_A EL5; ring-H2 finger, ub 68.1 0.36 1.2E-05 30.2 -2.3 40 48-87 5-53 (55)
238 2lcq_A Putative toxin VAPC6; P 67.6 1.3 4.6E-05 34.4 0.5 28 47-87 131-158 (165)
239 2ecy_A TNF receptor-associated 67.6 0.57 2E-05 30.6 -1.4 42 47-89 14-62 (66)
240 2yuc_A TNF receptor-associated 67.5 4.1 0.00014 27.3 2.9 31 48-81 44-74 (76)
241 2y43_A E3 ubiquitin-protein li 67.2 0.61 2.1E-05 32.9 -1.4 40 47-88 21-68 (99)
242 1vq8_Z 50S ribosomal protein L 67.2 1.5 5.2E-05 31.8 0.7 27 47-86 26-54 (83)
243 3iz5_m 60S ribosomal protein L 67.0 1.5 5.2E-05 32.7 0.7 10 47-56 35-44 (92)
244 2lvt_A Zinc finger and BTB dom 70.1 1.2 4E-05 23.1 0.0 21 48-68 2-23 (29)
245 4a17_Y RPL37A, 60S ribosomal p 66.3 1.7 5.7E-05 33.1 0.8 10 47-56 35-44 (103)
246 2eos_A B-cell lymphoma 6 prote 66.1 4.7 0.00016 22.8 2.6 26 47-73 10-36 (42)
247 2lvu_A Zinc finger and BTB dom 69.5 1.2 4.3E-05 22.6 0.0 21 48-68 2-23 (26)
248 1z6u_A NP95-like ring finger p 66.0 0.58 2E-05 36.3 -1.9 42 47-89 77-125 (150)
249 3izc_m 60S ribosomal protein R 65.8 1.6 5.3E-05 32.6 0.5 10 47-56 35-44 (92)
250 2en2_A B-cell lymphoma 6 prote 65.8 3.8 0.00013 23.1 2.1 25 47-72 10-35 (42)
251 1ffk_W Ribosomal protein L37AE 65.6 1.8 6.1E-05 30.9 0.8 13 47-59 26-39 (73)
252 2kiz_A E3 ubiquitin-protein li 65.5 0.26 8.8E-06 32.4 -3.5 43 47-89 13-63 (69)
253 2ckl_A Polycomb group ring fin 65.3 0.92 3.1E-05 32.5 -0.8 40 47-88 14-61 (108)
254 2l7x_A Envelope glycoprotein; 64.9 2.3 7.8E-05 30.7 1.2 21 48-68 30-50 (77)
255 2i5o_A DNA polymerase ETA; zin 64.1 2.7 9.2E-05 26.6 1.3 22 47-68 8-29 (39)
256 2epv_A Zinc finger protein 268 64.1 5 0.00017 23.1 2.5 24 48-72 12-36 (44)
257 1njq_A Superman protein; zinc- 63.8 4.9 0.00017 22.4 2.4 25 48-73 6-31 (39)
258 1x6e_A Zinc finger protein 24; 63.8 3.5 0.00012 26.3 1.9 25 47-71 41-66 (72)
259 2ghf_A ZHX1, zinc fingers and 63.2 2.8 9.6E-05 30.3 1.5 38 47-85 49-87 (102)
260 3l11_A E3 ubiquitin-protein li 62.5 1.7 5.7E-05 31.4 0.1 41 47-88 14-61 (115)
261 1jm7_A BRCA1, breast cancer ty 62.4 0.77 2.6E-05 32.6 -1.7 43 47-89 20-70 (112)
262 2e72_A POGO transposable eleme 62.3 4.6 0.00016 27.0 2.2 21 48-68 12-33 (49)
263 3cc2_Z 50S ribosomal protein L 62.1 2.1 7.3E-05 33.1 0.7 29 47-87 59-88 (116)
264 2epc_A Zinc finger protein 32; 62.0 5.4 0.00019 22.3 2.3 26 47-73 10-36 (42)
265 2ep4_A Ring finger protein 24; 61.8 0.77 2.6E-05 30.5 -1.7 42 47-88 14-63 (74)
266 1jm7_B BARD1, BRCA1-associated 61.4 1 3.5E-05 32.8 -1.2 42 47-88 21-66 (117)
267 3lrq_A E3 ubiquitin-protein li 61.3 0.62 2.1E-05 33.3 -2.4 41 47-88 21-69 (100)
268 2gqj_A Zinc finger protein KIA 61.0 4 0.00014 28.0 1.9 27 47-73 53-80 (98)
269 2ea5_A Cell growth regulator w 60.9 0.86 3E-05 30.8 -1.6 41 47-88 14-57 (68)
270 2xeu_A Ring finger protein 4; 60.4 0.77 2.6E-05 29.2 -1.8 43 47-89 2-56 (64)
271 1lko_A Rubrerythrin all-iron(I 60.2 1.7 5.9E-05 35.0 -0.2 26 47-85 154-179 (191)
272 2ea6_A Ring finger protein 4; 60.1 1.1 3.8E-05 28.8 -1.1 15 47-61 14-28 (69)
273 2en3_A ZFP-95, zinc finger pro 59.9 4.2 0.00014 23.5 1.6 32 48-81 12-44 (46)
274 2cot_A Zinc finger protein 435 59.5 7.4 0.00025 25.0 2.9 25 48-73 46-71 (77)
275 1yui_A GAGA-factor; complex (D 59.3 5.7 0.0002 24.0 2.2 23 47-69 23-46 (54)
276 4gzn_C ZFP-57, zinc finger pro 58.4 7.7 0.00026 25.3 2.9 27 48-75 32-59 (60)
277 2jvx_A NF-kappa-B essential mo 57.9 5.9 0.0002 23.4 2.0 23 47-69 2-25 (28)
278 2l0b_A E3 ubiquitin-protein li 57.9 0.85 2.9E-05 32.0 -2.1 42 47-88 39-88 (91)
279 3mkr_B Coatomer subunit alpha; 57.9 3 0.0001 37.1 0.9 35 45-92 275-310 (320)
280 2epp_A POZ-, at HOOK-, and zin 57.2 8.8 0.0003 25.8 3.1 36 47-85 12-48 (66)
281 3mv2_A Coatomer subunit alpha; 56.2 3.1 0.00011 37.1 0.8 35 44-91 283-318 (325)
282 2kfq_A FP1; protein, de novo p 56.2 3.7 0.00013 22.2 0.8 20 49-68 3-23 (32)
283 3ng2_A RNF4, snurf, ring finge 55.8 0.72 2.4E-05 30.1 -2.6 41 47-89 9-63 (71)
284 1v87_A Deltex protein 2; ring- 52.9 0.55 1.9E-05 33.7 -3.9 13 76-88 81-93 (114)
285 2ctd_A Zinc finger protein 512 52.8 10 0.00035 26.4 2.9 26 48-73 62-88 (96)
286 4ic3_A E3 ubiquitin-protein li 52.6 2.4 8.2E-05 28.6 -0.5 41 47-88 23-66 (74)
287 1sp2_A SP1F2; zinc finger, tra 52.4 13 0.00043 19.3 2.7 22 48-69 2-26 (31)
288 1yuz_A Nigerythrin; rubrythrin 51.8 5.2 0.00018 32.7 1.4 26 47-86 170-195 (202)
289 3flo_B DNA polymerase alpha ca 50.9 1.9 6.6E-05 35.9 -1.4 39 47-88 21-60 (206)
290 2eox_A Zinc finger protein 473 50.1 4.8 0.00016 23.0 0.7 23 47-69 11-34 (44)
291 3sp4_A Aprataxin-like protein; 49.8 7.9 0.00027 32.2 2.2 24 47-70 168-193 (204)
292 2wbt_A B-129; zinc finger; 2.7 49.3 12 0.0004 26.3 2.8 26 48-73 100-126 (129)
293 2jne_A Hypothetical protein YF 47.5 1.3 4.4E-05 33.6 -2.7 54 49-106 33-93 (101)
294 2ckl_B Ubiquitin ligase protei 47.2 1 3.4E-05 34.7 -3.5 41 47-88 53-101 (165)
295 2kdx_A HYPA, hydrogenase/ureas 47.0 7.2 0.00024 29.0 1.4 27 47-86 72-99 (119)
296 4ayc_A E3 ubiquitin-protein li 46.7 1.1 3.8E-05 33.6 -3.2 40 47-88 52-98 (138)
297 1e8j_A Rubredoxin; iron-sulfur 46.2 8.1 0.00028 25.5 1.4 10 47-56 35-44 (52)
298 2k5c_A Uncharacterized protein 45.5 7.8 0.00027 28.8 1.3 38 49-86 9-60 (95)
299 3vhs_A ATPase wrnip1; zinc fin 45.1 7.7 0.00026 23.0 1.0 19 77-95 6-25 (29)
300 1va1_A Transcription factor SP 44.9 15 0.0005 20.2 2.2 23 47-69 7-32 (37)
301 1l8d_A DNA double-strand break 44.0 6 0.00021 28.6 0.5 12 49-60 48-59 (112)
302 2ecm_A Ring finger and CHY zin 43.8 17 0.00057 22.1 2.6 13 47-59 4-16 (55)
303 2czr_A TBP-interacting protein 43.6 7.7 0.00026 32.7 1.2 25 43-69 151-175 (226)
304 1zfd_A SWI5; DNA binding motif 42.8 17 0.00059 18.8 2.3 22 48-69 3-27 (32)
305 2eln_A Zinc finger protein 406 42.6 14 0.00047 22.0 1.9 22 48-69 9-33 (38)
306 4ap4_A E3 ubiquitin ligase RNF 42.3 6.3 0.00022 28.1 0.4 36 47-87 47-82 (133)
307 3h0g_L DNA-directed RNA polyme 42.1 11 0.00037 26.1 1.6 29 47-87 20-48 (63)
308 2ecg_A Baculoviral IAP repeat- 42.1 3.3 0.00011 27.8 -1.1 42 47-89 24-68 (75)
309 1fv5_A First zinc finger of U- 41.4 12 0.0004 22.3 1.5 21 47-67 7-28 (36)
310 2qgp_A HNH endonuclease; Q39X4 40.7 3.9 0.00013 30.3 -0.9 14 47-60 34-47 (112)
311 1rmd_A RAG1; V(D)J recombinati 40.6 3.1 0.0001 30.0 -1.5 44 43-89 20-70 (116)
312 1bhi_A CRE-BP1, ATF-2; CRE bin 40.5 19 0.00065 19.5 2.2 22 48-69 6-30 (38)
313 2ab3_A ZNF29; zinc finger prot 40.5 14 0.00048 18.4 1.6 22 48-69 2-26 (29)
314 2ecn_A Ring finger protein 141 39.9 3.8 0.00013 26.7 -1.0 40 47-88 14-59 (70)
315 3hct_A TNF receptor-associated 39.6 3.7 0.00013 29.8 -1.2 42 47-89 17-65 (118)
316 4a0k_B E3 ubiquitin-protein li 39.0 6.4 0.00022 29.7 0.0 37 50-86 50-109 (117)
317 1x3c_A Zinc finger protein 292 38.1 24 0.00083 25.1 2.9 28 48-75 27-57 (73)
318 1pft_A TFIIB, PFTFIIBN; N-term 37.9 5.5 0.00019 25.3 -0.5 35 47-92 4-39 (50)
319 1yk4_A Rubredoxin, RD; electro 36.0 13 0.00044 24.5 1.1 12 43-56 32-43 (52)
320 1x4j_A Ring finger protein 38; 35.4 1.7 5.8E-05 28.9 -3.4 41 48-88 23-71 (75)
321 2akl_A PHNA-like protein PA012 34.6 12 0.00042 29.7 1.0 27 48-86 27-53 (138)
322 3t6p_A Baculoviral IAP repeat- 34.3 5.3 0.00018 35.3 -1.3 41 47-88 294-337 (345)
323 2v3b_B Rubredoxin 2, rubredoxi 34.2 13 0.00046 24.7 1.0 12 43-56 33-44 (55)
324 2jr6_A UPF0434 protein NMA0874 33.3 10 0.00036 26.2 0.4 28 47-85 7-34 (68)
325 4ayb_P DNA-directed RNA polyme 33.2 8.9 0.00031 25.5 -0.0 31 48-87 3-33 (48)
326 2hf1_A Tetraacyldisaccharide-1 33.2 11 0.00036 26.2 0.4 28 47-85 7-34 (68)
327 2a25_A Ubiquitin ligase SIAH1; 32.9 15 0.0005 29.5 1.2 50 48-100 6-64 (193)
328 2djr_A Zinc finger BED domain- 31.6 16 0.00056 25.8 1.2 16 89-104 49-64 (76)
329 2yho_A E3 ubiquitin-protein li 31.4 3.4 0.00012 28.5 -2.5 42 47-89 17-61 (79)
330 2jny_A Uncharacterized BCR; st 31.1 17 0.00058 25.2 1.1 30 43-85 7-36 (67)
331 1dx8_A Rubredoxin; electron tr 31.1 17 0.00057 25.4 1.1 12 43-56 37-48 (70)
332 2pk7_A Uncharacterized protein 30.6 12 0.00042 25.9 0.4 28 47-85 7-34 (69)
333 2js4_A UPF0434 protein BB2007; 30.4 12 0.0004 26.1 0.2 28 47-85 7-34 (70)
334 4rxn_A Rubredoxin; electron tr 29.7 19 0.00064 24.1 1.1 11 47-57 35-45 (54)
335 2kn9_A Rubredoxin; metalloprot 29.5 16 0.00056 26.3 0.9 10 47-56 59-68 (81)
336 4dvc_A Thiol:disulfide interch 29.1 5.7 0.0002 29.3 -1.7 10 47-56 29-38 (184)
337 3dpl_R Ring-box protein 1; ubi 29.0 3.2 0.00011 30.6 -3.1 10 77-86 89-98 (106)
338 3mwm_A ZUR, putative metal upt 28.4 25 0.00084 26.4 1.7 41 46-86 85-136 (139)
339 1x6f_A Zinc finger protein 462 27.8 32 0.0011 23.7 2.1 52 47-102 24-76 (88)
340 2ecl_A Ring-box protein 2; RNF 27.4 3.5 0.00012 28.3 -3.0 10 78-87 65-74 (81)
341 1ncs_A Peptide M30F, transcrip 26.9 22 0.00077 20.7 1.0 23 47-69 17-42 (47)
342 2bai_A Genome polyprotein; zin 26.7 8.2 0.00028 23.6 -1.0 9 78-86 17-25 (32)
343 3eyy_A Putative iron uptake re 26.6 18 0.00062 27.3 0.7 41 46-86 88-139 (145)
344 1dl6_A Transcription factor II 26.6 14 0.00048 24.6 0.0 35 48-93 11-46 (58)
345 1s24_A Rubredoxin 2; electron 25.7 22 0.00074 26.0 0.9 12 43-56 65-76 (87)
346 3gn3_A Putative protein-disulf 25.6 6.2 0.00021 30.9 -2.2 20 47-66 22-42 (182)
347 2znm_A Thiol:disulfide interch 25.6 21 0.00073 26.8 0.9 18 47-64 30-48 (195)
348 3al0_B Aspartyl/glutamyl-tRNA( 25.5 18 0.00062 33.7 0.6 16 73-88 32-47 (482)
349 2jvm_A Uncharacterized protein 25.1 19 0.00065 26.1 0.5 14 48-61 53-66 (80)
350 3h0l_B Aspartyl/glutamyl-tRNA( 25.1 19 0.00063 33.6 0.6 18 71-88 31-48 (478)
351 2jz8_A Uncharacterized protein 24.8 20 0.00069 26.4 0.6 12 48-59 48-59 (87)
352 4ets_A Ferric uptake regulatio 24.5 26 0.0009 27.1 1.3 41 46-86 105-156 (162)
353 2o03_A Probable zinc uptake re 24.3 49 0.0017 24.2 2.7 39 46-84 81-130 (131)
354 1nui_A DNA primase/helicase; z 24.0 22 0.00077 28.9 0.8 11 47-57 13-23 (255)
355 2yu4_A E3 SUMO-protein ligase 23.2 54 0.0019 22.8 2.7 32 54-86 26-59 (94)
356 3ip4_B Aspartyl/glutamyl-tRNA( 23.2 21 0.00071 33.3 0.5 17 72-88 30-46 (483)
357 1wir_A Protein arginine N-meth 23.1 38 0.0013 25.9 1.9 30 74-103 12-43 (121)
358 3a43_A HYPD, hydrogenase nicke 23.1 18 0.00062 27.8 0.1 16 47-62 69-84 (139)
359 3vk6_A E3 ubiquitin-protein li 23.0 72 0.0025 23.9 3.4 32 47-78 57-92 (101)
360 1chc_A Equine herpes virus-1 r 22.8 6.5 0.00022 25.2 -2.2 41 48-88 5-51 (68)
361 2xig_A Ferric uptake regulatio 22.6 21 0.00073 27.1 0.4 41 46-86 97-148 (150)
362 3noy_A 4-hydroxy-3-methylbut-2 22.3 49 0.0017 29.9 2.8 24 47-70 270-294 (366)
363 2ct7_A Ring finger protein 31; 22.0 77 0.0026 21.9 3.2 25 50-85 27-51 (86)
364 3mhs_C SAGA-associated factor 21.5 31 0.0011 25.9 1.1 23 47-69 69-91 (99)
365 2gmg_A Hypothetical protein PF 21.4 52 0.0018 24.8 2.4 28 47-86 66-93 (105)
366 2jrr_A Uncharacterized protein 21.2 26 0.00088 24.5 0.6 11 48-58 40-50 (67)
367 3kfu_F Aspartyl/glutamyl-tRNA( 20.4 26 0.0009 32.6 0.6 17 72-88 30-46 (466)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.60 E-value=4.7e-05 Score=49.23 Aligned_cols=54 Identities=28% Similarity=0.604 Sum_probs=44.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|+.|+..| ....|..|....|....+.-.|++|...-. .++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 469999999955 578899999998876677889999977543 589999988886
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.52 E-value=7.6e-05 Score=49.92 Aligned_cols=54 Identities=26% Similarity=0.415 Sum_probs=45.2
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
.|.|++|+. =.....|..|+...|..+.+.-.|++|...-. .+|..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 599999999 55678999999988987777889999987543 5899999888865
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.15 E-value=0.00026 Score=44.21 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=38.6
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+. --....|..|+.. |.. .+...|++|...-. .++..|+...|+
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CCccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 4699999999 5567889999886 433 45689999977533 589999988775
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.95 E-value=0.00084 Score=45.74 Aligned_cols=51 Identities=31% Similarity=0.541 Sum_probs=28.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...|+
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 46677776633 45566666654 322 23456777655322 466666665554
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.86 E-value=0.00077 Score=44.08 Aligned_cols=53 Identities=21% Similarity=0.342 Sum_probs=41.1
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+.. -....|..|+.. |..+ +.-.|++|...-. .+|..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCTD-RPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCCS-CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCCC-CCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 46999999994 467889999976 6443 5589999977543 5899999877764
No 6
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.84 E-value=0.0011 Score=44.30 Aligned_cols=55 Identities=24% Similarity=0.337 Sum_probs=43.2
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCC--CCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVE--AKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e--~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+. -.....|..|+...|... .+...|++|...-. .+|..|+...|+.
T Consensus 14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 3599999999 556778999998888654 36689999977543 6899999877765
No 7
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.78 E-value=0.001 Score=43.40 Aligned_cols=48 Identities=21% Similarity=0.518 Sum_probs=39.1
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccc-ccccCc--ccchHhhhhc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCP-VCVTRV--TMDMVDHITT 97 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCP-ICa~~~--~~d~v~Hl~~ 97 (191)
-.|.|++|++.|....|..|... ...+...|+ +|...- ..+|..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 46999999998778899999886 556789999 997752 2589999864
No 8
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.74 E-value=0.0017 Score=40.33 Aligned_cols=50 Identities=20% Similarity=0.352 Sum_probs=38.4
Q ss_pred ecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 49 F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 8999999954 67889999876 543 45678999977543 589999876655
No 9
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.56 E-value=0.0017 Score=42.79 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=39.1
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CCccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 359999999944 67889999875 433 45679999987543 589999876554
No 10
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.53 E-value=0.0026 Score=40.01 Aligned_cols=51 Identities=24% Similarity=0.436 Sum_probs=38.7
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 48999999955 67889999876 543 35678999987543 589999865554
No 11
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.38 E-value=0.0027 Score=45.36 Aligned_cols=51 Identities=22% Similarity=0.416 Sum_probs=39.8
Q ss_pred ceecCCCCCCCc--CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~--D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|+.|++.| ....|..|+.. | ..+.-.|++|...-. .+|..|+...|.
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 369999999988 78999999876 5 457789999987543 589999544453
No 12
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.38 E-value=0.00049 Score=48.53 Aligned_cols=54 Identities=24% Similarity=0.376 Sum_probs=41.8
Q ss_pred ceecCCCCCCCc--CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e~~--D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+..| ....|..|+...|. ..+.-.|++|...-. .+|..|+...|+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 369999999977 57899999976443 245689999987543 5899999877764
No 13
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.35 E-value=0.0042 Score=41.19 Aligned_cols=52 Identities=23% Similarity=0.438 Sum_probs=39.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 469999999955 57889999875 543 35689999987543 589999976654
No 14
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.33 E-value=0.0032 Score=42.86 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=27.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 99 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH 99 (191)
.|.|++|+..| ....|..|+...+ . .+.-.|++|..... .++..|+...+
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~ 60 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRCHT-G-VKPYKCKTCDYAAADSSSLNKHLRIHS 60 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGGCC-C-CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred CeECCCCCCccCCHHHHHHHHHhcC-C-CCCEeCCCCCCccCCHHHHHHHHHHhC
Confidence 46677776643 4555666665433 1 23456666655322 46666665443
No 15
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.24 E-value=0.0043 Score=43.76 Aligned_cols=53 Identities=23% Similarity=0.461 Sum_probs=35.7
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCC-CCCCcccccccccCcc--cchHhhhhcccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHP-VEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~-~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
.|.|++|+. -.....|..|+...|. ...+...|++|...-. .+|..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 488888888 4467778888877543 2345577888866433 477788766554
No 16
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=96.20 E-value=0.0041 Score=44.92 Aligned_cols=51 Identities=33% Similarity=0.675 Sum_probs=40.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~~ 102 (191)
.|.|++|+..| ....|..|+.. | .++-.|++|...-. .++..|+...||..
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence 59999999954 56779999876 5 45579999977543 58999999888753
No 17
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.15 E-value=0.0029 Score=41.59 Aligned_cols=49 Identities=20% Similarity=0.493 Sum_probs=24.8
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQ 98 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~q 98 (191)
.|.|++|+.. -....|..|+...+. .+.-.|++|...-. .++..|+...
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhh
Confidence 3666666663 345556666553321 23455666654322 3555665543
No 18
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.11 E-value=0.0072 Score=41.92 Aligned_cols=52 Identities=21% Similarity=0.442 Sum_probs=37.2
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+..| ....|..|+...+. .+...|++|..... .++..|+...++
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 468999999955 57788888876442 35578999976543 578888876554
No 19
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.10 E-value=0.004 Score=41.76 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=23.5
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 99 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH 99 (191)
.|.|++|+. --....|..|+...+ . .+.-.|++|...-. .+|..|+...+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRTHT-G-EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHH-C-CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHHcC-C-CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 355666655 333455555554322 1 23345666544322 35555554433
No 20
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.06 E-value=0.0067 Score=41.26 Aligned_cols=54 Identities=24% Similarity=0.429 Sum_probs=40.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCc-------ccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKS-------GVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~-------vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|+|+.|+..| ....|..|+...|..+... -.|++|...-. .+|..|+..+++
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 358899999955 6788999998878765321 68999977543 589999876443
No 21
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.03 E-value=0.0025 Score=42.28 Aligned_cols=56 Identities=18% Similarity=0.295 Sum_probs=41.9
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCC-CCCcccccccccCcc--cchHhhhhcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPV-EAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~-e~k~vVCPICa~~~~--~d~v~Hl~~qH~~~ 102 (191)
..|.|++|+..| ....|..|+...+.. ..+.-.|++|...-. .+|..|+...|...
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 469999999954 677899998764432 246689999987543 58999997777654
No 22
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.01 E-value=0.0063 Score=45.05 Aligned_cols=54 Identities=24% Similarity=0.429 Sum_probs=41.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCc-------ccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKS-------GVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~-------vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|+|+.|+..| +...|..|+...|..+... ..|++|..... .+|..|+...++
T Consensus 24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 469999999955 6788999999989876432 57999977543 588999876554
No 23
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.99 E-value=0.0058 Score=40.19 Aligned_cols=52 Identities=23% Similarity=0.450 Sum_probs=39.2
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+..+++
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 469999999955 57789999875 433 35679999987543 589999876554
No 24
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.94 E-value=0.0057 Score=43.10 Aligned_cols=53 Identities=19% Similarity=0.356 Sum_probs=40.8
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+. =-....|..|+...+ . .+.-.|++|...-. .+|..|+...|+.
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVSHT-G-EMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHS-S-SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHHcC-C-CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 4699999999 556788999997644 2 35689999977543 5899999877764
No 25
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.94 E-value=0.0048 Score=41.88 Aligned_cols=55 Identities=20% Similarity=0.385 Sum_probs=43.1
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+. --....|..|+...|....+.-.|++|...-. .+|..|+...|+.
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence 3599999999 55678899999876655457889999987543 5899998766653
No 26
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.93 E-value=0.0075 Score=40.96 Aligned_cols=53 Identities=21% Similarity=0.419 Sum_probs=40.4
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+. -.....|..|+.. |.. .+...|++|...-. .+|..|+...|+.
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3599999999 4567889999976 433 45689999977533 5899999877654
No 27
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.91 E-value=0.0058 Score=42.82 Aligned_cols=53 Identities=23% Similarity=0.356 Sum_probs=28.6
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~~ 102 (191)
.|.|++|+. --....|..|+.. |.. .+.-.|++|...-. .+|..|+...|...
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~ 92 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKSY 92 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHccccc
Confidence 366666666 3344566666553 322 23456666655322 46666666555443
No 28
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.82 E-value=0.0018 Score=44.51 Aligned_cols=48 Identities=21% Similarity=0.341 Sum_probs=39.7
Q ss_pred eecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCcc-cchHhhhhcc
Q 029557 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHITTQ 98 (191)
Q Consensus 48 ~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~-~d~v~Hl~~q 98 (191)
.|.|+||+..|....|-.|. .|+. .+.+.||.|...+. .+|..|+...
T Consensus 17 ~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~c 65 (75)
T 2d9k_A 17 LAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEVC 65 (75)
T ss_dssp CEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHHB
T ss_pred ccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHHc
Confidence 69999999999999999998 5654 56789999977544 6899998653
No 29
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.80 E-value=0.011 Score=40.95 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=39.3
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 359999999954 77899999775 433 35579999987543 589999876654
No 30
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.75 E-value=0.0049 Score=40.46 Aligned_cols=50 Identities=22% Similarity=0.422 Sum_probs=38.3
Q ss_pred ecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 49 YPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 49 F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
|.|+.|+. =-+...|..|+...+ ..+...|++|..... .++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 89999999 446788999998744 345679999987543 589999876554
No 31
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.71 E-value=0.0086 Score=42.68 Aligned_cols=53 Identities=25% Similarity=0.363 Sum_probs=40.8
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.||+|++.| ....|..|+...| . .++-.|++|...-. .+|..|+...|..
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~-~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLH-A-AQVFPCKYCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTS-C-SSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhcc-C-CCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence 469999999955 5678999987644 3 46789999987533 6899998777753
No 32
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.25 E-value=0.019 Score=34.21 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=28.0
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|....|..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 11 KPYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp CSBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CCEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 359999999954 5678899988567654 56789998
No 33
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.07 E-value=0.0096 Score=40.38 Aligned_cols=54 Identities=24% Similarity=0.396 Sum_probs=40.5
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccccch
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNIS 103 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~~~ 103 (191)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|+..+
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 59999999944 67889999876 543 35578999977533 589999988886443
No 34
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.01 E-value=0.029 Score=33.37 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=26.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNSHLARHRGI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHGGG-TSCC-CCCSCCCC
T ss_pred cCeECCCCCCeeCCHHHHHHHhhh-cCCC-CCCCCCCC
Confidence 359999999944 56778899754 6544 66789998
No 35
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.01 E-value=0.023 Score=33.81 Aligned_cols=35 Identities=23% Similarity=0.131 Sum_probs=26.9
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 35999999994 456788899764 6554 56789998
No 36
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=94.93 E-value=0.018 Score=38.41 Aligned_cols=49 Identities=24% Similarity=0.571 Sum_probs=38.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQ 98 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~q 98 (191)
.|.|+.|+..| ....|..|... |.. .++-.|++|...-. .+|..|+.+.
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~H 55 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA-HLG-YRPRSCPECGKCFRDQSEVNRHLKVH 55 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HHT-CCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHHH-hCC-CcCeECCCCCCCcCCHHHHHHHhCcc
Confidence 59999999965 56789999864 754 46689999977533 6899998764
No 37
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=94.90 E-value=0.0024 Score=43.43 Aligned_cols=52 Identities=12% Similarity=0.184 Sum_probs=41.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~~ 102 (191)
.|.|++|+..| ....|..|....|. ...+|++|..... .+|..||...|+..
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~~ 85 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKLV 85 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 59999999944 67899999999883 6789999977543 58999998777653
No 38
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=94.90 E-value=0.0081 Score=44.10 Aligned_cols=47 Identities=28% Similarity=0.634 Sum_probs=33.1
Q ss_pred CCCCCCCcchhhhccCcceecCCCCCC--CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 30 ~g~e~~e~d~d~e~~~~~~F~CPfC~e--~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
+.+||++-+++++.+ .|+|| ||. .+....|... .-.|.||-|+-.+.
T Consensus 15 v~LeDm~~de~~~~y---~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 15 VEIEDFQYDEDSETY---FYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EEGGGSCCBTTTTEE---EECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EEHHHceEccCCCEE---EEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 456777776654344 89999 999 6777777531 13688999998664
No 39
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.85 E-value=0.03 Score=33.19 Aligned_cols=35 Identities=14% Similarity=0.022 Sum_probs=26.7
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 11 KPHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CCeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 35999999994 456788999765 654 356789998
No 40
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=94.85 E-value=0.0079 Score=44.78 Aligned_cols=47 Identities=28% Similarity=0.639 Sum_probs=33.6
Q ss_pred CCCCCCCcchhhhccCcceecCCCCCC--CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 30 ~g~e~~e~d~d~e~~~~~~F~CPfC~e--~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
+.++|++-|++++.+ +|+|| ||. .++...|... .-.|.||-|+-.+.
T Consensus 8 V~LeDm~~de~~~~y---~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 8 VEIEDFQYDEDSETY---FYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp EETTTSEEETTTTEE---EEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred EEHHHcEEcCCCCEE---EEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 456777766554344 89999 999 7777788532 13688999998764
No 41
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.84 E-value=0.02 Score=37.55 Aligned_cols=53 Identities=26% Similarity=0.480 Sum_probs=40.2
Q ss_pred ceecCCC--CCCCc-CHHHHHhhhhhcCCCCCCcccccc--cccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPf--C~e~~-D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++ |+..| ....|..|+...|..+ +.-.|++ |...-. .+|..|+...++
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~-~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ-KSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGSC-CCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCCC-CCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 3588888 99944 6788999998777654 5679998 977533 589999876544
No 42
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=94.84 E-value=0.03 Score=33.34 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=26.7
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 11 KTWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred cCeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 35999999994 456788999865 644 356789998
No 43
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.82 E-value=0.026 Score=39.96 Aligned_cols=51 Identities=24% Similarity=0.491 Sum_probs=36.7
Q ss_pred ceecCC--CCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCP--FCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CP--fC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|| .|+..| +...|..|+. .| ..+.-.|++|...-. .++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred CcccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 368898 799944 6778889986 45 556678999976533 578888876554
No 44
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.81 E-value=0.018 Score=40.32 Aligned_cols=45 Identities=24% Similarity=0.502 Sum_probs=32.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHIT 96 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~ 96 (191)
.|.|++|+..| ....|..|+.. | .+.-.|++|..... .+|..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 58899998844 56778888876 4 25678888876543 57888874
No 45
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=94.78 E-value=0.024 Score=33.78 Aligned_cols=35 Identities=23% Similarity=0.186 Sum_probs=26.8
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ema_A 11 KRYKCNECGKVFSRNSQLSQHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTG-GGCC-CCCSSSCC
T ss_pred cCcCCCCCcchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 35999999995 466788899765 5543 56789998
No 46
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=94.61 E-value=0.032 Score=37.88 Aligned_cols=52 Identities=19% Similarity=0.321 Sum_probs=36.1
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCccccc--ccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCP--ICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++ |+. --....|..|+...+ . .+...|| +|...-. .+|..|+...++
T Consensus 14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHT-G-EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CCEECCSSSCCCEESCHHHHHHHHHHHS-C-CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred cceEcCCCCCCCcccCHHHHHHHHHHhC-C-CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 4689998 999 446788889987643 2 3457887 5866432 578888876554
No 47
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.56 E-value=0.033 Score=33.15 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=26.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ene_A 11 KPYKCNECGKVFRHNSYLSRHQRI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SSEECSSSCCEESSHHHHHHHHTT-TCCC-CCCSCCCC
T ss_pred CCeECCCCCchhCChHHHHHHHhh-cCCC-CCCCCCCC
Confidence 359999999954 56788999775 6543 56789998
No 48
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.52 E-value=0.038 Score=32.86 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=26.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2eoq_A 11 KPFKCDICGKSFCGRSRLNRHSMV-HTAE-KPSGPSSG 46 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHHHHH-TTCC-CSSSCCCC
T ss_pred CCcCCCcCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 359999999955 66788899764 6544 56789998
No 49
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.50 E-value=0.016 Score=42.51 Aligned_cols=52 Identities=25% Similarity=0.439 Sum_probs=37.8
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCcccccc--cccCc--ccchHhhhhcccc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPV--CVTRV--TMDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~--~~d~v~Hl~~qH~ 100 (191)
..|.|++ |+. =.....|..|+.. |.. .+.-.|++ |...- ..+|..|+...|.
T Consensus 66 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 66 KPHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CCccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 3599997 999 4567789999976 433 35678998 97653 3689999855554
No 50
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=94.45 E-value=0.021 Score=38.12 Aligned_cols=52 Identities=29% Similarity=0.590 Sum_probs=38.5
Q ss_pred ceecCCC--CCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPf--C~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.||+ |+..| ....|..|+...+. .+.-.|++|..... .++..|+...++
T Consensus 3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 3 RPYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 3699995 99954 67789999885442 35679999977543 589999876554
No 51
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.42 E-value=0.037 Score=34.55 Aligned_cols=39 Identities=31% Similarity=0.524 Sum_probs=30.9
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|.|++|+..| ....|..|+...|..+ +.-.|++|...
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~-k~~~C~~C~k~ 50 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSE-RPHKCQVWVSG 50 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCCC-CCCCSSSSCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC-CCccCCCCCCC
Confidence 369999999954 6788999998778654 56789999654
No 52
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.40 E-value=0.037 Score=32.91 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=26.8
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+. =-....|..|.. .|..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2ep2_A 11 KPYECSICGKSFTKKSQLHVHQQ-IHTGE-KPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH-TTSSC-CSCCSCCC
T ss_pred cCcCCCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 3599999999 456678999986 46544 56789998
No 53
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.39 E-value=0.036 Score=33.05 Aligned_cols=35 Identities=17% Similarity=0.027 Sum_probs=26.8
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 11 KSHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CCeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 35999999994 467889999755 644 356789998
No 54
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.33 E-value=0.045 Score=32.60 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=26.5
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+. =-....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4466889999765 654 356789998
No 55
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.31 E-value=0.03 Score=41.05 Aligned_cols=51 Identities=31% Similarity=0.538 Sum_probs=38.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCC--CCCCcccccccccCc--ccchHhh-hhc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHP--VEAKSGVCPVCVTRV--TMDMVDH-ITT 97 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~--~e~k~vVCPICa~~~--~~d~v~H-l~~ 97 (191)
..|.|++|+..| ....|..|+...|. ...+.-.|++|...- ..+|..| +..
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~ 73 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT
T ss_pred cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence 459999999955 57789999987785 345678999997743 3588899 443
No 56
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.29 E-value=0.03 Score=33.33 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=26.7
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+. =-....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 11 NPYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred cCcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 3599999999 4456788999766 544 356789998
No 57
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=94.27 E-value=0.028 Score=36.48 Aligned_cols=49 Identities=29% Similarity=0.496 Sum_probs=35.9
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~ 97 (191)
..|.||+ |+. --....|..|+.. |.. .+.-.|++|...-. .++..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 3699996 999 4467789999765 443 35579999977543 588888754
No 58
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.26 E-value=0.024 Score=39.61 Aligned_cols=50 Identities=22% Similarity=0.329 Sum_probs=38.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
.|.|++|+..| ....|..|+. |.. .+.-.|++|...-. .+|..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 59999999944 6788999984 654 45689999977543 589999875564
No 59
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.23 E-value=0.027 Score=43.05 Aligned_cols=51 Identities=27% Similarity=0.494 Sum_probs=35.4
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
.|.|++|+. =-....|..|+...+. .+.-.|++|...-. .++..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 588888888 4456778888876442 34567888876433 578888876554
No 60
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.17 E-value=0.036 Score=32.84 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=26.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK-CHTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH-HHSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999954 5688999975 46543 56789998
No 61
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=94.13 E-value=0.045 Score=32.39 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=26.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 11 KPYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred cCeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 359999999954 56889999765 554 356789988
No 62
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.11 E-value=0.03 Score=33.28 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=26.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|... |.. .+.-.|+||
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~c 46 (46)
T 2ytk_A 11 KPYKCNECGKVFTQNSHLTNHWRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-HSS-SSCSSCCCC
T ss_pred CCEeCCcCCCccCCHHHHHHHHHH-HCC-CCCCCCCCC
Confidence 359999999944 56788899875 543 356789998
No 63
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.07 E-value=0.049 Score=32.22 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=26.1
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456788899765 644 356789998
No 64
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.07 E-value=0.047 Score=32.42 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=26.5
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+. =-....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4566889999764 654 356789998
No 65
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.07 E-value=0.051 Score=32.14 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=26.0
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 59999999944 56778899764 654 356789998
No 66
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.06 E-value=0.037 Score=32.81 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=26.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999944 56788999865 654 356789988
No 67
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=94.01 E-value=0.014 Score=42.88 Aligned_cols=47 Identities=30% Similarity=0.684 Sum_probs=32.7
Q ss_pred CCCCCCCcchhhhccCcceecCCCCCC--CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 30 ~g~e~~e~d~d~e~~~~~~F~CPfC~e--~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
+.+||++-|++++.+ +|+|| ||. .++...|... --.+.||-|+-.+.
T Consensus 8 v~leDm~~de~~~~y---~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 8 IEIEDMTFEPENQMF---TYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp CBGGGSEEETTTTEE---EEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred EEHHHcEEcCCCCEE---EEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 456677666553344 89999 999 6777777421 23688999998664
No 68
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.00 E-value=0.048 Score=32.29 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=26.5
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 11 KLYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CCeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 35999999995 456788999765 644 356789988
No 69
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=93.99 E-value=0.043 Score=32.70 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=26.1
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456778899865 544 356789988
No 70
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.99 E-value=0.049 Score=32.33 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=26.6
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|+||
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 11 KPYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred cCeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 35999999994 456788999864 654 356789998
No 71
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.96 E-value=0.061 Score=31.91 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=26.0
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT-TTTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5678889976 4544 356789998
No 72
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.93 E-value=0.058 Score=32.09 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=26.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emf_A 11 KHFECTECGKAFTRKSTLSMHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEESCHHHHHHHGGG-TSC-SSCSCCCCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 359999999954 56788899874 543 466789998
No 73
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=93.85 E-value=0.061 Score=41.07 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=32.5
Q ss_pred eecCC--CCCC-CcCHHHHHhhhhhcCCCCCCcccc--cccccCcc--cchHhhhhcccc
Q 029557 48 EYPCP--FCSE-DFDLVGLCCHIDEEHPVEAKSGVC--PVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CP--fC~e-~~D~~~L~~H~~eeH~~e~k~vVC--PICa~~~~--~d~v~Hl~~qH~ 100 (191)
.|.|+ .|+. =.....|..|+...|....+.-+| ++|...-. .+|..|+...++
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 131 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence 46777 6777 445666777776666555556667 66755322 466677665443
No 74
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.85 E-value=0.03 Score=39.34 Aligned_cols=53 Identities=19% Similarity=0.264 Sum_probs=36.8
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhc-CCCCCCcccccccccCc----ccchHhhhhcccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEE-HPVEAKSGVCPVCVTRV----TMDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~ee-H~~e~k~vVCPICa~~~----~~d~v~Hl~~qH~ 100 (191)
.|.|+.|++ =.....|..|+... |..+.....|++|...- ..++..|+...++
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~ 77 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCC
Confidence 599999999 45678899999861 33333345599997543 2578888765443
No 75
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=93.79 E-value=0.038 Score=36.19 Aligned_cols=50 Identities=26% Similarity=0.458 Sum_probs=26.0
Q ss_pred ecC--CCCCCCc-CHHHHHhhhhhcCCCCCCcccccc--cccCcc--cchHhhhhcccc
Q 029557 49 YPC--PFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 49 F~C--PfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~~--~d~v~Hl~~qH~ 100 (191)
|.| +.|+..| ....|..|... |.. .+.-.|++ |...-. .++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 556 5566633 45566666543 322 23456666 654322 456666655544
No 76
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.79 E-value=0.054 Score=39.66 Aligned_cols=54 Identities=28% Similarity=0.344 Sum_probs=36.1
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCC-CCCcccccccc-----cCc--ccchHhhhhcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPV-EAKSGVCPVCV-----TRV--TMDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~-e~k~vVCPICa-----~~~--~~d~v~Hl~~qH~ 100 (191)
..|.|+.|+..| +...|..|+...|.. +.+.-+|++|. ..- ..++..|+...++
T Consensus 2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 358899999944 678899999876543 34566777643 221 2478888876554
No 77
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.78 E-value=0.042 Score=32.55 Aligned_cols=35 Identities=20% Similarity=0.125 Sum_probs=26.7
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+. =-....|..|+. .|..+ +.-.|++|
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNSHLANHQR-IHTGV-KPSGPSSG 46 (46)
T ss_dssp CSSEETTTTEECSSHHHHHHHHG-GGSCC-CSCSSCCC
T ss_pred CCeECCCcChhhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 3599999999 556678889976 46544 56789998
No 78
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.77 E-value=0.053 Score=37.76 Aligned_cols=51 Identities=22% Similarity=0.383 Sum_probs=38.8
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.| .|+. =-....|..|+...+. .+...|++|..... .+|..|+...++
T Consensus 9 k~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 9 KLYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CCEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CCEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 35999 9999 4467889999986543 35679999977543 589999987655
No 79
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=93.75 E-value=0.029 Score=42.37 Aligned_cols=49 Identities=24% Similarity=0.335 Sum_probs=34.3
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~ 97 (191)
-.|.|+.|+.. -....|..|+. .|..+ ++-.|++|...-. .+|..|+..
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSWE-KKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHCC-SCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCCC-CCeeCCccCeecccccchhhhccc
Confidence 35899999984 46678888876 46543 5568999876432 578888764
No 80
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.70 E-value=0.03 Score=33.29 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.8
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |..+ +.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en6_A 11 KPYGCNECGKTFSQKSILSAHQRT-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEEETTTTEEESSHHHHHHHHHH-HSSC-CCSSSCCC
T ss_pred cCeECCCCCcccCchHHHHHHHHH-cCCC-CCCCCCCC
Confidence 35999999994 456789999876 5443 56789998
No 81
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.65 E-value=0.069 Score=31.55 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=26.5
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|+. .|.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eme_A 11 KPYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred CCeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 35999999994 46678999986 4544 356789998
No 82
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.59 E-value=0.07 Score=31.62 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=26.5
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 11 KPYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred cCccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 35999999994 456789999765 543 456789998
No 83
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=93.54 E-value=0.042 Score=32.76 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=26.5
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|++.| ....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 11 KPFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CCcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 359999999955 46788899875 543 466789998
No 84
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.54 E-value=0.02 Score=40.27 Aligned_cols=53 Identities=11% Similarity=0.033 Sum_probs=39.1
Q ss_pred ceecCCCCCCCc---CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 47 YEYPCPFCSEDF---DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 47 ~~F~CPfC~e~~---D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...|..
T Consensus 49 ~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 49 NHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 356799999976 67788899765 543 35679999977543 5899998766643
No 85
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.51 E-value=0.081 Score=31.44 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=26.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG 46 (46)
T ss_dssp SSCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred CCeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 359999999955 5678889977 4543 456789998
No 86
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.41 E-value=0.04 Score=32.85 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=26.4
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 11 RPYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CCEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 35999999994 456778999766 543 356789988
No 87
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.35 E-value=0.051 Score=32.26 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=26.6
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp CSEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CCeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 35999999994 456788999765 554 356789998
No 88
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.33 E-value=0.04 Score=32.96 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=26.0
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+.. -....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ-RPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC-CCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 5999999994 456788899865 5443 56789998
No 89
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.32 E-value=0.051 Score=32.26 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=26.3
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emh_A 11 RPYICTVCGKAFTDRSNLIKHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH-HHC-SSCSSSCCC
T ss_pred CCcCCCCCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 35999999994 456788899764 544 356789998
No 90
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.32 E-value=0.066 Score=31.75 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=26.2
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRVHLTQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECTTTCCEESSSHHHHTTGGG-GSS-CCSSCSCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 359999999944 56788999754 544 356789998
No 91
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.30 E-value=0.076 Score=31.46 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=26.1
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|++. -....|..|+.. |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 11 KPYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CCeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 35999999994 456778899765 544 356789988
No 92
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.24 E-value=0.079 Score=31.39 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=26.0
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|++ =-....|..|... |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~~ 46 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRSNLFTHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT-TTTS-CCCCTTCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 3599999999 4456778899864 6443 56789887
No 93
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.21 E-value=0.057 Score=32.05 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=25.9
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|+.|+.. -....|..|... |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSCC-CCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 5999999994 456778899864 6443 56789988
No 94
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.20 E-value=0.086 Score=31.13 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=26.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2en8_A 11 KSHTCDECGKNFCYISALRIHQR-VHMGE-KCSGPSSG 46 (46)
T ss_dssp SSEECTTTCCEESSHHHHHHHHT-TTCCS-CSSCCSCC
T ss_pred CCeECCCcCcccCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 359999999954 5678899975 46543 56789988
No 95
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=93.16 E-value=0.082 Score=37.32 Aligned_cols=52 Identities=21% Similarity=0.355 Sum_probs=38.1
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccc--cccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+.. -....|..|+.. |.. .+.-.|++ |...-. .++..|+...++
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 35999999994 467889999875 433 35578987 976533 588899876555
No 96
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.10 E-value=0.082 Score=31.31 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=26.3
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+. =-....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4566889999764 654 356789998
No 97
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=93.08 E-value=0.086 Score=31.33 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=26.4
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+. =-....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 11 NPYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 3599999999 4456789999765 554 356789988
No 98
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.04 E-value=0.079 Score=31.40 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=26.0
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456778999765 544 356789998
No 99
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=92.97 E-value=0.048 Score=41.66 Aligned_cols=52 Identities=25% Similarity=0.450 Sum_probs=39.7
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++|+. =-+...|..|+...|. .+...|++|...-. .++..|+...++
T Consensus 76 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 130 (190)
T 2i13_A 76 KPYKCPECGKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTG 130 (190)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCccCcccCCccCCHHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCC
Confidence 3599999999 4577889999987553 35678999977543 589999876654
No 100
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.90 E-value=0.084 Score=31.16 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=26.1
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|++. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456788999765 544 456789988
No 101
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=92.90 E-value=0.059 Score=37.59 Aligned_cols=47 Identities=21% Similarity=0.307 Sum_probs=21.5
Q ss_pred ecCC--CCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhc
Q 029557 49 YPCP--FCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (191)
Q Consensus 49 F~CP--fC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~ 97 (191)
|.|+ .|+. --....|..|+...+ ..+.-.|++|...-. .++..|+..
T Consensus 37 ~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 37 YQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred ccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCHHHHHHHHHH
Confidence 5555 2555 223455555554422 123345555544322 355555543
No 102
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.80 E-value=0.066 Score=32.34 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=27.8
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCV 84 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa 84 (191)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCC
Confidence 469999999954 67889999765 544 3567899995
No 103
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=92.70 E-value=0.094 Score=34.74 Aligned_cols=52 Identities=19% Similarity=0.429 Sum_probs=31.0
Q ss_pred ceecCCC--CCCCc-CHHHHHhhhhhcCCCCCCccccc--ccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPf--C~e~~-D~~~L~~H~~eeH~~e~k~vVCP--ICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++ |+..| ....|..|+.. |.. .+.-.|| +|...-. .++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 62 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTG 62 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCC
Confidence 4577877 87744 56677777764 322 3446776 4765432 467777754443
No 104
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.66 E-value=0.07 Score=31.58 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=27.0
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+.. .....|..|+.. |.. .+.-.||+|
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~c 44 (45)
T 2epq_A 9 KPYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSS 44 (45)
T ss_dssp CSSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCC
Confidence 35999999995 467788999876 543 456789999
No 105
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.63 E-value=0.072 Score=31.58 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=26.4
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+. =-....|..|+.. |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 11 KPYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred cCeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 3599999999 4556788899765 543 456789988
No 106
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.63 E-value=0.094 Score=30.76 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=26.4
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 9 KPFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred cCccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 35999999994 456789999875 543 356789988
No 107
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=92.58 E-value=0.067 Score=34.94 Aligned_cols=48 Identities=21% Similarity=0.251 Sum_probs=37.3
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCcccccc---cccCc--ccchHhhhhccc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPV---CVTRV--TMDMVDHITTQH 99 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCPI---Ca~~~--~~d~v~Hl~~qH 99 (191)
..|.||+ |++ -.....|..|+...+. -.|++ |...- ..+|..|+...|
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 4699999 999 5578889999977554 68999 87643 368999987665
No 108
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.51 E-value=0.11 Score=30.76 Aligned_cols=35 Identities=26% Similarity=0.190 Sum_probs=26.3
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+..| ....|..|... |.. .+.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 11 KSHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CCEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 359999999954 56789999765 543 456789988
No 109
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.40 E-value=0.055 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=25.9
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
.|.|++|+. =-....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4566788999776 443 355789988
No 110
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.96 E-value=0.075 Score=31.48 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=26.0
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+.. -....|..|... |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2yu8_A 11 KPYKCNECGKVFTQNSHLARHRRV-HTGG-KPSGPSSG 46 (46)
T ss_dssp SSEECSSSCCEESSSHHHHHHTHH-HHSC-CCSCSCCC
T ss_pred CCeECCcCCchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 35999999994 456788899764 5443 56789988
No 111
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.93 E-value=0.13 Score=30.43 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=26.0
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|++|+.. -....|..|... |.. .+.-.|+||
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 11 KPFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CCEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 35999999994 456788899765 543 356789887
No 112
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.93 E-value=0.081 Score=31.45 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=26.4
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+.|+.. -....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 11 KPYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CCeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 35999999994 456789999875 543 356789988
No 113
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=91.86 E-value=0.063 Score=40.43 Aligned_cols=52 Identities=27% Similarity=0.439 Sum_probs=40.6
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~~ 101 (191)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|...-. .+|..|+...|+.
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTGE-RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHTC-CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhcc-ccCCC-ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 59999999954 5778999976 46543 5679999977533 6899999988864
No 114
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=91.76 E-value=0.13 Score=33.96 Aligned_cols=49 Identities=20% Similarity=0.398 Sum_probs=35.9
Q ss_pred ceecCCC--CCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhc
Q 029557 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (191)
Q Consensus 47 ~~F~CPf--C~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~ 97 (191)
..|.||+ |+..| ....|..|+.. |..+ +.-.|++|...-. .++..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRK-HTGH-RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHH-HHCC-CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHH-cCCC-CCccCCCCCcccCCHHHHHHHHHh
Confidence 4699986 99954 67889999864 5433 5678999977433 588888754
No 115
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=91.02 E-value=0.2 Score=36.71 Aligned_cols=51 Identities=25% Similarity=0.380 Sum_probs=37.2
Q ss_pred ecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc--cccCcc--cchHhhhhccccc
Q 029557 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHGN 101 (191)
Q Consensus 49 F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~~--~d~v~Hl~~qH~~ 101 (191)
|.|++|+..| ....|..|+...+ ..+...|++ |..... .+|..|+...++.
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRVHT--GEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHHHH--CCCSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred cCCCCcccccCCHHHHHHHHHhcC--CCCcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 8999999944 6778899988643 235678988 976543 5888998766553
No 116
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=90.93 E-value=0.24 Score=37.66 Aligned_cols=52 Identities=23% Similarity=0.332 Sum_probs=39.1
Q ss_pred ceecC--CCCCC-CcCHHHHHhhhhhcCCCCCCcccccc--cccCcc--cchHhhhhcccc
Q 029557 47 YEYPC--PFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~C--PfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~~--~d~v~Hl~~qH~ 100 (191)
..|.| +.|+. =-....|..|+.. |.. .+.-.||+ |...-. .+|..|+...+|
T Consensus 103 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 103 CVYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp SCCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred ceeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 35999 77999 5567889999875 433 35578988 977543 589999987666
No 117
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=90.51 E-value=0.051 Score=42.22 Aligned_cols=51 Identities=12% Similarity=0.195 Sum_probs=32.7
Q ss_pred CCCCCcchhhhccCcceecCCCCCC--CcCHHHHHhhhhhcCCCCCCcccccccccCcccchHhhh
Q 029557 32 FEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHI 95 (191)
Q Consensus 32 ~e~~e~d~d~e~~~~~~F~CPfC~e--~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~~d~v~Hl 95 (191)
+++++.+++++.+ .++|| ||. .+....|-. ...|.|+-|+-.+..-|..|-
T Consensus 99 ~~~m~~~e~~~~f---~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~~ 151 (155)
T 2l6l_A 99 LEEMSWNEGDHSF---YLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNHH 151 (155)
T ss_dssp TTTSEEETTTTEE---EEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCCC
T ss_pred HHHhccccCCcEE---EEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEcccc
Confidence 4455544443233 69999 998 555555543 167999999988766566553
No 118
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=90.36 E-value=0.23 Score=33.54 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=37.7
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhccc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 99 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH 99 (191)
..|.||+ |+. --....|..|+...+ . .+.-.|++|...-. .+|..|+...+
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 99 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRKHT-G-AKPFQCGVCNRSFSRSDHLALHMKRHQ 99 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHT-S-CCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHHhC-C-CCCeECCCCcCccCCHHHHHHHHHHhC
Confidence 4699986 999 556788999997644 3 35579999977543 58999986543
No 119
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=90.33 E-value=0.18 Score=35.06 Aligned_cols=52 Identities=23% Similarity=0.459 Sum_probs=38.6
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCccccc--ccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCP--ICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|++ |+. =.....|..|+...+ . .+...|+ +|...-. .+|..|+...++
T Consensus 5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHT-G-EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CCBCCCSTTSCCCBSCHHHHHHHHHHHH-T-TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeeCCCCCCcchhCCHHHHHHHHHhhC-C-CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 3699998 999 456889999988543 3 3567899 7976533 689999876554
No 120
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=90.06 E-value=0.16 Score=32.70 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=25.8
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|.||.|+..|....-.. ..|.. .+.-.|++|...
T Consensus 13 k~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~ 48 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTE 48 (62)
T ss_dssp SEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCB
T ss_pred CCccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCc
Confidence 3599999999887654332 56654 366899999654
No 121
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.27 E-value=0.38 Score=28.15 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=23.7
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|... |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999955 56778889765 5443 4567775
No 122
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.20 E-value=0.084 Score=35.04 Aligned_cols=43 Identities=26% Similarity=0.392 Sum_probs=26.4
Q ss_pred ceecCCCCCCCcCHH-H-HHhh-----hhhcCCCC-CCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLV-G-LCCH-----IDEEHPVE-AKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-~-L~~H-----~~eeH~~e-~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.+... . -|.| |...+... .....||+|...+..
T Consensus 19 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred cCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 679999999955532 1 1333 33333322 346789999887654
No 123
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=89.11 E-value=0.26 Score=30.59 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=24.0
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCC
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVE 74 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e 74 (191)
+-|.||.|-+ =-+...|..|-+..|..+
T Consensus 4 EGFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 4 EGFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred cccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 3599999999 557889999999999864
No 124
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=89.00 E-value=0.3 Score=25.58 Aligned_cols=27 Identities=26% Similarity=0.482 Sum_probs=20.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVE 74 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e 74 (191)
.|.|+.|+..| ....|..|+...|..+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccCC
Confidence 48999999955 5578889976667543
No 125
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=88.97 E-value=0.33 Score=31.18 Aligned_cols=48 Identities=21% Similarity=0.385 Sum_probs=34.9
Q ss_pred ceecCCC--CCCCc-CHHHHHhhhhhcCCCCCCcccccc--cccCcc--cchHhhhh
Q 029557 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHIT 96 (191)
Q Consensus 47 ~~F~CPf--C~e~~-D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~~~--~d~v~Hl~ 96 (191)
..|.|++ |+..| ....|..|+.. |.. .+.-.|++ |...-. .+|..|+.
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred CceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 4699999 99944 67889999865 533 35678976 977543 57788864
No 126
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.95 E-value=0.02 Score=36.57 Aligned_cols=45 Identities=18% Similarity=0.271 Sum_probs=30.0
Q ss_pred ceecCCCCCCCcCHH-HHHhhhhhcCCCCCCcccccccccCcc--cchHhhhhcccc
Q 029557 47 YEYPCPFCSEDFDLV-GLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-~L~~H~~eeH~~e~k~vVCPICa~~~~--~d~v~Hl~~qH~ 100 (191)
..|.|+.|+..|... .|.. .+.-.|++|..... .+|..|+...++
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~ 64 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESG 64 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred CCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence 359999999965432 2222 56688999976533 578888766444
No 127
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.56 E-value=0.55 Score=27.53 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=23.6
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|... |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTGE-RPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSCC-CCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999954 56788889764 5443 5567775
No 128
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.55 E-value=0.32 Score=28.61 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=23.6
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+. =-....|..|... |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCCC-CCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 4456778889865 5443 5567775
No 129
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=88.37 E-value=0.32 Score=34.34 Aligned_cols=29 Identities=34% Similarity=0.836 Sum_probs=25.2
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCC
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAK 76 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k 76 (191)
.|.|++|++ =.....|..|++..|..|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 599999999 45788999999999998764
No 130
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.15 E-value=0.55 Score=27.51 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=23.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 11 KPYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp CSSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 359999999954 56778889754 6543 4566764
No 131
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.09 E-value=0.48 Score=27.81 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=23.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 11 RHYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 359999999944 56788889764 5443 4566764
No 132
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.75 E-value=0.6 Score=27.55 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=23.5
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|+.|+.. -....|..|+.. |..+ +.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSGE-RPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTSC-CSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCCC-CCCCCCC
Confidence 5999999994 456778889754 6543 4567775
No 133
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.67 E-value=0.61 Score=27.33 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=23.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2enf_A 11 KPYKCNECGKVFTQNSHLVRHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHT-TTTTS-SCCCCSC
T ss_pred cCeECCCCCcccCCHHHHHHHHH-hhCCC-CCCCCCC
Confidence 359999999944 5677888865 45443 5567765
No 134
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.44 E-value=0.61 Score=27.23 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=23.8
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+. =-....|..|.. .|..+ +.-.|++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~ 45 (46)
T 2yts_A 11 KPYICNECGKSFIQKSHLNRHRR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGG-GTSSC-CSSCCCC
T ss_pred cCEECCCCChhhCChHHHHHHHH-hcCCC-CCcCCCC
Confidence 3599999999 445677888975 46443 4567765
No 135
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.20 E-value=0.68 Score=27.12 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=23.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq1_A 11 KPYKCNECGKAFRAHSNLTTHQV-IHTGE-KPSGPSS 45 (46)
T ss_dssp CCCCCTTTTCCCSSHHHHHHHHT-TTCCS-CCSSCCC
T ss_pred CCeECCcCChhhCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 359999999955 5677888976 46443 4566764
No 136
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.07 E-value=0.63 Score=27.36 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=24.1
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+.. -....|..|... |..+ +.-.||+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ytp_A 11 RHYECSECGKAFARKSTLIMHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTT-TSCC-CCCSSCC
T ss_pred CCeECCcCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 35999999994 456788889764 6443 5567765
No 137
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.02 E-value=0.47 Score=27.76 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=23.6
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+.. -....|..|+.. |..+ +.-.|++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eow_A 11 KPYKCNECGKAFRARSSLAIHQAT-HSGE-KPSGPSS 45 (46)
T ss_dssp CCEECTTSCCEESSHHHHHHHHHH-HCCC-SCSCTTC
T ss_pred CCeeccccCChhcCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 35999999994 456778889764 5443 4567765
No 138
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.77 E-value=0.61 Score=27.34 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=23.0
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSCS-CCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCCC-CCCCCCC
Confidence 59999999955 5567888865 46543 4567764
No 139
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.76 E-value=0.72 Score=27.09 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=22.6
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|+.|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 59999999954 55778888754 5443 4566764
No 140
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.87 E-value=0.74 Score=26.86 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=23.2
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+. =-....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCSS-SSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 4466778889764 5443 4556765
No 141
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=85.85 E-value=0.52 Score=27.75 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=23.1
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+.. -....|..|... |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTTS-CSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 5999999994 456778888764 5433 4566765
No 142
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=85.76 E-value=0.68 Score=28.49 Aligned_cols=28 Identities=29% Similarity=0.532 Sum_probs=23.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 75 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~ 75 (191)
.|.|++|+..| ....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 59999999954 67899999988887653
No 143
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.39 E-value=0.73 Score=27.06 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=23.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|... |..+ +.-.|+|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH-HTSS-CCCSCCC
T ss_pred CCEECCccCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 359999999944 56778888765 5433 4567765
No 144
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.84 E-value=0.89 Score=26.48 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=23.3
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yrj_A 11 KPYRCGECGKAFAQKANLTQHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHT-TTSSC-CSSCSCC
T ss_pred CCeECCCCCCccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 359999999944 5677888975 45433 4566764
No 145
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=84.78 E-value=0.89 Score=25.95 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=20.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+..| ....|..|... |..+ +.-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 58999999944 45678888754 5433 444554
No 146
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=84.65 E-value=0.59 Score=36.17 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=27.8
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSG 78 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~v 78 (191)
..+.|=||.+ --++..+..||.+.|.++-..+
T Consensus 14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i 46 (121)
T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSM 46 (121)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHH
T ss_pred CceeEecCCCcccCHHHHHHHHHHhcCCCHHHH
Confidence 4699999999 6689999999999999976543
No 147
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.60 E-value=0.8 Score=26.88 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=23.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|+.|+..| ....|..|.. .|....+.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 59999999944 5578888875 4654134566764
No 148
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=84.54 E-value=0.18 Score=33.99 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=24.1
Q ss_pred ceecCCCCCCCcCHHH--HHhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+-|.... -|.| |...+- ......||+|...+.
T Consensus 7 ~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~-~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHH-TTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCCEEcCCCCeecHHHHHHHH-HHCcCCCCCCcCCCC
Confidence 6799999998554321 1223 222222 223578999988765
No 149
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.32 E-value=0.81 Score=26.84 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=22.8
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 59999999944 45778888764 543 35567764
No 150
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.90 E-value=0.69 Score=30.13 Aligned_cols=28 Identities=21% Similarity=0.599 Sum_probs=23.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 75 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~ 75 (191)
.|.|++|+..| ....|..|+...|..+.
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred ccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 69999999954 67899999999998754
No 151
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=83.86 E-value=0.69 Score=23.79 Aligned_cols=24 Identities=33% Similarity=0.679 Sum_probs=17.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEH 71 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH 71 (191)
.|.|+.|+..| ....|..|....|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHHc
Confidence 37899998855 4577888876544
No 152
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.76 E-value=1.2 Score=26.02 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=23.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSSS-CCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 59999999955 5677888965 46443 4566764
No 153
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=83.73 E-value=0.59 Score=32.79 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=24.8
Q ss_pred ceecCCCCCC------------CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e------------~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+ .|+...+..|+.. ...||+|.....
T Consensus 13 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 59 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLT 59 (85)
T ss_dssp TTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCC
T ss_pred hheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCC
Confidence 5799998764 4566666666663 368999988654
No 154
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.68 E-value=1.1 Score=26.05 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=23.5
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|+.|+..| ....|..|... |.. .+.-.|+|
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 9 GAFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CCBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CCEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 359999999954 56778888765 443 34566765
No 155
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=83.52 E-value=0.055 Score=37.72 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=25.1
Q ss_pred ceecCCCCCCCcCH-HHH--Hhh-----hhhcCCCCCCcccccccccCc
Q 029557 47 YEYPCPFCSEDFDL-VGL--CCH-----IDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 47 ~~F~CPfC~e~~D~-~~L--~~H-----~~eeH~~e~k~vVCPICa~~~ 87 (191)
..|.||.|.+.|.. ..| |.| |...+........||+|...+
T Consensus 12 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 67999999984432 222 344 333333333457899998864
No 156
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.31 E-value=1.1 Score=29.18 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=28.3
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
.|.|++|+..| ....|..|+...|.. +...|++|..
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~~~h~~~--~~~~~~~~~~ 83 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHADNCAGP--DGVEGENSGP 83 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHHHHCCCC--CSCCCCCCCC
T ss_pred ceECCCCCChhCCHHHHHHHHHHccCC--CCcccCCCCC
Confidence 59999999944 778899999876643 4567888864
No 157
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=83.30 E-value=0.23 Score=36.44 Aligned_cols=35 Identities=23% Similarity=0.775 Sum_probs=22.4
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|.||||+-+=. .+|.-......-.+.|-+|-..
T Consensus 22 t~F~CPfCnh~~s-----V~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 22 TQFTCPFCNHEKS-----CDVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp SCCCCTTTCCSSC-----EEEEEETTTTEEEEEESSSCCE
T ss_pred CeEcCCCCCCCCe-----EEEEEEccCCEEEEEcccCCCe
Confidence 6899999998421 1233333333455889999764
No 158
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.21 E-value=0.75 Score=26.83 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=23.2
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
..|.|++|+..| ....|..|... |..+ +.-.|||
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-kp~~C~~ 45 (46)
T 2eor_A 11 KPYNCEECGKAFIHDSQLQEHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH-HHSC-CCSSSTT
T ss_pred cCccCCCCCCCcCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 359999999944 56778888764 5433 4567775
No 159
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=83.18 E-value=0.4 Score=32.04 Aligned_cols=43 Identities=28% Similarity=0.460 Sum_probs=26.6
Q ss_pred ceecCCCCCCCcCHHH-------HHhhhhhcCCCC-----CCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG-------LCCHIDEEHPVE-----AKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~-------L~~H~~eeH~~e-----~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.|.... .|..|...+... .....||+|...+..
T Consensus 11 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 5789999988554321 223344444433 236789999887753
No 160
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.15 E-value=1.1 Score=25.68 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=21.0
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+. =-....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 589999999 4456778888764 5433 344553
No 161
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=82.89 E-value=1.4 Score=29.55 Aligned_cols=46 Identities=30% Similarity=0.491 Sum_probs=33.5
Q ss_pred CCCCc-CHHHHHhhhhhcCCCCC-----Cccccc--ccccC--cccchHhhhhccc
Q 029557 54 CSEDF-DLVGLCCHIDEEHPVEA-----KSGVCP--VCVTR--VTMDMVDHITTQH 99 (191)
Q Consensus 54 C~e~~-D~~~L~~H~~eeH~~e~-----k~vVCP--ICa~~--~~~d~v~Hl~~qH 99 (191)
|++.| +...|+.|+..+|.... .+.+|. -|... ....|+.||+..|
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 88844 56679999999998654 357776 67653 2257999998776
No 162
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.96 E-value=0.89 Score=26.53 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=22.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|.. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTGE-KSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSSC-CCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCCC-CCCCCCC
Confidence 59999999954 4567888875 45543 4566764
No 163
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.93 E-value=1.6 Score=25.44 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=26.1
Q ss_pred ceecCC--CCCCC-cCHHHHHhhhhhcCCCCCCccccccc
Q 029557 47 YEYPCP--FCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 83 (191)
Q Consensus 47 ~~F~CP--fC~e~-~D~~~L~~H~~eeH~~e~k~vVCPIC 83 (191)
..|.|+ .|+.. .....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 11 KPFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 359997 89994 466788999765 554 356789988
No 164
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.76 E-value=0.89 Score=29.33 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=28.3
Q ss_pred ceecCCC--CCC-CcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPf--C~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
..|.|++ |+. =-....|..|+.. |.. .+.-.|++|..
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k 76 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGP 76 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSC
T ss_pred CCeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCC
Confidence 3599999 999 4467889999985 543 35679999964
No 165
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=81.42 E-value=0.4 Score=33.59 Aligned_cols=42 Identities=21% Similarity=0.553 Sum_probs=26.0
Q ss_pred ceecCCCCCCCcCHHH---H---Hhh-----hhhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG---L---CCH-----IDEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~---L---~~H-----~~eeH~~e~k~vVCPICa~~~~~ 89 (191)
..+.||.|-+.+++.. + |-| |-.... +..+..||+|...+..
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~-~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT-TSSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCccccccccccCCCCCcCHHHHHHHH-hcCCCCCCCCCCccCC
Confidence 4688999999775431 1 444 222222 2246789999887653
No 166
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=81.38 E-value=1 Score=27.28 Aligned_cols=30 Identities=27% Similarity=0.577 Sum_probs=19.3
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKS 77 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~ 77 (191)
.|.|++|+.. .....|..|+...|..+...
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 5888899884 45667888887567665543
No 167
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=81.19 E-value=0.65 Score=29.10 Aligned_cols=25 Identities=32% Similarity=0.577 Sum_probs=22.3
Q ss_pred ecCCCCCC-CcCHHHHHhhhhhcCCC
Q 029557 49 YPCPFCSE-DFDLVGLCCHIDEEHPV 73 (191)
Q Consensus 49 F~CPfC~e-~~D~~~L~~H~~eeH~~ 73 (191)
--|-||-+ .-|+.-|..|+.+.|-.
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46999999 88999999999999954
No 168
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.17 E-value=1.7 Score=24.83 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=20.7
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+..| ....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcCCC-CCCCCC
Confidence 58999999944 5567888875 45433 334453
No 169
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=81.13 E-value=1.3 Score=32.06 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=23.2
Q ss_pred ceecCCCCCC-------------CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSE-------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e-------------~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+ .|+...+..|+.. ...||+|...+.
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCC
T ss_pred HhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCC
Confidence 6799999765 2444445555442 358999988654
No 170
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.00 E-value=1.3 Score=26.05 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=22.5
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|... |..+ +.-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSSC-CCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999955 55778888765 5433 4456654
No 171
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.86 E-value=0.65 Score=25.83 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=17.4
Q ss_pred ceecCCCCCCCcCH--HHHHhhhhh
Q 029557 47 YEYPCPFCSEDFDL--VGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~D~--~~L~~H~~e 69 (191)
..|.|++|+..|.. ..|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 8 RAMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CCEECSSSSCEECSSCHHHHHHHHH
T ss_pred CCeECCCCChhhccCHHHHHHHHHh
Confidence 35999999996665 578888753
No 172
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.77 E-value=0.21 Score=33.53 Aligned_cols=43 Identities=26% Similarity=0.433 Sum_probs=24.6
Q ss_pred ceecCCCCCCCcCHHH--HHhhh-----hhcCCC----CCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCHI-----DEEHPV----EAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H~-----~eeH~~----e~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.+.... -|.|. ...+.. ......||+|...+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 6799999999654321 13332 111111 1236789999887653
No 173
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=80.52 E-value=1.2 Score=22.76 Aligned_cols=22 Identities=23% Similarity=0.511 Sum_probs=16.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 38899999955 55677888764
No 174
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.34 E-value=2.1 Score=24.17 Aligned_cols=31 Identities=32% Similarity=0.530 Sum_probs=20.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVC 80 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVC 80 (191)
.|.|+.|+..| ....|..|... |..+ +.-.|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 41 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTVK-SGPSS 41 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSCC-SSCCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCCC-CCCCC
Confidence 58999999944 56778888764 5443 33344
No 175
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.29 E-value=1.9 Score=25.21 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=21.5
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+..| ....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSGE-KPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCCS-CCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 58999999955 45678888764 5433 445665
No 176
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=80.25 E-value=1.2 Score=32.44 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=23.6
Q ss_pred ceecCCCCCC------------CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e------------~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+ .|+...+..|+.. ...||+|...+.
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 74 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLT 74 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCC
T ss_pred HhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCC
Confidence 6899999876 2444555555542 368999988654
No 177
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=80.18 E-value=1.9 Score=28.64 Aligned_cols=43 Identities=28% Similarity=0.451 Sum_probs=25.2
Q ss_pred ceecCCCCCCCcCHHH--HHhh-----hhhcCC----CCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCH-----IDEEHP----VEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H-----~~eeH~----~e~k~vVCPICa~~~~~ 89 (191)
..|.||.|.+.+.... -|.| |...+. .+.....||+|...+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 5689999988654321 1333 222221 12346889999887653
No 178
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=80.09 E-value=1.1 Score=34.59 Aligned_cols=45 Identities=29% Similarity=0.431 Sum_probs=22.5
Q ss_pred ecCC--CCCCCcCHHHHHhhhhhcCCCCCCcccccccccCcc-cchHhhhh
Q 029557 49 YPCP--FCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHIT 96 (191)
Q Consensus 49 F~CP--fC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~-~d~v~Hl~ 96 (191)
..|| -|.+-+.+..|..|.. .+ +-+.+.||-|...+. .++..|+.
T Consensus 83 v~C~n~GC~~~~~~~~l~~H~~--~C-~~~~v~C~~C~~~~~r~~l~~H~~ 130 (170)
T 3hcs_A 83 VKCPNEGCLHKMELRHLEDHQA--HC-EFALMDCPQCQRPFQKFHINIHIL 130 (170)
T ss_dssp EECCSTTCCCEEEGGGHHHHHT--TC-TTSEEECTTTCCEEEGGGHHHHHH
T ss_pred cCCCCCCCCceecHhHHHHHHh--cC-CceeeECCCCChHHHHHHHHHHhh
Confidence 5564 3555555556666642 11 223455666655432 45555653
No 179
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.05 E-value=0.99 Score=26.46 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=22.4
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+. =-....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQE-TLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSSC-CSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 4456778888765 5433 4456764
No 180
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.89 E-value=0.28 Score=31.79 Aligned_cols=13 Identities=31% Similarity=0.731 Sum_probs=10.6
Q ss_pred ceecCCCCCCCcC
Q 029557 47 YEYPCPFCSEDFD 59 (191)
Q Consensus 47 ~~F~CPfC~e~~D 59 (191)
..+.||.|.+.+.
T Consensus 19 ~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 19 EEVICPICLDILQ 31 (63)
T ss_dssp CCCBCTTTCSBCS
T ss_pred cCCCCCcCCchhC
Confidence 6799999998555
No 181
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=79.46 E-value=1.1 Score=22.87 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=16.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 48899999954 56678888654
No 182
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=79.45 E-value=1 Score=27.24 Aligned_cols=24 Identities=29% Similarity=0.693 Sum_probs=20.3
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcC
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEH 71 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH 71 (191)
.|.|++|+.. -....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 5999999994 46788999998776
No 183
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.19 E-value=1.5 Score=28.44 Aligned_cols=30 Identities=27% Similarity=0.695 Sum_probs=24.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAK 76 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k 76 (191)
..|.|++|+..| ....|..|+...|..+..
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred cccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 369999999954 678899999999987543
No 184
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=79.09 E-value=1.8 Score=21.86 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=15.3
Q ss_pred ecCCCCCCCcC-HHHHHhhhhh
Q 029557 49 YPCPFCSEDFD-LVGLCCHIDE 69 (191)
Q Consensus 49 F~CPfC~e~~D-~~~L~~H~~e 69 (191)
|.|+.|+..|. ...|..|...
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 78999998554 5677778753
No 185
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=78.95 E-value=0.66 Score=32.74 Aligned_cols=29 Identities=28% Similarity=0.635 Sum_probs=22.2
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~ 87 (191)
..|.|+-||..|++. +...+.||-|-.++
T Consensus 27 v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 27 LKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred EEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 579999999987653 33467899997754
No 186
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.77 E-value=2 Score=25.02 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=21.8
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+..| ....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTGE-RSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSSC-CSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 59999999954 45778888764 5433 445565
No 187
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=78.69 E-value=1.2 Score=27.92 Aligned_cols=26 Identities=35% Similarity=0.828 Sum_probs=21.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHP 72 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~ 72 (191)
..|.|++|+..| ....|..|+...|.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999955 66789999988774
No 188
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.67 E-value=0.64 Score=29.15 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=10.7
Q ss_pred ceecCCCCCCCcCH
Q 029557 47 YEYPCPFCSEDFDL 60 (191)
Q Consensus 47 ~~F~CPfC~e~~D~ 60 (191)
..+.||.|.+.+..
T Consensus 14 ~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 14 VEASCSVCLEYLKE 27 (58)
T ss_dssp CCCBCSSSCCBCSS
T ss_pred cCCCCccCCcccCc
Confidence 56899999986543
No 189
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.20 E-value=1.1 Score=26.26 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=21.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPI 82 (191)
.|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSRE-KSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHHT-TCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 58999999944 45677788664 4332 4456653
No 190
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=78.19 E-value=1.5 Score=22.44 Aligned_cols=22 Identities=27% Similarity=0.785 Sum_probs=17.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 58999999955 56778888764
No 191
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.09 E-value=0.23 Score=33.84 Aligned_cols=40 Identities=23% Similarity=0.483 Sum_probs=23.7
Q ss_pred ceecCCCCCCCcCHHHH--Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVGL--CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L--~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.+....+ |.| |...+. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcCcccc
Confidence 57999999985543321 333 222221 12457999988765
No 192
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.08 E-value=1.6 Score=25.50 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=21.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+..| ....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 58899999844 56778888755 5433 444554
No 193
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=77.95 E-value=2 Score=23.63 Aligned_cols=22 Identities=27% Similarity=0.602 Sum_probs=16.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|++|+..| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 59999999954 45677778654
No 194
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.84 E-value=1.3 Score=24.36 Aligned_cols=23 Identities=22% Similarity=0.492 Sum_probs=17.8
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhh
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
..|.|++|++.| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCEECCCCCceeCCHHHHHHHHHH
Confidence 469999999954 56778888764
No 195
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.81 E-value=0.53 Score=31.58 Aligned_cols=42 Identities=31% Similarity=0.713 Sum_probs=26.7
Q ss_pred ceecCCCCCCCcCHHH-----HHhhhhhcCCCC---CCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVG-----LCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~-----L~~H~~eeH~~e---~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 5689999988765331 366654333332 13368999988764
No 196
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.23 E-value=1.6 Score=23.49 Aligned_cols=22 Identities=36% Similarity=0.800 Sum_probs=16.5
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 58999999944 55778888764
No 197
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=77.22 E-value=1.5 Score=22.43 Aligned_cols=22 Identities=18% Similarity=0.659 Sum_probs=16.6
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 58999999954 46778888653
No 198
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.93 E-value=2.7 Score=24.10 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=20.9
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|+.|+.. -....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THAAK-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGCCC-CCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCCC-CCcCCC
Confidence 5899999994 45677888876 45433 334453
No 199
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=76.53 E-value=2 Score=23.29 Aligned_cols=23 Identities=17% Similarity=0.457 Sum_probs=17.0
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhh
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
..|.|++|+..| ....|..|...
T Consensus 6 k~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 6 RPFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp SCEECSSSCCEESSHHHHHHHHGG
T ss_pred cCeeCCCCCcccCCHHHHHHHHHH
Confidence 358999999954 56778888754
No 200
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=76.39 E-value=1.2 Score=22.55 Aligned_cols=22 Identities=32% Similarity=0.736 Sum_probs=15.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKI 24 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHH
Confidence 37888898855 45567777653
No 201
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=76.38 E-value=0.33 Score=34.23 Aligned_cols=49 Identities=14% Similarity=0.386 Sum_probs=30.8
Q ss_pred ceecCCCCCCCcCHHHH-----Hhh-----hhhcCCC----C--CCcccccc--cccC--cccchHhhh
Q 029557 47 YEYPCPFCSEDFDLVGL-----CCH-----IDEEHPV----E--AKSGVCPV--CVTR--VTMDMVDHI 95 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L-----~~H-----~~eeH~~----e--~k~vVCPI--Ca~~--~~~d~v~Hl 95 (191)
..|.||.|.+.+..... |.| |-..|.. + ...+.||. |... +..+.+..+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 46899999987765432 555 3222221 1 13578999 9988 776666554
No 202
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.25 E-value=1.9 Score=29.12 Aligned_cols=43 Identities=28% Similarity=0.548 Sum_probs=25.0
Q ss_pred ceecCCCCCCCcCHHH-----H-Hhh-----hhhcCCC-CCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG-----L-CCH-----IDEEHPV-EAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~-----L-~~H-----~~eeH~~-e~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.|+... | |.| |...... ......||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 5689999999776511 1 223 2211111 1235789999887654
No 203
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=76.04 E-value=1.3 Score=22.80 Aligned_cols=22 Identities=32% Similarity=0.608 Sum_probs=15.6
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTG
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 37899998844 45677777654
No 204
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.99 E-value=1.9 Score=24.11 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=18.0
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~ 72 (191)
.|.|+.|+..| ....|..|+...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 58999999954 56778888545554
No 205
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.64 E-value=2.1 Score=24.82 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=21.1
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+. =-....|..|+.. |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTGK-KPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCCC-CCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 588999998 4455778888754 5433 345565
No 206
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=75.48 E-value=0.86 Score=32.30 Aligned_cols=29 Identities=21% Similarity=0.455 Sum_probs=20.9
Q ss_pred CcccccccccCc-----ccchHhhhhcccccchh
Q 029557 76 KSGVCPVCVTRV-----TMDMVDHITTQHGNISN 104 (191)
Q Consensus 76 k~vVCPICa~~~-----~~d~v~Hl~~qH~~~~K 104 (191)
..++|.+|-..+ +.||.+||...|...|+
T Consensus 28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~ 61 (73)
T 2ct5_A 28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFC 61 (73)
T ss_dssp SCCEETTTTEECCCCSSTHHHHHHHHHSCHHHHH
T ss_pred CEEECCCCCccccCCCChHhHHHHHHHHCHHHHH
Confidence 345666665543 26999999999988776
No 207
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=74.96 E-value=0.26 Score=36.29 Aligned_cols=41 Identities=22% Similarity=0.338 Sum_probs=24.8
Q ss_pred ceecCCCCCCCcCHHH--HHhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|.... -|.| |...+.. .+...||+|...+.
T Consensus 51 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRYDLG 98 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCC
T ss_pred cCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCccCC
Confidence 5799999998555322 2333 3333222 34458999987764
No 208
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=74.83 E-value=1.7 Score=34.73 Aligned_cols=26 Identities=35% Similarity=0.685 Sum_probs=18.0
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|.||.||--++- + -+.+||||...
T Consensus 137 ~~~~C~~CG~i~~~-------------~-~p~~CP~Cg~~ 162 (170)
T 3pwf_A 137 KVYICPICGYTAVD-------------E-APEYCPVCGAP 162 (170)
T ss_dssp CEEECTTTCCEEES-------------C-CCSBCTTTCCB
T ss_pred CeeEeCCCCCeeCC-------------C-CCCCCCCCCCC
Confidence 46899999984430 2 23499999753
No 209
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=74.83 E-value=0.33 Score=32.77 Aligned_cols=40 Identities=20% Similarity=0.446 Sum_probs=22.7
Q ss_pred ceecCCCCCCCcCHHH-H--Hhhh-----hhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDFDLVG-L--CCHI-----DEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~-L--~~H~-----~eeH~~e~k~vVCPICa~~ 86 (191)
..+.||.|.+.|.... | |.|. ...+........||+|...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 6799999998554432 2 3342 2221112223589999875
No 210
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.48 E-value=2.2 Score=24.45 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=20.0
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+.. -....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSGQ-SGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSSS-CSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCCC-CCCCCC
Confidence 5889999884 445677788654 5433 334453
No 211
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=73.91 E-value=2.2 Score=21.81 Aligned_cols=22 Identities=23% Similarity=0.498 Sum_probs=16.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
.|.|+.|+..| ....|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 58999999954 45678888653
No 212
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=72.90 E-value=1.1 Score=28.79 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=27.1
Q ss_pred ceecCCCCCCCcCHHH--HHhhhhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|.... =|.|.-=..+.......||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 4688999999555331 24554434444446678999987654
No 213
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=72.88 E-value=2.2 Score=25.68 Aligned_cols=25 Identities=24% Similarity=0.566 Sum_probs=19.6
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEH 71 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH 71 (191)
..|.|++|+..| ....|..|+...|
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred CCccCCCCCchhcCHHHHHHHHHHhc
Confidence 359999999954 6788999986554
No 214
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.77 E-value=2.3 Score=23.22 Aligned_cols=23 Identities=17% Similarity=0.478 Sum_probs=17.3
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhh
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
..|.|++|+..| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 8 KPFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp CSEECSSSSCEESCHHHHHHHHHH
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 359999999955 56778888754
No 215
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.74 E-value=3.6 Score=23.64 Aligned_cols=32 Identities=22% Similarity=0.186 Sum_probs=20.5
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVC 80 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVC 80 (191)
..|.|+.|+..| ....|..|... |..+ +.-.|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C 43 (44)
T 2eou_A 11 TTSECQECGKIFRHSSLLIEHQAL-HAGE-SGPSS 43 (44)
T ss_dssp CCCCCTTTCCCCSSHHHHHHHHHH-HTTS-CCCCC
T ss_pred cCeECCCCCcccCCHHHHHHHHHH-HCCC-CCCCC
Confidence 358999999955 45678888764 4332 33444
No 216
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=72.71 E-value=0.97 Score=29.53 Aligned_cols=33 Identities=27% Similarity=0.722 Sum_probs=18.8
Q ss_pred eecCCCCCCCcCHHHHHhhhhhcCCCCCCc--cccccccc
Q 029557 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKS--GVCPVCVT 85 (191)
Q Consensus 48 ~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~--vVCPICa~ 85 (191)
.|.|+.||--+|...= +..+++.-. -+||+|.+
T Consensus 4 ~y~C~vCGyvyd~~~G-----d~t~f~~lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEH-----DNVPFDQLPDDWCCPVCGV 38 (46)
T ss_dssp CEEETTTCCEECGGGG-----TTCCGGGSCTTCBCTTTCC
T ss_pred EEECCCCCeEEeCCcC-----CCcchhhCCCCCcCcCCCC
Confidence 5788888875553210 003443333 38888865
No 217
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.71 E-value=2.8 Score=22.74 Aligned_cols=23 Identities=22% Similarity=0.273 Sum_probs=17.3
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhh
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
..|.|+.|+..| ....|..|...
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHHHHHH
Confidence 359999999965 45778888754
No 218
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.69 E-value=1.6 Score=23.96 Aligned_cols=23 Identities=26% Similarity=0.608 Sum_probs=16.9
Q ss_pred eecCCCCCCC-cCHHHHHhhhhhc
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDEE 70 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~ee 70 (191)
.|.|++|+.. .....|..|....
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~h 32 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKTN 32 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHHH
Confidence 5899999994 4557788887653
No 219
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=72.55 E-value=2.1 Score=34.71 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=26.2
Q ss_pred ceecCCCCCC------------CcCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e------------~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+ .|+...+..|+...+ . .||+|.....
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~-----~-tcP~t~~~l~ 152 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG-----H-FDPVTRSPLT 152 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC-----S-BCTTTCCBCC
T ss_pred HhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC-----C-CCCCCcCCCC
Confidence 6799999654 567777888886532 1 6999987654
No 220
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.13 E-value=1.9 Score=27.36 Aligned_cols=27 Identities=26% Similarity=0.459 Sum_probs=21.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVE 74 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e 74 (191)
.|.|++|+..| ....|..|+...|...
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence 59999999944 6788999998877543
No 221
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.04 E-value=2.3 Score=23.11 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=16.9
Q ss_pred ceecCCCCCCCcC-HHHHHhhhhh
Q 029557 47 YEYPCPFCSEDFD-LVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~D-~~~L~~H~~e 69 (191)
..|.|++|+..|. ...|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 8 KPYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp CSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH
Confidence 3599999999554 5678888753
No 222
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.57 E-value=4.3 Score=22.79 Aligned_cols=24 Identities=33% Similarity=0.655 Sum_probs=16.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~ 72 (191)
.|.|++|+..| ....|..|... |.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 35 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV-HT 35 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG-TS
T ss_pred CeeCCCccchhCCHHHHHHHHHH-hC
Confidence 58899998844 45677888753 54
No 223
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.05 E-value=3.1 Score=23.83 Aligned_cols=24 Identities=25% Similarity=0.451 Sum_probs=16.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~ 72 (191)
.|.|++|+..| ....|..|... |.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 36 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT-HA 36 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH-CC
T ss_pred CeECCCCCchhCCHHHHHHHhHh-cC
Confidence 48888888843 45677778654 44
No 224
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=70.68 E-value=1.2 Score=33.20 Aligned_cols=12 Identities=42% Similarity=1.445 Sum_probs=10.3
Q ss_pred ceecCCCCCCCc
Q 029557 47 YEYPCPFCSEDF 58 (191)
Q Consensus 47 ~~F~CPfC~e~~ 58 (191)
-.|.||.||++|
T Consensus 50 F~FkCP~CgEEF 61 (95)
T 2k5c_A 50 FVFKCPVCGEEF 61 (95)
T ss_dssp SEEECTTTCCEE
T ss_pred HhhcCCCccHHH
Confidence 369999999976
No 225
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=70.45 E-value=2.8 Score=22.91 Aligned_cols=25 Identities=32% Similarity=0.676 Sum_probs=17.4
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
.|.|+.|+..| ....|..|+.. |..
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~~-H~~ 27 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHITL-HEL 27 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHH-HTT
T ss_pred cccCCCCCchhCCHHHHHHHHHH-hCC
Confidence 37899999954 56778888653 543
No 226
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.06 E-value=3.8 Score=22.28 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=14.8
Q ss_pred eecCCCCCCC-cCHHHHHhhhhh
Q 029557 48 EYPCPFCSED-FDLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~-~D~~~L~~H~~e 69 (191)
.|.|+.|+.. .....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 5888888884 345567777653
No 227
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=70.00 E-value=1.9 Score=29.00 Aligned_cols=46 Identities=20% Similarity=0.428 Sum_probs=30.7
Q ss_pred eecCC-CCCCCcCHHHHHhhhhhcCCCCCCcccccccccCcc-cchHhhh
Q 029557 48 EYPCP-FCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHI 95 (191)
Q Consensus 48 ~F~CP-fC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~-~d~v~Hl 95 (191)
.-.|| .|++.+-...|-.|+..+ -..+.+.|+.|...+. .++..|.
T Consensus 16 ~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred ccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 46775 688877777777777542 2345678888876554 4666665
No 228
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=72.75 E-value=0.93 Score=23.46 Aligned_cols=22 Identities=27% Similarity=0.522 Sum_probs=15.7
Q ss_pred eecCCCCCCCcC-HHHHHhhhhh
Q 029557 48 EYPCPFCSEDFD-LVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPfC~e~~D-~~~L~~H~~e 69 (191)
.|.|++|+..|. ...|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 488999999554 4567777653
No 229
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=69.55 E-value=2 Score=22.21 Aligned_cols=21 Identities=29% Similarity=0.828 Sum_probs=15.7
Q ss_pred eecCCCCCCCc-CHHHHHhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHID 68 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~ 68 (191)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 48999999955 4566788864
No 230
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=68.87 E-value=1.3 Score=31.61 Aligned_cols=10 Identities=40% Similarity=1.242 Sum_probs=9.3
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|.||||+.
T Consensus 25 ~ky~C~fCgk 34 (72)
T 3jyw_9 25 ARYDCSFCGK 34 (72)
T ss_dssp SCBCCSSCCS
T ss_pred cCccCCCCCC
Confidence 7899999998
No 231
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.41 E-value=1.8 Score=28.56 Aligned_cols=44 Identities=18% Similarity=0.377 Sum_probs=26.8
Q ss_pred ceecCCCCCCCcCHH-HH-Hhh-----hhhcCCCCCCcccccccccCcccchH
Q 029557 47 YEYPCPFCSEDFDLV-GL-CCH-----IDEEHPVEAKSGVCPVCVTRVTMDMV 92 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-~L-~~H-----~~eeH~~e~k~vVCPICa~~~~~d~v 92 (191)
..+.||.|.+.+... .| |.| |...... +...||+|...+..+.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHVFCYLCVKGASW--LGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTT--CSSBCSSSCCBCCHHHH
T ss_pred CCCCCccCCcccCCCEEccCCCHHHHHHHHHHHH--CCCcCcCcCchhCHhhc
Confidence 468999999955432 22 444 3333222 23689999988765444
No 232
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.32 E-value=4 Score=23.00 Aligned_cols=26 Identities=27% Similarity=0.419 Sum_probs=18.9
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
..|.|++|+..| ....|..|... |..
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~-H~~ 35 (41)
T 2ept_A 9 RVYECQECGKSFRQKGSLTLHERI-HTG 35 (41)
T ss_dssp CCEECSSSCCEESSHHHHHHHGGG-CCC
T ss_pred CCeECCCCCCCcCCHHHHHHHHHH-hCC
Confidence 359999999955 56778889754 543
No 233
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=68.12 E-value=2.8 Score=33.73 Aligned_cols=36 Identities=17% Similarity=0.080 Sum_probs=22.4
Q ss_pred ceecCCCCCCC------------cCHHHHHhhhhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSED------------FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~------------~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+- |+...+..|+... ...||+|...+.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~ 254 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLT 254 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCC
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCc
Confidence 57999998763 3344445555432 123999988664
No 234
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=68.12 E-value=0.99 Score=39.29 Aligned_cols=42 Identities=21% Similarity=0.462 Sum_probs=25.2
Q ss_pred ceecCCCCCCCcCHHH---HHhhhh-----hcCCCCCCcccccc--cccCcc
Q 029557 47 YEYPCPFCSEDFDLVG---LCCHID-----EEHPVEAKSGVCPV--CVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~---L~~H~~-----eeH~~e~k~vVCPI--Ca~~~~ 88 (191)
..|.||.|.+-|.... -|.|.- ..+..+.....||| |...+.
T Consensus 180 ~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 180 IELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 6899999998443322 233422 22333334578999 988654
No 235
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.12 E-value=0.34 Score=32.34 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=24.6
Q ss_pred ceecCCCCCCCcC-HHHH--Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFD-LVGL--CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D-~~~L--~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.+. ...| |.| |...+.. ....||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVH 61 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHH--HCSSCTTTCCCCC
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHH--cCCcCCCcCcccC
Confidence 6799999999654 3333 444 3322221 1358999988765
No 236
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=68.12 E-value=1.4 Score=32.34 Aligned_cols=10 Identities=30% Similarity=0.962 Sum_probs=9.3
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|.||||+.
T Consensus 34 ~ky~CpfCGk 43 (83)
T 3j21_i 34 QKHTCPVCGR 43 (83)
T ss_dssp SCBCCSSSCS
T ss_pred cccCCCCCCC
Confidence 7899999998
No 237
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=68.06 E-value=0.36 Score=30.21 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=21.7
Q ss_pred eecCCCCCCCcCH----HHH--HhhhhhcCCC---CCCcccccccccCc
Q 029557 48 EYPCPFCSEDFDL----VGL--CCHIDEEHPV---EAKSGVCPVCVTRV 87 (191)
Q Consensus 48 ~F~CPfC~e~~D~----~~L--~~H~~eeH~~---e~k~vVCPICa~~~ 87 (191)
...||.|.+.+.. ..| |.|.-=.++. -.+...||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 4678888886654 222 5553211111 12346799997654
No 238
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=67.63 E-value=1.3 Score=34.35 Aligned_cols=28 Identities=36% Similarity=0.917 Sum_probs=20.9
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~ 87 (191)
..|.|+-||..|+.. .....||.|-..+
T Consensus 131 ~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 131 WRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred EEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 379999999977643 3346999997653
No 239
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.62 E-value=0.57 Score=30.58 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=24.7
Q ss_pred ceecCCCCCCCcCHH--HHHhh-----hhhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLV--GLCCH-----IDEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~--~L~~H-----~~eeH~~e~k~vVCPICa~~~~~ 89 (191)
..|.||.|.+.+... --|.| |..... ......||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHRFCESCMAALL-SSSSPKCTACQESIVK 62 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCCCCHHHHHHHH-TTSSCCCTTTCCCCCT
T ss_pred cCCCCCCCChHhcCeeECCCCCHHHHHHHHHHH-HhCcCCCCCCCcCCCh
Confidence 579999999854432 12333 222221 1445689999887653
No 240
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=67.50 E-value=4.1 Score=27.27 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=23.4
Q ss_pred eecCCCCCCCcCHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.-.|+||+..+-...|-.|.+. + ....+.||
T Consensus 44 ~v~C~~C~~~~~~~~l~~H~~~--C-p~~~v~C~ 74 (76)
T 2yuc_A 44 RLKCEFCGCDFSGEAYESHEGM--C-PQESSGPS 74 (76)
T ss_dssp CCCCSSSCCCCCHHHHHHTTTS--C-TTSSCCCS
T ss_pred ceECCCCCCccCHHHHHHHHhH--C-CCCccCCC
Confidence 6889999999999999999842 2 23345565
No 241
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=67.23 E-value=0.61 Score=32.86 Aligned_cols=40 Identities=28% Similarity=0.558 Sum_probs=25.6
Q ss_pred ceecCCCCCCCcCHH-HH--Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLV-GL--CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-~L--~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|... .+ |.| |...+.. ....||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTVT 68 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBCC
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcCC
Confidence 579999999965543 33 555 3333222 2368999988765
No 242
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=67.23 E-value=1.5 Score=31.76 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=19.1
Q ss_pred ceecCCCCCCC--cCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSED--FDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~--~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|+|||||.+ ++.. .....||-|-..
T Consensus 26 ~~y~Cp~CG~~~v~r~a-------------tGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG-------------TGIWQCSYCDYK 54 (83)
T ss_dssp SCEECSSSCCEEEEEEE-------------TTEEEETTTCCE
T ss_pred ccCcCCCCCCcceeccC-------------CCeEECCCCCCE
Confidence 67999999982 2222 346789999775
No 243
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=66.97 E-value=1.5 Score=32.65 Aligned_cols=10 Identities=40% Similarity=1.145 Sum_probs=9.3
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|+|||||.
T Consensus 35 ~ky~CpfCgk 44 (92)
T 3iz5_m 35 SKYFCEFCGK 44 (92)
T ss_dssp SCBCCTTTCS
T ss_pred ccccCcccCC
Confidence 7899999998
No 244
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=70.11 E-value=1.2 Score=23.10 Aligned_cols=21 Identities=24% Similarity=0.654 Sum_probs=14.9
Q ss_pred eecCCCCCCCc-CHHHHHhhhh
Q 029557 48 EYPCPFCSEDF-DLVGLCCHID 68 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~ 68 (191)
.|.|++|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 37899998855 4566777765
No 245
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=66.33 E-value=1.7 Score=33.13 Aligned_cols=10 Identities=50% Similarity=1.477 Sum_probs=9.3
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|+|||||.
T Consensus 35 aky~CpfCgk 44 (103)
T 4a17_Y 35 AKYGCPFCGK 44 (103)
T ss_dssp SCEECTTTCC
T ss_pred cCCCCCCCCC
Confidence 7899999998
No 246
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.10 E-value=4.7 Score=22.77 Aligned_cols=26 Identities=35% Similarity=0.696 Sum_probs=18.7
Q ss_pred ceecCCCCCCCcC-HHHHHhhhhhcCCC
Q 029557 47 YEYPCPFCSEDFD-LVGLCCHIDEEHPV 73 (191)
Q Consensus 47 ~~F~CPfC~e~~D-~~~L~~H~~eeH~~ 73 (191)
..|.|+.|+..|. ...|..|+. .|..
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQTLKSHLR-IHTG 36 (42)
T ss_dssp CCBCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred CCEECCCCCCccCCHHHHHHHHH-hcCC
Confidence 3599999999554 577888876 4543
No 247
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=69.49 E-value=1.2 Score=22.56 Aligned_cols=21 Identities=33% Similarity=0.611 Sum_probs=14.9
Q ss_pred eecCCCCCCCcC-HHHHHhhhh
Q 029557 48 EYPCPFCSEDFD-LVGLCCHID 68 (191)
Q Consensus 48 ~F~CPfC~e~~D-~~~L~~H~~ 68 (191)
.|.|+.|+..|. ...|..|..
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 388999998654 466777754
No 248
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=65.96 E-value=0.58 Score=36.28 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=25.1
Q ss_pred ceecCCCCCCCcCHHH--HHhh-----hhhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H-----~~eeH~~e~k~vVCPICa~~~~~ 89 (191)
..|.||.|.+.|.... -|.| |...+.. .....||+|...+..
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK-AQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred cCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH-hCCCcCCCCCccCCC
Confidence 6799999998554321 2223 3333322 234589999887664
No 249
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=65.84 E-value=1.6 Score=32.64 Aligned_cols=10 Identities=40% Similarity=1.242 Sum_probs=9.3
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|+||||+.
T Consensus 35 ~ky~CpfCgk 44 (92)
T 3izc_m 35 ARYDCSFCGK 44 (92)
T ss_dssp SCCCCSSSCS
T ss_pred cCCcCCCCCC
Confidence 7899999998
No 250
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.79 E-value=3.8 Score=23.13 Aligned_cols=25 Identities=28% Similarity=0.590 Sum_probs=18.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHP 72 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~ 72 (191)
..|.|++|+..| ....|..|.. .|.
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~-~H~ 35 (42)
T 2en2_A 10 KPYKCETCGARFVQVAHLRAHVL-IHT 35 (42)
T ss_dssp CSEECTTTCCEESSHHHHHHHTH-HHH
T ss_pred CCEeCCCcChhhCCHHHHHHHHH-HcC
Confidence 359999999944 5677888876 343
No 251
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=65.61 E-value=1.8 Score=30.92 Aligned_cols=13 Identities=31% Similarity=0.935 Sum_probs=10.6
Q ss_pred ceecCCCCCC-CcC
Q 029557 47 YEYPCPFCSE-DFD 59 (191)
Q Consensus 47 ~~F~CPfC~e-~~D 59 (191)
..|+||||+. .+-
T Consensus 26 ~ky~C~fCgk~~vk 39 (73)
T 1ffk_W 26 KKYKCPVCGFPKLK 39 (73)
T ss_pred cCccCCCCCCceeE
Confidence 7899999998 443
No 252
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=65.50 E-value=0.26 Score=32.42 Aligned_cols=43 Identities=21% Similarity=0.449 Sum_probs=22.5
Q ss_pred ceecCCCCCCCcCHH-----HHHhhhhhcCCCC---CCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLV-----GLCCHIDEEHPVE---AKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-----~L~~H~~eeH~~e---~k~vVCPICa~~~~~ 89 (191)
....||.|.+.|... --|.|.-=.++.. .+...||+|...+..
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 468899998766421 1144421111110 012469999876643
No 253
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=65.33 E-value=0.92 Score=32.49 Aligned_cols=40 Identities=25% Similarity=0.453 Sum_probs=24.8
Q ss_pred ceecCCCCCCCcCH-HHH--Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDL-VGL--CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~-~~L--~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|.. ..| |.| |...+... ...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET--SKYCPICDVQVH 61 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS--CSBCTTTCCBSC
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh--CCcCcCCCcccc
Confidence 57899999995433 332 444 33333222 378999988765
No 254
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=64.89 E-value=2.3 Score=30.71 Aligned_cols=21 Identities=29% Similarity=0.714 Sum_probs=17.9
Q ss_pred eecCCCCCCCcCHHHHHhhhh
Q 029557 48 EYPCPFCSEDFDLVGLCCHID 68 (191)
Q Consensus 48 ~F~CPfC~e~~D~~~L~~H~~ 68 (191)
.=-||||+--+.-.+|..|+.
T Consensus 30 ~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHHT
T ss_pred cccChhhhccCCccchhhhcc
Confidence 346999999999999999974
No 255
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=64.12 E-value=2.7 Score=26.57 Aligned_cols=22 Identities=23% Similarity=0.452 Sum_probs=18.1
Q ss_pred ceecCCCCCCCcCHHHHHhhhh
Q 029557 47 YEYPCPFCSEDFDLVGLCCHID 68 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~ 68 (191)
..|.||-|++.|.+....+|.+
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 5689999999888888888864
No 256
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.11 E-value=5 Score=23.06 Aligned_cols=24 Identities=29% Similarity=0.455 Sum_probs=18.0
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~ 72 (191)
.|.|+.|+..| ....|..|... |.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~ 36 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT-HA 36 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GS
T ss_pred CeECCCCCcccCchHHHHHHHhH-hc
Confidence 59999999954 56788888764 44
No 257
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=63.81 E-value=4.9 Score=22.39 Aligned_cols=25 Identities=32% Similarity=0.785 Sum_probs=17.8
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
.|.|+.|+..| ....|..|... |..
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 31 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV-HRR 31 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT-TCC
T ss_pred ceECCCCCcccCCHHHHHHHHHH-cCC
Confidence 58999999954 55678888654 543
No 258
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.76 E-value=3.5 Score=26.34 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=19.4
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhhcC
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDEEH 71 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~eeH 71 (191)
..|.|++|+.. .....|..|+...+
T Consensus 41 ~~~~C~~C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 41 KPYKCLECGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHHhcC
Confidence 35999999994 45778999987543
No 259
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.15 E-value=2.8 Score=30.33 Aligned_cols=38 Identities=21% Similarity=0.141 Sum_probs=29.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
..|.|+.|+..| ....|..|....|..+ ++-.|.||-.
T Consensus 49 kpf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~ 87 (102)
T 2ghf_A 49 SSYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKR 87 (102)
T ss_dssp CCEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCC
T ss_pred CCcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccC
Confidence 359999999955 5678999966778765 5678998754
No 260
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=62.51 E-value=1.7 Score=31.35 Aligned_cols=41 Identities=32% Similarity=0.474 Sum_probs=25.5
Q ss_pred ceecCCCCCCCcCHH--HHHhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLV--GLCCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~--~L~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..|.||.|.+.+... --|.| |..... ......||+|...+.
T Consensus 14 ~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 14 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVS 61 (115)
T ss_dssp HHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCH
T ss_pred CCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccC
Confidence 468999999855422 12444 443333 233578999988765
No 261
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=62.37 E-value=0.77 Score=32.61 Aligned_cols=43 Identities=23% Similarity=0.405 Sum_probs=24.3
Q ss_pred ceecCCCCCCCcCHHH--HHhh-----hhhcCCCC-CCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVE-AKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H-----~~eeH~~e-~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.+.... -|.| |...+... .....||+|...+..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 5789999998554321 1333 22222111 223689999887653
No 262
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.25 E-value=4.6 Score=27.01 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=18.5
Q ss_pred eecCCCCCCCcC-HHHHHhhhh
Q 029557 48 EYPCPFCSEDFD-LVGLCCHID 68 (191)
Q Consensus 48 ~F~CPfC~e~~D-~~~L~~H~~ 68 (191)
.|+||=|+..|. ...|..|..
T Consensus 12 ~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 12 RKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHH
T ss_pred ceeCCcccccccchHHHHhhhh
Confidence 699999999888 788999986
No 263
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=62.10 E-value=2.1 Score=33.12 Aligned_cols=29 Identities=28% Similarity=0.570 Sum_probs=19.6
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~ 87 (191)
..|.|||||. .+-... ..--.|+-|-..+
T Consensus 59 akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp SCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred cCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 7899999998 543322 2345688887653
No 264
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=61.97 E-value=5.4 Score=22.34 Aligned_cols=26 Identities=23% Similarity=0.423 Sum_probs=18.9
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
..|.|++|+..| ....|..|... |..
T Consensus 10 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~ 36 (42)
T 2epc_A 10 TPYLCGQCGKSFTQRGSLAVHQRS-CSQ 36 (42)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-TTC
T ss_pred CCeECCCCCcccCCHHHHHHHhhh-cCC
Confidence 359999999954 56778888754 543
No 265
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.84 E-value=0.77 Score=30.46 Aligned_cols=42 Identities=29% Similarity=0.509 Sum_probs=22.5
Q ss_pred ceecCCCCCCCcCHHH-----HHhhhhhcCCCC---CCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVG-----LCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~-----L~~H~~eeH~~e---~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 4578999999764321 144431111110 01238999977653
No 266
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=61.40 E-value=1 Score=32.84 Aligned_cols=42 Identities=31% Similarity=0.459 Sum_probs=25.4
Q ss_pred ceecCCCCCCCc-CHHHH--HhhhhhcCCCCCC-cccccccccCcc
Q 029557 47 YEYPCPFCSEDF-DLVGL--CCHIDEEHPVEAK-SGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L--~~H~~eeH~~e~k-~vVCPICa~~~~ 88 (191)
..+.||.|.+.| +-..| |.|.-=..+.... ...||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 679999999944 33334 5554333332111 168999988654
No 267
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=61.27 E-value=0.62 Score=33.30 Aligned_cols=41 Identities=22% Similarity=0.477 Sum_probs=24.7
Q ss_pred ceecCCCCCCCcCHHHH---Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVGL---CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L---~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|..... |.| |...+.... ...||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~-~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ-RAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT-CSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHC-cCCCCCCCCcCC
Confidence 67999999996654332 333 222221111 268999988765
No 268
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.00 E-value=4 Score=27.98 Aligned_cols=27 Identities=30% Similarity=0.587 Sum_probs=21.9
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
..|.|++|++.| ....|..|+...|..
T Consensus 53 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 53 DALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 359999999955 577899999887754
No 269
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.90 E-value=0.86 Score=30.84 Aligned_cols=41 Identities=27% Similarity=0.460 Sum_probs=23.9
Q ss_pred ceecCCCCCC-CcCHHHH-Hhhh-hhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L-~~H~-~eeH~~e~k~vVCPICa~~~~ 88 (191)
....|+.|.+ .-++.-| |.|. -=..+.. +...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQ 57 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchh
Confidence 3578999998 5554432 4443 1111111 2368999988764
No 270
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=60.42 E-value=0.77 Score=29.18 Aligned_cols=43 Identities=19% Similarity=0.600 Sum_probs=23.8
Q ss_pred ceecCCCCCCCcCHH---------HHHhhhhhcCCCC---CCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVE---AKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~---------~L~~H~~eeH~~e---~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.+... .-|.|.-=..+.. .+...||+|...+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 457899998877653 1244421111110 114589999887653
No 271
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=60.22 E-value=1.7 Score=35.04 Aligned_cols=26 Identities=19% Similarity=0.597 Sum_probs=17.9
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
..|.|+.||--++-. .-+-+||+|.+
T Consensus 154 ~~~~C~~CG~~~~g~-------------~~p~~CP~C~~ 179 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT-------------GAPELCPACAH 179 (191)
T ss_dssp EEEEETTTCCEEEEE-------------ECCSBCTTTCC
T ss_pred ceEEECCCCCEeeCC-------------CCCCCCCCCcC
Confidence 369999999855411 11229999977
No 272
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.09 E-value=1.1 Score=28.82 Aligned_cols=15 Identities=20% Similarity=0.758 Sum_probs=11.8
Q ss_pred ceecCCCCCCCcCHH
Q 029557 47 YEYPCPFCSEDFDLV 61 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~ 61 (191)
..+.||.|.+.+...
T Consensus 14 ~~~~C~IC~~~~~~~ 28 (69)
T 2ea6_A 14 GTVSCPICMDGYSEI 28 (69)
T ss_dssp CCCCCTTTCCCHHHH
T ss_pred CCCCCcccCcccccc
Confidence 568999999977654
No 273
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.92 E-value=4.2 Score=23.49 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=21.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccc
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCP 81 (191)
.|.|++|+..| ....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~ 44 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS-HERT-DPSGPS 44 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-HHHS-CCSSCS
T ss_pred CeeCcccChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 59999999954 56778888754 4322 334454
No 274
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.49 E-value=7.4 Score=24.95 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=19.6
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCC
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPV 73 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~ 73 (191)
.|.|++|+. =-....|..|+.. |..
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~-H~~ 71 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRV-HTG 71 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-SCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC
Confidence 599999999 4467889999865 543
No 275
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=59.29 E-value=5.7 Score=24.03 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=17.4
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhh
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~e 69 (191)
..|.|+.|+..| ....|..|...
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 359999999954 56778888764
No 276
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=58.43 E-value=7.7 Score=25.29 Aligned_cols=27 Identities=26% Similarity=0.517 Sum_probs=20.5
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 75 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~e~ 75 (191)
.|.|+.|+..| ....|..|.. .|..++
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~-~Htgep 59 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLK-VHQNKP 59 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGG-GGSCC-
T ss_pred CeECCCCCCCcCCHHHHHHHhC-ccCCCC
Confidence 59999999954 5688999976 576553
No 277
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=57.90 E-value=5.9 Score=23.41 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=15.7
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhh
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~e 69 (191)
+.|.||.|.. -=|...|..|.++
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHHHH
Confidence 3577777777 6677777777654
No 278
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=57.90 E-value=0.85 Score=32.01 Aligned_cols=42 Identities=33% Similarity=0.612 Sum_probs=23.2
Q ss_pred ceecCCCCCCCcCHH-----HHHhhhhhcCCCC---CCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLV-----GLCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-----~L~~H~~eeH~~e---~k~vVCPICa~~~~ 88 (191)
....||.|.++|... --|.|.-=.++.. .++..||+|...+.
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 457899998765431 1155531111110 13458999987654
No 279
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=57.85 E-value=3 Score=37.08 Aligned_cols=35 Identities=29% Similarity=0.556 Sum_probs=22.9
Q ss_pred CcceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccc-ccCcccchH
Q 029557 45 GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVC-VTRVTMDMV 92 (191)
Q Consensus 45 ~~~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPIC-a~~~~~d~v 92 (191)
|.+.-.|||||.-+.. +-+.-+|||| ...||.+-+
T Consensus 275 g~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~ 310 (320)
T 3mkr_B 275 GKPVEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVI 310 (320)
T ss_dssp TSCCEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCC
T ss_pred CCCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCccc
Confidence 3456799999984422 2345699999 446776543
No 280
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=57.21 E-value=8.8 Score=25.83 Aligned_cols=36 Identities=28% Similarity=0.269 Sum_probs=24.0
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
-.|.|+.|++.| ....|..|... |..+ ...|-+|..
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~-Htg~--~~~~~~~~~ 48 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQ-HGVT--SLQLGYIDL 48 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHH-HTTT--SCCCCSCCC
T ss_pred cCcCCCCCCCccCCHHHHHhhhhh-hCCC--ccccccccC
Confidence 359999999955 45678889876 5443 335555544
No 281
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=56.24 E-value=3.1 Score=37.08 Aligned_cols=35 Identities=6% Similarity=0.210 Sum_probs=22.5
Q ss_pred cCcceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccc-ccCcccch
Q 029557 44 KGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVC-VTRVTMDM 91 (191)
Q Consensus 44 ~~~~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPIC-a~~~~~d~ 91 (191)
+|.+.-.|||||.-+.. +-+.-+|||| ...||.+-
T Consensus 283 ~g~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a 318 (325)
T 3mv2_A 283 EDTPSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPA 318 (325)
T ss_dssp SSSCEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCC
T ss_pred CCCCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCc
Confidence 34467789999984421 2345699999 44666543
No 282
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=56.21 E-value=3.7 Score=22.15 Aligned_cols=20 Identities=35% Similarity=0.770 Sum_probs=13.2
Q ss_pred ecCCCCCCCcCH-HHHHhhhh
Q 029557 49 YPCPFCSEDFDL-VGLCCHID 68 (191)
Q Consensus 49 F~CPfC~e~~D~-~~L~~H~~ 68 (191)
|.|+.|+..|.. ..|..|..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 778888886554 44566654
No 283
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=55.77 E-value=0.72 Score=30.11 Aligned_cols=41 Identities=20% Similarity=0.648 Sum_probs=23.9
Q ss_pred ceecCCCCCCCcCHH---------HHHhhh-----hhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLV---------GLCCHI-----DEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~---------~L~~H~-----~eeH~~e~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.+... --|.|. ...... +...||+|...+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINH 63 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCCBCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--cCCCCCCCCCccCh
Confidence 458899999977653 113342 221111 12489999887653
No 284
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=52.92 E-value=0.55 Score=33.74 Aligned_cols=13 Identities=38% Similarity=0.539 Sum_probs=9.4
Q ss_pred CcccccccccCcc
Q 029557 76 KSGVCPVCVTRVT 88 (191)
Q Consensus 76 k~vVCPICa~~~~ 88 (191)
+...||+|.+.+.
T Consensus 81 ~~~~CP~CR~~~~ 93 (114)
T 1v87_A 81 GSLQCPSCKTIYG 93 (114)
T ss_dssp SCCBCTTTCCBSS
T ss_pred CCCcCCCCCCccC
Confidence 4568999987543
No 285
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.78 E-value=10 Score=26.36 Aligned_cols=26 Identities=23% Similarity=0.658 Sum_probs=21.2
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
.|.|+.|++.| ....|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 59999999966 467899997778853
No 286
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=52.64 E-value=2.4 Score=28.64 Aligned_cols=41 Identities=29% Similarity=0.592 Sum_probs=22.9
Q ss_pred ceecCCCCCCCc-CHHHH-Hhhh-hhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDF-DLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L-~~H~-~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.+ +...| |.|. -=..+.. +...||+|...+.
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~ 66 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAE-AVDKCPMCYTVIT 66 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTCCBCCCHHHHT-TCSBCTTTCCBCS
T ss_pred cCCCCCCCCCCCCCEEEcCCCChhHHHHhhh-cCccCCCcCcCcc
Confidence 678999999944 33321 3332 1111111 1178999988765
No 287
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=52.40 E-value=13 Score=19.31 Aligned_cols=22 Identities=23% Similarity=0.538 Sum_probs=16.2
Q ss_pred eecCC--CCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCP--FCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CP--fC~e~~-D~~~L~~H~~e 69 (191)
.|.|+ .|+..| ....|..|...
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 37897 899955 56778888754
No 288
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=51.82 E-value=5.2 Score=32.65 Aligned_cols=26 Identities=27% Similarity=0.640 Sum_probs=18.7
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|.|+.||--++ + ..+-+||+|...
T Consensus 170 ~~~~C~~CG~i~~--g------------~~p~~CP~C~~~ 195 (202)
T 1yuz_A 170 KFHLCPICGYIHK--G------------EDFEKCPICFRP 195 (202)
T ss_dssp CEEECSSSCCEEE--S------------SCCSBCTTTCCB
T ss_pred cEEEECCCCCEEc--C------------cCCCCCCCCCCC
Confidence 4799999998554 1 123799999763
No 289
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=50.91 E-value=1.9 Score=35.87 Aligned_cols=39 Identities=26% Similarity=0.506 Sum_probs=25.6
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCC-CCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHP-VEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~-~e~k~vVCPICa~~~~ 88 (191)
-+|.||.|+..+...++.. .... ....-..||-|...++
T Consensus 21 l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~ 60 (206)
T 3flo_B 21 LELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFT 60 (206)
T ss_dssp EEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCC
T ss_pred eEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCC
Confidence 3699999998665555542 1111 2445678999988765
No 290
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.14 E-value=4.8 Score=23.00 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=17.0
Q ss_pred ceecCCCCCCC-cCHHHHHhhhhh
Q 029557 47 YEYPCPFCSED-FDLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~-~D~~~L~~H~~e 69 (191)
..|.|+.|+.. -....|..|...
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 11 KSYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CCEEETTTTEEESSSHHHHTTHHH
T ss_pred CCeECcccCcccCCHHHHHHHHHH
Confidence 35899999994 455778888764
No 291
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=49.85 E-value=7.9 Score=32.20 Aligned_cols=24 Identities=33% Similarity=0.627 Sum_probs=21.1
Q ss_pred ceecCCCCCCCc--CHHHHHhhhhhc
Q 029557 47 YEYPCPFCSEDF--DLVGLCCHIDEE 70 (191)
Q Consensus 47 ~~F~CPfC~e~~--D~~~L~~H~~ee 70 (191)
..+.|..|+.+| .+..|-.|++++
T Consensus 168 ~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 168 EDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp SCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCceeCCCCchhhcccHHHHHHHHHH
Confidence 579999999977 499999999875
No 292
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=49.31 E-value=12 Score=26.31 Aligned_cols=26 Identities=23% Similarity=0.577 Sum_probs=21.1
Q ss_pred eecCCCCCCCc-CHHHHHhhhhhcCCC
Q 029557 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (191)
Q Consensus 48 ~F~CPfC~e~~-D~~~L~~H~~eeH~~ 73 (191)
.|.|++|+..| ....|..|+...|..
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 59999999955 567899999887743
No 293
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=47.48 E-value=1.3 Score=33.64 Aligned_cols=54 Identities=22% Similarity=0.329 Sum_probs=30.9
Q ss_pred ecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCcc-------cchHhhhhcccccchhhh
Q 029557 49 YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-------MDMVDHITTQHGNISNSW 106 (191)
Q Consensus 49 F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~-------~d~v~Hl~~qH~~~~K~~ 106 (191)
-.||-|..+++..+=.-||..=+..=.+.+.||-|...+- .|+. =+|++-+|++
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYF----C~~chgLiSK 93 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYF----CQHGHGLISK 93 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEE----ETTTTEEECT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchh----hccCCceeec
Confidence 4677777665544323333333333345688999988653 3554 2577777754
No 294
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=47.20 E-value=1 Score=34.71 Aligned_cols=41 Identities=22% Similarity=0.507 Sum_probs=25.1
Q ss_pred ceecCCCCCCCcCHH-HH--Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLV-GL--CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~-~L--~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|... .+ |.| |..... ......||+|...+.
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITAL-RSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHH-HTTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHH-HhCcCCCCCCCCcCC
Confidence 679999999955543 22 444 222222 123568999988763
No 295
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=46.99 E-value=7.2 Score=28.96 Aligned_cols=27 Identities=33% Similarity=0.566 Sum_probs=20.4
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcc-cccccccC
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSG-VCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~v-VCPICa~~ 86 (191)
..|.|+-||..|... .... .||.|...
T Consensus 72 ~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 579999999977651 2356 89999764
No 296
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=46.67 E-value=1.1 Score=33.64 Aligned_cols=40 Identities=35% Similarity=0.652 Sum_probs=23.8
Q ss_pred ceecCCCCCCCcCH-HHH-Hhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDL-VGL-CCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~-~~L-~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.|.. ..| |.| |..... .+...||+|...+.
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDIK 98 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHT--TTCSBCTTTCCBCC
T ss_pred ccCCCcccCcccCCceECCCCCCccHHHHHHHH--HcCCcCCCCCCcCC
Confidence 46899999995433 222 444 333222 23457999987654
No 297
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=46.25 E-value=8.1 Score=25.48 Aligned_cols=10 Identities=30% Similarity=1.178 Sum_probs=7.6
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|.||.|+.
T Consensus 35 ~dw~CP~Cg~ 44 (52)
T 1e8j_A 35 DDWACPVCGA 44 (52)
T ss_dssp TTCCCSSSCC
T ss_pred CCCcCCCCCC
Confidence 5678888876
No 298
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=45.46 E-value=7.8 Score=28.80 Aligned_cols=38 Identities=24% Similarity=0.439 Sum_probs=27.7
Q ss_pred ecCCCCCCCcCHHHHHhhhhhcCCCC----CC----------cccccccccC
Q 029557 49 YPCPFCSEDFDLVGLCCHIDEEHPVE----AK----------SGVCPVCVTR 86 (191)
Q Consensus 49 F~CPfC~e~~D~~~L~~H~~eeH~~e----~k----------~vVCPICa~~ 86 (191)
-.||.||+-+|-.+|+.-+-..-.++ -+ .-.||+|-.-
T Consensus 9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEE 60 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEE 60 (95)
T ss_dssp EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCE
T ss_pred ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHH
Confidence 57999999999999998776554431 11 2349999763
No 299
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=45.06 E-value=7.7 Score=22.99 Aligned_cols=19 Identities=26% Similarity=0.602 Sum_probs=11.6
Q ss_pred ccccccccc-CcccchHhhh
Q 029557 77 SGVCPVCVT-RVTMDMVDHI 95 (191)
Q Consensus 77 ~vVCPICa~-~~~~d~v~Hl 95 (191)
.|-||||-. +|...+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 377999965 4444454554
No 300
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=44.85 E-value=15 Score=20.19 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=16.8
Q ss_pred ceecCCC--CCCCc-CHHHHHhhhhh
Q 029557 47 YEYPCPF--CSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPf--C~e~~-D~~~L~~H~~e 69 (191)
..|.|++ |+..| ....|..|...
T Consensus 7 k~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 7 KQHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 3599986 99955 56678888653
No 301
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=43.97 E-value=6 Score=28.62 Aligned_cols=12 Identities=25% Similarity=0.766 Sum_probs=9.1
Q ss_pred ecCCCCCCCcCH
Q 029557 49 YPCPFCSEDFDL 60 (191)
Q Consensus 49 F~CPfC~e~~D~ 60 (191)
=+||.||..++.
T Consensus 48 ~~CPvCgs~l~~ 59 (112)
T 1l8d_A 48 GKCPVCGRELTD 59 (112)
T ss_dssp EECTTTCCEECH
T ss_pred CCCCCCCCcCCH
Confidence 379999987763
No 302
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=43.78 E-value=17 Score=22.14 Aligned_cols=13 Identities=38% Similarity=0.818 Sum_probs=9.4
Q ss_pred ceecCCCCCCCcC
Q 029557 47 YEYPCPFCSEDFD 59 (191)
Q Consensus 47 ~~F~CPfC~e~~D 59 (191)
..+.||.|.+.+.
T Consensus 4 ~~~~C~IC~~~~~ 16 (55)
T 2ecm_A 4 GSSGCPICLEDIH 16 (55)
T ss_dssp CCCSCTTTCCCCC
T ss_pred CCCcCcccChhhc
Confidence 3577899988663
No 303
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=43.57 E-value=7.7 Score=32.73 Aligned_cols=25 Identities=28% Similarity=0.472 Sum_probs=22.7
Q ss_pred ccCcceecCCCCCCCcCHHHHHhhhhh
Q 029557 43 VKGEYEYPCPFCSEDFDLVGLCCHIDE 69 (191)
Q Consensus 43 ~~~~~~F~CPfC~e~~D~~~L~~H~~e 69 (191)
.| +-|.|-.||+-+|+..|..|+..
T Consensus 151 FW--QFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 151 FW--QFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EE--EEEECTTTCCEEEGGGHHHHHHT
T ss_pred EE--EEEehhhcCceecHHHHHHHHHH
Confidence 46 89999999999999999999875
No 304
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=42.84 E-value=17 Score=18.78 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=16.3
Q ss_pred eecCC--CCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCP--FCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CP--fC~e~~-D~~~L~~H~~e 69 (191)
.|.|+ .|+..| ....|..|...
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 48898 799955 46778888754
No 305
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.61 E-value=14 Score=21.99 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=17.4
Q ss_pred eecCCC--CCC-CcCHHHHHhhhhh
Q 029557 48 EYPCPF--CSE-DFDLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPf--C~e-~~D~~~L~~H~~e 69 (191)
.|.|++ |+. =.....|..|+..
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 599987 999 4577788899754
No 306
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=42.29 E-value=6.3 Score=28.09 Aligned_cols=36 Identities=17% Similarity=0.453 Sum_probs=23.8
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~ 87 (191)
....||.|...++...+..- ........||||-...
T Consensus 47 ~~~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~ 82 (133)
T 4ap4_A 47 NANTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGY 82 (133)
T ss_dssp TCSBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBH
T ss_pred hCCCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCcc
Confidence 34689999998876544321 2245567899997654
No 307
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=42.13 E-value=11 Score=26.12 Aligned_cols=29 Identities=24% Similarity=0.434 Sum_probs=22.2
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~ 87 (191)
-.|.|.-|+.++++. ....+.||-|..+|
T Consensus 20 v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 469999999987743 23568999997665
No 308
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.12 E-value=3.3 Score=27.84 Aligned_cols=42 Identities=26% Similarity=0.562 Sum_probs=23.3
Q ss_pred ceecCCCCCCCc-CHHHH-Hhhh-hhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDF-DLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L-~~H~-~eeH~~e~k~vVCPICa~~~~~ 89 (191)
..+.||.|.+.+ +...| |.|. -=..+. .+...||+|...+..
T Consensus 24 ~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceecC
Confidence 678999999844 33321 3332 101111 123689999887643
No 309
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=41.44 E-value=12 Score=22.25 Aligned_cols=21 Identities=24% Similarity=0.380 Sum_probs=16.7
Q ss_pred ceecCCCCCCCc-CHHHHHhhh
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHI 67 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~ 67 (191)
-.|.|+.|++.| ....|..|.
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHH
T ss_pred cCeECCCCCCccCCHhHccCcC
Confidence 469999999955 467788887
No 310
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=40.73 E-value=3.9 Score=30.35 Aligned_cols=14 Identities=29% Similarity=0.544 Sum_probs=11.2
Q ss_pred ceecCCCCCCCcCH
Q 029557 47 YEYPCPFCSEDFDL 60 (191)
Q Consensus 47 ~~F~CPfC~e~~D~ 60 (191)
+.+.|+|||..++.
T Consensus 34 ~~~~C~yCg~~~~~ 47 (112)
T 2qgp_A 34 ARGICHYCGEIFPP 47 (112)
T ss_dssp HHTBCTTTCCBCCG
T ss_pred cCCcCCCCCCcCCC
Confidence 45899999997764
No 311
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=40.63 E-value=3.1 Score=29.98 Aligned_cols=44 Identities=16% Similarity=0.199 Sum_probs=24.8
Q ss_pred ccCcceecCCCCCCCcCHHH--HHhh-----hhhcCCCCCCcccccccccCccc
Q 029557 43 VKGEYEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 43 ~~~~~~F~CPfC~e~~D~~~--L~~H-----~~eeH~~e~k~vVCPICa~~~~~ 89 (191)
+. ..|.||.|.+.+.... -|.| |...+... ....||+|...+..
T Consensus 20 ~~--~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 20 FV--KSISCQICEHILADPVETSCKHLFCRICILRCLKV-MGSYCPSCRYPCFP 70 (116)
T ss_dssp HH--HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-TCSBCTTTCCBCCG
T ss_pred cc--CCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhH-CcCcCCCCCCCCCH
Confidence 55 6799999999554321 1222 11111111 13579999887653
No 312
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=40.52 E-value=19 Score=19.51 Aligned_cols=22 Identities=23% Similarity=0.561 Sum_probs=15.5
Q ss_pred eecCCC--CCCCc-CHHHHHhhhhh
Q 029557 48 EYPCPF--CSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CPf--C~e~~-D~~~L~~H~~e 69 (191)
.|.|++ |+..| ....|..|...
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 588995 98844 55667788653
No 313
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=40.52 E-value=14 Score=18.39 Aligned_cols=22 Identities=32% Similarity=0.490 Sum_probs=15.5
Q ss_pred eecCC--CCCCCc-CHHHHHhhhhh
Q 029557 48 EYPCP--FCSEDF-DLVGLCCHIDE 69 (191)
Q Consensus 48 ~F~CP--fC~e~~-D~~~L~~H~~e 69 (191)
.|.|+ .|+..| ....|..|...
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 37888 898844 55677788653
No 314
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.93 E-value=3.8 Score=26.65 Aligned_cols=40 Identities=23% Similarity=0.471 Sum_probs=24.1
Q ss_pred ceecCCCCCCCcCHHH-HHhh-----hhhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSEDFDLVG-LCCH-----IDEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~-L~~H-----~~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+.+.... -|.| |...... +...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGRADLILPCAHSFCQKCIDKWSD--RHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSCCSEEETTTEEECHHHHHHSSC--CCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCccCcccCCCCcccHHHHHHHHH--CcCcCCCcCCccc
Confidence 5689999999544322 2444 3333222 4678999977654
No 315
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=39.60 E-value=3.7 Score=29.81 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=23.4
Q ss_pred ceecCCCCCCCcCHHH--HHhh-----hhhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~--L~~H-----~~eeH~~e~k~vVCPICa~~~~~ 89 (191)
..|.||.|.+.+.... -|.| |...... .....||+|...+..
T Consensus 17 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMALREAVQTPCGHRFCKACIIKSIR-DAGHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH-HHCSBCTTTCCBCCG
T ss_pred CCCCCCcCChhhcCeEECCcCChhhHHHHHHHHh-hCCCCCCCCCCCcCH
Confidence 6799999999554321 1333 2221111 112389999887653
No 316
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=38.97 E-value=6.4 Score=29.74 Aligned_cols=37 Identities=22% Similarity=0.457 Sum_probs=0.0
Q ss_pred cCCCCCCCcCHHH--------------------HHhhhhhcCCCCC---CcccccccccC
Q 029557 50 PCPFCSEDFDLVG--------------------LCCHIDEEHPVEA---KSGVCPVCVTR 86 (191)
Q Consensus 50 ~CPfC~e~~D~~~--------------------L~~H~~eeH~~e~---k~vVCPICa~~ 86 (191)
.|+.|-+.|+... -|.|.--.|+... ++..||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 6888888776431 4778777777644 35689999764
No 317
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.06 E-value=24 Score=25.09 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=21.7
Q ss_pred eecCCC--CCCCc-CHHHHHhhhhhcCCCCC
Q 029557 48 EYPCPF--CSEDF-DLVGLCCHIDEEHPVEA 75 (191)
Q Consensus 48 ~F~CPf--C~e~~-D~~~L~~H~~eeH~~e~ 75 (191)
-|.|++ |+.-| ....|..|+...|..+.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgEK 57 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDL 57 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCCC
Confidence 499977 99955 55678999887887644
No 318
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=37.87 E-value=5.5 Score=25.26 Aligned_cols=35 Identities=20% Similarity=0.481 Sum_probs=22.1
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcccchH
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMV 92 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~~d~v 92 (191)
..+.||.|+. .+.. . .+....||+.|-..+..+.+
T Consensus 4 ~~~~CP~C~~~~l~~---------d--~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 4 KQKVCPACESAELIY---------D--PERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp SCCSCTTTSCCCEEE---------E--TTTTEEEESSSCCBCCCCCC
T ss_pred ccEeCcCCCCcceEE---------c--CCCCeEECcccCCccccccc
Confidence 4688999977 4311 1 14556899999765544443
No 319
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=35.97 E-value=13 Score=24.51 Aligned_cols=12 Identities=25% Similarity=1.010 Sum_probs=10.1
Q ss_pred ccCcceecCCCCCC
Q 029557 43 VKGEYEYPCPFCSE 56 (191)
Q Consensus 43 ~~~~~~F~CPfC~e 56 (191)
+. ..|.||.|+.
T Consensus 32 lP--~dw~CP~Cg~ 43 (52)
T 1yk4_A 32 LP--DDWVCPLCGA 43 (52)
T ss_dssp SC--TTCBCTTTCC
T ss_pred CC--CCCcCCCCCC
Confidence 55 6799999998
No 320
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.41 E-value=1.7 Score=28.94 Aligned_cols=41 Identities=27% Similarity=0.545 Sum_probs=23.5
Q ss_pred eecCCCCCCCcCHH----HH-HhhhhhcCCCCC---CcccccccccCcc
Q 029557 48 EYPCPFCSEDFDLV----GL-CCHIDEEHPVEA---KSGVCPVCVTRVT 88 (191)
Q Consensus 48 ~F~CPfC~e~~D~~----~L-~~H~~eeH~~e~---k~vVCPICa~~~~ 88 (191)
...||.|.+.|... .| |.|.-=.++... ++..||+|...+.
T Consensus 23 ~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp CCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 46899999866533 12 666422222211 2357999987654
No 321
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=34.60 E-value=12 Score=29.66 Aligned_cols=27 Identities=30% Similarity=0.806 Sum_probs=18.5
Q ss_pred eecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 48 ~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
.=+||-|+.++.- .+....|||-|+--
T Consensus 27 lP~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 27 LPPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp SCCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred CCCCCCCCCcceE------------ecCCeEECCccccc
Confidence 4579999876542 14556899999764
No 322
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=34.27 E-value=5.3 Score=35.27 Aligned_cols=41 Identities=22% Similarity=0.552 Sum_probs=26.4
Q ss_pred ceecCCCCCC-CcCHHHH-Hhhh-hhcCCCCCCcccccccccCcc
Q 029557 47 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L-~~H~-~eeH~~e~k~vVCPICa~~~~ 88 (191)
..+.||.|.+ -.+..-| |.|. -=..+... ...||+|...+.
T Consensus 294 ~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~ 337 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIK 337 (345)
T ss_dssp TTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCC
T ss_pred CCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCcc
Confidence 5799999999 4444443 6665 33333322 268999988764
No 323
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=34.22 E-value=13 Score=24.66 Aligned_cols=12 Identities=25% Similarity=0.830 Sum_probs=10.0
Q ss_pred ccCcceecCCCCCC
Q 029557 43 VKGEYEYPCPFCSE 56 (191)
Q Consensus 43 ~~~~~~F~CPfC~e 56 (191)
+. ..|.||.|+.
T Consensus 33 lP--~dw~CP~Cga 44 (55)
T 2v3b_B 33 IP--ADWVCPDCGV 44 (55)
T ss_dssp SC--TTCCCTTTCC
T ss_pred CC--CCCcCCCCCC
Confidence 55 6799999998
No 324
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=33.33 E-value=10 Score=26.25 Aligned_cols=28 Identities=7% Similarity=0.054 Sum_probs=19.7
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp CCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999998554321 235689999954
No 325
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=33.24 E-value=8.9 Score=25.48 Aligned_cols=31 Identities=26% Similarity=0.492 Sum_probs=16.3
Q ss_pred eecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccCc
Q 029557 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (191)
Q Consensus 48 ~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~ 87 (191)
.|.|==||..|+..+|-. .-.+.||+|--++
T Consensus 3 iY~C~rCg~~fs~~el~~---------lP~IrCpyCGyri 33 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKV---------LPGVRCPYCGYKI 33 (48)
T ss_dssp --CCCCTTTTCCCCCSCC---------CSSSCCTTTCCSC
T ss_pred EEEeeccCCCccHHHHhh---------CCCcccCccCcEE
Confidence 566777777666554421 1235677775554
No 326
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=33.19 E-value=11 Score=26.21 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=19.9
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 7 EILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp EECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6889999998554321 245689999954
No 327
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=32.89 E-value=15 Score=29.51 Aligned_cols=50 Identities=22% Similarity=0.472 Sum_probs=0.0
Q ss_pred eecCCC----CCCCcCHHHHHhhhhhcCCCCCCcccccc----cccC-cccchHhhhhcccc
Q 029557 48 EYPCPF----CSEDFDLVGLCCHIDEEHPVEAKSGVCPV----CVTR-VTMDMVDHITTQHG 100 (191)
Q Consensus 48 ~F~CPf----C~e~~D~~~L~~H~~eeH~~e~k~vVCPI----Ca~~-~~~d~v~Hl~~qH~ 100 (191)
.|+||| |.+-+.-.+...|-+. -.-++-.||+ |.-. ...++..|+...|+
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~~---C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~~H~ 64 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEEL---CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK 64 (193)
T ss_dssp ---------------------------------CEECCCC--CCCCEECSTTHHHHHHHHCT
T ss_pred EecCCCCCCCCCcccccccccchhhc---CCCCCccCCCCCCCCcCCCCHHHHHHHHHHHCC
No 328
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.63 E-value=16 Score=25.83 Aligned_cols=16 Identities=13% Similarity=0.235 Sum_probs=13.1
Q ss_pred cchHhhhhcccccchh
Q 029557 89 MDMVDHITTQHGNISN 104 (191)
Q Consensus 89 ~d~v~Hl~~qH~~~~K 104 (191)
.+|.+||...|..-|+
T Consensus 49 S~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 49 TALWKHLKSMHREELE 64 (76)
T ss_dssp CHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCHHHHH
Confidence 5888888888888776
No 329
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=31.42 E-value=3.4 Score=28.52 Aligned_cols=42 Identities=29% Similarity=0.501 Sum_probs=24.8
Q ss_pred ceecCCCCCC-CcCHHHH-Hhhh-hhcCCCCCCcccccccccCccc
Q 029557 47 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVTM 89 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L-~~H~-~eeH~~e~k~vVCPICa~~~~~ 89 (191)
....|+.|.+ ..+..-| |.|. -=..+.. +...||+|...+..
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAA-QLQSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHT-TCSBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHH-hcCcCCCCCchhhC
Confidence 5678999998 5554443 4444 1111211 11399999887754
No 330
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=31.09 E-value=17 Score=25.19 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=20.8
Q ss_pred ccCcceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 43 VKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 43 ~~~~~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
+. ....||.|.-.+.... +....+||-|..
T Consensus 7 LL--eiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 7 LL--EVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp GT--CCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HH--HHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 55 7889999988554321 245689999954
No 331
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=31.06 E-value=17 Score=25.38 Aligned_cols=12 Identities=25% Similarity=0.841 Sum_probs=10.1
Q ss_pred ccCcceecCCCCCC
Q 029557 43 VKGEYEYPCPFCSE 56 (191)
Q Consensus 43 ~~~~~~F~CPfC~e 56 (191)
+. ..|.||.|+.
T Consensus 37 lP--ddw~CP~Cga 48 (70)
T 1dx8_A 37 LS--DSFMCPACRS 48 (70)
T ss_dssp SC--TTCBCTTTCC
T ss_pred CC--CCCcCCCCCC
Confidence 55 6799999998
No 332
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=30.62 E-value=12 Score=25.95 Aligned_cols=28 Identities=14% Similarity=0.292 Sum_probs=19.8
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
....||.|.-.+.... +....+||-|..
T Consensus 7 eiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (69)
T 2pk7_A 7 DILACPICKGPLKLSA-----------DKTELISKGAGL 34 (69)
T ss_dssp GTCCCTTTCCCCEECT-----------TSSEEEETTTTE
T ss_pred hheeCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999998654321 235689999954
No 333
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=30.36 E-value=12 Score=26.15 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=19.7
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 7 DILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 6789999998554321 235689999954
No 334
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=29.67 E-value=19 Score=24.06 Aligned_cols=11 Identities=27% Similarity=1.011 Sum_probs=9.3
Q ss_pred ceecCCCCCCC
Q 029557 47 YEYPCPFCSED 57 (191)
Q Consensus 47 ~~F~CPfC~e~ 57 (191)
..|.||-|+..
T Consensus 35 ~dw~CP~Cg~~ 45 (54)
T 4rxn_A 35 DDWVCPLCGVG 45 (54)
T ss_dssp TTCBCTTTCCB
T ss_pred CCCcCcCCCCc
Confidence 67999999983
No 335
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=29.49 E-value=16 Score=26.33 Aligned_cols=10 Identities=30% Similarity=1.029 Sum_probs=8.8
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|.||.|+.
T Consensus 59 ddW~CPvCga 68 (81)
T 2kn9_A 59 DDWSCPDCGA 68 (81)
T ss_dssp TTCCCTTTCC
T ss_pred CCCcCCCCCC
Confidence 6789999998
No 336
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=29.11 E-value=5.7 Score=29.33 Aligned_cols=10 Identities=30% Similarity=1.284 Sum_probs=8.5
Q ss_pred ceecCCCCCC
Q 029557 47 YEYPCPFCSE 56 (191)
Q Consensus 47 ~~F~CPfC~e 56 (191)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 4699999986
No 337
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=28.99 E-value=3.2 Score=30.57 Aligned_cols=10 Identities=30% Similarity=0.597 Sum_probs=7.6
Q ss_pred cccccccccC
Q 029557 77 SGVCPVCVTR 86 (191)
Q Consensus 77 ~vVCPICa~~ 86 (191)
+..||+|...
T Consensus 89 ~~~CP~Cr~~ 98 (106)
T 3dpl_R 89 RQVCPLDNRE 98 (106)
T ss_dssp CSBCSSSCSB
T ss_pred CCcCcCCCCc
Confidence 4679999765
No 338
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=28.42 E-value=25 Score=26.37 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=29.5
Q ss_pred cceecCCCCCC--CcCH---HHHHhhhhhcCCCCCCc------ccccccccC
Q 029557 46 EYEYPCPFCSE--DFDL---VGLCCHIDEEHPVEAKS------GVCPVCVTR 86 (191)
Q Consensus 46 ~~~F~CPfC~e--~~D~---~~L~~H~~eeH~~e~k~------vVCPICa~~ 86 (191)
|.-|-|--||+ +|+. ..+...+...+-+.... ++||-|..+
T Consensus 85 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 136 (139)
T 3mwm_A 85 HHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGA 136 (139)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC
T ss_pred ccEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCc
Confidence 35699999999 7764 34566777777765442 889999764
No 339
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.77 E-value=32 Score=23.70 Aligned_cols=52 Identities=17% Similarity=0.317 Sum_probs=33.5
Q ss_pred ceecCCCCCCCc-CHHHHHhhhhhcCCCCCCcccccccccCcccchHhhhhcccccc
Q 029557 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNI 102 (191)
Q Consensus 47 ~~F~CPfC~e~~-D~~~L~~H~~eeH~~e~k~vVCPICa~~~~~d~v~Hl~~qH~~~ 102 (191)
..|.|++|+..| ....|..|... |..+ +.-.|..|..+ ..++.|....-|.+
T Consensus 24 kpy~C~~C~k~F~~~~~L~~H~~~-Ht~e-kp~~C~~~~~~--~~~~~~~~~~~~~~ 76 (88)
T 1x6f_A 24 STYQCKHCDSKLQSTAELTSHLNI-HNEE-FQKRAKRQERR--KQLLSKQKYADGAF 76 (88)
T ss_dssp SCEECSSSCCEESSHHHHHHHHHH-HHHH-HHHHCCCCSCC--CCCCCCCCCCCCSS
T ss_pred CCCcCCCCCCEeCCHHHHHHHHHH-hCCC-CCcccchhhhH--HHHHhhhccccccc
Confidence 359999999954 55778888764 5332 44567776532 35666665555554
No 340
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.39 E-value=3.5 Score=28.26 Aligned_cols=10 Identities=30% Similarity=0.880 Sum_probs=7.4
Q ss_pred ccccccccCc
Q 029557 78 GVCPVCVTRV 87 (191)
Q Consensus 78 vVCPICa~~~ 87 (191)
..||+|...+
T Consensus 65 ~~CP~CR~~~ 74 (81)
T 2ecl_A 65 NRCPLCQQDW 74 (81)
T ss_dssp CBCTTTCCBC
T ss_pred CCCCCcCCCc
Confidence 4899997654
No 341
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.95 E-value=22 Score=20.71 Aligned_cols=23 Identities=22% Similarity=0.532 Sum_probs=15.4
Q ss_pred ceecCC--CCCCCcC-HHHHHhhhhh
Q 029557 47 YEYPCP--FCSEDFD-LVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CP--fC~e~~D-~~~L~~H~~e 69 (191)
-.|.|+ .|+..|. ...|..|...
T Consensus 17 k~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 17 KTFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp TEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHH
Confidence 359996 5999554 4567777653
No 342
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=26.70 E-value=8.2 Score=23.55 Aligned_cols=9 Identities=33% Similarity=0.874 Sum_probs=7.5
Q ss_pred ccccccccC
Q 029557 78 GVCPVCVTR 86 (191)
Q Consensus 78 vVCPICa~~ 86 (191)
-+||+|.+.
T Consensus 17 ~~CP~CtA~ 25 (32)
T 2bai_A 17 EECPKCSAL 25 (32)
T ss_dssp GGHHHHHCS
T ss_pred cccccccee
Confidence 689999874
No 343
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=26.59 E-value=18 Score=27.34 Aligned_cols=41 Identities=20% Similarity=0.520 Sum_probs=25.3
Q ss_pred cceecCCCCCC--CcCH---HHHHhhhhhcCCCCCC------cccccccccC
Q 029557 46 EYEYPCPFCSE--DFDL---VGLCCHIDEEHPVEAK------SGVCPVCVTR 86 (191)
Q Consensus 46 ~~~F~CPfC~e--~~D~---~~L~~H~~eeH~~e~k------~vVCPICa~~ 86 (191)
|.-|-|--||+ +++. ..+...+...+-+... .++||-|..+
T Consensus 88 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 139 (145)
T 3eyy_A 88 HIHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCESCSLK 139 (145)
T ss_dssp SEEEEESSSSCEEEECGGGGHHHHHHHHHHTCEEECSCSSCEEEEECC----
T ss_pred ceEEEECCCCCEEEecCccHHHHHHHHHHhCCCEEEeEEEEEEEECHHHhCc
Confidence 36799999999 7764 3456666655555322 2889999764
No 344
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=26.55 E-value=14 Score=24.59 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=22.9
Q ss_pred eecCCCCCC-CcCHHHHHhhhhhcCCCCCCcccccccccCcccchHh
Q 029557 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVD 93 (191)
Q Consensus 48 ~F~CPfC~e-~~D~~~L~~H~~eeH~~e~k~vVCPICa~~~~~d~v~ 93 (191)
...||.|+. .+ ...| +...+||..|-..+..+.+.
T Consensus 11 ~~~Cp~C~~~~l---------v~D~--~~ge~vC~~CGlVl~e~~iD 46 (58)
T 1dl6_A 11 RVTCPNHPDAIL---------VEDY--RAGDMICPECGLVVGDRVID 46 (58)
T ss_dssp CCSBTTBSSSCC---------EECS--SSCCEECTTTCCEECCSCCC
T ss_pred cccCcCCCCCce---------eEeC--CCCeEEeCCCCCEEeccccc
Confidence 457999987 43 1122 45569999997766655543
No 345
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=25.73 E-value=22 Score=26.02 Aligned_cols=12 Identities=25% Similarity=0.830 Sum_probs=9.9
Q ss_pred ccCcceecCCCCCC
Q 029557 43 VKGEYEYPCPFCSE 56 (191)
Q Consensus 43 ~~~~~~F~CPfC~e 56 (191)
+. ..|.||.|+.
T Consensus 65 lP--ddW~CPvCga 76 (87)
T 1s24_A 65 IP--DDWCCPDCGA 76 (87)
T ss_dssp CC--TTCCCSSSCC
T ss_pred CC--CCCCCCCCCC
Confidence 55 6789999998
No 346
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=25.63 E-value=6.2 Score=30.90 Aligned_cols=20 Identities=35% Similarity=0.590 Sum_probs=15.1
Q ss_pred ceecCCCCCC-CcCHHHHHhh
Q 029557 47 YEYPCPFCSE-DFDLVGLCCH 66 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H 66 (191)
..|.||||.. .-.+..+...
T Consensus 22 ~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 22 LEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp ECTTCHHHHHHHTTHHHHHHH
T ss_pred ECCCCHhHHHHHHHHHHHHHH
Confidence 5799999998 6666666554
No 347
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=25.58 E-value=21 Score=26.79 Aligned_cols=18 Identities=33% Similarity=0.615 Sum_probs=12.0
Q ss_pred ceecCCCCCC-CcCHHHHH
Q 029557 47 YEYPCPFCSE-DFDLVGLC 64 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~ 64 (191)
..|.||||.. .=.+..|.
T Consensus 30 ~d~~Cp~C~~~~~~l~~l~ 48 (195)
T 2znm_A 30 FGYFCVHCHHFDPLLLKLG 48 (195)
T ss_dssp ECTTSCCTTSSCHHHHHHH
T ss_pred ECCCChhHHHHhHHHHHHH
Confidence 3699999998 43444443
No 348
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=25.55 E-value=18 Score=33.65 Aligned_cols=16 Identities=25% Similarity=0.812 Sum_probs=13.8
Q ss_pred CCCCcccccccccCcc
Q 029557 73 VEAKSGVCPVCVTRVT 88 (191)
Q Consensus 73 ~e~k~vVCPICa~~~~ 88 (191)
.+++.-|||||...||
T Consensus 32 ~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 32 LPPNTAICPVCTGQPG 47 (482)
T ss_dssp CCTTSSCCTTTTTCTT
T ss_pred CCCcCccCceecCCCC
Confidence 4678899999999987
No 349
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=25.11 E-value=19 Score=26.10 Aligned_cols=14 Identities=14% Similarity=0.456 Sum_probs=10.4
Q ss_pred eecCCCCCCCcCHH
Q 029557 48 EYPCPFCSEDFDLV 61 (191)
Q Consensus 48 ~F~CPfC~e~~D~~ 61 (191)
.-.|||||.-|-..
T Consensus 53 ~~~CpYCg~~f~l~ 66 (80)
T 2jvm_A 53 FVECGYCDRRYIHE 66 (80)
T ss_dssp EEECSSSSCEEEEH
T ss_pred eEECCCCCCEEEec
Confidence 57899999955443
No 350
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=25.06 E-value=19 Score=33.57 Aligned_cols=18 Identities=33% Similarity=0.713 Sum_probs=15.1
Q ss_pred CCCCCCcccccccccCcc
Q 029557 71 HPVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 71 H~~e~k~vVCPICa~~~~ 88 (191)
.-.+++.-|||||...||
T Consensus 31 fg~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 31 FGAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp TTCCTTCSCCTTTTTCTT
T ss_pred cCCCCccccCccccCCCC
Confidence 345788899999999988
No 351
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=24.76 E-value=20 Score=26.37 Aligned_cols=12 Identities=42% Similarity=1.041 Sum_probs=9.3
Q ss_pred eecCCCCCCCcC
Q 029557 48 EYPCPFCSEDFD 59 (191)
Q Consensus 48 ~F~CPfC~e~~D 59 (191)
.-.|||||.-|-
T Consensus 48 ~~~CpYCg~~y~ 59 (87)
T 2jz8_A 48 EKICPYCSTLYR 59 (87)
T ss_dssp EECCTTTCCEEE
T ss_pred eEECCCCCCEeE
Confidence 578999998553
No 352
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=24.54 E-value=26 Score=27.07 Aligned_cols=41 Identities=24% Similarity=0.462 Sum_probs=28.4
Q ss_pred cceecCCCCCC--CcCH---HHHHhhhhhcCCCCCC------cccccccccC
Q 029557 46 EYEYPCPFCSE--DFDL---VGLCCHIDEEHPVEAK------SGVCPVCVTR 86 (191)
Q Consensus 46 ~~~F~CPfC~e--~~D~---~~L~~H~~eeH~~e~k------~vVCPICa~~ 86 (191)
|.-|-|--||+ +|+. ..+...+...+-|... .++||-|..+
T Consensus 105 H~HliC~~CG~v~e~~~~~~~~~~~~~~~~~Gf~i~~~~l~~~GiC~~C~~~ 156 (162)
T 4ets_A 105 HDHMICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQ 156 (162)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHHTTCEEEEEEEEEEEECSTTC--
T ss_pred ccEEEECCCCCEEEecccchhHHHHHHHHhCCCEEEEEEEEEEEEChHHcCc
Confidence 35699999999 7764 4556667777776543 2889999764
No 353
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=24.26 E-value=49 Score=24.23 Aligned_cols=39 Identities=15% Similarity=0.376 Sum_probs=27.3
Q ss_pred cceecCCCCCC--CcCH---HHHHhhhhhcCCCCCC------cccccccc
Q 029557 46 EYEYPCPFCSE--DFDL---VGLCCHIDEEHPVEAK------SGVCPVCV 84 (191)
Q Consensus 46 ~~~F~CPfC~e--~~D~---~~L~~H~~eeH~~e~k------~vVCPICa 84 (191)
+.-|.|--||+ +|+. ..+...+...+-+... .++||-|.
T Consensus 81 h~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~G~C~~C~ 130 (131)
T 2o03_A 81 HHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIFGTCSDCR 130 (131)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHHTTCSSCCCCCEEEECCTTTC
T ss_pred CCEEEeCCCCCEEEECCcCHHHHHHHHHHhcCCEEeccEEEEEEEChhhc
Confidence 35789999999 7763 4456666666666443 27899995
No 354
>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA-direct polymerase, primosome, late protein, ATP-binding; HET: DNA; 2.90A {Enterobacteria phage T7} SCOP: e.13.1.2 g.41.3.2
Probab=23.99 E-value=22 Score=28.88 Aligned_cols=11 Identities=36% Similarity=1.072 Sum_probs=9.3
Q ss_pred ceecCCCCCCC
Q 029557 47 YEYPCPFCSED 57 (191)
Q Consensus 47 ~~F~CPfC~e~ 57 (191)
.-++||.||..
T Consensus 13 ~~~~CP~Cg~~ 23 (255)
T 1nui_A 13 YHIPCDNCGSS 23 (255)
T ss_dssp EEECCSSSCCS
T ss_pred cCCcCCCCCCC
Confidence 47999999983
No 355
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.22 E-value=54 Score=22.75 Aligned_cols=32 Identities=19% Similarity=0.546 Sum_probs=18.8
Q ss_pred CCCCcCHHHHHhhhhhcCCCCCCcccccc--cccC
Q 029557 54 CSEDFDLVGLCCHIDEEHPVEAKSGVCPV--CVTR 86 (191)
Q Consensus 54 C~e~~D~~~L~~H~~eeH~~e~k~vVCPI--Ca~~ 86 (191)
||-.|+...+..++...+. ......||+ |...
T Consensus 26 cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 26 CGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred CCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 4445556666666655431 124578999 9754
No 356
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=23.15 E-value=21 Score=33.28 Aligned_cols=17 Identities=12% Similarity=-0.001 Sum_probs=14.6
Q ss_pred CCCCCcccccccccCcc
Q 029557 72 PVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 72 ~~e~k~vVCPICa~~~~ 88 (191)
-.+++.-|||||...||
T Consensus 30 g~~PNt~v~pv~lg~PG 46 (483)
T 3ip4_B 30 GAEPNSNTNVIDLAYPG 46 (483)
T ss_dssp CSSTTCSCCTTTTTCTT
T ss_pred CCCCccCcCchhccCCC
Confidence 35788899999999988
No 357
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=23.15 E-value=38 Score=25.90 Aligned_cols=30 Identities=13% Similarity=0.186 Sum_probs=24.3
Q ss_pred CCCcccccccccCc--ccchHhhhhcccccch
Q 029557 74 EAKSGVCPVCVTRV--TMDMVDHITTQHGNIS 103 (191)
Q Consensus 74 e~k~vVCPICa~~~--~~d~v~Hl~~qH~~~~ 103 (191)
+...++|-.|...- ...++.|+..+|+.=|
T Consensus 12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~ 43 (121)
T 1wir_A 12 GRQHTPCLFCDRLFASAEETFSHCKLEHQFNI 43 (121)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHHSSCCCH
T ss_pred CCCceeEecCCCcccCHHHHHHHHHHhcCCCH
Confidence 45679999998753 3689999999999755
No 358
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=23.12 E-value=18 Score=27.78 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=12.6
Q ss_pred ceecCCCCCCCcCHHH
Q 029557 47 YEYPCPFCSEDFDLVG 62 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~ 62 (191)
..+.|+-||..+....
T Consensus 69 ~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 69 AVFKCRNCNYEWKLKE 84 (139)
T ss_dssp CEEEETTTCCEEEGGG
T ss_pred CcEECCCCCCEEeccc
Confidence 5799999999776643
No 359
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=23.03 E-value=72 Score=23.94 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=18.0
Q ss_pred ceecCC---CCCC-CcCHHHHHhhhhhcCCCCCCcc
Q 029557 47 YEYPCP---FCSE-DFDLVGLCCHIDEEHPVEAKSG 78 (191)
Q Consensus 47 ~~F~CP---fC~e-~~D~~~L~~H~~eeH~~e~k~v 78 (191)
..|-|+ .|-. -+++.+|..|+..-|....+.+
T Consensus 57 ~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~~~ 92 (101)
T 3vk6_A 57 SLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPV 92 (101)
T ss_dssp GCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCCCC
T ss_pred CEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCCCC
Confidence 455555 4555 5566666666666665555543
No 360
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=22.80 E-value=6.5 Score=25.24 Aligned_cols=41 Identities=27% Similarity=0.459 Sum_probs=22.5
Q ss_pred eecCCCCCCCcCHH---HHHhhhhhcCCCC---CCcccccccccCcc
Q 029557 48 EYPCPFCSEDFDLV---GLCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (191)
Q Consensus 48 ~F~CPfC~e~~D~~---~L~~H~~eeH~~e---~k~vVCPICa~~~~ 88 (191)
...||.|.+.+... --|.|.-=..+.. .+...||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 46799998866432 2245542111111 12357999987764
No 361
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=22.64 E-value=21 Score=27.06 Aligned_cols=41 Identities=12% Similarity=0.189 Sum_probs=29.1
Q ss_pred cceecCCCCCC--CcCH---HHHHhhhhhcCCCCCC------cccccccccC
Q 029557 46 EYEYPCPFCSE--DFDL---VGLCCHIDEEHPVEAK------SGVCPVCVTR 86 (191)
Q Consensus 46 ~~~F~CPfC~e--~~D~---~~L~~H~~eeH~~e~k------~vVCPICa~~ 86 (191)
|.-|-|--||+ +|+. ..+...+...+-|... .++||-|..+
T Consensus 97 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 148 (150)
T 2xig_A 97 HDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDMKMFVWCKECQES 148 (150)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHTTTCEEEEEEEEEEEECHHHHCC
T ss_pred ceEEEECCCCCEEEecCCCHHHHHHHHHHHcCCEEeeeEEEEEEEChhhccC
Confidence 36799999999 7763 4566667777777544 2789999653
No 362
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=22.35 E-value=49 Score=29.93 Aligned_cols=24 Identities=25% Similarity=0.553 Sum_probs=20.8
Q ss_pred ceecCCCCCC-CcCHHHHHhhhhhc
Q 029557 47 YEYPCPFCSE-DFDLVGLCCHIDEE 70 (191)
Q Consensus 47 ~~F~CPfC~e-~~D~~~L~~H~~ee 70 (191)
..-.||-||. .||+..+..-+++.
T Consensus 270 ~~ISCPtCGRt~~dl~~~~~~ie~~ 294 (366)
T 3noy_A 270 EIVACPTCGRIEVDLPKVVKEVQEK 294 (366)
T ss_dssp EEEECCCCTTCCSCHHHHHHHHHHH
T ss_pred EEEECCCCCCccccHHHHHHHHHHH
Confidence 4589999999 99999999988753
No 363
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=21.96 E-value=77 Score=21.94 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=15.9
Q ss_pred cCCCCCCCcCHHHHHhhhhhcCCCCCCccccccccc
Q 029557 50 PCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (191)
Q Consensus 50 ~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~ 85 (191)
-||-|+..+... .+...|.||.|..
T Consensus 27 wCP~C~~~~~~~-----------~~~~~v~C~~C~~ 51 (86)
T 2ct7_A 27 WCAQCSFGFIYE-----------REQLEATCPQCHQ 51 (86)
T ss_dssp CCSSSCCCEECC-----------CSCSCEECTTTCC
T ss_pred ECcCCCchheec-----------CCCCceEeCCCCC
Confidence 399888755221 1245589998865
No 364
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=21.52 E-value=31 Score=25.89 Aligned_cols=23 Identities=22% Similarity=0.436 Sum_probs=19.4
Q ss_pred ceecCCCCCCCcCHHHHHhhhhh
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDE 69 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~e 69 (191)
..|.||-|+..+-..-..-|++.
T Consensus 69 ~~~~C~nC~R~vaa~RFApHLeK 91 (99)
T 3mhs_C 69 QYIHCENCGRDVSANRLAAHLQR 91 (99)
T ss_dssp CEEECTTTCCEEEGGGHHHHHHH
T ss_pred CeEECCCCCCCchhhhhHHHHHH
Confidence 68999999998888888888764
No 365
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=21.42 E-value=52 Score=24.83 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=20.3
Q ss_pred ceecCCCCCCCcCHHHHHhhhhhcCCCCCCcccccccccC
Q 029557 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (191)
Q Consensus 47 ~~F~CPfC~e~~D~~~L~~H~~eeH~~e~k~vVCPICa~~ 86 (191)
..|.|--||..|. .--.+++.||.|.+.
T Consensus 66 ~p~~C~~CG~~F~------------~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVFK------------AEINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBCC------------CCSSCCSSCSSSCCC
T ss_pred ECcChhhCcCeec------------ccCCCCCCCcCCCCC
Confidence 4689999999881 122456899999763
No 366
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=21.23 E-value=26 Score=24.50 Aligned_cols=11 Identities=27% Similarity=0.996 Sum_probs=8.7
Q ss_pred eecCCCCCCCc
Q 029557 48 EYPCPFCSEDF 58 (191)
Q Consensus 48 ~F~CPfC~e~~ 58 (191)
...||||+.-|
T Consensus 40 ~~~CpYCg~~f 50 (67)
T 2jrr_A 40 WVECPYCDCKY 50 (67)
T ss_dssp EEEETTTTEEE
T ss_pred eEECCCCCCEE
Confidence 57899999844
No 367
>3kfu_F Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=20.37 E-value=26 Score=32.62 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=14.8
Q ss_pred CCCCCcccccccccCcc
Q 029557 72 PVEAKSGVCPVCVTRVT 88 (191)
Q Consensus 72 ~~e~k~vVCPICa~~~~ 88 (191)
-.+++.-|||||...||
T Consensus 30 g~~PNt~vcpvclglPG 46 (466)
T 3kfu_F 30 GAEPNTHTCPVCLGLPG 46 (466)
T ss_dssp SCCTTSSCCTTTTTCTT
T ss_pred CCCCCCccCccccCCCC
Confidence 55788899999999988
Done!