Query 029565
Match_columns 191
No_of_seqs 202 out of 1715
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 00:46:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lr5_A Auxin binding protein 1 99.9 2.3E-26 7.9E-31 178.7 15.4 159 30-191 4-163 (163)
2 3l2h_A Putative sugar phosphat 99.7 2.2E-16 7.7E-21 121.8 12.5 113 61-185 40-155 (162)
3 3ht1_A REMF protein; cupin fol 99.7 6E-16 2E-20 116.3 12.0 109 33-153 3-116 (145)
4 3kgz_A Cupin 2 conserved barre 99.7 1.5E-15 5.2E-20 117.7 14.5 105 37-155 11-121 (156)
5 3jzv_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 116.9 14.5 114 27-154 10-129 (166)
6 3i7d_A Sugar phosphate isomera 99.6 5.9E-15 2E-19 114.8 13.9 90 62-162 38-131 (163)
7 1v70_A Probable antibiotics sy 99.6 5.9E-15 2E-19 104.0 12.4 78 66-154 27-105 (105)
8 3h8u_A Uncharacterized conserv 99.6 5.4E-15 1.9E-19 108.9 12.4 105 33-155 12-118 (125)
9 3ibm_A Cupin 2, conserved barr 99.6 1.2E-14 4.2E-19 113.5 15.0 95 49-154 37-133 (167)
10 1o4t_A Putative oxalate decarb 99.6 9.2E-15 3.1E-19 109.7 12.7 113 28-151 13-131 (133)
11 2fqp_A Hypothetical protein BP 99.6 1.1E-14 3.8E-19 103.3 12.2 75 66-151 17-94 (97)
12 1sfn_A Conserved hypothetical 99.6 4.5E-14 1.5E-18 116.6 16.4 109 30-151 129-239 (246)
13 4e2q_A Ureidoglycine aminohydr 99.6 4.3E-14 1.5E-18 118.4 14.8 109 29-150 150-259 (266)
14 4e2g_A Cupin 2 conserved barre 99.6 3.5E-14 1.2E-18 104.5 12.5 88 49-154 29-116 (126)
15 2pfw_A Cupin 2, conserved barr 99.6 8.6E-14 2.9E-18 100.8 14.0 102 34-154 7-108 (116)
16 1vj2_A Novel manganese-contain 99.6 4E-14 1.4E-18 105.0 12.4 78 65-153 46-123 (126)
17 2gu9_A Tetracenomycin polyketi 99.6 5E-14 1.7E-18 100.9 11.6 78 66-154 20-100 (113)
18 3es1_A Cupin 2, conserved barr 99.5 1.9E-14 6.6E-19 113.4 9.6 76 65-152 77-153 (172)
19 3fjs_A Uncharacterized protein 99.5 6.3E-14 2.1E-18 102.6 11.6 76 66-154 35-110 (114)
20 2f4p_A Hypothetical protein TM 99.5 7E-14 2.4E-18 106.8 11.9 95 65-172 46-140 (147)
21 2b8m_A Hypothetical protein MJ 99.5 6.1E-14 2.1E-18 102.2 10.8 78 66-154 26-104 (117)
22 2bnm_A Epoxidase; oxidoreducta 99.5 1.4E-13 5E-18 108.9 13.4 75 65-150 115-197 (198)
23 1sef_A Conserved hypothetical 99.5 3E-13 1E-17 113.1 15.7 110 30-151 146-257 (274)
24 1yhf_A Hypothetical protein SP 99.5 2.5E-13 8.5E-18 98.2 13.1 87 49-153 27-113 (115)
25 3lag_A Uncharacterized protein 99.5 1.1E-14 3.8E-19 104.4 5.6 78 66-151 16-94 (98)
26 1rc6_A Hypothetical protein YL 99.5 1.5E-13 5E-18 114.1 13.1 110 30-151 143-254 (261)
27 1y9q_A Transcriptional regulat 99.5 2E-13 7E-18 107.8 13.3 94 49-156 88-183 (192)
28 2cav_A Protein (canavalin); vi 99.5 6.5E-14 2.2E-18 125.0 11.3 78 66-152 85-165 (445)
29 2vpv_A Protein MIF2, MIF2P; nu 99.5 1.1E-13 3.8E-18 108.4 11.0 77 66-153 87-165 (166)
30 2oa2_A BH2720 protein; 1017534 99.5 1.6E-13 5.6E-18 104.5 11.4 84 66-154 42-126 (148)
31 2q30_A Uncharacterized protein 99.5 6.3E-13 2.2E-17 94.9 13.3 101 33-153 6-109 (110)
32 3h7j_A Bacilysin biosynthesis 99.5 1.4E-13 4.6E-18 113.3 10.7 79 66-155 144-223 (243)
33 3cew_A Uncharacterized cupin p 99.5 3.7E-13 1.3E-17 99.2 11.6 80 65-155 24-105 (125)
34 1x82_A Glucose-6-phosphate iso 99.5 1E-12 3.5E-17 104.6 14.9 118 30-154 19-157 (190)
35 1j58_A YVRK protein; cupin, de 99.5 2.4E-13 8.1E-18 118.3 11.5 119 33-164 225-349 (385)
36 2xlg_A SLL1785 protein, CUCA; 99.5 1.3E-13 4.6E-18 113.8 9.4 88 61-150 38-137 (239)
37 2o8q_A Hypothetical protein; c 99.5 1.4E-12 4.9E-17 97.0 14.0 80 68-159 44-125 (134)
38 4i4a_A Similar to unknown prot 99.5 5.3E-13 1.8E-17 98.4 11.1 79 65-154 32-110 (128)
39 1dgw_A Canavalin; duplicated s 99.5 5.5E-13 1.9E-17 105.1 11.3 79 62-151 36-119 (178)
40 1sq4_A GLXB, glyoxylate-induce 99.4 5.7E-13 2E-17 112.0 11.9 109 30-151 153-265 (278)
41 1y3t_A Hypothetical protein YX 99.4 9E-13 3.1E-17 111.9 12.4 111 32-157 14-125 (337)
42 1rc6_A Hypothetical protein YL 99.4 7.7E-13 2.6E-17 109.7 11.1 112 27-151 20-134 (261)
43 1fi2_A Oxalate oxidase, germin 99.4 1.3E-12 4.4E-17 104.7 11.7 87 66-155 71-158 (201)
44 3lwc_A Uncharacterized protein 99.4 8E-13 2.7E-17 97.9 9.4 76 65-153 38-113 (119)
45 4h7l_A Uncharacterized protein 99.4 7.9E-13 2.7E-17 102.6 9.7 106 28-154 12-120 (157)
46 1sq4_A GLXB, glyoxylate-induce 99.4 1.3E-12 4.5E-17 109.8 11.9 76 65-151 66-143 (278)
47 4e2q_A Ureidoglycine aminohydr 99.4 1.4E-12 4.9E-17 109.2 11.7 110 26-150 30-141 (266)
48 2vqa_A SLL1358 protein, MNCA; 99.4 8.7E-13 3E-17 113.6 10.7 91 65-164 232-326 (361)
49 2ozj_A Cupin 2, conserved barr 99.4 2.3E-12 7.9E-17 93.3 10.7 74 66-152 37-110 (114)
50 2ozi_A Hypothetical protein RP 99.4 3.9E-13 1.3E-17 96.5 6.3 78 66-151 16-94 (98)
51 1sef_A Conserved hypothetical 99.4 1.5E-12 5.1E-17 108.9 9.9 113 26-151 22-137 (274)
52 2opk_A Hypothetical protein; p 99.4 2.7E-11 9.2E-16 88.3 15.2 78 66-152 30-110 (112)
53 3h7j_A Bacilysin biosynthesis 99.4 4.1E-12 1.4E-16 104.4 11.7 87 49-152 22-109 (243)
54 2vqa_A SLL1358 protein, MNCA; 99.4 7.3E-12 2.5E-16 107.8 13.5 112 33-155 20-135 (361)
55 3rns_A Cupin 2 conserved barre 99.4 1.2E-11 4E-16 100.7 13.6 74 66-151 152-225 (227)
56 2pyt_A Ethanolamine utilizatio 99.4 7.2E-12 2.5E-16 94.5 11.1 73 66-154 56-129 (133)
57 3rns_A Cupin 2 conserved barre 99.3 1.6E-11 5.4E-16 100.0 13.7 100 33-152 10-109 (227)
58 3bu7_A Gentisate 1,2-dioxygena 99.3 5.1E-12 1.7E-16 111.1 10.9 80 65-155 292-372 (394)
59 2d40_A Z3393, putative gentisa 99.3 5.9E-12 2E-16 109.2 10.8 78 65-153 98-176 (354)
60 3nw4_A Gentisate 1,2-dioxygena 99.3 2.6E-12 9E-17 111.9 8.2 81 65-156 101-182 (368)
61 4b29_A Dimethylsulfoniopropion 99.3 7.8E-12 2.7E-16 101.4 10.3 80 65-155 130-209 (217)
62 1juh_A Quercetin 2,3-dioxygena 99.3 1.2E-11 4E-16 107.1 11.9 79 66-157 47-134 (350)
63 1y3t_A Hypothetical protein YX 99.3 2.6E-11 9E-16 102.8 13.1 76 70-157 220-297 (337)
64 3bu7_A Gentisate 1,2-dioxygena 99.3 1E-11 3.5E-16 109.2 10.4 80 65-155 121-202 (394)
65 1fxz_A Glycinin G1; proglycini 99.3 3.9E-11 1.3E-15 107.8 13.1 93 66-165 337-434 (476)
66 1j58_A YVRK protein; cupin, de 99.3 4.3E-11 1.5E-15 104.0 12.4 110 34-155 48-160 (385)
67 3c3v_A Arachin ARAH3 isoform; 99.2 7.9E-11 2.7E-15 106.5 13.7 93 66-165 371-468 (510)
68 1uij_A Beta subunit of beta co 99.2 3.4E-11 1.2E-15 106.6 10.8 79 63-151 45-127 (416)
69 1sfn_A Conserved hypothetical 99.2 7.3E-11 2.5E-15 97.2 12.0 72 65-151 48-119 (246)
70 4axo_A EUTQ, ethanolamine util 99.2 1.2E-10 4.1E-15 89.8 11.8 74 66-155 65-139 (151)
71 2i45_A Hypothetical protein; n 99.2 3.8E-11 1.3E-15 85.9 8.1 65 72-150 33-99 (107)
72 2d40_A Z3393, putative gentisa 99.2 6.5E-11 2.2E-15 102.6 9.7 78 66-156 267-344 (354)
73 2d5f_A Glycinin A3B4 subunit; 99.1 9.3E-11 3.2E-15 105.8 8.9 92 66-164 366-459 (493)
74 2ea7_A 7S globulin-1; beta bar 99.1 1.3E-10 4.5E-15 103.4 9.3 82 63-151 57-139 (434)
75 1juh_A Quercetin 2,3-dioxygena 99.1 7.4E-10 2.5E-14 95.7 13.3 81 65-157 247-332 (350)
76 3d82_A Cupin 2, conserved barr 99.1 3.8E-10 1.3E-14 79.2 9.4 60 78-150 40-100 (102)
77 3cjx_A Protein of unknown func 99.1 2.1E-09 7.1E-14 84.0 14.1 108 31-152 8-118 (165)
78 2e9q_A 11S globulin subunit be 99.1 4.8E-10 1.6E-14 100.3 11.7 97 61-164 314-417 (459)
79 1o5u_A Novel thermotoga mariti 99.1 1.7E-10 5.7E-15 83.1 7.1 58 71-140 35-93 (101)
80 2e9q_A 11S globulin subunit be 99.1 6.5E-10 2.2E-14 99.5 12.3 84 66-152 62-163 (459)
81 1fxz_A Glycinin G1; proglycini 99.1 4.1E-10 1.4E-14 101.2 9.9 85 66-151 47-148 (476)
82 2o1q_A Putative acetyl/propion 99.1 5.9E-10 2E-14 85.0 9.2 105 35-153 11-120 (145)
83 2d5f_A Glycinin A3B4 subunit; 99.0 8.7E-10 3E-14 99.5 10.9 85 66-151 44-148 (493)
84 3kgl_A Cruciferin; 11S SEED gl 99.0 9.7E-10 3.3E-14 98.4 10.9 97 61-164 315-418 (466)
85 3nw4_A Gentisate 1,2-dioxygena 99.0 1.2E-09 4.1E-14 95.2 10.7 79 65-156 277-355 (368)
86 3bcw_A Uncharacterized protein 99.0 6.4E-10 2.2E-14 82.8 7.2 72 66-150 48-120 (123)
87 3ebr_A Uncharacterized RMLC-li 99.0 4.1E-09 1.4E-13 81.8 11.6 90 48-153 26-117 (159)
88 3qac_A 11S globulin SEED stora 99.0 1.5E-09 5.1E-14 97.1 9.7 86 66-152 49-166 (465)
89 2phl_A Phaseolin; plant SEED s 99.0 1.1E-09 3.7E-14 96.4 8.7 77 66-151 51-136 (397)
90 3c3v_A Arachin ARAH3 isoform; 99.0 1.9E-09 6.4E-14 97.5 9.7 85 65-153 46-163 (510)
91 3fz3_A Prunin; TREE NUT allerg 99.0 2.6E-09 8.9E-14 96.6 10.4 79 66-151 393-473 (531)
92 3ksc_A LEGA class, prolegumin; 98.9 1E-08 3.5E-13 92.4 12.8 113 34-153 322-439 (496)
93 2q1z_B Anti-sigma factor CHRR, 98.9 7E-09 2.4E-13 82.8 10.5 84 48-151 111-194 (195)
94 3kgl_A Cruciferin; 11S SEED gl 98.9 1.1E-08 3.8E-13 91.5 11.5 86 66-152 42-181 (466)
95 1vr3_A Acireductone dioxygenas 98.9 2.5E-08 8.5E-13 79.6 12.1 81 68-154 75-165 (191)
96 3eqe_A Putative cystein deoxyg 98.9 3.9E-08 1.3E-12 77.1 12.4 91 66-161 68-162 (171)
97 2phl_A Phaseolin; plant SEED s 98.9 1.2E-08 4E-13 89.8 10.4 80 65-152 237-324 (397)
98 3ksc_A LEGA class, prolegumin; 98.9 9.2E-09 3.1E-13 92.7 9.9 82 66-151 45-145 (496)
99 2y0o_A Probable D-lyxose ketol 98.8 6E-08 2.1E-12 76.3 12.3 99 45-152 36-154 (175)
100 3s7i_A Allergen ARA H 1, clone 98.8 1.2E-08 4.3E-13 90.2 9.1 80 62-150 39-121 (418)
101 1uij_A Beta subunit of beta co 98.8 2.3E-08 8E-13 88.4 10.3 85 66-153 248-342 (416)
102 1zrr_A E-2/E-2' protein; nicke 98.8 4.5E-09 1.5E-13 83.1 5.0 65 80-153 93-159 (179)
103 2ea7_A 7S globulin-1; beta bar 98.8 2.6E-08 8.9E-13 88.5 10.0 85 66-153 265-358 (434)
104 3qac_A 11S globulin SEED stora 98.7 6.1E-08 2.1E-12 86.7 11.0 80 66-152 322-403 (465)
105 2arc_A ARAC, arabinose operon 98.7 1.7E-07 5.9E-12 70.5 11.2 75 70-154 16-95 (164)
106 3o14_A Anti-ecfsigma factor, C 98.7 2.5E-07 8.5E-12 75.4 12.4 100 33-151 11-110 (223)
107 1yfu_A 3-hydroxyanthranilate-3 98.7 1.1E-07 3.7E-12 74.5 9.7 74 73-153 41-114 (174)
108 2gm6_A Cysteine dioxygenase ty 98.7 6.2E-07 2.1E-11 72.3 14.2 87 65-155 77-170 (208)
109 3bal_A Acetylacetone-cleaving 98.6 3.6E-07 1.2E-11 70.4 10.2 107 32-151 10-120 (153)
110 2cav_A Protein (canavalin); vi 98.6 2.3E-07 7.8E-12 82.7 9.7 77 66-150 280-368 (445)
111 3fz3_A Prunin; TREE NUT allerg 98.6 2.7E-07 9.2E-12 83.5 10.2 82 66-151 47-207 (531)
112 3es4_A Uncharacterized protein 98.5 3.2E-06 1.1E-10 62.2 13.6 96 33-140 4-105 (116)
113 1zvf_A 3-hydroxyanthranilate 3 98.5 6.2E-07 2.1E-11 70.1 8.8 76 75-154 42-117 (176)
114 3st7_A Capsular polysaccharide 98.4 5.2E-07 1.8E-11 76.9 8.5 77 68-151 273-354 (369)
115 3eln_A Cysteine dioxygenase ty 98.4 1.6E-06 5.6E-11 69.5 10.7 95 65-161 68-168 (200)
116 3s7i_A Allergen ARA H 1, clone 98.4 5.5E-07 1.9E-11 79.7 8.6 82 66-150 262-364 (418)
117 3uss_A Putative uncharacterize 98.2 2.4E-05 8.1E-10 63.2 13.1 88 65-155 71-164 (211)
118 2qnk_A 3-hydroxyanthranilate 3 98.2 3E-06 1E-10 70.9 7.4 66 75-150 39-105 (286)
119 3d0j_A Uncharacterized protein 98.2 5.1E-06 1.8E-10 62.8 7.3 80 68-152 26-110 (140)
120 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.1 1.2E-05 4.1E-10 61.0 7.9 76 71-154 39-116 (141)
121 3kmh_A D-lyxose isomerase; cup 98.1 0.00014 4.8E-09 59.4 14.4 124 37-162 73-221 (246)
122 3myx_A Uncharacterized protein 98.0 6.1E-05 2.1E-09 61.8 11.0 72 66-151 46-117 (238)
123 3gbg_A TCP pilus virulence reg 97.9 4E-05 1.4E-09 62.7 8.6 75 64-150 4-85 (276)
124 3ejk_A DTDP sugar isomerase; Y 97.7 0.00034 1.2E-08 54.7 11.0 81 70-151 56-141 (174)
125 1dgw_X Canavalin; duplicated s 97.6 8.5E-05 2.9E-09 50.8 4.7 37 66-102 35-72 (79)
126 3myx_A Uncharacterized protein 97.5 0.00067 2.3E-08 55.6 10.1 65 66-140 166-230 (238)
127 2vec_A YHAK, pirin-like protei 97.5 0.0013 4.3E-08 54.5 11.2 72 69-150 66-141 (256)
128 3o14_A Anti-ecfsigma factor, C 97.3 0.00077 2.6E-08 54.6 8.0 64 68-148 147-210 (223)
129 1tq5_A Protein YHHW; bicupin, 97.2 0.0031 1.1E-07 51.6 10.8 76 69-154 43-122 (242)
130 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.2 0.0018 6.2E-08 51.6 8.9 81 68-151 61-143 (197)
131 1wlt_A 176AA long hypothetical 97.0 0.0045 1.6E-07 49.2 9.8 82 68-151 66-154 (196)
132 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.0 0.0043 1.5E-07 48.9 9.5 75 75-151 56-136 (185)
133 2ixk_A DTDP-4-dehydrorhamnose 97.0 0.005 1.7E-07 48.4 9.6 75 75-151 57-137 (184)
134 1yud_A Hypothetical protein SO 96.9 0.0067 2.3E-07 47.2 9.8 104 46-155 26-137 (170)
135 3ryk_A DTDP-4-dehydrorhamnose 96.9 0.0064 2.2E-07 48.7 9.7 74 75-150 78-158 (205)
136 1dzr_A DTDP-4-dehydrorhamnose 96.9 0.0067 2.3E-07 47.7 9.6 74 75-150 55-135 (183)
137 1oi6_A PCZA361.16; epimerase, 96.9 0.012 4.1E-07 47.0 11.1 81 69-151 49-136 (205)
138 1upi_A DTDP-4-dehydrorhamnose 96.8 0.015 5.1E-07 47.1 11.3 78 71-150 70-154 (225)
139 2qnk_A 3-hydroxyanthranilate 3 96.8 0.0056 1.9E-07 51.1 8.7 66 74-153 214-279 (286)
140 2c0z_A NOVW; isomerase, epimer 96.8 0.01 3.6E-07 47.8 9.9 74 75-150 63-143 (216)
141 4gjz_A Lysine-specific demethy 96.4 0.014 4.8E-07 45.9 8.5 66 75-140 132-226 (235)
142 1vrb_A Putative asparaginyl hy 96.4 0.026 9E-07 48.2 10.4 68 73-140 146-243 (342)
143 3rcq_A Aspartyl/asparaginyl be 96.0 0.055 1.9E-06 42.9 9.7 77 68-155 103-186 (197)
144 3bb6_A Uncharacterized protein 96.0 0.035 1.2E-06 41.1 7.9 69 76-150 23-99 (127)
145 4hn1_A Putative 3-epimerase in 95.9 0.11 3.8E-06 41.3 11.3 75 74-150 51-132 (201)
146 2qjv_A Uncharacterized IOLB-li 95.5 0.14 4.7E-06 42.6 10.8 115 29-153 114-248 (270)
147 1pmi_A PMI, phosphomannose iso 94.8 0.16 5.4E-06 45.0 9.8 76 65-149 355-436 (440)
148 3d8c_A Hypoxia-inducible facto 94.7 0.091 3.1E-06 44.9 7.7 66 75-140 191-286 (349)
149 2p17_A Pirin-like protein; GK1 94.6 0.3 1E-05 40.4 10.4 68 73-151 45-116 (277)
150 2qjv_A Uncharacterized IOLB-li 94.6 0.25 8.7E-06 40.9 9.8 85 61-151 23-110 (270)
151 1e5r_A Proline oxidase; oxidor 94.5 0.074 2.5E-06 44.6 6.4 85 68-168 92-187 (290)
152 3kv4_A PHD finger protein 8; e 94.2 0.04 1.4E-06 49.0 4.3 104 74-178 238-365 (447)
153 2qdr_A Uncharacterized protein 94.0 2 6.7E-05 35.6 13.6 78 55-152 83-162 (303)
154 3al5_A HTYW5, JMJC domain-cont 94.0 0.19 6.6E-06 42.6 8.1 67 74-140 174-265 (338)
155 2xdv_A MYC-induced nuclear ant 93.9 0.54 1.8E-05 41.5 11.1 65 75-139 147-223 (442)
156 2oyz_A UPF0345 protein VPA0057 93.8 0.35 1.2E-05 33.8 7.8 63 74-150 30-93 (94)
157 1eyb_A Homogentisate 1,2-dioxy 93.8 2.4 8.2E-05 37.7 14.9 70 66-150 156-228 (471)
158 3hqx_A UPF0345 protein aciad03 93.5 1 3.4E-05 32.4 9.9 66 73-150 43-109 (111)
159 1j1l_A Pirin; beta sandwich, c 93.4 0.29 1E-05 40.9 8.1 70 71-151 44-118 (290)
160 3kv5_D JMJC domain-containing 93.1 0.055 1.9E-06 48.5 3.3 67 74-140 273-361 (488)
161 2yu1_A JMJC domain-containing 92.8 0.13 4.6E-06 45.6 5.3 69 72-140 201-291 (451)
162 1tq5_A Protein YHHW; bicupin, 92.7 0.85 2.9E-05 37.0 9.7 71 66-153 159-230 (242)
163 1qwr_A Mannose-6-phosphate iso 92.5 0.23 7.9E-06 41.9 6.2 58 66-135 250-308 (319)
164 4diq_A Lysine-specific demethy 92.5 1.5 5E-05 39.3 11.6 67 74-140 171-253 (489)
165 2wfp_A Mannose-6-phosphate iso 92.3 0.25 8.6E-06 43.0 6.4 60 65-136 322-382 (394)
166 1ywk_A 4-deoxy-L-threo-5-hexos 92.2 0.79 2.7E-05 38.3 9.0 70 72-151 62-134 (289)
167 3dl3_A Tellurite resistance pr 92.1 0.48 1.7E-05 34.5 6.8 54 89-148 40-94 (119)
168 2p17_A Pirin-like protein; GK1 92.0 1.5 5E-05 36.3 10.5 77 65-156 165-247 (277)
169 1j1l_A Pirin; beta sandwich, c 91.7 1.5 5.2E-05 36.5 10.3 80 66-156 168-248 (290)
170 1qwr_A Mannose-6-phosphate iso 91.1 0.39 1.3E-05 40.5 6.2 31 117-152 160-190 (319)
171 3k3o_A PHF8, PHD finger protei 90.4 0.32 1.1E-05 42.1 5.1 67 74-140 154-242 (371)
172 3eo6_A Protein of unknown func 90.0 0.88 3E-05 32.4 6.2 62 74-149 43-105 (106)
173 1zx5_A Mannosephosphate isomer 89.5 0.63 2.2E-05 38.9 6.0 57 66-136 229-287 (300)
174 2ypd_A Probable JMJC domain-co 88.9 0.3 1E-05 42.5 3.6 25 116-140 294-318 (392)
175 3pua_A GRC5, PHD finger protei 88.7 0.44 1.5E-05 41.5 4.6 67 74-140 181-269 (392)
176 2rg4_A Uncharacterized protein 88.0 2.9 9.8E-05 33.0 8.7 83 67-150 103-203 (216)
177 2vec_A YHAK, pirin-like protei 88.0 3.9 0.00014 33.3 9.7 73 66-150 181-253 (256)
178 3esg_A HUTD, putative uncharac 87.5 6.3 0.00022 30.9 10.2 106 35-154 13-123 (193)
179 3k2o_A Bifunctional arginine d 86.4 0.63 2.2E-05 39.6 4.2 66 75-140 180-281 (336)
180 1xru_A 4-deoxy-L-threo-5-hexos 85.8 7.6 0.00026 32.2 10.3 111 33-154 142-266 (282)
181 1xru_A 4-deoxy-L-threo-5-hexos 85.3 2.4 8E-05 35.3 7.0 55 87-151 78-134 (282)
182 3pna_A CAMP-dependent protein 83.5 2.8 9.5E-05 30.1 6.1 46 71-125 63-108 (154)
183 1zx5_A Mannosephosphate isomer 82.7 0.73 2.5E-05 38.5 2.9 20 117-136 160-179 (300)
184 3ocp_A PRKG1 protein; serine/t 82.4 3.3 0.00011 28.9 6.0 46 71-125 48-93 (139)
185 2qdr_A Uncharacterized protein 81.7 4.8 0.00016 33.3 7.3 87 23-134 174-264 (303)
186 4f8a_A Potassium voltage-gated 81.4 3.8 0.00013 29.1 6.2 47 72-127 53-99 (160)
187 1ywk_A 4-deoxy-L-threo-5-hexos 79.6 25 0.00087 29.1 13.1 117 30-154 139-266 (289)
188 2pqq_A Putative transcriptiona 78.9 3 0.0001 29.2 4.8 48 71-125 30-80 (149)
189 2z69_A DNR protein; beta barre 78.2 2.6 8.9E-05 29.7 4.3 70 71-150 37-115 (154)
190 2wfp_A Mannose-6-phosphate iso 78.2 1.4 4.7E-05 38.3 3.2 21 117-137 242-262 (394)
191 1yll_A PA5104, conserved hypot 77.9 20 0.00069 28.0 9.7 105 35-154 8-118 (200)
192 3g7d_A PHPD; non heme Fe(II) d 77.7 2.5 8.6E-05 36.2 4.5 65 87-165 354-418 (443)
193 1ft9_A Carbon monoxide oxidati 77.2 17 0.00058 27.4 9.0 66 72-149 26-93 (222)
194 3bpz_A Potassium/sodium hyperp 76.7 3.5 0.00012 31.1 4.8 46 71-125 97-142 (202)
195 3dn7_A Cyclic nucleotide bindi 76.4 5.9 0.0002 29.2 6.0 70 71-150 32-110 (194)
196 3dv8_A Transcriptional regulat 75.8 5.4 0.00018 30.0 5.7 48 71-125 28-78 (220)
197 3fx3_A Cyclic nucleotide-bindi 75.4 6.2 0.00021 30.1 6.1 69 71-149 36-112 (237)
198 3idb_B CAMP-dependent protein 75.1 7.7 0.00026 27.8 6.2 48 71-125 63-112 (161)
199 1pmi_A PMI, phosphomannose iso 74.8 1.9 6.5E-05 38.0 3.2 21 117-137 268-288 (440)
200 3ukn_A Novel protein similar t 74.6 4.1 0.00014 30.9 4.8 48 70-126 99-146 (212)
201 3mdp_A Cyclic nucleotide-bindi 74.2 4.7 0.00016 27.9 4.7 33 70-102 30-62 (142)
202 3of1_A CAMP-dependent protein 74.1 3.8 0.00013 31.3 4.6 67 71-149 32-103 (246)
203 2qcs_B CAMP-dependent protein 73.9 6.1 0.00021 31.2 5.8 47 70-125 63-109 (291)
204 3kv9_A JMJC domain-containing 73.3 1.9 6.5E-05 37.6 2.8 66 75-140 183-270 (397)
205 4ev0_A Transcription regulator 72.8 6.2 0.00021 29.6 5.4 69 71-149 24-100 (216)
206 3iwz_A CAP-like, catabolite ac 72.7 7 0.00024 29.5 5.7 49 71-126 36-87 (230)
207 1dgw_Y Canavalin; duplicated s 72.6 10 0.00035 26.1 5.9 33 118-153 9-41 (93)
208 1znp_A Hypothetical protein AT 72.5 28 0.00097 26.1 10.8 101 46-155 19-128 (154)
209 2fmy_A COOA, carbon monoxide o 72.4 22 0.00075 26.6 8.6 68 71-150 29-98 (220)
210 3e97_A Transcriptional regulat 72.1 8.2 0.00028 29.3 6.0 49 70-125 30-81 (231)
211 3pur_A Lysine-specific demethy 72.1 2.3 8E-05 38.3 3.1 25 116-140 367-391 (528)
212 3d0s_A Transcriptional regulat 71.9 7.5 0.00026 29.4 5.8 69 72-150 32-108 (227)
213 3shr_A CGMP-dependent protein 71.7 6.4 0.00022 31.4 5.5 46 71-125 64-109 (299)
214 3b02_A Transcriptional regulat 71.3 5.9 0.0002 29.5 4.9 32 87-125 17-51 (195)
215 1zyb_A Transcription regulator 71.2 5.8 0.0002 30.5 5.0 71 70-150 44-123 (232)
216 2oz6_A Virulence factor regula 70.1 10 0.00035 28.1 6.0 48 71-125 15-65 (207)
217 1vp6_A CNBD, cyclic-nucleotide 69.7 5.3 0.00018 27.6 4.1 44 71-125 36-79 (138)
218 3ryp_A Catabolite gene activat 68.4 8 0.00027 28.8 5.1 70 71-150 21-99 (210)
219 1o5l_A Transcriptional regulat 68.4 7.9 0.00027 29.2 5.1 70 71-150 24-102 (213)
220 2zcw_A TTHA1359, transcription 67.3 7.9 0.00027 28.9 4.9 68 72-149 8-84 (202)
221 2ptm_A Hyperpolarization-activ 67.3 7 0.00024 29.2 4.6 48 70-125 95-142 (198)
222 2gau_A Transcriptional regulat 67.2 7.4 0.00025 29.6 4.8 71 70-150 34-112 (232)
223 3la7_A Global nitrogen regulat 67.0 9.6 0.00033 29.5 5.5 49 70-125 44-95 (243)
224 3gyd_A CNMP-BD protein, cyclic 66.4 12 0.00042 27.7 5.8 48 71-125 64-114 (187)
225 3kcc_A Catabolite gene activat 63.4 10 0.00036 29.7 5.1 49 70-125 70-121 (260)
226 2d93_A RAP guanine nucleotide 62.7 6.3 0.00022 27.3 3.3 46 71-125 41-87 (134)
227 3e6c_C CPRK, cyclic nucleotide 59.8 16 0.00055 28.2 5.5 69 71-149 34-107 (250)
228 3dkw_A DNR protein; CRP-FNR, H 58.4 5.1 0.00017 30.3 2.3 48 72-126 35-85 (227)
229 3loi_A Putative uncharacterize 57.3 62 0.0021 24.7 9.4 64 68-137 54-126 (172)
230 4din_B CAMP-dependent protein 56.8 9.3 0.00032 32.2 3.9 48 69-125 153-200 (381)
231 2xxz_A Lysine-specific demethy 56.7 7.2 0.00025 33.1 3.1 22 119-140 283-304 (332)
232 3m3i_A Putative uncharacterize 56.1 74 0.0025 25.3 8.8 58 44-101 31-95 (225)
233 1skh_A Major prion protein 2; 55.2 7.9 0.00027 21.0 2.0 30 1-33 1-30 (30)
234 3of1_A CAMP-dependent protein 54.3 21 0.00072 26.9 5.3 47 71-125 150-196 (246)
235 2opw_A Phyhd1 protein; double- 52.0 28 0.00094 27.8 5.9 51 116-166 229-280 (291)
236 1yll_A PA5104, conserved hypot 51.4 31 0.0011 26.9 5.8 37 87-132 140-176 (200)
237 2bgc_A PRFA; bacterial infecti 50.5 16 0.00056 27.9 4.1 69 72-150 21-99 (238)
238 2qcs_B CAMP-dependent protein 50.3 28 0.00097 27.2 5.6 49 70-125 181-233 (291)
239 3avr_A Lysine-specific demethy 44.8 14 0.00047 33.4 3.1 23 118-140 341-363 (531)
240 3g7d_A PHPD; non heme Fe(II) d 43.0 37 0.0013 29.1 5.3 98 69-168 111-218 (443)
241 3tnp_B CAMP-dependent protein 42.3 36 0.0012 28.9 5.4 71 69-149 168-245 (416)
242 4ava_A Lysine acetyltransferas 41.5 25 0.00086 28.3 4.1 71 71-149 38-113 (333)
243 4ask_A Lysine-specific demethy 40.7 18 0.0006 32.5 3.1 23 118-140 316-338 (510)
244 1wgp_A Probable cyclic nucleot 40.5 8.4 0.00029 26.5 0.8 16 87-102 47-62 (137)
245 3shr_A CGMP-dependent protein 40.3 39 0.0013 26.6 5.0 48 71-125 182-233 (299)
246 4f7z_A RAP guanine nucleotide 38.1 44 0.0015 31.8 5.6 36 69-104 65-100 (999)
247 2bdr_A Ureidoglycolate hydrola 37.8 76 0.0026 24.1 6.0 69 81-150 72-142 (175)
248 1o7f_A CAMP-dependent RAP1 gua 36.9 60 0.0021 27.4 5.9 46 72-125 364-409 (469)
249 1o7f_A CAMP-dependent RAP1 gua 33.0 55 0.0019 27.6 5.0 70 71-150 67-145 (469)
250 2fct_A Syringomycin biosynthes 30.5 52 0.0018 26.5 4.3 23 116-138 221-244 (313)
251 3tnp_B CAMP-dependent protein 30.5 56 0.0019 27.7 4.6 33 71-103 292-324 (416)
252 1xsq_A Ureidoglycolate hydrola 28.6 1.9E+02 0.0064 21.7 8.6 80 68-150 53-140 (168)
253 3cf6_E RAP guanine nucleotide 28.0 74 0.0025 29.2 5.2 69 72-150 59-132 (694)
254 1xe7_A YML079WP, hypothetical 24.0 2.5E+02 0.0087 21.8 9.4 64 69-138 81-152 (203)
255 4f7z_A RAP guanine nucleotide 20.5 1.5E+02 0.0051 28.1 5.9 54 87-150 379-437 (999)
256 1gpp_A Endonuclease PI-SCEI; h 20.3 96 0.0033 24.9 3.8 54 90-151 9-62 (237)
257 4ank_A Transthyretin; hormone 20.2 1.6E+02 0.0055 21.7 4.9 36 1-38 1-36 (147)
258 2a3m_A COG3005: nitrate/TMAO r 20.1 23 0.00077 25.5 0.1 8 1-8 1-8 (130)
259 2lok_A Uncharacterized protein 20.1 2.9E+02 0.01 21.3 6.5 36 86-128 79-116 (197)
No 1
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.94 E-value=2.3e-26 Score=178.66 Aligned_cols=159 Identities=68% Similarity=1.218 Sum_probs=130.3
Q ss_pred cCCCeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeec
Q 029565 30 KGFPLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEK 109 (191)
Q Consensus 30 ~~~~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l 109 (191)
+..++|+++++++...+..+|.....+......|...+.+...+++||...++|+|...|++||++|++++.+++.. ..
T Consensus 4 ~~~~~v~~~~~~~~~~~~~~G~~~~~l~~~~~~g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~-~~ 82 (163)
T 1lr5_A 4 RDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSS-LK 82 (163)
T ss_dssp CCCCSEEEGGGSCCBCTTCTTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSS-SS
T ss_pred CCccEecChHHCChhhccCCCcceEEEeccccCCCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCcc-cc
Confidence 45678999999999887667877666655433455579999999999999999999999999999999999999810 00
Q ss_pred CCCCCceeeecCCeEEEECCCCcEEEEeCC-CCCcEEEEEEEeCCCceeeecCCCCCcccccccCccccccccCCCCCCC
Q 029565 110 HPGKPQEHFFFANSTFHIPVNDAHQVWNTN-ENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWDEQCLQSPVK 188 (191)
Q Consensus 110 ~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g-~~e~~~~l~v~~~p~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (191)
..++.+.+.+.+||++++|+|++|+++|.+ + ++++++++..+++.+..++++|+++.+++++.+|+.|+++|+++ .|
T Consensus 83 ~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~-~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (163)
T 1lr5_A 83 YPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEH-EDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA-AK 160 (163)
T ss_dssp SCCSCEEEEECTTEEEEECTTCCEEEECCCSS-SCEEEEEEEESSSCCEEEESSTTSCGGGCEEESSCTTTHHHHHH-TC
T ss_pred ccCccEEEEeCCCCEEEECCCCcEEeEeCCCC-CCEEEEEEECCCCcccccccccccCCcCccceeccccccccccc-hh
Confidence 001111268899999999999999999998 7 69999999998888888899999999999999999999999999 99
Q ss_pred CCC
Q 029565 189 DEL 191 (191)
Q Consensus 189 ~~~ 191 (191)
+||
T Consensus 161 ~~~ 163 (163)
T 1lr5_A 161 EQL 163 (163)
T ss_dssp ---
T ss_pred hcC
Confidence 997
No 2
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.69 E-value=2.2e-16 Score=121.84 Aligned_cols=113 Identities=24% Similarity=0.294 Sum_probs=94.1
Q ss_pred cCCceeEEEEEEEECCCC-cCCceec-CCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCC-CcEEEEe
Q 029565 61 LHGMKEIEVWLQTFSPGT-RTPIHRH-SCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVN-DAHQVWN 137 (191)
Q Consensus 61 ~~g~~~~~~~~~~i~PG~-~~~~H~H-~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g-~~H~~~N 137 (191)
..+...+++...+++||. ..++|+| ..+|++||++|++++.++++. +.+.+||++++|+| .+|+++|
T Consensus 40 ~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~----------~~l~~Gd~i~i~~~~~~H~~~n 109 (162)
T 3l2h_A 40 AVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQ----------YPIAPGDFVGFPCHAAAHSISN 109 (162)
T ss_dssp HHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEE----------EEECTTCEEEECTTSCCEEEEC
T ss_pred CCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEE----------EEeCCCCEEEECCCCceEEeEe
Confidence 345568999999999999 5899999 489999999999999999987 57889999999998 9999999
Q ss_pred CCCCCcEEEEEEEeCCCceeeecCCCCCcccccccCccccccccCCCC
Q 029565 138 TNENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWDEQCLQS 185 (191)
Q Consensus 138 ~g~~e~~~~l~v~~~p~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 185 (191)
.++ ++++++++.+++..+...|.|...-...++..+.+. +.+|.|.
T Consensus 110 ~~~-~~~~~l~v~~p~~~~~~~~pd~~~~~~~~~~~~~l~-~~~~~~~ 155 (162)
T 3l2h_A 110 DGT-ETLVCLVIGQRLDQDVVDYPNQHKRLYRNNGEWNLV-DMADIRV 155 (162)
T ss_dssp CSS-SCEEEEEEEECCSEEEEEETTTTEEEEEETTEEEEE-EGGGCEE
T ss_pred CCC-CCEEEEEEECCCCCCeEecCCCCcEEEecCCceeec-cHHHhHh
Confidence 999 699999999988887778877654445556666665 6666653
No 3
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.67 E-value=6e-16 Score=116.26 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=88.2
Q ss_pred CeeEecCCCCCCccCCCCcEEE---EEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEE--ECCeee
Q 029565 33 PLVRNISELPQDNYGREGLAHI---TVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLY--LASSSH 107 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~---~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~--i~~~~~ 107 (191)
..|.++++++......++..+. .+... ..+...+.+...+++||...++|+|+..|.+||++|++++. ++++.
T Consensus 3 m~v~~~~~v~~~~~~~~~~~g~~~~~l~~~-~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~- 80 (145)
T 3ht1_A 3 MKRVHRTDVKAEIVREPGAKETTHRKLIDT-PDGADRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQGRT- 80 (145)
T ss_dssp CCCCCGGGSCCEECCSTTCEEEEEEEEECG-GGTCCSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGTEE-
T ss_pred ceEeehhhCCHhHcCCCCCCCcEEEEEEcc-CCCCCcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECCEE-
Confidence 4567888888766653443333 33333 33445899999999999999999999989899999999999 99987
Q ss_pred ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 108 EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 108 ~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
+.+.+||++++|+|++|+++|.++ ++++++++..+.
T Consensus 81 ---------~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~~l~i~~~~ 116 (145)
T 3ht1_A 81 ---------EEVGPGEAIFIPRGEPHGFVTGPG-QTCRFLVVAPCE 116 (145)
T ss_dssp ---------EEECTTCEEEECTTCCBEEECCTT-CCEEEEEEEESC
T ss_pred ---------EEECCCCEEEECCCCeEEeEcCCC-CCEEEEEEECCC
Confidence 578899999999999999999998 589999988644
No 4
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.67 E-value=1.5e-15 Score=117.72 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=84.7
Q ss_pred ecCCCCCCccC------CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecC
Q 029565 37 NISELPQDNYG------REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKH 110 (191)
Q Consensus 37 ~i~d~~~~~~~------~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~ 110 (191)
++++++...+. ..|.....+.... . ..+.+...+++||+..+.|+|+.+|++||++|+++++++++.
T Consensus 11 ~w~~v~~~~~~~~~~~p~~g~~~~~L~~~~--~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v~g~~---- 83 (156)
T 3kgz_A 11 RWDGVAVMPYKQTAEAPFQDVSRQLLFADP--N-LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGETI---- 83 (156)
T ss_dssp EETTCCCEECCCCSSCSSEEEEEEEEECCT--T-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTEE----
T ss_pred CccccchhhcccCCCCCcCCeEEEEEEcCC--C-CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCEE----
Confidence 35565554443 2244444444432 2 478999999999999999999999999999999999999987
Q ss_pred CCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCc
Q 029565 111 PGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPV 155 (191)
Q Consensus 111 ~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~ 155 (191)
+.+.+||++++|+|++|+++|.++ ++++++++++++.-
T Consensus 84 ------~~l~~Gd~i~ip~~~~H~~~n~g~-~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 84 ------SDVAQGDLVFIPPMTWHQFRANRG-DCLGFLCVVNAARD 121 (156)
T ss_dssp ------EEEETTCEEEECTTCCEEEECCSS-SCEEEEEEEESSCC
T ss_pred ------EEeCCCCEEEECCCCcEEeEeCCC-CCEEEEEEEeCCCC
Confidence 478899999999999999999999 69999999976654
No 5
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.65 E-value=3.4e-15 Score=116.90 Aligned_cols=114 Identities=17% Similarity=0.217 Sum_probs=88.6
Q ss_pred CcccCCCeeEecCCCCCCccC------CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEE
Q 029565 27 CSIKGFPLVRNISELPQDNYG------REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTL 100 (191)
Q Consensus 27 ~~~~~~~~V~~i~d~~~~~~~------~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v 100 (191)
+......-..++++++...+. ..|.....+... .. ..+.+..++++||+..+.|+|..+|++||++|++++
T Consensus 10 ~~~~~~~~~~~w~~v~~~~~~~~~~~p~~gv~~r~L~~~--~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~ 86 (166)
T 3jzv_A 10 RPFRPFQSQYRWPGVDLLAYKEEGSAPFRSVTRQVLFSG--NG-LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHA 86 (166)
T ss_dssp CCCCCCCCCCCCTTSCEEECCCC-CCSCEEEEEEEEECC--TT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEE
T ss_pred ceeecccCCcCcccChhhhcccCCCcccCCeEEEEEECC--CC-CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEE
Confidence 333343445566777654443 223344444433 12 478999999999999999999999999999999999
Q ss_pred EECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 101 YLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 101 ~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
.++++. +.+.+||++++|+|++|+++|.++ +++++++++.+..
T Consensus 87 ~v~g~~----------~~l~~GD~i~ip~g~~H~~~n~~~-~~~~~l~i~~~~~ 129 (166)
T 3jzv_A 87 MVGRAV----------SAVAPYDLVTIPGWSWHQFRAPAD-EALGFLCMVNAER 129 (166)
T ss_dssp EETTEE----------EEECTTCEEEECTTCCEEEECCTT-SCEEEEEEEESSC
T ss_pred EECCEE----------EEeCCCCEEEECCCCcEEeEeCCC-CCEEEEEEEccCC
Confidence 999987 478899999999999999999998 6999999987653
No 6
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.63 E-value=5.9e-15 Score=114.80 Aligned_cols=90 Identities=26% Similarity=0.399 Sum_probs=79.7
Q ss_pred CCceeEEEEEEEECCCCcC-CceecCC-cEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCC--CcEEEEe
Q 029565 62 HGMKEIEVWLQTFSPGTRT-PIHRHSC-EEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVN--DAHQVWN 137 (191)
Q Consensus 62 ~g~~~~~~~~~~i~PG~~~-~~H~H~~-eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g--~~H~~~N 137 (191)
.+...+++.+.+++||... +.|+|.. +|++||++|++++.++++. +.+.+||++++|+| +.|+++|
T Consensus 38 ~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~----------~~l~~GD~i~ip~~~~~~H~~~n 107 (163)
T 3i7d_A 38 GGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGE----------HPMVPGDCAAFPAGDPNGHQFVN 107 (163)
T ss_dssp TTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEE----------EEECTTCEEEECTTCCCCBEEEC
T ss_pred CCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCEE----------EEeCCCCEEEECCCCCcceEEEE
Confidence 4455899999999999966 7999996 7999999999999999987 57889999999999 9999999
Q ss_pred CCCCCcEEEEEEEeCCCceeeecCC
Q 029565 138 TNENEDLQMLVVISRPPVKVFIYED 162 (191)
Q Consensus 138 ~g~~e~~~~l~v~~~p~~~~~~~~~ 162 (191)
.++ ++++++++..++..+...|.|
T Consensus 108 ~~~-~~~~~l~v~~p~~~d~~~ypd 131 (163)
T 3i7d_A 108 RTD-APATFLVVGTRTPTETAYYSD 131 (163)
T ss_dssp CSS-SCEEEEEEEECCSCEEEEETT
T ss_pred CCC-CCEEEEEEECCCCCCcccCCC
Confidence 999 699999999888777666654
No 7
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.63 E-value=5.9e-15 Score=104.01 Aligned_cols=78 Identities=19% Similarity=0.342 Sum_probs=70.6
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+.+...+++||...+.|+|+ .+|++||++|++++.++++. +.+.+||++++|+|.+|+++|.++ +++
T Consensus 27 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~~----------~~l~~Gd~~~ip~~~~H~~~~~~~-~~~ 95 (105)
T 1v70_A 27 RMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEEE----------ALLAPGMAAFAPAGAPHGVRNESA-SPA 95 (105)
T ss_dssp TEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTEE----------EEECTTCEEEECTTSCEEEECCSS-SCE
T ss_pred ceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCEE----------EEeCCCCEEEECCCCcEEeEeCCC-CCE
Confidence 578889999999999999999 47899999999999999987 578899999999999999999998 599
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
+++++..+++
T Consensus 96 ~~~~v~~p~~ 105 (105)
T 1v70_A 96 LLLVVTAPRP 105 (105)
T ss_dssp EEEEEEESCC
T ss_pred EEEEEeCCCC
Confidence 9999987653
No 8
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=5.4e-15 Score=108.88 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=80.4
Q ss_pred CeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE-CCeeeecC
Q 029565 33 PLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL-ASSSHEKH 110 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i-~~~~~~l~ 110 (191)
..+.++.+...... .+.....+.. + ..+.+.+.+++||...++|+|+ .+|++||++|++++.+ +++.
T Consensus 12 ~~v~~~~~~~~~~~--~~~~~~~~~~----~-~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~~---- 80 (125)
T 3h8u_A 12 SRIFSVDEYVRPSN--GEPIRSVVLE----T-NDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIV---- 80 (125)
T ss_dssp CCEEEHHHHCCCCS--SSCCCEEEEE----C-SSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCE----
T ss_pred cceEEhhHhhccCC--CCcEEEEEEc----C-CCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCeE----
Confidence 36777776655322 2222222222 1 2467888999999999999999 5899999999999999 7776
Q ss_pred CCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCc
Q 029565 111 PGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPV 155 (191)
Q Consensus 111 ~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~ 155 (191)
+.+.+||++++|+|.+|+++|.++ +++++++++.++..
T Consensus 81 ------~~l~~Gd~~~i~~~~~H~~~n~~~-~~~~~l~v~~p~~~ 118 (125)
T 3h8u_A 81 ------THLKAGDIAIAKPGQVHGAMNSGP-EPFIFVSVVAPGNA 118 (125)
T ss_dssp ------EEEETTEEEEECTTCCCEEEECSS-SCEEEEEEEESTTC
T ss_pred ------EEeCCCCEEEECCCCEEEeEeCCC-CCEEEEEEECCCcc
Confidence 578899999999999999999999 69999999876543
No 9
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.62 E-value=1.2e-14 Score=113.52 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=80.0
Q ss_pred CCcEEEEEEeecc-CCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEE
Q 029565 49 EGLAHITVAGSIL-HGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHI 127 (191)
Q Consensus 49 ~G~~~~~~~~~~~-~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~i 127 (191)
.|.....+..... .+...+.+...+++||...++|+|+.+|++||++|++++.++++. +.+.+||++++
T Consensus 37 ~g~~~~~L~~~~~g~~~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~~~~----------~~l~~Gd~i~i 106 (167)
T 3ibm_A 37 SGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDRV----------EPLTPLDCVYI 106 (167)
T ss_dssp CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTEE----------EEECTTCEEEE
T ss_pred CCcEEEEEECCCCCCCCCcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEECCEE----------EEECCCCEEEE
Confidence 4555555544322 123589999999999999999999999999999999999999987 47889999999
Q ss_pred CCCCcEEEEeCC-CCCcEEEEEEEeCCC
Q 029565 128 PVNDAHQVWNTN-ENEDLQMLVVISRPP 154 (191)
Q Consensus 128 p~g~~H~~~N~g-~~e~~~~l~v~~~p~ 154 (191)
|+|++|+++|.+ + +++++++++.++.
T Consensus 107 p~~~~H~~~n~~~~-~~~~~l~i~~~~~ 133 (167)
T 3ibm_A 107 APHAWHQIHATGAN-EPLGFLCIVDSDR 133 (167)
T ss_dssp CTTCCEEEEEESSS-CCEEEEEEEESSC
T ss_pred CCCCcEEEEeCCCC-CCEEEEEEEeCCc
Confidence 999999999999 8 6999999987653
No 10
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.61 E-value=9.2e-15 Score=109.67 Aligned_cols=113 Identities=21% Similarity=0.267 Sum_probs=81.9
Q ss_pred cccCCCeeEecCCCCCCccC----CCCcEEEE-EEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEE
Q 029565 28 SIKGFPLVRNISELPQDNYG----REGLAHIT-VAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLY 101 (191)
Q Consensus 28 ~~~~~~~V~~i~d~~~~~~~----~~G~~~~~-~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~ 101 (191)
+++....|.+.++.+..... ..|..... +..+...+...+++...+++||...++|+|+ .+|++||++|++++.
T Consensus 13 ~~~~~~~v~r~~~~~~~~~~~~~~~~g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~ 92 (133)
T 1o4t_A 13 MKEGTGMVVRSSEITPERISNMRGGKGEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFH 92 (133)
T ss_dssp ------CEEEGGGSCCEEEESGGGCSSEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEE
T ss_pred cccceEEEEEhhhCCEEEecCccCCCCeEEEEEccChhhCCCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEE
Confidence 45555666666666554321 22322222 3332222234678889999999999999998 699999999999999
Q ss_pred ECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 102 LASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 102 i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
++++. +.+.+||++++|+|.+|+++|.++ ++++++++..
T Consensus 93 i~~~~----------~~l~~Gd~i~i~~~~~H~~~n~~~-~~~~~l~v~~ 131 (133)
T 1o4t_A 93 DNGKD----------VPIKAGDVCFTDSGESHSIENTGN-TDLEFLAVII 131 (133)
T ss_dssp ETTEE----------EEEETTEEEEECTTCEEEEECCSS-SCEEEEEEEE
T ss_pred ECCEE----------EEeCCCcEEEECCCCcEEeEECCC-CCEEEEEEEE
Confidence 99987 578899999999999999999998 6999998864
No 11
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.61 E-value=1.1e-14 Score=103.33 Aligned_cols=75 Identities=20% Similarity=0.281 Sum_probs=68.0
Q ss_pred eEEEEEEEECCCCcCCceecCCc-EEEEEEeCEEEEEECC--eeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCE-EIFIVLKGSGTLYLAS--SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~e-E~~~Vl~G~~~v~i~~--~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
.+.+.+++++||+..+.|.|+.+ |++||++|++++++++ +. +.+.+||++++|+|.+|+++|.++ +
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~----------~~l~~Gd~~~~p~~~~H~~~N~g~-~ 85 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVT----------SQLTRGVSYTRPEGVEHNVINPSD-T 85 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEE----------EEECTTCCEEECTTCEEEEECCSS-S
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEE----------EEEcCCCEEEeCCCCcccCEeCCC-C
Confidence 68899999999999999999975 6999999999999998 44 578899999999999999999999 6
Q ss_pred cEEEEEEEe
Q 029565 143 DLQMLVVIS 151 (191)
Q Consensus 143 ~~~~l~v~~ 151 (191)
+++++++..
T Consensus 86 ~~~~l~v~~ 94 (97)
T 2fqp_A 86 EFVFVEIEI 94 (97)
T ss_dssp CEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 999998754
No 12
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.59 E-value=4.5e-14 Score=116.55 Aligned_cols=109 Identities=16% Similarity=0.087 Sum_probs=88.7
Q ss_pred cCCCeeEecCCCCCCccC-CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCc-eecCCcEEEEEEeCEEEEEECCeee
Q 029565 30 KGFPLVRNISELPQDNYG-REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPI-HRHSCEEIFIVLKGSGTLYLASSSH 107 (191)
Q Consensus 30 ~~~~~V~~i~d~~~~~~~-~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~-H~H~~eE~~~Vl~G~~~v~i~~~~~ 107 (191)
.+.+++.+.+|++..... ..|.....+. +...+ ..+.+..++++||+..+. |.|..+|.+|||+|++++.+++++
T Consensus 129 ~p~~~vg~~~dv~~~~~~~~~g~~~r~l~-p~~~~-~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~~~- 205 (246)
T 1sfn_A 129 APGVYWGNERENPGYPFEGDDHLIARKLL-PDEPA-FDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEENY- 205 (246)
T ss_dssp CCCCEEEETTTCCCEETTSCTTEEEEECS-CCCTT-CSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTEE-
T ss_pred CCceeeccHhhCCccccCCCCCeEEEEeC-CCccC-CCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEECCEE-
Confidence 566789999998876654 3443333332 32334 489999999999999986 567799999999999999999998
Q ss_pred ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 108 EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 108 ~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+.+.+||+++++++.+|+++|.++ ++++++++-.
T Consensus 206 ---------~~l~~GD~~~~~~~~pH~~~n~g~-~~~~yl~~kd 239 (246)
T 1sfn_A 206 ---------YPVTAGDIIWMGAHCPQWYGALGR-NWSKYLLYKD 239 (246)
T ss_dssp ---------EEEETTCEEEECTTCCEEEEEESS-SCEEEEEEEE
T ss_pred ---------EEcCCCCEEEECCCCCEEEEcCCC-CCEEEEEEEe
Confidence 478899999999999999999999 6999998764
No 13
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.57 E-value=4.3e-14 Score=118.39 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=90.4
Q ss_pred ccCCCeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCc-eecCCcEEEEEEeCEEEEEECCeee
Q 029565 29 IKGFPLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPI-HRHSCEEIFIVLKGSGTLYLASSSH 107 (191)
Q Consensus 29 ~~~~~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~-H~H~~eE~~~Vl~G~~~v~i~~~~~ 107 (191)
.++.++|.|++|++...+...+.....+. +... ..++.+.++++.||+.++. |.|.++|.+|||+|++.+.+++++
T Consensus 150 ~~p~~~v~~~~dv~~~~~~g~~~~~r~l~-p~~~-~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~~- 226 (266)
T 4e2q_A 150 HTTELIVGSTDKQPLLETPGEVFELRKLL-PMSV-AYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDNW- 226 (266)
T ss_dssp CCCCCEEEEGGGSCCBCCTTCCSEEEESS-CCST-TCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTEE-
T ss_pred CCCceeeCcHhHCCCcccCCCcEEEEEcc-Cccc-ccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCEE-
Confidence 56889999999999877653233333332 3333 4589999999999999996 778899999999999999999998
Q ss_pred ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 108 EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 108 ~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
+.+++||.++++++++|.+.|.|+ ++++||.--
T Consensus 227 ---------~~V~~GD~i~~~~~~~h~~~n~G~-e~~~yl~yk 259 (266)
T 4e2q_A 227 ---------YPVQAGDVIWMAPFVPQWYAALGK-TRSRYLLYK 259 (266)
T ss_dssp ---------EEEETTCEEEECTTCCEEEEEESS-SCEEEEEEE
T ss_pred ---------EEecCCCEEEECCCCcEEEEeCCC-CCEEEEEEc
Confidence 478899999999999999999999 699998754
No 14
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.57 E-value=3.5e-14 Score=104.53 Aligned_cols=88 Identities=22% Similarity=0.369 Sum_probs=74.9
Q ss_pred CCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEEC
Q 029565 49 EGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIP 128 (191)
Q Consensus 49 ~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip 128 (191)
+|.....+. + ..+.+.+.+++||...+.|+|+.+|++||++|++++.++++. +.+.+||++++|
T Consensus 29 ~G~~~~~~~-----~-~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~----------~~l~~Gd~~~ip 92 (126)
T 4e2g_A 29 PGFAMQAIQ-----G-KNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEET----------RVLRPGMAYTIP 92 (126)
T ss_dssp TTEEEEEEE-----C-SSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETTEE----------EEECTTEEEEEC
T ss_pred CCeEEEEEe-----C-CCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECCEE----------EEeCCCCEEEEC
Confidence 466555542 2 257889999999999999999999999999999999999987 478899999999
Q ss_pred CCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 129 VNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 129 ~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
+|.+|+++|.++ ++++++++.++.
T Consensus 93 ~~~~H~~~~~~~--~~~~l~v~~p~~ 116 (126)
T 4e2g_A 93 GGVRHRARTFED--GCLVLDIFSPPR 116 (126)
T ss_dssp TTCCEEEECCTT--CEEEEEEEESCC
T ss_pred CCCcEEeEECCC--CEEEEEEECCCC
Confidence 999999999875 688888887543
No 15
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.57 E-value=8.6e-14 Score=100.84 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=80.9
Q ss_pred eeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCC
Q 029565 34 LVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGK 113 (191)
Q Consensus 34 ~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk 113 (191)
.+.+.++.+.... .+|.....+... . .+.+...+++||...+.|+|+..|++||++|++++.++++.
T Consensus 7 ~~~~~~~~~~~~~-~~g~~~~~l~~~----~-~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~------- 73 (116)
T 2pfw_A 7 HFSFGEQTEIEDI-GGGLKRQMLGFN----H-ELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGVI------- 73 (116)
T ss_dssp SEECTTTSCCEEC-STTEEEEEEEEE----T-TEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETTEE-------
T ss_pred eEecccCceeeeC-CCCeEEEEEecC----C-ceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEECCEE-------
Confidence 4456666665433 356555554432 2 47889999999999899999999999999999999999987
Q ss_pred CceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 114 PQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 114 ~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
+.+.+||++++|+|.+|+++|.+ ++++++++.++.
T Consensus 74 ---~~l~~Gd~~~ip~~~~H~~~~~~---~~~~l~v~~p~~ 108 (116)
T 2pfw_A 74 ---KVLTAGDSFFVPPHVDHGAVCPT---GGILIDTFSPAR 108 (116)
T ss_dssp ---EEECTTCEEEECTTCCEEEEESS---CEEEEEEEESCC
T ss_pred ---EEeCCCCEEEECcCCceeeEeCC---CcEEEEEECCch
Confidence 47889999999999999999976 468888876553
No 16
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.56 E-value=4e-14 Score=105.01 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=71.4
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
..+++...+++||...++|+|+..|++||++|++++.++++. +.+.+||++++|+|++|+++|.++ +++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~----------~~l~~Gd~i~ip~g~~H~~~~~~~-~~~ 114 (126)
T 1vj2_A 46 PNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQGE----------ETVEEGFYIFVEPNEIHGFRNDTD-SEV 114 (126)
T ss_dssp SSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSCE----------EEEETTEEEEECTTCCEEEECCSS-SCE
T ss_pred CCEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEECCEE----------EEECCCCEEEECCCCcEEeEeCCC-CCE
Confidence 478999999999999999999999999999999999999986 578899999999999999999998 589
Q ss_pred EEEEEEeCC
Q 029565 145 QMLVVISRP 153 (191)
Q Consensus 145 ~~l~v~~~p 153 (191)
++++++.++
T Consensus 115 ~~l~v~~~~ 123 (126)
T 1vj2_A 115 EFLCLIPKE 123 (126)
T ss_dssp EEEEEEEGG
T ss_pred EEEEEEccC
Confidence 999987654
No 17
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.55 E-value=5e-14 Score=100.92 Aligned_cols=78 Identities=22% Similarity=0.371 Sum_probs=70.7
Q ss_pred eEEEEEEEECCCCcCCce--ecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 66 EIEVWLQTFSPGTRTPIH--RHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H--~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
.+++...+++||...+.| +|+ ..|++||++|++++.++++. +.+.+||++++|+|.+|+++|.++ +
T Consensus 20 ~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~~----------~~l~~Gd~~~i~~~~~H~~~~~~~-~ 88 (113)
T 2gu9_A 20 QVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHT----------QALQAGSLIAIERGQAHEIRNTGD-T 88 (113)
T ss_dssp TEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTEE----------EEECTTEEEEECTTCCEEEECCSS-S
T ss_pred cEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCEE----------EEeCCCCEEEECCCCcEEeEcCCC-C
Confidence 678899999999998888 999 89999999999999999987 478899999999999999999998 5
Q ss_pred cEEEEEEEeCCC
Q 029565 143 DLQMLVVISRPP 154 (191)
Q Consensus 143 ~~~~l~v~~~p~ 154 (191)
+++++++..++.
T Consensus 89 ~~~~~~v~~~~~ 100 (113)
T 2gu9_A 89 PLKTVNFYHPPA 100 (113)
T ss_dssp CEEEEEEEESCC
T ss_pred CEEEEEEECCCC
Confidence 899999987654
No 18
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.55 E-value=1.9e-14 Score=113.40 Aligned_cols=76 Identities=18% Similarity=0.275 Sum_probs=69.4
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC-CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA-SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~-~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
.+..+.+++++||+..+.|.|..+|++|||+|+++++++ ++. +.+++||++ +|++.+|+++|.++ ++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~ge~----------~~L~~GDsi-~~~g~~H~~~N~g~-~~ 144 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAK----------RTVRQGGII-VQRGTNHLWRNTTD-KP 144 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGGCE----------EEECTTCEE-EECSCCBEEECCSS-SC
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCCeE----------EEECCCCEE-EeCCCcEEEEeCCC-CC
Confidence 467889999999999999999999999999999999998 665 478899999 99999999999999 69
Q ss_pred EEEEEEEeC
Q 029565 144 LQMLVVISR 152 (191)
Q Consensus 144 ~~~l~v~~~ 152 (191)
+++++++.+
T Consensus 145 ar~l~V~~P 153 (172)
T 3es1_A 145 CRIAFILIE 153 (172)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEcC
Confidence 999999864
No 19
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.54 E-value=6.3e-14 Score=102.60 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=65.9
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
.+++.+.+++||...+.|+|+.+|++||++|++++.++++. +.+.+||++++|+|++|+++|.++ ++
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~----------~~l~~Gd~i~ip~~~~H~~~~~~~---~~ 101 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGAQ----------RRLHQGDLLYLGAGAAHDVNAITN---TS 101 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTEE----------EEECTTEEEEECTTCCEEEEESSS---EE
T ss_pred CEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEECCEE----------EEECCCCEEEECCCCcEEEEeCCC---cE
Confidence 67899999999999999999999999999999999999987 478899999999999999999865 45
Q ss_pred EEEEEeCCC
Q 029565 146 MLVVISRPP 154 (191)
Q Consensus 146 ~l~v~~~p~ 154 (191)
++.++..+.
T Consensus 102 ~~~~~v~p~ 110 (114)
T 3fjs_A 102 LLVTVVLVD 110 (114)
T ss_dssp EEEEEECC-
T ss_pred EEEEEEeCC
Confidence 555554443
No 20
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.54 E-value=7e-14 Score=106.78 Aligned_cols=95 Identities=22% Similarity=0.308 Sum_probs=79.8
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
..+.+...+++||...++|+|+..|++||++|++++.++++. .+.+.+||++++|+|++|+++|.++ +++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~---------~~~l~~Gd~i~ip~~~~H~~~n~~~-~~~ 115 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGKP---------ARILKKGDVVEIPPNVVHWHGAAPD-EEL 115 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTSC---------CEEEETTCEEEECTTCCEEEEEBTT-BCE
T ss_pred CcEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEECCEE---------EEEECCCCEEEECCCCcEEeEeCCC-CCE
Confidence 478999999999999999999999999999999999999874 0377899999999999999999998 589
Q ss_pred EEEEEEeCCCceeeecCCCCCccccccc
Q 029565 145 QMLVVISRPPVKVFIYEDWSMPHTAAKL 172 (191)
Q Consensus 145 ~~l~v~~~p~~~~~~~~~w~~~~~~~~~ 172 (191)
+++++..++.. ...+|++..++..|
T Consensus 116 ~~l~v~~~~~~---~~~~wl~~v~~e~~ 140 (147)
T 2f4p_A 116 VHIGISTQVHL---GPAEWLGSVTEEEY 140 (147)
T ss_dssp EEEEEECCGGG---CCCEECCCCCHHHH
T ss_pred EEEEEEccCCC---CCceecccCCHHHh
Confidence 99998865432 23578876655444
No 21
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.53 E-value=6.1e-14 Score=102.17 Aligned_cols=78 Identities=22% Similarity=0.314 Sum_probs=69.8
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCcee-eecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEH-FFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~-~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+.+...+++||...+.|+|+..|++||++|++++.++++. + .+.+||++++|+|.+|+++|.++ +++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~----------~~~l~~Gd~i~ip~~~~H~~~~~~~-~~~ 94 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQE----------PHNYKEGNIVYVPFNVKMLIQNINS-DIL 94 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEETTSC----------CEEEETTCEEEECTTCEEEEECCSS-SEE
T ss_pred ceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECCEE----------EEEeCCCCEEEECCCCcEEeEcCCC-CCE
Confidence 57788899999999999999999999999999999999976 4 77899999999999999999998 589
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
+++++..+++
T Consensus 95 ~~l~i~~~~~ 104 (117)
T 2b8m_A 95 EFFVVKAPHP 104 (117)
T ss_dssp EEEEEECSCG
T ss_pred EEEEEECCCC
Confidence 9998865443
No 22
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.53 E-value=1.4e-13 Score=108.88 Aligned_cols=75 Identities=9% Similarity=0.135 Sum_probs=68.1
Q ss_pred eeEEEEEEEECCCCcCC---ceecCCcEEEEEEeCEEEEEECC----eeeecCCCCCceeeecCCeEEEECCCCcEEEEe
Q 029565 65 KEIEVWLQTFSPGTRTP---IHRHSCEEIFIVLKGSGTLYLAS----SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWN 137 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~---~H~H~~eE~~~Vl~G~~~v~i~~----~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N 137 (191)
..+++..++++||...+ .|+|+.+|++||++|++++.+++ +. +.+.+||++++|++.+|.++|
T Consensus 115 ~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~----------~~l~~GD~~~~~~~~~H~~~n 184 (198)
T 2bnm_A 115 PSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKE----------ALLPTGASMFVEEHVPHAFTA 184 (198)
T ss_dssp TTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEE----------EEECTTCEEEECTTCCEEEEE
T ss_pred CcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCccc----------EEECCCCEEEeCCCCceEEEe
Confidence 37899999999999876 69999999999999999999999 76 578899999999999999999
Q ss_pred C-CCCCcEEEEEEE
Q 029565 138 T-NENEDLQMLVVI 150 (191)
Q Consensus 138 ~-g~~e~~~~l~v~ 150 (191)
. ++ ++++++++.
T Consensus 185 ~~~~-~~~~~l~v~ 197 (198)
T 2bnm_A 185 AKGT-GSAKLIAVN 197 (198)
T ss_dssp STTS-CCEEEEEEE
T ss_pred cCCC-CCeEEEEEe
Confidence 9 88 699999885
No 23
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.52 E-value=3e-13 Score=113.13 Aligned_cols=110 Identities=12% Similarity=0.180 Sum_probs=87.5
Q ss_pred cCCCeeEecCCCCCCccC-CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCc-eecCCcEEEEEEeCEEEEEECCeee
Q 029565 30 KGFPLVRNISELPQDNYG-REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPI-HRHSCEEIFIVLKGSGTLYLASSSH 107 (191)
Q Consensus 30 ~~~~~V~~i~d~~~~~~~-~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~-H~H~~eE~~~Vl~G~~~v~i~~~~~ 107 (191)
.+..++.+.++++..... ..|.....+.. ...+ ..+++..++++||+..+. |+|..+|++||++|++++.++++.
T Consensus 146 ~p~~~v~~~~d~~~~~~~~~~g~~~~~l~~-~~~~-~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~~- 222 (274)
T 1sef_A 146 QPYKVVGSIHDQQPEEYEGMTDVLLWSLLP-KEFD-FDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEW- 222 (274)
T ss_dssp CCCCEEEEGGGSCCEEGGGCTTEEEEECSC-SSTT-CSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEE-
T ss_pred CCcceeCChHHCCccccCCCCCeEEEEeCC-cccC-CCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCEE-
Confidence 456788899888875542 34543333322 2334 378999999999999988 999999999999999999999987
Q ss_pred ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 108 EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 108 ~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+.+++||++++|++++|.++|.+++++++++++..
T Consensus 223 ---------~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~~ 257 (274)
T 1sef_A 223 ---------YPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKD 257 (274)
T ss_dssp ---------EEEETTCEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ---------EEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEEc
Confidence 57889999999999999999998723888888743
No 24
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.52 E-value=2.5e-13 Score=98.24 Aligned_cols=87 Identities=15% Similarity=0.327 Sum_probs=72.1
Q ss_pred CCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEEC
Q 029565 49 EGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIP 128 (191)
Q Consensus 49 ~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip 128 (191)
+|.....+... ..+.+...+++||...+.|+|+..|++||++|++++.++++. +.+.+||++++|
T Consensus 27 ~~~~~~~l~~~-----~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~~~----------~~l~~Gd~~~ip 91 (115)
T 1yhf_A 27 DQMLSRTLVQR-----QDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQET----------YRVAEGQTIVMP 91 (115)
T ss_dssp TCEEEEEEEEE-----TTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTEE----------EEEETTCEEEEC
T ss_pred CCeEEEEEEeC-----CceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEECCEE----------EEECCCCEEEEC
Confidence 46555544432 257888999999999999999999999999999999999987 478899999999
Q ss_pred CCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 129 VNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 129 ~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
+|.+|+++|.+ ++++++++..+
T Consensus 92 ~~~~H~~~~~~---~~~~~~v~~~~ 113 (115)
T 1yhf_A 92 AGIPHALYAVE---AFQMLLVVVKP 113 (115)
T ss_dssp TTSCEEEEESS---CEEEEEEEECS
T ss_pred CCCCEEEEECC---CceEEEEEEcc
Confidence 99999999976 36777776544
No 25
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.52 E-value=1.1e-14 Score=104.40 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=66.9
Q ss_pred eEEEEEEEECCCCcCCceecCC-cEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
++.+.+++++||+.+++|.|+. .|+++|++|+++++.++... +++.+.+||++++|+|.+|++.|.|+ +++
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~-------~~~~l~~G~~~~ip~G~~H~~~N~g~-~pl 87 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTR-------SLAQLKTGRSYARKAGVQHDVRNEST-AEI 87 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCE-------ECCCBCTTCCEEECTTCEEEEBCCSS-SCE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCce-------EEEEecCCcEEEEcCCCcEECEECCC-CeE
Confidence 7899999999999999999994 67888999999999887431 12467899999999999999999999 699
Q ss_pred EEEEEEe
Q 029565 145 QMLVVIS 151 (191)
Q Consensus 145 ~~l~v~~ 151 (191)
.++.|..
T Consensus 88 ~~IeVE~ 94 (98)
T 3lag_A 88 VFLEIEL 94 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999853
No 26
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.52 E-value=1.5e-13 Score=114.11 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=80.3
Q ss_pred cCCCeeEecCCCCCCccCCCCc-EEEEEEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeee
Q 029565 30 KGFPLVRNISELPQDNYGREGL-AHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSH 107 (191)
Q Consensus 30 ~~~~~V~~i~d~~~~~~~~~G~-~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~ 107 (191)
.+..++.+.++++....+..|. ....+... ..+ ..+++.+++++||+..+.|+|+ .+|++||++|++++.++++.
T Consensus 143 ~p~~~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~- 219 (261)
T 1rc6_A 143 APWLVSGNASELERIHYEGMDDVILLDFLPK-ELG-FDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNW- 219 (261)
T ss_dssp CCCCEEEEGGGSCCC-------CEEEECSCC-STT-CSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSCE-
T ss_pred CCceEEcCHHHCCcccCCCCcceEEEEecCc-ccC-CceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCEE-
Confidence 4556788888887654432222 22222222 223 3788999999999999999997 78999999999999999987
Q ss_pred ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 108 EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 108 ~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+.+.+||++++|++.+|+++|.+++++++++++..
T Consensus 220 ---------~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~d 254 (261)
T 1rc6_A 220 ---------IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKD 254 (261)
T ss_dssp ---------EEEETTCEEEECSSEEEEEEEC----CEEEEEEEE
T ss_pred ---------EEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEec
Confidence 57889999999999999999998723899888654
No 27
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.51 E-value=2e-13 Score=107.76 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=75.2
Q ss_pred CCcEEEEEEeeccCCceeEEEEEEEECCCCcCC--ceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEE
Q 029565 49 EGLAHITVAGSILHGMKEIEVWLQTFSPGTRTP--IHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFH 126 (191)
Q Consensus 49 ~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~--~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ 126 (191)
.|.....+... ..+ ..+++...+++||...+ .|+|..+|++||++|++++.++++. +.+.+||+++
T Consensus 88 ~g~~~~~l~~~-~~~-~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~~----------~~l~~GD~i~ 155 (192)
T 1y9q_A 88 LNMKIHTLFPY-AAD-TGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQW----------HELQQGEHIR 155 (192)
T ss_dssp TTEEEEEEEEE-ETT-TTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTEE----------EEECTTCEEE
T ss_pred CCEEEEEeccC-CCC-CcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECCEE----------EEeCCCCEEE
Confidence 44444444332 233 37899999999998765 6777789999999999999999987 5788999999
Q ss_pred ECCCCcEEEEeCCCCCcEEEEEEEeCCCce
Q 029565 127 IPVNDAHQVWNTNENEDLQMLVVISRPPVK 156 (191)
Q Consensus 127 ip~g~~H~~~N~g~~e~~~~l~v~~~p~~~ 156 (191)
+|++++|.++|.++ +++ ++++..++..+
T Consensus 156 i~~~~~H~~~n~~~-~~~-~l~v~~~~~~~ 183 (192)
T 1y9q_A 156 FFSDQPHGYAAVTE-KAV-FQNIVAYPRRE 183 (192)
T ss_dssp EECSSSEEEEESSS-CEE-EEEEEECCC--
T ss_pred EcCCCCeEeECCCC-CcE-EEEEEecCccc
Confidence 99999999999998 689 99888777654
No 28
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.51 E-value=6.5e-14 Score=124.99 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=67.0
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC--CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCC-CCC
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA--SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTN-ENE 142 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~--~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g-~~e 142 (191)
.+.+.+++++||+..++|+|..+|++||++|++++.+. +... .+.+++||++++|+|..|++.|.+ + +
T Consensus 85 ~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~--------~~~l~~GDv~~~P~G~~H~~~N~g~~-~ 155 (445)
T 2cav_A 85 DYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRD--------TYKLDQGDAIKIQAGTPFYLINPDNN-Q 155 (445)
T ss_dssp TEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEE--------EEEEETTEEEEECTTCCEEEEECCSS-C
T ss_pred cEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCE--------EEEecCCCEEEECCCCcEEEEECCCC-C
Confidence 48999999999999999955599999999999999762 3211 258999999999999999999998 6 6
Q ss_pred cEEEEEEEeC
Q 029565 143 DLQMLVVISR 152 (191)
Q Consensus 143 ~~~~l~v~~~ 152 (191)
+++++++..+
T Consensus 156 ~l~~l~v~~~ 165 (445)
T 2cav_A 156 NLRILKFAIT 165 (445)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEecc
Confidence 9999998864
No 29
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.1e-13 Score=108.40 Aligned_cols=77 Identities=14% Similarity=0.207 Sum_probs=67.5
Q ss_pred eEEEEEEEECC-CCcCCc-eecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 66 EIEVWLQTFSP-GTRTPI-HRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 66 ~~~~~~~~i~P-G~~~~~-H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
.++..+++++| |+..+. +.|..+|++||++|+++++++++. +.+.+||++++|++.+|+++|.++ ++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~~----------~~L~~Gds~~iP~g~~H~~~N~~d-~~ 155 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNK----------FLSVKGSTFQIPAFNEYAIANRGN-DE 155 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEE----------EEEETTCEEEECTTCEEEEEECSS-SC
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCEE----------EEEcCCCEEEECCCCCEEEEECCC-CC
Confidence 67888999999 766555 556699999999999999999997 578899999999999999999999 69
Q ss_pred EEEEEEEeCC
Q 029565 144 LQMLVVISRP 153 (191)
Q Consensus 144 ~~~l~v~~~p 153 (191)
++++++....
T Consensus 156 Arll~Vq~~~ 165 (166)
T 2vpv_A 156 AKMFFVQVTV 165 (166)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEC
Confidence 9999997643
No 30
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.50 E-value=1.6e-13 Score=104.46 Aligned_cols=84 Identities=19% Similarity=0.328 Sum_probs=70.5
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+.+..++++||...+.|+|+ .+|++||++|++++.++++...+ ..++.+.+||++++|+|.+|+++|.++ +++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~----~~~~~l~~Gd~i~ip~g~~H~~~n~~~-~~~ 116 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNL----HFQEEVFDDYAILIPAGTWHNVRNTGN-RPL 116 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBC----CEEEEEETTCEEEECTTCEEEEEECSS-SCE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccc----eeeEEECCCCEEEECCCCcEEEEECCC-CCE
Confidence 578888999999999999999 56999999999999999875100 001478899999999999999999998 699
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
++++++.++.
T Consensus 117 ~~l~i~~~~~ 126 (148)
T 2oa2_A 117 KLYSIYAPPQ 126 (148)
T ss_dssp EEEEEEESCC
T ss_pred EEEEEECCCC
Confidence 9999886554
No 31
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.49 E-value=6.3e-13 Score=94.95 Aligned_cols=101 Identities=21% Similarity=0.331 Sum_probs=76.7
Q ss_pred CeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCC-cEE-EEEEeCEEEEEEC-Ceeeec
Q 029565 33 PLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSC-EEI-FIVLKGSGTLYLA-SSSHEK 109 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~-eE~-~~Vl~G~~~v~i~-~~~~~l 109 (191)
..+.++++..... .++.....+.. + ..+.+...+++||...+.|+|+. .|+ +||++|++++.++ ++.
T Consensus 6 m~~~~~~~~~~~~--~~~~~~~~l~~----~-~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~~--- 75 (110)
T 2q30_A 6 MKSHNLLEAVRFD--DQRFVMELVHE----S-ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDAV--- 75 (110)
T ss_dssp CEEEETTSSCCCC--SSSCEEEEEEE----C-SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGCE---
T ss_pred ceEeehhHeeeec--CCCEEEEEEec----C-CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCEE---
Confidence 4466776665533 23444433322 2 25788889999999999999995 687 8999999999998 565
Q ss_pred CCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 110 HPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 110 ~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
+.+.+||++++|+|.+|+++|.++ ++++.+++++
T Consensus 76 -------~~l~~Gd~~~ip~~~~H~~~~~~~---~~~l~~~~p~ 109 (110)
T 2q30_A 76 -------IPAPRGAVLVAPISTPHGVRAVTD---MKVLVTIAPP 109 (110)
T ss_dssp -------EEECTTEEEEEETTSCEEEEESSS---EEEEEEEESC
T ss_pred -------EEECCCCEEEeCCCCcEEEEEcCC---cEEEEEECCC
Confidence 578899999999999999999764 5677777654
No 32
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.49 E-value=1.4e-13 Score=113.26 Aligned_cols=79 Identities=18% Similarity=0.293 Sum_probs=71.7
Q ss_pred eEEEEEEEECC-CCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSP-GTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~P-G~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+++.+.+++| |...+.|+|+.+|++||++|++++.++++. +.+.+||++++|+|++|+++|.++ +++
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~----------~~l~~Gd~i~ip~~~~H~~~n~~~-~~~ 212 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCT----------VEMKFGTAYFCEPREDHGAINRSE-KES 212 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCSSEEEEEECSSCEEEEETTEE----------EEECTTCEEEECTTCCEEEEECSS-SCE
T ss_pred eeEEEEEEECCCCCcCCCEeCCCcEEEEEEECEEEEEECCEE----------EEECCCCEEEECCCCcEEeEeCCC-CCE
Confidence 46788889999 888899999999999999999999999987 478899999999999999999999 699
Q ss_pred EEEEEEeCCCc
Q 029565 145 QMLVVISRPPV 155 (191)
Q Consensus 145 ~~l~v~~~p~~ 155 (191)
++++++.++..
T Consensus 213 ~~l~v~~p~~~ 223 (243)
T 3h7j_A 213 KSINIFFPPRY 223 (243)
T ss_dssp EEEEEEESCSS
T ss_pred EEEEEEcCChh
Confidence 99999986554
No 33
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.48 E-value=3.7e-13 Score=99.16 Aligned_cols=80 Identities=19% Similarity=0.337 Sum_probs=69.3
Q ss_pred eeEEEEEEEECCCCcCC-ceecCCcE-EEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 65 KEIEVWLQTFSPGTRTP-IHRHSCEE-IFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~-~H~H~~eE-~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
..+.+...+++||...+ +|+|+..| ++||++|++++.++++. +.+.+||++++|+|.+|+++|.++ +
T Consensus 24 ~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~~----------~~l~~Gd~i~i~~~~~H~~~~~~~-~ 92 (125)
T 3cew_A 24 TGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGEK----------IELQAGDWLRIAPDGKRQISAASD-S 92 (125)
T ss_dssp SSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTEE----------EEEETTEEEEECTTCCEEEEEBTT-B
T ss_pred CCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCEE----------EEeCCCCEEEECCCCcEEEEcCCC-C
Confidence 36788889999999988 89999655 56699999999999987 578899999999999999999988 5
Q ss_pred cEEEEEEEeCCCc
Q 029565 143 DLQMLVVISRPPV 155 (191)
Q Consensus 143 ~~~~l~v~~~p~~ 155 (191)
+++++++..++..
T Consensus 93 ~~~~~~i~~~~~~ 105 (125)
T 3cew_A 93 PIGFLCIQVKAGS 105 (125)
T ss_dssp CEEEEEEEEETTC
T ss_pred CEEEEEEEcCCcc
Confidence 8999988765554
No 34
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.48 E-value=1e-12 Score=104.59 Aligned_cols=118 Identities=20% Similarity=0.267 Sum_probs=84.9
Q ss_pred cCC-CeeEecCCCCCCccCC---------CCcEEEEE--EeeccCCceeEEEEEEEECCCCc------CCceecCC---c
Q 029565 30 KGF-PLVRNISELPQDNYGR---------EGLAHITV--AGSILHGMKEIEVWLQTFSPGTR------TPIHRHSC---E 88 (191)
Q Consensus 30 ~~~-~~V~~i~d~~~~~~~~---------~G~~~~~~--~~~~~~g~~~~~~~~~~i~PG~~------~~~H~H~~---e 88 (191)
.+. +.+++++|+...-... .+.....+ ......+ ..+.+...+++||.. .+.|+|+. +
T Consensus 19 ~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~ 97 (190)
T 1x82_A 19 EGAKKSVRRLSDMEGYFVDERAWKELVEKEDPVVYEVYAVEQEEKE-GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRA 97 (190)
T ss_dssp TTCCEEEEEGGGGTTCSSCHHHHHHHHHHTCCEEEEEEEECCCSCT-TCEEEEEEEECCCEETTEECBCCCBBCSSTTCC
T ss_pred CCcccceecHHHHHHHHhChhhhhhhhcCCCceEEEEEEecCCCCC-CCeEEEEEEECCCcCCCcccCCCCeECCCCCCC
Confidence 444 7889988876532211 12222222 1111222 368888899999988 77899973 7
Q ss_pred EEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 89 EIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 89 E~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
|++||++|++.+.++++. |+...+.+.+||++++|+|.+|+++|.++ ++++++++..++.
T Consensus 98 E~~~Vl~G~~~~~i~~~~-----g~~~~~~l~~GD~v~ip~g~~H~~~N~g~-~~~~~l~v~~~~~ 157 (190)
T 1x82_A 98 EVYVALKGKGGMLLQTPE-----GDAKWISMEPGTVVYVPPYWAHRTVNIGD-EPFIFLAIYPADA 157 (190)
T ss_dssp EEEEEEESCEEEEEECTT-----CCEEEEEECTTCEEEECTTCEEEEEECSS-SCEEEEEEEETTC
T ss_pred EEEEEEcCEEEEEEcCcC-----CcEEEEEECCCcEEEECCCCeEEEEECCc-ccEEEEEEECCCc
Confidence 999999999999998764 21112578999999999999999999998 6999999987654
No 35
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.47 E-value=2.4e-13 Score=118.30 Aligned_cols=119 Identities=19% Similarity=0.222 Sum_probs=88.2
Q ss_pred CeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCC-cEEEEEEeCEEEEEEC-----Cee
Q 029565 33 PLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYLA-----SSS 106 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i~-----~~~ 106 (191)
+++.+..+.+.. ...+.....+........+.+++.+++++||+..++|+|+. +|++||++|+++++++ ++.
T Consensus 225 ~~v~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~ 302 (385)
T 1j58_A 225 PFTYRLLEQEPI--ESEGGKVYIADSTNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHART 302 (385)
T ss_dssp CSEEEGGGSCCE--ECSSEEEEEESTTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEE
T ss_pred CeeeecccCCCe--eCCCceEEEeecccCCcccceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEE
Confidence 456666555442 22233333322222222346899999999999999999997 9999999999999987 444
Q ss_pred eecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCceeeecCCCC
Q 029565 107 HEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPVKVFIYEDWS 164 (191)
Q Consensus 107 ~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~~~~~~~~w~ 164 (191)
+.+.+||++++|++.+|+++|.++ ++++++++..++........+|+
T Consensus 303 ----------~~l~~GD~~~ip~~~~H~~~n~~~-~~~~~l~v~~~~~~~d~~~~~~l 349 (385)
T 1j58_A 303 ----------FNYQAGDVGYVPFAMGHYVENIGD-EPLVFLEIFKDDHYADVSLNQWL 349 (385)
T ss_dssp ----------EEEESSCEEEECTTCBEEEEECSS-SCEEEEEEESSSSCCCEEHHHHH
T ss_pred ----------EEEcCCCEEEECCCCeEEEEECCC-CCEEEEEEECCCCccccCHHHHH
Confidence 688999999999999999999998 69999999877655443445565
No 36
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.47 E-value=1.3e-13 Score=113.78 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=69.3
Q ss_pred cCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE--------CCeeeecCC--CCCceeeecCCeEEEECC
Q 029565 61 LHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL--------ASSSHEKHP--GKPQEHFFFANSTFHIPV 129 (191)
Q Consensus 61 ~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i--------~~~~~~l~~--gk~~d~~l~~GD~v~ip~ 129 (191)
..+ ..+++...+++||...++|+|+ .+|++||++|++++.+ +++...-.. |+...+.+.+||++++|+
T Consensus 38 ~~~-~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~ 116 (239)
T 2xlg_A 38 AKD-IGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPN 116 (239)
T ss_dssp ETT-EEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECT
T ss_pred CCC-CCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECC
Confidence 344 3789999999999999999999 7899999999999999 776000000 000025788999999999
Q ss_pred CCcEEEEeCCCCCcEEE-EEEE
Q 029565 130 NDAHQVWNTNENEDLQM-LVVI 150 (191)
Q Consensus 130 g~~H~~~N~g~~e~~~~-l~v~ 150 (191)
|.+|.++|.++ +++++ ++++
T Consensus 117 g~~H~~~N~~~-~~~~~~l~~~ 137 (239)
T 2xlg_A 117 HYMHGFVNPTD-KTLPIVFVWM 137 (239)
T ss_dssp TEEEEEECCSS-SCEEEEEEEE
T ss_pred CCCEEEEeCCC-CCEEEEEEEE
Confidence 99999999999 68998 6665
No 37
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.47 E-value=1.4e-12 Score=97.01 Aligned_cols=80 Identities=18% Similarity=0.239 Sum_probs=62.8
Q ss_pred EEEEEEECCCCcCCceecCC-cEEEEEEeCEEEEEECC-eeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 68 EVWLQTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYLAS-SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i~~-~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
.+.++.++||...++|+|.. +|++||++|++++.+++ +. +.+.+||++++|+|++|+++|.++ +++
T Consensus 44 ~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~~----------~~l~~Gd~~~ip~g~~H~~~~~~~--~~~ 111 (134)
T 2o8q_A 44 HVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDIGA----------VMLEAGGSAFQPPGVRHRELRHSD--DLE 111 (134)
T ss_dssp EEEEECC-----CCCEEECCSCEEEEEEESEEEEEETTTEE----------EEEETTCEEECCTTCCEEEEEECT--TCE
T ss_pred EEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECCcEE----------EEecCCCEEEECCCCcEEeEeCCC--CeE
Confidence 34444556888889999996 99999999999999999 76 578899999999999999999876 368
Q ss_pred EEEEEeCCCceeee
Q 029565 146 MLVVISRPPVKVFI 159 (191)
Q Consensus 146 ~l~v~~~p~~~~~~ 159 (191)
+++++.++.+...+
T Consensus 112 ~l~~~~p~~~~~~~ 125 (134)
T 2o8q_A 112 VLEIVSPAGFATSV 125 (134)
T ss_dssp EEEEESSTTCCEEE
T ss_pred EEEEECCCchheee
Confidence 88888777766544
No 38
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.46 E-value=5.3e-13 Score=98.35 Aligned_cols=79 Identities=22% Similarity=0.326 Sum_probs=71.1
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
..+.+...+++||...+.|+|...|++||++|++++.++++. +.+.+||++++|+|+.|++.|.++ +++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~~~~----------~~l~~Gd~~~i~~~~~H~~~~~~~-~~~ 100 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRINDED----------FPVTKGDLIIIPLDSEHHVINNNQ-EDF 100 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEETTEE----------EEEETTCEEEECTTCCEEEEECSS-SCE
T ss_pred CCcEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEECCEE----------EEECCCcEEEECCCCcEEeEeCCC-CCE
Confidence 367888999999999999999999999999999999999987 578899999999999999999988 589
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
+++++.-.+.
T Consensus 101 ~~~~i~f~~~ 110 (128)
T 4i4a_A 101 HFYTIWWDKE 110 (128)
T ss_dssp EEEEEEECHH
T ss_pred EEEEEEECHH
Confidence 9988875443
No 39
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.45 E-value=5.5e-13 Score=105.12 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=67.7
Q ss_pred CCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEEC----CeeeecCCCCCceeeecCCeEEEECCCCcEEEE
Q 029565 62 HGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLA----SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 62 ~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~----~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~ 136 (191)
.+...+++.+++++||+..++| |+ .+|++||++|++++.+. +.. +.+++||++++|+|.+|+++
T Consensus 36 ~~~~~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~~----------~~l~~GDv~~~P~g~~H~~~ 104 (178)
T 1dgw_A 36 ENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGRDT----------YKLDQGDAIKIQAGTPFYLI 104 (178)
T ss_dssp GGGTTEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETTEEEE----------EEEETTEEEEECTTCCEEEE
T ss_pred CCcCcEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCCCcEE----------EEECCCCEEEECCCCeEEEE
Confidence 4434689999999999999999 76 79999999999999885 333 58899999999999999999
Q ss_pred eCCCCCcEEEEEEEe
Q 029565 137 NTNENEDLQMLVVIS 151 (191)
Q Consensus 137 N~g~~e~~~~l~v~~ 151 (191)
|.+++++++++++..
T Consensus 105 N~g~~~~l~~l~v~~ 119 (178)
T 1dgw_A 105 NPDNNQNLRILKFAI 119 (178)
T ss_dssp ECCSSSCEEEEEEEE
T ss_pred eCCCCCCEEEEEEEC
Confidence 998733789998864
No 40
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.45 E-value=5.7e-13 Score=111.99 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=86.5
Q ss_pred cCCCeeEecCCCCCCccC-CCCc--EEEEEEeeccCCceeEEEEEEEECCCCcCCc-eecCCcEEEEEEeCEEEEEECCe
Q 029565 30 KGFPLVRNISELPQDNYG-REGL--AHITVAGSILHGMKEIEVWLQTFSPGTRTPI-HRHSCEEIFIVLKGSGTLYLASS 105 (191)
Q Consensus 30 ~~~~~V~~i~d~~~~~~~-~~G~--~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~-H~H~~eE~~~Vl~G~~~v~i~~~ 105 (191)
.+..++.+.+|++..... .+|. ....+ .+...+ .++.+.+++++||+.++. |.|..+|.+|||+|++.+.++++
T Consensus 153 ~p~~~vgn~~di~~~~~~~~~~~~~~~r~l-~p~~~~-~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~~ 230 (278)
T 1sq4_A 153 LPEAFVTNEQDIQPLVMPDTEGRWSTTRFV-DMSDMR-HDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQD 230 (278)
T ss_dssp CCCCEEEEGGGSCCEECSSGGGCEEEECSS-CTTCTT-CSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETTE
T ss_pred CCcccccchhhcCcccCCCCCCceeEEEEe-cCCCcC-CCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECCE
Confidence 456688888888765543 2233 11112 232344 489999999999999997 55668899999999999999999
Q ss_pred eeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 106 SHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 106 ~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+ +.+++||+++++++.+|+++|.|+ ++++||.+..
T Consensus 231 ~----------~~v~~GD~~~~~~~~~h~~~n~g~-~~~~yl~~~d 265 (278)
T 1sq4_A 231 W----------VEVEAGDFMWLRAFCPQACYSGGP-GRFRYLLYKD 265 (278)
T ss_dssp E----------EEEETTCEEEEEESCCEEEECCSS-SCEEEEEEEE
T ss_pred E----------EEeCCCCEEEECCCCCEEEEcCCC-CCEEEEEEEE
Confidence 8 478899999999999999999999 6999999885
No 41
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.44 E-value=9e-13 Score=111.90 Aligned_cols=111 Identities=19% Similarity=0.221 Sum_probs=85.9
Q ss_pred CCeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecC
Q 029565 32 FPLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKH 110 (191)
Q Consensus 32 ~~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~ 110 (191)
.++|.+-.+... +...|.....+..+...+ ..+.+...+++||...+.|+|. .+|++||++|+++++++++.
T Consensus 14 ~~~v~r~~~~~~--~~~~g~~~~~l~~~~~~~-~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~---- 86 (337)
T 1y3t_A 14 MPYLLRSGEGER--YLFGRQVATVMANGRSTG-DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGER---- 86 (337)
T ss_dssp CCEEECTTCSEE--EEETTEEEEEEECHHHHT-SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTEE----
T ss_pred CCEEecCCCccE--EEECCeEEEEEeecCCCC-CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCEE----
Confidence 455655444332 222454444444332233 3789999999999999999999 89999999999999999987
Q ss_pred CCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCcee
Q 029565 111 PGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPVKV 157 (191)
Q Consensus 111 ~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~~~ 157 (191)
+.+.+||++++|+|++|.++|.++ ++++++++.++.++.
T Consensus 87 ------~~l~~Gd~~~~p~~~~H~~~n~~~--~~~~~~~~~p~~~~~ 125 (337)
T 1y3t_A 87 ------YLLISGDYANIPAGTPHSYRMQSH--RTRLVSYTMKGNVAH 125 (337)
T ss_dssp ------EEECTTCEEEECTTCCEEEEECST--TEEEEEEEETTSSTH
T ss_pred ------EEECCCCEEEECCCCcEEEEECCC--CeEEEEEECCCCHHH
Confidence 478899999999999999999986 599999988776654
No 42
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.43 E-value=7.7e-13 Score=109.73 Aligned_cols=112 Identities=13% Similarity=0.060 Sum_probs=80.1
Q ss_pred CcccCCCeeEecCCCCCCccC-CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceec-C-CcEEEEEEeCEEEEEEC
Q 029565 27 CSIKGFPLVRNISELPQDNYG-REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRH-S-CEEIFIVLKGSGTLYLA 103 (191)
Q Consensus 27 ~~~~~~~~V~~i~d~~~~~~~-~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H-~-~eE~~~Vl~G~~~v~i~ 103 (191)
...+....|.+.++....... ..|.....+..+ ..+ ..+++..++++||+..+.|.| . .+|++||++|+++++++
T Consensus 20 ~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~ 97 (261)
T 1rc6_A 20 IVKHGNFALLTPDGLVKNIIPGFENCDATILSTP-KLG-ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE 97 (261)
T ss_dssp EECTTSEEEECGGGSCCBCCTTEEEEEEEECCCG-GGT-CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET
T ss_pred EEeECCEEEEChhhcEEeeccCCCCcEEEEEeCC-CCC-CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC
Confidence 345555555555555332221 112222222222 233 368889999999987765544 3 68999999999999999
Q ss_pred CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 104 SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 104 ~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
++. +.+.+||++++|++.+|+++|.++ ++++++++..
T Consensus 98 ~~~----------~~L~~Gd~~~~~~~~~H~~~N~~~-~~~~~l~v~~ 134 (261)
T 1rc6_A 98 GKT----------FALSEGGYLYCPPGSLMTFVNAQA-EDSQIFLYKR 134 (261)
T ss_dssp TEE----------EEEETTEEEEECTTCCCEEEECSS-SCEEEEEEEE
T ss_pred CEE----------EEECCCCEEEECCCCCEEEEeCCC-CCEEEEEEEe
Confidence 987 578899999999999999999998 6999999874
No 43
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.42 E-value=1.3e-12 Score=104.65 Aligned_cols=87 Identities=25% Similarity=0.303 Sum_probs=69.6
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
++.+.+++++||+..++|+|+ .+|++||++|++++.+.+..- ..++...+.+.+||++++|+|.+|+++|.++ +++
T Consensus 71 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~--~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~-~~~ 147 (201)
T 1fi2_A 71 GVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLD--SGNKLYSRVVRAGETFVIPRGLMHFQFNVGK-TEA 147 (201)
T ss_dssp SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGG--GTTCEEEEEEETTCEEEECTTCCEEEEECSS-SCE
T ss_pred ceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCC--CCCeEEEEEECCCCEEEECCCCeEEEEeCCC-CCE
Confidence 678999999999999999999 579999999999998842100 0000002588999999999999999999998 699
Q ss_pred EEEEEEeCCCc
Q 029565 145 QMLVVISRPPV 155 (191)
Q Consensus 145 ~~l~v~~~p~~ 155 (191)
+++++...+..
T Consensus 148 ~~l~v~~~~~p 158 (201)
T 1fi2_A 148 YMVVSFNSQNP 158 (201)
T ss_dssp EEEEEESSSCC
T ss_pred EEEEEECCCCC
Confidence 99999865543
No 44
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.42 E-value=8e-13 Score=97.91 Aligned_cols=76 Identities=13% Similarity=0.172 Sum_probs=65.8
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
..+.+...+++||...+.|. ..+|++|||+|+++++++++. +.+++||++++|+|.+|.+.|.++ ++
T Consensus 38 ~~~~~~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~~g~~----------~~l~~GD~v~ip~g~~H~~~~~~~--~~ 104 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTETM-AVDDVMIVLEGRLSVSTDGET----------VTAGPGEIVYMPKGETVTIRSHEE--GA 104 (119)
T ss_dssp CCCEEEEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEETTEE----------EEECTTCEEEECTTCEEEEEEEEE--EE
T ss_pred CCEEEEEEEECCCCCcCccC-CCCEEEEEEeCEEEEEECCEE----------EEECCCCEEEECCCCEEEEEcCCC--Ce
Confidence 46888999999998877764 689999999999999999886 578899999999999999999753 78
Q ss_pred EEEEEEeCC
Q 029565 145 QMLVVISRP 153 (191)
Q Consensus 145 ~~l~v~~~p 153 (191)
+++++.+++
T Consensus 105 ~~l~v~~P~ 113 (119)
T 3lwc_A 105 LTAYVTYPH 113 (119)
T ss_dssp EEEEEEECC
T ss_pred EEEEEECCC
Confidence 888887654
No 45
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.42 E-value=7.9e-13 Score=102.58 Aligned_cols=106 Identities=20% Similarity=0.276 Sum_probs=79.1
Q ss_pred cccCCCeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEe--CEEEEEECC
Q 029565 28 SIKGFPLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLK--GSGTLYLAS 104 (191)
Q Consensus 28 ~~~~~~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~--G~~~v~i~~ 104 (191)
+-+..|.+.++++++..+.+ +|..++.+... .+. .+.+....+ |...+.|+|. .+|++|||+ |+++++++|
T Consensus 12 ~~~~~~~iv~~~ei~~~~~~-~G~srR~l~~~--~~f-p~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idg 85 (157)
T 4h7l_A 12 PSAAMPQMISLSEIEAVACP-CGWAQRAFGHD--AGT-SVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNG 85 (157)
T ss_dssp -CTTSCEEEETTTSCCEEET-TEEEEEESCGG--GCC-SCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETT
T ss_pred ccccCceEEEhhhCCCccCC-CCeeeEEeEcC--CCC-cEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECC
Confidence 45567788899999885553 56555544332 221 234444444 5567899998 679999999 999999999
Q ss_pred eeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 105 SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 105 ~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
+. +.+++||++++|+|+.|++.+ ++++|++.+++.
T Consensus 86 e~----------~~l~~GD~v~IPpg~~H~i~g-----~l~~L~I~~Pp~ 120 (157)
T 4h7l_A 86 QS----------YPLTKLLAISIPPLVRHRIVG-----EATIINIVSPPF 120 (157)
T ss_dssp EE----------EECCTTEEEEECTTCCEEEES-----CEEEEEEEESSC
T ss_pred EE----------EEeCCCCEEEECCCCeEeeEC-----CEEEEEEECCCC
Confidence 87 477899999999999999973 489999987653
No 46
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.42 E-value=1.3e-12 Score=109.77 Aligned_cols=76 Identities=17% Similarity=0.285 Sum_probs=68.9
Q ss_pred eeEEEEEEEECCCCcC--CceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 65 KEIEVWLQTFSPGTRT--PIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~--~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
..+++.+++++||+.. +.|.|..+|++||++|+++++++++. +.+.+||++++|+|.+|+++|.++ +
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~~----------~~L~~GD~i~ip~~~~H~~~N~g~-~ 134 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQV----------HAMQPGGYAFIPPGADYKVRNTTG-Q 134 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSCE----------EEECTTEEEEECTTCCEEEECCSS-S
T ss_pred CcEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCEE----------EEECCCCEEEECCCCcEEEEECCC-C
Confidence 4789999999999876 56788899999999999999999987 578899999999999999999998 6
Q ss_pred cEEEEEEEe
Q 029565 143 DLQMLVVIS 151 (191)
Q Consensus 143 ~~~~l~v~~ 151 (191)
+++++++..
T Consensus 135 ~~~~l~v~~ 143 (278)
T 1sq4_A 135 HTRFHWIRK 143 (278)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 999999874
No 47
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.41 E-value=1.4e-12 Score=109.16 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=80.5
Q ss_pred cCcccCCCeeEecCCCCCCccC-CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC-
Q 029565 26 HCSIKGFPLVRNISELPQDNYG-REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA- 103 (191)
Q Consensus 26 ~~~~~~~~~V~~i~d~~~~~~~-~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~- 103 (191)
+...+..-.|+..++......+ ..+.+...+..+ ..| ..+++.+++++||+..+.|.|..+|++||++|+++++++
T Consensus 30 r~~~~~~~avI~~~~iv~s~lPg~~~~~~~vL~sP-~~G-~~f~~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~ 107 (266)
T 4e2q_A 30 RSVYKRDHALITPESHVYSPLPDWTNTLGAYLITP-ATG-SHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTS 107 (266)
T ss_dssp CCEECSSEEEECGGGCCCEECTTSSSEEEEEEECG-GGT-CSSEEEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--
T ss_pred cEEEEcCeEEECccceEEeeCCCCcCEEEEEEcCC-CCC-CcEEEEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECC
Confidence 3333333344444444332332 234444444444 345 479999999999999888988899999999999999998
Q ss_pred CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 104 SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 104 ~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
++. +.+.+||++++|++.+|+++|. ++++++++.
T Consensus 108 g~~----------~~L~~Gds~y~p~~~~H~~~N~---~~Ar~l~V~ 141 (266)
T 4e2q_A 108 SSS----------KKLTVDSYAYLPPNFHHSLDCV---ESATLVVFE 141 (266)
T ss_dssp CCC----------EEECTTEEEEECTTCCCEEEES---SCEEEEEEE
T ss_pred CcE----------EEEcCCCEEEECCCCCEEEEeC---CCEEEEEEE
Confidence 776 5788999999999999999994 379999985
No 48
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.41 E-value=8.7e-13 Score=113.59 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=76.8
Q ss_pred eeEEEEEEEECCCCcCCceecCC-cEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
+.+.+.+.+++||+..++|+|+. +|++||++|++++.+ +++.. .+.+++||++++|+|.+|.++|.++
T Consensus 232 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~--------~~~l~~GD~~~ip~~~~H~~~n~~~ 303 (361)
T 2vqa_A 232 FNMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKAS--------VSRLQQGDVGYVPKGYGHAIRNSSQ 303 (361)
T ss_dssp TTCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEE--------EEEECTTCEEEECTTCEEEEECCSS
T ss_pred ccceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEE--------EEEECCCCEEEECCCCeEEeEECCC
Confidence 35889999999999999999996 999999999999998 66510 2588999999999999999999998
Q ss_pred CCcEEEEEEEeCCCceeeecCCCC
Q 029565 141 NEDLQMLVVISRPPVKVFIYEDWS 164 (191)
Q Consensus 141 ~e~~~~l~v~~~p~~~~~~~~~w~ 164 (191)
++++++++..++........+|.
T Consensus 304 -~~~~~l~~~~~~~~~~~~~~~~~ 326 (361)
T 2vqa_A 304 -KPLDIVVVFNDGDYQSIDLSTWL 326 (361)
T ss_dssp -SCEEEEEEESSSSCCCEEHHHHH
T ss_pred -CCEEEEEEECCCCcceeeHHHHh
Confidence 69999999977665554555564
No 49
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.40 E-value=2.3e-12 Score=93.29 Aligned_cols=74 Identities=12% Similarity=0.314 Sum_probs=65.2
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
.+.+....++||...+.|+|+.+|++||++|++++.++++. +.+.+||++++|+|++|+++|.+ +++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i~~~~----------~~l~~Gd~i~i~~~~~H~~~~~~---~~~ 103 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQK----------IDLVPEDVLMVPAHKIHAIAGKG---RFK 103 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTEE----------EEECTTCEEEECTTCCBEEEEEE---EEE
T ss_pred CceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEECCEE----------EEecCCCEEEECCCCcEEEEeCC---CcE
Confidence 45677788999999999999999999999999999999987 47889999999999999999962 688
Q ss_pred EEEEEeC
Q 029565 146 MLVVISR 152 (191)
Q Consensus 146 ~l~v~~~ 152 (191)
++++...
T Consensus 104 ~~~i~~~ 110 (114)
T 2ozj_A 104 MLQITLI 110 (114)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 8887654
No 50
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.40 E-value=3.9e-13 Score=96.49 Aligned_cols=78 Identities=17% Similarity=0.231 Sum_probs=63.9
Q ss_pred eEEEEEEEECCCCcCCceecCCc-EEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCE-EIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~e-E~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
++.+++++|+||+.+++|.|+.+ +++++++|++.+..++... .++.+.+||++++|+|..|.++|.++ +++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~-------~~~~l~aGd~~~~p~G~~H~~~N~g~-~~l 87 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTR-------SLAQLKTGRSYARKAGVQHDVRNEST-AEI 87 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCE-------ECCCBCTTCCEEECTTCEEEEEECSS-SCE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcE-------EEEEECCCCEEEECCCCceeCEECCC-CCE
Confidence 78999999999999999999965 4555679999988744320 01478899999999999999999999 699
Q ss_pred EEEEEEe
Q 029565 145 QMLVVIS 151 (191)
Q Consensus 145 ~~l~v~~ 151 (191)
++++|--
T Consensus 88 ~fi~vE~ 94 (98)
T 2ozi_A 88 VFLEIEL 94 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 51
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.38 E-value=1.5e-12 Score=108.88 Aligned_cols=113 Identities=12% Similarity=0.051 Sum_probs=80.0
Q ss_pred cCcccCCCeeEecCCCCCCccC-CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceec-C-CcEEEEEEeCEEEEEE
Q 029565 26 HCSIKGFPLVRNISELPQDNYG-REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRH-S-CEEIFIVLKGSGTLYL 102 (191)
Q Consensus 26 ~~~~~~~~~V~~i~d~~~~~~~-~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H-~-~eE~~~Vl~G~~~v~i 102 (191)
....+....|.+.++....... ..+.....+..+ ..+ ..+++..++++||+....|.| . .+|++||++|++++++
T Consensus 22 ~~~~~~~~~vi~~~~~~~~~~p~~~~~~~~~l~~~-~~~-~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~ 99 (274)
T 1sef_A 22 AVIKKDNYAIIPHDGLVQNAVPGFENVDISILGSP-KLG-ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD 99 (274)
T ss_dssp CEEETTTEEEECGGGCCCCCCTTEEEEEEEECSCG-GGT-CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC
T ss_pred ceEeEcCEEEEChhhcccccCCCCCCeEEEEEcCC-CCC-CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE
Confidence 3445555556665555332221 112222222222 223 368899999999987765433 3 6899999999999999
Q ss_pred CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 103 ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 103 ~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+++. +.|.+||++++|++.+|+++|.++ ++++++++..
T Consensus 100 ~~~~----------~~L~~GD~~~~~~~~~H~~~N~~~-~~~~~l~v~~ 137 (274)
T 1sef_A 100 GQET----------HELEAGGYAYFTPEMKMYLANAQE-ADTEVFLYKK 137 (274)
T ss_dssp SSCE----------EEEETTEEEEECTTSCCEEEESSS-SCEEEEEEEE
T ss_pred CCEE----------EEECCCCEEEECCCCCEEEEeCCC-CCEEEEEEEe
Confidence 9987 578899999999999999999999 6999999873
No 52
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.38 E-value=2.7e-11 Score=88.31 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=59.8
Q ss_pred eEEEEEEEECCCCcCCc---eecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 66 EIEVWLQTFSPGTRTPI---HRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~---H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
.+.+.+.. .+|...+. |.|..+|++||++|+++++++++.. .+.+++||++++|+|.+|+++|.+++.
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~~~--------~~~l~~Gd~i~ipa~~~H~~~n~~~~~ 100 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTA--------PRVMRPGDWLHVPAHCRHRVAWTDGGE 100 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCSS--------CEEECTTEEEEECTTCCEEEEEECSSS
T ss_pred CEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEECCEEE--------EEEECCCCEEEECCCCcEEEEeCCCCC
Confidence 35555553 55665544 6677999999999999999999750 037789999999999999999998733
Q ss_pred cEEEEEEEeC
Q 029565 143 DLQMLVVISR 152 (191)
Q Consensus 143 ~~~~l~v~~~ 152 (191)
++.++++..+
T Consensus 101 ~~~~l~v~~~ 110 (112)
T 2opk_A 101 PTVWLAVHCD 110 (112)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEEe
Confidence 5667777654
No 53
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.37 E-value=4.1e-12 Score=104.40 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=72.3
Q ss_pred CCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEE-E
Q 029565 49 EGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFH-I 127 (191)
Q Consensus 49 ~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~-i 127 (191)
+|+....+... + ..+...+++||...+.|+|+.+|++||++|+++++++++. +.+.+||+++ +
T Consensus 22 ~Gv~~~~l~~~---~---~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~~~----------~~l~~Gd~i~~i 85 (243)
T 3h7j_A 22 NGVRQYSTVRG---D---TEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGDVT----------RKMTALESAYIA 85 (243)
T ss_dssp TSCEEEEEEET---T---EEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETTEE----------EEEETTTCEEEE
T ss_pred CCeEEEEEECC---C---CEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEECCEE----------EEECCCCEEEEc
Confidence 56655544332 2 2556677999999999999999999999999999999987 4788999996 9
Q ss_pred CCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 128 PVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 128 p~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
|+|++|+++|.++ ++++++.+...
T Consensus 86 p~~~~H~~~n~~~-~~~~~l~i~r~ 109 (243)
T 3h7j_A 86 PPHVPHGARNDTD-QEVIAIDIKRL 109 (243)
T ss_dssp CTTCCEEEEECSS-SCEEEEEEEEC
T ss_pred CCCCcEeeEeCCC-CcEEEEEEecc
Confidence 9999999999999 69999988643
No 54
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.37 E-value=7.3e-12 Score=107.80 Aligned_cols=112 Identities=15% Similarity=0.157 Sum_probs=83.5
Q ss_pred CeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE---CCeeee
Q 029565 33 PLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL---ASSSHE 108 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i---~~~~~~ 108 (191)
+.+.++++.+... ...| ....+..........+.+...+++||+..++|+|+ .+|++||++|++++++ +++.
T Consensus 20 ~~~~~~~~~~~~~-~~~G-~~~~~~~~~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~-- 95 (361)
T 2vqa_A 20 AFTYAFSKTPLVL-YDGG-TTKQVGTYNFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKV-- 95 (361)
T ss_dssp CSEECGGGSCCEE-ETTE-EEEEESTTTCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCE--
T ss_pred ceEEEcccCCcee-cCCc-eEEEeChhhCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcE--
Confidence 3666777765432 2233 33333222223334678889999999988999999 9999999999999998 4421
Q ss_pred cCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCc
Q 029565 109 KHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPV 155 (191)
Q Consensus 109 l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~ 155 (191)
+.+.+++||++++|+|.+|.++|.++ ++++++++...+..
T Consensus 96 ------~~~~l~~GD~~~ip~g~~H~~~n~~~-~~~~~l~v~~~~~~ 135 (361)
T 2vqa_A 96 ------EIADVDKGGLWYFPRGWGHSIEGIGP-DTAKFLLVFNDGTF 135 (361)
T ss_dssp ------EEEEEETTEEEEECTTCEEEEEECSS-SCEEEEEEESSTTC
T ss_pred ------EEEEEcCCCEEEECCCCeEEEEeCCC-CCEEEEEEECCCCc
Confidence 12588999999999999999999998 69999998876544
No 55
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.36 E-value=1.2e-11 Score=100.73 Aligned_cols=74 Identities=20% Similarity=0.386 Sum_probs=65.9
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
.+.+..++++||...+.|+|+.+|++||++|++++.++++. +.+.+||++++|+|.+|+++|. . ++++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g~~----------~~l~~Gd~i~ip~~~~H~~~~~-~-~~~~ 219 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVDGKP----------FIVKKGESAVLPANIPHAVEAE-T-ENFK 219 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEETTEE----------EEEETTEEEEECTTSCEEEECC-S-SCEE
T ss_pred CeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEECCEE----------EEECCCCEEEECCCCcEEEEeC-C-CCEE
Confidence 57888999999999999999999999999999999999987 5788999999999999999993 3 4678
Q ss_pred EEEEEe
Q 029565 146 MLVVIS 151 (191)
Q Consensus 146 ~l~v~~ 151 (191)
++.++.
T Consensus 220 ~ll~~v 225 (227)
T 3rns_A 220 MLLILV 225 (227)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887754
No 56
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.35 E-value=7.2e-12 Score=94.53 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=62.3
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+++..++++|| ..|+|. .+|++|||+|+++++++++. +.+.+||++++|+|.+|.++|. +++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~g~~----------~~l~~GD~i~~p~g~~h~~~~~---~~~ 119 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHEGET----------MIAKAGDVMFIPKGSSIEFGTP---TSV 119 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEETTEE----------EEEETTCEEEECTTCEEEEEEE---EEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEECCEE----------EEECCCcEEEECCCCEEEEEeC---CCE
Confidence 688999999999 344454 89999999999999999987 5788999999999999999983 478
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
++++++.++.
T Consensus 120 ~~l~v~~p~~ 129 (133)
T 2pyt_A 120 RFLYVAWPAN 129 (133)
T ss_dssp EEEEEEESTT
T ss_pred EEEEEEcCCc
Confidence 9999886543
No 57
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.35 E-value=1.6e-11 Score=99.97 Aligned_cols=100 Identities=8% Similarity=0.184 Sum_probs=77.1
Q ss_pred CeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCC
Q 029565 33 PLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPG 112 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~g 112 (191)
.-+.++++..... ..+.....+... ....+..+.++||...+.|.|+.++++||++|+++++++|+.
T Consensus 10 ~~~~~l~~~~~~~--~~~~~sr~l~~~-----~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~~------ 76 (227)
T 3rns_A 10 AKPINFNRLITSK--EAEVVSMRILNQ-----PNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENNK------ 76 (227)
T ss_dssp SSCEEHHHHCCCC--TTCEEEEEEEEC-----SSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSCE------
T ss_pred cceEcHHHcCCcC--CCCEEEEehhcC-----CCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCEE------
Confidence 3455655543322 234444444321 146788899999999999999999999999999999999987
Q ss_pred CCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 113 KPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 113 k~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
+.+.+||++++|+|++|.++|.+ +++++++...
T Consensus 77 ----~~l~~Gd~~~~p~~~~H~~~a~~---~~~~l~i~~~ 109 (227)
T 3rns_A 77 ----KTISNGDFLEITANHNYSIEARD---NLKLIEIGEK 109 (227)
T ss_dssp ----EEEETTEEEEECSSCCEEEEESS---SEEEEEEEEC
T ss_pred ----EEECCCCEEEECCCCCEEEEECC---CcEEEEEEee
Confidence 47889999999999999999963 5899988654
No 58
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.34 E-value=5.1e-12 Score=111.11 Aligned_cols=80 Identities=24% Similarity=0.357 Sum_probs=72.3
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCC-CCCc
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTN-ENED 143 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g-~~e~ 143 (191)
..+.+...+++||...+.|+|..++++||++|++.+.+++++ +.+.+||++++|+|.+|.+.|.+ + ++
T Consensus 292 ~tl~~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V~ge~----------~~~~~GD~~~iP~g~~H~~~N~g~~-e~ 360 (394)
T 3bu7_A 292 LTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKR----------FDWSEHDIFCVPAWTWHEHCNTQER-DD 360 (394)
T ss_dssp SSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEE----------EEECTTCEEEECTTCCEEEEECCSS-CC
T ss_pred CeeeEEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEECCEE----------EEEeCCCEEEECCCCeEEeEeCCCC-CC
Confidence 467889999999999999999999999999999999999987 58889999999999999999998 6 68
Q ss_pred EEEEEEEeCCCc
Q 029565 144 LQMLVVISRPPV 155 (191)
Q Consensus 144 ~~~l~v~~~p~~ 155 (191)
+.++++...|..
T Consensus 361 ~~ll~i~D~Pl~ 372 (394)
T 3bu7_A 361 ACLFSFNDFPVM 372 (394)
T ss_dssp EEEEEEESHHHH
T ss_pred eEEEEeeCHHHH
Confidence 999998765544
No 59
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.33 E-value=5.9e-12 Score=109.22 Aligned_cols=78 Identities=21% Similarity=0.272 Sum_probs=70.8
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEE-EECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTL-YLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v-~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
..+.+...+++||...+.|+|..+|++||++|++++ .++++. +.+.+||++++|+|.+|.++|.++ ++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g~~----------~~l~~GD~~~iP~g~~H~~~n~~~-~~ 166 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGER----------TPMNEGDFILTPQWRWHDHGNPGD-EP 166 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTEE----------EECCTTCEEEECTTSCEEEECCSS-SC
T ss_pred CcEEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECCEE----------EEEcCCCEEEECCCCcEEeEeCCC-CC
Confidence 367899999999999999999999999999999999 899987 578899999999999999999998 69
Q ss_pred EEEEEEEeCC
Q 029565 144 LQMLVVISRP 153 (191)
Q Consensus 144 ~~~l~v~~~p 153 (191)
+.++++...+
T Consensus 167 ~~~l~v~d~p 176 (354)
T 2d40_A 167 VIWLDGLDLP 176 (354)
T ss_dssp EEEEEEECHH
T ss_pred EEEEEEECch
Confidence 9999887544
No 60
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.32 E-value=2.6e-12 Score=111.95 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=73.5
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEE-EEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGT-LYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~-v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
..+.+.+.+|+||...+.|+|..+|++||++|++. +.++|++ +.+.+||++++|+|.+|.+.|.|+ ++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG~~----------~~~~~GD~v~iP~g~~H~~~N~gd-e~ 169 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGDP----------VRMSRGDLLLTPGWCFHGHMNDTD-QP 169 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETTEE----------EEEETTCEEEECTTCCEEEEECSS-SC
T ss_pred CceEEEEEEECCCCccCceecccceEEEEEecceEEEEECCEE----------EEEeCCCEEEECCCCcEEeEeCCC-CC
Confidence 46899999999999999999999999999999995 8899987 588999999999999999999999 69
Q ss_pred EEEEEEEeCCCce
Q 029565 144 LQMLVVISRPPVK 156 (191)
Q Consensus 144 ~~~l~v~~~p~~~ 156 (191)
+.++++...|.+.
T Consensus 170 l~~l~v~D~Pl~~ 182 (368)
T 3nw4_A 170 MAWIDGLDIPFSQ 182 (368)
T ss_dssp EEEEEEECHHHHH
T ss_pred eEEEEecchHHHh
Confidence 9999998765553
No 61
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.32 E-value=7.8e-12 Score=101.42 Aligned_cols=80 Identities=20% Similarity=0.304 Sum_probs=69.9
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.++.+.++.++||..+|.|.|+.+|++|||+|++++.++++. .+.+++||++++|+|++|.+++ ++ +|+
T Consensus 130 ~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g~---------~~~l~pGd~v~ipsgv~Ha~rt-~d-ePl 198 (217)
T 4b29_A 130 QSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNAP---------DLMLEPGQTRFHPANAPHAMTT-LT-DPI 198 (217)
T ss_dssp SSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEETTSC---------CEEECTTCEEEECTTCCEEEEC-CS-SCE
T ss_pred CeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCCC---------EEecCCCCEEEcCCCCceeEEE-CC-ccE
Confidence 478899999999999999999999999999999999999433 1588999999999999999996 66 599
Q ss_pred EEEEEEeCCCc
Q 029565 145 QMLVVISRPPV 155 (191)
Q Consensus 145 ~~l~v~~~p~~ 155 (191)
..+++....++
T Consensus 199 lalwvW~G~~~ 209 (217)
T 4b29_A 199 LTLVLWRGAGL 209 (217)
T ss_dssp EEEEEEESTTT
T ss_pred EEEEEEeCCCC
Confidence 88888865554
No 62
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.32 E-value=1.2e-11 Score=107.06 Aligned_cols=79 Identities=22% Similarity=0.179 Sum_probs=65.1
Q ss_pred eEEEEEEEECCCC-cCC--ceecC-CcEEEEEEeCEEEEEECC-----eeeecCCCCCceeeecCCeEEEECCCCcEEEE
Q 029565 66 EIEVWLQTFSPGT-RTP--IHRHS-CEEIFIVLKGSGTLYLAS-----SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 66 ~~~~~~~~i~PG~-~~~--~H~H~-~eE~~~Vl~G~~~v~i~~-----~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~ 136 (191)
.+.+. .++.|++ ..+ +|+|. .+|++||++|++++.+++ +. +.+.+||++++|+|.+|+++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~----------~~L~~GD~v~ip~g~~H~~~ 115 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQT----------RVLSSGDYGSVPRNVTHTFQ 115 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEE----------EEEETTCEEEECTTEEEEEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEE----------EEECCCCEEEECCCCcEEEE
Confidence 56666 4555555 455 89999 899999999999999998 55 58899999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCcee
Q 029565 137 NTNENEDLQMLVVISRPPVKV 157 (191)
Q Consensus 137 N~g~~e~~~~l~v~~~p~~~~ 157 (191)
|.++ ++ ++++++.++.++.
T Consensus 116 n~~~-~~-~~l~v~~p~~~~~ 134 (350)
T 1juh_A 116 IQDP-DT-EMTGVIVPGGFED 134 (350)
T ss_dssp ECST-TE-EEEEEEESSCTTH
T ss_pred eCCC-CC-EEEEEEcCccHHH
Confidence 9988 45 8888888776544
No 63
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.30 E-value=2.6e-11 Score=102.82 Aligned_cols=76 Identities=21% Similarity=0.279 Sum_probs=64.6
Q ss_pred EEEEECC-CCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEE
Q 029565 70 WLQTFSP-GTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQML 147 (191)
Q Consensus 70 ~~~~i~P-G~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l 147 (191)
...++.| |...+.|+|+ .+|++||++|+++++++++. +.+.+||++++|++.+|+++|.++ +++++
T Consensus 220 ~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~~~~----------~~l~~GD~~~ip~~~~H~~~n~~~--~~~~l 287 (337)
T 1y3t_A 220 VVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDGQE----------IQLNPGDFLHVPANTVHSYRLDSH--YTKMV 287 (337)
T ss_dssp EEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETTEE----------EEECTTCEEEECTTCCEEEEECSS--SEEEE
T ss_pred EEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEECCEE----------EEECCCCEEEECCCCeEEEEECCC--CeEEE
Confidence 3445544 6677899999 79999999999999999987 578899999999999999999886 69999
Q ss_pred EEEeCCCcee
Q 029565 148 VVISRPPVKV 157 (191)
Q Consensus 148 ~v~~~p~~~~ 157 (191)
++++++.++.
T Consensus 288 ~v~~~~~~~~ 297 (337)
T 1y3t_A 288 GVLVPGLFEP 297 (337)
T ss_dssp EEEESSTTTH
T ss_pred EEEcCccHHH
Confidence 9988776654
No 64
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.29 E-value=1e-11 Score=109.15 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=71.7
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEE-EECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEe-CCCCC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTL-YLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWN-TNENE 142 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v-~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N-~g~~e 142 (191)
..+.+..++|+||...+.|+|..+|++||++|++.+ .++|+. +.+.+||++++|+|.+|.+.| .++ +
T Consensus 121 ~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G~~----------~~~~~GD~i~~P~g~~H~~~N~~gd-e 189 (394)
T 3bu7_A 121 GWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHK----------VELGANDFVLTPNGTWHEHGILESG-T 189 (394)
T ss_dssp TTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEE----------EEECTTCEEEECTTCCEEEEECTTC-C
T ss_pred CeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECCEE----------EEEcCCCEEEECcCCCEEEEcCCCC-C
Confidence 468889999999999999999988999999999977 888887 588999999999999999999 999 6
Q ss_pred cEEEEEEEeCCCc
Q 029565 143 DLQMLVVISRPPV 155 (191)
Q Consensus 143 ~~~~l~v~~~p~~ 155 (191)
++.++++...|..
T Consensus 190 ~l~~l~v~d~Pl~ 202 (394)
T 3bu7_A 190 ECIWQDGLDIPLT 202 (394)
T ss_dssp CEEEEEEECHHHH
T ss_pred CEEEEEcccchhh
Confidence 9999998754433
No 65
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.27 E-value=3.9e-11 Score=107.83 Aligned_cols=93 Identities=9% Similarity=0.127 Sum_probs=72.6
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCC-CceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGK-PQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk-~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
++.+.+++++||+..++|+|+ ..|++||++|++++.+.+.. |. .-+..+.+||+++||+|.+|.+.| ++ ++
T Consensus 337 ~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~-----G~~~~~~~l~~GDv~viP~G~~H~~~n-g~-~~ 409 (476)
T 1fxz_A 337 RLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCN-----GERVFDGELQEGRVLIVPQNFVVAARS-QS-DN 409 (476)
T ss_dssp TCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTT-----SCEEEEEEEETTCEEEECTTCEEEEEE-CS-TT
T ss_pred cceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecC-----CCEEeeeEEcCCCEEEECCCCeEEEEe-CC-CC
Confidence 688999999999999999999 78999999999999886531 10 001358999999999999999999 77 58
Q ss_pred EEEEEEEeC-CCceeeec--CCCCC
Q 029565 144 LQMLVVISR-PPVKVFIY--EDWSM 165 (191)
Q Consensus 144 ~~~l~v~~~-p~~~~~~~--~~w~~ 165 (191)
+.++++... .+....+. .+|..
T Consensus 410 l~~l~f~~s~~p~~~~laG~~s~~~ 434 (476)
T 1fxz_A 410 FEYVSFKTNDTPMIGTLAGANSLLN 434 (476)
T ss_dssp EEEEEEESSSSCCEEESSSTTCTGG
T ss_pred EEEEEEECCCCCceeEccchhHHHH
Confidence 999999843 33333332 46663
No 66
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.26 E-value=4.3e-11 Score=104.01 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=82.7
Q ss_pred eeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecC
Q 029565 34 LVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKH 110 (191)
Q Consensus 34 ~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~ 110 (191)
.+.++++.+.... ..|... .+..........+.+.++++.||+..++|+|+.+|++||++|++++.+ +|+.+
T Consensus 48 ~~~~~~~~~~~~~-~~G~~~-~~~~~~lp~~~~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~--- 122 (385)
T 1j58_A 48 MKFSFSDTHNRLE-KGGYAR-EVTVRELPISENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSF--- 122 (385)
T ss_dssp CEECGGGSCCEEE-TTEEEE-EECTTTCTTCSSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEE---
T ss_pred eEEEcccCCcccc-CCcEEE-EeccccCcccCceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEE---
Confidence 6777777765332 334333 232222233346889999999999999999999999999999999999 44421
Q ss_pred CCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCc
Q 029565 111 PGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPV 155 (191)
Q Consensus 111 ~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~ 155 (191)
.+.+.+||++++|+|.+|.+.|.++ +++++.++..+..
T Consensus 123 -----~~~l~~GD~~~ip~g~~H~~~n~~~--~~~~~~v~~~~~~ 160 (385)
T 1j58_A 123 -----IDDVGEGDLWYFPSGLPHSIQALEE--GAEFLLVFDDGSF 160 (385)
T ss_dssp -----EEEEETTEEEEECTTCCEEEEEEEE--EEEEEEEESCTTC
T ss_pred -----EEEeCCCCEEEECCCCeEEEEECCC--CEEEEEEECCCCc
Confidence 1478999999999999999999874 5888888876654
No 67
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.25 E-value=7.9e-11 Score=106.47 Aligned_cols=93 Identities=9% Similarity=0.073 Sum_probs=72.7
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCee-eecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSS-HEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~-~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
++.+.+++++||+..++|+|+ ..|++||++|++++.+.+.. ..+. +..+.+||+++||+|.+|.+.| ++ ++
T Consensus 371 ~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~-----~~~l~~GDv~viP~G~~H~~~N-g~-e~ 443 (510)
T 3c3v_A 371 GLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVY-----DEELQEGHVLVVPQNFAVAGKS-QS-DN 443 (510)
T ss_dssp TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEE-----EEEEETTCEEEECTTCEEEEEE-CS-SE
T ss_pred eEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEE-----eEEEcCCcEEEECCCCeEEEEe-CC-CC
Confidence 688999999999999999999 78999999999999875421 0000 1258999999999999999999 77 58
Q ss_pred EEEEEEEeCCCceeeec---CCCCC
Q 029565 144 LQMLVVISRPPVKVFIY---EDWSM 165 (191)
Q Consensus 144 ~~~l~v~~~p~~~~~~~---~~w~~ 165 (191)
+.++++...+.....++ .+|..
T Consensus 444 l~~l~f~~s~~p~~~~LaG~~svf~ 468 (510)
T 3c3v_A 444 FEYVAFKTDSRPSIANLAGENSVID 468 (510)
T ss_dssp EEEEEEESSSSCCEEESSSTTSTTT
T ss_pred EEEEEEECCCCcceeecccHhHHHH
Confidence 99999984433333344 46764
No 68
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.24 E-value=3.4e-11 Score=106.60 Aligned_cols=79 Identities=16% Similarity=0.250 Sum_probs=66.7
Q ss_pred CceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCC
Q 029565 63 GMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTN 139 (191)
Q Consensus 63 g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g 139 (191)
+...+.+.+++++||+..++|+|..+|++||++|++++.+ ++.. ++.+++||++++|+|..|++.|.+
T Consensus 45 ~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~---------~~~l~~GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 45 NLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRD---------SYNLHPGDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp GGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEE---------EEEECTTEEEEECTTCEEEEEECC
T ss_pred CcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCe---------EEEecCCCEEEECCCCeEEEEecC
Confidence 3334899999999999999995558999999999999987 2221 258899999999999999999995
Q ss_pred -CCCcEEEEEEEe
Q 029565 140 -ENEDLQMLVVIS 151 (191)
Q Consensus 140 -~~e~~~~l~v~~ 151 (191)
+ +++++++++.
T Consensus 116 g~-e~l~~l~~~~ 127 (416)
T 1uij_A 116 DH-QNLKMIWLAI 127 (416)
T ss_dssp SS-CCEEEEEEEE
T ss_pred CC-CCEEEEEEec
Confidence 7 6999999875
No 69
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.24 E-value=7.3e-11 Score=97.23 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=63.9
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
..+++.+++++||+..+.|. .+|++||++|+++++++++. +.+.+||++++|++.+|+++|. . ++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~~~~~----------~~l~~Gd~~~~p~~~~H~~~n~-~--~~ 112 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV--YQRFAFVLSGEVDVAVGGET----------RTLREYDYVYLPAGEKHMLTAK-T--DA 112 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS--SEEEEEEEEEEEEEECSSCE----------EEECTTEEEEECTTCCCEEEEE-E--EE
T ss_pred CcEEEEEEEECCCCcCCCCc--eeEEEEEEECEEEEEECCEE----------EEECCCCEEEECCCCCEEEEeC-C--CE
Confidence 47889999999999877775 88999999999999999987 4788999999999999999998 3 78
Q ss_pred EEEEEEe
Q 029565 145 QMLVVIS 151 (191)
Q Consensus 145 ~~l~v~~ 151 (191)
+++++..
T Consensus 113 ~~l~v~~ 119 (246)
T 1sfn_A 113 RVSVFEK 119 (246)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9888873
No 70
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.22 E-value=1.2e-10 Score=89.79 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=61.3
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+.+..+++. ++. .|+|. .+|++|||+|+++++++|+. +.+.+||+++||+|.+|++.|. +++
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~g~~----------~~l~~GD~i~iP~G~~h~~~n~---~~a 128 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIIDGRK----------VSASSGELIFIPKGSKIQFSVP---DYA 128 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEETTEE----------EEEETTCEEEECTTCEEEEEEE---EEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEECCEE----------EEEcCCCEEEECCCCEEEEEeC---CCE
Confidence 6788888886 433 34444 89999999999999999987 5788999999999999999997 279
Q ss_pred EEEEEEeCCCc
Q 029565 145 QMLVVISRPPV 155 (191)
Q Consensus 145 ~~l~v~~~p~~ 155 (191)
+++++..++..
T Consensus 129 ~~l~V~~P~~~ 139 (151)
T 4axo_A 129 RFIYVTYPADW 139 (151)
T ss_dssp EEEEEEECSCC
T ss_pred EEEEEECCCCc
Confidence 99999875544
No 71
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.21 E-value=3.8e-11 Score=85.94 Aligned_cols=65 Identities=12% Similarity=0.192 Sum_probs=53.3
Q ss_pred EEECCCCcCCceecCC-cEEEEEEeCEEEEEECC-eeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEE
Q 029565 72 QTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYLAS-SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVV 149 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i~~-~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v 149 (191)
..+.||. .+.|+|+. +|++||++|++++.+++ +. +.+.+||++++|+|.+|+++|. ++++++++
T Consensus 33 ~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~----------~~l~~Gd~~~ip~~~~H~~~~~---~~~~~l~i 98 (107)
T 2i45_A 33 LVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFADGGS----------MTIREGEMAVVPKSVSHRPRSE---NGCSLVLI 98 (107)
T ss_dssp EEEEEEE-CCCBCC--CCEEEEESSSCEEEEETTSCE----------EEECTTEEEEECTTCCEEEEEE---EEEEEEEE
T ss_pred EEECCCC-CcceeCCCCCEEEEEEeCEEEEEECCCcE----------EEECCCCEEEECCCCcEeeEeC---CCeEEEEE
Confidence 4566775 46999997 99999999999999999 76 5788999999999999999994 35777765
Q ss_pred E
Q 029565 150 I 150 (191)
Q Consensus 150 ~ 150 (191)
.
T Consensus 99 ~ 99 (107)
T 2i45_A 99 E 99 (107)
T ss_dssp E
T ss_pred E
Confidence 4
No 72
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.19 E-value=6.5e-11 Score=102.64 Aligned_cols=78 Identities=22% Similarity=0.384 Sum_probs=69.0
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
.+.+....|+||...++|+|+..|++||++|++++++++++ +.+.+||++++|++.+|++.|. +++.
T Consensus 267 ti~~~~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v~~~~----------~~~~~GD~~~vP~~~~H~~~n~---e~~~ 333 (354)
T 2d40_A 267 SMGAFLQLLPKGFASRVARTTDSTIYHVVEGSGQVIIGNET----------FSFSAKDIFVVPTWHGVSFQTT---QDSV 333 (354)
T ss_dssp SCEEEEEEECTTCBCCCBEESSCEEEEEEEEEEEEEETTEE----------EEEETTCEEEECTTCCEEEEEE---EEEE
T ss_pred cceeEEEEECCCCCCCceecCCcEEEEEEeCeEEEEECCEE----------EEEcCCCEEEECCCCeEEEEeC---CCEE
Confidence 56778889999999999999988999999999999999986 5889999999999999999993 4799
Q ss_pred EEEEEeCCCce
Q 029565 146 MLVVISRPPVK 156 (191)
Q Consensus 146 ~l~v~~~p~~~ 156 (191)
++++...|..+
T Consensus 334 l~~~~d~p~~~ 344 (354)
T 2d40_A 334 LFSFSDRPVQE 344 (354)
T ss_dssp EEEEESHHHHH
T ss_pred EEEEcCHHHHH
Confidence 99987655543
No 73
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.14 E-value=9.3e-11 Score=105.79 Aligned_cols=92 Identities=11% Similarity=0.089 Sum_probs=71.4
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCee-eecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSS-HEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~-~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
++.+.+++++||+..++|+|+ ..|++||++|++++.+.+.. ..+. +..+.+||+++||+|.+|...|. + ++
T Consensus 366 gls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~-----~~~l~~GDv~vvP~G~~H~~~n~-~-e~ 438 (493)
T 2d5f_A 366 GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVF-----DGELRRGQLLVVPQNFVVAEQGG-E-QG 438 (493)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEE-----EEEEETTCEEEECTTCEEEEEEE-E-EE
T ss_pred ceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEE-----eEEEcCCCEEEECCCCeEeeeeC-C-CC
Confidence 478999999999999999999 78999999999999876531 0000 13589999999999999999984 4 58
Q ss_pred EEEEEEEeCCCceeeecCCCC
Q 029565 144 LQMLVVISRPPVKVFIYEDWS 164 (191)
Q Consensus 144 ~~~l~v~~~p~~~~~~~~~w~ 164 (191)
+.++++.+........+.+|.
T Consensus 439 ~~~l~~~ts~~p~~~~l~s~~ 459 (493)
T 2d5f_A 439 LEYVVFKTHHNAVSSYIKDVF 459 (493)
T ss_dssp EEEEEEESSTTCCEEEHHHHH
T ss_pred EEEEEEECCCCCcceeHHHHH
Confidence 999999844333333335555
No 74
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.13 E-value=1.3e-10 Score=103.36 Aligned_cols=82 Identities=17% Similarity=0.261 Sum_probs=66.8
Q ss_pred CceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCC-CC
Q 029565 63 GMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTN-EN 141 (191)
Q Consensus 63 g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g-~~ 141 (191)
+...+.+.+++++||+..++|+|..+|++||++|++.+.+... ++...+.+++||++++|+|..|++.|.+ +
T Consensus 57 ~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~------~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~- 129 (434)
T 2ea7_A 57 NLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNP------DSRDSYILEQGHAQKIPAGTTFFLVNPDDN- 129 (434)
T ss_dssp GGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECS------SCEEEEEEETTEEEEECTTCEEEEEECCSS-
T ss_pred ccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeC------CCCEEEEeCCCCEEEECCCccEEEEeCCCC-
Confidence 3334899999999999999994448999999999999976311 0011358999999999999999999998 6
Q ss_pred CcEEEEEEEe
Q 029565 142 EDLQMLVVIS 151 (191)
Q Consensus 142 e~~~~l~v~~ 151 (191)
+++++++++.
T Consensus 130 e~l~~l~~~~ 139 (434)
T 2ea7_A 130 ENLRIIKLAI 139 (434)
T ss_dssp CCEEEEEEEE
T ss_pred CCeEEEEEec
Confidence 6999999864
No 75
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.12 E-value=7.4e-10 Score=95.74 Aligned_cols=81 Identities=12% Similarity=0.082 Sum_probs=68.4
Q ss_pred eeEEEEEEEECCC---CcCCceecCCcEEEEEEeCEEEEEECC-eeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCC
Q 029565 65 KEIEVWLQTFSPG---TRTPIHRHSCEEIFIVLKGSGTLYLAS-SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 65 ~~~~~~~~~i~PG---~~~~~H~H~~eE~~~Vl~G~~~v~i~~-~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
+.|.+..++++++ ...+.|.|+.++++|||+|+++++++| +. +.+++||++++|+|.+|.++|.++
T Consensus 247 ~~f~~~~i~~~~~~~g~~~~~h~~~~~~~~~vleG~~~i~i~g~~~----------~~l~~Gd~~~iPag~~h~~~~~~~ 316 (350)
T 1juh_A 247 TNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAA----------TELGSGDVAFIPGGVEFKYYSEAY 316 (350)
T ss_dssp GCEEEEEEEECCCCTTSCCCCBCCSSCEEEEEEESCEEEEETTSCC----------EEECTTCEEEECTTCCEEEEESSS
T ss_pred eEEEEEEEeeccccCCCCCCcccCCCcEEEEEEeeEEEEEECCeEE----------EEeCCCCEEEECCCCCEEEEecCC
Confidence 3689999999884 467789999999999999999999999 55 588899999999999999999876
Q ss_pred CCcEEEEEEEeC-CCcee
Q 029565 141 NEDLQMLVVISR-PPVKV 157 (191)
Q Consensus 141 ~e~~~~l~v~~~-p~~~~ 157 (191)
.+.+|++... ..++.
T Consensus 317 --~~~~l~~~~g~~g~~~ 332 (350)
T 1juh_A 317 --FSKVLFVSSGSDGLDQ 332 (350)
T ss_dssp --SEEEEEEEESSSSHHH
T ss_pred --eEEEEEEecCccchhh
Confidence 4777777765 55554
No 76
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.12 E-value=3.8e-10 Score=79.23 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=52.0
Q ss_pred CcCCceecCC-cEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 78 TRTPIHRHSC-EEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 78 ~~~~~H~H~~-eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
+..++|+|+. .|++||++|++++.++++. +.+.+||++++|+|.+|++.|.+ +++++++.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~~~----------~~l~~Gd~~~ip~~~~H~~~~~~---~~~~l~i~ 100 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRDQN----------ITLQAGEMYVIPKGVEHKPMAKE---ECKIMIIE 100 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSSCE----------EEEETTEEEEECTTCCBEEEEEE---EEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECCEE----------EEEcCCCEEEECCCCeEeeEcCC---CCEEEEEE
Confidence 3578999996 9999999999999999986 57889999999999999999973 46776654
No 77
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=99.11 E-value=2.1e-09 Score=83.96 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=78.0
Q ss_pred CCCeeEecCCCCCCccC--CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeee
Q 029565 31 GFPLVRNISELPQDNYG--REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHE 108 (191)
Q Consensus 31 ~~~~V~~i~d~~~~~~~--~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~ 108 (191)
...++.+.++.+..... .+|+....+...... +..+.++.++||+..+.|.|++.|.+|||+|+.... +.
T Consensus 8 ~~~v~v~~~~~~W~~~~~~~~GV~~~~L~~~~~~---g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~--~~--- 79 (165)
T 3cjx_A 8 EKLLTVDTTAHPFLKALGGHEGTDIFPLFMDPYN---GLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT--EY--- 79 (165)
T ss_dssp CSCEEEETTSSCCBCSGGGCTTEEEEEEEEETTT---TEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET--TC---
T ss_pred CceEEEccccCCcEECCCCCCCEEEEEeEeCCCC---CcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC--CC---
Confidence 44677788887664442 347665555432222 345778899999999999999999999999999863 22
Q ss_pred cCCCCCceeeecCCeEEEECCCCcEEEEeCCC-CCcEEEEEEEeC
Q 029565 109 KHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE-NEDLQMLVVISR 152 (191)
Q Consensus 109 l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~-~e~~~~l~v~~~ 152 (191)
+ ++.+.+||.++.|+|..|...+..+ ++++..+++...
T Consensus 80 ---~---~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~G 118 (165)
T 3cjx_A 80 ---P---GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSG 118 (165)
T ss_dssp ---T---TSCEETTEEEEECTTCEECEECCTTCSSCEEEEEEEES
T ss_pred ---c---eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEec
Confidence 0 1367899999999999999998652 136867776653
No 78
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.11 E-value=4.8e-10 Score=100.33 Aligned_cols=97 Identities=6% Similarity=0.044 Sum_probs=74.7
Q ss_pred cCCce--eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCee-eecCCCCCceeeecCCeEEEECCCCcEEEE
Q 029565 61 LHGMK--EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSS-HEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 61 ~~g~~--~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~-~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~ 136 (191)
..+.+ ++.+.++.|.||+..++|+|+ ..|++||++|++.+.+.+.. ..+. +..+.+||+++||+|.+|...
T Consensus 314 fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~-----~~~l~~GDv~v~P~G~~H~~~ 388 (459)
T 2e9q_A 314 LPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVF-----DGEVREGQVLMIPQNFVVIKR 388 (459)
T ss_dssp STTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEE-----EEEEETTCEEEECTTCEEEEE
T ss_pred CccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEE-----eeEEeCCcEEEECCCCEEEEE
Confidence 44444 789999999999999999999 78999999999999875421 0010 124899999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCceeeec---CCCC
Q 029565 137 NTNENEDLQMLVVISRPPVKVFIY---EDWS 164 (191)
Q Consensus 137 N~g~~e~~~~l~v~~~p~~~~~~~---~~w~ 164 (191)
| ++ +++.++++.+.......+. .+|.
T Consensus 389 n-g~-~~~~~l~~~~s~~~~~~~laG~~s~~ 417 (459)
T 2e9q_A 389 A-SD-RGFEWIAFKTNDNAITNLLAGRVSQM 417 (459)
T ss_dssp E-EE-EEEEEEEEESSSSCCEEESSSSSSHH
T ss_pred e-CC-CCeEEEEEecCCCCcceeecchhHHH
Confidence 9 66 5899999985443333344 4665
No 79
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.11 E-value=1.7e-10 Score=83.09 Aligned_cols=58 Identities=7% Similarity=-0.076 Sum_probs=49.7
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEEC-CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA-SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~-~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
.+...||.. +.| |+.+|++||++|++++.++ ++. +.+.+||++++|+|.+|+++|.++
T Consensus 35 ~~~~~pg~~-~~h-H~~~E~~~Vl~G~~~~~i~~g~~----------~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YDTNETCYILEGKVEVTTEDGKK----------YVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp EEEECSEEE-EEE-CSSCEEEEEEEEEEEEEETTCCE----------EEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CCceEEEEEEeCEEEEEECCCCE----------EEECCCCEEEECCCCcEEEEeCCC
Confidence 456777753 456 8899999999999999998 765 588899999999999999999775
No 80
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.10 E-value=6.5e-10 Score=99.48 Aligned_cols=84 Identities=17% Similarity=0.231 Sum_probs=68.6
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC--C--eeeecC--------------CCCCceeeecCCeEEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA--S--SSHEKH--------------PGKPQEHFFFANSTFHI 127 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~--~--~~~~l~--------------~gk~~d~~l~~GD~v~i 127 (191)
++.+.+++|.||+..++|+|...|++||++|++.+.+. + +.|.-. ..| ...+++||++++
T Consensus 62 gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~--~~~l~~GDv~~i 139 (459)
T 2e9q_A 62 GVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQK--IRPFREGDLLVV 139 (459)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECC--CEEEETTEEEEE
T ss_pred ceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccce--eEEecCCCEEEE
Confidence 67899999999999999999999999999999999874 2 111000 001 147999999999
Q ss_pred CCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 128 PVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 128 p~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
|+|++|++.|.++ ++++++++...
T Consensus 140 PaG~~H~~~N~g~-~~l~~l~~~d~ 163 (459)
T 2e9q_A 140 PAGVSHWMYNRGQ-SDLVLIVFADT 163 (459)
T ss_dssp CTTCCEEEEECSS-SCEEEEEEEES
T ss_pred CCCCCEEEEeCCC-CCEEEEEEecC
Confidence 9999999999998 69999998863
No 81
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.07 E-value=4.1e-10 Score=101.24 Aligned_cols=85 Identities=12% Similarity=0.165 Sum_probs=67.9
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCe----eeecC-----CC--------CCceeeecCCeEEEEC
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASS----SHEKH-----PG--------KPQEHFFFANSTFHIP 128 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~----~~~l~-----~g--------k~~d~~l~~GD~v~ip 128 (191)
++.+.+++|.||+...+|+|+..|++||++|++.+.+... ++.-. .| ......+++||++++|
T Consensus 47 gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iP 126 (476)
T 1fxz_A 47 GVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVP 126 (476)
T ss_dssp TCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTEEEEEC
T ss_pred ceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCCEEEEC
Confidence 5789999999999999999999999999999999976531 00000 00 0012579999999999
Q ss_pred CCCcEEEEeCCCCCcEEEEEEEe
Q 029565 129 VNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 129 ~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+|++|++.|.++ +++++++++.
T Consensus 127 aG~~h~~~N~G~-~~l~~i~~~d 148 (476)
T 1fxz_A 127 TGVAWWMYNNED-TPVVAVSIID 148 (476)
T ss_dssp TTCEEEEEECSS-SCEEEEEEEC
T ss_pred CCCcEEEEeCCC-CCEEEEEEec
Confidence 999999999998 6999999985
No 82
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=99.07 E-value=5.9e-10 Score=84.97 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=73.0
Q ss_pred eEecCCCCCCccC----CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecC
Q 029565 35 VRNISELPQDNYG----REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKH 110 (191)
Q Consensus 35 V~~i~d~~~~~~~----~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~ 110 (191)
+.+.++.+..... .+|.....+......+ -.+.+++++||+..+.|.|++.|.+|||+|+.....++..
T Consensus 11 ~i~~~~~~W~~~p~~~~~~Gv~~~~L~~~~~~g---~~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~g~~~---- 83 (145)
T 2o1q_A 11 YVQMDQVDWKPFPAAFSTGGIRWKLLHVSPEMG---SWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRGGKAA---- 83 (145)
T ss_dssp CCCGGGSCCEECCGGGEESCCEEEEEEEETTTT---EEEEEEEECTTEEECCEEESSCEEEEEEEEEEEETTCGGG----
T ss_pred EEccccCccEeCCcccCCCCcEEEEeeECCCcc---cEEEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcCCCEe----
Confidence 3344455544432 4677766665432223 2467788999999999999988889999999996544321
Q ss_pred CCCCceeeecCCeEEEECCCCcEE-EEeCCCCCcEEEEEEEeCC
Q 029565 111 PGKPQEHFFFANSTFHIPVNDAHQ-VWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 111 ~gk~~d~~l~~GD~v~ip~g~~H~-~~N~g~~e~~~~l~v~~~p 153 (191)
.+..+++||.+++|+|..|. ..+. +++.++.+...|
T Consensus 84 ----~~~~~~~Gd~~~~p~g~~H~p~~~~---e~~~~l~~~~gp 120 (145)
T 2o1q_A 84 ----GGDTAIAPGYGYESANARHDKTEFP---VASEFYMSFLGP 120 (145)
T ss_dssp ----TSEEEESSEEEEECTTCEESCCEEE---EEEEEEEEEESC
T ss_pred ----cceEeCCCEEEEECcCCccCCeECC---CCeEEEEEECCc
Confidence 02478899999999999999 5543 356777776544
No 83
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.05 E-value=8.7e-10 Score=99.47 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=68.2
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCee----eecC------CCC----------CceeeecCCeEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSS----HEKH------PGK----------PQEHFFFANSTF 125 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~----~~l~------~gk----------~~d~~l~~GD~v 125 (191)
++.+.+++|.||+...+|+|+..+++||++|++.+.+.... +.-. .|+ -+-+.+++||++
T Consensus 44 gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi 123 (493)
T 2d5f_A 44 GVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVL 123 (493)
T ss_dssp TCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEEE
T ss_pred CEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEEecCCCEE
Confidence 57899999999999999999999999999999999776200 0000 000 012589999999
Q ss_pred EECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 126 HIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 126 ~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
+||+|++|++.|.++ ++++++++..
T Consensus 124 ~iPaG~~h~~~N~g~-~~l~~v~~~d 148 (493)
T 2d5f_A 124 VIPPGVPYWTYNTGD-EPVVAISLLD 148 (493)
T ss_dssp EECTTCCEEEEECSS-SCEEEEEEEC
T ss_pred EECCCCcEEEEeCCC-CCEEEEEEec
Confidence 999999999999999 6999999975
No 84
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.04 E-value=9.7e-10 Score=98.38 Aligned_cols=97 Identities=6% Similarity=0.084 Sum_probs=73.2
Q ss_pred cCCce--eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE-CCeeeecCCCCCceeeecCCeEEEECCCCcEEEE
Q 029565 61 LHGMK--EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL-ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 61 ~~g~~--~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i-~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~ 136 (191)
..+.+ ++.+.++.|.||+..++|||+ ..|+.||++|++.+.+ +.....+. +..+.+||+++||.|.+|..
T Consensus 315 fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f-----~~~l~~GDV~v~P~G~~H~~- 388 (466)
T 3kgl_A 315 LPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVF-----DGQVSQGQLLSIPQGFSVVK- 388 (466)
T ss_dssp CTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEE-----EEEEETTCEEEECTTCEEEE-
T ss_pred CcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEE-----EeEecCCcEEEECCCCeEEE-
Confidence 34444 789999999999999999999 7899999999999964 32110111 24699999999999999987
Q ss_pred eCCCCCcEEEEEEEeCCCceeeec---CCCC
Q 029565 137 NTNENEDLQMLVVISRPPVKVFIY---EDWS 164 (191)
Q Consensus 137 N~g~~e~~~~l~v~~~p~~~~~~~---~~w~ 164 (191)
|.++ +++.++.+.+.......+. .+|.
T Consensus 389 ~ag~-e~~~~l~~f~s~np~~~~LaG~~s~~ 418 (466)
T 3kgl_A 389 RATS-EQFRWIEFKTNANAQINTLAGRTSVL 418 (466)
T ss_dssp EECS-SEEEEEEEESSSSCCEEESSSTTCTG
T ss_pred EcCC-CCEEEEEEECCCCCccccccchhhhh
Confidence 6787 5899999986544333343 3564
No 85
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.03 E-value=1.2e-09 Score=95.20 Aligned_cols=79 Identities=13% Similarity=0.263 Sum_probs=71.4
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
..+.+....|+||..+.+|+|...++++|++|++.++++++. +.+.+||++++|++.+|++.|. +++
T Consensus 277 pti~~~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I~~~~----------~~w~~gD~fvvP~w~~h~~~n~---~~a 343 (368)
T 3nw4_A 277 PTLRCEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVMNGET----------TKLEKGDMFVVPSWVPWSLQAE---TQF 343 (368)
T ss_dssp SSCEEEEEEECTTCBCCCEEESSCEEEEEEESCEEEEETTEE----------EEECTTCEEEECTTCCEEEEES---SSE
T ss_pred hhHHhheEEECCCCccCCeeccccEEEEEEeCcEEEEECCEE----------EEecCCCEEEECCCCcEEEEeC---CCE
Confidence 467899999999999999999999999999999999999987 6899999999999999999996 368
Q ss_pred EEEEEEeCCCce
Q 029565 145 QMLVVISRPPVK 156 (191)
Q Consensus 145 ~~l~v~~~p~~~ 156 (191)
.++.+...|..+
T Consensus 344 ~Lf~~~D~Pl~~ 355 (368)
T 3nw4_A 344 DLFRFSDAPIME 355 (368)
T ss_dssp EEEEEESHHHHH
T ss_pred EEEEEeCHHHHH
Confidence 899888766654
No 86
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.01 E-value=6.4e-10 Score=82.78 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=57.7
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE-CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL-ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i-~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+....++..||... .|.|..+|++|||+|++++++ +++. +.+++||++++|+|.+|.++|.++ .-
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~~E~~~Vl~G~~~l~~~~g~~----------~~l~~GD~~~ip~g~~h~~~~~~~--~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGYIEYCHIIEGEARLVDPDGTV----------HAVKAGDAFIMPEGYTGRWEVDRH--VK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTEEEEEEEEEEEEEEECTTCCE----------EEEETTCEEEECTTCCCEEEEEEE--EE
T ss_pred CEEEEEEEECCCcee-eEcCCCcEEEEEEEEEEEEEECCCeE----------EEECCCCEEEECCCCeEEEEECCc--ee
Confidence 477788888898654 566666899999999999999 5554 588999999999999999999865 23
Q ss_pred EEEEEE
Q 029565 145 QMLVVI 150 (191)
Q Consensus 145 ~~l~v~ 150 (191)
++++++
T Consensus 115 K~yv~~ 120 (123)
T 3bcw_A 115 KIYFVT 120 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555544
No 87
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=4.1e-09 Score=81.76 Aligned_cols=90 Identities=13% Similarity=0.112 Sum_probs=69.3
Q ss_pred CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEE
Q 029565 48 REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHI 127 (191)
Q Consensus 48 ~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~i 127 (191)
.+|+....+...... +..+.+++++||+..+.|.|++.|.+|||+|+..+. +.. ..+.+||.++.
T Consensus 26 ~~Gv~~~~L~~d~~~---g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~-e~~-----------~~~~~Gd~~~~ 90 (159)
T 3ebr_A 26 SNDVMVKYFKIDPVR---GETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK-EHD-----------WVAHAGSVVYE 90 (159)
T ss_dssp CSSSEEEEEEEETTT---TEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEET-TSS-----------CCBCTTCEEEE
T ss_pred CCCEEEEEeeEcCCC---CeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEe-CCC-----------eEECCCeEEEE
Confidence 467766666532122 346778899999999999999999999999998863 221 25679999999
Q ss_pred CCCCcEEEEeC--CCCCcEEEEEEEeCC
Q 029565 128 PVNDAHQVWNT--NENEDLQMLVVISRP 153 (191)
Q Consensus 128 p~g~~H~~~N~--g~~e~~~~l~v~~~p 153 (191)
|+|..|...+. ++ +++.++.+...+
T Consensus 91 P~g~~H~~~~~~~~~-e~~~~~~~~~G~ 117 (159)
T 3ebr_A 91 TASTRHTPQSAYAEG-PDIITFNIVAGE 117 (159)
T ss_dssp CSSEEECEEESSSSS-SCEEEEEEEESC
T ss_pred CCCCcceeEeCCCCC-CCEEEEEEecCc
Confidence 99999999998 66 588888866544
No 88
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.98 E-value=1.5e-09 Score=97.14 Aligned_cols=86 Identities=16% Similarity=0.254 Sum_probs=67.9
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE--CC--eeeecC----------------------------CCC
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL--AS--SSHEKH----------------------------PGK 113 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i--~~--~~~~l~----------------------------~gk 113 (191)
++.+.+.+|.||+..++|+|...|++||++|++.+.+ .+ +.+.-. .-+
T Consensus 49 gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~h 128 (465)
T 3qac_A 49 GVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQH 128 (465)
T ss_dssp TCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC------------------------------CCCC
T ss_pred ceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccccccccccccccccccccc
Confidence 6789999999999999999999999999999998864 22 211000 000
Q ss_pred CceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 114 PQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 114 ~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
-....+++||++++|+|..|++.|.|+ +++++++++..
T Consensus 129 qk~~~~~~GDvi~iPaG~~hw~~N~G~-~~lv~v~~~d~ 166 (465)
T 3qac_A 129 QKIRHLREGDIFAMPAGVSHWAYNNGD-QPLVAVILIDT 166 (465)
T ss_dssp CCEEEEETTEEEEECTTCEEEEECCSS-SCEEEEEEECT
T ss_pred cceeeecCCCEEEECCCCeEEEEcCCC-CCEEEEEEEcC
Confidence 002478999999999999999999999 69999999854
No 89
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.98 E-value=1.1e-09 Score=96.41 Aligned_cols=77 Identities=22% Similarity=0.318 Sum_probs=67.2
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC---CeeeecCCCCCceeeecCCeE------EEECCCCcEEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA---SSSHEKHPGKPQEHFFFANST------FHIPVNDAHQVW 136 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~---~~~~~l~~gk~~d~~l~~GD~------v~ip~g~~H~~~ 136 (191)
.+.+.+.++.||+..++|+|..+|++||++|++.+.+- +.. ++.+++||+ +++|+|..|++.
T Consensus 51 ~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~---------~~~l~~GDv~~~~~~~~iP~G~~h~~~ 121 (397)
T 2phl_A 51 DYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRR---------EYFFLTSDNPIFSDHQKIPAGTIFYLV 121 (397)
T ss_dssp TCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEE---------EEEEEESSCTTSCSEEEECTTCEEEEE
T ss_pred cEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcE---------EEEECCCCcccccceEEECCCCcEEEE
Confidence 48999999999999999999999999999999999862 222 358999999 999999999999
Q ss_pred eCCCCCcEEEEEEEe
Q 029565 137 NTNENEDLQMLVVIS 151 (191)
Q Consensus 137 N~g~~e~~~~l~v~~ 151 (191)
|.+++++++++++..
T Consensus 122 N~g~~~~l~~i~~~~ 136 (397)
T 2phl_A 122 NPDPKEDLRIIQLAM 136 (397)
T ss_dssp ECCSSCCEEEEEEEE
T ss_pred eCCCCCCeEEEEeec
Confidence 999337999998874
No 90
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.97 E-value=1.9e-09 Score=97.53 Aligned_cols=85 Identities=14% Similarity=0.190 Sum_probs=69.2
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCe----eee-----------------------------cCC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASS----SHE-----------------------------KHP 111 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~----~~~-----------------------------l~~ 111 (191)
.++.+.+.+|.||+...+|+|+..+++||++|++.+.+... +|. .+
T Consensus 46 ~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 124 (510)
T 3c3v_A 46 AGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSH- 124 (510)
T ss_dssp HTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEE-
T ss_pred CcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccccccccccccc-
Confidence 36789999999999999999999999999999999965431 000 00
Q ss_pred CCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 112 GKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 112 gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
.| ...+++||+++||+|++|++.|.++ +++++++++...
T Consensus 125 qk--v~~v~~GDvi~iPaG~~hw~~N~g~-~~l~~v~~~d~~ 163 (510)
T 3c3v_A 125 QK--VHRFNEGDLIAVPTGVAFWLYNDHD-TDVVAVSLTDTN 163 (510)
T ss_dssp SC--CEEECTTEEEEECTTCEEEEEECSS-SCEEEEEEECTT
T ss_pred ce--EEEecCCCEEEECCCCCEEEEeCCC-CCEEEEEEeCCC
Confidence 01 1479999999999999999999999 699999998543
No 91
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.96 E-value=2.6e-09 Score=96.61 Aligned_cols=79 Identities=10% Similarity=0.161 Sum_probs=63.5
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCC-CceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGK-PQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk-~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
++.+.+++|.||+..++|+|+ ..|++||++|++.+.+-+.. |+ .-+..|.+||+++||+|.+|...+ ++ +.
T Consensus 393 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~-----G~~v~~~~L~~GDV~v~P~G~~H~~~a-g~-e~ 465 (531)
T 3fz3_A 393 RLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNEN-----GDAILDQEVQQGQLFIVPQNHGVIQQA-GN-QG 465 (531)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT-----SCEEEEEEEETTCEEEECTTCEEEEEE-EE-EE
T ss_pred ceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCC-----CcEEEEEEecCCeEEEECCCCeEEEec-CC-CC
Confidence 678999999999999999999 78999999999999764321 00 013589999999999999996654 55 57
Q ss_pred EEEEEEEe
Q 029565 144 LQMLVVIS 151 (191)
Q Consensus 144 ~~~l~v~~ 151 (191)
+.++++.+
T Consensus 466 l~flaF~s 473 (531)
T 3fz3_A 466 FEYFAFKT 473 (531)
T ss_dssp EEEEEEES
T ss_pred EEEEEEec
Confidence 88887754
No 92
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.92 E-value=1e-08 Score=92.42 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=76.8
Q ss_pred eeEecCCCCCCc-cCCCCcEEEEEEeeccCCce--eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE-CCeeee
Q 029565 34 LVRNISELPQDN-YGREGLAHITVAGSILHGMK--EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL-ASSSHE 108 (191)
Q Consensus 34 ~V~~i~d~~~~~-~~~~G~~~~~~~~~~~~g~~--~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i-~~~~~~ 108 (191)
+..||.+....+ +...|..-..+......+.+ ++.+.++.|.||+..++|||+ ..|++||++|++.+.+ +.....
T Consensus 322 l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~ 401 (496)
T 3ksc_A 322 LRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNT 401 (496)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCE
T ss_pred hhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcE
Confidence 466665432222 22224333333332333333 468999999999999999999 7899999999999964 321111
Q ss_pred cCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 109 KHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 109 l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
+. +..+.+||+++||.|.+|...|. + +++.++++.+..
T Consensus 402 ~f-----~~~l~~GDV~v~P~G~~H~~~a~-~-e~~~~l~f~~s~ 439 (496)
T 3ksc_A 402 VF-----DGELEAGRALTVPQNYAVAAKSL-S-DRFSYVAFKTND 439 (496)
T ss_dssp EE-----EEEEETTCEEEECTTCEEEEEEC-S-SEEEEEEEESST
T ss_pred EE-----EEEecCCeEEEECCCCEEEEEeC-C-CCEEEEEEECCC
Confidence 11 23689999999999999988775 5 589999987443
No 93
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.92 E-value=7e-09 Score=82.83 Aligned_cols=84 Identities=20% Similarity=0.154 Sum_probs=65.5
Q ss_pred CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEE
Q 029565 48 REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHI 127 (191)
Q Consensus 48 ~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~i 127 (191)
.+|+....+... + ...+.++.++||+..+.|.|++.|+.|||+|+.. ++. ..+.+||.+++
T Consensus 111 ~~Gv~~~~L~~~---~--~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~---de~-----------~~~~~Gd~~~~ 171 (195)
T 2q1z_B 111 GGGVRQAILPTG---G--EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR---DET-----------DRFGAGDIEIA 171 (195)
T ss_dssp SSSCEEEEECCS---S--SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE---CSS-----------SEEETTCEEEE
T ss_pred CCCeEEEEEecC---C--CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE---CCc-----------EEECCCeEEEe
Confidence 467665555332 1 2345788999999999999999999999999965 332 26789999999
Q ss_pred CCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 128 PVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 128 p~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
|+|..|+.++.++ +.+.++++..
T Consensus 172 p~g~~H~p~a~~~-~gc~~l~~~d 194 (195)
T 2q1z_B 172 DQELEHTPVAERG-LDCICLAATD 194 (195)
T ss_dssp CSSCCCCCEECSS-SCEEEEEEEC
T ss_pred CcCCccCCEeCCC-CCEEEEEEec
Confidence 9999999999766 5788887753
No 94
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.89 E-value=1.1e-08 Score=91.54 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=67.6
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEE-ECC---eeeecCC------------------------------
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLY-LAS---SSHEKHP------------------------------ 111 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~-i~~---~~~~l~~------------------------------ 111 (191)
++.+.+.++.||+..++|+|+..|++||++|++.+. +.. +++.-..
T Consensus 42 gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (466)
T 3kgl_A 42 GVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQ 121 (466)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC------------------------
T ss_pred CeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhccccccccccccccccccccccccccccccccc
Confidence 789999999999999999999999999999999874 221 2220000
Q ss_pred -------CC-------------CceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 112 -------GK-------------PQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 112 -------gk-------------~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
+. -+-..+++||+++||+|.+|++.|.++ ++++++++...
T Consensus 122 ~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~-e~L~~l~~~d~ 181 (466)
T 3kgl_A 122 GQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGN-QPLVIVSVLDL 181 (466)
T ss_dssp -----------------CCEEESCEEEEETTEEEEECTTCEEEEECCSS-SCEEEEEEEES
T ss_pred cccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCC-CcEEEEEEEcC
Confidence 00 001378999999999999999999998 69999999853
No 95
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.87 E-value=2.5e-08 Score=79.57 Aligned_cols=81 Identities=19% Similarity=0.135 Sum_probs=61.5
Q ss_pred EEEEEEECCCC----------cCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEe
Q 029565 68 EVWLQTFSPGT----------RTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWN 137 (191)
Q Consensus 68 ~~~~~~i~PG~----------~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N 137 (191)
..-.+++.|+. ..+.|.|+.+|++||++|++.+.++++. ++...+.+.+||++++|+|++|++.+
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~-----d~~~~i~v~~GDlIiIPaG~~H~f~~ 149 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKE-----DKWIRISMEKGDMITLPAGIYHRFTL 149 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTT-----SCEEEEEEETTEEEEECTTCCEEEEE
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCcceEEEEEeceEEEEECCCC-----CeEEEEEECCCCEEEECcCCcCCccc
Confidence 34456677775 1378999999999999999999998740 00002478999999999999999999
Q ss_pred CCCCCcEEEEEEEeCCC
Q 029565 138 TNENEDLQMLVVISRPP 154 (191)
Q Consensus 138 ~g~~e~~~~l~v~~~p~ 154 (191)
..+ ..+..+.++...+
T Consensus 150 ~~~-~~~~airlF~~~~ 165 (191)
T 1vr3_A 150 DEK-NYVKAMRLFVGEP 165 (191)
T ss_dssp CTT-CCEEEEEEESSSC
T ss_pred CCC-CCEEEEEEECCCC
Confidence 776 4677777776544
No 96
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.85 E-value=3.9e-08 Score=77.12 Aligned_cols=91 Identities=21% Similarity=0.274 Sum_probs=73.0
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEEC---CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCC
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLA---SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNEN 141 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~---~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~ 141 (191)
++++......||..++.|-|. ...++.|++|+.+.+.- +..... .++..+.+||++++|++..|+++|.++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~----~~~~~l~~G~~~~~~~~~iH~V~N~~~- 142 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAEL----SNSYFVHEGECLISTKGLIHKMSNPTS- 142 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEE----EEEEEEETTCEEEECTTCEEEEECCSS-
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceee----cceEEeCCCcEEEeCCCCEEEEECCCC-
Confidence 689999999999999999999 46788999999997642 211000 013578999999999999999999999
Q ss_pred CcEEEEEEEeCCCceeeecC
Q 029565 142 EDLQMLVVISRPPVKVFIYE 161 (191)
Q Consensus 142 e~~~~l~v~~~p~~~~~~~~ 161 (191)
+++..|-++++|......|+
T Consensus 143 ~~aVSlHvY~pp~~~~~~y~ 162 (171)
T 3eqe_A 143 ERMVSLHVYSPPLEDMTVFE 162 (171)
T ss_dssp SCEEEEEEEESCCCCCCEEC
T ss_pred CCEEEEEEeCCCcccceEEe
Confidence 69999999997776554543
No 97
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.85 E-value=1.2e-08 Score=89.82 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=66.9
Q ss_pred eeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCe-------eeecCCCCCceeeecCCeEEEECCCCcEEEE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASS-------SHEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~-------~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~ 136 (191)
.++.+.++.|.||+..++|+|+ ..|++||++|++.+.+.+. ...+. +..+.+||+++||+|.+|...
T Consensus 237 l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~-----~~~l~~GDV~vvP~G~~h~~~ 311 (397)
T 2phl_A 237 LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESY-----RAELSKDDVFVIPAAYPVAIK 311 (397)
T ss_dssp TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEE-----EEEEETTCEEEECTTCCEEEE
T ss_pred CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEE-----EEEecCCCEEEECCCCeEEEE
Confidence 4789999999999999999999 7899999999999987643 11111 358999999999999999999
Q ss_pred eCCCCCcEEEEEEEeC
Q 029565 137 NTNENEDLQMLVVISR 152 (191)
Q Consensus 137 N~g~~e~~~~l~v~~~ 152 (191)
|.+ ++.++++...
T Consensus 312 n~~---~l~~l~f~~~ 324 (397)
T 2phl_A 312 ATS---NVNFTGFGIN 324 (397)
T ss_dssp ESS---SEEEEEEEES
T ss_pred eCC---CeEEEEEECC
Confidence 985 4888887654
No 98
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.85 E-value=9.2e-09 Score=92.70 Aligned_cols=82 Identities=11% Similarity=0.192 Sum_probs=67.0
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---C-Ceeee---------------cCCCCCceeeecCCeEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---A-SSSHE---------------KHPGKPQEHFFFANSTFH 126 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~-~~~~~---------------l~~gk~~d~~l~~GD~v~ 126 (191)
++.+.+.+|.||+..++|+|...|++||++|++.+.+ + .+.+. .+ -| -..+++||++.
T Consensus 45 gvs~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~-qk--~~~l~~GDV~v 121 (496)
T 3ksc_A 45 GVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRH-QK--VNRFREGDIIA 121 (496)
T ss_dssp TCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCC-CC--EEEECTTEEEE
T ss_pred CceEEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccch-he--eeccCCCCEEE
Confidence 6789999999999999999999999999999999865 2 12210 00 01 13789999999
Q ss_pred ECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 127 IPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 127 ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
||+|..|++.|.|+ +++++++++.
T Consensus 122 iPaG~~h~~~N~G~-~~lv~v~~~d 145 (496)
T 3ksc_A 122 VPTGIVFWMYNDQD-TPVIAVSLTD 145 (496)
T ss_dssp ECTTCEEEEEECSS-SCEEEEEEEC
T ss_pred ECCCCcEEEEcCCC-CCEEEEEEec
Confidence 99999999999999 6999999874
No 99
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.82 E-value=6e-08 Score=76.30 Aligned_cols=99 Identities=21% Similarity=0.191 Sum_probs=70.5
Q ss_pred ccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCC-------cEEEEEEeCEEEEEECCeeee---------
Q 029565 45 NYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSC-------EEIFIVLKGSGTLYLASSSHE--------- 108 (191)
Q Consensus 45 ~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~-------eE~~~Vl~G~~~v~i~~~~~~--------- 108 (191)
++..-|..-+++. ++. ++..+++.+.||...|.|.|+. +|-++|+.|.++++++++...
T Consensus 36 df~~~Gl~l~t~~----N~~-~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg 110 (175)
T 2y0o_A 36 KERKVGLQLFVYV----NTD-RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQE 110 (175)
T ss_dssp CTTTBCEEEEEEE----ECS-SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGG
T ss_pred hhhhcCcEEEEEE----CCc-CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCC
Confidence 3444454444433 233 5899999999999999999996 578889999999999875421
Q ss_pred ----cCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 109 ----KHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 109 ----l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
+..| ..+.+.|||++.+|+|.+|+++| +. +.+.+..+.+.
T Consensus 111 ~~~~~~a~--~~i~L~pGesvtIppg~~H~f~a-ge-egvli~EvSt~ 154 (175)
T 2y0o_A 111 DREHYTVW--HEIELEPGGQYTIPPNTKHWFQA-GE-EGAVVTEMSST 154 (175)
T ss_dssp GGGGCCCC--EEEEECTTCEEEECTTCCEEEEE-EE-EEEEEEEEEEC
T ss_pred ceeeecCC--cEEEECCCCEEEECCCCcEEEEe-CC-CCEEEEEEeCC
Confidence 1111 23589999999999999999999 33 34555555443
No 100
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.81 E-value=1.2e-08 Score=90.19 Aligned_cols=80 Identities=14% Similarity=0.271 Sum_probs=64.3
Q ss_pred CCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE-CC-eeeecCCCCCceeeecCCeEEEECCCCcEEEEeC
Q 029565 62 HGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL-AS-SSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNT 138 (191)
Q Consensus 62 ~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i-~~-~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~ 138 (191)
.+...+.+.+.++.||+..++| |+ ..|++||++|++.+.+ .. ... ...+++||++++|+|..|++.|.
T Consensus 39 ~~l~~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~~--------~~~l~~GDv~~~P~G~~h~~~N~ 109 (418)
T 3s7i_A 39 QNLQNHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGNNRK--------SFNLDEGHALRIPSGFISYILNR 109 (418)
T ss_dssp GGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSCEE--------EEEEETTEEEEECTTCEEEEEEC
T ss_pred ccccceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecCCEE--------EEEecCCCEEEECCCCeEEEEec
Confidence 3434688899999999999999 66 8999999999999865 22 111 25899999999999999999998
Q ss_pred CCCCcEEEEEEE
Q 029565 139 NENEDLQMLVVI 150 (191)
Q Consensus 139 g~~e~~~~l~v~ 150 (191)
++.+.+.++++.
T Consensus 110 g~~~~l~i~~l~ 121 (418)
T 3s7i_A 110 HDNQNLRVAKIS 121 (418)
T ss_dssp CSSCCEEEEEEE
T ss_pred CCCccEEEEEee
Confidence 764577777653
No 101
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.79 E-value=2.3e-08 Score=88.37 Aligned_cols=85 Identities=18% Similarity=0.163 Sum_probs=66.0
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeec-----CC-CCC-cee--eecCCeEEEECCCCcEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEK-----HP-GKP-QEH--FFFANSTFHIPVNDAHQV 135 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l-----~~-gk~-~d~--~l~~GD~v~ip~g~~H~~ 135 (191)
++.+.+..|.||+..++|+|+ ..|++||++|++.+.+-+..-.. .+ +.. +.+ .+.+||+++||+|.+|..
T Consensus 248 ~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~ 327 (416)
T 1uij_A 248 DIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVV 327 (416)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEE
T ss_pred CcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEE
Confidence 578899999999999999999 88999999999999765431000 00 000 123 899999999999999999
Q ss_pred EeCCCCCcEEEEEEEeCC
Q 029565 136 WNTNENEDLQMLVVISRP 153 (191)
Q Consensus 136 ~N~g~~e~~~~l~v~~~p 153 (191)
.|. + ++.++++.+.+
T Consensus 328 ~n~-~--~~~~l~f~~~~ 342 (416)
T 1uij_A 328 NAT-S--NLNFLAFGINA 342 (416)
T ss_dssp EES-S--SEEEEEEEETC
T ss_pred EcC-C--CeEEEEEEcCC
Confidence 998 3 68999987544
No 102
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.79 E-value=4.5e-09 Score=83.09 Aligned_cols=65 Identities=17% Similarity=0.317 Sum_probs=52.4
Q ss_pred CCceecCCcEEEEEEeCEEEEEE--CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 80 TPIHRHSCEEIFIVLKGSGTLYL--ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 80 ~~~H~H~~eE~~~Vl~G~~~v~i--~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
.+.|.|+.+|++||++|++.+.+ +++.+. +.+.+||++++|+|++|++.+.++ ..+..+.++..+
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~--------~~l~~GDli~IP~g~~H~~~~~~~-~~~~~ir~F~~~ 159 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQ--------VLCEKNDLISVPAHTPHWFDMGSE-PNFTAIRIFDNP 159 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECSSCEEE--------EECCCSCEEEECTTCCBCCCCSSC-SSCEEEEEECCG
T ss_pred ccceECChheEEEEEcceEEEEEEeCCEEEE--------EEECCCCEEEECCCCeEeeecCCC-ceEEEEEeccCC
Confidence 47899999999999999999987 666431 358899999999999999998766 356666666544
No 103
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.77 E-value=2.6e-08 Score=88.53 Aligned_cols=85 Identities=15% Similarity=0.163 Sum_probs=65.8
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeec-----CCCCC-cee--eecCCeEEEECCCCcEEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEK-----HPGKP-QEH--FFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l-----~~gk~-~d~--~l~~GD~v~ip~g~~H~~~ 136 (191)
++.+.++.|.||+..++|+|+ ..|++||++|++.+.+-+..-.. .+|.. +.+ .+.+||+++||+|.+|...
T Consensus 265 ~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~ 344 (434)
T 2ea7_A 265 DVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAIN 344 (434)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEE
T ss_pred CcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEE
Confidence 478899999999999999999 78999999999999766432000 00000 013 7899999999999999999
Q ss_pred eCCCCCcEEEEEEEeCC
Q 029565 137 NTNENEDLQMLVVISRP 153 (191)
Q Consensus 137 N~g~~e~~~~l~v~~~p 153 (191)
|. + ++.++++...+
T Consensus 345 n~-~--~~~~v~f~~~~ 358 (434)
T 2ea7_A 345 AT-S--NLNFFAFGINA 358 (434)
T ss_dssp ES-S--SEEEEEEEETC
T ss_pred cC-C--CeEEEEEECCC
Confidence 98 3 58888887544
No 104
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.73 E-value=6.1e-08 Score=86.74 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=64.3
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE-CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCc
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL-ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i-~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
++.+.++.|.||+..++|||+ ..|+.||++|++.+.+ +.....+. +..+.+||+++||.|.+|... .++ ++
T Consensus 322 giS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f-----~~~l~~GDVfvvP~g~~h~~~-ag~-e~ 394 (465)
T 3qac_A 322 RLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVF-----DEELSRGQLVVVPQNFAIVKQ-AFE-DG 394 (465)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEE-----EEEEETTCEEEECTTCEEEEE-EEE-EE
T ss_pred ceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEE-----EEEecCCeEEEECCCcEEEEE-cCC-CC
Confidence 468999999999999999999 7899999999999864 32111111 236899999999999999876 466 58
Q ss_pred EEEEEEEeC
Q 029565 144 LQMLVVISR 152 (191)
Q Consensus 144 ~~~l~v~~~ 152 (191)
+.++.+.+.
T Consensus 395 ~~~l~f~~s 403 (465)
T 3qac_A 395 FEWVSFKTS 403 (465)
T ss_dssp EEEEEEESS
T ss_pred eEEEEEecC
Confidence 999998753
No 105
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.70 E-value=1.7e-07 Score=70.51 Aligned_cols=75 Identities=12% Similarity=0.082 Sum_probs=58.4
Q ss_pred EEEEECCCCcC-----CceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 70 WLQTFSPGTRT-----PIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 70 ~~~~i~PG~~~-----~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
......|+... .+|.|..-+++||++|++++.++++. +.+.+||++++|+|..|.+.+.+++++.
T Consensus 16 G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i~~~~----------~~l~~Gd~~~i~p~~~H~~~~~~~~~~~ 85 (164)
T 2arc_A 16 GLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGRE----------FVCRPGDILLFPPGEIHHYGRHPEAREW 85 (164)
T ss_dssp EEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTEE----------EEECTTCEEEECTTCCEEEEECTTSSEE
T ss_pred cceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEECCEE----------EEecCCeEEEEcCCCCEEEEeCCCCCcE
Confidence 34445555432 36888888999999999999999997 4778999999999999999987631367
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
+++++.-.+.
T Consensus 86 ~~~~i~f~~~ 95 (164)
T 2arc_A 86 YHQWVYFRPR 95 (164)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEECCh
Confidence 8888765443
No 106
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.68 E-value=2.5e-07 Score=75.37 Aligned_cols=100 Identities=20% Similarity=0.199 Sum_probs=72.9
Q ss_pred CeeEecCCCCCCccCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCC
Q 029565 33 PLVRNISELPQDNYGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPG 112 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~g 112 (191)
+++.+.++.+......+|+....+..... .....+.++.++||...+.|.|+..|.+|||+|+.. .++.
T Consensus 11 ~v~i~~~~~~W~~~~~~Gv~~~~L~~~~~--e~g~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d~~~------- 79 (223)
T 3o14_A 11 PVVIDTDQLEWRPSPMKGVERRMLDRIGG--EVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEHG------- 79 (223)
T ss_dssp CEEEEGGGSCCEECSSTTEEEEEEEEESS--SSCEEEEEEEECTTEECCCEECTTCEEEEEEEEEEE--ETTE-------
T ss_pred eEEeeCccCCceeCCCCCEEEEEeecCCC--ccccEEEEEEECCCCCcccccCCCCEEEEEEEeEEE--ECCe-------
Confidence 45556666665444357877666644311 123456788999999999999999999999999975 3332
Q ss_pred CCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 113 KPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 113 k~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
.+.+||.++.|+|..|.... + +.|.+++...
T Consensus 80 -----~~~~Gd~~~~P~g~~H~p~a--~-~gc~~~vk~~ 110 (223)
T 3o14_A 80 -----DYPAGTYVRNPPTTSHVPGS--A-EGCTIFVKLW 110 (223)
T ss_dssp -----EEETTEEEEECTTCEECCEE--S-SCEEEEEEES
T ss_pred -----EECCCeEEEeCCCCccccEe--C-CCCEEEEEec
Confidence 56799999999999999887 3 3677777663
No 107
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.68 E-value=1.1e-07 Score=74.47 Aligned_cols=74 Identities=23% Similarity=0.328 Sum_probs=54.9
Q ss_pred EECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 73 TFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 73 ~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
.-.||+....|.|+.+|++||++|++.+.+.++ |+.+++.+++||++++|+|++|+-...+. +...+++--.+
T Consensus 41 v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~------g~~~~v~l~eGE~f~lP~gvpH~P~r~~~-e~~~lviE~~r 113 (174)
T 1yfu_A 41 VGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD------GRRERADLKEGDIFLLPPHVRHSPQRPEA-GSACLVIERQR 113 (174)
T ss_dssp ECSCBCCCCEEECSSCEEEEEEESCEEEEEEET------TEEEEEEECTTCEEEECTTCCEEEEBCCT-TCEEEEEEECC
T ss_pred EcCCCcCccCcCCCCceEEEEEeeEEEEEEEcC------CceeeEEECCCCEEEeCCCCCcCccccCC-CCEEEEEEeCC
Confidence 345777899999999999999999999987542 11224789999999999999999876552 23444443333
Q ss_pred C
Q 029565 153 P 153 (191)
Q Consensus 153 p 153 (191)
+
T Consensus 114 ~ 114 (174)
T 1yfu_A 114 P 114 (174)
T ss_dssp C
T ss_pred C
Confidence 3
No 108
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.67 E-value=6.2e-07 Score=72.29 Aligned_cols=87 Identities=20% Similarity=0.230 Sum_probs=69.7
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE----CCeeeecCCCCCceeeecCCeEEEECC--CCcEEEEeC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL----ASSSHEKHPGKPQEHFFFANSTFHIPV--NDAHQVWNT 138 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i----~~~~~~l~~gk~~d~~l~~GD~v~ip~--g~~H~~~N~ 138 (191)
.++++......||..++.|.|....++.|++|+.+.+. ++.. .+..++ +..+.+|+++++++ |..|++.|.
T Consensus 77 ~~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~-~l~~~~--~~~l~~G~v~~~~~~~g~iH~V~N~ 153 (208)
T 2gm6_A 77 ERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGR-PVLHGE--PTRLEPGHVEAVSPTVGDIHRVHNA 153 (208)
T ss_dssp SSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSC-EEECSC--CEEECTTCEEEEBTTTBCCEEEEES
T ss_pred CCEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCc-cccccc--eEEeCCCCEEEECCCCCCeEEeccC
Confidence 37899999999999999999999899999999998764 2211 111121 35899999999999 999999999
Q ss_pred -CCCCcEEEEEEEeCCCc
Q 029565 139 -NENEDLQMLVVISRPPV 155 (191)
Q Consensus 139 -g~~e~~~~l~v~~~p~~ 155 (191)
++ +++..|-++.++..
T Consensus 154 ~~~-~~avsLHvY~~~~~ 170 (208)
T 2gm6_A 154 YDD-RVSISIHVYGANIG 170 (208)
T ss_dssp CSS-SCEEEEEEESSCGG
T ss_pred CCC-CcEEEEEEEcCCCC
Confidence 56 68999999876543
No 109
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.59 E-value=3.6e-07 Score=70.40 Aligned_cols=107 Identities=12% Similarity=-0.012 Sum_probs=74.6
Q ss_pred CCeeEecCCCCCCccC----CCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeee
Q 029565 32 FPLVRNISELPQDNYG----REGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSH 107 (191)
Q Consensus 32 ~~~V~~i~d~~~~~~~----~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~ 107 (191)
...+.+.++++....+ .+|+....+...... +..+.+++++||...+.|+|+..|.++||+|+....-++..
T Consensus 10 ~~~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~~e~---g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~- 85 (153)
T 3bal_A 10 AEEYVKISDNNYVPFPEAFSDGGITWQLLHSSPET---SSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGGEQE- 85 (153)
T ss_dssp CCEEEECCGGGCEECCGGGEESCCEEEEEEEETTT---TEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETTCGGG-
T ss_pred cceEEccccCceecCCCccCCCCeEEEEEEECCcc---ceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecCcccc-
Confidence 3455566676665553 468777777554333 45677889999999999999999999999999977543321
Q ss_pred ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 108 EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 108 ~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
++-.+.+|+.++-|+|..|...-..+ ...++.+..
T Consensus 86 -------~~~~~~aGsYv~ePpGs~H~p~~~~~--~~~~~~~~~ 120 (153)
T 3bal_A 86 -------GGSTAYAPSYGFESSGALHGKTFFPV--ESQFYMTFL 120 (153)
T ss_dssp -------TSEEEESSEEEEECTTCEESCCEESS--CEEEEEEEE
T ss_pred -------CccccCCCeEEEcCCCCcccceeCCC--CeEEEEEEE
Confidence 12367899999999999998533222 344555544
No 110
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.56 E-value=2.3e-07 Score=82.73 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=63.8
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCe-----------eeecCCCCCceeeecCCeEEEECCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASS-----------SHEKHPGKPQEHFFFANSTFHIPVNDAH 133 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~-----------~~~l~~gk~~d~~l~~GD~v~ip~g~~H 133 (191)
++.+.++.+.||+..++|+|+ ..|+.||++|++.+.+-+. .+.+ -+..+++||+++||.|.+|
T Consensus 280 ~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~-----~~~~l~~GdV~vvP~g~~h 354 (445)
T 2cav_A 280 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRR-----YAATLSEGDIIVIPSSFPV 354 (445)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEE-----EEEEECTTCEEEECTTCCE
T ss_pred CCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEE-----EEeEecCCcEEEEcCCcEE
Confidence 689999999999999999999 8999999999999865322 1111 1357999999999999999
Q ss_pred EEEeCCCCCcEEEEEEE
Q 029565 134 QVWNTNENEDLQMLVVI 150 (191)
Q Consensus 134 ~~~N~g~~e~~~~l~v~ 150 (191)
...|. + ++.++++.
T Consensus 355 ~~~n~-~--~~~~v~f~ 368 (445)
T 2cav_A 355 ALKAA-S--DLNMVGIG 368 (445)
T ss_dssp EEEES-S--SEEEEEEE
T ss_pred EEEcC-C--CeEEEEEE
Confidence 99997 3 58888875
No 111
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.56 E-value=2.7e-07 Score=83.49 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=66.7
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE--CC--eeee---------------------------------
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL--AS--SSHE--------------------------------- 108 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i--~~--~~~~--------------------------------- 108 (191)
++.+.+.+|.||+-.++|+|+..|++||++|++.+-+ -| ++|.
T Consensus 47 Gvs~~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (531)
T 3fz3_A 47 GVAASRITIQRNGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQ 126 (531)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCCC-----------------------------
T ss_pred cceEEEEEecCCCEeCCccCCCCeEEEEEECcEEEEEEcCCCcccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999999999999998632 11 1110
Q ss_pred ------------------------------------------cCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEE
Q 029565 109 ------------------------------------------KHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQM 146 (191)
Q Consensus 109 ------------------------------------------l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~ 146 (191)
-+ -| -+.+++||++.||+|+.|+++|.++ +++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~h-qk--v~~vr~GDviaiPaG~~~w~yN~G~-~~l~i 202 (531)
T 3fz3_A 127 EQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRH-QK--TRRIREGDVVAIPAGVAYWSYNDGD-QELVA 202 (531)
T ss_dssp --------------------------------------CCSCEE-SC--CEEEETTEEEEECTTCCEEEECCSS-SCEEE
T ss_pred ccccccccccccchhccccccccccccccccccccccccccccc-ee--eecccCCcEEEECCCCeEEEEeCCC-ceEEE
Confidence 00 11 2478999999999999999999999 69999
Q ss_pred EEEEe
Q 029565 147 LVVIS 151 (191)
Q Consensus 147 l~v~~ 151 (191)
+++..
T Consensus 203 v~~~D 207 (531)
T 3fz3_A 203 VNLFH 207 (531)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99884
No 112
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=98.53 E-value=3.2e-06 Score=62.21 Aligned_cols=96 Identities=15% Similarity=0.029 Sum_probs=64.0
Q ss_pred CeeEec-CCCCCCccCC----CCcEEEEEEee-ccCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCee
Q 029565 33 PLVRNI-SELPQDNYGR----EGLAHITVAGS-ILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSS 106 (191)
Q Consensus 33 ~~V~~i-~d~~~~~~~~----~G~~~~~~~~~-~~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~ 106 (191)
+.++|| +|+....... -|.......+. ...| .+........||.. ..+.+..+|++|||+|+++++.++..
T Consensus 4 ~~~~~~~~~~~~~p~~pa~~r~~~~~~~~~~~~~~~g--~~~~GvWe~tPG~~-~~~~~~~~E~~~iLeG~~~lt~ddG~ 80 (116)
T 3es4_A 4 MPIFNISDDVDLVPAMPAEGRDGGSYRRQIWQDDVEN--GTIVAVWMAEPGIY-NYAGRDLEETFVVVEGEALYSQADAD 80 (116)
T ss_dssp SSEEETTCCCSCEECCCCTTCSSCEEEEEEEECSSSS--CCEEEEEEECSEEE-EECCCSEEEEEEEEECCEEEEETTCC
T ss_pred CceEccccccCcCCCCCcceeecCcceEEEEeeCCCC--CEEEEEEecCCcee-ECeeCCCcEEEEEEEeEEEEEeCCCe
Confidence 456788 6766443321 12222222222 2334 45666778999864 33445556999999999999987643
Q ss_pred eecCCCCCceeeecCCeEEEECCCCcEEEEeCCC
Q 029565 107 HEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 107 ~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
.+.+++||++++|+|..-.+.-...
T Consensus 81 ---------~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 81 ---------PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp ---------CEEECTTEEEEECTTCCEEEEECSC
T ss_pred ---------EEEECCCCEEEECCCCeEEEEEeEE
Confidence 2588999999999999998877644
No 113
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.47 E-value=6.2e-07 Score=70.12 Aligned_cols=76 Identities=22% Similarity=0.276 Sum_probs=54.6
Q ss_pred CCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 75 SPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 75 ~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
.|+.....|.|+.+|++|+++|++.+.+.++.. .+++.+++.+++||++.+|+|++|+-.-..+ ...+++--.++.
T Consensus 42 GPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~--~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e--~v~lviErkR~~ 117 (176)
T 1zvf_A 42 GPNERTDYHINPTPEWFYQKKGSMLLKVVDETD--AEPKFIDIIINEGDSYLLPGNVPHSPVRFAD--TVGIVVEQDRPG 117 (176)
T ss_dssp SSBCCSCEEECSSCEEEEEEESCEEEEEEECSS--SSCEEEEEEECTTEEEEECTTCCEEEEECTT--CEEEEEEECCCS
T ss_pred CCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCC--cccceeeEEECCCCEEEcCCCCCcCCcccCC--cEEEEEEecCCC
Confidence 456778999777999999999999998765210 0002345799999999999999999865433 455555444444
No 114
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.44 E-value=5.2e-07 Score=76.90 Aligned_cols=77 Identities=21% Similarity=0.387 Sum_probs=61.5
Q ss_pred EEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecC-C---eEEEECCCCcEEEEeCCCCC
Q 029565 68 EVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFA-N---STFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~-G---D~v~ip~g~~H~~~N~g~~e 142 (191)
.....+..||.....|+|. ..|.++|++|++.+.+.... .|+. +.+.. | +.+++|+|..|.+.|.|+ +
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~ip~g~~h~~~n~~~-~ 345 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVN----DDEI--IEYYVSGDKLEVVDIPVGYTHNIENLGD-T 345 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETT----CCCC--EEEEEETTBCCEEEECTTEEEEEEECSS-S
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCC----CCcE--EEEEecCCcceEEEeCCCceEEeEEcCC-C
Confidence 4567789999999999999 78999999999999654211 1332 34445 7 899999999999999998 5
Q ss_pred cEEEEEEEe
Q 029565 143 DLQMLVVIS 151 (191)
Q Consensus 143 ~~~~l~v~~ 151 (191)
++.++...+
T Consensus 346 ~~~~~~~~~ 354 (369)
T 3st7_A 346 DMVTIMWVN 354 (369)
T ss_dssp CEEEEEEES
T ss_pred cEEEEEecC
Confidence 898888765
No 115
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.44 E-value=1.6e-06 Score=69.45 Aligned_cols=95 Identities=20% Similarity=0.222 Sum_probs=73.0
Q ss_pred eeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE-C---CeeeecCCCCCceeeecCCeEEEE-CCCCcEEEEeC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL-A---SSSHEKHPGKPQEHFFFANSTFHI-PVNDAHQVWNT 138 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i-~---~~~~~l~~gk~~d~~l~~GD~v~i-p~g~~H~~~N~ 138 (191)
.++++......||..++.|-|. ...++.||+|+.+.+. + +....+..+ .+..+.+|++.++ |++..|++.|.
T Consensus 68 ~~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~--~~~~l~~G~v~~~~~~~giH~V~N~ 145 (200)
T 3eln_A 68 GKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKK--SERTLRENQCAYINDSIGLHRVENV 145 (200)
T ss_dssp GTCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEE--EEEEECTTCEEEECTTTCEEEEECC
T ss_pred CceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCccccccc--ceEEeCCCCEEEecCCCcEEEEECC
Confidence 3689999999999999999999 6889999999999864 2 111011111 1357899999999 78889999999
Q ss_pred CCCCcEEEEEEEeCCCceeeecC
Q 029565 139 NENEDLQMLVVISRPPVKVFIYE 161 (191)
Q Consensus 139 g~~e~~~~l~v~~~p~~~~~~~~ 161 (191)
+.++++.-|-++++|..+...|+
T Consensus 146 s~~~~avSlHvY~pp~~~~~~yd 168 (200)
T 3eln_A 146 SHTEPAVSLHLYSPPFDTCHAFD 168 (200)
T ss_dssp CSSCCEEEEEEEESCCSEEEEEC
T ss_pred CCCCCEEEEEeCCCCccceEEEE
Confidence 83268999999987776655554
No 116
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.43 E-value=5.5e-07 Score=79.67 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=61.0
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecC---CC-----------------CCceeeecCCeE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKH---PG-----------------KPQEHFFFANST 124 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~---~g-----------------k~~d~~l~~GD~ 124 (191)
++.+.+.+|.||+..++|+|+ ..|+.||++|++.+.+=+..-.-. .+ +.-+..+++||+
T Consensus 262 gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV 341 (418)
T 3s7i_A 262 DMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDV 341 (418)
T ss_dssp TCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCE
T ss_pred CeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCE
Confidence 479999999999999999998 899999999999885321100000 00 011357899999
Q ss_pred EEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 125 FHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 125 v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
+++|+|.+|...|.+ ++.++++.
T Consensus 342 ~vvP~G~~~~~~~~~---~l~~v~f~ 364 (418)
T 3s7i_A 342 FIMPAAHPVAINASS---ELHLLGFG 364 (418)
T ss_dssp EEECTTCCEEEEESS---CEEEEEEE
T ss_pred EEECCCCEEEEECCC---CEEEEEEE
Confidence 999999999998843 47777764
No 117
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.23 E-value=2.4e-05 Score=63.18 Aligned_cols=88 Identities=19% Similarity=0.200 Sum_probs=68.9
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEE----CCeeeecCCCCCceeeecCCeEEEECCC--CcEEEEeC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL----ASSSHEKHPGKPQEHFFFANSTFHIPVN--DAHQVWNT 138 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i----~~~~~~l~~gk~~d~~l~~GD~v~ip~g--~~H~~~N~ 138 (191)
..+++......||..++.|-|...-++.|++|+.+.+. ++.. .+..+. +..+.+||++++.++ ..|++.|.
T Consensus 71 ~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~-~~~~~~--~~~l~~G~v~~~~p~~g~IH~V~N~ 147 (211)
T 3uss_A 71 QRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGR-PHPSGA--RRRLEPGEVEALSPRIGDVHQVSNA 147 (211)
T ss_dssp SSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSC-EEECSC--CEEECTTCEEEEBTTTBCCEEEEES
T ss_pred CCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCC-cccccc--eEEecCCCEEEECCCCCCEEEEccC
Confidence 37999999999999999999998889999999998754 2221 111121 257999999999988 89999999
Q ss_pred CCCCcEEEEEEEeCCCc
Q 029565 139 NENEDLQMLVVISRPPV 155 (191)
Q Consensus 139 g~~e~~~~l~v~~~p~~ 155 (191)
+.++++.-|-+++++..
T Consensus 148 ~~d~~avSLHvYg~pl~ 164 (211)
T 3uss_A 148 FSDRTSISIHVYGANIG 164 (211)
T ss_dssp CSSSCEEEEEEESSCGG
T ss_pred CCCCCEEEEEEcCCCCC
Confidence 63368888888876554
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.20 E-value=3e-06 Score=70.85 Aligned_cols=66 Identities=27% Similarity=0.342 Sum_probs=50.8
Q ss_pred CCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 75 SPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 75 ~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
-|+.+..+| |. .+|++|+++|.+.+.+-++ |+.+++.+++|+++++|+|++|+-....+ ...++|-
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~------g~~~~V~i~eGemfllP~gv~HsP~r~~e---t~gLviE 105 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ------GKHRDVVIRQGEIFLLPARVPHSPQRFAN---TVGLVVE 105 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET------TEEEEEEECTTEEEEECTTCCEEEEECTT---CEEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC------CceeeEEECCCeEEEeCCCCCcCCcccCC---eEEEEEe
Confidence 345668899 87 8999999999999976542 33446899999999999999999977443 4444443
No 119
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.16 E-value=5.1e-06 Score=62.76 Aligned_cols=80 Identities=16% Similarity=0.246 Sum_probs=56.0
Q ss_pred EEEEEEECCCC----cCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 68 EVWLQTFSPGT----RTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 68 ~~~~~~i~PG~----~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
.+......|.. -...|.|. .+|+++|++|++++.+.+..- ..++.+.+.+.+|+++.+|.|++|......
T Consensus 26 ~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~--~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--- 100 (140)
T 3d0j_A 26 LVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKEN--DKFNIELTLMEKGKVYNVPAECWFYSITQK--- 100 (140)
T ss_dssp EEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEET--TEEEEEEEECCTTCCEEECTTCEEEEEECT---
T ss_pred EEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcC--CCCccceEEecCCCEEEeCCCccCcccCCC---
Confidence 33444445553 33479999 899999999999998874310 000011368899999999999999998853
Q ss_pred cEEEEEEEeC
Q 029565 143 DLQMLVVISR 152 (191)
Q Consensus 143 ~~~~l~v~~~ 152 (191)
++.++.|-..
T Consensus 101 e~~vLLiEp~ 110 (140)
T 3d0j_A 101 DTKMMYVQDS 110 (140)
T ss_dssp TCEEEEEEES
T ss_pred ceEEEEEEeC
Confidence 4677777655
No 120
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.08 E-value=1.2e-05 Score=60.99 Aligned_cols=76 Identities=18% Similarity=0.173 Sum_probs=56.6
Q ss_pred EEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeec-CCeEEEECCCCcEEEEeCCCCCcEEEEE
Q 029565 71 LQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFF-ANSTFHIPVNDAHQVWNTNENEDLQMLV 148 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~-~GD~v~ip~g~~H~~~N~g~~e~~~~l~ 148 (191)
...++||...+.|.|. ..|++++++|+..+.+++... .+++.|. +...++||+|++|.+.|.++ .+.+++
T Consensus 39 ~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~------~~~~~L~~~~~gL~IppgvWh~~~~~s~--~avllv 110 (141)
T 2pa7_A 39 IFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNI------IQEITLDSPAVGLYVGPAVWHEMHDFSS--DCVMMV 110 (141)
T ss_dssp EESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSC------EEEEEECCTTEEEEECTTCEEEEECCCT--TCEEEE
T ss_pred EEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcE------EEEEEECCCCcEEEeCCCEEEEEEEcCC--CeEEEE
Confidence 3446688888999999 789999999999998865421 1123443 34569999999999999987 477777
Q ss_pred EEeCCC
Q 029565 149 VISRPP 154 (191)
Q Consensus 149 v~~~p~ 154 (191)
+.+.+-
T Consensus 111 las~~Y 116 (141)
T 2pa7_A 111 LASDYY 116 (141)
T ss_dssp EESSCC
T ss_pred ECCCCc
Confidence 765433
No 121
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=98.07 E-value=0.00014 Score=59.40 Aligned_cols=124 Identities=17% Similarity=0.221 Sum_probs=85.3
Q ss_pred ecCCCCCCccCCCCcEEEEEEeeccCC---ceeEEEEEEEECCCCcCCceecC-CcEEEEEEeC----------------
Q 029565 37 NISELPQDNYGREGLAHITVAGSILHG---MKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKG---------------- 96 (191)
Q Consensus 37 ~i~d~~~~~~~~~G~~~~~~~~~~~~g---~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G---------------- 96 (191)
++.|--..++..-|..-++++-..... .+.+.-+.+.+.+|...|.|.|. -.|-+++.-|
T Consensus 73 DITDfG~gdF~~~GL~LfT~rNG~~~d~~~~k~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~ 152 (246)
T 3kmh_A 73 DVTAFGRNNFAAHGLTLFTLRNGSAKGMPYVKCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQT 152 (246)
T ss_dssp EEECTTSSCTTTBCEEEEEEECCCTTSCSCCCCEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSB
T ss_pred EEecCCCCchhhcCCEEEEEECCCCccccCCCcceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccc
Confidence 344444445555676666655421111 24789999999999999999999 6777777666
Q ss_pred ---EEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC--CceeeecCC
Q 029565 97 ---SGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP--PVKVFIYED 162 (191)
Q Consensus 97 ---~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p--~~~~~~~~~ 162 (191)
.+.+.++|..+.+.+|. .+.|.||+++.+++|+.|+|+..+...++.+-.|.+.. ..+..|++.
T Consensus 153 ~~~~v~V~~DG~~~~~~aG~--~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt~NDD~~DN~F~~p 221 (246)
T 3kmh_A 153 ADSDITVVIDGCRQKHTAGS--QLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNHFLQP 221 (246)
T ss_dssp CCSCEEEEETTEEEEECTTC--EEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEECCCTTTSEEESSC
T ss_pred cCCCeEEecCCeEEEeCCCC--EEEECCCCeEecCCCCEEEEEecCCCccEEEEEcccCcCCCCCccccCC
Confidence 45567777777787775 47999999999999999999997752246565565432 233345543
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.98 E-value=6.1e-05 Score=61.82 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=55.8
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
.+.+..+.+ .|.. ..-.++++|+.|||+|+++++.+++. +.+++||+++||.|..|.+...+. -..
T Consensus 46 ~~~~G~~~~-~g~~-~v~~~p~dE~~~VleG~~~lt~~g~~----------~~~~~Gd~~~ip~G~~~~w~~~~~--~~~ 111 (238)
T 3myx_A 46 GIAAGIVEF-GTAL-SVEAYPYTEMLVMHRGSVTLTSGTDS----------VTLSTGESAVIGRGTQVRIDAQPE--SLW 111 (238)
T ss_dssp SEEEEEEEE-CSEE-EESSCSSEEEEEEEESEEEEEETTEE----------EEEETTCEEEECTTCCEEEEECTT--EEE
T ss_pred CeEEEEEEe-cccc-ccccCCCcEEEEEEEeEEEEECCCeE----------EEEcCCCEEEECCCCEEEEEecCC--eEE
Confidence 577778888 5543 22334568999999999999988776 588999999999999999999765 345
Q ss_pred EEEEEe
Q 029565 146 MLVVIS 151 (191)
Q Consensus 146 ~l~v~~ 151 (191)
+++.+.
T Consensus 112 ~y~~~~ 117 (238)
T 3myx_A 112 AFCAST 117 (238)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 555555
No 123
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.90 E-value=4e-05 Score=62.66 Aligned_cols=75 Identities=13% Similarity=0.079 Sum_probs=59.2
Q ss_pred ceeEEEEEEEECCCCcC--CceecCCcEEEEEEeCEEEEEECCe---eeecCCCCCceeeecCCeEEEECCCCcEEEEeC
Q 029565 64 MKEIEVWLQTFSPGTRT--PIHRHSCEEIFIVLKGSGTLYLASS---SHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNT 138 (191)
Q Consensus 64 ~~~~~~~~~~i~PG~~~--~~H~H~~eE~~~Vl~G~~~v~i~~~---~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~ 138 (191)
.++|.+....+...... +.|+|..-|++||++|++. .++++ . +.+.+||.+++|+|..|.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~----------~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 4 KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVS----------YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp CTTEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EEETTTTEE----------EEECTTEEEEECTTCEEEEEEE
T ss_pred chhhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EECCcccee----------EEEcCCCEEEEcCCCceeeccc
Confidence 34566677777776543 6799999999999999999 99988 7 4778999999999999999876
Q ss_pred --CCCCcEEEEEEE
Q 029565 139 --NENEDLQMLVVI 150 (191)
Q Consensus 139 --g~~e~~~~l~v~ 150 (191)
++ ++...+++.
T Consensus 73 ~~~~-~~~~~~~i~ 85 (276)
T 3gbg_A 73 SLSD-ENINVSVIT 85 (276)
T ss_dssp ECCS-SCEEEEEEE
T ss_pred cCCC-cceEEEEEE
Confidence 43 356666554
No 124
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.74 E-value=0.00034 Score=54.72 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=59.5
Q ss_pred EEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECC-eeeecCCCCCceeeec---CCeEEEECCCCcEEEEeCCCCCcE
Q 029565 70 WLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLAS-SSHEKHPGKPQEHFFF---ANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~-~~~~l~~gk~~d~~l~---~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
......+|...+.|.|. ..++++|++|++...+.+ ..-.-.-|+...+.|. ..-.++||+|.+|.+.|.++ +++
T Consensus 56 n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd-~~a 134 (174)
T 3ejk_A 56 YFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD-TPA 134 (174)
T ss_dssp EEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT-SCE
T ss_pred EEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC-CCE
Confidence 33445788878899998 889999999999987633 2211112334456777 56789999999999999998 467
Q ss_pred EEEEEEe
Q 029565 145 QMLVVIS 151 (191)
Q Consensus 145 ~~l~v~~ 151 (191)
.++...+
T Consensus 135 v~ly~~s 141 (174)
T 3ejk_A 135 LVANCTD 141 (174)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 7777654
No 125
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=97.57 E-value=8.5e-05 Score=50.83 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=34.6
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYL 102 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i 102 (191)
++++.+..+.||+..++|+|+ ..|++||++|++.+.+
T Consensus 35 gls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 35 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp TEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEE
T ss_pred CcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEE
Confidence 679999999999999999999 7899999999999875
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.51 E-value=0.00067 Score=55.61 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=51.8
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCC
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
.+....+...||...+. .|..+|+.|||+|+++++.++.. .+.+++||+++||+|..=.+.....
T Consensus 166 ~~~~GiW~~tpG~~~~~-~~~~~E~~~ILeG~v~lt~~~G~---------~~~~~aGD~~~~P~G~~~tWev~e~ 230 (238)
T 3myx_A 166 TLRIGVWDSTPYERISR-PHKIHELMNLIEGRVVLSLENGS---------SLTVNTGDTVFVAQGAPCKWTSTGY 230 (238)
T ss_dssp SCEEEEEEECCEEBCCE-ECSSCEEEEEEECCEEEEETTSC---------EEEECTTCEEEECTTCEEEEEESSC
T ss_pred CEEEeEEEeCCCEEECC-cCCCCEEEEEEEeEEEEEeCCCC---------EEEECCCCEEEECCCCEEEEEECcc
Confidence 57778888999885443 34578999999999999986533 2588999999999999988877643
No 127
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.45 E-value=0.0013 Score=54.45 Aligned_cols=72 Identities=10% Similarity=0.110 Sum_probs=57.3
Q ss_pred EEEEEECCCCcCCceecCCcE-EEEEEeCEEEEEEC-CeeeecCCCCCceeeecCCeEEEECC--CCcEEEEeCCCCCcE
Q 029565 69 VWLQTFSPGTRTPIHRHSCEE-IFIVLKGSGTLYLA-SSSHEKHPGKPQEHFFFANSTFHIPV--NDAHQVWNTNENEDL 144 (191)
Q Consensus 69 ~~~~~i~PG~~~~~H~H~~eE-~~~Vl~G~~~v~i~-~~~~~l~~gk~~d~~l~~GD~v~ip~--g~~H~~~N~g~~e~~ 144 (191)
+-..++.||...++|.|...| +.||++|+++-.-. |.. ..+.+||+-+..+ |+.|+-.|.++++++
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~----------~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l 135 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNH----------VQASAGEALLLSTQPGVSYSEHNLSKDKPL 135 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCE----------EEEETTEEEEECCCTTCCEEEEECCSSSCE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEEeCCCCE----------EEECCCeEEEEECCCCeEEEEEECCCCceE
Confidence 455678999999999999655 89999999998754 332 3789999999955 579999997654588
Q ss_pred EEEEEE
Q 029565 145 QMLVVI 150 (191)
Q Consensus 145 ~~l~v~ 150 (191)
.++-+.
T Consensus 136 ~~lQlW 141 (256)
T 2vec_A 136 TRMQLW 141 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887776
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.30 E-value=0.00077 Score=54.60 Aligned_cols=64 Identities=17% Similarity=0.251 Sum_probs=50.4
Q ss_pred EEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEE
Q 029565 68 EVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQML 147 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l 147 (191)
.+.+..++||...+.|.|.++|+ +||+|+.. .+++ .+.+|+.+..|++..|...+ ++ +.+.++
T Consensus 147 ~v~l~r~~~G~~~~~~~hgG~Ei-lVL~G~~~--d~~~------------~~~~GsWlR~P~gs~h~~~a-g~-~g~~i~ 209 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE------------VLGRNAWLRLPEGEALSATA-GA-RGAKIW 209 (223)
T ss_dssp EEEEEEECTTCEEEECCSSCEEE-EEEEEEEE--ETTE------------EECTTEEEEECTTCCEEEEE-EE-EEEEEE
T ss_pred EEEEEEECCCCccCCCCCCcEEE-EEEEeEEE--ECCc------------eECCCeEEEeCCCCccCcEE-CC-CCeEEE
Confidence 45678899999999999977775 99999964 4444 56799999999999999988 44 356544
Q ss_pred E
Q 029565 148 V 148 (191)
Q Consensus 148 ~ 148 (191)
+
T Consensus 210 ~ 210 (223)
T 3o14_A 210 M 210 (223)
T ss_dssp E
T ss_pred E
Confidence 4
No 129
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.21 E-value=0.0031 Score=51.63 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=58.5
Q ss_pred EEEEEECCCCcCCceecCC-cEEEEEEeCEEEEEEC-CeeeecCCCCCceeeecCCeEEEEC--CCCcEEEEeCCCCCcE
Q 029565 69 VWLQTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYLA-SSSHEKHPGKPQEHFFFANSTFHIP--VNDAHQVWNTNENEDL 144 (191)
Q Consensus 69 ~~~~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i~-~~~~~l~~gk~~d~~l~~GD~v~ip--~g~~H~~~N~g~~e~~ 144 (191)
+-..++.||...+.|.|.. +.+-||++|+++-.-. |.. -.+++||+-+.. .|+.|+-.|..+++++
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~----------~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l 112 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNK----------EQVPAGEFQIMSAGTGIRHSEYNPSSTERL 112 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEEESSSCE----------EEEETTCEEEEECTTCEEEEEECCCSSCCE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEEeCCCCc----------EEECCCcEEEEECCCCcEEEEEcCCCCCeE
Confidence 3356689999999999995 5599999999998754 332 378999999995 5589999997643588
Q ss_pred EEEEEEeCCC
Q 029565 145 QMLVVISRPP 154 (191)
Q Consensus 145 ~~l~v~~~p~ 154 (191)
.++-+.-.|.
T Consensus 113 ~~lQlWv~P~ 122 (242)
T 1tq5_A 113 HLYQIWIMPE 122 (242)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEEcch
Confidence 8887765443
No 130
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.20 E-value=0.0018 Score=51.57 Aligned_cols=81 Identities=9% Similarity=0.076 Sum_probs=59.7
Q ss_pred EEEEEEECCCCcCCceecCCcEEEEEEe-CEE-EEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 68 EVWLQTFSPGTRTPIHRHSCEEIFIVLK-GSG-TLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~~eE~~~Vl~-G~~-~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
+.....-.+|.-.+.|.|...++++|++ |++ .+.+|.. -.-.-|+...+.|..+..++||+|..|.+.+.++ ++.
T Consensus 61 Q~n~S~s~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR-~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd--~a~ 137 (197)
T 1nxm_A 61 QNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLR-EGETFGNTYQTVIDASKSIFVPRGVANGFQVLSD--FVA 137 (197)
T ss_dssp EEEEEEEETTBEEEEEECSSCEEEEECSSCCEEEEEEECB-SSTTTTCEEEEEECTTEEEEECTTEEEEEEECSS--EEE
T ss_pred EEEEEECCCCCcceeeecccceEEEEcCCCEEEEEEEECC-CCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccC--CeE
Confidence 4444444677777899999999999999 995 6666654 1112244445788889999999999999999987 466
Q ss_pred EEEEEe
Q 029565 146 MLVVIS 151 (191)
Q Consensus 146 ~l~v~~ 151 (191)
++...+
T Consensus 138 ~~y~~s 143 (197)
T 1nxm_A 138 YSYLVN 143 (197)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 666554
No 131
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=97.03 E-value=0.0045 Score=49.20 Aligned_cols=82 Identities=15% Similarity=0.129 Sum_probs=56.8
Q ss_pred EEEEEEECCCCcCCceecC----CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCC
Q 029565 68 EVWLQTFSPGTRTPIHRHS----CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~----~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~ 140 (191)
+.....-.+|...+.|.|. ..++++|++|++ .+.+|...-.-.-|+...+.|.+ +..++||+|..|.+.|.++
T Consensus 66 Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd 145 (196)
T 1wlt_A 66 QTNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED 145 (196)
T ss_dssp EEEEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS
T ss_pred EEEEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 3343444567777889886 578999999999 66666543212224444566665 6889999999999999987
Q ss_pred CCcEEEEEEEe
Q 029565 141 NEDLQMLVVIS 151 (191)
Q Consensus 141 ~e~~~~l~v~~ 151 (191)
++.++...+
T Consensus 146 --~a~~ly~~s 154 (196)
T 1wlt_A 146 --SIVIYFITH 154 (196)
T ss_dssp --EEEEEEEES
T ss_pred --CeEEEEEeC
Confidence 455555443
No 132
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.02 E-value=0.0043 Score=48.85 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=53.1
Q ss_pred CCCCcCCceec--C-CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCCCcEEEEE
Q 029565 75 SPGTRTPIHRH--S-CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNENEDLQMLV 148 (191)
Q Consensus 75 ~PG~~~~~H~H--~-~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~e~~~~l~ 148 (191)
.+|.-.+.|.| . ..++++|++|++ .+.+|...-.-.-|+...+.|.+ +..++||+|..|.+.|.++ ++.++.
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd--~a~~~y 133 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSD--ECIVNY 133 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS--EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC--CeEEEE
Confidence 46777789999 4 889999999996 55555432111113444466655 5789999999999999987 366666
Q ss_pred EEe
Q 029565 149 VIS 151 (191)
Q Consensus 149 v~~ 151 (191)
..+
T Consensus 134 ~~s 136 (185)
T 1ep0_A 134 KCT 136 (185)
T ss_dssp EES
T ss_pred ecC
Confidence 543
No 133
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.99 E-value=0.005 Score=48.44 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=53.5
Q ss_pred CCCCcCCceec--C-CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCCCcEEEEE
Q 029565 75 SPGTRTPIHRH--S-CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNENEDLQMLV 148 (191)
Q Consensus 75 ~PG~~~~~H~H--~-~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~e~~~~l~ 148 (191)
.+|.-.+.|.| . ..++++|++|++ .+.+|...-.-.-|+...+.|.+ +..++||+|..|.+.|.++ ++.++.
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd--~a~~~y 134 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSE--YAEFLY 134 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS--EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCC--CEEEEE
Confidence 47777789999 4 789999999996 56665543111123444456665 5789999999999999987 366666
Q ss_pred EEe
Q 029565 149 VIS 151 (191)
Q Consensus 149 v~~ 151 (191)
..+
T Consensus 135 ~~s 137 (184)
T 2ixk_A 135 KTT 137 (184)
T ss_dssp EES
T ss_pred eCC
Confidence 544
No 134
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.94 E-value=0.0067 Score=47.16 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=65.7
Q ss_pred cCCCCcEEEEEEee-ccCCc-eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEE-EEEE---CCeeeecCCCCCceeee
Q 029565 46 YGREGLAHITVAGS-ILHGM-KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSG-TLYL---ASSSHEKHPGKPQEHFF 119 (191)
Q Consensus 46 ~~~~G~~~~~~~~~-~~~g~-~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~-~v~i---~~~~~~l~~gk~~d~~l 119 (191)
...+|..+.+.++. ...+. .........+.+|..+.+|+...+|+++...|.. ++.+ +++...+.=| -.+
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG----~dv 101 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLG----LDL 101 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEES----SCT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeC----CCc
Confidence 44456555555542 11121 1234556668889877788888999999999986 7766 4432111101 135
Q ss_pred cCCeE--EEECCCCcEEEEeCCCCCcEEEEEEEeCCCc
Q 029565 120 FANST--FHIPVNDAHQVWNTNENEDLQMLVVISRPPV 155 (191)
Q Consensus 120 ~~GD~--v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~ 155 (191)
..|+. ++||+|.++..++... +-+-+.|+++ |.+
T Consensus 102 ~~Ge~pQ~vVP~G~wqaa~~~~g-~~~LV~C~Va-PGF 137 (170)
T 1yud_A 102 AAGERPQFLVPKGCIFGSAMNQD-GFSLVGCMVS-PGF 137 (170)
T ss_dssp TTTEESCEEECTTCEEEEEESSS-SEEEEEEEES-SCC
T ss_pred ccCceeEEEECCCCEEEEEECCC-CcEEEEEEEC-CCc
Confidence 67888 9999999999999833 3555666654 443
No 135
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.91 E-value=0.0064 Score=48.66 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=52.0
Q ss_pred CCCCcCCceecC----CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCCCcEEEE
Q 029565 75 SPGTRTPIHRHS----CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNENEDLQML 147 (191)
Q Consensus 75 ~PG~~~~~H~H~----~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~e~~~~l 147 (191)
.+|.-.+.|.|. ..++++|++|++ .+.+|...-.-.-|+...+.|.+ +-.++||+|..|.+.|.++ ++.++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd--~a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVP--HTIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS--SEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCC--CEEEE
Confidence 678878899884 689999999995 45555332111123334466765 6899999999999999997 35555
Q ss_pred EEE
Q 029565 148 VVI 150 (191)
Q Consensus 148 ~v~ 150 (191)
...
T Consensus 156 Y~~ 158 (205)
T 3ryk_A 156 YKV 158 (205)
T ss_dssp EEE
T ss_pred EEc
Confidence 544
No 136
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.89 E-value=0.0067 Score=47.66 Aligned_cols=74 Identities=14% Similarity=0.052 Sum_probs=51.7
Q ss_pred CCCCcCCceec----CCcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCCCcEEEE
Q 029565 75 SPGTRTPIHRH----SCEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNENEDLQML 147 (191)
Q Consensus 75 ~PG~~~~~H~H----~~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~e~~~~l 147 (191)
.+|.-.+.|.| ...++++|++|++ .+.+|...-.-.-|+...+.|.+ +..++||+|..|.+.|.++ ++.++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd--~a~~~ 132 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE--YAEFL 132 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS--EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC--CeEEE
Confidence 46777788988 4688999999996 56665432111123334456665 4789999999999999987 35555
Q ss_pred EEE
Q 029565 148 VVI 150 (191)
Q Consensus 148 ~v~ 150 (191)
...
T Consensus 133 y~~ 135 (183)
T 1dzr_A 133 YKA 135 (183)
T ss_dssp EEE
T ss_pred EEc
Confidence 544
No 137
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.88 E-value=0.012 Score=47.02 Aligned_cols=81 Identities=14% Similarity=0.128 Sum_probs=56.2
Q ss_pred EEEEEECCCCcCCceecC----CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCC
Q 029565 69 VWLQTFSPGTRTPIHRHS----CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNEN 141 (191)
Q Consensus 69 ~~~~~i~PG~~~~~H~H~----~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~ 141 (191)
.....-.+|.--+.|.|. ..++++|++|++ .+.+|...-.-.-|+...+.|.+ +..++||+|..|.+.|.++
T Consensus 49 ~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd- 127 (205)
T 1oi6_A 49 TIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALED- 127 (205)
T ss_dssp EEEEEECTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECST-
T ss_pred EEEEeCCCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccC-
Confidence 333334577777889885 589999999996 66777653222224444566665 4789999999999999998
Q ss_pred CcEEEEEEEe
Q 029565 142 EDLQMLVVIS 151 (191)
Q Consensus 142 e~~~~l~v~~ 151 (191)
++.++...+
T Consensus 128 -~a~~~y~~s 136 (205)
T 1oi6_A 128 -DTVMSYMLS 136 (205)
T ss_dssp -TEEEEEEES
T ss_pred -CeEEEEecC
Confidence 355555443
No 138
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.82 E-value=0.015 Score=47.14 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=55.2
Q ss_pred EEEECCCCcCCceecC----CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCCCc
Q 029565 71 LQTFSPGTRTPIHRHS----CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNENED 143 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~----~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~e~ 143 (191)
...-.+|.--+.|.|. ..++++|++|++ .+.+|...-.-.-|+...+.|.+ +..++||+|..|.+.|.+++
T Consensus 70 ~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-- 147 (225)
T 1upi_A 70 CSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-- 147 (225)
T ss_dssp EEEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS--
T ss_pred EEeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC--
Confidence 3334577777889885 589999999996 67777653222234444566665 47899999999999999983
Q ss_pred EEEEEEE
Q 029565 144 LQMLVVI 150 (191)
Q Consensus 144 ~~~l~v~ 150 (191)
+.++...
T Consensus 148 a~vly~~ 154 (225)
T 1upi_A 148 STVMYLC 154 (225)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 5555544
No 139
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.79 E-value=0.0056 Score=51.15 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=49.6
Q ss_pred ECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 74 FSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 74 i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
+.+|.+...-.- .+-++++|+|+..++++++. +.|.+||++.||++..|.+.-..+ ...|.|.-.|
T Consensus 214 ~G~Ges~~~~~~-~d~wiWqLEGss~Vt~~~q~----------~~L~~~DsLLIpa~~~y~~~r~~g---sv~L~I~~~p 279 (286)
T 2qnk_A 214 YGQGSSEGLRQN-VDVWLWQLEGSSVVTMGGRR----------LSLAPDDSLLVLAGTSYAWERTQG---SVALSVTQDP 279 (286)
T ss_dssp ECSEEEEECCCS-SCEEEEEEESCEEEEETTEE----------EEECTTEEEEECTTCCEEEEECTT---CEEEEEEECG
T ss_pred EcCCccccccCc-CcEEEEEEcCceEEEECCeE----------EeccCCCEEEecCCCeEEEEecCC---eEEEEEEECc
Confidence 666654322211 27899999999999999997 477899999999999999987544 5666665433
No 140
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.76 E-value=0.01 Score=47.78 Aligned_cols=74 Identities=8% Similarity=0.015 Sum_probs=52.9
Q ss_pred CCCCcCCceecC----CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecCC--eEEEECCCCcEEEEeCCCCCcEEEE
Q 029565 75 SPGTRTPIHRHS----CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFAN--STFHIPVNDAHQVWNTNENEDLQML 147 (191)
Q Consensus 75 ~PG~~~~~H~H~----~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~G--D~v~ip~g~~H~~~N~g~~e~~~~l 147 (191)
.+|.-...|.|. ..++++|++|++ .+.+|...-.-.-|+...+.|.+. ..++||+|..|.+.|.++ ++.++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd--~a~~l 140 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISD--EATLC 140 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS--EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCC--CeEEE
Confidence 467777889886 589999999996 566665432222244445666654 789999999999999997 35555
Q ss_pred EEE
Q 029565 148 VVI 150 (191)
Q Consensus 148 ~v~ 150 (191)
...
T Consensus 141 y~~ 143 (216)
T 2c0z_A 141 YLS 143 (216)
T ss_dssp EEE
T ss_pred Eec
Confidence 544
No 141
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.41 E-value=0.014 Score=45.94 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=46.7
Q ss_pred CCCCcCCceecCCcEEEEEEeCEEEEEECCee--eecC---------------------------CCCCceeeecCCeEE
Q 029565 75 SPGTRTPIHRHSCEEIFIVLKGSGTLYLASSS--HEKH---------------------------PGKPQEHFFFANSTF 125 (191)
Q Consensus 75 ~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~--~~l~---------------------------~gk~~d~~l~~GD~v 125 (191)
++|..++.|....+-++.++.|+=++.+-.-. ..+. .-+..++.+.|||++
T Consensus 132 ~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~L 211 (235)
T 4gjz_A 132 PQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEIL 211 (235)
T ss_dssp CTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEE
T ss_pred CCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEE
Confidence 44556677877777888899999998762210 0000 001235789999999
Q ss_pred EECCCCcEEEEeCCC
Q 029565 126 HIPVNDAHQVWNTNE 140 (191)
Q Consensus 126 ~ip~g~~H~~~N~g~ 140 (191)
|||+|-+|+++|.+.
T Consensus 212 yiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 212 FIPVKYWHYVRALDL 226 (235)
T ss_dssp EECTTCEEEEEESSS
T ss_pred EeCCCCcEEEEECCC
Confidence 999999999999865
No 142
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.35 E-value=0.026 Score=48.19 Aligned_cols=68 Identities=12% Similarity=0.112 Sum_probs=50.7
Q ss_pred EECC-CCcCCceecCCcEEEEEEeCEEEEEEC-Cee--eecCC--------------------------CCCceeeecCC
Q 029565 73 TFSP-GTRTPIHRHSCEEIFIVLKGSGTLYLA-SSS--HEKHP--------------------------GKPQEHFFFAN 122 (191)
Q Consensus 73 ~i~P-G~~~~~H~H~~eE~~~Vl~G~~~v~i~-~~~--~~l~~--------------------------gk~~d~~l~~G 122 (191)
-+.| |+.+++|....+-++..+.|+=++.+. ... ..+.. ....++.+.||
T Consensus 146 ~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pG 225 (342)
T 1vrb_A 146 YAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPG 225 (342)
T ss_dssp EEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTT
T ss_pred EEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCC
Confidence 3444 778899998888888899999888766 211 00100 12357899999
Q ss_pred eEEEECCCCcEEEEeCCC
Q 029565 123 STFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 123 D~v~ip~g~~H~~~N~g~ 140 (191)
|++|+|+|-+|..++.++
T Consensus 226 D~LyiP~gwwH~v~s~~~ 243 (342)
T 1vrb_A 226 TMLYLPRGLWHSTKSDQA 243 (342)
T ss_dssp CEEEECTTCEEEEECSSC
T ss_pred cEEEeCCCccEEEEECCC
Confidence 999999999999999854
No 143
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.96 E-value=0.055 Score=42.90 Aligned_cols=77 Identities=14% Similarity=0.226 Sum_probs=56.2
Q ss_pred EEEEEEECCCCcCCceecCC-c----EEEEEEeC-EEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCC
Q 029565 68 EVWLQTFSPGTRTPIHRHSC-E----EIFIVLKG-SGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNEN 141 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~~-e----E~~~Vl~G-~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~ 141 (191)
.+....+.||+.+++|..+. . .+..+.-. ...+.++++. +.+.+|..+++.....|..+|.++
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~~~----------~~w~eGe~~~fDds~~Hev~N~~d- 171 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANET----------KTWEEGKVLIFDDSFEHEVWQDAS- 171 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEETTEE----------ECCCBTCEEEECTTSCEEEEECSS-
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECCEE----------EEeeCCcEEEEcCCeEEEEEECCC-
Confidence 57788899999999998883 2 23334433 5778899987 478899999999999999999998
Q ss_pred CcEEEEEE-EeCCCc
Q 029565 142 EDLQMLVV-ISRPPV 155 (191)
Q Consensus 142 e~~~~l~v-~~~p~~ 155 (191)
++=.+|.+ +-.|.+
T Consensus 172 ~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 172 SFRLIFIVDVWHPEL 186 (197)
T ss_dssp SCEEEEEEEEECTTS
T ss_pred CCEEEEEEeeeCCCC
Confidence 34333333 234443
No 144
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=95.95 E-value=0.035 Score=41.08 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=48.0
Q ss_pred CCCcCCce---e-cC-CcEEEEEEeCEEEEE-ECCeee-ecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEE-E
Q 029565 76 PGTRTPIH---R-HS-CEEIFIVLKGSGTLY-LASSSH-EKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQM-L 147 (191)
Q Consensus 76 PG~~~~~H---~-H~-~eE~~~Vl~G~~~v~-i~~~~~-~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~-l 147 (191)
|++-...| . |. ..+.+.|++|++++. ++++.- .. .+.....+|+..++||+.+|++.-.++ ++++ +
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~----~~~~l~~~~~~~~i~Pq~wH~Ve~lsd--d~~f~l 96 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEP----DQVILIEAGQFAVFPPEKWHNIEAMTD--DTYFNI 96 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSC----SEEEEEEBTBEEECCSSCEEEEEESST--TCEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcce----eEEEEeCCCCceEECCCCcEEEEEcCC--CEEEEE
Confidence 45555667 3 66 568999999999997 444210 00 123567899999999999999998776 4565 4
Q ss_pred EEE
Q 029565 148 VVI 150 (191)
Q Consensus 148 ~v~ 150 (191)
..+
T Consensus 97 eFy 99 (127)
T 3bb6_A 97 DFF 99 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.93 E-value=0.11 Score=41.30 Aligned_cols=75 Identities=11% Similarity=0.115 Sum_probs=52.7
Q ss_pred ECCCCcCCceecC----CcEEEEEEeCEE-EEEECCeeeecCCCCCceeeecC--CeEEEECCCCcEEEEeCCCCCcEEE
Q 029565 74 FSPGTRTPIHRHS----CEEIFIVLKGSG-TLYLASSSHEKHPGKPQEHFFFA--NSTFHIPVNDAHQVWNTNENEDLQM 146 (191)
Q Consensus 74 i~PG~~~~~H~H~----~eE~~~Vl~G~~-~v~i~~~~~~l~~gk~~d~~l~~--GD~v~ip~g~~H~~~N~g~~e~~~~ 146 (191)
-.+|.--++|.|. ..+++.|++|++ .+.+|-..-.-.-|+...+.|.+ +-.++||+|..|.+.+.++ ++.+
T Consensus 51 S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd--~a~~ 128 (201)
T 4hn1_A 51 SHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTD--DATL 128 (201)
T ss_dssp ECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECST--TEEE
T ss_pred cCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCC--CeEE
Confidence 3577777889874 688999999995 45666543222224444466665 6789999999999999987 3555
Q ss_pred EEEE
Q 029565 147 LVVI 150 (191)
Q Consensus 147 l~v~ 150 (191)
+...
T Consensus 129 ~Y~~ 132 (201)
T 4hn1_A 129 VFLC 132 (201)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 5444
No 146
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=95.54 E-value=0.14 Score=42.57 Aligned_cols=115 Identities=16% Similarity=0.121 Sum_probs=67.4
Q ss_pred ccCCCeeEecCCCCCCccCCCCcEEEEEEe--eccCCceeEEEEEEEECCCC---cCCceecCCc---------EEEEE-
Q 029565 29 IKGFPLVRNISELPQDNYGREGLAHITVAG--SILHGMKEIEVWLQTFSPGT---RTPIHRHSCE---------EIFIV- 93 (191)
Q Consensus 29 ~~~~~~V~~i~d~~~~~~~~~G~~~~~~~~--~~~~g~~~~~~~~~~i~PG~---~~~~H~H~~e---------E~~~V- 93 (191)
+.-.+.....+++....++. |...+.+.. .......++.+..+ +.||+ +.|+|.|..+ |++|.
T Consensus 114 ~~~p~r~i~~~d~~~~~rG~-g~n~R~V~~i~~~~~~a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~ 191 (270)
T 2qjv_A 114 GELPVRLISPQEVGVEHRGX-GRNQRLVHNILPDSQLADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHR 191 (270)
T ss_dssp SCCCCEEECGGGSEEEEESS-GGGCEEEEEEECTTSCCSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEE
T ss_pred CcCCcEEECHHHCCeEeccC-ccchhhhhhhcCCCCCcceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEE
Confidence 33344445555665555542 322232211 11233346666666 66665 4589999963 87755
Q ss_pred Ee---CEEEEEE--CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 94 LK---GSGTLYL--ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 94 l~---G~~~v~i--~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
+. |.+--.+ ++...+ +.+.+.-||++.+|+|- |....... -.+.+|++...+
T Consensus 192 ~~~~~gf~~q~vyt~d~~~d------e~~~V~~~d~VlvP~Gy-Hp~~a~pG-y~~YylwvMaG~ 248 (270)
T 2qjv_A 192 FNPPQGFCLQRVYTDDRSLD------ECMAVYNRDVVXVPXGY-HPVATIAG-YDNYYLNVMAGP 248 (270)
T ss_dssp EESTTCEEEEEEECTTSSSE------EEEEEETTCEEEESSSB-CCEEECTT-CEEEEEEEEECS
T ss_pred CCCCCCEEEEEEeCCCCCCc------eEEEEECCCEEecCCCc-CCCcCCCC-cccEEEEEEECC
Confidence 43 5555555 111100 02588899999999999 98665544 268899999765
No 147
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=94.84 E-value=0.16 Score=44.96 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=52.1
Q ss_pred eeEEEEEEEEC--CCCcCCceecCCcEEEEEEeCEEEEEECCe-eeecCCCCCceeeecCCeEEEECCCCcEEEEeCC--
Q 029565 65 KEIEVWLQTFS--PGTRTPIHRHSCEEIFIVLKGSGTLYLASS-SHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTN-- 139 (191)
Q Consensus 65 ~~~~~~~~~i~--PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~-~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g-- 139 (191)
..|.+.++++. +|.....-.+..-.+++|++|++++..++. .. ...+++||++++|++..-.+.+.+
T Consensus 355 ~eF~v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~~~~~~~--------~~~l~~G~~~fvpa~~~~~i~g~~~~ 426 (440)
T 1pmi_A 355 AEFSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQITGDDST--------KQKIDTGYVFFVAPGSSIELTADSAN 426 (440)
T ss_dssp SSCEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEETTCGGG--------CEEEETTCEEEECTTCCEEEEECSSC
T ss_pred CeEEEEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEeCCcccc--------eEEeccCCEEEEeCCCcEEEEEeccc
Confidence 36888888887 342222223456789999999999998764 10 036889999999999777777752
Q ss_pred -CCCcEEEEEE
Q 029565 140 -ENEDLQMLVV 149 (191)
Q Consensus 140 -~~e~~~~l~v 149 (191)
. +.++++..
T Consensus 427 ~~-~~~~~~~a 436 (440)
T 1pmi_A 427 QD-QDFTTYRA 436 (440)
T ss_dssp CS-SCCEEEEE
T ss_pred CC-CcEEEEEE
Confidence 3 34555543
No 148
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=94.69 E-value=0.091 Score=44.86 Aligned_cols=66 Identities=18% Similarity=0.150 Sum_probs=48.3
Q ss_pred CCCCcCCceecCCcEEEEEEeCEEEEEECCeee-------------------ecC-----------CCCCceeeecCCeE
Q 029565 75 SPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSH-------------------EKH-----------PGKPQEHFFFANST 124 (191)
Q Consensus 75 ~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~-------------------~l~-----------~gk~~d~~l~~GD~ 124 (191)
++|..++.|..+.+-++.++.|+=++.+-.... .+. .-+..++.+.|||+
T Consensus 191 ~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~ 270 (349)
T 3d8c_A 191 MEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDV 270 (349)
T ss_dssp CTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCE
T ss_pred CCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCE
Confidence 456677889888878888899998877532110 000 00235689999999
Q ss_pred EEECCCCcEEEEeCCC
Q 029565 125 FHIPVNDAHQVWNTNE 140 (191)
Q Consensus 125 v~ip~g~~H~~~N~g~ 140 (191)
+|+|+|-+|.++|.++
T Consensus 271 LyiP~gWwH~V~~l~d 286 (349)
T 3d8c_A 271 LYIPMYWWHHIESLLN 286 (349)
T ss_dssp EEECTTCEEEEEECTT
T ss_pred EEECCCCcEEEEEcCC
Confidence 9999999999999874
No 149
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.61 E-value=0.3 Score=40.44 Aligned_cols=68 Identities=10% Similarity=0.060 Sum_probs=54.0
Q ss_pred EECCCCcCCceecCCcE-EEEEEeCEEEEEEC-CeeeecCCCCCceeeecCCeEEEECCC--CcEEEEeCCCCCcEEEEE
Q 029565 73 TFSPGTRTPIHRHSCEE-IFIVLKGSGTLYLA-SSSHEKHPGKPQEHFFFANSTFHIPVN--DAHQVWNTNENEDLQMLV 148 (191)
Q Consensus 73 ~i~PG~~~~~H~H~~eE-~~~Vl~G~~~v~i~-~~~~~l~~gk~~d~~l~~GD~v~ip~g--~~H~~~N~g~~e~~~~l~ 148 (191)
.+.++...+.|.|..-| +-||++|+++-.-. |.. -.+.+||+=+..+| +.|+=.|..+ +++..+-
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~----------~~i~~GdvQwMtAG~GI~HsE~~~~~-~~~~~lQ 113 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHFDSKAGH----------STLGPGDVQWMTAGRGVVHKEDPASG-STVHSLQ 113 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEEETTTEE----------EEECTTCEEEEECTTCEEEEEEECTT-CCEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCc----------eEECCCeEEEEeCCCCEEEEeecCCC-CCEEEEE
Confidence 66788889999999655 89999999998743 332 37889999888865 6899999876 5888887
Q ss_pred EEe
Q 029565 149 VIS 151 (191)
Q Consensus 149 v~~ 151 (191)
+.-
T Consensus 114 lWv 116 (277)
T 2p17_A 114 LWV 116 (277)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 150
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.59 E-value=0.25 Score=40.93 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=58.0
Q ss_pred cCCceeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecC---CeEEEECCCCcEEEEe
Q 029565 61 LHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFA---NSTFHIPVNDAHQVWN 137 (191)
Q Consensus 61 ~~g~~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~---GD~v~ip~g~~H~~~N 137 (191)
..+..-+.+....|++|.......-..|-.++.+.|++++.++++++.+-.+ .. .+.. .|++|+|.|..-.+..
T Consensus 23 ~a~~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~-R~--svF~~~~p~~lYvp~g~~v~i~a 99 (270)
T 2qjv_A 23 NAGWEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAADSFFYRIGQ-RM--SPFERIPAYSVYLPHHTEAXVTA 99 (270)
T ss_dssp HHTSSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTEEEEEECC-CS--SGGGCSCCCEEEECSSCCEEEEE
T ss_pred CCCcEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCEEEecccc-cc--ccccCCCCcEEEECCCCEEEEEe
Confidence 3444446788889999987665544444467778999999999998644211 11 1222 4899999999777776
Q ss_pred CCCCCcEEEEEEEe
Q 029565 138 TNENEDLQMLVVIS 151 (191)
Q Consensus 138 ~g~~e~~~~l~v~~ 151 (191)
.+ ++++.+..+
T Consensus 100 ~~---~~~~~v~sA 110 (270)
T 2qjv_A 100 ET---DLELAVCSA 110 (270)
T ss_dssp SS---SEEEEEEEE
T ss_pred cC---CceEEEEee
Confidence 54 477777654
No 151
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.45 E-value=0.074 Score=44.60 Aligned_cols=85 Identities=6% Similarity=-0.164 Sum_probs=57.2
Q ss_pred EEEEEEECCCCcCCceecC-C-c---------EEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEE
Q 029565 68 EVWLQTFSPGTRTPIHRHS-C-E---------EIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~-~-e---------E~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~ 136 (191)
...+..++||+.+.+|+-+ . . .+-++..-...+.++|+. +.+++|...++....+|+..
T Consensus 92 ~~vRlrL~PG~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~----------~~m~~GE~w~~d~~~~H~v~ 161 (290)
T 1e5r_A 92 QMARSRNLKNAIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTV----------IHMRPGEIWFLDAATVHSAV 161 (290)
T ss_dssp EEEEEEEEESEEEEEECCC--------CBCCEEEECSCCTTEEEEETTEE----------ECCCTTEEEECCTTSCEEEE
T ss_pred heEEEEeCCCCEeeCccCccccccccCCceEEEeeEecCCCcEEEECCEE----------EecCCCCEEEEcCCCeeEEE
Confidence 4455599999999888766 2 1 133334555667788876 57789999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCceeeecCCCCCccc
Q 029565 137 NTNENEDLQMLVVISRPPVKVFIYEDWSMPHT 168 (191)
Q Consensus 137 N~g~~e~~~~l~v~~~p~~~~~~~~~w~~~~~ 168 (191)
|.|+. .++.-++.... ...+|+....
T Consensus 162 N~g~~--~RIhLv~D~~~----~~~~wl~~lf 187 (290)
T 1e5r_A 162 NFSEI--SRQSLCVDFAF----DGPFDEKEIF 187 (290)
T ss_dssp ESSSS--CCCEEEEEEBC----SSCCCGGGGB
T ss_pred cCCCC--CeEEEEEEecc----cCCcCHHHHH
Confidence 99983 45555443211 2246775443
No 152
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.15 E-value=0.04 Score=48.96 Aligned_cols=104 Identities=20% Similarity=0.143 Sum_probs=58.7
Q ss_pred ECCCCcCCceecCCcE--EEEEEeCEEEEEECCee--------------------eecCCCCCceeeecCCeEEEECCCC
Q 029565 74 FSPGTRTPIHRHSCEE--IFIVLKGSGTLYLASSS--------------------HEKHPGKPQEHFFFANSTFHIPVND 131 (191)
Q Consensus 74 i~PG~~~~~H~H~~eE--~~~Vl~G~~~v~i~~~~--------------------~~l~~gk~~d~~l~~GD~v~ip~g~ 131 (191)
=++|+.++.|...... +..+++|+=.+.+-.-. +.....+..++.+.|||++++|+|=
T Consensus 238 G~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGW 317 (447)
T 3kv4_A 238 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 317 (447)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCC
Confidence 3455667788877443 56788888877542100 0000123345789999999999999
Q ss_pred cEEEEeCCCCCcEEEEEEEeCCCceee--ecCCCCCcccccccCccccc
Q 029565 132 AHQVWNTNENEDLQMLVVISRPPVKVF--IYEDWSMPHTAAKLKFPYFW 178 (191)
Q Consensus 132 ~H~~~N~g~~e~~~~l~v~~~p~~~~~--~~~~w~~~~~~~~~~~~~~~ 178 (191)
+|.+.|..++ -+.--...+...+... ++.-......+.+++||++.
T Consensus 318 wH~V~nleds-Iai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~ 365 (447)
T 3kv4_A 318 IHAVLTPVDC-LAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFE 365 (447)
T ss_dssp EEEEEESSCE-EEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHH
T ss_pred eEEEecCCCE-EEEccccccccCHHHHHHHHHHHHhcCCCccccccCHH
Confidence 9999998762 1111111222222210 01111124467788888774
No 153
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=93.97 E-value=2 Score=35.61 Aligned_cols=78 Identities=17% Similarity=0.062 Sum_probs=56.2
Q ss_pred EEEeeccCCceeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcE
Q 029565 55 TVAGSILHGMKEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAH 133 (191)
Q Consensus 55 ~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H 133 (191)
.+.+ ...|. +..++.++|+-..|.=.|. .-| +|||+|++. +|+. .+.+|+..++|+|+.-
T Consensus 83 lLs~-~d~Ga---STl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~--~G~~------------~l~~h~Y~f~PaGV~~ 143 (303)
T 2qdr_A 83 LLTW-HDSGA---STSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQ--LGEW------------QLNKHSYSFIPAGVRI 143 (303)
T ss_dssp EEEE-CTTSC---EEEEEEECTTCEECCBEESSCEE-EEEEESEEE--ETTE------------EECTTEEEEECTTCCB
T ss_pred eccc-CCCCc---ceEEEEecCCCCCCCcccccceE-EEEEEeEEE--eCCE------------EecCCceEEecCCCcc
Confidence 3444 34554 4567889999988876666 445 999999764 5765 5678899999999976
Q ss_pred E-EEeCCCCCcEEEEEEEeC
Q 029565 134 Q-VWNTNENEDLQMLVVISR 152 (191)
Q Consensus 134 ~-~~N~g~~e~~~~l~v~~~ 152 (191)
. +.-.|+ +++++|+..+.
T Consensus 144 ~~~kv~~~-~g~~iL~fe~g 162 (303)
T 2qdr_A 144 GSWKVLGG-EEAEILWMENG 162 (303)
T ss_dssp CCEEEETT-SCEEEEEEECS
T ss_pred CceeecCC-CCcEEEEEecC
Confidence 4 444467 58999998543
No 154
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=93.96 E-value=0.19 Score=42.57 Aligned_cols=67 Identities=21% Similarity=0.188 Sum_probs=48.3
Q ss_pred ECCCCcCCceecCCcEEEEEEeCEEEEEECCee--------------eec-------C----CCCCceeeecCCeEEEEC
Q 029565 74 FSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSS--------------HEK-------H----PGKPQEHFFFANSTFHIP 128 (191)
Q Consensus 74 i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~--------------~~l-------~----~gk~~d~~l~~GD~v~ip 128 (191)
=++|..+++|....+-++..+.|+=++.+-... ..+ . .-+..++.+.|||++|+|
T Consensus 174 g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP 253 (338)
T 3al5_A 174 SSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIP 253 (338)
T ss_dssp ECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEEC
T ss_pred CCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEEC
Confidence 455667788988887788888999887653211 000 0 012356899999999999
Q ss_pred CCCcEEEEeCCC
Q 029565 129 VNDAHQVWNTNE 140 (191)
Q Consensus 129 ~g~~H~~~N~g~ 140 (191)
+|-+|.++|.+.
T Consensus 254 ~gWwH~v~~l~~ 265 (338)
T 3al5_A 254 ALWFHNVISEEF 265 (338)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCeEEEeeCCC
Confidence 999999999865
No 155
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=93.90 E-value=0.54 Score=41.51 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=46.6
Q ss_pred CCCCc-CCceecCCcEEEEEEeCEEEEEECCeeeecC----------C-CCCceeeecCCeEEEECCCCcEEEEeCC
Q 029565 75 SPGTR-TPIHRHSCEEIFIVLKGSGTLYLASSSHEKH----------P-GKPQEHFFFANSTFHIPVNDAHQVWNTN 139 (191)
Q Consensus 75 ~PG~~-~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~----------~-gk~~d~~l~~GD~v~ip~g~~H~~~N~g 139 (191)
++|.. .++|+...+-+++.+.|+=+.++......+. . -...++.+.|||++|+|+|.+|..++.+
T Consensus 147 ~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 147 PAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp CTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred CCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 34443 3699988888888899998887643321000 0 1124679999999999999999999875
No 156
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.84 E-value=0.35 Score=33.79 Aligned_cols=63 Identities=14% Similarity=0.182 Sum_probs=47.4
Q ss_pred ECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 74 FSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 74 i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
+.||. .+... ..|.+-|++|+.++.+.|+.-. ..+.+|+++.+|+|..-.++... +..++|.+
T Consensus 30 m~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~ew--------~~~~aGesF~Vpans~F~l~v~~---~~~YlC~y 93 (94)
T 2oyz_A 30 MLPGE---YTFGTQAPERMTVVKGALVVKRVGEADW--------TTYSSGESFDVEGNSSFELQVKD---ATAYLCEY 93 (94)
T ss_dssp ECSEE---EEEEESSCEEEEEEESEEEEEETTCSSC--------EEEETTCEEEECSSEEEEEEESS---CEEEEEEC
T ss_pred EeceE---EEEcCCCeEEEEEEEeEEEEEcCCCCcC--------EEECCCCEEEECCCCEEEEEEcc---cEeEEEEc
Confidence 55654 23233 6799999999999999986311 47789999999999998888863 56777753
No 157
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=93.80 E-value=2.4 Score=37.67 Aligned_cols=70 Identities=10% Similarity=0.036 Sum_probs=50.5
Q ss_pred eEEEEEEEECCCCcC--CceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCC
Q 029565 66 EIEVWLQTFSPGTRT--PIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENE 142 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~--~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e 142 (191)
++.+... .++.+. ..-... +++++++.+|++.++.+=.. ..+++||.++||.|+.+++.-.+
T Consensus 156 G~aI~~y--~~n~sM~~~~f~NaDGD~Livpq~G~l~i~TEfG~----------L~v~pgei~VIPRGi~frv~l~~--- 220 (471)
T 1eyb_A 156 GLAIHIF--LCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGK----------MLVQPNEICVIQRGMRFSIDVFE--- 220 (471)
T ss_dssp CEEEEEE--EECSCCCSEEEEESSEEEEEEEEESCEEEEETTEE----------EEECTTEEEEECTTCCEEEECSS---
T ss_pred ceEEEEE--eCCCCcccceeecCCCCEEEEEEeCCEEEEEeccc----------EEeccCCEEEECCccEEEEeeCC---
Confidence 3444443 344443 233444 89999999999999987554 47889999999999999997654
Q ss_pred cEEEEEEE
Q 029565 143 DLQMLVVI 150 (191)
Q Consensus 143 ~~~~l~v~ 150 (191)
+++.+++-
T Consensus 221 p~Rgyi~E 228 (471)
T 1eyb_A 221 ETRGYILE 228 (471)
T ss_dssp SEEEEEEE
T ss_pred CceEEEEE
Confidence 56766653
No 158
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=93.53 E-value=1 Score=32.38 Aligned_cols=66 Identities=20% Similarity=0.356 Sum_probs=50.4
Q ss_pred EECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 73 TFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 73 ~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
.+.||.. |.+... ..|.+-|++|+.++.+.|.... ..+.+|+++.+|++..-.++.. ++..++|.+
T Consensus 43 Vm~PGe~-~YtF~T~~~E~MevvsG~l~V~Lpg~~eW--------~~~~aGesF~VpanssF~lkv~---~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTEQ-PLTFETHVPERMEIISGECRVKIADSTES--------ELFRAGQSFYVPGNSLFKIETD---EVLDYVCHL 109 (111)
T ss_dssp EECCCSS-CEEEECSSCEEEEEEESEEEEEETTCSSC--------EEEETTCEEEECTTCEEEEECS---SCEEEEEEE
T ss_pred EEecccc-ceEEcCCCcEEEEEEEeEEEEEcCCcccC--------EEeCCCCEEEECCCCcEEEEEC---cceeEEEEc
Confidence 3677742 345444 6799999999999999985421 3778999999999999888875 357788865
No 159
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=93.38 E-value=0.29 Score=40.86 Aligned_cols=70 Identities=16% Similarity=-0.036 Sum_probs=53.8
Q ss_pred EEEECCCCcCCceecCCcE-EEEEE-eCEEEEEEC-CeeeecCCCCCceeeecCCeEEEECCC--CcEEEEeCCCCCcEE
Q 029565 71 LQTFSPGTRTPIHRHSCEE-IFIVL-KGSGTLYLA-SSSHEKHPGKPQEHFFFANSTFHIPVN--DAHQVWNTNENEDLQ 145 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE-~~~Vl-~G~~~v~i~-~~~~~l~~gk~~d~~l~~GD~v~ip~g--~~H~~~N~g~~e~~~ 145 (191)
...+.|+...+.|.|..-| +-||+ +|+++-.-. |.. -.+.+||+=+.-+| +.|+=.|..+ +++.
T Consensus 44 ~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn~----------~~i~~GdvQwMtAG~GI~HsE~~~~~-~~~~ 112 (290)
T 1j1l_A 44 EFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHT----------GKMNPGDLQWMTAGRGILHAEMPCSE-EPAH 112 (290)
T ss_dssp EEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCE----------EEECTTCEEEEECTTCEEEEEEECSS-SCEE
T ss_pred ccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCCCc----------eEECCCcEEEEeCCCCEEEEeEcCCC-CCEE
Confidence 3457788888999999655 89999 999998743 222 37889999888755 6899999866 5888
Q ss_pred EEEEEe
Q 029565 146 MLVVIS 151 (191)
Q Consensus 146 ~l~v~~ 151 (191)
.+-+.-
T Consensus 113 ~lQlWv 118 (290)
T 1j1l_A 113 GLQLWV 118 (290)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887764
No 160
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.08 E-value=0.055 Score=48.53 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=46.5
Q ss_pred ECCCCcCCceecCCcE--EEEEEeCEEEEEECCee--------------------eecCCCCCceeeecCCeEEEECCCC
Q 029565 74 FSPGTRTPIHRHSCEE--IFIVLKGSGTLYLASSS--------------------HEKHPGKPQEHFFFANSTFHIPVND 131 (191)
Q Consensus 74 i~PG~~~~~H~H~~eE--~~~Vl~G~~~v~i~~~~--------------------~~l~~gk~~d~~l~~GD~v~ip~g~ 131 (191)
=++|+.++.|.+...- +..++.|+=.+.+-.-. +.....+..++.+.|||++++|+|=
T Consensus 273 G~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGW 352 (488)
T 3kv5_D 273 GVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGW 352 (488)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCc
Confidence 4556677889888544 56788888877543110 0001123446789999999999999
Q ss_pred cEEEEeCCC
Q 029565 132 AHQVWNTNE 140 (191)
Q Consensus 132 ~H~~~N~g~ 140 (191)
+|.+.|..+
T Consensus 353 wH~V~nled 361 (488)
T 3kv5_D 353 IHAVLTSQD 361 (488)
T ss_dssp EEEEEEEEE
T ss_pred eEEeeCCCC
Confidence 999999865
No 161
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=92.77 E-value=0.13 Score=45.59 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=46.8
Q ss_pred EEECCCCcCCceecCC-c-EEEEEEeCEEEEEECC-eeeec--C-----------------CCCCceeeecCCeEEEECC
Q 029565 72 QTFSPGTRTPIHRHSC-E-EIFIVLKGSGTLYLAS-SSHEK--H-----------------PGKPQEHFFFANSTFHIPV 129 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~-e-E~~~Vl~G~~~v~i~~-~~~~l--~-----------------~gk~~d~~l~~GD~v~ip~ 129 (191)
..=++|+.++.|..+. . -+..++.|+=.+.+=. ....+ + ..+..++.+.|||++|||+
T Consensus 201 ~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPs 280 (451)
T 2yu1_A 201 LMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPS 280 (451)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECT
T ss_pred EEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCC
Confidence 3456677788998883 3 4667889988776411 10000 0 0122357889999999999
Q ss_pred CCcEEEEeCCC
Q 029565 130 NDAHQVWNTNE 140 (191)
Q Consensus 130 g~~H~~~N~g~ 140 (191)
|=+|.+.|..+
T Consensus 281 GWwH~V~nled 291 (451)
T 2yu1_A 281 GWIHAVYTPTD 291 (451)
T ss_dssp TCEEEEECSSC
T ss_pred CceEEEecCCC
Confidence 99999999876
No 162
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=92.73 E-value=0.85 Score=36.98 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=51.2
Q ss_pred eEEEEEEEECCCCcCCceecCC-cEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSC-EEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~-eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
...+...+++||+......... .-++||++|++++ +++ .+.+||.+.+..+..-.+.+. +++
T Consensus 159 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v--~g~------------~l~~gd~~~~~~~~~l~l~a~---~~a 221 (242)
T 1tq5_A 159 DMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI--NGV------------KASTSDGLAIWDEQAISIHAD---SDS 221 (242)
T ss_dssp SCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEE--TTE------------EEETTCEEEEESCSCEEEEES---SSE
T ss_pred CCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEE--CCE------------EeCCCCEEEECCCCeEEEEeC---CCC
Confidence 5577788899998765443343 3479999998766 553 567999999987776677763 368
Q ss_pred EEEEEEeCC
Q 029565 145 QMLVVISRP 153 (191)
Q Consensus 145 ~~l~v~~~p 153 (191)
++|.+...+
T Consensus 222 ~~Ll~~~~~ 230 (242)
T 1tq5_A 222 EVLLFDLPP 230 (242)
T ss_dssp EEEEEEECC
T ss_pred EEEEEECCc
Confidence 888876643
No 163
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=92.46 E-value=0.23 Score=41.91 Aligned_cols=58 Identities=16% Similarity=0.187 Sum_probs=42.0
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCC-cEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVND-AHQV 135 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~-~H~~ 135 (191)
.|.+.+.++.++... ..+..-.+++|++|++++..+++. +.+.+||++++|++. .-.+
T Consensus 250 ~F~~~~~~~~~~~~~--~~~~~~~il~v~~G~~~l~~~~~~----------~~l~~G~~~~vpa~~~~~~i 308 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM--AQDESFLICSVIEGSGLLKYEDKT----------CPLKKGDHFILPAQMPDFTI 308 (319)
T ss_dssp SCEEEEEEEEEEEEE--CCCSSCEEEEEEEEEEEEEETTEE----------EEEETTCEEEECTTCCCEEE
T ss_pred EEEEEEEEECCceEE--ccCCccEEEEEEcCeEEEEECCEE----------EEEcCCcEEEEeCCCceEEE
Confidence 577777777644321 122356799999999999887664 478899999999987 3444
No 164
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=92.45 E-value=1.5 Score=39.30 Aligned_cols=67 Identities=12% Similarity=0.067 Sum_probs=46.5
Q ss_pred ECCCC-cCCceecCCcEEEEEEeCEEEEEECCeeee---cC------------CCCCceeeecCCeEEEECCCCcEEEEe
Q 029565 74 FSPGT-RTPIHRHSCEEIFIVLKGSGTLYLASSSHE---KH------------PGKPQEHFFFANSTFHIPVNDAHQVWN 137 (191)
Q Consensus 74 i~PG~-~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~---l~------------~gk~~d~~l~~GD~v~ip~g~~H~~~N 137 (191)
-++|. ..++|.-..+-+++=+.|+=...+...... +. .-...++.+.|||++|+|+|.+|..++
T Consensus 171 tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s 250 (489)
T 4diq_A 171 TPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAEC 250 (489)
T ss_dssp ECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEB
T ss_pred cCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEe
Confidence 34444 346888887777777788878877543211 00 011236899999999999999999999
Q ss_pred CCC
Q 029565 138 TNE 140 (191)
Q Consensus 138 ~g~ 140 (191)
.++
T Consensus 251 ~~~ 253 (489)
T 4diq_A 251 QDG 253 (489)
T ss_dssp CSS
T ss_pred cCC
Confidence 875
No 165
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=92.31 E-value=0.25 Score=42.99 Aligned_cols=60 Identities=8% Similarity=0.109 Sum_probs=44.7
Q ss_pred eeEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCC-cEEEE
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVND-AHQVW 136 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~-~H~~~ 136 (191)
..|.+.+.++.++.. ...+..-.+++|++|++++..+++. +.+++||++++|++. .-.+.
T Consensus 322 ~~F~v~~~~l~~~~~--~~~~~~~~il~v~~G~~~l~~~~~~----------~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 322 DDFAFSLHDLALQET--SIGQHSAAILFCVEGEAVLRKDEQR----------LVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp SSCEEEEEECCSSCE--EECCSSCEEEEEEEEEEEEEETTEE----------EEECTTCEEEECGGGCCEEEE
T ss_pred CEEEEEEEEEcCCeE--EecCCCcEEEEEEeceEEEEECCeE----------EEEccCcEEEEeCCCceEEEE
Confidence 468888888875522 1244566899999999999988764 478899999999984 44444
No 166
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=92.17 E-value=0.79 Score=38.30 Aligned_cols=70 Identities=9% Similarity=0.089 Sum_probs=46.6
Q ss_pred EEECCCCcCCceec-CCcEEE-EEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCc-EEEEeCCCCCcEEEEE
Q 029565 72 QTFSPGTRTPIHRH-SCEEIF-IVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDA-HQVWNTNENEDLQMLV 148 (191)
Q Consensus 72 ~~i~PG~~~~~H~H-~~eE~~-~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~-H~~~N~g~~e~~~~l~ 148 (191)
..|++|.......- ...|+. +.+.|.+++.++|+.+ .+..-|++|+|.|.. -.+.......++++.+
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vdg~~f----------~lg~~dalYVp~G~~~v~~as~d~~~~a~fav 131 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEIDGAKE----------TMKKQDGYYIGKETKHVRFSSENPDNPAKFYI 131 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEETTEEE----------EECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEECCEEE----------ecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 34676755544432 356764 4569999999999874 566789999999976 4555433113677766
Q ss_pred EEe
Q 029565 149 VIS 151 (191)
Q Consensus 149 v~~ 151 (191)
..+
T Consensus 132 ~sA 134 (289)
T 1ywk_A 132 SCV 134 (289)
T ss_dssp EEE
T ss_pred Ecc
Confidence 654
No 167
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=92.15 E-value=0.48 Score=34.50 Aligned_cols=54 Identities=20% Similarity=0.163 Sum_probs=37.6
Q ss_pred EEEEEEeCEEEEEE-CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEE
Q 029565 89 EIFIVLKGSGTLYL-ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLV 148 (191)
Q Consensus 89 E~~~Vl~G~~~v~i-~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~ 148 (191)
..+.|++|++++.. +++.-.. -.+.+.+.+|+..+++|..+|++. .++ ++++-+
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~---~~~~~~~~~~~~~~i~Pq~wHrVe-~sd--D~~f~l 94 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATE---PEIKVVINAGQFATSPPQYWHRIE-LSD--DAQFNI 94 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCS---CSEEEEEETTEEEEECTTCEEEEE-ECT--TCEEEE
T ss_pred EEEEEEEeEEEEEEEcCCCCCc---ccEEEEeCCCCCceeCCCceEEEE-ECC--CeEEEE
Confidence 46889999999984 4321000 012357889999999999999999 555 466643
No 168
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=92.04 E-value=1.5 Score=36.26 Aligned_cols=77 Identities=18% Similarity=0.222 Sum_probs=53.5
Q ss_pred eeEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECC-C----CcEEEEeC
Q 029565 65 KEIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPV-N----DAHQVWNT 138 (191)
Q Consensus 65 ~~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~-g----~~H~~~N~ 138 (191)
....+...+++||......... ..-++||++|++++ ++.. ..+.+||.+.+.. + ..-.+.+.
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v--~g~~----------~~l~~~d~~~~~~~~~~~~~~l~l~a~ 232 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF--GADN----------IEGKAGQALFFSRHNRGEETELNVTAR 232 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE--TTTT----------EEEETTEEEEECCCCTTCEEEEEEEES
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE--CCCc----------eEeCCCcEEEEcCCCCCccceEEEEeC
Confidence 3677888999999987655444 44589999999665 5521 1567999999985 5 44456653
Q ss_pred CCCCcEEEEEEEeCCCce
Q 029565 139 NENEDLQMLVVISRPPVK 156 (191)
Q Consensus 139 g~~e~~~~l~v~~~p~~~ 156 (191)
+++++|.+...|--+
T Consensus 233 ---~~a~~Ll~~G~Pl~e 247 (277)
T 2p17_A 233 ---EKLRLLLYAGEPVNE 247 (277)
T ss_dssp ---SSEEEEEEEECCCCC
T ss_pred ---CCcEEEEEeccccCC
Confidence 358888887655433
No 169
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=91.74 E-value=1.5 Score=36.47 Aligned_cols=80 Identities=11% Similarity=0.129 Sum_probs=53.5
Q ss_pred eEEEEEEEECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDL 144 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~ 144 (191)
.+.+...+++||......... ..-++||++|++++ +++.. ...+.++..+++.+|..-.+.|..+ +++
T Consensus 168 ~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v--~g~~~--------~~~~~~~~~~~l~~gd~~~i~~~a~-~~a 236 (290)
T 1j1l_A 168 PTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYI--GPDDA--------QQKIEPHHTAVLGEGDSVQVENKDP-KRS 236 (290)
T ss_dssp CEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEE--SCTTS--------CEEECTTEEEEECSCSEEEEECCSS-SCE
T ss_pred CcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEE--CCccc--------ceeccCceEEEecCCCEEEEEEcCC-CCc
Confidence 567888899999987544433 45589999999877 44210 0134566777777776666776545 479
Q ss_pred EEEEEEeCCCce
Q 029565 145 QMLVVISRPPVK 156 (191)
Q Consensus 145 ~~l~v~~~p~~~ 156 (191)
++|.+...|--+
T Consensus 237 ~~LLl~G~Pl~e 248 (290)
T 1j1l_A 237 HFVLIAGEPLRE 248 (290)
T ss_dssp EEEEEEECCCCS
T ss_pred EEEEEEcccCCC
Confidence 999887755433
No 170
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=91.15 E-value=0.39 Score=40.49 Aligned_cols=31 Identities=10% Similarity=0.110 Sum_probs=23.3
Q ss_pred eeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeC
Q 029565 117 HFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISR 152 (191)
Q Consensus 117 ~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~ 152 (191)
+.++|||++++|+|.+|.+.. ...++.+...
T Consensus 160 v~l~pGd~~~ipaGt~HA~~~-----G~~~~Eiq~~ 190 (319)
T 1qwr_A 160 IKIKPGDFYYVPSGTLHALCK-----GALVLETQQN 190 (319)
T ss_dssp EECCTTCEEEECTTCCEEECS-----SEEEEEEEES
T ss_pred EEcCCCCEEEcCCCCceEecC-----CCeEEEEEeC
Confidence 688999999999999999843 2335555533
No 171
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=90.40 E-value=0.32 Score=42.07 Aligned_cols=67 Identities=21% Similarity=0.199 Sum_probs=45.2
Q ss_pred ECCCCcCCceecCCcE--EEEEEeCEEEEEECC--ee------------------eecCCCCCceeeecCCeEEEECCCC
Q 029565 74 FSPGTRTPIHRHSCEE--IFIVLKGSGTLYLAS--SS------------------HEKHPGKPQEHFFFANSTFHIPVND 131 (191)
Q Consensus 74 i~PG~~~~~H~H~~eE--~~~Vl~G~~~v~i~~--~~------------------~~l~~gk~~d~~l~~GD~v~ip~g~ 131 (191)
=++|+.++.|...... +..+++|+=.+.+-. +. +-....+..++.+.|||++++|+|-
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 4556667788888443 457888887775421 00 0001123446789999999999999
Q ss_pred cEEEEeCCC
Q 029565 132 AHQVWNTNE 140 (191)
Q Consensus 132 ~H~~~N~g~ 140 (191)
+|.+.|..+
T Consensus 234 wH~V~nled 242 (371)
T 3k3o_A 234 IHAVLTPVD 242 (371)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999865
No 172
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=90.01 E-value=0.88 Score=32.43 Aligned_cols=62 Identities=23% Similarity=0.285 Sum_probs=46.8
Q ss_pred ECCCCcCCceecC-CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEE
Q 029565 74 FSPGTRTPIHRHS-CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVV 149 (191)
Q Consensus 74 i~PG~~~~~H~H~-~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v 149 (191)
+.||. ++... ..|.+-|++|..++.+.|.... ..+.+|+++.+|+|..-.++.. ++..++|.
T Consensus 43 m~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~eW--------~~~~aGesF~VpanssF~lkv~---~~t~Y~Cs 105 (106)
T 3eo6_A 43 LHPGV---YTLSSEVAETIRVLSGMAYYHAEGANDV--------QELHAGDSMVIPANQSYRLEVM---EPLDYLLS 105 (106)
T ss_dssp ECSEE---EEECCSSCEEEEEEEEEEEEECTTCSSC--------EEEETTCEEEECSSSCEEEEEE---EEEEEEEE
T ss_pred EeeeE---EEecCCCcEEEEEEEeEEEEECCCCccC--------EEECCCCEEEECCCCcEEEEEC---ceEEEEEc
Confidence 56663 34444 6799999999999999885311 3778999999999999888875 25666663
No 173
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=89.48 E-value=0.63 Score=38.90 Aligned_cols=57 Identities=7% Similarity=0.052 Sum_probs=40.7
Q ss_pred eEEEEEEEECCCCcCCceecCCc-EEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCc-EEEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCE-EIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDA-HQVW 136 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~e-E~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~-H~~~ 136 (191)
.|.+.+.++.+.... .. ..- .+++|++| +++..+++. ..+.+|+++++|++.. -.+.
T Consensus 229 ~F~v~~~~~~~~~~~--~~-~~~~~il~v~~G-~~i~~~~~~----------~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI--KT-GGVMNILYAAEG-YFILRGKET----------ADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp SEEEEEEEEEEEEEE--EC-CSBCEEEEEEES-CEEEESSSE----------EEECTTCEEEECTTCCEEEEE
T ss_pred eEEEEEEEECCceEE--ec-CCceEEEEEccc-EEEEeCCeE----------EEEccceEEEEeCCCceEEEE
Confidence 577777777642221 22 445 79999999 999887654 4788999999999884 4443
No 174
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.88 E-value=0.3 Score=42.47 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=22.0
Q ss_pred eeeecCCeEEEECCCCcEEEEeCCC
Q 029565 116 EHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 116 d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
++.-.+||+|+||+|.+|+++|..+
T Consensus 294 ~~~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 294 TLIQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp EEEEETTCEEEECTTCEEEEEESSE
T ss_pred EEEEcCCCEEEecCCCHHHHhcccc
Confidence 3455799999999999999999976
No 175
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=88.70 E-value=0.44 Score=41.51 Aligned_cols=67 Identities=22% Similarity=0.218 Sum_probs=43.6
Q ss_pred ECCCCcCCceecCCc--EEEEEEeCEEEEEECC-ee-------------------eecCCCCCceeeecCCeEEEECCCC
Q 029565 74 FSPGTRTPIHRHSCE--EIFIVLKGSGTLYLAS-SS-------------------HEKHPGKPQEHFFFANSTFHIPVND 131 (191)
Q Consensus 74 i~PG~~~~~H~H~~e--E~~~Vl~G~~~v~i~~-~~-------------------~~l~~gk~~d~~l~~GD~v~ip~g~ 131 (191)
=++|+.++.|..... -+..+++|+=.+.+-. .. +.....+..++.+.+||++++|+|-
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 345566677877733 3567778877765411 00 0000012345789999999999999
Q ss_pred cEEEEeCCC
Q 029565 132 AHQVWNTNE 140 (191)
Q Consensus 132 ~H~~~N~g~ 140 (191)
+|.+.|..+
T Consensus 261 wH~V~nled 269 (392)
T 3pua_A 261 IYATLTPVD 269 (392)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999865
No 176
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=88.01 E-value=2.9 Score=33.03 Aligned_cols=83 Identities=13% Similarity=0.088 Sum_probs=49.5
Q ss_pred EEEEEEEECCCCcCCceecCCc---EEEEEE----eCEEEEEECCeeee-----cCCC-----CC-ceeeecCCeEEEEC
Q 029565 67 IEVWLQTFSPGTRTPIHRHSCE---EIFIVL----KGSGTLYLASSSHE-----KHPG-----KP-QEHFFFANSTFHIP 128 (191)
Q Consensus 67 ~~~~~~~i~PG~~~~~H~H~~e---E~~~Vl----~G~~~v~i~~~~~~-----l~~g-----k~-~d~~l~~GD~v~ip 128 (191)
.+.+....++|+....|.|+.. =++|+- .|.+.+.-...... ...+ .. ..+.-.+|+.+++|
T Consensus 103 ~~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFp 182 (216)
T 2rg4_A 103 EDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWE 182 (216)
T ss_dssp EEEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEE
T ss_pred eeEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEEC
Confidence 3678888999999999999843 355664 34555543210000 0000 00 02455799999999
Q ss_pred CCCcEEEEeCCCCCcEEEEEEE
Q 029565 129 VNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 129 ~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
+..+|.+.-... +.-|+-+.+
T Consensus 183 S~l~H~V~p~~~-~~~RiSIsF 203 (216)
T 2rg4_A 183 SWLRHEVPMNMA-EEDRISVSF 203 (216)
T ss_dssp TTSCEEECCCCS-SSCEEEEEE
T ss_pred CCCEEeccCCCC-CCCEEEEEE
Confidence 999999865333 234555444
No 177
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=87.99 E-value=3.9 Score=33.30 Aligned_cols=73 Identities=8% Similarity=0.055 Sum_probs=49.2
Q ss_pred eEEEEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEE
Q 029565 66 EIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 66 ~~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~ 145 (191)
...+...+++||...........-++||++|++++.-++.. +..+.+||.+.+..+..-.+.+. ++++
T Consensus 181 ~~~~~~~~L~~g~~~~~~~~~~~~~l~v~~G~v~v~g~~~~---------~~~l~~gd~~~l~~~~~l~l~a~---~~a~ 248 (256)
T 2vec_A 181 QVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEE---------KAALTCGDGAFIRDEANITLVAD---SPLR 248 (256)
T ss_dssp SCEEEEEEECTTCEEEEECSSSEEEEEEEESCEEEEETTEE---------EEEECTTCEEEEESCSEEEEEES---SSEE
T ss_pred CcEEEEEEECCCCEEEEecCCCeEEEEEEECEEEECCcccc---------ceEECCCCEEEECCCCeEEEEeC---CCCE
Confidence 55677889999987754443323689999999887532111 13678999999987665566653 3577
Q ss_pred EEEEE
Q 029565 146 MLVVI 150 (191)
Q Consensus 146 ~l~v~ 150 (191)
+|.+-
T Consensus 249 ~LL~d 253 (256)
T 2vec_A 249 ALLID 253 (256)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77653
No 178
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=87.49 E-value=6.3 Score=30.86 Aligned_cols=106 Identities=8% Similarity=0.113 Sum_probs=65.5
Q ss_pred eEecCCCCCCccCCCCcE-EEEEEeeccCCcee--EEEEEEEECCCCcCCceecC-CcEEEEEEeCE-EEEEECCeeeec
Q 029565 35 VRNISELPQDNYGREGLA-HITVAGSILHGMKE--IEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGS-GTLYLASSSHEK 109 (191)
Q Consensus 35 V~~i~d~~~~~~~~~G~~-~~~~~~~~~~g~~~--~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~-~~v~i~~~~~~l 109 (191)
|++.+|.+...+.-+|.. ......+.. +..+ ..+...++.. ..+.-.-+ .+.++.+|+|. +.+..++..
T Consensus 13 ~i~~~d~~~~pWkNGgG~TrEI~~~P~~-~~~~F~wRiSiA~V~~--~g~FS~FpG~dR~l~lL~G~gl~L~~~g~~--- 86 (193)
T 3esg_A 13 VWRAVDYVRMPWKNGGGSTEEITRDAGT-GLEGFGWRLSIADIGE--SGGFSSFAGYQRVITVIQGAGMVLTVDGEE--- 86 (193)
T ss_dssp EECGGGCEEEECTTSSEEEEEEEECCCB-TTTBCSEEEEEEEECS--SEECCCCTTCEEEEEEEESSCEEEEETTSC---
T ss_pred EecHHHCCcccccCCCeEEEEEEEcCCC-cCCCceEEEEEEEEcC--CCCCCCCCCceEEEEEEcCCcEEEEeCCCc---
Confidence 445556665555433433 333333322 2123 3455555654 33344445 57789999998 888887743
Q ss_pred CCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 110 HPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 110 ~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
+..+.+++.+.|+.+..=..++.+. +++-+.++.++.
T Consensus 87 ------~~~L~~~~p~~F~G~~~v~a~L~~G--~v~DfNlM~rr~ 123 (193)
T 3esg_A 87 ------QRGLLPLQPFAFRGDSQVSCRLITG--PIRDFNLIYSPE 123 (193)
T ss_dssp ------CEEECBTCCEEEETTSCEEEEESSS--CEEEEEEEECTT
T ss_pred ------cEecCCCCCEEeCCCCeEEEEECCC--CEEEEEEEEcCC
Confidence 1467788889998888777777654 688888887664
No 179
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=86.37 E-value=0.63 Score=39.57 Aligned_cols=66 Identities=23% Similarity=0.205 Sum_probs=46.0
Q ss_pred CCCCcCCceecCCc--EEEEEEeCEEEEEECC--eeeec--------------------------C------CCCCceee
Q 029565 75 SPGTRTPIHRHSCE--EIFIVLKGSGTLYLAS--SSHEK--------------------------H------PGKPQEHF 118 (191)
Q Consensus 75 ~PG~~~~~H~H~~e--E~~~Vl~G~~~v~i~~--~~~~l--------------------------~------~gk~~d~~ 118 (191)
++|..++.|.+... -+..++.|+=.+.+-. ....+ . ..+..++.
T Consensus 180 ~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~~ 259 (336)
T 3k2o_A 180 PPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEIL 259 (336)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCEEEE
T ss_pred CCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceEEEE
Confidence 44566788988854 4788889987765421 10000 0 11234678
Q ss_pred ecCCeEEEECCCCcEEEEeCCC
Q 029565 119 FFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 119 l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
+.|||++++|+|-+|.+.|.++
T Consensus 260 l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 260 QKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp ECTTCEEEECTTCEEEEEESSC
T ss_pred ECCCCEEEeCCCCcEEEecCCC
Confidence 9999999999999999999876
No 180
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=85.76 E-value=7.6 Score=32.21 Aligned_cols=111 Identities=12% Similarity=0.142 Sum_probs=61.8
Q ss_pred CeeEecCCCCCCccCCC-CcEEEEEE---eeccCCceeEEEEEEEECCCC---cCCceecC-C-cEEEEE-Ee--CEEEE
Q 029565 33 PLVRNISELPQDNYGRE-GLAHITVA---GSILHGMKEIEVWLQTFSPGT---RTPIHRHS-C-EEIFIV-LK--GSGTL 100 (191)
Q Consensus 33 ~~V~~i~d~~~~~~~~~-G~~~~~~~---~~~~~g~~~~~~~~~~i~PG~---~~~~H~H~-~-eE~~~V-l~--G~~~v 100 (191)
+.....+++....++.. +...+.+. .+......++.+....+.||+ +.|+|.|. . ||++|. +. |.+--
T Consensus 142 ~r~I~~~dv~~~~rG~~~~sn~R~I~~il~~~~~~~~qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q 221 (282)
T 1xru_A 142 TKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH 221 (282)
T ss_dssp CEEECHHHHCCEEECCGGGTCCEEEEEEESTTTCCCSSCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEE
T ss_pred CEEECHHHCCeeeccCCCCCCcEEEEEeeCCCCCchhhEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEE
Confidence 34445556666555531 22222222 121122235667778888886 46899999 3 555554 22 32222
Q ss_pred EEC--CeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 101 YLA--SSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 101 ~i~--~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
.++ ++.. ...+.-||+|.+|++.+|. ..|. +...||++...+.
T Consensus 222 ~~g~p~Etr--------hi~V~n~daVlvP~wh~h~--~~G~-~~Y~ylwvMAG~n 266 (282)
T 1xru_A 222 MMGQPQETR--------HIVMHNEQAVISPSWSIHS--GVGT-KAYTFIWGMVGEN 266 (282)
T ss_dssp EEEETTEEE--------EEEECSSEEEEECTTCEEE--EEES-SCCEEEEEEEESC
T ss_pred EeCCCCCee--------EEEEECCCEEEeCCCCCCC--CCCc-cceEEEEEEEcCC
Confidence 232 2221 2467899999999766666 3455 3567999986543
No 181
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=85.28 E-value=2.4 Score=35.30 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=39.0
Q ss_pred CcEE-EEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCc-EEEEeCCCCCcEEEEEEEe
Q 029565 87 CEEI-FIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDA-HQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 87 ~eE~-~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~-H~~~N~g~~e~~~~l~v~~ 151 (191)
..|+ ++.+.|.+++.++|+.+ .+..-|++|+|.|.. -.+.......++++.+...
T Consensus 78 ~rE~~iV~l~G~~~V~vdG~~f----------~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sA 134 (282)
T 1xru_A 78 RRELGVINIGGAGTITVDGQCY----------EIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCA 134 (282)
T ss_dssp TEEEEEEECSSCEEEEETTEEE----------EECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEE
T ss_pred CcEEEEEEccCeEEEEECCEEE----------ecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEcc
Confidence 5665 45569999999999874 566789999999986 5554442223677766554
No 182
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=83.54 E-value=2.8 Score=30.05 Aligned_cols=46 Identities=11% Similarity=0.217 Sum_probs=31.9
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..-...+.+++|++|.+.+..+++.. ..+.+||.+
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~~---------~~~~~G~~f 108 (154)
T 3pna_A 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNEWA---------TSVGEGGSF 108 (154)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEEEETTEEE---------EEECTTCEE
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEECCEEE---------EEecCCCEe
Confidence 4567777654332233677999999999999887653 256788864
No 183
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=82.74 E-value=0.73 Score=38.52 Aligned_cols=20 Identities=20% Similarity=-0.082 Sum_probs=18.4
Q ss_pred eeecCCeEEEECCCCcEEEE
Q 029565 117 HFFFANSTFHIPVNDAHQVW 136 (191)
Q Consensus 117 ~~l~~GD~v~ip~g~~H~~~ 136 (191)
+.++|||++|+|+|.+|.+-
T Consensus 160 v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 160 FETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp EECCTTCEEEECTTCCEEEE
T ss_pred eECCCCCEEEcCCCCceEcC
Confidence 57899999999999999984
No 184
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=82.36 E-value=3.3 Score=28.93 Aligned_cols=46 Identities=4% Similarity=-0.002 Sum_probs=30.2
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..-...+.+++|++|.+.+..++... ..+.+||.+
T Consensus 48 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~g~~~---------~~~~~G~~f 93 (139)
T 3ocp_A 48 PVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKL---------CTMGPGKVF 93 (139)
T ss_dssp EEEECSSCEEECTTSCCCEEEEEEECCEEEEETTEEE---------EEECTTCEE
T ss_pred EEecCCCCEEEeCCCcCCEEEEEEeCEEEEEECCEEE---------EEeCCCCEe
Confidence 3456666543222223567999999999998877642 366788864
No 185
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=81.71 E-value=4.8 Score=33.29 Aligned_cols=87 Identities=13% Similarity=-0.022 Sum_probs=52.3
Q ss_pred ccCcCcccCCCeeEecCCCCCCccCCCC---cEEEEEEeeccCCceeEEEEEEEECCCCcCC-ceecCCcEEEEEEeCEE
Q 029565 23 DASHCSIKGFPLVRNISELPQDNYGREG---LAHITVAGSILHGMKEIEVWLQTFSPGTRTP-IHRHSCEEIFIVLKGSG 98 (191)
Q Consensus 23 ~~~~~~~~~~~~V~~i~d~~~~~~~~~G---~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~-~H~H~~eE~~~Vl~G~~ 98 (191)
+.+.......-+|.+.+.++......+| .....+.. +.. +...+++.+.||.... .-.|+..|=.|+|+|..
T Consensus 174 d~P~Ar~~d~I~v~Ds~~L~W~~t~~p~f~~~~~K~Lr~---D~~-G~~TrLlr~~Pg~dt~~v~iHdy~EEvY~LeG~~ 249 (303)
T 2qdr_A 174 DHPDARLSDFIPALDSKLLPWGKADTVQFVQANKKWLRK---DIN-GGGVWLLAILPHFDNKYQMIQPYNEEGYCLTGYC 249 (303)
T ss_dssp CCTTCCGGGCEEEEEGGGSCCEECSSSTTCSEEEEEEEE---CTT-SCEEEEEEECSSEECCSEEEECSCEEEEEEEEEE
T ss_pred CCcchhhcccceecccccCCcccCCCCCccHHHHHHhhc---CCC-CCeEEEEEECCCCCCCCceeeccceeEEEEeeec
Confidence 3344444455556666555543333334 22222222 122 4577888999997654 56788777789999976
Q ss_pred EEEECCeeeecCCCCCceeeecCCeEEEECCCCcEE
Q 029565 99 TLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQ 134 (191)
Q Consensus 99 ~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~ 134 (191)
. .|+..+-|++.+|.
T Consensus 250 --d-------------------~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 250 --D-------------------VGDYRIVKDHYWYC 264 (303)
T ss_dssp --E-------------------ETTEEEETTEEEEE
T ss_pred --c-------------------CceeeEcCCCCccC
Confidence 1 34566678999988
No 186
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=81.43 E-value=3.8 Score=29.12 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=30.8
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEE
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHI 127 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~i 127 (191)
.++++|...-..--+.+.+++|++|.+.+..++... ..+.+||.+-.
T Consensus 53 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~---------~~~~~G~~fG~ 99 (160)
T 4f8a_A 53 VHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDEVV---------AILGKGDVFGD 99 (160)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEETTEEE---------EEEETTCEEEC
T ss_pred eeeCCCCEEEeCCCCccEEEEEEeeEEEEEECCEEE---------EEecCCCEeCc
Confidence 445555543222122567999999999998877542 36788887653
No 187
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=79.56 E-value=25 Score=29.14 Aligned_cols=117 Identities=11% Similarity=0.163 Sum_probs=57.3
Q ss_pred cCCCeeEecCCCCCCccCCC-CcEEEEEE---eeccCCceeEEEEEEEECCCC---cCCceecC-CcEEEE-E-EeCE-E
Q 029565 30 KGFPLVRNISELPQDNYGRE-GLAHITVA---GSILHGMKEIEVWLQTFSPGT---RTPIHRHS-CEEIFI-V-LKGS-G 98 (191)
Q Consensus 30 ~~~~~V~~i~d~~~~~~~~~-G~~~~~~~---~~~~~g~~~~~~~~~~i~PG~---~~~~H~H~-~eE~~~-V-l~G~-~ 98 (191)
.=.+.....+++....++.. +...+.+. .+......++.+....+.||+ +.|+|.|. ..|.+| . +... .
T Consensus 139 ~~P~r~I~~~dv~~~~rG~~~~sN~R~I~~il~~~~~~s~qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~ 218 (289)
T 1ywk_A 139 KYPNVKISIDEITPMETGDPLTLNQRKIYQYIHPNVCESCQLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTR 218 (289)
T ss_dssp CCCCEEECTTTCCCCCBCCGGGTCCEEEEEEESTTTCCCSSCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCC
T ss_pred CCCCEEECHHHCCeeeccCCCCCCcEEEEEeeCCCCCchheEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCe
Confidence 33445556667776666531 22222222 121122235667778888885 45899999 445433 2 2221 1
Q ss_pred EEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 99 TLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 99 ~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
.++..++. ...+...+.-||+|.+|+|-.|.- .|. ....||++...+.
T Consensus 219 v~h~~g~p-----dEtrh~~V~n~daVlvP~wgyHp~--~Gt-~~Y~ylwvMAG~n 266 (289)
T 1ywk_A 219 IFHMMGKP-----DETKHLVMSNEQAAISPSWSIHSG--VGT-SNYSFIWAMCGEN 266 (289)
T ss_dssp EEEEESST-----TSCEEEEECTTEEEEECTTSCCCE--EES-SCCEEEEEEECC-
T ss_pred EEEECCCC-----CceEEEEEECCCEEEeCCCcccCC--CCC-cCeEEEEEEEcCC
Confidence 22222211 111125678999999999988863 343 2456999987543
No 188
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=78.94 E-value=3 Score=29.17 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=29.1
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 30 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~g~~~ 80 (149)
T 2pqq_A 30 EVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENML-------AVVGPSELI 80 (149)
T ss_dssp EEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEE-------EEECTTCEE
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEE-------EEcCCcCEe
Confidence 45566665542222224669999999999865 3443322 266788865
No 189
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=78.17 E-value=2.6 Score=29.74 Aligned_cols=70 Identities=10% Similarity=0.114 Sum_probs=37.2
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEEC---CC---CcEEEEeCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIP---VN---DAHQVWNTNEN 141 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip---~g---~~H~~~N~g~~ 141 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+=.. .+ ..+.+...+
T Consensus 37 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~G~~~G~~~~~~~~~~~~~~~~a~~-- 107 (154)
T 2z69_A 37 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKIL-------EVTNERNTFAEAMMFMDTPNYVATAQAVV-- 107 (154)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CC-------EEECTTEEESGGGGGSSCSBCSSEEEESS--
T ss_pred EEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEE-------EEccCCCeeccHhhccCCCCCceEEEEcc--
Confidence 44566665442222235669999999999974 2333222 367788875211 12 344555543
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
+++++.+-
T Consensus 108 -~~~~~~i~ 115 (154)
T 2z69_A 108 -PSQLFRFS 115 (154)
T ss_dssp -SEEEEEEE
T ss_pred -ceEEEEEC
Confidence 45666553
No 190
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=78.15 E-value=1.4 Score=38.31 Aligned_cols=21 Identities=5% Similarity=0.028 Sum_probs=18.8
Q ss_pred eeecCCeEEEECCCCcEEEEe
Q 029565 117 HFFFANSTFHIPVNDAHQVWN 137 (191)
Q Consensus 117 ~~l~~GD~v~ip~g~~H~~~N 137 (191)
+.++|||.+|+|+|.+|.+..
T Consensus 242 v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 242 VKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEECTTCEEEECTTCCEEEEE
T ss_pred EECCCCCEEEcCCCCceEcCC
Confidence 578999999999999999853
No 191
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=77.93 E-value=20 Score=28.01 Aligned_cols=105 Identities=11% Similarity=0.125 Sum_probs=60.7
Q ss_pred eEecCCCCCCccCC-CCcEEEEEEeeccCCcee--EEEEEEEECCCCcCCceecC-CcEEEEEEeCE-EEEEECCeeeec
Q 029565 35 VRNISELPQDNYGR-EGLAHITVAGSILHGMKE--IEVWLQTFSPGTRTPIHRHS-CEEIFIVLKGS-GTLYLASSSHEK 109 (191)
Q Consensus 35 V~~i~d~~~~~~~~-~G~~~~~~~~~~~~g~~~--~~~~~~~i~PG~~~~~H~H~-~eE~~~Vl~G~-~~v~i~~~~~~l 109 (191)
+.+.+|.+...+.- .|..+... .+...+..+ ..+...++.. ..+.-.-+ .+.++.+|+|. +.+..++...
T Consensus 8 ii~~~d~~~~pWkNGgG~TrEI~-~P~~~~~~~F~wRiSiA~V~~--~g~FS~FpGidR~i~lL~G~g~~L~~~~~~~-- 82 (200)
T 1yll_A 8 ILRAVDYPRMPWKNGAGSTEEIA-RDGGDGLDGFGWRLSIADVGE--SGGFSGFAGYQRIISVLEGGGMRLRVDGAES-- 82 (200)
T ss_dssp EECGGGCCEEC-----CEEEEEE-ESSCSGGGSCSEEEEEEEECS--CEEECCCTTCEEEEEEEESSCEEEEETTEEC--
T ss_pred EECHHHCCcccccCCCEeEEEEE-ecCCCCcCCceEEEEEEEecc--CCCCCCCCCccEEEEEEeCCcEEEecCCCcc--
Confidence 34455666555542 34444444 542222222 3444555554 23333445 56789999998 8888888652
Q ss_pred CCCCCceeee-cCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCC
Q 029565 110 HPGKPQEHFF-FANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPP 154 (191)
Q Consensus 110 ~~gk~~d~~l-~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~ 154 (191)
. + .+++.+.|+.+..-..+..+. +++-+.++.++.
T Consensus 83 -------~-L~~~~~p~~F~G~~~v~a~L~~G--~~~DfNlM~rr~ 118 (200)
T 1yll_A 83 -------A-PLRARQAFAFSGDSEVHCTLLDG--AIRDFNLIYAPR 118 (200)
T ss_dssp -------C-CBCBTCCEEEETTSCEEEEESSS--CEEEEEEEECTT
T ss_pred -------c-cCCCCCcEEeCCCCcEEEEECCC--CEEEEEEEEcCC
Confidence 2 4 678888888777766666553 577777776654
No 192
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=77.71 E-value=2.5 Score=36.20 Aligned_cols=65 Identities=22% Similarity=0.241 Sum_probs=43.5
Q ss_pred CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCCCceeeecCCCCC
Q 029565 87 CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPVKVFIYEDWSM 165 (191)
Q Consensus 87 ~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~~~~~~~~w~~ 165 (191)
++..+.|.+|+.++..++.. | ..+..+.|+|+.++.|-++|.|.-.| .++..-+..- ..|-||++
T Consensus 354 ge~hY~v~~G~lTL~W~~~d-----G-t~~a~L~PDgSAwv~PFV~H~w~G~G-----tVlkLgsG~h---l~y~d~le 418 (443)
T 3g7d_A 354 AENHYVVTEGRLTLEWDGPD-----G-PASVELEPDGSAWTGPFVRHRWHGTG-----TVLKFGSGAH---LGYQDWLE 418 (443)
T ss_dssp SEEEEEEEESCEEEEEEETT-----E-EEEEEECTTCEEEECTTCCEEEESSE-----EEEEEEECST---TCHHHHHH
T ss_pred ccceEEEecCceEEEecCCC-----C-ccceEECCCCceeecccccccccCCc-----eEEEeccCCc---cccceeeh
Confidence 34457799999999876321 1 12468999999999999999998433 2444333222 35667775
No 193
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=77.21 E-value=17 Score=27.39 Aligned_cols=66 Identities=12% Similarity=0.181 Sum_probs=38.8
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEE--ECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEE
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLY--LASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVV 149 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~--i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v 149 (191)
.++++|...-..-.+...+++|++|.+.+. -+|+...+ ..+.+||.+- ....+.+...+ +++++.+
T Consensus 26 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~-------~~~~~G~~fG--~~~~~~~~A~~---~~~v~~i 93 (222)
T 1ft9_A 26 KIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISL-------FYLTSGDMFC--MHSGCLVEATE---RTEVRFA 93 (222)
T ss_dssp EEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEE-------EEEETTCEEE--SCSSCEEEESS---CEEEEEE
T ss_pred EEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEE-------EEcCCCCEec--CCCCEEEEEcc---ceEEEEE
Confidence 345555443222223456999999999985 24555443 2678999776 33445555543 4566655
No 194
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=76.71 E-value=3.5 Score=31.09 Aligned_cols=46 Identities=15% Similarity=0.270 Sum_probs=29.4
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...++||...-..-.+.+.+++|++|.+.+...+.. ...+.+||.+
T Consensus 97 ~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~---------~~~l~~G~~f 142 (202)
T 3bpz_A 97 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNK---------EMKLSDGSYF 142 (202)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSC---------CEEEETTCEE
T ss_pred ceEECCCCEEEECCCcCCeEEEEeccEEEEEECCCe---------EEEEcCCCEe
Confidence 455777765422222356799999999999754321 1367888865
No 195
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=76.38 E-value=5.9 Score=29.25 Aligned_cols=70 Identities=13% Similarity=0.205 Sum_probs=39.5
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEE-EC---CCCc--EEEEeCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFH-IP---VNDA--HQVWNTNEN 141 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~-ip---~g~~--H~~~N~g~~ 141 (191)
...+++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+- +. .+.+ +.+...+
T Consensus 32 ~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~-------~~~~~g~~~ge~~~~~~~~~~~~~~~a~~-- 102 (194)
T 3dn7_A 32 LKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTT-------QFAIENWWLSDYMAFQKQQPADFYIQSVE-- 102 (194)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEE-------EEEETTCEECCHHHHHHTCBCSSEEEESS--
T ss_pred EEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEE-------EEccCCcEEeehHHHhcCCCCceEEEEEC--
Confidence 34456665432221225679999999999864 3444433 2578898874 21 2333 3455443
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
+++++.+-
T Consensus 103 -~~~v~~i~ 110 (194)
T 3dn7_A 103 -NCELLSIT 110 (194)
T ss_dssp -CEEEEEEE
T ss_pred -CEEEEEEe
Confidence 46666653
No 196
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=75.80 E-value=5.4 Score=30.00 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=30.7
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 28 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~-------~~~~~G~~~ 78 (220)
T 3dv8_A 28 TQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITL-------YRLFDMDMC 78 (220)
T ss_dssp EEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEE-------EEECTTCEE
T ss_pred eEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEE-------EecCCCCee
Confidence 45567766543333345779999999999874 2343333 256788885
No 197
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=75.41 E-value=6.2 Score=30.14 Aligned_cols=69 Identities=12% Similarity=0.190 Sum_probs=38.7
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEE-----CCCCcEEEEeCCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHI-----PVNDAHQVWNTNENE 142 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~i-----p~g~~H~~~N~g~~e 142 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+-. .....+.+...+
T Consensus 36 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~-------~~~~~G~~~G~~~~~~~~~~~~~~~a~~--- 105 (237)
T 3fx3_A 36 WRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVV-------SVFTRGESFGEAVALRNTPYPVSAEAVT--- 105 (237)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEE-------EEEETTEEECHHHHHHTCCCSSEEEESS---
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEE-------EEeCCCCEechHHHhcCCCCCceEEECC---
Confidence 34566665442222235679999999999875 3343333 26778887622 112234455443
Q ss_pred cEEEEEE
Q 029565 143 DLQMLVV 149 (191)
Q Consensus 143 ~~~~l~v 149 (191)
++.++.+
T Consensus 106 ~~~v~~i 112 (237)
T 3fx3_A 106 PCEVMHI 112 (237)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 4566655
No 198
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=75.13 E-value=7.7 Score=27.76 Aligned_cols=48 Identities=8% Similarity=0.191 Sum_probs=30.4
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE--CCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL--ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i--~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..--+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~-------~~~~~G~~f 112 (161)
T 3idb_B 63 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCV-------GNYDNRGSF 112 (161)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEE-------EEEESCCEE
T ss_pred eeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEE-------EEcCCCCEe
Confidence 45677776543222335779999999999965 3444333 257788854
No 199
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=74.79 E-value=1.9 Score=38.01 Aligned_cols=21 Identities=10% Similarity=0.102 Sum_probs=18.5
Q ss_pred eeecCCeEEEECCCCcEEEEe
Q 029565 117 HFFFANSTFHIPVNDAHQVWN 137 (191)
Q Consensus 117 ~~l~~GD~v~ip~g~~H~~~N 137 (191)
+.++|||++|+|+|.+|.+..
T Consensus 268 v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 268 VGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEECTTCEEEECTTCCEEEEE
T ss_pred EecCCCCEEecCCCCccccCC
Confidence 349999999999999999864
No 200
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=74.58 E-value=4.1 Score=30.89 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=32.0
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFH 126 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ 126 (191)
....++||...-..-.....+++|++|.+.+..++... ..+.+||.+=
T Consensus 99 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~---------~~l~~G~~fG 146 (212)
T 3ukn_A 99 KTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVL---------AILGKGDLIG 146 (212)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECCEEEESSSCEE---------EEECTTCEEE
T ss_pred heEEeCCCCEEEECCCcccEEEEEEecEEEEEECCeEE---------EEecCCCCcC
Confidence 34567777654222222578999999999998776432 3677888764
No 201
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=74.17 E-value=4.7 Score=27.91 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=21.5
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL 102 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i 102 (191)
....+++|...-..-.+.+.+++|++|.+.+..
T Consensus 30 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~ 62 (142)
T 3mdp_A 30 EEKSFPTGSVIFKENSKADNLMLLLEGGVELFY 62 (142)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEC
T ss_pred cEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEE
Confidence 345566666432222225679999999999964
No 202
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=74.14 E-value=3.8 Score=31.31 Aligned_cols=67 Identities=16% Similarity=0.185 Sum_probs=39.5
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEE-----ECCCCcEEEEeCCCCCcEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFH-----IPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~-----ip~g~~H~~~N~g~~e~~~ 145 (191)
...+++|...-..-.+.+.+++|++|.+.+..+++.. ..+.+||.+= ...-....+...+ ++.
T Consensus 32 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~~~~~---------~~~~~g~~fGe~~l~~~~~~~~tv~a~~---~~~ 99 (246)
T 3of1_A 32 EKSVPKGATIIKQGDQGDYFYVVEKGTVDFYVNDNKV---------NSSGPGSSFGELALMYNSPRAATVVATS---DCL 99 (246)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEECCEEEESTTSCC---------EEECTTCEECHHHHHHTCCCSSEEEESS---CEE
T ss_pred eEEECCCCEEEecCCCCCEEEEEEeeEEEEEECCEEE---------EecCCCCeeehhHHhcCCCCCcEEEECC---CeE
Confidence 3445565543222234677999999999998876542 3678888753 1112233455543 456
Q ss_pred EEEE
Q 029565 146 MLVV 149 (191)
Q Consensus 146 ~l~v 149 (191)
++.+
T Consensus 100 ~~~i 103 (246)
T 3of1_A 100 LWAL 103 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6655
No 203
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=73.91 E-value=6.1 Score=31.24 Aligned_cols=47 Identities=11% Similarity=0.238 Sum_probs=32.7
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
....+++|...-..-...+.+++|++|.+.+..+|... ..+.+||.+
T Consensus 63 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~g~~~---------~~l~~G~~f 109 (291)
T 2qcs_B 63 FPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNEWA---------TSVGEGGSF 109 (291)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECCEEEEETTEEE---------EEECTTCEE
T ss_pred cEEEECCCCEEEeCCCCCceEEEEeeeEEEEEECCeEE---------EEcCCCCcc
Confidence 45567777654333333677999999999999887542 367788875
No 204
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=73.32 E-value=1.9 Score=37.57 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=44.3
Q ss_pred CCCCcCCceecCCcE--EEEEEeCEEEEEECCee-e-------------------ecCCCCCceeeecCCeEEEECCCCc
Q 029565 75 SPGTRTPIHRHSCEE--IFIVLKGSGTLYLASSS-H-------------------EKHPGKPQEHFFFANSTFHIPVNDA 132 (191)
Q Consensus 75 ~PG~~~~~H~H~~eE--~~~Vl~G~~~v~i~~~~-~-------------------~l~~gk~~d~~l~~GD~v~ip~g~~ 132 (191)
++|+.++.|.....- +..++.|+=.+.+-.-. . -....+..++.+.|||++++|+|-+
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 456667788887433 55778888776542210 0 0011234457899999999999999
Q ss_pred EEEEeCCC
Q 029565 133 HQVWNTNE 140 (191)
Q Consensus 133 H~~~N~g~ 140 (191)
|.+.|..+
T Consensus 263 H~V~nled 270 (397)
T 3kv9_A 263 HAVLTSQD 270 (397)
T ss_dssp EEEEEEEE
T ss_pred EEccCCcC
Confidence 99999865
No 205
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=72.75 E-value=6.2 Score=29.56 Aligned_cols=69 Identities=10% Similarity=0.170 Sum_probs=38.8
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEE-----CCCCcEEEEeCCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHI-----PVNDAHQVWNTNENE 142 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~i-----p~g~~H~~~N~g~~e 142 (191)
...+++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+-. .....+.+...+
T Consensus 24 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~g~~~G~~~~~~~~~~~~~~~a~~--- 93 (216)
T 4ev0_A 24 RRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTL-------ALLGPGELFGEMSLLDEGERSASAVAVE--- 93 (216)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEE-------EEECTTCEECHHHHHHCCBCSSEEEESS---
T ss_pred EEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEE-------EEecCCCEEeehhhcCCCCcceEEEEcC---
Confidence 34566665442222235679999999999864 3443333 26778887531 112234455443
Q ss_pred cEEEEEE
Q 029565 143 DLQMLVV 149 (191)
Q Consensus 143 ~~~~l~v 149 (191)
+++++.+
T Consensus 94 ~~~v~~i 100 (216)
T 4ev0_A 94 DTELLAL 100 (216)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 4566655
No 206
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=72.69 E-value=7 Score=29.55 Aligned_cols=49 Identities=10% Similarity=0.120 Sum_probs=30.4
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFH 126 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ 126 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+-
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~-------~~~~~g~~~G 87 (230)
T 3iwz_A 36 RRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVL-------GYFGSGEFVG 87 (230)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEE-------EEECTTCEES
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEE-------EEecCCCEEE
Confidence 44566666442222235679999999999875 3444333 2577888763
No 207
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=72.62 E-value=10 Score=26.11 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=27.4
Q ss_pred eecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEeCC
Q 029565 118 FFFANSTFHIPVNDAHQVWNTNENEDLQMLVVISRP 153 (191)
Q Consensus 118 ~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~~p 153 (191)
.|++||+++||+|.+-...+.+ .+.+++.-+..
T Consensus 9 ~l~~G~v~vVPq~~~v~~~A~~---~le~v~F~tna 41 (93)
T 1dgw_Y 9 TLSEGDIIVIPSSFPVALKAAS---DLNMVGIGVNA 41 (93)
T ss_dssp EECTTCEEEECTTCCEEEEESS---SEEEEEEEESC
T ss_pred eecCCcEEEECCCCceeEEecC---CeEEEEEEecC
Confidence 7899999999999999888863 39999985444
No 208
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=72.47 E-value=28 Score=26.15 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=57.3
Q ss_pred cCCCCcEEEEEEeeccCCceeEEEEEEEECCCCcCCceec-CCcEEEEEEeCE-EEEEE-CCeeeecCCCCCceeee---
Q 029565 46 YGREGLAHITVAGSILHGMKEIEVWLQTFSPGTRTPIHRH-SCEEIFIVLKGS-GTLYL-ASSSHEKHPGKPQEHFF--- 119 (191)
Q Consensus 46 ~~~~G~~~~~~~~~~~~g~~~~~~~~~~i~PG~~~~~H~H-~~eE~~~Vl~G~-~~v~i-~~~~~~l~~gk~~d~~l--- 119 (191)
...+|..+.+.++....+-......+.-+.+|..+..|+= ..+|+++-..|. +++.+ ++. |..+++.+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~d------g~~~~~~LG~d 92 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERGHSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDG------REVQTFTLGPA 92 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTCSCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSS------SCCEEEEESSC
T ss_pred CCCCccEEEEEeCCCCCCCcceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCC------CcEEEEEeCCC
Confidence 4445655555554321111112333444667777778886 789999999887 55544 221 11122333
Q ss_pred -cCCeE--EEECCCCcEEEEeCCCCCcEEEEEEEeCCCc
Q 029565 120 -FANST--FHIPVNDAHQVWNTNENEDLQMLVVISRPPV 155 (191)
Q Consensus 120 -~~GD~--v~ip~g~~H~~~N~g~~e~~~~l~v~~~p~~ 155 (191)
..|+. ++||+|.+..-+..++ -.++...-.|.+
T Consensus 93 ~~~Ge~pQ~vVP~G~WqaA~~~g~---~~LVsCtVaPGF 128 (154)
T 1znp_A 93 ILEGERPQVIVPANCWQSAESLGD---FTLVGCTVSPGF 128 (154)
T ss_dssp TTTTEESEEEECTTCEEEEEESSS---EEEEEEEESSCC
T ss_pred cccCcccEEEEcCCEEEEeeECCC---eEEEEEEecCCC
Confidence 34543 7899999998887643 344444444555
No 209
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=72.41 E-value=22 Score=26.62 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=39.5
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE--CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL--ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLV 148 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i--~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~ 148 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+-. ...+.+...+ +++++.
T Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~-------~~~~~G~~~G~--~~~~~~~A~~---~~~v~~ 96 (220)
T 2fmy_A 29 EQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTL-------AILEAGDIFCT--HTRAFIQAME---DTTILY 96 (220)
T ss_dssp EEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEE-------EEEETTCEEES--CSSSEEEESS---SEEEEE
T ss_pred eeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEE-------EEcCCCCEeCC--ccceEEEEcC---cEEEEE
Confidence 34455655432222235679999999999853 3444333 26788987655 3344555543 466666
Q ss_pred EE
Q 029565 149 VI 150 (191)
Q Consensus 149 v~ 150 (191)
+-
T Consensus 97 i~ 98 (220)
T 2fmy_A 97 TD 98 (220)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 210
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=72.15 E-value=8.2 Score=29.32 Aligned_cols=49 Identities=12% Similarity=0.090 Sum_probs=31.8
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
....+++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 30 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~g~~~ 81 (231)
T 3e97_A 30 TERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVL-------GDIYAPGVV 81 (231)
T ss_dssp EEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEE-------EEEESSEEE
T ss_pred EEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEE-------EecCCCCEE
Confidence 456678887654333346779999999999864 3333333 267888875
No 211
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=72.11 E-value=2.3 Score=38.32 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=22.8
Q ss_pred eeeecCCeEEEECCCCcEEEEeCCC
Q 029565 116 EHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 116 d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
.+.+.||+++++|+|-.|.+.|..+
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCCC
Confidence 4789999999999999999999865
No 212
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=71.93 E-value=7.5 Score=29.43 Aligned_cols=69 Identities=9% Similarity=0.137 Sum_probs=37.8
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEE-----CCCCcEEEEeCCCCCc
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHI-----PVNDAHQVWNTNENED 143 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~i-----p~g~~H~~~N~g~~e~ 143 (191)
..+++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+-. .....+.+...+ +
T Consensus 32 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~G~~~G~~~~~~~~~~~~~~~A~~---~ 101 (227)
T 3d0s_A 32 VDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLL-------TIMGPSDMFGELSIFDPGPRTSSATTIT---E 101 (227)
T ss_dssp EEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEE-------EEECTTCEESCHHHHSCSCCSSEEEESS---C
T ss_pred EEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEE-------EEecCCCEEeeHHHcCCCCceeEEEEcc---c
Confidence 4455555432222235669999999999865 3444333 26778887521 112233455543 4
Q ss_pred EEEEEEE
Q 029565 144 LQMLVVI 150 (191)
Q Consensus 144 ~~~l~v~ 150 (191)
++++.+-
T Consensus 102 ~~v~~i~ 108 (227)
T 3d0s_A 102 VRAVSMD 108 (227)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5666553
No 213
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=71.74 E-value=6.4 Score=31.36 Aligned_cols=46 Identities=4% Similarity=-0.002 Sum_probs=32.0
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..-...+.+++|++|.+.+..++... ..+.+||.+
T Consensus 64 ~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~g~~~---------~~~~~G~~f 109 (299)
T 3shr_A 64 PVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKL---------CTMGPGKVF 109 (299)
T ss_dssp EEEECTTCEEECTTCBCCCEEEEEESCEEEEETTEEE---------EEECTTCEE
T ss_pred eEEECCCCEEEcCCCcCceEEEEEEEEEEEEECCEEE---------EEeCCCCee
Confidence 4567777654333334677999999999998888642 367788865
No 214
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=71.28 E-value=5.9 Score=29.45 Aligned_cols=32 Identities=6% Similarity=0.082 Sum_probs=22.0
Q ss_pred CcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 87 CEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 87 ~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~G~~~ 51 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITL-------RHVLPGDYF 51 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEE-------EEECTTCEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEE-------EEecCCCEe
Confidence 4569999999999864 3443333 256788865
No 215
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=71.20 E-value=5.8 Score=30.47 Aligned_cols=71 Identities=10% Similarity=0.066 Sum_probs=40.0
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEEC---CC---CcEEEEeCCC
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIP---VN---DAHQVWNTNE 140 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip---~g---~~H~~~N~g~ 140 (191)
...++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+=.. .+ ..+.+...+
T Consensus 44 ~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l-------~~~~~G~~fG~~~~~~~~~~~~~~~~A~~- 115 (232)
T 1zyb_A 44 HFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVI-------EQIEAPYLIEPQSLFGMNTNYASSYVAHT- 115 (232)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEE-------EEEESSEEECGGGGSSSCCBCSSEEEESS-
T ss_pred EEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEE-------EEccCCCeeeehHHhCCCCCCceEEEEcc-
Confidence 345566666543222235679999999999864 2333322 256788875211 12 344555543
Q ss_pred CCcEEEEEEE
Q 029565 141 NEDLQMLVVI 150 (191)
Q Consensus 141 ~e~~~~l~v~ 150 (191)
+++++.+-
T Consensus 116 --~~~v~~i~ 123 (232)
T 1zyb_A 116 --EVHTVCIS 123 (232)
T ss_dssp --CEEEEEEE
T ss_pred --ceEEEEEE
Confidence 46666653
No 216
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=70.10 E-value=10 Score=28.10 Aligned_cols=48 Identities=17% Similarity=0.367 Sum_probs=29.6
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 15 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~-------~~~~~g~~~ 65 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMII-------GYLNSGDFF 65 (207)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEE-------EEEETTCEE
T ss_pred eEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEE-------EEcCCCCCc
Confidence 44566666542222225679999999999864 2344333 267788876
No 217
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=69.67 E-value=5.3 Score=27.58 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=28.5
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
..++++|...-..-.+.+.+++|++|.+.+...+. ..+.+||.+
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~-----------~~~~~G~~~ 79 (138)
T 1vp6_A 36 ARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP-----------VELGPGAFF 79 (138)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEECSSSC-----------EEECTTCEE
T ss_pred EEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCCc-----------ceECCCCEe
Confidence 44566666543222335679999999999976552 256777764
No 218
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=68.43 E-value=8 Score=28.78 Aligned_cols=70 Identities=7% Similarity=0.116 Sum_probs=39.0
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEEC----CC--CcEEEEeCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIP----VN--DAHQVWNTNEN 141 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip----~g--~~H~~~N~g~~ 141 (191)
...+++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+-.. .+ ..+.+...+
T Consensus 21 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~-------~~~~~g~~~G~~~~~~~~~~~~~~~~a~~-- 91 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMIL-------SYLNQGDFIGELGLFEEGQERSAWVRAKT-- 91 (210)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEE-------EEEETTCEESCTTTTSTTCBCSSEEEESS--
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEE-------EEcCCCCEeeeHHHhcCCCCceEEEEECC--
Confidence 34566665432222225679999999999864 2343333 257888876321 11 233445443
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
+++++.+-
T Consensus 92 -~~~v~~i~ 99 (210)
T 3ryp_A 92 -ACEVAEIS 99 (210)
T ss_dssp -CEEEEEEE
T ss_pred -cEEEEEEc
Confidence 46666653
No 219
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=68.37 E-value=7.9 Score=29.24 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=39.5
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEE----ECC--CCcEEEEeCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFH----IPV--NDAHQVWNTNEN 141 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~----ip~--g~~H~~~N~g~~ 141 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+- +.. ...+.+...+
T Consensus 24 ~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~-------~~~~~G~~~G~~~~~~~~~~~~~~~~A~~-- 94 (213)
T 1o5l_A 24 VIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEI-------DEIKPVQIIASGFIFSSEPRFPVNVVAGE-- 94 (213)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEE-------EEECSSEESSGGGTTSSSCBCSSEEEESS--
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEE-------EEecCCCEeeeHHHhcCCCCceEEEEEcc--
Confidence 44566666543222235679999999999864 3444333 2577888652 111 2344555543
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
+++++.+-
T Consensus 95 -~~~v~~i~ 102 (213)
T 1o5l_A 95 -NSKILSIP 102 (213)
T ss_dssp -SEEEEEEE
T ss_pred -ceEEEEEe
Confidence 46666653
No 220
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=67.32 E-value=7.9 Score=28.85 Aligned_cols=68 Identities=12% Similarity=0.069 Sum_probs=37.8
Q ss_pred EEECCCCcCCceecCC--cEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEE----CCCCcEEEEeCCCCC
Q 029565 72 QTFSPGTRTPIHRHSC--EEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHI----PVNDAHQVWNTNENE 142 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~--eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~i----p~g~~H~~~N~g~~e 142 (191)
..+++|...-..-.+. +.+++|++|.+.+.. +|+...+ ..+.+||.+-. .....+.+...+
T Consensus 8 ~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~-------~~~~~g~~~G~~~l~~~~~~~~~~A~~--- 77 (202)
T 2zcw_A 8 VSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTL-------RLVRPGGFFGEEALFGQERIYFAEAAT--- 77 (202)
T ss_dssp EEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEE-------EEECTTCEECTHHHHTCCBCSEEEESS---
T ss_pred EEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEE-------EEecCCCEeeehhcCCCCcceEEEEcc---
Confidence 4466665442222334 568999999999864 3444333 25778886532 112233444443
Q ss_pred cEEEEEE
Q 029565 143 DLQMLVV 149 (191)
Q Consensus 143 ~~~~l~v 149 (191)
+++++.+
T Consensus 78 ~~~v~~i 84 (202)
T 2zcw_A 78 DVRLEPL 84 (202)
T ss_dssp CEEEEEC
T ss_pred cEEEEEE
Confidence 4566665
No 221
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=67.32 E-value=7 Score=29.15 Aligned_cols=48 Identities=13% Similarity=0.190 Sum_probs=29.8
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
....++||...-..-...+.+++|++|.+.+...+.. .+ ..+.+||.+
T Consensus 95 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~-~~-------~~l~~G~~f 142 (198)
T 2ptm_A 95 EFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGV-IA-------TSLSDGSYF 142 (198)
T ss_dssp EEEEECTTCEEECTTSCCSEEEEEEECCEEEECTTSC-EE-------EEECTTCEE
T ss_pred cceeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCe-EE-------EEecCCCEe
Confidence 3455777765422222356799999999999863322 11 367788865
No 222
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=67.20 E-value=7.4 Score=29.61 Aligned_cols=71 Identities=7% Similarity=0.028 Sum_probs=38.9
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEE-----CCCCcEEEEeCCCC
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHI-----PVNDAHQVWNTNEN 141 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~i-----p~g~~H~~~N~g~~ 141 (191)
...++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+=. .....+.+...+
T Consensus 34 ~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~-------~~~~~G~~~G~~~~~~~~~~~~~~~A~~-- 104 (232)
T 2gau_A 34 QPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHIS-------RIVKPGQFFGMRPYFAEETCSSTAIAVE-- 104 (232)
T ss_dssp EEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEE-------EEECTTCEESHHHHHHTSCCSSEEEESS--
T ss_pred eEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEE-------EEeCCCCEeeeehhhCCCCcceEEEEec--
Confidence 345567776543222235679999999999863 3433322 26778886521 112344555543
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
+++++.+-
T Consensus 105 -~~~v~~i~ 112 (232)
T 2gau_A 105 -NSKVLAIP 112 (232)
T ss_dssp -CEEEEEEE
T ss_pred -ceEEEEEE
Confidence 45666553
No 223
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=66.97 E-value=9.6 Score=29.45 Aligned_cols=49 Identities=22% Similarity=0.305 Sum_probs=31.1
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...++++|...-..--+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 44 ~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l-------~~~~~g~~~ 95 (243)
T 3la7_A 44 VVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITV-------ALLRENSVF 95 (243)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEE-------EEECTTCEE
T ss_pred eeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEE-------EEecCCCEE
Confidence 355677776543222235679999999999864 2344333 267788865
No 224
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=66.37 E-value=12 Score=27.69 Aligned_cols=48 Identities=6% Similarity=0.003 Sum_probs=29.7
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
..++++|...-..-.+.+.+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 64 ~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~-------~~~~~G~~f 114 (187)
T 3gyd_A 64 CYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTI-------AKVGAGAII 114 (187)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEE-------EEEETTCEE
T ss_pred EEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEE-------EEccCCCee
Confidence 44566666543222335679999999999864 3333333 267788865
No 225
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=63.44 E-value=10 Score=29.67 Aligned_cols=49 Identities=8% Similarity=0.219 Sum_probs=31.7
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...++++|...-..-.+...+++|++|.+.+.. +|+...+ ..+.+||.+
T Consensus 70 ~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~-------~~~~~G~~~ 121 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMIL-------SYLNQGDFI 121 (260)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEE-------EEEETTCEE
T ss_pred EEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEE-------EEcCCCCEE
Confidence 355677777543222235679999999999864 3443333 367888876
No 226
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=62.65 E-value=6.3 Score=27.28 Aligned_cols=46 Identities=15% Similarity=0.348 Sum_probs=26.9
Q ss_pred EEEEC-CCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFS-PGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~-PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
..+++ +|...-..-...+.+++|++|.+.+...+ |+. ..+.+||.+
T Consensus 41 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-------g~~--~~l~~G~~f 87 (134)
T 2d93_A 41 FEVVEQAGAIILEDGQELDSWYVILNGTVEISHPD-------GKV--ENLFMGNSF 87 (134)
T ss_dssp EEEECSSSCEEECTTCEECEEEECCBSCEEEECSS-------SCE--EEECTTCEE
T ss_pred EEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCC-------CcE--EEecCCCcc
Confidence 34455 55543211112456899999999998532 221 357788865
No 227
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=59.77 E-value=16 Score=28.15 Aligned_cols=69 Identities=12% Similarity=0.135 Sum_probs=36.7
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEE--ECCCCcEEEEeCCCCCcEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFH--IPVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~--ip~g~~H~~~N~g~~e~~~ 145 (191)
...+++|...-..-.+...+++|++|.+.+.. +|+...+ ..+.+||.+- +.....+.+...+ +++
T Consensus 34 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~-------~~~~~G~~~G~~l~~~~~~~~~A~~---~~~ 103 (250)
T 3e6c_C 34 IRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLL-------YYAGGNSLIGKLYPTGNNIYATAME---PTR 103 (250)
T ss_dssp EEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEE-------EEECTTCEECCCSCCSCCEEEEESS---SEE
T ss_pred EEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEE-------EEecCCCEEeeecCCCCceEEEEcc---cEE
Confidence 34466665432222234669999999999864 2343333 2566777652 2212334444433 455
Q ss_pred EEEE
Q 029565 146 MLVV 149 (191)
Q Consensus 146 ~l~v 149 (191)
++.+
T Consensus 104 v~~i 107 (250)
T 3e6c_C 104 TCWF 107 (250)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 228
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=58.41 E-value=5.1 Score=30.29 Aligned_cols=48 Identities=10% Similarity=0.172 Sum_probs=28.3
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEEEC---CeeeecCCCCCceeeecCCeEEE
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA---SSSHEKHPGKPQEHFFFANSTFH 126 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~---~~~~~l~~gk~~d~~l~~GD~v~ 126 (191)
.++++|...-..-.+.+.+++|++|.+.+... |+...+ ..+.+||.+-
T Consensus 35 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~-------~~~~~g~~~G 85 (227)
T 3dkw_A 35 VNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKIL-------EVTNERNTFA 85 (227)
T ss_dssp EECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCC-------CEECTTEEES
T ss_pred EEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEE-------EEcCCCCEee
Confidence 34555544322222356699999999998652 333322 2677888763
No 229
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=57.34 E-value=62 Score=24.67 Aligned_cols=64 Identities=14% Similarity=0.170 Sum_probs=40.9
Q ss_pred EEEEEEECCCCcCCceecCCcEEEEEEeCEE-EEEE-CCeeeecCCCCCceeee----cCCe---EEEECCCCcEEEEe
Q 029565 68 EVWLQTFSPGTRTPIHRHSCEEIFIVLKGSG-TLYL-ASSSHEKHPGKPQEHFF----FANS---TFHIPVNDAHQVWN 137 (191)
Q Consensus 68 ~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~-~v~i-~~~~~~l~~gk~~d~~l----~~GD---~v~ip~g~~H~~~N 137 (191)
...+.-+.+|..+.+|+=..+|+++-..|.. ++.+ +.. |+.+.+.+ ..|+ -++||+|.+..-+.
T Consensus 54 TaIYfLL~~~~~S~~HRv~sdEiW~~~~G~pL~l~~~~~d------G~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 54 TMIYYLMQAGQPDPFHRVKSDETFVHNLGGSMKIHMIHPD------GSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp EEEEEEEETTCCEEEEECSSEEEEEEEEESCEEEEEECTT------SCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred eEEEEEEcCCCCccCEEecCCEEEEEEcCCCEEEEEEcCC------CceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 3445557777755556555899999999964 5543 221 22222333 3455 57899999998887
No 230
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=56.76 E-value=9.3 Score=32.16 Aligned_cols=48 Identities=13% Similarity=0.220 Sum_probs=35.1
Q ss_pred EEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 69 VWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 69 ~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
+....+++|...-..-...+.+++|++|.+.+..+++.. ..+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~v---------~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYVNGEWV---------TNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEETTEEE---------EEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEECCeEe---------eeCCCCCEE
Confidence 456778888766444444778999999999999988653 356777764
No 231
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=56.69 E-value=7.2 Score=33.09 Aligned_cols=22 Identities=18% Similarity=-0.006 Sum_probs=20.3
Q ss_pred ecCCeEEEECCCCcEEEEeCCC
Q 029565 119 FFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 119 l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
=+|||.|++++|..|+..|.|-
T Consensus 283 QkpGd~Vi~~PgayH~v~n~G~ 304 (332)
T 2xxz_A 283 QRPGDLVWINAGTVHWVQATGW 304 (332)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEECCCceEEEEecce
Confidence 3699999999999999999986
No 232
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=56.09 E-value=74 Score=25.35 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=32.4
Q ss_pred CccCCCCcEEEEEEeecc-----CCcee-EEEEEEEECCCCcCCceecCCcEEEEEEeCEE-EEE
Q 029565 44 DNYGREGLAHITVAGSIL-----HGMKE-IEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSG-TLY 101 (191)
Q Consensus 44 ~~~~~~G~~~~~~~~~~~-----~g~~~-~~~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~-~v~ 101 (191)
.....+|....+.++... .+.+. ....+.-+.+|..+.+|+=..+|+++-..|.. ++.
T Consensus 31 ~PHPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~S~~HRv~sdEiW~~h~G~pL~l~ 95 (225)
T 3m3i_A 31 VPHPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESPSHLHRLCSDETWMYHAGDPLQLH 95 (225)
T ss_dssp EECTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSCEEEEECSSEEEEEEEEESCEEEE
T ss_pred ccCCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCCcccEEecCCEEEEEECCCCEEEE
Confidence 334455655555544211 22222 23444557777754455545899999999985 453
No 233
>1skh_A Major prion protein 2; coil-helix-coil, unknown function; NMR {Bos taurus}
Probab=55.18 E-value=7.9 Score=21.05 Aligned_cols=30 Identities=27% Similarity=0.282 Sum_probs=15.9
Q ss_pred CCceehhHHHHHHHHhhhccccccCcCcccCCC
Q 029565 1 MARSWLIFLCLSFILLSANIEADASHCSIKGFP 33 (191)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (191)
|+|..+-|-+|+ |+-|+| +|-.-|.++|.|
T Consensus 1 M~k~~~~cwilv--Lfva~w-sdvglcKKr~Kp 30 (30)
T 1skh_A 1 MVKSKIGSWILV--LFVAMW-SDVGLCKKRPKP 30 (30)
T ss_dssp CCTTTTTTHHHH--HHHHHH-HHHTTSSSCCCC
T ss_pred CCcccccHHHHH--HHHHHH-hHHHHhhcCCCC
Confidence 777765444433 233332 345567776654
No 234
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=54.28 E-value=21 Score=26.95 Aligned_cols=47 Identities=11% Similarity=0.177 Sum_probs=30.5
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..--..+.+++|++|++.+...+.. .+ ..+.+||.+
T Consensus 150 ~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~-~~-------~~l~~g~~f 196 (246)
T 3of1_A 150 TKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQG-VI-------NKLKDHDYF 196 (246)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTE-EE-------EEEETTCEE
T ss_pred eEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCc-eE-------EEcCCCCcc
Confidence 455677665422222357799999999999887653 11 367788865
No 235
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=51.97 E-value=28 Score=27.79 Aligned_cols=51 Identities=12% Similarity=0.100 Sum_probs=31.4
Q ss_pred eeeecCCeEEEECCCCcEEEE-eCCCCCcEEEEEEEeCCCceeeecCCCCCc
Q 029565 116 EHFFFANSTFHIPVNDAHQVW-NTNENEDLQMLVVISRPPVKVFIYEDWSMP 166 (191)
Q Consensus 116 d~~l~~GD~v~ip~g~~H~~~-N~g~~e~~~~l~v~~~p~~~~~~~~~w~~~ 166 (191)
...+++||++++.+...|+-. |.++..-..+..-+.......+....|+.+
T Consensus 229 ~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~~l~~ 280 (291)
T 2opw_A 229 PTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQP 280 (291)
T ss_dssp EECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECTTCEECTTSSCCC
T ss_pred ecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCCCCccCccccccC
Confidence 367899999999999999864 766521122222223332224455678765
No 236
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=51.40 E-value=31 Score=26.93 Aligned_cols=37 Identities=5% Similarity=0.009 Sum_probs=28.4
Q ss_pred CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCc
Q 029565 87 CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDA 132 (191)
Q Consensus 87 ~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~ 132 (191)
..-++|+++|+..+.+++.. .+.+.+||++++.....
T Consensus 140 ~~~~v~~l~G~~~v~~~~~~---------~~~L~~~d~l~~~~~~~ 176 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQGQP---------RGQLAAHDCLCAEGLQG 176 (200)
T ss_dssp SEEEEEESSSCEEEEETTEE---------EEEECTTCEEEEESCCS
T ss_pred CEEEEEEccCcEEEEcCCCc---------eeecCCCCEEEEeCCCc
Confidence 45689999999999887533 15788999999976543
No 237
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=50.53 E-value=16 Score=27.92 Aligned_cols=69 Identities=9% Similarity=0.052 Sum_probs=37.4
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEECC---CC----cEEEEeCCCC
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIPV---ND----AHQVWNTNEN 141 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip~---g~----~H~~~N~g~~ 141 (191)
.++++|...-..-.+.+.+++|++|.+.+.. +|+...+. .+ +||.+-..+ +. .+......
T Consensus 21 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~-------~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-- 90 (238)
T 2bgc_A 21 KQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQ-------YY-KGAFVIMSGFIDTETSVGYYNLEVIS-- 90 (238)
T ss_dssp EEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEE-------EE-ESSEEEESBCTTTCCBSCCCEEEECS--
T ss_pred EEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEE-------Ec-CCCEecchhhhcCCCcCcceeEEEEE--
Confidence 3455555432111224668999999999864 33433331 34 888764432 22 45555543
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
++++++.+-
T Consensus 91 ~~~~v~~i~ 99 (238)
T 2bgc_A 91 EQATAYVIK 99 (238)
T ss_dssp SEEEEEEEE
T ss_pred cceEEEEEe
Confidence 256666553
No 238
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=50.26 E-value=28 Score=27.20 Aligned_cols=49 Identities=20% Similarity=0.278 Sum_probs=30.1
Q ss_pred EEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC---C-eeeecCCCCCceeeecCCeEE
Q 029565 70 WLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA---S-SSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 70 ~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~---~-~~~~l~~gk~~d~~l~~GD~v 125 (191)
....+++|...-..-.+.+.+++|++|++.+... + +...+ ..+.+||.+
T Consensus 181 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~-------~~l~~G~~f 233 (291)
T 2qcs_B 181 EPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEV-------GRLGPSDYF 233 (291)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEE-------EEECTTCEE
T ss_pred EEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEE-------EEeCCCCEe
Confidence 3455777765433333357799999999999742 2 22222 367788865
No 239
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=44.81 E-value=14 Score=33.38 Aligned_cols=23 Identities=13% Similarity=-0.036 Sum_probs=20.8
Q ss_pred eecCCeEEEECCCCcEEEEeCCC
Q 029565 118 FFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 118 ~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
.=+|||.|++++|..|+..|.|-
T Consensus 341 vQkpGd~Vi~~PgayH~v~n~G~ 363 (531)
T 3avr_A 341 IQRPGDLVWINAGTVHWVQAIGW 363 (531)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEECCCceEEEEecce
Confidence 34699999999999999999986
No 240
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=42.97 E-value=37 Score=29.09 Aligned_cols=98 Identities=14% Similarity=0.244 Sum_probs=58.6
Q ss_pred EEEEEECCCCcCCc-eecCCcEEEEEEeCEEEE--EECCe-----eeecCCCCCceeeecCCeEEEECCCCcEEEEeCCC
Q 029565 69 VWLQTFSPGTRTPI-HRHSCEEIFIVLKGSGTL--YLASS-----SHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 69 ~~~~~i~PG~~~~~-H~H~~eE~~~Vl~G~~~v--~i~~~-----~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
+..-.+-|....+. ..-+-+-...|--|-+.+ +++++ +..+.+|...+ .+-.||+++-|+..+|.+.-.++
T Consensus 111 v~ld~lcpad~~~~~~~~~l~~~~~~~~~p~~~~~~~g~~l~~~twr~l~~~~~~~-~w~~gdsyveps~cphty~l~~d 189 (443)
T 3g7d_A 111 VVLDILCPSDRLPALNNGHLEPAITVNLGPGDINGRWGEEITPQTWRVLHANHGGD-RWITGDSYVEPSYCPHSYSLAGD 189 (443)
T ss_dssp EEEEECSCTTSCCCCCCCCSSCEEEEEEEESCEEEECSSSCCTTTEEEECBCCSSC-TTSCBCEEEECTTCCCEEEESSS
T ss_pred eeeeccCcccccchhcCCCCCcccccCCCCCCCCCcccCccChhhheeeccCCCCC-ccccCCcccccccCCcccccccC
Confidence 33444556665553 222234445555444443 44442 23334433333 55669999999999999999999
Q ss_pred CCcEEEEEEEeCCCceeee--cCCCCCccc
Q 029565 141 NEDLQMLVVISRPPVKVFI--YEDWSMPHT 168 (191)
Q Consensus 141 ~e~~~~l~v~~~p~~~~~~--~~~w~~~~~ 168 (191)
.|++++.-.....+...+ -..|+.+..
T Consensus 190 -~parivsyt~~s~l~~l~~e~n~w~~~a~ 218 (443)
T 3g7d_A 190 -APARIVSYTAQSNISPLMTEANNWSTGAF 218 (443)
T ss_dssp -SCEEEEEEECCCTTHHHHHHHTTSCHHHH
T ss_pred -CchheEeeccccchHHHHHhhcccccHHH
Confidence 599999887766664311 246765443
No 241
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=42.33 E-value=36 Score=28.91 Aligned_cols=71 Identities=10% Similarity=0.134 Sum_probs=41.5
Q ss_pred EEEEEECCCCcCCceecCCcEEEEEEeCEEEEEEC--CeeeecCCCCCceeeecCCeEEEE---CCCC--cEEEEeCCCC
Q 029565 69 VWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA--SSSHEKHPGKPQEHFFFANSTFHI---PVND--AHQVWNTNEN 141 (191)
Q Consensus 69 ~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~--~~~~~l~~gk~~d~~l~~GD~v~i---p~g~--~H~~~N~g~~ 141 (191)
+....+++|...-..-...+.+++|++|.+.+... |+...+ ..+.+||++=- =.+. .+.+...+
T Consensus 168 ~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v-------~~l~~G~~fGe~all~~~pr~atv~A~~-- 238 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCV-------GNYDNRGSFGELALMYNTPKAATITATS-- 238 (416)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEE-------EEEESCCEECGGGGTSCCCCSSEEEESS--
T ss_pred cEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEE-------EEecCCCEEeeHHHhcCCCcccEEEEcc--
Confidence 34567888876543334467899999999998763 222222 25778885421 0123 33555543
Q ss_pred CcEEEEEE
Q 029565 142 EDLQMLVV 149 (191)
Q Consensus 142 e~~~~l~v 149 (191)
++.++.+
T Consensus 239 -d~~l~~i 245 (416)
T 3tnp_B 239 -PGALWGL 245 (416)
T ss_dssp -SEEEEEE
T ss_pred -CeEEEEE
Confidence 4555555
No 242
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=41.49 E-value=25 Score=28.28 Aligned_cols=71 Identities=8% Similarity=-0.000 Sum_probs=36.8
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEE----E-CCCCcEEEEeCCCCCcEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFH----I-PVNDAHQVWNTNENEDLQ 145 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~----i-p~g~~H~~~N~g~~e~~~ 145 (191)
...+++|...=..-.+.+.+++|++|.+.+...+.. |+..-..+.+||.+= + ..-..+.+...+ ++.
T Consensus 38 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~-----g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~---~~~ 109 (333)
T 4ava_A 38 PLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDD-----GVAIIARALPGMIVGEIALLRDSPRSATVTTIE---PLT 109 (333)
T ss_dssp EEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTT-----CCEEEEEECTTCEESHHHHHHTCBCSSEEEESS---CEE
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCC-----CcEEEEEecCCCEeeHHHhcCCCCceEEEEEec---CEE
Confidence 344666654322212246699999999999653211 111113677888751 1 122334555543 456
Q ss_pred EEEE
Q 029565 146 MLVV 149 (191)
Q Consensus 146 ~l~v 149 (191)
++.+
T Consensus 110 ~~~i 113 (333)
T 4ava_A 110 GWTG 113 (333)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 243
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=40.71 E-value=18 Score=32.48 Aligned_cols=23 Identities=17% Similarity=-0.004 Sum_probs=20.7
Q ss_pred eecCCeEEEECCCCcEEEEeCCC
Q 029565 118 FFFANSTFHIPVNDAHQVWNTNE 140 (191)
Q Consensus 118 ~l~~GD~v~ip~g~~H~~~N~g~ 140 (191)
.=+|||.|++++|..|++.|.|-
T Consensus 316 iQkPGdfVit~PgtyH~Vqs~Gf 338 (510)
T 4ask_A 316 VQRPGDLVWINAGTVHWVQATGW 338 (510)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEECCCceEEEEecCe
Confidence 34699999999999999999986
No 244
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=40.54 E-value=8.4 Score=26.54 Aligned_cols=16 Identities=13% Similarity=0.335 Sum_probs=13.1
Q ss_pred CcEEEEEEeCEEEEEE
Q 029565 87 CEEIFIVLKGSGTLYL 102 (191)
Q Consensus 87 ~eE~~~Vl~G~~~v~i 102 (191)
.+.+++|++|.+.+..
T Consensus 47 ~~~~y~i~~G~v~~~~ 62 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVT 62 (137)
T ss_dssp CSEEEEEEECCCEEEC
T ss_pred CCeEEEEEeeEEEEEE
Confidence 4568999999999764
No 245
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=40.35 E-value=39 Score=26.60 Aligned_cols=48 Identities=13% Similarity=0.076 Sum_probs=29.0
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECC----eeeecCCCCCceeeecCCeEE
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLAS----SSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~----~~~~l~~gk~~d~~l~~GD~v 125 (191)
...+++|...-..-...+.+++|++|++.+...+ +...+ ..+.+||.+
T Consensus 182 ~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~-------~~l~~G~~f 233 (299)
T 3shr_A 182 ETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFL-------RTLGKGDWF 233 (299)
T ss_dssp EEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEE-------EEEETTCEE
T ss_pred EEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEE-------EEcCCCCEe
Confidence 4456666543222223567999999999997654 22222 257788865
No 246
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=38.13 E-value=44 Score=31.79 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=24.7
Q ss_pred EEEEEECCCCcCCceecCCcEEEEEEeCEEEEEECC
Q 029565 69 VWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLAS 104 (191)
Q Consensus 69 ~~~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~ 104 (191)
+....+++|...=..-..++.+++|++|++.+.+.+
T Consensus 65 m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~ 100 (999)
T 4f7z_A 65 GYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSE 100 (999)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECS
T ss_pred eEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEec
Confidence 344556666654333344678999999999999854
No 247
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=37.82 E-value=76 Score=24.12 Aligned_cols=69 Identities=20% Similarity=0.125 Sum_probs=44.8
Q ss_pred CceecC-CcEEEEEEeCEEE-EEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEE
Q 029565 81 PIHRHS-CEEIFIVLKGSGT-LYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVI 150 (191)
Q Consensus 81 ~~H~H~-~eE~~~Vl~G~~~-v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~ 150 (191)
...+|+ ..|.++-+.|..- +.+....-.....+.+-|.+.+|..|.+.+|+||...-.-+ ++..|+++.
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~-~~~dF~vvd 142 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIE-KRDDFLVVD 142 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESS-SEEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCC-CCceEEEEE
Confidence 367899 7899999998753 33321110011123445788999999999999997644444 356777664
No 248
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.86 E-value=60 Score=27.37 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=31.1
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEE
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTF 125 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v 125 (191)
..+++|...-..-...+.+++|++|++.+...++. .+ ..+.+||.+
T Consensus 364 ~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~-~~-------~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKG-VV-------CTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSCCCEEEEEEESEEEEEETTTE-EE-------EEEETTCEE
T ss_pred eEecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCe-eE-------EEecCCCEE
Confidence 35777765433333467799999999999887642 11 367788865
No 249
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=33.04 E-value=55 Score=27.64 Aligned_cols=70 Identities=13% Similarity=0.128 Sum_probs=39.0
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEECCee-----eecCCCCCceeeecCCeEEEECC--CC--cEEEEeCCCC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSS-----HEKHPGKPQEHFFFANSTFHIPV--ND--AHQVWNTNEN 141 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~-----~~l~~gk~~d~~l~~GD~v~ip~--g~--~H~~~N~g~~ 141 (191)
...+++|...-..-...+.+++|++|.+.+...+.. ..+ ..+.+||++=-.+ +. .+.+...+
T Consensus 67 ~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~-------~~~~~G~~fGe~~l~~~~~~~tv~A~~-- 137 (469)
T 1o7f_A 67 YENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTI-------CTLGIGTAFGESILDNTPRHATIVTRE-- 137 (469)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEE-------EEECTTCEECGGGGGTCBCSSEEEESS--
T ss_pred EEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEE-------EEccCCCCcchhhhCCCCccceEEEcc--
Confidence 446777665422222356799999999999764321 122 3677888653211 22 33455543
Q ss_pred CcEEEEEEE
Q 029565 142 EDLQMLVVI 150 (191)
Q Consensus 142 e~~~~l~v~ 150 (191)
++.++.+-
T Consensus 138 -~~~l~~i~ 145 (469)
T 1o7f_A 138 -SSELLRIE 145 (469)
T ss_dssp -SEEEEEEE
T ss_pred -ceeEEEEc
Confidence 45666553
No 250
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=30.51 E-value=52 Score=26.46 Aligned_cols=23 Identities=9% Similarity=-0.188 Sum_probs=19.7
Q ss_pred eeeecCCeEEEECCCCcEEE-EeC
Q 029565 116 EHFFFANSTFHIPVNDAHQV-WNT 138 (191)
Q Consensus 116 d~~l~~GD~v~ip~g~~H~~-~N~ 138 (191)
...+++||++++.+...|+- .|.
T Consensus 221 ~~~~~aGd~v~f~~~l~H~s~~N~ 244 (313)
T 2fct_A 221 PMQMKAGQFIIFWSTLMHASYPHS 244 (313)
T ss_dssp EECBCTTEEEEEETTSEEEECCBC
T ss_pred EeeeCCceEEEEeCCceeeCCCCC
Confidence 36789999999999999975 566
No 251
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=30.46 E-value=56 Score=27.70 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=21.6
Q ss_pred EEEECCCCcCCceecCCcEEEEEEeCEEEEEEC
Q 029565 71 LQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLA 103 (191)
Q Consensus 71 ~~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~ 103 (191)
...+++|...-..-...+.+++|++|++.+...
T Consensus 292 ~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~ 324 (416)
T 3tnp_B 292 TKVYNDGEQIIAQGDLADSFFIVESGEVKITMK 324 (416)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEECC
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEe
Confidence 445666654322222357799999999999754
No 252
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=28.58 E-value=1.9e+02 Score=21.71 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=48.6
Q ss_pred EEEEEEECCCC----cCCceecC-CcEEEEEEeCEEEEEE---CCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCC
Q 029565 68 EVWLQTFSPGT----RTPIHRHS-CEEIFIVLKGSGTLYL---ASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTN 139 (191)
Q Consensus 68 ~~~~~~i~PG~----~~~~H~H~-~eE~~~Vl~G~~~v~i---~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g 139 (191)
.+......|.. .....+|+ ..|.++-+.|..-+.+ ++.. ....+.+-|.+.+|..|.+.+|+||...-.-
T Consensus 53 ~i~ifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~--Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l 130 (168)
T 1xsq_A 53 LISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDK--PDLSTLRAFITNGEQGVNYHRNVWHHPLFAW 130 (168)
T ss_dssp EEEEEEECBCCSSCEEEEEEECTTBCEEEEESBCCCCEEEEEECSSS--CEEEEEEEEECCSSCEEEECTTCEECCCCBS
T ss_pred EEEEEEecCCCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCC--CChhheEEEEecCCeEEEeCCCceecccccC
Confidence 44444455541 12357899 7888888888754332 2110 0001122378889999999999999965444
Q ss_pred CCCcEEEEEEE
Q 029565 140 ENEDLQMLVVI 150 (191)
Q Consensus 140 ~~e~~~~l~v~ 150 (191)
+ ++..|+++.
T Consensus 131 ~-~~~~F~vvd 140 (168)
T 1xsq_A 131 Q-RVTDFLTID 140 (168)
T ss_dssp S-SCEEEEEEE
T ss_pred C-CcceEEEEe
Confidence 4 367777553
No 253
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=28.02 E-value=74 Score=29.24 Aligned_cols=69 Identities=16% Similarity=0.120 Sum_probs=39.0
Q ss_pred EEECCCCcCCceecCCcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEEC---CCC--cEEEEeCCCCCcEEE
Q 029565 72 QTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIP---VND--AHQVWNTNENEDLQM 146 (191)
Q Consensus 72 ~~i~PG~~~~~H~H~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip---~g~--~H~~~N~g~~e~~~~ 146 (191)
..+++|...-..-...+.+++|++|.+.+...++. .+ ..+.+||.+=-- .+. ...+...++ ++++
T Consensus 59 ~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g~~-il-------~~l~~Gd~fGe~al~~~~~~~~tv~A~ed--d~~l 128 (694)
T 3cf6_E 59 SHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKG-VV-------CTLHEGDDFGKLALVNDAPRAASIVLRED--NCHF 128 (694)
T ss_dssp EECSTTCEEECTTSBCCEEEEEEESEEEEEETTTE-EE-------EEEETTCEECHHHHHHTCBCSSEEEECSS--SEEE
T ss_pred EEECCCCEEECCCCcCCeEEEEEEEEEEEEEeCCE-EE-------EEeCCCCEeehHHHhCCCCceEEEEEeeC--ceEE
Confidence 34666654322222356799999999999876642 22 367788864211 223 334444432 3677
Q ss_pred EEEE
Q 029565 147 LVVI 150 (191)
Q Consensus 147 l~v~ 150 (191)
+.+-
T Consensus 129 l~I~ 132 (694)
T 3cf6_E 129 LRVD 132 (694)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 254
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=24.05 E-value=2.5e+02 Score=21.77 Aligned_cols=64 Identities=13% Similarity=0.189 Sum_probs=39.8
Q ss_pred EEEEEECCCC-cCCceecCCcEEEEEEeCEEEE-EECCeeeecCCCCCceeeecC----Ce--EEEECCCCcEEEEeC
Q 029565 69 VWLQTFSPGT-RTPIHRHSCEEIFIVLKGSGTL-YLASSSHEKHPGKPQEHFFFA----NS--TFHIPVNDAHQVWNT 138 (191)
Q Consensus 69 ~~~~~i~PG~-~~~~H~H~~eE~~~Vl~G~~~v-~i~~~~~~l~~gk~~d~~l~~----GD--~v~ip~g~~H~~~N~ 138 (191)
..+.-+.+|. ....|+=..+|+++-..|.... .+... |+.+++.|++ |+ -++||+|.+..-+..
T Consensus 81 aIYfLL~~~~~~S~wHRv~sdEiW~~h~G~p~~~li~~d------g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 81 LIYYLLTPDSPIGKFHKNINRIIHILQRGKGQYVLVYPD------GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEEEBTTBCEEEEEEESSCEEEEEEEECEEEEEECTT------SCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred EEEEEEcCCCCcccceeeCCCEEEEEEcCCccEEEEcCC------CCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 3344477675 4556766699999999996544 33321 2222234433 43 378999999988765
No 255
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=20.53 E-value=1.5e+02 Score=28.05 Aligned_cols=54 Identities=15% Similarity=0.201 Sum_probs=35.7
Q ss_pred CcEEEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEE---ECCCCcEE--EEeCCCCCcEEEEEEE
Q 029565 87 CEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFH---IPVNDAHQ--VWNTNENEDLQMLVVI 150 (191)
Q Consensus 87 ~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~---ip~g~~H~--~~N~g~~e~~~~l~v~ 150 (191)
.+.+++|++|++.+..+++... ..+.+||.+= +--+.++. ++...+ ++.++++.
T Consensus 379 gds~YIIlsG~V~V~~~~~~~v--------~~L~~Gd~FGElALL~~~PR~aTV~a~~d--~c~fl~i~ 437 (999)
T 4f7z_A 379 GTSWYIILKGSVNVVIYGKGVV--------CTLHEGDDFGKLALVNDAPRAASIVLRED--NCHFLRVD 437 (999)
T ss_dssp CCEEEEEEESEEEEEETTTEEE--------EEEETTCEECGGGGTCSCBCSSEEEESSS--SEEEEEEE
T ss_pred CCeEEEEEeeEEEEEEcCCcce--------EEecCCCcccchhhccCCCeeEEEEEecC--ceEEEEee
Confidence 5678999999999988764311 3677888742 22456664 444443 58888875
No 256
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=20.28 E-value=96 Score=24.85 Aligned_cols=54 Identities=13% Similarity=0.014 Sum_probs=39.3
Q ss_pred EEEEEeCEEEEEECCeeeecCCCCCceeeecCCeEEEECCCCcEEEEeCCCCCcEEEEEEEe
Q 029565 90 IFIVLKGSGTLYLASSSHEKHPGKPQEHFFFANSTFHIPVNDAHQVWNTNENEDLQMLVVIS 151 (191)
Q Consensus 90 ~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l~~GD~v~ip~g~~H~~~N~g~~e~~~~l~v~~ 151 (191)
..-..+|+-.+.-||....+. .+..||-|.-+.|.++.+.|...+ .-.++.|..
T Consensus 9 ~~~Fa~GT~VLMADGS~K~IE-------dI~vGD~Vmg~DG~pR~V~~l~rG-~d~mY~I~~ 62 (237)
T 1gpp_A 9 SACFAKGTNVLMADGSIECIE-------NIEVGNKVMGKDGRPREVIKLPRG-SETMYSVVQ 62 (237)
T ss_dssp CEEECTTCEEEBTTSCEEEGG-------GCCTTCEEEBTTSSEEEEEECCEE-EEEEEEEEE
T ss_pred ccccCCCCEEEEeCCCcceee-------ecccCCEEecCCCCcceEEEeccc-cceeEEEee
Confidence 455668888888788764442 688999999999999999998653 344555543
No 257
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=20.23 E-value=1.6e+02 Score=21.69 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=3.8
Q ss_pred CCceehhHHHHHHHHhhhccccccCcCcccCCCeeEec
Q 029565 1 MARSWLIFLCLSFILLSANIEADASHCSIKGFPLVRNI 38 (191)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i 38 (191)
|+...|+++|+..|++.+. +++..-.....|+.-++
T Consensus 1 m~~~~~~l~~la~l~~~s~--a~p~~~~~sk~PLTtHV 36 (147)
T 4ank_A 1 MASHRLLLLCLAGLVFVSE--AGPTGTGESKCPLMVKV 36 (147)
T ss_dssp -------------------------------CCEEEEE
T ss_pred CchHHHHHHHHHHHHhhcc--cCCcCCCCCCCCeEEEE
Confidence 7888888888888776554 33333334445565554
No 258
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=20.15 E-value=23 Score=25.48 Aligned_cols=8 Identities=25% Similarity=0.385 Sum_probs=0.0
Q ss_pred CCceehhH
Q 029565 1 MARSWLIF 8 (191)
Q Consensus 1 ~~~~~~~~ 8 (191)
|.|+.++.
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 55544444
No 259
>2lok_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Halobacterium SP} PDB: 4dlh_A
Probab=20.07 E-value=2.9e+02 Score=21.33 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=26.1
Q ss_pred CCcEEEEEEeCEEEEEECCeeeecCCCCCceeee--cCCeEEEEC
Q 029565 86 SCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFF--FANSTFHIP 128 (191)
Q Consensus 86 ~~eE~~~Vl~G~~~v~i~~~~~~l~~gk~~d~~l--~~GD~v~ip 128 (191)
.+.+..|+.-|++.+.++|+.+.|. .+ ..++.+++|
T Consensus 79 ~g~~~~~~~~G~v~F~l~G~~~~L~-------~~~~~~~~~Lflp 116 (197)
T 2lok_A 79 RGPPAEYTRAAVLGFDLGDSHHTLT-------AFRVEGESSLFVP 116 (197)
T ss_dssp SSSCEEEEEEEEEEEEETTEEEEEE-------EEEETTEEEEEEE
T ss_pred CCceEEEEEeEEEEEEECCEEEEEE-------EEecCCCCeEEEE
Confidence 3556789999999999999887663 22 355666665
Done!