BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029566
MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF
AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL
LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR
IPRTLSKDKVS

High Scoring Gene Products

Symbol, full name Information P value
AT3G10915 protein from Arabidopsis thaliana 3.3e-56
BTI2
VIRB2-interacting protein 2 		protein from Arabidopsis thaliana 1.8e-25
BTI3
AT5G41600 		protein from Arabidopsis thaliana 2.0e-24
BTI1
AT4G23630 		protein from Arabidopsis thaliana 8.7e-24
AT2G46170 protein from Arabidopsis thaliana 1.0e-22
AT2G15280 protein from Arabidopsis thaliana 1.3e-22
AT3G54120 protein from Arabidopsis thaliana 5.5e-22
AT3G18260 protein from Arabidopsis thaliana 3.0e-21
RTNLB13
AT2G23640 		protein from Arabidopsis thaliana 6.4e-12
AT3G19460 protein from Arabidopsis thaliana 1.3e-11
AT3G61560 protein from Arabidopsis thaliana 9.4e-11
RTN2
Reticulon-2 		protein from Homo sapiens 6.7e-06
LOC100847649
Uncharacterized protein 		protein from Bos taurus 7.0e-06
RTN2
Reticulon-2 		protein from Homo sapiens 5.7e-05
Rtn2
reticulon 2 		gene from Rattus norvegicus 8.6e-05
RTN2
Uncharacterized protein 		protein from Bos taurus 0.00011
Rtn2
reticulon 2 (Z-band associated protein) 		protein from Mus musculus 0.00011
rtn4a
reticulon 4a 		gene_product from Danio rerio 0.00011
RTN3
Uncharacterized protein 		protein from Sus scrofa 0.00015
RTN1
Uncharacterized protein 		protein from Gallus gallus 0.00038
Gga.4205
Uncharacterized protein 		protein from Gallus gallus 0.00044
RTN3
Reticulon-3 		protein from Bos taurus 0.00047
J9P9U4
Uncharacterized protein 		protein from Canis lupus familiaris 0.00047
rtn1-a
Reticulon-1-A 		protein from Xenopus laevis 0.00051
RTN4
Reticulon-4 		protein from Homo sapiens 0.00092

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029566
        (191 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar...   579  3.3e-56   1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote...   289  1.8e-25   1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote...   279  2.0e-24   1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote...   273  8.7e-24   1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi...   263  1.0e-22   1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species...   262  1.3e-22   1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species...   256  5.5e-22   1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species...   249  3.0e-21   1
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3...   161  6.4e-12   1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species...   158  1.3e-11   1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi...   107  9.4e-11   2
UNIPROTKB|K7EMR7 - symbol:RTN2 "Reticulon-2" species:9606...   100  6.7e-06   2
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p...   104  7.0e-06   1
UNIPROTKB|O75298 - symbol:RTN2 "Reticulon-2" species:9606...   100  5.7e-05   2
RGD|1303245 - symbol:Rtn2 "reticulon 2" species:10116 "Ra...   106  8.6e-05   2
UNIPROTKB|F1LM00 - symbol:Rtn2 "Protein Rtn2" species:101...   106  8.6e-05   2
UNIPROTKB|F6S165 - symbol:RTN2 "Uncharacterized protein" ...   101  0.00011   2
MGI|MGI:107612 - symbol:Rtn2 "reticulon 2 (Z-band associa...   106  0.00011   2
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec...   111  0.00011   1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ...   108  0.00015   1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ...   104  0.00038   1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote...   100  0.00044   2
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913...   105  0.00047   1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein...   106  0.00047   1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:...   103  0.00051   1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_...   104  0.00065   1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606...    96  0.00092   2


>TAIR|locus:1005716554 [details] [associations]
            symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
            RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
            EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
            OMA:HDITLGK Uniprot:F4J500
        Length = 249

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 112/186 (60%), Positives = 143/186 (76%)

Query:     7 ADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXK 66
             AD+LLW+RR +S GVI+++TVAWLIFE SGLPFLSV SDVLL++I++            +
Sbjct:    64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123

Query:    67 QXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFF-QVVAYLWLLSAIG 125
             Q            MVN+AAASFR+K+N+LL+MAHD+TVG DFRLFF QVV  LWLLSAIG
Sbjct:   124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183

Query:   126 SYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTL 185
             SY S  TL YIGT+LS+T+PALYS+++++VD+ CG IH+ +S HYK+VDENVISR+  +L
Sbjct:   184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 243

Query:   186 SKDKVS 191
             SKDK S
Sbjct:   244 SKDKDS 249


>TAIR|locus:2128238 [details] [associations]
            symbol:BTI2 "VIRB2-interacting protein 2" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
            "endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
            "integral to cytosolic side of endoplasmic reticulum membrane"
            evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
            evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
            organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
            GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
            EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
            eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
            GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
            EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
            RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
            SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
            EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
            TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
            Genevestigator:Q9SUT9 Uniprot:Q9SUT9
        Length = 271

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 61/189 (32%), Positives = 98/189 (51%)

Query:     1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXX 60
             +GGG+ AD+ +WK +++S GV   ATVAW++FE      L++   V+++ + ++      
Sbjct:    80 LGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNA 139

Query:    61 XXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
                  K              +   A+  R++IN  +    +I  G+D + F   +A LW+
Sbjct:   140 TMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWV 199

Query:   121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
             LS +G  +SF TLAYI  +L  TVP  Y ++E +VD Y       + + Y V+D  V S+
Sbjct:   200 LSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSK 259

Query:   181 IPRTLSKDK 189
             IPR   KDK
Sbjct:   260 IPRGPLKDK 268


>TAIR|locus:2160447 [details] [associations]
            symbol:BTI3 "VIRB2-interacting protein 3" species:3702
            "Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
            [GO:0071458 "integral to cytosolic side of endoplasmic reticulum
            membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
            network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
            network organization" evidence=IMP] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
            eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
            EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
            UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
            STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
            GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
            OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
            Genevestigator:Q9FFS0 Uniprot:Q9FFS0
        Length = 257

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 63/194 (32%), Positives = 98/194 (50%)

Query:     1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXX 60
             +GGG+ AD+ LW+ ++VS GV+   T +W++FE      L+      +  +  +      
Sbjct:    63 LGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNA 122

Query:    61 XXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
                  K              +    +  R++IN  L +  +I  GKD + F  V+A LW+
Sbjct:   123 CTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWV 182

Query:   121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV--- 177
             LS IGS ++F TL Y  T+L  T+P LY ++E +VD Y     + I + Y V+DE V   
Sbjct:   183 LSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRK 242

Query:   178 -ISRIPR-TLSKDK 189
              IS+IPR  L+K K
Sbjct:   243 VISKIPRGALNKKK 256


>TAIR|locus:2128494 [details] [associations]
            symbol:BTI1 "VIRB2-interacting protein 1" species:3702
            "Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
            reticulum membrane" evidence=IDA] [GO:0071458 "integral to
            cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
            [GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
            [GO:0071786 "endoplasmic reticulum tubular network organization"
            evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
            GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
            IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
            ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
            PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
            KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
            HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
            ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
            Uniprot:Q9SUR3
        Length = 275

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 58/189 (30%), Positives = 98/189 (51%)

Query:     1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXX 60
             +GGG+ AD+ +WK +++S GV+  AT AW++FE      L++   V+++++ ++      
Sbjct:    84 LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query:    61 XXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
                  K              +   A+  R++IN       +I  G+D + F   +A LW+
Sbjct:   144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203

Query:   121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
             LS +G  F+F TLAYI  +L  TVP  Y ++E +VD         + + Y V+DE V+S+
Sbjct:   204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263

Query:   181 IPRTLSKDK 189
             IP    K+K
Sbjct:   264 IPLGPLKNK 272


>TAIR|locus:2062882 [details] [associations]
            symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
            [GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
            to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
            evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
            PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
            EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
            RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
            SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
            GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
            OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
            Genevestigator:O82352 Uniprot:O82352
        Length = 255

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 59/189 (31%), Positives = 95/189 (50%)

Query:     1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXX 60
             +GGG+ ADV LW+ +++S  V+ VAT  W++FE      LS+   + +L +  +      
Sbjct:    63 LGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNA 122

Query:    61 XXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
                  K                  A+S R ++N   ++   I +G+D + F  VV  LW+
Sbjct:   123 HTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWI 182

Query:   121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
             +S +G++F+F TL YI  ++  TVP LY + E +VD       K + + Y V DE V+S+
Sbjct:   183 ISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSK 242

Query:   181 IPRTLSKDK 189
             IP    K K
Sbjct:   243 IPIASLKAK 251


>TAIR|locus:2049077 [details] [associations]
            symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
            PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
            EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
            RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
            UniGene:At.40435 ProteinModelPortal:Q6NPD8
            EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
            TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
            PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
            Uniprot:Q6NPD8
        Length = 201

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 51/178 (28%), Positives = 92/178 (51%)

Query:     4 GRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXX 63
             G  AD+++WK RR  F ++   T+ W +FE+ G  F     +  LL +V++         
Sbjct:    12 GSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAIL 71

Query:    64 XXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSA 123
               +              V   A + RV IN +L +A +I VG++ +  F+V   LW +S 
Sbjct:    72 FNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSF 131

Query:   124 IGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRI 181
             +G++ +F T+ Y+G +LS+ +P LY R++  +D    + H+ I   Y+ +DE ++ +I
Sbjct:   132 VGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189


>TAIR|locus:2080315 [details] [associations]
            symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
            PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
            PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
            HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
            IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
            ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
            GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
            InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
            ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
        Length = 203

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 51/152 (33%), Positives = 81/152 (53%)

Query:     1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXX 60
             +GGG  ADV+LW+++ VS G++ V   +W++FE       ++ S VLLLL+ ++      
Sbjct:    19 LGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKS 78

Query:    61 XXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
                  +             M   A+   R+ +N LL ++HDI + +D  L+ +V   L+L
Sbjct:    79 ASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFL 138

Query:   121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 152
             LS IGS   F TL +   L+ +TVPA Y R+E
Sbjct:   139 LSLIGSLMDFQTLCHTSVLVVMTVPAFYERYE 170


>TAIR|locus:2089663 [details] [associations]
            symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
            PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
            EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
            ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
            GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
            InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
            ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
        Length = 225

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 52/188 (27%), Positives = 92/188 (48%)

Query:     2 GGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXX 61
             GGG+ AD+LLW+  +++  +++  ++ W + E     F+++     +  ++         
Sbjct:    35 GGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTAS 94

Query:    62 XXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLL 121
                  +                 A SF V+ N +L    D+  G+D  LFF     L+++
Sbjct:    95 DFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIV 154

Query:   122 SAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRI 181
             S IG+YF+F  L +IG +   T+P +Y  +E  VD   G + + + + YK VD NV+S+I
Sbjct:   155 SIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKI 214

Query:   182 PRTLSKDK 189
             PR   K+K
Sbjct:   215 PRGTVKNK 222


>TAIR|locus:2046783 [details] [associations]
            symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=IDA] [GO:0071458 "integral to cytosolic side of
            endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
            "endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
            "endoplasmic reticulum tubular network organization" evidence=IMP]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
            PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
            IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
            ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
            EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
            TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
            InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
            ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
        Length = 206

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 32/171 (18%), Positives = 76/171 (44%)

Query:     8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQ 67
             D+ LW+R++++F  ++V+T  W++    G   +++ S + + ++ ++           K 
Sbjct:    18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77

Query:    68 XXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSY 127
                          V     S R+ +  ++     +    ++ +F + V   W+LS IG+ 
Sbjct:    78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137

Query:   128 FSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 178
               F T  +IG ++ +TVP L+  +  ++ ++ G +       Y    E ++
Sbjct:   138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKIL 188


>TAIR|locus:2090609 [details] [associations]
            symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
            PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
            PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
            RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
            PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
            KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
            Genevestigator:A8MR23 Uniprot:A8MR23
        Length = 218

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 46/165 (27%), Positives = 71/165 (43%)

Query:     7 ADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXK 66
             AD+LLW+ R  +  +++ +T  W +FER+G   LS  S+VLLLL+ +            +
Sbjct:     7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66

Query:    67 QXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKD-FRLFFQVVAYLWLLSAIG 125
                            N AA   RV INY+L +A DIT+ ++  RL      +LW    I 
Sbjct:    67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLW--QTIC 124

Query:   126 SYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHY 170
               F F  + Y+   +S                Y G +  S++  Y
Sbjct:   125 CIFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVY 169

 Score = 106 (42.4 bits), Expect = 0.00023, P = 0.00023
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query:    94 YLLLMAHDITVGKDFRLFF-QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 152
             +L L    +TV   F     QV   LW +S +G+  +  TL YIG LLS++ P +Y +++
Sbjct:   127 FLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQ 186

Query:   153 ARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 189
               +D       + ++   K V  N+  + P  ++K+K
Sbjct:   187 DHID-------EKVNSTSKFV-RNISRKFPLPINKEK 215


>TAIR|locus:2082772 [details] [associations]
            symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
            [GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
            IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
            EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
            Uniprot:F4JFD4
        Length = 264

 Score = 107 (42.7 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query:     1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLS-VCSDVLLLLIVL 53
             +GGG  ADV LW+ +++S  V+ VAT  W++FE     FLS VC  ++  L  L
Sbjct:    63 LGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAAL 116

 Score = 91 (37.1 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
 Identities = 19/48 (39%), Positives = 27/48 (56%)

Query:   143 TVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDKV 190
             TVP LY + E +VD       K + +HY V DE V+S++P    K K+
Sbjct:   216 TVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAKL 263


>UNIPROTKB|K7EMR7 [details] [associations]
            symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
            [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:CH471126
            EMBL:AC138534 PANTHER:PTHR10994 HGNC:HGNC:10468
            Ensembl:ENST00000590526 Uniprot:K7EMR7
        Length = 271

 Score = 100 (40.3 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
 Identities = 20/66 (30%), Positives = 40/66 (60%)

Query:   119 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 178
             ++L+ +G+ F+  TL  +G +   T+P LY + +A++D+Y G++   +S H K     + 
Sbjct:   192 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 247

Query:   179 SRIPRT 184
             ++IP T
Sbjct:   248 AKIPGT 253

 Score = 55 (24.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query:     3 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLI 51
             G + AD+L WK  R S GV+    +  L+        +SV + + LLL+
Sbjct:    68 GSKVADLLYWKDTRTS-GVVFTGLMVSLLCLLH-FSIVSVAAHLALLLL 114


>UNIPROTKB|G3X7U3 [details] [associations]
            symbol:LOC100847649 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
            Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
        Length = 74

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 18/75 (24%), Positives = 41/75 (54%)

Query:   113 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 172
             Q+  ++WL++ +G+ F+  TL  +  LL  ++P +Y +++ ++D Y G+         K 
Sbjct:     1 QLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQT----KS 56

Query:   173 VDENVISRIPRTLSK 187
             + E + +++P    K
Sbjct:    57 IVEKIQAKLPGIAKK 71


>UNIPROTKB|O75298 [details] [associations]
            symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
            [GO:0008219 "cell death" evidence=IEA] [GO:0030176 "integral to
            endoplasmic reticulum membrane" evidence=NAS] [GO:0004871 "signal
            transducer activity" evidence=NAS] [GO:0007165 "signal
            transduction" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0008219
            GO:GO:0004871 GO:GO:0030176 PANTHER:PTHR10994 EMBL:AF004222
            EMBL:AF004223 EMBL:AF004224 EMBL:AF038540 EMBL:BK001686
            EMBL:BK001687 EMBL:BK001688 IPI:IPI00024983 IPI:IPI00216112
            IPI:IPI00410134 RefSeq:NP_005610.1 RefSeq:NP_996783.1
            RefSeq:NP_996784.1 UniGene:Hs.47517 ProteinModelPortal:O75298
            SMR:O75298 IntAct:O75298 STRING:O75298 PhosphoSite:O75298
            PaxDb:O75298 PRIDE:O75298 Ensembl:ENST00000245923
            Ensembl:ENST00000344680 Ensembl:ENST00000430715 GeneID:6253
            KEGG:hsa:6253 UCSC:uc002pcb.3 UCSC:uc002pcc.3 CTD:6253
            GeneCards:GC19M045988 HGNC:HGNC:10468 HPA:HPA034941 MIM:603183
            MIM:604805 neXtProt:NX_O75298 Orphanet:100993 PharmGKB:PA34881
            eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
            InParanoid:O75298 OMA:REPITGQ OrthoDB:EOG4FJ88W PhylomeDB:O75298
            ChiTaRS:RTN2 GenomeRNAi:6253 NextBio:24285 Bgee:O75298
            CleanEx:HS_RTN2 Genevestigator:O75298 GermOnline:ENSG00000125744
            Uniprot:O75298
        Length = 545

 Score = 100 (40.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
 Identities = 20/66 (30%), Positives = 40/66 (60%)

Query:   119 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 178
             ++L+ +G+ F+  TL  +G +   T+P LY + +A++D+Y G++   +S H K     + 
Sbjct:   466 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 521

Query:   179 SRIPRT 184
             ++IP T
Sbjct:   522 AKIPGT 527

 Score = 55 (24.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query:     3 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLI 51
             G + AD+L WK  R S GV+    +  L+        +SV + + LLL+
Sbjct:   342 GSKVADLLYWKDTRTS-GVVFTGLMVSLLCLLH-FSIVSVAAHLALLLL 388


>RGD|1303245 [details] [associations]
            symbol:Rtn2 "reticulon 2" species:10116 "Rattus norvegicus"
            [GO:0005783 "endoplasmic reticulum" evidence=ISO]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
            GO:GO:0005783 PANTHER:PTHR10994 CTD:6253 eggNOG:NOG250449
            HOGENOM:HOG000119393 HOVERGEN:HBG099866 OMA:REPITGQ
            OrthoDB:EOG4FJ88W IPI:IPI00409538 EMBL:BC129079 EMBL:AY279211
            EMBL:BK001788 RefSeq:NP_963856.1 UniGene:Rn.3210 STRING:Q6WN19
            GeneID:308410 KEGG:rno:308410 UCSC:RGD:1303245 InParanoid:Q6WN19
            NextBio:658806 Genevestigator:Q6WN19 Uniprot:Q6WN19
        Length = 469

 Score = 106 (42.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
 Identities = 28/97 (28%), Positives = 52/97 (53%)

Query:    97 LMAHDITVGKDFRLFFQV--------VAYL-WLLSAIGSYFSFFTLAYIGTLLSITVPAL 147
             + +H ++     R FF V        +A L ++L+ +G+ F+  TL  +G +   TVP L
Sbjct:   360 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 419

Query:   148 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 184
             Y + +A++D+Y G++   +S H K     + ++IP T
Sbjct:   420 YRQHQAQIDQYVGLVTSQLS-HIKA---KIRAKIPGT 452

 Score = 43 (20.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query:     7 ADVLLWKRRRVSFGVIVVATVAWLI 31
             AD+L WK  R S G I    +A L+
Sbjct:   271 ADLLYWKDTRTS-GAIFTGLMASLL 294


>UNIPROTKB|F1LM00 [details] [associations]
            symbol:Rtn2 "Protein Rtn2" species:10116 "Rattus
            norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
            GO:GO:0005783 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
            IPI:IPI00409538 Ensembl:ENSRNOT00000022528 ArrayExpress:F1LM00
            Uniprot:F1LM00
        Length = 470

 Score = 106 (42.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
 Identities = 28/97 (28%), Positives = 52/97 (53%)

Query:    97 LMAHDITVGKDFRLFFQV--------VAYL-WLLSAIGSYFSFFTLAYIGTLLSITVPAL 147
             + +H ++     R FF V        +A L ++L+ +G+ F+  TL  +G +   TVP L
Sbjct:   361 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 420

Query:   148 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 184
             Y + +A++D+Y G++   +S H K     + ++IP T
Sbjct:   421 YRQHQAQIDQYVGLVTSQLS-HIKA---KIRAKIPGT 453

 Score = 43 (20.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query:     7 ADVLLWKRRRVSFGVIVVATVAWLI 31
             AD+L WK  R S G I    +A L+
Sbjct:   272 ADLLYWKDTRTS-GAIFTGLMASLL 295


>UNIPROTKB|F6S165 [details] [associations]
            symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
            EMBL:DAAA02047375 IPI:IPI00842729 Ensembl:ENSBTAT00000043635
            Uniprot:F6S165
        Length = 541

 Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 21/66 (31%), Positives = 40/66 (60%)

Query:   119 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 178
             ++L+ +G+ F+  TL  +G +   TVP LY + +A++D+Y G++   +S H K     + 
Sbjct:   462 YILTFVGAVFNGLTLLILGVIGVFTVPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 517

Query:   179 SRIPRT 184
             ++IP T
Sbjct:   518 AKIPGT 523

 Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:     3 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLI 51
             G +  D+L WK  + S GV+    +  L+        +SV + V LLL+
Sbjct:   338 GSKVVDLLHWKDAKTS-GVVFTCLMVSLL-SLLHFSIVSVAAHVALLLL 384


>MGI|MGI:107612 [details] [associations]
            symbol:Rtn2 "reticulon 2 (Z-band associated protein)"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
            [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR003388 Pfam:PF02453
            PROSITE:PS50845 MGI:MGI:107612 GO:GO:0016021 GO:GO:0005789
            EMBL:AF093624 PANTHER:PTHR10994 HOGENOM:HOG000015254 CTD:6253
            eggNOG:NOG250449 HOVERGEN:HBG099866 OMA:REPITGQ OrthoDB:EOG4FJ88W
            EMBL:AF038537 EMBL:AF038538 EMBL:AF038539 EMBL:BC031370
            IPI:IPI00120427 IPI:IPI00229453 RefSeq:NP_001020535.1
            RefSeq:NP_038676.1 UniGene:Mm.24142 ProteinModelPortal:O70622
            SMR:O70622 STRING:O70622 PhosphoSite:O70622 PaxDb:O70622
            PRIDE:O70622 Ensembl:ENSMUST00000032559 Ensembl:ENSMUST00000108468
            GeneID:20167 KEGG:mmu:20167 InParanoid:O70622 NextBio:297679
            Bgee:O70622 CleanEx:MM_RTN2 Genevestigator:O70622
            GermOnline:ENSMUSG00000030401 Uniprot:O70622
        Length = 471

 Score = 106 (42.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 28/97 (28%), Positives = 52/97 (53%)

Query:    97 LMAHDITVGKDFRLFFQV--------VAYL-WLLSAIGSYFSFFTLAYIGTLLSITVPAL 147
             + +H ++     R FF V        +A L ++L+ +G+ F+  TL  +G +   TVP L
Sbjct:   362 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 421

Query:   148 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 184
             Y + +A++D+Y G++   +S H K     + ++IP T
Sbjct:   422 YRQHQAQIDQYVGLVTNQLS-HIKA---KIRAKIPGT 454

 Score = 42 (19.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query:     7 ADVLLWKRRRVSFGVIVVATVAWLI 31
             AD+L WK  R S G +    +A L+
Sbjct:   273 ADLLYWKDTRTS-GAVFTGLMASLL 296


>ZFIN|ZDB-GENE-030710-1 [details] [associations]
            symbol:rtn4a "reticulon 4a" species:7955 "Danio
            rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0007409
            "axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
            evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
            [GO:0048936 "peripheral nervous system neuron axonogenesis"
            evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
            GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
            GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
            EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
            UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
            Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
            InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
        Length = 322

 Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
 Identities = 23/105 (21%), Positives = 52/105 (49%)

Query:    80 MVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTL 139
             MV+  + S  V IN ++     + + +D     +    +W+L+ +G+ F+  TL  +G +
Sbjct:   217 MVHKYSDSTLVHINTVIKELRRLFLVEDLVDSLKFAVLMWILTYVGALFNGLTLIILGFI 276

Query:   140 LSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 184
              + + P +Y + +A++D Y G+++K        +   +    P+T
Sbjct:   277 GAFSCPVIYEKHQAQIDHYYGLVNKQFKDVVGKIQAKIPGAKPKT 321


>UNIPROTKB|F1RPY3 [details] [associations]
            symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071786 "endoplasmic reticulum tubular network
            organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
            GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
            EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
        Length = 236

 Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
 Identities = 24/106 (22%), Positives = 53/106 (50%)

Query:    82 NNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLS 141
             +N   +  V IN  L +   + + +D     ++  ++WL++ +G+ F+  TL  +  LL 
Sbjct:   132 HNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLI 191

Query:   142 ITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSK 187
              +VP +Y +++ ++D Y G+         K + E + +++P    K
Sbjct:   192 FSVPVVYEKYKTQIDHYVGIARDQT----KSIVEKIQAKVPGIAKK 233


>UNIPROTKB|F1NH22 [details] [associations]
            symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
            EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
            ArrayExpress:F1NH22 Uniprot:F1NH22
        Length = 208

 Score = 104 (41.7 bits), Expect = 0.00038, P = 0.00038
 Identities = 18/65 (27%), Positives = 38/65 (58%)

Query:   118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 177
             +WLL+ +G+ F+  TL  +  +   T+P +Y +++A++D+Y G++      H   V   +
Sbjct:   141 MWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYLGLVRT----HINTVVAKI 196

Query:   178 ISRIP 182
              ++IP
Sbjct:   197 QAKIP 201


>UNIPROTKB|F1P5B1 [details] [associations]
            symbol:Gga.4205 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
            IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
            Uniprot:F1P5B1
        Length = 326

 Score = 100 (40.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
 Identities = 14/49 (28%), Positives = 32/49 (65%)

Query:   118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 166
             +W+ + +G+ F+  TL  +  +   +VP +Y R +A++D Y G+++K++
Sbjct:   259 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNV 307

 Score = 40 (19.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query:    14 RRRVSF-GVIVVATVAWLIFERSGLPF 39
             RRRVS  G  VV  + W   +++G+ F
Sbjct:   129 RRRVSSSGSAVVDLLYWRDIKKTGVVF 155


>UNIPROTKB|Q08D83 [details] [associations]
            symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
            [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
            [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
            "vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
            GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
            HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
            EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
            UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
            GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
            InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
        Length = 256

 Score = 105 (42.0 bits), Expect = 0.00047, P = 0.00047
 Identities = 23/106 (21%), Positives = 53/106 (50%)

Query:    82 NNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLS 141
             +N   +  V IN  L +   + + +D     ++  ++WL++ +G+ F+  TL  +  LL 
Sbjct:   152 HNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLV 211

Query:   142 ITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSK 187
              ++P +Y +++ ++D Y G+         K + E + +++P    K
Sbjct:   212 FSIPIVYEKYKTQIDHYVGIARDQT----KSIVEKIQAKLPGIAKK 253


>UNIPROTKB|J9P9U4 [details] [associations]
            symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
            EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
            Uniprot:J9P9U4
        Length = 296

 Score = 106 (42.4 bits), Expect = 0.00047, P = 0.00047
 Identities = 24/106 (22%), Positives = 53/106 (50%)

Query:    82 NNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLS 141
             +N   +  V IN  L +   + + +D     ++  ++WL++ +G+ F+  TL  +  LL 
Sbjct:   192 HNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLI 251

Query:   142 ITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSK 187
              +VP +Y +++ ++D Y G+         K + E + +++P    K
Sbjct:   252 FSVPIVYEKYKTQIDHYVGIARDQT----KSIVEKIQAKLPGIAKK 293


>UNIPROTKB|Q6IFY7 [details] [associations]
            symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
            GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
            EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
            ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
            CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
            Uniprot:Q6IFY7
        Length = 207

 Score = 103 (41.3 bits), Expect = 0.00051, P = 0.00051
 Identities = 17/71 (23%), Positives = 43/71 (60%)

Query:   118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 177
             +WLL+ +G+ F+  TL  +  +   ++P +Y +++A++D+Y G++  +++     +   +
Sbjct:   141 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----TIMTKI 196

Query:   178 ISRIPRTLSKD 188
              ++IP T  K+
Sbjct:   197 QAKIPGTKQKE 207


>UNIPROTKB|D4A1U2 [details] [associations]
            symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
            "Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
            RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
            UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
            Uniprot:D4A1U2
        Length = 256

 Score = 104 (41.7 bits), Expect = 0.00066, P = 0.00065
 Identities = 22/98 (22%), Positives = 50/98 (51%)

Query:    90 VKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYS 149
             V +N  L +   + + +D     ++  ++WL++ +G+ F+  TL  +  LL  +VP +Y 
Sbjct:   160 VHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYE 219

Query:   150 RFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSK 187
             +++ ++D Y G+         K + E + +++P    K
Sbjct:   220 KYKTQIDHYVGIARDQT----KSIVEKIQAKLPGIAKK 253


>UNIPROTKB|F8W914 [details] [associations]
            symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
            [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
            EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
            HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
            ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
            ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
        Length = 345

 Score = 96 (38.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
 Identities = 14/49 (28%), Positives = 31/49 (63%)

Query:   118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 166
             +W+ + +G+ F+  TL  +  +   +VP +Y R +A++D Y G+ +K++
Sbjct:   278 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNV 326

 Score = 43 (20.2 bits), Expect = 0.00092, Sum P(2) = 0.00092
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:    14 RRRVSFGVIVVATVAWLIFERSGLPF 39
             +RR S G +VV  + W   +++G+ F
Sbjct:   149 KRRGSSGSVVVDLLYWRDIKKTGVVF 174


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.142   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       168   0.00079  108 3  11 21  0.40    31
                                                     31  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  27
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  141 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.04u 0.07s 13.11t   Elapsed:  00:00:01
  Total cpu time:  13.04u 0.07s 13.11t   Elapsed:  00:00:01
  Start:  Sat May 11 02:44:07 2013   End:  Sat May 11 02:44:08 2013

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