BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029560
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 358 bits (919), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/189 (90%), Positives = 180/189 (95%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD TSV+HLFPITKYLGLLATGMTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KW
Sbjct: 58 DKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKW 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IADKSQVYTQHAYMRPLGVVAM+L IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAIN
Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAIN 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKKMKNDPAF+++ETVQTAIS LQSVLQEDFKASEIEVGVV KE+P FRVL+ EEIDE
Sbjct: 178 FLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDE 237
Query: 183 HLTAISERD 191
HLTAISERD
Sbjct: 238 HLTAISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 358 bits (919), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/189 (89%), Positives = 182/189 (96%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD+TSVTHLFPITKYLGLLATGMTADARTLVQQAR EAAEFRF YGYEMPVDVLAKW
Sbjct: 58 DKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKW 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IADKSQVYTQHAYMRPLGVVAMVL ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAIN
Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAIN 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKKMKNDP+FT++ETVQTAIS LQSVLQEDFKA+EIEVGVV K+NPEFRVL+ +EIDE
Sbjct: 178 FLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDE 237
Query: 183 HLTAISERD 191
HLTAISERD
Sbjct: 238 HLTAISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 342 bits (877), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 176/189 (93%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD +SVTHLFPITKY+GL+ATG+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKW
Sbjct: 58 DKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKW 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IADKSQVYTQHAYMRPLGVVAMV+ +DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+N
Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVN 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKKMK +P+FTF ETVQTAIS LQSVLQEDFKA+EIEVGVV ENPEFR L+ EEI+E
Sbjct: 178 FLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEE 237
Query: 183 HLTAISERD 191
HLTAISERD
Sbjct: 238 HLTAISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 338 bits (866), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 174/189 (92%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD +SV+HLFP+TKYLGLLATGMTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKW
Sbjct: 58 DKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKW 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IADKSQVYTQHAYMRPLGVVAMVL IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+N
Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVN 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKKMK +PAFT+ ETVQTAIS LQSVLQEDFKA+EIEVGVV ++P FR L EEIDE
Sbjct: 178 FLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDE 237
Query: 183 HLTAISERD 191
HLTAISERD
Sbjct: 238 HLTAISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/189 (84%), Positives = 174/189 (92%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLDHTSVTHLFPITKY+GLLATG+TADAR+LV QAR EAAEFRFK+GYEMPVDVLAKW
Sbjct: 58 DKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKW 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IADK+QVYTQHAYMRPLGVVAMVL DEE +LFKCDPAGHFFGHKATSAGLKEQEAIN
Sbjct: 118 IADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAIN 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKKMK+DP F+++ETVQ AIS LQSVLQEDFKA+EIEVGVV K++ FR L+ EEID+
Sbjct: 178 FLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQ 237
Query: 183 HLTAISERD 191
HLTAISERD
Sbjct: 238 HLTAISERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 155/189 (82%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K
Sbjct: 58 DKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKR 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +
Sbjct: 118 IADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTS 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID
Sbjct: 178 FLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDA 237
Query: 183 HLTAISERD 191
HL A++ERD
Sbjct: 238 HLVALAERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 155/189 (82%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K
Sbjct: 58 DKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKR 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +
Sbjct: 118 IADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTS 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID
Sbjct: 178 FLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDA 237
Query: 183 HLTAISERD 191
HL A++ERD
Sbjct: 238 HLVALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 155/189 (82%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K
Sbjct: 58 DKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKR 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +
Sbjct: 118 IADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTS 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID
Sbjct: 178 FLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDA 237
Query: 183 HLTAISERD 191
HL A++ERD
Sbjct: 238 HLVALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 155/189 (82%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K
Sbjct: 58 DKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKR 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
IAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +
Sbjct: 118 IADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTS 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID
Sbjct: 178 FLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDA 237
Query: 183 HLTAISERD 191
HL A++ERD
Sbjct: 238 HLVALAERD 246
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 210 bits (534), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
Query: 10 SVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQV 69
+VTHLF ITK +G TG AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD +QV
Sbjct: 65 TVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQV 124
Query: 70 YTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 129
YTQ+A MRPLG ++++ D E GP ++K DPAG+F G KA S G K EA ++LEKK K
Sbjct: 125 YTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK 184
Query: 130 NDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 189
P + ++ +Q AIS L SVL DFK + IE+GVVSK +P FR+L EI+EHLT I+E
Sbjct: 185 --PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAE 242
Query: 190 RD 191
+D
Sbjct: 243 KD 244
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 210 bits (534), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 139/191 (72%), Gaps = 4/191 (2%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKL+D ++V H+FPITK +G + TG ADAR V +AR EAAEF +K GY MP DVLAK
Sbjct: 56 DKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKR 115
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
+A+ +QV TQ A MRPLGV ++++D+E GP LFK DPAG + G+KATSAG K+ E IN
Sbjct: 116 MANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETIN 175
Query: 123 FLEKKMKND--PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 180
+LEK+ K D P+ +TV+T I L S L DFK++E+++GVV + P FRVLS+EEI
Sbjct: 176 WLEKRFKKDGIPS-NLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEI 233
Query: 181 DEHLTAISERD 191
+ HL +I+E+D
Sbjct: 234 EAHLQSIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 200 bits (508), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKL+D SVT L+ +T Y+G + TG+ D+++ +A E A F K+GY++P +VLAK
Sbjct: 57 DKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKR 116
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
+AD +Q+ TQHA RPLGV +++ ID+E GP+LFK DPAG F G+KAT+AG KEQE+ N
Sbjct: 117 MADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTN 176
Query: 123 FLEKKMKNDPAFTFQETVQT-----AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSI 177
FLEKK K++P + ET+Q AISTLQSVL D K+S++E+G+ + +N +F +++
Sbjct: 177 FLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTD 236
Query: 178 EEIDEHLTAISERD 191
E+ID LT ++ERD
Sbjct: 237 EDIDSQLTKLAERD 250
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 169 bits (429), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 135/194 (69%), Gaps = 7/194 (3%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKLLD T+V+++F I++ +G++ G DAR +A+ EAAEFR+KYGY+MP DVLAK
Sbjct: 61 DKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKR 120
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
+A+ SQ+YTQ AYMRPLGV+ +S+DEE GP ++K DPAG++ G+KAT+ G K+QE
Sbjct: 121 MANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITT 180
Query: 123 FLE---KKMKNDPAF--TFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSI 177
LE KK K D ++++ V+ AI+ + L +F +++EVGV +K+ +F LS
Sbjct: 181 NLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKD--KFFTLSA 238
Query: 178 EEIDEHLTAISERD 191
E I+E L AI+E+D
Sbjct: 239 ENIEERLVAIAEQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 159 bits (403), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 125/189 (66%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
D L+ +VT ++ I++ +G A GM DA+ +++A+ EAA +++K GY+MP ++LAK
Sbjct: 58 DSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKK 117
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
+AD +Q YTQ+A MR LG + +S D+E GP +++ DPAG++ G K S G+K+ A +
Sbjct: 118 MADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATS 177
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
FLEKK+K T E ++ AI LQ+ L D ++ ++EV VV+K+N +F L+ ++++
Sbjct: 178 FLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEH 237
Query: 183 HLTAISERD 191
HL I+ RD
Sbjct: 238 HLNQIANRD 246
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL++ S+ ++ I ++G G+ ADAR LV++AR EA +R+ YG + VDVL K I
Sbjct: 59 KLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D QVYTQH +RP G ++ +D + G RLF+ DP+G HKAT+ G QEA++
Sbjct: 119 CDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDV 177
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
E++ + D T QE ++ A+ L +E+ A +E+ VV K+ FR L ++I+E
Sbjct: 178 FEEEYRED--MTLQEAIELAVRALYEASREETTADNLEIAVVDKQG--FRKLERKKIEE 232
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 3 DKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 62
DKL+ ++T L+ + G+ TG D + LVQ+AR EA+E++++YG M V VLAK
Sbjct: 55 DKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKP 114
Query: 63 IADKSQVYTQHAYMRPLGVVAMVLSI--DEECG---PRLFKCDPAGHFFGHKATSAGLKE 117
D +QV TQ A MR +G + + + ++E G P+++ DPAG H A + G K+
Sbjct: 115 WQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQ 173
Query: 118 QEAINFLEKKMKNDPAFTF--QETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVL 175
EA FLEKK KN P T +E A++ LQS L E +AS +EVG + ++ F +
Sbjct: 174 IEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRV 233
Query: 176 SIEEIDEHLTAISE 189
S E+ + LT +++
Sbjct: 234 SDREVKKWLTPLAK 247
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL+ S+ +F I ++ +G+ ADAR L+ +AR EA +R YG E+ +++LAK I
Sbjct: 58 KLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKI 117
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQH +RP GV ++ ID+ RLF+ DP+G +KAT+ G +
Sbjct: 118 CDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMEL 176
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEE 179
LEK+ ++D T E ++ AI+ L ED K ++V +++ ++ +F+ + +EE
Sbjct: 177 LEKEYRDD--ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+L++ S+ +F I +++G +G+ ADAR+LV +AR EA R Y + V+V++K I
Sbjct: 56 RLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKI 115
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G +
Sbjct: 116 CDHKQTYTQYGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEV 174
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
E + D + + L + F A +EVGVVS E+ +FR L EE++ +
Sbjct: 175 FEADYRED--MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENY 232
Query: 184 LTAISER 190
+ I E+
Sbjct: 233 VQQILEK 239
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I
Sbjct: 58 RLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKI 117
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G +
Sbjct: 118 CDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEV 176
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
E + + D + + L + F AS +EVG+VS ++ +FR L EE++ +
Sbjct: 177 FEAEYRQD--MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENY 234
Query: 184 LTAISER 190
+ I E+
Sbjct: 235 VQQILEK 241
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I
Sbjct: 58 RLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKI 117
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G +
Sbjct: 118 CDHKQTYTQYGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEV 176
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
E + D + + L + F A +EVGVVS E+ +FR L EE++ +
Sbjct: 177 FEADYRED--MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENY 234
Query: 184 LTAISER 190
+ I E+
Sbjct: 235 VHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+L++ S+ +F I ++G +G+ ADAR LV +AR EA R Y + V+V++K I
Sbjct: 56 RLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKI 115
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQ+ +RP G ++ +D++ PRLF+ DP+G +KAT+ G +
Sbjct: 116 CDHKQTYTQYGGVRPYGTALLIAGVDDKR-PRLFETDPSGALLEYKATAIGAGRNAVVEV 174
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
E K D + + + L + F A +EVGVVS ++ +FR L EE+ +
Sbjct: 175 FEADYKED--MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNY 232
Query: 184 LTAISER 190
+ I E+
Sbjct: 233 VQQILEK 239
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Query: 1 MQDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLA 60
+ +L++ S +F I ++ ++G+ ADAR LV +AR EA R YG P+ V+
Sbjct: 56 ITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIV 115
Query: 61 KWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEA 120
K I D Q++TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A
Sbjct: 116 KKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTA 173
Query: 121 INFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 180
+ E+K K+D + +E ++ AI L +++ A IEV +++ ++ +FR LS EEI
Sbjct: 174 MAIFEEKYKDD--MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEI 230
Query: 181 DEHLT 185
+++L
Sbjct: 231 EKYLN 235
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Query: 1 MQDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLA 60
+ +L++ S +F I ++ ++G+ ADAR LV +AR EA +R YG PV V+
Sbjct: 56 ITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIV 115
Query: 61 KWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEA 120
K I D Q++TQ+ +RP G ++ I++ P L++ DP+G +F KA + G A
Sbjct: 116 KKICDLKQMHTQYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTA 173
Query: 121 INFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 180
+ E+K ++D ++ ++ A+ L + E+ A IEV V++ ++ +FR L+ +EI
Sbjct: 174 MAIFEEKYRDD--MNLEDAIKLALMALAKTM-ENPSADNIEVAVITVKDKKFRKLTRDEI 230
Query: 181 DEHLT 185
+++L+
Sbjct: 231 EKYLS 235
>sp|O73672|PSA2_CARAU Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2
SV=3
Length = 234
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 5/184 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L D SV + PITK++G++ +GM D R LV++AR A ++ Y +P L + +A
Sbjct: 56 LYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q YTQ +RP GV ++ DE+ P LF+ DP+G +F KAT+ G FL
Sbjct: 116 SVMQEYTQSGGVRPFGVSLLIAGWDEDR-PYLFQSDPSGAYFAWKATAMGKSYVNGKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D ++ + TAI TL+ + IEVG+ ++ FR LS E+ ++L
Sbjct: 175 EKRYNED--LELEDAIHTAILTLKESFEGQMTEENIEVGICNEAG--FRRLSPAEVKDYL 230
Query: 185 TAIS 188
AI+
Sbjct: 231 AAIA 234
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 105/181 (58%), Gaps = 5/181 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL++ S +F I ++ ++G+ ADAR LV +AR EA +R YG +P+ VL K I
Sbjct: 59 KLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q++TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+
Sbjct: 119 CDLKQMHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAI 176
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
E+K +++ T +E ++ A+ L +++E S IEV V+S + +F+ ++ EE+ +
Sbjct: 177 FEEKYRDE--MTLEEAIKLAVLALSKIMEEPSPES-IEVAVISVKEKKFKKITPEEVAKC 233
Query: 184 L 184
L
Sbjct: 234 L 234
>sp|Q54DM7|PSA2_DICDI Proteasome subunit alpha type-2 OS=Dictyostelium discoideum
GN=psmA2 PE=3 SV=1
Length = 232
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 106/180 (58%), Gaps = 4/180 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L+D TSV + IT+ +GL+ GM D+R L+++AR E+ ++ +Y ++PV L + +A
Sbjct: 54 LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELA 113
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q +TQ +RP GV +V DE+ GP L++ DP+G +F KAT+ G + FL
Sbjct: 114 SIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFL 172
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ +D ++ +QTA+ T++ + +E+ ++ K N EF++L+ +I ++L
Sbjct: 173 EKRYSDD--LEIEDAIQTALITIKEGFETQLTEFNMELAIIGK-NQEFKILTPAQIKDYL 229
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 1 MQDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLA 60
+ +L++ S +F I ++ ++G+ ADAR LV +AR EA R YG P+ V+
Sbjct: 56 ITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIV 115
Query: 61 KWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEA 120
K I D Q++TQ+ +RP G ++ ++++ P L++ DP+G +F KA + G A
Sbjct: 116 KKICDLKQMHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTA 173
Query: 121 INFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 180
+ E K ++D T E ++ AI L +++ A IEV V++ ++ +FR LS EEI
Sbjct: 174 MAIFEDKYRDD--MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEEI 230
Query: 181 DEHL 184
++ L
Sbjct: 231 EKFL 234
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 1 MQDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLA 60
++ KL++ S+ + I Y+ + +G+ ADAR L+ AR A + + YG + ++ L
Sbjct: 54 IRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLV 113
Query: 61 KWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEA 120
K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G +
Sbjct: 114 KRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAV 172
Query: 121 INFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEI-EVGVVSKENPEFRVLSI 177
++FLEK+ K + +E V I L++ L+ E+ KA EI + V SK +R+
Sbjct: 173 VSFLEKEYKE--GLSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSK----YRIYGA 226
Query: 178 EEIDEHL 184
EE+ + L
Sbjct: 227 EEVKKFL 233
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I
Sbjct: 59 KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+
Sbjct: 119 CDIKQAYTQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEV 177
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
LE K D T E ++ A+ L S E+ K I++ +V +S++EI++
Sbjct: 178 LESKYSED--MTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKI 234
Query: 184 LTAI 187
+ A+
Sbjct: 235 VKAV 238
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L+D TSV + +T +G++ +GM D R LV+++R +A ++ Y +PV L + A
Sbjct: 56 LVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q +TQ +RP GV ++ D+ GP+L++ DP+G +F KA++ G A FL
Sbjct: 116 AVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D + + TAI TL+ + A+ IE+G++ + + EF+VLS EI + L
Sbjct: 175 EKRYTED--MELDDAIHTAILTLKEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFL 231
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L+D TSV + +T +G++ +GM D R LV+++R +A ++ Y +PV L + A
Sbjct: 56 LVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q +TQ +RP GV ++ D+ GP+L++ DP+G +F KA++ G A FL
Sbjct: 116 AVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D + + TAI TL+ + A+ IE+G++ + + EF+VLS EI + L
Sbjct: 175 EKRYTED--MELDDAIHTAILTLKEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFL 231
>sp|P25787|PSA2_HUMAN Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2
Length = 234
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L D SV + PITK++GL+ +GM D R LV +AR A ++ Y +P L + +A
Sbjct: 56 LYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q YTQ +RP GV ++ + E P LF+ DP+G +F KAT+ G FL
Sbjct: 116 SVMQEYTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D ++ + TAI TL+ + IEVG+ ++ FR L+ E+ ++L
Sbjct: 175 EKRYNED--LELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVKDYL 230
Query: 185 TAIS 188
AI+
Sbjct: 231 AAIA 234
>sp|Q3T0Y5|PSA2_BOVIN Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3
Length = 234
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L D SV + PITK++GL+ +GM D R LV +AR A ++ Y +P L + +A
Sbjct: 56 LYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q YTQ +RP GV ++ + E P LF+ DP+G +F KAT+ G FL
Sbjct: 116 SVMQEYTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D ++ + TAI TL+ + IEVG+ ++ FR L+ E+ ++L
Sbjct: 175 EKRYNED--LELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVKDYL 230
Query: 185 TAIS 188
AI+
Sbjct: 231 AAIA 234
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Query: 1 MQDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLA 60
+ KLL+ +S+ +F I ++G+ ++G+ DAR+LV +AR E+ R Y ++ V++L+
Sbjct: 55 VNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLS 114
Query: 61 KWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEA 120
K + D Q YTQ RP G ++ I + RLF+ DP+G +KAT G+
Sbjct: 115 KKLCDHMQTYTQFGGARPYGTALLIAGI-SDGQFRLFETDPSGTLLEYKATGIGIGRNAV 173
Query: 121 INFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 180
+ E++ +P + ++ + + L + + F + +E+GVV+ + P FR +S +E+
Sbjct: 174 MKVFEEEY--NPEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEV 231
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I
Sbjct: 59 KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+
Sbjct: 119 CDIKQAYTQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEV 177
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
LE K D T E ++ A+ L S E+ K I++ +V +S++EI++
Sbjct: 178 LESKY--DENMTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKI 234
Query: 184 LTAI 187
+ A+
Sbjct: 235 VKAV 238
>sp|P17220|PSA2_RAT Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1
SV=3
Length = 234
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L D SV + PITK++GL+ +GM D R LV +AR A ++ Y +P L + +A
Sbjct: 56 LYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q YTQ +RP GV ++ + E P LF+ DP+G +F KAT+ G FL
Sbjct: 116 SVMQEYTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D ++ + TAI TL+ + IEVG+ ++ FR L+ E+ ++L
Sbjct: 175 EKRYNED--LELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVRDYL 230
Query: 185 TAIS 188
AI+
Sbjct: 231 AAIA 234
>sp|P49722|PSA2_MOUSE Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=3
Length = 234
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L D SV + PITK++GL+ +GM D R LV +AR A ++ Y +P L + +A
Sbjct: 56 LYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q YTQ +RP GV ++ + E P LF+ DP+G +F KAT+ G FL
Sbjct: 116 SVMQEYTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D ++ + TAI TL+ + IEVG+ ++ FR L+ E+ ++L
Sbjct: 175 EKRYNED--LELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVRDYL 230
Query: 185 TAIS 188
AI+
Sbjct: 231 AAIA 234
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 8/186 (4%)
Query: 1 MQDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLA 60
++ +L++ S+ + I Y+ + +G+ ADAR LV AR A + + YG + ++ L
Sbjct: 54 VRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLV 113
Query: 61 KWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEA 120
K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G +
Sbjct: 114 KRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAV 172
Query: 121 INFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIE 178
++FLE++ K + +E V I L+S L+ E+ KA EI V ++R+ E
Sbjct: 173 VSFLEREYKEN--LPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGN---KYRIYDQE 227
Query: 179 EIDEHL 184
E+ + L
Sbjct: 228 EVKKFL 233
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I
Sbjct: 59 KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+
Sbjct: 119 CDIKQAYTQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEV 177
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
LE K D T E ++ A+ L S E+ K I++ ++ +S++EI++
Sbjct: 178 LESKY--DENMTVSEGMELALYAL-SKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKI 234
Query: 184 LTAI 187
+ A+
Sbjct: 235 VKAV 238
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L+ +S+ + I ++G +G+TADARTL+ AR EA RF Y + V+V+A+ I+
Sbjct: 58 LMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAIS 117
Query: 65 DKSQVYTQHA-----YMRPLGVVAMVLSIDEECGPRLFKCDPAGHF--FGHKATSAGLKE 117
D S + + + RP GV ++ +D E GPRLF+ DP+G F F KAT AG +
Sbjct: 118 DLSLRFGEGSRKKKVMSRPFGVALLIAGVD-ETGPRLFQTDPSGMFIEFYAKATGAGTEA 176
Query: 118 QEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSI 177
++I L +K + + T +E A+STL+ V++E + +EV +V+ E +F ++
Sbjct: 177 AQSI--LHEKY--NKSMTLREAEILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDT 232
Query: 178 EEIDEHLTAISE 189
I+ + I E
Sbjct: 233 AFIENLIGEIKE 244
>sp|P24495|PSA2_XENLA Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2
SV=2
Length = 234
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L D S + PITK++G++ +GM D R LV++AR A ++ Y +P L + +A
Sbjct: 56 LYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q YTQ +RP GV ++ D E P LF+ DP+G +F KAT+ G FL
Sbjct: 116 SVMQEYTQSGGVRPFGVSLLIAGWD-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D ++ + TAI TL+ + IEVG+ ++ F+ L+ E+ ++L
Sbjct: 175 EKRYNED--LELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FKRLTPAEVKDYL 230
Query: 185 TAIS 188
AI+
Sbjct: 231 AAIA 234
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL++ S+ +F I +++G +G+ ADAR ++++AR EA R Y + V+ LAK I
Sbjct: 58 KLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKI 117
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q+YTQH +RP G ++ ++ G RLF+ DP+G +KAT+ G A+
Sbjct: 118 CDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEE 176
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
EKK +D + ++ A+ + + +E+ V+ + ++R L +EI +H
Sbjct: 177 FEKKYSDD--MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDH 234
Query: 184 L 184
+
Sbjct: 235 V 235
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+LL+ S+ +F I ++G+ ++G+ DAR+LV +AR E+ R Y + V++LAK +
Sbjct: 58 RLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKL 117
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSI-DEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN 122
D Q YTQ RP G ++ + D E RLF+ DP+G +KAT G I
Sbjct: 118 CDHMQTYTQFGGARPYGTALLIAGVSDGEA--RLFETDPSGTLLEYKATGIGTGRPAVIK 175
Query: 123 FLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 182
E + + D F+ ++ I L + + S IE+GVVS E EFR + +E+
Sbjct: 176 TFEDEYQEDADFS--GAIRLGIKALHAATEGKLDVSAIEIGVVSIETGEFRKMEKDEVKA 233
Query: 183 HLTAISE 189
++ E
Sbjct: 234 YVDQFEE 240
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I
Sbjct: 59 KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+
Sbjct: 119 CDIKQAYTQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEV 177
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
LE K D E ++ A+ L S E+ K I++ +V +S++EI++
Sbjct: 178 LESKY--DENMIVSEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKI 234
Query: 184 LTAI 187
+ A+
Sbjct: 235 VKAV 238
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+LLD S+ +F + ++G G+ +D R L+ AR + + R Y + +D L K I
Sbjct: 59 QLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLI 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
+D Q+YTQH +RP GV +V +D +LF +P+G F ++A + G A ++
Sbjct: 119 SDVKQMYTQHGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDY 177
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEID 181
LEK K D + +ET+ A++ L+ L+ E +E+G +KE +FR +++EE
Sbjct: 178 LEKNYKED--LSVEETILLALNALKVTLKPGEKLGPGNVEIGFATKEG-QFRKMTLEERA 234
Query: 182 EHLTAI 187
+L I
Sbjct: 235 NYLQKI 240
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
+LLD S+ +F + ++G G+ +D R L+ AR +A + R Y + +D L K +
Sbjct: 59 QLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLV 118
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
+D Q+YTQH +RP GV ++ ID P+L +P+G F + A + G A +
Sbjct: 119 SDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEY 178
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 179
EK + D Q+T+ I L S L+ E S IEVG ++ FR +S EE
Sbjct: 179 FEKNYRED--LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L+D SV + +T +G++ +GM D R LV+++R +A ++ Y +PV L + A
Sbjct: 56 LVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q +TQ +RP GV +V D++ GP+L++ DP+G +F KA++ G A FL
Sbjct: 116 TVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D + + TAI TL+ + + + IE+G + + FRVL+ EID++L
Sbjct: 175 EKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADK-VFRVLTPAEIDDYL 231
Query: 185 TAI 187
+
Sbjct: 232 AEV 234
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 4 KLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 63
KLL+ ++ ++ I +++ +G+ ADAR L+ +AR EA R Y + V LAK I
Sbjct: 57 KLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKI 116
Query: 64 ADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINF 123
D Q YTQ+ +RP GV ++ +DE P+L++ DP+G +KAT+ G+ F
Sbjct: 117 CDFKQQYTQYGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEF 174
Query: 124 LEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEH 183
EK+ ++D +F + + + + ++ + IEVG V ++ F+ +S EE+ +
Sbjct: 175 FEKEYRDD--LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPY 232
Query: 184 LTAISER 190
+ +ER
Sbjct: 233 VERANER 239
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 5 LLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 64
L+D SV + +T +G + +GM D R LV+++R +A ++ Y +PV L + A
Sbjct: 56 LVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETA 115
Query: 65 DKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFL 124
Q +TQ +RP GV +V D++ GP+L++ DP+G +F KA++ G A FL
Sbjct: 116 TVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 174
Query: 125 EKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 184
EK+ D + + TAI TL+ + + + IE+G + + FRVL+ EID++L
Sbjct: 175 EKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDK-VFRVLTPAEIDDYL 231
Query: 185 TAI 187
+
Sbjct: 232 AEV 234
>sp|Q27488|PSA2_CAEEL Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2
PE=1 SV=1
Length = 231
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 5/172 (2%)
Query: 17 ITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYM 76
I+K++G + +GM D R LV++AR A E+ YG EMP L IA Q YTQ +
Sbjct: 64 ISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGV 123
Query: 77 RPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFT 135
RP G ++ D+ G P LF+CDP+G +F KAT+ G + A FLEK+ A
Sbjct: 124 RPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSE--ALE 181
Query: 136 FQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 187
+ + TA+ TL+ + +EV V + F L+ +++ +HL +
Sbjct: 182 LDDGIHTALLTLRESFDVGMNENNVEVAVCNSTG--FHRLTKQQVHDHLGTL 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,824,647
Number of Sequences: 539616
Number of extensions: 2424343
Number of successful extensions: 7271
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 6914
Number of HSP's gapped (non-prelim): 245
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)