BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029565
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33491|ABP2_TOBAC Auxin-binding protein T92 OS=Nicotiana tabacum GN=T92 PE=3 SV=1
Length = 187
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/192 (72%), Positives = 157/192 (81%), Gaps = 6/192 (3%)
Query: 1 MARSWLIFLCLSFILLSANIEADASHCSIKGFPLVRNISELPQDNYGREGLAHITVAGSI 60
MAR +I + + + A+ASHCSI G PLVRNISELPQ+NYGR GL+H T+AGS+
Sbjct: 1 MARHIIILVAVFWFAT-----AEASHCSINGLPLVRNISELPQENYGRSGLSHTTIAGSV 55
Query: 61 LHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFF 120
LHGMKEIEVWLQTF+PG RTPIHRHSCEEIFIVLKG GTLYL SSH K+PG PQE F
Sbjct: 56 LHGMKEIEVWLQTFAPGFRTPIHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIF 115
Query: 121 ANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWDE 180
NSTFHIPVND HQVWNT E EDLQ+L VISRPPVKVF+Y+DWSMPHTAAKLKFPY+WDE
Sbjct: 116 PNSTFHIPVNDVHQVWNTGEQEDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDE 175
Query: 181 QCLQSPV-KDEL 191
+C Q+ KDEL
Sbjct: 176 ECYQTTSRKDEL 187
>sp|P33490|ABP1_TOBAC Auxin-binding protein T85 OS=Nicotiana tabacum GN=T85 PE=3 SV=1
Length = 187
Score = 290 bits (742), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 134/171 (78%), Positives = 150/171 (87%), Gaps = 1/171 (0%)
Query: 22 ADASHCSIKGFPLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTP 81
A+AS CSI G PLVRNISELPQ+NYGR GL+H T+AGS+LHGMKEIEVWLQTF+PG+RTP
Sbjct: 17 AEASQCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGSRTP 76
Query: 82 IHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNEN 141
IHRHSCEEIF+VLKG G LYL SSH K+PG PQE F NSTFHIPVND HQVWNT E+
Sbjct: 77 IHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTGEH 136
Query: 142 EDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWDEQCLQSPV-KDEL 191
EDLQ+LVVISRPPVKVF+Y+DWSMPHTAAKLKFPY+WDE+C Q+ KDEL
Sbjct: 137 EDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 187
>sp|P33487|ABP1_ARATH Auxin-binding protein 1 OS=Arabidopsis thaliana GN=ERABP1 PE=1 SV=1
Length = 198
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 152/186 (81%), Gaps = 2/186 (1%)
Query: 6 LIFLCLSFILLSANIEADASHCSIKGFPLVRNISELPQDNYGREGLAHITVAGSILHGMK 65
++ ++ +L + + + C I G P+VRNIS+LPQDNYGR GL+H+TVAGS+LHGMK
Sbjct: 15 VVVFSVALLLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMK 74
Query: 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125
E+E+WLQTF+PG+ TPIHRHSCEE+F+VLKGSGTLYLA +H PGKP E FANST
Sbjct: 75 EVEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTI 133
Query: 126 HIPVNDAHQVWNTNENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWDEQCLQS 185
HIP+NDAHQV NT +EDLQ+LV+ISRPP+K+FIYEDW MPHTAA+LKFPY+WDEQC+Q
Sbjct: 134 HIPINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQE 192
Query: 186 PVKDEL 191
KDEL
Sbjct: 193 SQKDEL 198
>sp|P33488|ABP4_MAIZE Auxin-binding protein 4 OS=Zea mays GN=ABP4 PE=2 SV=1
Length = 204
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/158 (74%), Positives = 135/158 (85%), Gaps = 2/158 (1%)
Query: 34 LVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIV 93
LVR+IS + Q NYGREG +HITV G++ HG KE+EVWLQTF PG RTPIHRHSCEE+FIV
Sbjct: 49 LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108
Query: 94 LKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153
LKG GTL L SSS K+PG+PQE F N+TF IPVND HQVWN+NE+EDLQ+LV+ISRP
Sbjct: 109 LKGKGTLLLGSSSL-KYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 167
Query: 154 PVKVFIYEDWSMPHTAAKLKFPYFWDEQCLQSPVKDEL 191
PVK+FIY+DWSMPHTAAKLKFPYFWDE CL +P KDEL
Sbjct: 168 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP-KDEL 204
>sp|P13689|ABP1_MAIZE Auxin-binding protein 1 OS=Zea mays GN=ABP1 PE=1 SV=1
Length = 201
Score = 246 bits (628), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 14 ILLSANIEADASHCSIKGFPLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQT 73
+LL+A+ A ++ LVR+IS++PQ +YG EGL+HITVAG++ HGMKE+EVWLQT
Sbjct: 26 VLLAASFLPVAESSCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQT 85
Query: 74 FSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAH 133
SPG RTPIHRHSCEE+F VLKG GTL + SSS K+PG+PQE FF N+TF IPVND H
Sbjct: 86 ISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSL-KYPGQPQEIPFFQNTTFSIPVNDPH 144
Query: 134 QVWNTNENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWDEQCLQSPVKDEL 191
QVWN++E+EDLQ+LV+ISRPP K+F+Y+DWSMPHTAA LKFP+ WDE C ++ KDEL
Sbjct: 145 QVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA-AKDEL 201
>sp|P33489|ABP5_MAIZE Auxin-binding protein 5 (Fragment) OS=Zea mays GN=ABP5 PE=3 SV=1
Length = 150
Score = 156 bits (395), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
Query: 34 LVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIV 93
LVR+IS + Q NYGREG +HITV G++ HG KE+EVWLQTF PG RTPIHRHSCEE+FIV
Sbjct: 49 LVRDISRMQQSNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108
Query: 94 LKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136
LKG GTL L SSS K+PG+PQE F N+TF IPVND HQVW
Sbjct: 109 LKGKGTLLLGSSSL-KYPGQPQEVPVFQNTTFSIPVNDPHQVW 150
>sp|Q59013|Y1618_METJA Uncharacterized protein MJ1618 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1618 PE=4 SV=1
Length = 125
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 77 GTRTPIHRH-SCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQV 135
G++T +H+H + EEI+ +L+G G + L + E G T +IP H++
Sbjct: 49 GSKTLLHKHYTSEEIYYILEGRGLMTLDNEKFEVKKG----------DTIYIPPKTPHKI 98
Query: 136 WNTNENEDLQMLVVISRPP 154
N N L++L S PP
Sbjct: 99 ENIG-NVPLKILCC-SYPP 115
>sp|Q6AQ32|GSA_DESPS Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=hemL PE=3
SV=1
Length = 430
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 85 HSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144
H + F+V GSG L L PG P++ +T IP N + T + DL
Sbjct: 145 HGHADSFLVKAGSGVLTLGIPGS---PGVPED---IVKNTISIPYNSVEALETTLRDADL 198
Query: 145 QMLVVISRP 153
+ VI P
Sbjct: 199 NIACVIVEP 207
>sp|P26759|GER3_WHEAT Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1
Length = 224
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 74 FSPGTRTPIHRH-SCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDA 132
F+PG P H H EI IV+KG + + S + K A TF IP
Sbjct: 102 FAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGN--KLYSRVVRAGETFLIPRGLM 159
Query: 133 HQVWNTNENEDLQMLVVISRPPVKVFI 159
H +N + E ++ S+ P VF+
Sbjct: 160 HFQFNVGKTEASMVVFFNSQSPSVVFV 186
>sp|Q65Q31|RHAS_MANSM HTH-type transcriptional activator RhaS OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=rhaS PE=3 SV=1
Length = 268
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPG-----KPQEHFF 119
KE + L+ +P P H H +E+ IV GSG L H+ +PG + Q+H
Sbjct: 14 KEQPIILEPRAPQEIFPEHTHDFDELVIVKHGSGRHILNGYPHDLYPGVVLYIQAQDHHS 73
Query: 120 FAN 122
+ N
Sbjct: 74 YEN 76
>sp|Q69GY7|UCRIA_SOLTU Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Solanum tuberosum GN=petC PE=2 SV=1
Length = 230
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTL 100
WL+T SPGTRT + ++V++ GTL
Sbjct: 120 WLKTHSPGTRTLTQGLKGDPTYLVVENDGTL 150
>sp|P55608|Y4OW_RHISN Uncharacterized protein y4oW OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02130 PE=4 SV=1
Length = 216
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 83 HRHSCEEIFIVLKGSGTLYLASSSHEKHPG 112
H H C+E +++++G+GT+ + S S E G
Sbjct: 134 HYHDCDEYWVIIEGAGTVVVGSRSFEVEVG 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,847,590
Number of Sequences: 539616
Number of extensions: 3174225
Number of successful extensions: 5347
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5333
Number of HSP's gapped (non-prelim): 13
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)