BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029566
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 130/191 (68%), Positives = 165/191 (86%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
MGGG+ AD+LLW+RR +S GVI+++TVAWLIFE SGLPFLSV SDVLL++I++ F A
Sbjct: 36 MGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARV 95
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
+AFRN+QL SLPEL +SEEMVN+AAASFR+K+N+LL+MAHD+TVG DFRLFF+VV LWL
Sbjct: 96 SAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWL 155
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
LSAIGSY S TL YIGT+LS+T+PALYS+++++VD+ CG IH+ +S HYK+VDENVISR
Sbjct: 156 LSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISR 215
Query: 181 IPRTLSKDKVS 191
+ +LSKDK S
Sbjct: 216 LSWSLSKDKDS 226
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 139 bits (351), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 110/189 (58%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG+ AD+ +WK +++S GV ATVAW++FE L++ V+++ + ++F +N
Sbjct: 80 LGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNA 139
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
F +K +PE+ + EE + A+ R++IN + +I G+D + F +A LW+
Sbjct: 140 TMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWV 199
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
LS +G +SF TLAYI +L TVP Y ++E +VD Y + + Y V+D V S+
Sbjct: 200 LSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSK 259
Query: 181 IPRTLSKDK 189
IPR KDK
Sbjct: 260 IPRGPLKDK 268
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 110/189 (58%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG+ AD+ +WK +++S GV+ AT AW++FE L++ V+++++ ++F +N
Sbjct: 84 LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
F NK +PE+ + EE + A+ R++IN +I G+D + F +A LW+
Sbjct: 144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
LS +G F+F TLAYI +L TVP Y ++E +VD + + Y V+DE V+S+
Sbjct: 204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263
Query: 181 IPRTLSKDK 189
IP K+K
Sbjct: 264 IPLGPLKNK 272
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 106/182 (58%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG ADV LW+ +++S V+ VAT W++FE FLS+ +L+ + +F +N
Sbjct: 63 LGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNA 122
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
AF NK +PE+ + EE ++ R ++N ++ I +G+D + F VV LW+
Sbjct: 123 HAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWI 182
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
+S +G++F+F TL YI ++ TVP LY + E +VD K + +HY V DE V+S+
Sbjct: 183 ISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSK 242
Query: 181 IP 182
+P
Sbjct: 243 LP 244
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG+ AD+ LW+ ++VS GV+ T +W++FE L+ + + +F +N
Sbjct: 63 LGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNA 122
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
F +K +PE+ + E+ + + R++IN L + +I GKD + F V+A LW+
Sbjct: 123 CTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWV 182
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDE----N 176
LS IGS ++F TL Y T+L T+P LY ++E +VD Y + I + Y V+DE
Sbjct: 183 LSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRK 242
Query: 177 VISRIPR-TLSKDK 189
VIS+IPR L+K K
Sbjct: 243 VISKIPRGALNKKK 256
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 105/178 (58%)
Query: 4 GRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAF 63
G AD+++WK RR F ++ T+ W +FE+ G F + LL +V++F A A
Sbjct: 12 GSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAIL 71
Query: 64 RNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSA 123
N+ + LP LE++EE V A + RV IN +L +A +I VG++ + F+V LW +S
Sbjct: 72 FNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSF 131
Query: 124 IGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRI 181
+G++ +F T+ Y+G +LS+ +P LY R++ +D + H+ I Y+ +DE ++ +I
Sbjct: 132 VGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 110/186 (59%)
Query: 2 GGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFA 61
GGG+ AD+ LW+ ++VS GV+ ATV+W++FE L++ + +L + ++F ++ +
Sbjct: 60 GGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAS 119
Query: 62 AFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLL 121
F +K +PE+ + E++V A+ R++IN + DI G+D + F V+A LW+L
Sbjct: 120 TFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVL 179
Query: 122 SAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRI 181
S +GS +F TL YI T+L T+P LY ++E +VD + + I + Y D V+S++
Sbjct: 180 SKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
Query: 182 PRTLSK 187
+ K
Sbjct: 240 MSKIPK 245
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 104/182 (57%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG+ ADV LW+ +++S V+ VAT W++FE LS+ + +L + +F +N
Sbjct: 63 LGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNA 122
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
NK +PE+ V EE A+S R ++N ++ I +G+D + F VV LW+
Sbjct: 123 HTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWI 182
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
+S +G++F+F TL YI ++ TVP LY + E +VD K + + Y V DE V+S+
Sbjct: 183 ISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSK 242
Query: 181 IP 182
IP
Sbjct: 243 IP 244
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 8/189 (4%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+G G AD+LLW+ R + +++ +T W +FER+G LS S+VLLLL+ + F A
Sbjct: 17 LGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKS 76
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
A N+ L +P +E+ EE N AA RV INY+L +A DIT+ ++ QV LW
Sbjct: 77 ATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWA 136
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
+S +G+ + TL YIG LLS++ P +Y +++ +D K + N+ +
Sbjct: 137 ISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFV--------RNISRK 188
Query: 181 IPRTLSKDK 189
P ++K+K
Sbjct: 189 FPLPINKEK 197
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 103/188 (54%)
Query: 2 GGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFA 61
GGG+ AD+LLW+ +++ +++ ++ W + E F+++ + ++ F + +
Sbjct: 35 GGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTAS 94
Query: 62 AFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLL 121
F N + +PE+ + E A SF V+ N +L D+ G+D LFF L+++
Sbjct: 95 DFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIV 154
Query: 122 SAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRI 181
S IG+YF+F L +IG + T+P +Y +E VD G + + + + YK VD NV+S+I
Sbjct: 155 SIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKI 214
Query: 182 PRTLSKDK 189
PR K+K
Sbjct: 215 PRGTVKNK 222
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG++ADVLLW+ +++S V++ AT W++FE FLS+ LLL ++ F +N
Sbjct: 56 LGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNA 115
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
+ F N+ +P L + ++ + ++N LL D+ + + F V LW+
Sbjct: 116 SGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWV 175
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISR 180
+ +GS +F T+ YIG + + T+P LY R+E VD + + HYK +D +SR
Sbjct: 176 AAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSR 235
Query: 181 IP 182
IP
Sbjct: 236 IP 237
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 93/152 (61%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG ADV+LW+++ VS G++ V +W++FE ++ S VLLLL+ ++F +
Sbjct: 19 LGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKS 78
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWL 120
A+ N+ LPE ++SE M A+ R+ +N LL ++HDI + +D L+ +V L+L
Sbjct: 79 ASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFL 138
Query: 121 LSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 152
LS IGS F TL + L+ +TVPA Y R+E
Sbjct: 139 LSLIGSLMDFQTLCHTSVLVVMTVPAFYERYE 170
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 5/184 (2%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFL-SVCSDVLLLLIVLMFFRAN 59
+GGG+ ADVLLW+ ++V+ G++ TV WL+F G L S+C +L L++ +
Sbjct: 65 LGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA 124
Query: 60 FAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLW 119
NK E++ ++ + E+ + AA++ ++N I + +D + F V LW
Sbjct: 125 L----NKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLW 180
Query: 120 LLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVIS 179
L+S IG++FSF +L YI +L TVP LY ++E +D + +HY+V + +S
Sbjct: 181 LVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLS 240
Query: 180 RIPR 183
+IP
Sbjct: 241 KIPH 244
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 6/191 (3%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGGR AD++ WK ++ S ++ V T+ W +FE PF++ +LLL I + +
Sbjct: 26 LGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYI 85
Query: 61 AAFR--NKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYL 118
+ + + S+ +L +SE +N F KIN+ ++ +DI+ GKDFRL F V L
Sbjct: 86 GSSQLIQSKPPSINDLRISE---SNWRFLFN-KINWFIIKLYDISSGKDFRLLFLAVVSL 141
Query: 119 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 178
W+LS +G+YFS TL YI + T+P LY ++E + + + + + VI
Sbjct: 142 WILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVI 201
Query: 179 SRIPRTLSKDK 189
++IP+ +K +
Sbjct: 202 NKIPKAQAKTR 212
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 86/172 (50%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQ 67
D+ LW+R++++F ++V+T W++ G +++ S + + ++ ++F + +K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 68 LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSY 127
L LEVSEE V S R+ + ++ + ++ +F + V W+LS IG+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 128 FSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVIS 179
F T +IG ++ +TVP L+ + ++ ++ G + Y E ++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE 189
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 10/186 (5%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+G G AD+ LWK + S +V+AT+ W + E + + +LLLL++++F A F
Sbjct: 8 LGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKF 67
Query: 61 AAFRNKQLESLPELEVSEEMVNNAAASFRVKINYL---LLMAHDITVGKDFRLFFQVVAY 117
+ PE +N + + + + LLM ++I GKD + F + + Y
Sbjct: 68 GEVFFTRRPPTPE------ELNQPDSPLKALFSMMEGHLLMLYEIAYGKDNKTFLKTILY 121
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 177
+ ++ IGSY S T+ YI + S+T+P +Y +F+ +D + G + + + +V + V
Sbjct: 122 VAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVFKQ-V 180
Query: 178 ISRIPR 183
+S+IPR
Sbjct: 181 VSKIPR 186
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 3 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSD-VLLLLIVLMFFRANFA 61
G D+L W+ + S G++ T+ L+ + +SV S VL LL V + +R +
Sbjct: 22 GCAVQDLLYWRDVKQS-GMVFGGTMV-LLLSLAAFSIISVISYLVLSLLAVTISYRVYKS 79
Query: 62 AFR--NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFF 112
+ K E P ++ +S + A ++ +N+ L + + +D
Sbjct: 80 VLQAVQKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDSL 139
Query: 113 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 172
++ +WL++ +G+ F+ TL +G LL+ T P +Y +++ ++D Y ++H H K
Sbjct: 140 KLALLMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVH----SHVKS 195
Query: 173 VDENVISRIPRTLSK 187
+ E + +++P L K
Sbjct: 196 ITEKIQAKLPGALKK 210
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 3 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFA 61
G D+L W+ + S G++ T+ L+ + +SV S ++L LL V + FR +
Sbjct: 23 GCAVRDLLYWRDVKQS-GMVFGGTMV-LLLSLAAFSIISVISYLVLSLLSVTISFRVYKS 80
Query: 62 AFR--NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFF 112
+ K E P ++ +S + +S +N+ L + + +D
Sbjct: 81 VLQAVQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAHVNHALKSIVRLFLVEDLVDSL 140
Query: 113 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 172
++ +WL++ IG+ F+ TL +G LL+ T P +Y +++ ++D Y ++H + K
Sbjct: 141 KLALLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQV----KS 196
Query: 173 VDENVISRIPRTLSK 187
+ E + +++P L K
Sbjct: 197 ITEKIQAKLPGALKK 211
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 3 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFA 61
G D+L W+ + S G++ T+ L+ + +SV S ++L LL V + +R +
Sbjct: 23 GCAVRDLLYWRDVKQS-GMVFGGTMV-LLLSLAAFSIISVISYLVLSLLTVTISYRVYKS 80
Query: 62 AFR--NKQLESLPELEVSEEMVNNAAASFR-------VKINYLLLMAHDITVGKDFRLFF 112
+ K E P + E+ + ++ SF+ +N+ L + + D
Sbjct: 81 VLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSL 140
Query: 113 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 172
++ +WL++ +G+ F+ TL +G LL+ T P +Y +++ ++D Y ++H + K
Sbjct: 141 KLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQV----KS 196
Query: 173 VDENVISRIPRTLSK 187
+ E + +++P L K
Sbjct: 197 ITEKIQAKLPGALKK 211
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 64
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 778 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 65 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 117
K E P ++ +S E +N + V +N L + + + +D ++ +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 177
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 951
Query: 178 ISRIP 182
+++P
Sbjct: 952 QAKLP 956
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 64
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 846 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 65 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 117
K E P ++ +S E +N + V IN L + + + +D ++ +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 177
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 1019
Query: 178 ISRIP 182
+++P
Sbjct: 1020 QAKLP 1024
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 64
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 754 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 65 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 117
K E P ++ +S E ++ + V +N L + + + +D ++ +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 177
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 927
Query: 178 ISRIP 182
+++P
Sbjct: 928 QAKLP 932
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + F++ N + + + +D + +WLL+ +G+ F+ T
Sbjct: 641 EISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 700
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKD 188
L + + ++P +Y +++A++D+Y G++ +++ ++ + ++IP T K+
Sbjct: 701 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----IIVTKIQAKIPGTKQKE 752
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFRNK 66
D+L W+ + + GV+ A++ +L+ + +SV + + L LL V + FR +
Sbjct: 977 DLLYWRDIKKT-GVVFGASL-FLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 67 Q-----------LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 115
Q LES E+ +SEE+V + S +N + + + D +
Sbjct: 1035 QKSDEGHPFRAYLES--EVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFA 1092
Query: 116 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 166
+W+ + +G+ F+ TL + + ++P +Y R +A++D Y G+ +KS+
Sbjct: 1093 VLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSV 1143
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFRNK 66
D+L W+ + + GV+ A++ +L+ + +SV + + L LL V + FR +
Sbjct: 1007 DLLYWRDIKKT-GVVFGASL-FLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 67 Q-----------LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 115
Q LES E+ +SEE+V + S +N + + + D +
Sbjct: 1065 QKSDEGHPFRAYLES--EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 1122
Query: 116 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 166
+W+ + +G+ F+ TL + + +VP +Y R +A++D Y G+ +K++
Sbjct: 1123 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNV 1173
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + ++ +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 665 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 724
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 182
L + + T+P +Y + +A+VD+Y G++ H V + ++IP
Sbjct: 725 LLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRT----HINTVVAKIQAKIP 770
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + ++ +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 668 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 727
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 182
L + + T+P +Y + +A+VD+Y G++ H V + ++IP
Sbjct: 728 LLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRT----HINTVVAKIQAKIP 773
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 8 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFRNK 66
D+L W+ + + GV+ A++ +L+ + +SV + + L LL V + FR +
Sbjct: 978 DLLYWRDIKKT-GVVFGASL-FLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 67 Q-----------LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 115
Q LES E+ +SEE+V + S +N + + + D +
Sbjct: 1036 QKSDEGHPFRAYLES--EVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFA 1093
Query: 116 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 166
+W+ + +G+ F+ TL + + ++P +Y R + ++D Y G+ +KS+
Sbjct: 1094 VLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSV 1144
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 8 DVLLWKR-RRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR- 64
D++ W+ ++ F V T ++ + +SV S ++L LL V + FR + +
Sbjct: 70 DLIFWRDVKKTGF---VFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 126
Query: 65 -NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVA 116
K E P ++ +S E +N + V IN L + + + +D ++
Sbjct: 127 VQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 186
Query: 117 YLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDEN 176
++WL++ +G+ F+ TL + LL ++P +Y +++ ++D Y G+ K + E
Sbjct: 187 FMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIAR----DQTKSIVEK 242
Query: 177 VISRIPRTLSK 187
+ +++P K
Sbjct: 243 IQAKLPGIAKK 253
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 8 DVLLWKR-RRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR- 64
D++ W+ ++ F V T ++ + +SV S ++L LL V + FR + +
Sbjct: 50 DLIFWRDVKKTGF---VFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQA 106
Query: 65 -NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVA 116
K E P ++ +S E +N + V IN L + + + +D ++
Sbjct: 107 VQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 166
Query: 117 YLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDEN 176
++WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E
Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEK 222
Query: 177 VISRIPRTLSK 187
+ +++P K
Sbjct: 223 IQAKLPGIAKK 233
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + + N ++ + + +D + +WLL+ +G+ F+ T
Sbjct: 653 EISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 712
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKD 188
L + + ++P +Y +++A++D+Y G++ +++ + + ++IP T K+
Sbjct: 713 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----TIVTKIQAKIPGTKQKE 764
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + + +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 182
L + + T+P +Y + +A++D+Y G++ H V + ++IP
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRT----HINAVVAKIQAKIP 769
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + + +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 182
L + + T+P +Y + +A++D+Y G++ H V + ++IP
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRT----HINAVVAKIQAKIP 769
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 73 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 132
E+ +S+E + +V N + + + +D + +WLL+ +G+ F+ T
Sbjct: 96 EISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 155
Query: 133 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKD 188
L + + ++P +Y +++A++D+Y G++ +++ + + ++IP T K+
Sbjct: 156 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----TIMTKIQAKIPGTKQKE 207
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLM----FF 56
+G G+ AD+LLW+ + +F +V + + F SG F S + +L + V + F
Sbjct: 374 LGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFSGNTFTSSAAQLLFIFAVALYGVSFV 433
Query: 57 RANFAAFRNKQLESLP--ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQV 114
+ F Q+ +P E+SE V + ++ V N + ++ G D+ FF++
Sbjct: 434 PSKIFGF---QVNKIPPWRFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWIKFFKI 490
Query: 115 VAYLWLLSAI 124
L+LL I
Sbjct: 491 AGSLYLLKLI 500
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 1 MGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANF 60
+GGG+ AD LLWK + + I + + F +G ++ S LL+ V +F
Sbjct: 379 LGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVASVFLFLHGIL 438
Query: 61 A-AFRNKQLESLP--ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 117
+E +P + +S++ ++ + S N + + G D+ FF+VV
Sbjct: 439 PEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALRSLCQGNDWSFFFKVVFV 498
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVD 156
L LS G+ S ++ IG ++ +Y + E +D
Sbjct: 499 LLALSLAGA-ISLHSIFVIGLPIAFLAFLVYEKKEQEID 536
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 97 LMAHDITVGKDFRLFF---------QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPAL 147
+ +H ++ R FF ++ ++L+ +G+ F+ TL +G + TVP L
Sbjct: 362 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 421
Query: 148 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 184
Y + +A++D+Y G++ +S H K + ++IP T
Sbjct: 422 YRQHQAQIDQYVGLVTNQLS-HIKA---KIRAKIPGT 454
>sp|P0C941|RTNLU_ARATH Reticulon-like protein B23 OS=Arabidopsis thaliana GN=RTNLB23 PE=2
SV=1
Length = 155
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 18 SFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLP-ELEV 76
+ G+++ T+ + LS+ SDVL++L+ + N + P E ++
Sbjct: 7 AIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPLEWQI 66
Query: 77 SEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYI 136
S++ N A + + G D RLF +VV L+ L+A+G S T+AY
Sbjct: 67 SQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVTIAYA 126
Query: 137 GTLL 140
G L
Sbjct: 127 GLCL 130
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 119 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 178
++L+ +G+ F+ TL +G + T+P LY + +A++D+Y G++ +S H K +
Sbjct: 466 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 521
Query: 179 SRIP 182
++IP
Sbjct: 522 AKIP 525
>sp|Q8GWH5|RTNLT_ARATH Reticulon-like protein B22 OS=Arabidopsis thaliana GN=RTNLB22 PE=2
SV=1
Length = 164
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 18 SFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLP----E 73
+ G+++ T+ + LS+ SDV ++L+ + FR + S+P E
Sbjct: 7 AMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLL--FRQLNV-SVPVDPLE 63
Query: 74 LEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTL 133
++S++ +N A + + G D RLF +VV L+ LSA+G S T+
Sbjct: 64 WQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVTV 123
Query: 134 AYIGTLL 140
AY G L
Sbjct: 124 AYAGLCL 130
>sp|Q6DR04|RTNLQ_ARATH Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2
SV=1
Length = 431
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 26/185 (14%)
Query: 7 ADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVC-------------SDVLLLLIVL 53
+D+++W+ V + W F L FLS C S++ L+L+
Sbjct: 169 SDLVMWRD--------VAKSTLWFGF--GCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCG 218
Query: 54 MFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQ 113
F +N+ + VSE+ V +A N+ + ++ G+ + +
Sbjct: 219 SFLSNTLCQRKNEDTKR--AFHVSEDDVLRSARRVLPATNFFISKTSELFSGEP-SMTLK 275
Query: 114 VVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVV 173
V +L L + G + + L+ G LS T+P LYS + ++ + + I + + V
Sbjct: 276 VTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVC 335
Query: 174 DENVI 178
I
Sbjct: 336 SHKKI 340
>sp|Q12443|RTN2_YEAST Reticulon-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RTN2 PE=1 SV=1
Length = 393
Score = 33.5 bits (75), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 109 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCG-----MIH 163
R F + L+ L + + FS T+ + T+ TVP +Y R +AR+DR +IH
Sbjct: 135 RNNFTIGVSLYFLHGLFAIFSMNTVLIMTTIFLYTVPLIYDRKQARIDRAIDRMKDLVIH 194
Query: 164 KSISQHYKVVD--ENVISRI--PRT 184
+ + KVV+ E I +I P+T
Sbjct: 195 RFHKNYNKVVEKTEPYIDKIIPPQT 219
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 167
++LL+ +G+ F+ T+ + + + T P LY + + +VD Y ++ K ++
Sbjct: 254 VYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKVN 303
>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2
Length = 717
Score = 32.0 bits (71), Expect = 2.2, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 36 GLPFLSVCSDVLLLLIVL-------MFFRANFAAFRNKQLESLPELEVSEEMVNN 83
G P+ +VC+ ++L+L+VL ++ R R++Q++S E+E + NN
Sbjct: 543 GFPWTAVCAGIILVLLVLIGGSVFVIYIRLKLQQ-RSQQIDSHSEIETMNNLTNN 596
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 118 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHK 164
++LL+ +G+ F+ T+ + + + T P LY + + +VD Y ++ K
Sbjct: 254 IYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSK 300
>sp|Q04947|RTN1_YEAST Reticulon-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RTN1 PE=1 SV=1
Length = 295
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 112 FQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVD 156
F+ L+LL S+FS +T+ ++ + + T+P +Y ++ +D
Sbjct: 128 FKTAVALFLLHKFFSWFSIWTIVFVADIFTFTLPVIYHSYKHEID 172
>sp|Q91YN9|BAG2_MOUSE BAG family molecular chaperone regulator 2 OS=Mus musculus GN=Bag2
PE=1 SV=1
Length = 210
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 55 FFRANFAAFRNKQL-ESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFR 109
F R++ A R+ +L ESL +LE+ E + +AA + + LL M H I +D R
Sbjct: 15 FCRSSSMADRSSRLLESLDQLELRVEALRDAATAVEQEKEILLEMIHSIQNSQDMR 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.141 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,929,878
Number of Sequences: 539616
Number of extensions: 2173508
Number of successful extensions: 7286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7232
Number of HSP's gapped (non-prelim): 55
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)