BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029575
(191 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 72 VRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTV 131
+ S G+ IT++EF + VLK+E+PVLV F A+WCGPC+L++P + A Y DRL V
Sbjct: 1 METAMSKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKV 60
Query: 132 VKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDS 187
VK++ D NP +++YKV G+P L L K G+++ +S EG I+K KL ++DT L++
Sbjct: 61 VKLEIDPNPTTVKKYKVEGVPALRLVK-GEQILDS-TEGVISKDKLLSFLDTHLNN 114
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +TE F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTEDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP +E +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A+EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHVTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 70
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 71 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 117
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFETDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SEKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGDVA--ATKVGALSKGQLKEFLDANL 107
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 76 ASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID 135
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 GSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN 60
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 IDQNPGTAPKYGIRGTPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ACKVGALSKGQLKEFLDANL 107
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A +Y +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC ++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D N
Sbjct: 4 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 63
Query: 140 PQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
P +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 64 PGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+L+A ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Query: 73 RCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVV 132
R S I +T+ F VLK++ +LV+F A WCGP +++AP ++ +A EY +LTV
Sbjct: 17 RGSHSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVA 76
Query: 133 KIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
K++ D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 77 KLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 127
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + +PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRSIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LK ++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKCFLDANL 107
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCG C+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 182
D NP +Y + G+PTL+LFKNG+ + + GA++K +LK ++D
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKCFLD 104
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHD 137
S ++T++ F VL S +PVLV+F A WCGPC++VAP +E +A E LTV K+D D
Sbjct: 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKL 177
NP+ ++V +PTLILFK+GQ P R GA K L
Sbjct: 67 TNPETARNFQVVSIPTLILFKDGQ--PVKRIVGAKGKAAL 104
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WCGP +++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHD 137
S ++T++ F VL S +PVLV+F A WCGPC++VAP +E +A E LTV K+D D
Sbjct: 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 71
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKL 177
NP+ ++V +PTLILFK+GQ P R GA K L
Sbjct: 72 TNPETARNFQVVSIPTLILFKDGQ--PVKRIVGAKGKAAL 109
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCG-PCRLVAPAVEWLAQEYGDRLTVVKID 135
S I +T+ F VLK++ +LV+F A WCG PC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLN 60
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 IDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
+ E+T+ F VLKS++PVLV+F A WCGPCR++AP +E LA+EY ++ VVK++ D N
Sbjct: 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDEN 62
Query: 140 PQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
P +Y + +PTL+LFKNGQ V R GA K LKE ID L
Sbjct: 63 PNTAAQYGIRSIPTLLLFKNGQVV--DRLVGAQPKEALKERIDKHL 106
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F ++K++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDLVKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYIERGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHD 137
S ++T++ F VL S +PVLV+F A WCGP ++VAP +E +A E LTV K+D D
Sbjct: 9 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVD 68
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKL 177
NP+ ++V +PTLILFK+GQ P R GA K L
Sbjct: 69 TNPETARNFQVVSIPTLILFKDGQ--PVKRIVGAKGKAAL 106
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 93.2 bits (230), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WC C+++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I +T+ F VLK++ +LV+F A WC +++AP ++ +A EY +LTV K++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D L
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 107
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGP--------------CRLVAPAVEWLA 122
S I +T+ F VLK++ +LV+F A WCGP C+++AP ++ +A
Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIA 61
Query: 123 QEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 182
EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K +LKE++D
Sbjct: 62 DEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLD 119
Query: 183 TLL 185
L
Sbjct: 120 ANL 122
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
+ +T+ F VLK+++PVLV+F A WCGPCR +AP++E +A EYGD++ +VK++ D N
Sbjct: 7 LKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDEN 66
Query: 140 PQLIEEYKVYGLPTLILFKNGQ 161
P +Y V +PTL +++ G+
Sbjct: 67 PGTAAKYGVMSIPTLNVYQGGE 88
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+ + F N VL+S PVLV+F A WCGPCR++AP V+ +A EY D+L VK++ D +P +
Sbjct: 6 VNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNV 65
Query: 143 IEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLD 186
EY + +PT+++FK G++ GA+ K + + ++ L+
Sbjct: 66 ASEYGIRSIPTIMVFKGGKKC--ETIIGAVPKATIVQTVEKYLN 107
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
+ ++ +S + VL+SE PV+V+F A WCGPC+L+AP ++ LA+EY ++ V K++ D
Sbjct: 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA 61
Query: 140 PQLIEEYKVYGLPTLILFKNGQEVPESRRE---GAITKLKLKEYIDTLL 185
P + +Y + +PT++ FKNG+ R+E GA+ K L + I+ L
Sbjct: 62 PGIATQYNIRSIPTVLFFKNGE-----RKESIIGAVPKSTLTDSIEKYL 105
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Query: 82 EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQ 141
++ +S + VL+SE PV+V+F A WCGPC+L+AP ++ LA+EY ++ V K++ D P
Sbjct: 3 DVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG 62
Query: 142 LIEEYKVYGLPTLILFKNGQEVPESRRE---GAITKLKLKEYIDTLL 185
+ +Y + +PT++ FKNG+ R+E GA+ K L + I+ L
Sbjct: 63 IATQYNIRSIPTVLFFKNGE-----RKESIIGAVPKSTLTDSIEKYL 104
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+++S F VLK+ VLV+F A WCGPC+++ PA+ + +E+ ++TV K++ D NP+
Sbjct: 7 VSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPET 66
Query: 143 IEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDT 183
Y+V +PTL+L ++G+ + ++ GA+ K +LK ++++
Sbjct: 67 PNAYQVRSIPTLMLVRDGKVI--DKKVGALPKSQLKAWVES 105
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+T++ F ++ ++PVLV+F A WCGPCR++AP +E A+ + D++TV K++ D NP+
Sbjct: 5 LTDANF-QQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 143 IEEYKVYGLPTLILFKNGQEV 163
++ + +PTLILFK G+ V
Sbjct: 64 TSQFGIMSIPTLILFKGGEPV 84
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+T++ F ++ ++PVLV+F A WCGPCR++AP +E A+ + D++TV K++ D NP+
Sbjct: 5 LTDANF-QQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 143 IEEYKVYGLPTLILFKNGQEV 163
++ + +PTLILFK G+ V
Sbjct: 64 TSQFGIMSIPTLILFKGGRPV 84
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
+ ++ +S + VL+SE PV+V+F A WCGP +L+AP ++ LA+EY ++ V K++ D
Sbjct: 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEA 61
Query: 140 PQLIEEYKVYGLPTLILFKNGQEVPESRRE---GAITKLKLKEYIDTLL 185
P + +Y + +PT++ FKNG+ R+E GA+ K L + I+ L
Sbjct: 62 PGIATQYNIRSIPTVLFFKNGE-----RKESIIGAVPKSTLTDSIEKYL 105
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI 134
G+ I ++T+++F + V + LV+F A WCGPC+++AP +E LA +Y + ++K+
Sbjct: 1 GSHMAIVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKL 58
Query: 135 DHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D D NP +Y+V +PTLI+FK+GQ P + G K L E +D L
Sbjct: 59 DVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLDKHL 107
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+T++ F ++ + PVLV+F A WCGPCR++AP +E A+ + D++TV K++ D NP+
Sbjct: 5 LTDANF-QQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 143 IEEYKVYGLPTLILFKNGQEV 163
++ + +PTLILFK G+ V
Sbjct: 64 TSQFGIMSIPTLILFKGGEPV 84
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+T++ F ++ + PVLV+F A WCGPCR++AP +E A+ + D++TV K++ D NP+
Sbjct: 5 LTDANF-QQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 143 IEEYKVYGLPTLILFKNGQEV 163
++ + +PTLILFK G+ V
Sbjct: 64 TSQFGIMSIPTLILFKGGRPV 84
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 82 EITESEFPNTVLKSERP-VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANP 140
E+T+ F T+ + P VLV+F A WC PCR +AP +E +A+EY +L V K+D D NP
Sbjct: 6 EVTDQNFDETL--GQHPLVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENP 63
Query: 141 QLIEEYKVYGLPTLILFKNGQEV 163
+ Y+V +PT+ILFK+GQ V
Sbjct: 64 KTAXRYRVXSIPTVILFKDGQPV 86
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 82 EITESEFPNTVLKSERP-VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANP 140
E+T+ F T+ + P VLV+F A WC PCR +AP +E +A+EY +L V K+D D NP
Sbjct: 5 EVTDQNFDETL--GQHPLVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENP 62
Query: 141 QLIEEYKVYGLPTLILFKNGQEV 163
+ Y+V +PT+ILFK+GQ V
Sbjct: 63 KTAXRYRVXSIPTVILFKDGQPV 85
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI 134
G+ I ++T+++F + V + LV+F A WCG C+++AP +E LA +Y + ++K+
Sbjct: 1 GSHMAIVKVTDADFDSKVESGVQ--LVDFWATWCGTCKMIAPVLEELAADYEGKADILKL 58
Query: 135 DHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D D NP +Y+V +PTLI+FK+GQ P + G K L E +D L
Sbjct: 59 DVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLDKHL 107
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 76 ASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID 135
S I ++T+++F + V + LV+F A WCG C+++AP +E LA +Y + ++K+D
Sbjct: 1 GSHAIVKVTDADFDSKVESGVQ--LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLD 58
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D NP +Y+V +PTLI+FK+GQ P + G K L E +D L
Sbjct: 59 VDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLDKHL 106
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 13/119 (10%)
Query: 78 SGITEITESEFPNTVLKSE-----------RPVLVEFVANWCGPCRLVAPAVEWLAQEYG 126
SG +T +EF + E +P +V+F A+WCGPC++VAP +E L++EY
Sbjct: 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA 81
Query: 127 DRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
++ + K++ D P+L ++ + G+PT I F + P+ GA++K +LK YID +L
Sbjct: 82 GKIYIYKVNVDKEPELARDFGIQGIPT-IWFVPMKGEPQVNM-GALSKEQLKGYIDKVL 138
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
SE VL +F A WCGPC+++AP +E L QE GD+L +VKID D N + +Y V +PTL
Sbjct: 16 SEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTL 75
Query: 155 ILFKNGQEVPES 166
++ K+G+ V S
Sbjct: 76 LVLKDGEVVETS 87
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 13/119 (10%)
Query: 78 SGITEITESEFPNTVLKSE-----------RPVLVEFVANWCGPCRLVAPAVEWLAQEYG 126
SG +T +EF + E +P +V+F A+WCGPC++VAP +E L++EY
Sbjct: 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA 81
Query: 127 DRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
++ + K++ D P+L ++ + +PT I F + P+ GA++K +LK YID +L
Sbjct: 82 GKIYIYKVNVDKEPELARDFGIQSIPT-IWFVPMKGEPQVNM-GALSKEQLKGYIDKVL 138
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 79 GITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDA 138
I ++T+++F + V + LV+F A CGPC+++AP +E LA +Y + ++K+D D
Sbjct: 4 AIVKVTDADFDSKVESGVQ--LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE 61
Query: 139 NPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
NP +Y+V +PTLI+FK+GQ P + G K L E +D L
Sbjct: 62 NPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLDKHL 106
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI 134
G+ I ++T+++F + V + LV+F A WCG +++AP +E LA +Y + ++K+
Sbjct: 1 GSHMAIVKVTDADFDSKVESGVQ--LVDFWATWCGTSKMIAPVLEELAADYEGKADILKL 58
Query: 135 DHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
D D NP +Y+V +PTLI+FK+GQ P + G K L E +D L
Sbjct: 59 DVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLDKHL 107
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 74 CGASSG----ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRL 129
CGA + E E F V + LV+F A WCGPCRLV+P +E LA+++ RL
Sbjct: 25 CGACKTPLPWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRL 83
Query: 130 TVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDS 187
VVK++ D +P L Y V +PTL+LF+ G P + GA + L+E + L+
Sbjct: 84 KVVKVNVDEHPGLAARYGVRSVPTLVLFRRG--APVATWVGASPRRVLEERLRPYLEG 139
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
SE VL +F A WCGP +++AP +E L QE GD+L +VKID D N + +Y V +PTL
Sbjct: 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTL 75
Query: 155 ILFKNGQEVPES 166
++ K+G+ V S
Sbjct: 76 LVLKDGEVVETS 87
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
SE VL +F A WCGP +++AP +E L QE GD+L +VKID D N + +Y V +PTL
Sbjct: 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTL 75
Query: 155 ILFKNGQEVPES 166
++ K+G+ V S
Sbjct: 76 LVLKDGEVVETS 87
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
+ SE+ + + ++ V+V+F A WCGPC+++AP +E A++Y D K+D D +
Sbjct: 14 SASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDA-AFYKLDVDEVSDVA 72
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTLI +K G+EV
Sbjct: 73 QKAEVSSMPTLIFYKGGKEV 92
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
+ SE+ + + ++ V+V+F A WCGPC+++AP +E A++Y D K+D D +
Sbjct: 7 SASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDA-AFYKLDVDEVSDVA 65
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTLI +K G+EV
Sbjct: 66 QKAEVSSMPTLIFYKGGKEV 85
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + +Y + G+PTL
Sbjct: 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDAQDVAPKYGIRGIPTL 77
Query: 155 ILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
+LFKNG+ + + GA++K +LKE++D L
Sbjct: 78 LLFKNGEVA--ATKVGALSKGQLKEFLDANL 106
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 49 LFGSRTNLSLK------SYNNSLP--KLAIRVRCGASSG--ITEITESEFPNTVLKSER- 97
+ G++ SL+ N +P +LA +CG IT P + ++ER
Sbjct: 4 MMGAKMAESLRLTCLACGQANKVPSDRLAAGPKCGICGAGLITGKVAGIDPAILARAERD 63
Query: 98 --PVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
P+LV+F A WCGPCR +AP + A ++ + KID A+P + +++ G+P I
Sbjct: 64 DLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFI 123
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLLDS 187
LF G+E+ +R GA +L ++ L +
Sbjct: 124 LFHKGREL--ARAAGARPASELVGFVRGKLGA 153
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 87 EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEY 146
+F + V+ SE PV+V+F A WCGPC+++ P +E + + ++ + K+D D + L EY
Sbjct: 22 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEY 81
Query: 147 KVYGLPTLILFKNGQEV 163
+V +PT++ KNG V
Sbjct: 82 EVSAVPTVLAMKNGDVV 98
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
T SEF ++ + ++ V+V+F A WCGPC+++AP +E +++Y + K+D D +
Sbjct: 7 TASEF-DSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVA 64
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTL+LFKNG+EV
Sbjct: 65 QKNEVSAMPTLLLFKNGKEV 84
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
T SEF ++ + ++ V+V+F A WCGPC+++AP +E +++Y + K+D D +
Sbjct: 13 TASEF-DSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVA 70
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTL+LFKNG+EV
Sbjct: 71 QKNEVSAMPTLLLFKNGKEV 90
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 97 RPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLIL 156
R ++V+F A WCGPCR +AP VE LA+E + + K+D D N + +Y V +PT +
Sbjct: 20 RLIVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQNEEAAAKYSVTAMPTFVF 78
Query: 157 FKNGQEVPESRREGAITKLKLKEYI 181
K+G+EV R GA + KL+E I
Sbjct: 79 IKDGKEV--DRFSGA-NETKLRETI 100
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 73 RCGASSGITEI--TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLT 130
RCG S E+ +E + +L+ + P +++F A WCGPCR AP A E ++
Sbjct: 30 RCGHSLFDGEVINATAETLDKLLQDDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVR 89
Query: 131 VVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
VK++ +A P L +++ +PT+ L++NG+ + GA+ K ++D L
Sbjct: 90 FVKVNTEAEPALSTRFRIRSIPTIXLYRNGKXI--DXLNGAVPKAPFDNWLDEQL 142
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 94 KSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPT 153
+ ++P +V+F A+WCGPC++VAP ++ LA+EY ++ + K+D + +L + + +P+
Sbjct: 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPS 95
Query: 154 LILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
ILF + PE +GA+ K K+ ID L
Sbjct: 96 -ILFIPMEGKPE-MAQGAMPKASFKKAIDEFL 125
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
+ SE+ + + ++ V+V+F A WCGP +++AP +E A++Y D K+D D +
Sbjct: 15 SASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYSDA-AFYKLDVDEVSDVA 73
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTLI +K G+EV
Sbjct: 74 QKAEVSSMPTLIFYKGGKEV 93
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
+ SE+ + + ++ V+V+F A WCGP +++AP +E A++Y D K+D D +
Sbjct: 7 SASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYSDA-AFYKLDVDEVSDVA 65
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTLI +K G+EV
Sbjct: 66 QKAEVSSMPTLIFYKGGKEV 85
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 92 VLKSERPVLVEFVANWCGPCRLVAPAVEWLAQE-YGDRLTVVKIDHDANPQLIEEYKVYG 150
V ++ V+++F A WCGPC+++ P E ++ GD++ K+D D Q+ +E +
Sbjct: 29 VTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA 88
Query: 151 LPTLILFKNGQEVPE------SRREGAITK 174
+PT + FKNGQ++ S+ + AIT+
Sbjct: 89 MPTFVFFKNGQKIDTVVGADPSKLQAAITQ 118
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
S + V+++F A WCGPC++++P + L+ ++ D + V+K+D D + EY + +PT
Sbjct: 24 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTF 83
Query: 155 ILFKNGQEVPE 165
+ KNG +V E
Sbjct: 84 VFLKNGVKVEE 94
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
S + V+++F A WCGPC++++P + L+ ++ D + V+K+D D + EY + +PT
Sbjct: 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTF 78
Query: 155 ILFKNGQEVPE 165
+ KNG +V E
Sbjct: 79 VFLKNGVKVEE 89
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 90 NTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVY 149
++ L S +V+F A WC PC ++AP +E LA++Y ++ K++ D NP + Y V
Sbjct: 10 DSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-QVGFGKLNSDENPDIAARYGVM 68
Query: 150 GLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 185
LPT+I FK+G+ V E GA+ + +++ I LL
Sbjct: 69 SLPTVIFFKDGEPVDEII--GAVPREEIEIRIKNLL 102
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
T SEF ++ + ++ V+V+F A WCGP +++AP +E +++Y + K+D D +
Sbjct: 13 TASEF-DSAIAQDKLVVVDFYATWCGPSKMIAPMIEKFSEQYP-QADFYKLDVDELGDVA 70
Query: 144 EEYKVYGLPTLILFKNGQEV 163
++ +V +PTL+LFKNG+EV
Sbjct: 71 QKNEVSAMPTLLLFKNGKEV 90
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 78 SGITEITE-SEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
+ IT++T +EF N + ++++ ++++F A WCGPC+++ P + L Q Y D + VK D
Sbjct: 12 TSITKLTNLTEFRNLIKQNDK-LVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDV 69
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQ 161
D +P + +E +V +PT +L K+GQ
Sbjct: 70 DESPDIAKECEVTAMPTFVLGKDGQ 94
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI 134
G+S + +TE+ F +T+ +E ++F A WCG C+ +AP E L+++ L VKI
Sbjct: 4 GSSGTVLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKI 61
Query: 135 ---DHDANPQLIEEYKVYGLPTLILFKNGQEVPE 165
D A + +Y V G PTL+LF+ G++V E
Sbjct: 62 AEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSE 95
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 97 RPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLIL 156
+ V+++F A WCGPC+++AP +E L+Q D + +K+D D + ++ ++ +PT +
Sbjct: 21 KLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECEDIAQDNQIACMPTFLF 79
Query: 157 FKNGQEV 163
KNGQ++
Sbjct: 80 MKNGQKL 86
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
+++EF ++++ V+V+F A WCGPC+ +AP E ++ Y ++ +K+D D ++
Sbjct: 15 SQAEF-DSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVT 72
Query: 144 EEYKVYGLPTLILFKNGQEV 163
E+ + +PT ++KNG V
Sbjct: 73 EKENITSMPTFKVYKNGSSV 92
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 75 GASSGITEITESEFPNTVLKSERP--VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVV 132
G+ S + E+ + ++L+ + V+V+F A WCGPC+ +AP + L+++Y V
Sbjct: 1 GSMSKLIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFV 58
Query: 133 KIDHDANPQLIEEYKVYGLPTLILFKNGQEVPE 165
K+D D + +Y + +PT I KNG++V +
Sbjct: 59 KVDVDKLEETARKYNISAMPTFIAIKNGEKVGD 91
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLA------QEYGDR 128
G+S + E+T+ F VL SE +VEF A WCG C+ + P EW A ++ +
Sbjct: 4 GSSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEP--EWAAAASEVKEQTKGK 61
Query: 129 LTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQ 161
+ + +D N L Y + G PT+ +F+ G+
Sbjct: 62 VKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE 94
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 78 SGITEITESEFPNTV--LKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID 135
S + E+T+ F + + S +LVEF A WCG C+ +AP E A + + K+D
Sbjct: 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVD 60
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEV 163
AN +Y V G PTL +F++G+E
Sbjct: 61 CTANTNTCNKYGVSGYPTLKIFRDGEEA 88
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI-- 134
S + +TE+ F +T+ +E ++F A WCG C+ +AP E L+++ L VKI
Sbjct: 4 GSTVLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAE 61
Query: 135 -DHDANPQLIEEYKVYGLPTLILFKNGQEVPE 165
D A + +Y V G PTL+LF+ G++V E
Sbjct: 62 VDCTAERNICSKYSVRGYPTLLLFRGGKKVSE 93
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDR--LTVV 132
G+S + + F V+ ++ VL+EF A WCG C+ + P L ++Y + L +
Sbjct: 4 GSSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIA 63
Query: 133 KIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLK-LKEYID 182
K+D AN ++YKV G PT+ +G + + EG L+ L ++ID
Sbjct: 64 KMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFID 114
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
V+V+F A WCGPC+ +AP + L+++Y VK+D D + +Y + +PT I K
Sbjct: 36 VVVDFFATWCGPCKTIAPLFKELSEKYD--AIFVKVDVDKLEETARKYNISAMPTFIAIK 93
Query: 159 NGQEV 163
NG++V
Sbjct: 94 NGEKV 98
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI---DH 136
+ +TE+ F +T+ +E ++F A WCG C+ +AP E L+++ L VKI D
Sbjct: 2 VLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC 59
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPE 165
A + +Y V G PTL+LF+ G++V E
Sbjct: 60 TAERNICSKYSVRGYPTLLLFRGGKKVSE 88
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 76 ASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID 135
+S + E+T S F V++S+ LVEF A WCG C+ + P + A D + V ++
Sbjct: 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVN 74
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEVPESRREG 170
D + L +Y V G PT+ +F + PE + G
Sbjct: 75 ADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGG 109
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+TE F + V+++ + VLV+ A WC PC L P + +A++Y + +++ D N ++
Sbjct: 9 LTEENF-DEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKI 67
Query: 143 IEEYKVYGLPTLILFKNGQEV 163
++Y V +PT ++F NGQ V
Sbjct: 68 ADKYSVLNIPTTLIFVNGQLV 88
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 85 ESEFPNTVLKSE---RPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQ 141
+ EF + K++ + V+++F A+WCGPCR +AP A+++ + +K+D D +
Sbjct: 22 KDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKE 80
Query: 142 LIEEYKVYGLPTLILFKNGQE 162
+ E+Y V +PT + K+G E
Sbjct: 81 VAEKYNVEAMPTFLFIKDGAE 101
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
V+++F A+WCGPCR++AP A+++ + +K+D D + E Y V +PT + K
Sbjct: 31 VIIDFTASWCGPCRVIAPVFAEYAKKFPGAI-FLKVDVDELKDVAEAYNVEAMPTFLFIK 89
Query: 159 NGQEVPE---SRREGAITKL 175
+G++V R++ TK+
Sbjct: 90 DGEKVDSVVGGRKDDIHTKI 109
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
S++ ++V+F A+WC PC+++AP LA+++ + +T +K+D D + EE+ V +PT
Sbjct: 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAEEWNVEAMPTF 83
Query: 155 ILFKNGQEVPES 166
I K+G+ V ++
Sbjct: 84 IFLKDGKLVDKT 95
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 76 ASSGIT-EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDR---LTV 131
SSG+T +T+ F + V+ + +LVEF A WCG C+ +AP E A+E R + +
Sbjct: 4 GSSGVTLSLTKDNF-DDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPL 62
Query: 132 VKIDHDANPQLIEEYKVYGLPTLILFKNGQ 161
K+D L + + V G PTL +F+ G+
Sbjct: 63 AKVDATEQTDLAKRFDVSGYPTLKIFRKGR 92
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDAQDVASEAEVKATPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASEXEVKCMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKCMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI 134
G+S + + F + ++ V VEF A WCG C+ +AP + L + Y D +V
Sbjct: 4 GSSGPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIA 63
Query: 135 DHDANPQLIEEYKVYGLPTLILF 157
D+ +E KV+ PTL F
Sbjct: 64 KMDSTANEVEAVKVHSFPTLKFF 86
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
+++ V+++F A+WCGPCR++AP LA+++ + + +K+D D + E++ V +PT
Sbjct: 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAV-FLKVDVDELKPIAEQFSVEAMPTF 91
Query: 155 ILFKNGQEVPESRREGAI 172
+ K G + R GAI
Sbjct: 92 LFMKEGD--VKDRVVGAI 107
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
V+V+F A WC PC ++AP +E LA +Y ++ K++ + + + Y + LPT++ FK
Sbjct: 26 VVVDFWAEWCAPCLILAPVIEELANDYP-QVAFGKLNTEESQDIAMRYGIMSLPTIMFFK 84
Query: 159 NGQEVPESRREGAITKLKLKEYIDTLLD 186
NG+ V + GA+ + +++ + +LL+
Sbjct: 85 NGELVDQIL--GAVPREEIEVRLKSLLE 110
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGP +++ P L+++Y + + +++D D + + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDSQDVASESEVKSMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
+++ F A WC C + + ++ L + YG R+ ++K+D D N L ++ V LPT+IL K
Sbjct: 45 IVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLK 104
Query: 159 N 159
N
Sbjct: 105 N 105
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKCTPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLA-----QEYGDRL 129
G+ +T + + VL + VL+EF A WCG C+ +AP E L E+ DR+
Sbjct: 4 GSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRV 63
Query: 130 TVVKIDHDAN--PQLIEEYKVYGLPTLILFKNGQE 162
+ K+D AN P I+ G PT+ L+ G +
Sbjct: 64 VIAKVDATANDVPDEIQ-----GFPTIKLYPAGAK 93
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 78 SGITEITESEFPNTV--LKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID 135
S + E+T+ F + + S +LVEF A WCG + +AP E A + + K+D
Sbjct: 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVD 60
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEV 163
AN +Y V G PTL +F++G+E
Sbjct: 61 CTANTNTCNKYGVSGYPTLKIFRDGEEA 88
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 88 FPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGD--RLTVVKIDHDANPQLIEE 145
F V + VL+EF A WCG C+ + P + L ++ + + K+D AN +
Sbjct: 362 FDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSP 420
Query: 146 YKVYGLPTLILFKNGQEVPESRREGA 171
Y+V G PT+ +++ + EG
Sbjct: 421 YEVRGFPTIYFSPANKKLNPKKYEGG 446
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 88 FPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYK 147
F + ++ V VEF A WCG C+ +AP + L + Y D +V D+ +E K
Sbjct: 259 FEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVK 318
Query: 148 VYGLPTLILF 157
V+ PTL F
Sbjct: 319 VHSFPTLKFF 328
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D + + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVNDCQDVASECEVKCMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
+P++V+F A WCGPC+++AP E L+ +Y ++ +K+D DA + E + +PT
Sbjct: 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFH 83
Query: 156 LFKNG 160
++K+G
Sbjct: 84 VYKDG 88
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
S I E + + V S++PV+V F + C C+ P E A+EYG +I+
Sbjct: 5 GSSIIEFEDXTWSQQVEDSKKPVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINI 64
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPE 165
NP E+Y V G PT F +G+ V E
Sbjct: 65 ATNPWTAEKYGVQGTPTFKFFCHGRPVWE 93
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDR---LTVVKI 134
+G+ + + F N V + VL+EF A WCG C+ AP E +A D + V KI
Sbjct: 17 NGVWVLNDGNFDNFVADKDT-VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKI 75
Query: 135 DHDANPQLIEEYKVYGLPTLILFKNGQEV 163
D + L ++ V G PT+ + K GQ V
Sbjct: 76 DATSASMLASKFDVSGYPTIKILKKGQAV 104
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDR---LTVVKIDHDANPQLIEEYKVYGLPTLI 155
+LVEF A WCG C+ +AP E A+E R + + K+D A L + + V G PTL
Sbjct: 150 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLK 209
Query: 156 LFKNGQ 161
+F+ G+
Sbjct: 210 IFRKGR 215
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDR---LTVVKI 134
+G+ + ++ F N V + VL+EF A WCG C+ AP E +A D+ + V KI
Sbjct: 15 NGVLVLNDANFDNFVADKDT-VLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKI 73
Query: 135 DHDANPQLIEEYKVYGLPTLILFKNGQEV 163
D + L + V G PT+ + K GQ V
Sbjct: 74 DATSASVLASRFDVSGYPTIKILKKGQAV 102
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGP +++ P L+++Y + + +++D D + E +V +PT
Sbjct: 31 DKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQ 89
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 90 FFKKGQKVGE--FSGA-NKEKLEATINELV 116
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 80 ITEITESEF-PNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID-HD 137
+TE+ + F P ++PV+++ WCGPC+ +AP E LA+EY D + +K+D +
Sbjct: 8 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQ 66
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDSISVA 191
N L +E + +PT + K V G +T K D LL++I A
Sbjct: 67 ENKTLAKELGIRVVPTFKILKENSVV------GEVTGAKY----DKLLEAIQAA 110
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
+P++V F A WCGPC+++AP E L+ +Y ++ +K+D DA + E + +PT
Sbjct: 24 HKPIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFH 83
Query: 156 LFKNG 160
++K+G
Sbjct: 84 VYKDG 88
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 80 ITEITESEF-PNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID-HD 137
+TE+ + F P ++PV+++ WCGPC+ +AP E LA+EY D + +K+D +
Sbjct: 20 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQ 78
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDSISVA 191
N L +E + +PT + K V G +T K D LL++I A
Sbjct: 79 ENKTLAKELGIRVVPTFKILKENSVV------GEVTGAKY----DKLLEAIQAA 122
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGP +++ P L+++Y + + +++D D + E +V PT
Sbjct: 20 DKLVVVDFSATWCGPAKMIKPFFHSLSEKYSN-VIFLEVDVDDAQDVASEAEVKATPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 94 KSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPT 153
+S+ V+V+F A+WCGPCR +AP LA++ + L +K+D D + ++ + +PT
Sbjct: 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL-FLKVDTDELKSVASDWAIQAMPT 94
Query: 154 LILFKNGQ 161
+ K G+
Sbjct: 95 FMFLKEGK 102
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 92 VLKSERPVLVEFVANWCGPCRLVAPAVEWLA---QEYGDRLTVVKIDHDANPQLIEEYKV 148
L + + +LVEF A WCG C+ +AP A + G + + K+D L ++Y V
Sbjct: 20 ALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV 79
Query: 149 YGLPTLILFKNGQ 161
G PT+ F+NG
Sbjct: 80 RGYPTIKFFRNGD 92
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGP +++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKRMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAP----AVEWLAQEYGDRLTVV 132
S + ++ F N ++S VL EF A WCG C+ +AP A E L ++ +T+
Sbjct: 13 DSAVVKLATDSF-NEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK---NITLA 68
Query: 133 KIDHDANPQLIEEYKVYGLPTLILFKN 159
+ID N L E+ + G P+L +FKN
Sbjct: 69 QIDCTENQDLCMEHNIPGFPSLKIFKN 95
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLT---VVKIDHDANPQLIEEYKVYGLP 152
++ VLV + A WCG C+ +AP + LA Y + + + K+DH N + + G P
Sbjct: 376 KKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND--VRGVVIEGYP 433
Query: 153 TLILFKNGQEVPESRREGAITKLKLKEYIDTLLDSI 188
T++L+ G++ +G+ + +D+L D I
Sbjct: 434 TIVLYPGGKKSESVVYQGSRS-------LDSLFDFI 462
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 82 EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQ 141
++T F VL+ + +V+F A WCGPC+ AP E LA+ ++ K+D A PQ
Sbjct: 7 DLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ 66
Query: 142 LIEEYKVYGLPTLILFK 158
++ + P++ L++
Sbjct: 67 TCQKAGIKAYPSVKLYQ 83
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 95 SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
+++ V+++F A+WCGP R++AP LA+++ + + +K+D D + E++ V +PT
Sbjct: 36 AKKLVVIDFTASWCGPSRIMAPVFADLAKKFPNAV-FLKVDVDELKPIAEQFSVEAMPTF 94
Query: 155 ILFKNGQEVPESRREGAI 172
+ K G + R GAI
Sbjct: 95 LFMKEGD--VKDRVVGAI 110
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A WCGPC+++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDXQDVASEXEVKCMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|3QDN|A Chain A, Putative Thioredoxin Protein From Salmonella Typhimurium
pdb|3QDN|B Chain B, Putative Thioredoxin Protein From Salmonella Typhimurium
Length = 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 80 ITEITESEFPNTVLKSER-PVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDA 138
I I ES T+ +S PVL F + C + P +E LA +Y + + K+D DA
Sbjct: 9 IVNINESNLQQTLEQSXTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDA 68
Query: 139 NPQLIEEYKVYGLPTLILFKNGQEV 163
+ ++ + +PT+ LF+NGQ V
Sbjct: 69 EQXIAAQFGLRAIPTVYLFQNGQPV 93
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 80 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGD--RLTVVKIDHD 137
I+E+T F + + LVEF A WCG C+ ++ A+ ++ V D +
Sbjct: 19 ISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLN 78
Query: 138 ANPQLIEEYKVYGLPTLILFK 158
N L +Y V G PTL++F+
Sbjct: 79 KNKALCAKYDVNGFPTLMVFR 99
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
VL F A WCGPC+ +AP L++ Y + +V ID D +++ PT +
Sbjct: 49 VLANFSARWCGPCKQIAPYYIELSENYPSLMFLV-IDVDELSDFSASWEIKATPTFFFLR 107
Query: 159 NGQEVPESRREGAITKLKLKEYIDTLLDSI 188
+GQ+V + GA K +L + I +LDS+
Sbjct: 108 DGQQV--DKLVGA-NKPELHKKITAILDSL 134
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 69 AIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDR 128
IR+R S + + +F N ++ + + F A WCGPC+ + +E +A E+
Sbjct: 11 GIRMRARYPSVVDVYSVEQFRN-IMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PT 68
Query: 129 LTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQ 161
+ K+D D N +++ + +V LPT I+ ++G+
Sbjct: 69 VKFAKVDADNNSEIVSKCRVLQLPTFIIARSGK 101
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQL 142
+++S+F V + P+++ F +WC PC+ + P E +A + + +D + +
Sbjct: 4 LSDSDFQLEVRQHPDPIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDAEKT 63
Query: 143 IEEYKVYGLPTLILFKNG--QEVPESRREGAITKLKLKEYID 182
+ E + LP+L LF +G +EV G + K L+ +I+
Sbjct: 64 MAELNIRTLPSLALFVDGMIREV----FSGTMNKSDLRYWIN 101
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 80 ITEITESEF-PNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID-HD 137
+TE+ + F P ++PV+++ WCGP + +AP E LA+EY D + +K+D +
Sbjct: 7 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQ 65
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDSISVA 191
N L +E + +PT + K V G +T K D LL++I A
Sbjct: 66 ENKTLAKELGIRVVPTFKILKENSVV------GEVTGAKY----DKLLEAIQAA 109
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 84 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLI 143
T N + ++ VLV+F A WCGPC+ + + +A+ D +T +K+D D N
Sbjct: 11 THEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKD-VTFIKVDVDKNGNAA 69
Query: 144 EEYKVYGLPTLILFKN-GQEV 163
+ Y V +P L K G E+
Sbjct: 70 DAYGVSSIPALFFVKKEGNEI 90
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLI 155
++ V+V+F A W GP +++ P L+++Y + + +++D D + E +V +PT
Sbjct: 20 DKLVVVDFSATWSGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKCMPTFQ 78
Query: 156 LFKNGQEVPESRREGAITKLKLKEYIDTLL 185
FK GQ+V E GA K KL+ I+ L+
Sbjct: 79 FFKKGQKVGEFS--GA-NKEKLEATINELV 105
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 80 ITEITESEFPNTVLKS-ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDA 138
I I ES + +S PVL F + C + P +E LA +Y + + K+D DA
Sbjct: 9 IVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA 68
Query: 139 NPQLIEEYKVYGLPTLILFKNGQEV 163
+ ++ + +PT+ LF+NGQ V
Sbjct: 69 EQMIAAQFGLRAIPTVYLFQNGQPV 93
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
VL F A WCGP R +AP L++ Y + +V ID D +++ PT +
Sbjct: 49 VLANFSARWCGPSRQIAPYYIELSENYPSLMFLV-IDVDELSDFSASWEIKATPTFFFLR 107
Query: 159 NGQEVPESRREGAITKLKLKEYIDTLLDSI 188
+GQ+V + GA K +L + I +LDS+
Sbjct: 108 DGQQV--DKLVGA-NKPELHKKITAILDSL 134
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 93 LKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLP 152
LK++ ++V F A W C + + LA+E +++ VK++ + P++ E+Y++ +P
Sbjct: 29 LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPEVSEKYEISSVP 87
Query: 153 TLILFKNGQEVPESRREGA 171
T + FKN Q++ R +GA
Sbjct: 88 TFLFFKNSQKI--DRLDGA 104
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 93 LKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLP 152
LK++ ++V F A W C + + LA+E +++ VK++ + P++ E+Y++ +P
Sbjct: 35 LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPEVSEKYEISSVP 93
Query: 153 TLILFKNGQEVPESRREGA 171
T + FKN Q++ R +GA
Sbjct: 94 TFLFFKNSQKI--DRLDGA 110
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 52 SRTNLSLKSYN-NSLPKLAIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGP 110
+R SL+S+ LP+ +I ++T F VL+ + +V+F A W GP
Sbjct: 641 NRDAYSLRSWGLGFLPQASI-----------DLTPQTFNEKVLQGKTHWVVDFYAPWSGP 689
Query: 111 CRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFK 158
+ AP E LA+ ++ K+D A PQ ++ + P++ L++
Sbjct: 690 SQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQ 737
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 77 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH 136
+S +T + FP + + P LV+F A W P R + P + + +L V +D
Sbjct: 439 NSHVTTLGPQNFPAS---DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDC 495
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTL 184
+ L Y + PT ++F N + E EG + ++ E+I+ L
Sbjct: 496 TIHEGLCNMYNIQAYPTTVVF-NQSSIHE--YEGHHSAEQILEFIEDL 540
>pdb|3T58|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
Length = 519
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 91 TVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGD-----RLTVVKIDHDANPQLIEE 145
TVL S VEF A+WCG AP + LA + D L V+ + N + E
Sbjct: 25 TVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCRE 84
Query: 146 YKVYGLPTLILFK------NGQEVPESRREGAITKLKLKEYIDTLLDS 187
+ + G PT+ F+ +G +P + +++L + +++ D+
Sbjct: 85 FNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDT 132
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 83 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGD--RLTVVKIDHDANP 140
+ F V + VL+EF A WCG C+ + P + L ++ + + K+D AN
Sbjct: 32 VVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN- 90
Query: 141 QLIEEYKVYGLPTLILFKNGQEVPESRREGA 171
+ Y+V G PT+ +++ + EG
Sbjct: 91 DVPSPYEVRGFPTIYFSPANKKLNPKKYEGG 121
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 81 TEIT--ESEFPNTVLKSERPVLVEFVANWCGPCRLVAP----AVEWLAQEYGDRLTVV-- 132
+EIT ++E + +L + LV F A+WC + + P A + + +E+ + VV
Sbjct: 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFA 64
Query: 133 KIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYI 181
++D D + + + Y++ PTL LF+NG R G + L +YI
Sbjct: 65 RVDCDQHSDIAQRYRISKYPTLKLFRNGXXXKREYR-GQRSVKALADYI 112
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 75 GASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTV--V 132
G+S + IT+ + + E ++EF A WC C+ + P E A E+G+ L V
Sbjct: 4 GSSGNVRVITDENWRELL---EGDWMIEFYAPWCPACQNLQPEWESFA-EWGEDLEVNIA 59
Query: 133 KIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLD 186
K+D P L + + LPT+ K+G+ R +G TK K++I+ + D
Sbjct: 60 KVDVTEQPGLSGRFIINALPTIYHCKDGE---FRRYQGPRTK---KDFINFISD 107
>pdb|2DJ0|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Related Transmembrane Protein 2
Length = 137
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 100 LVEFVANWCGPCRLVAPAVEWLAQEYG-DRLTVVKIDHDANPQLIEEYKVYG------LP 152
+VEF ANW C+ AP L+ +Y L K+D + YKV LP
Sbjct: 30 IVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLP 89
Query: 153 TLILFKNGQEV---PESRREGAITKLKLKE 179
TLILF+ G+E P+ ++G E
Sbjct: 90 TLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 77 SSGITEITESEFPNTVLKSE---RPVLVEFVANWCGPCRLVAPAV--EWLAQEYGDRLTV 131
+ GI E FP + ++E + + V+ WCGPC+ ++ V + L +Y +R V
Sbjct: 6 ADGIA-FRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFV 64
Query: 132 -VKIDHDANP--QLIEEYKVYGLPTLILFKNGQEV 163
+K+D + +L ++Y V+ PTL+ + EV
Sbjct: 65 NLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEV 99
>pdb|3GNJ|A Chain A, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|B Chain B, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|C Chain C, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|D Chain D, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
Length = 111
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 88 FPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYK 147
F + + LV F C C+ V P +E L Y + +D + L + +
Sbjct: 14 FEQLIYDEGKACLVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFS 73
Query: 148 VYGLPTLILFKNGQ 161
+ G+P ++ FK+G+
Sbjct: 74 LKGVPQILYFKDGE 87
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 68 LAIRVRCGASSGITEITESEFPNTVLKSERP--VLVEFVANWCGPCRLVAPAVE---WLA 122
L VR G + IT ++ L S R V+++F A+WCG CR P +E WL
Sbjct: 3 LGYIVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLK 62
Query: 123 QEYGDRLTVVKIDHD 137
+ ++ ID D
Sbjct: 63 HKDNADFALIGIDRD 77
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 90 NTVLKSER--PVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYK 147
N V S + ++++F A WC PC + + Y +T+V ID D +P+L +++
Sbjct: 32 NQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHN 89
Query: 148 VYGLPTLILFKN 159
+ LPT + N
Sbjct: 90 IKALPTFEFYFN 101
>pdb|3Q6O|A Chain A, Oxidoreductase Fragment Of Human Qsox1
Length = 244
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 90 NTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQE---YGDRLTVVKID--HDANPQLIE 144
VL S VEF A+WCG C AP LA++ + L + +D + N +
Sbjct: 24 GAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCR 83
Query: 145 EYKVYGLPTLILF 157
++ + G PT+ F
Sbjct: 84 DFNIPGFPTVRFF 96
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Reduced Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Photoreduced
Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 97 RPVLVEFVANWCGPCR------LVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYG 150
+PV+++ A+WC C+ P V+ + V + + L++ V G
Sbjct: 32 KPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLG 91
Query: 151 LPTLILFK-NGQEVPESRREG 170
LPT++ F GQE P++R G
Sbjct: 92 LPTILFFDGQGQEHPQARVTG 112
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 97 RPVLVEFVANWCGPCR------LVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYG 150
+PV+++ A+WC C+ P V+ + V + + L++ V G
Sbjct: 29 KPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLG 88
Query: 151 LPTLILFK-NGQEVPESRREG 170
LPT++ F GQE P++R G
Sbjct: 89 LPTILFFDGQGQEHPQARVTG 109
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 80 ITEITESE---FPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQE-YGDRLTVVKID 135
+ EI + E + T ++ +++ F +W PC+ + E ++ E ++ + ID
Sbjct: 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSID 61
Query: 136 HDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLD 186
D N ++ E +++ +P I+ G + E ++ KEY+ L D
Sbjct: 62 ADENSEISELFEISAVPYFIIIHKGTILKE------LSGADPKEYVSLLED 106
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEY-GDRLTVVKIDHDANPQLIE 144
+ ++ A WCGPCR PA++ L ++Y G + V + D N + E
Sbjct: 33 IYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWE 79
>pdb|2L6C|A Chain A, Solution Structure Of Desulfothioredoxin From
Desulfovibrio Vulgaris Hildenborough In Its Oxidized
Form
pdb|2L6D|A Chain A, Solution Structure Of Desulfothioredoxin From
Desulfovibrio Vulgaris Hildenborough In Its Reduced Form
Length = 110
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 100 LVEFVANWCGPCRLVAPAVEWLAQEYGDR---LTVVKIDHDANPQLIEEYKVYGLPTLIL 156
+V F N C C+ +E + ++G R + + +D +A P+L++E +PTL+
Sbjct: 23 IVFFHKNLCPHCK----NMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVF 78
Query: 157 FKNGQ 161
++G+
Sbjct: 79 IRDGK 83
>pdb|3H79|A Chain A, Crystal Structure Of Trypanosoma Cruzi Thioredoxin-like
Hypothetical Protein Q4dv70
Length = 127
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEW----LAQ-EYGDRLTVV 132
S + E+T+ F + V+ E+ V V + W VA W ++Q + + LT V
Sbjct: 15 SRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHS--VAAMRLWDDLSMSQSQKRNHLTFV 72
Query: 133 --KIDHDANPQLIEEYKVYGLPTLILF 157
+ID + P +IE +V G PT+ +
Sbjct: 73 AARIDGEKYPDVIERMRVSGFPTMRYY 99
>pdb|1FO5|A Chain A, Solution Structure Of Reduced Mj0307
Length = 85
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 103 FVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQE 162
F + C C VE +A E D + V I+ NPQ EY + +PT+++ + +
Sbjct: 9 FTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVINGDVEF 68
Query: 163 VPESRREGAITKLK 176
+ +E + +K
Sbjct: 69 IGAPTKEALVEAIK 82
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 89 PNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKV 148
P R +V+F CGPC +APA ++ +Y + +++D +
Sbjct: 14 PELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQGTAATNNI 72
Query: 149 YGLPTLILFKNGQEVPESRREGAIT-KLKLKEYID 182
PT F+N + + + A+ + K+K++++
Sbjct: 73 SATPTFQFFRNKVRIDQYQGADAVGLEEKIKQHLE 107
>pdb|1VRS|D Chain D, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|E Chain E, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|F Chain F, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
Length = 134
Score = 33.1 bits (74), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 97 RPVLVEFVANWCGPCR------LVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYG 150
+PV+++ A+WC + P V+ + V + + L++ V G
Sbjct: 32 KPVMLDLYADWCVASKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLG 91
Query: 151 LPTLILFK-NGQEVPESRREG 170
LPT++ F GQE P++R G
Sbjct: 92 LPTILFFDGQGQEHPQARVTG 112
>pdb|2AYT|A Chain A, The Crystal Structure Of A Protein Disulfide
Oxidoreductase From Aquifex Aeolicus
pdb|2AYT|B Chain B, The Crystal Structure Of A Protein Disulfide
Oxidoreductase From Aquifex Aeolicus
Length = 237
Score = 33.1 bits (74), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 103 FVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQE 162
FV CG C A + W D +T ID N L E+++V G+P +++ K E
Sbjct: 143 FVTTSCGYCP-SAAVMAWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVINKGVAE 201
Query: 163 VPESRREGA 171
++ E A
Sbjct: 202 FVGAQPENA 210
>pdb|4EUY|A Chain A, Crystal Structure Of Thioredoxin-Like Protein Bce_0499
From Bacillus Cereus Atcc 10987
Length = 105
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 91 TVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYG 150
T ++ ++ VL+ CG C + V ++ + Y + + ++I ++ Y V+
Sbjct: 13 TYIEEQQLVLLFIKTENCGVCDVXLRKVNYVLENY-NYVEKIEILLQDXQEIAGRYAVFT 71
Query: 151 LPTLILFKNGQEVPESRR 168
PT++LF NG+E+ R
Sbjct: 72 GPTVLLFYNGKEILRESR 89
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 97 RPVLVEFVANWCGPCRLVAPAVEWLAQEY--GDRLTVVKIDHDANPQLIEEYKVYG-LPT 153
+ V + F A+WC PCR P + +++ VV I D N +Y YG +P
Sbjct: 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY--YGKMPW 86
Query: 154 LIL 156
L L
Sbjct: 87 LAL 89
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDR-LTVVKIDHDA 138
V ++F A+WCGPCR P +Y + VV ++ DA
Sbjct: 31 VYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLDA 71
>pdb|3FK8|A Chain A, The Crystal Structure Of Disulphide Isomerase From Xylella
Fastidiosa Temecula1
Length = 133
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 94 KSERPVLVEFVANWCGPCRLVAPAVEWLAQEY--GDRLTVVKID---HDANPQLIEEYK- 147
++ +P L+ F ANWC CR + ++ VVKID D N +L + Y
Sbjct: 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGD 86
Query: 148 --VYGLPTLILFKNGQEVPESRREGAITKLK 176
G+P +++ + +V + + G + +
Sbjct: 87 PIQDGIPAVVVVNSDGKVRYTTKGGELANAR 117
>pdb|2B5X|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Reduced Form
pdb|2B5Y|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Oxidized Form
Length = 148
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 93 LKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKI-----DHDANPQLIEE 145
L E+P L+ F + C C+ P V +Y D+L VV + + D +P I+E
Sbjct: 26 LIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKE 83
>pdb|3NZP|A Chain A, Crystal Structure Of The Biosynthetic Arginine
Decarboxylase Spea From Campylobacter Jejuni, Northeast
Structural Genomics Consortium Target Br53
pdb|3NZP|B Chain B, Crystal Structure Of The Biosynthetic Arginine
Decarboxylase Spea From Campylobacter Jejuni, Northeast
Structural Genomics Consortium Target Br53
Length = 619
Score = 30.0 bits (66), Expect = 0.73, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 113 LVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEE-YKVY 149
L+AP +E +QEY + ++K NP+LI+E Y +Y
Sbjct: 332 LIAPVLELFSQEYAENKLILK---KQNPKLIDELYDLY 366
>pdb|3RAZ|A Chain A, The Crystal Structure Of Thioredoxin-Related Protein From
Neisseria Meningitidis Serogroup B
Length = 151
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 89 PNTVLKSERPV-LVEFVANWCGPCRLVAPAV-EWLAQEYGDRLTVVKIDHDANPQL 142
P ++ + PV +V A WCGPCR PA +W + + V I D + +
Sbjct: 16 PQSLQSLKAPVRIVNLWATWCGPCRKEXPAXSKWYKAQKKGSVDXVGIALDTSDNI 71
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 48 LLFGSRTNLSLKSYNNSLPKLAIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANW 107
L G L++ S LP LA G + S+F L LV A W
Sbjct: 23 LAHGEVAALTMASAPLKLPDLAFEDADGKPKKL-----SDFRGKTL------LVNLWATW 71
Query: 108 CGPCRLVAPAVEWLAQEY-GDRLTVVKIDHD 137
C PCR PA++ L + G VV I+ D
Sbjct: 72 CVPCRKEMPALDELQGKLSGPNFEVVAINID 102
>pdb|3IA1|A Chain A, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
pdb|3IA1|B Chain B, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
Length = 154
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 89 PNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEY 146
P T +P ++ F A+WC C+ P + +A+E G V+ + +++ EY
Sbjct: 23 PVTPATVSKPAVIVFWASWCTVCKAEFPGLHRVAEETGVPFYVISREPRDTREVVLEY 80
>pdb|1NHO|A Chain A, Structural And Functional Characterization Of A
Thioredoxin-Like Protein From Methanobacterium
Thermoautotrophicum
Length = 85
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 103 FVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLIL 156
F + C C + V+ +E+GD++ V KID + + EY + +P + +
Sbjct: 8 FTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI 61
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange Protein,
Thioredoxin Family Protein From Chlorobium Tepidum Tls
Length = 165
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 78 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDR-LTVVKIDH 136
SG+T + F + LK + +V F A WC PCR P + + + R T V I
Sbjct: 18 SGVT-VDGKPFSSASLKG-KAYIVNFFATWCPPCRSEIPDXVQVQKTWASRGFTFVGI-- 73
Query: 137 DANPQLIEEYKVYGLPTLILFKNGQEVPESRR------EGAITKLKLKEYID 182
N QL K Y I++ PE R +G IT + ID
Sbjct: 74 AVNEQL-PNVKNYXKTQGIIYPVXXATPELIRAFNGYIDGGITGIPTSFVID 124
>pdb|2LUS|A Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda Thioredoxin
Related Protein 16 And Its Role In Regulating
Transcription Factor Nf-Kb Activity
Length = 143
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 30/120 (25%)
Query: 90 NTVLKSERPVLVEFVANWCGPCRLVAPAV-----------------------------EW 120
N LK + + F A+WC PCR P + ++
Sbjct: 20 NEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQY 79
Query: 121 LAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEY 180
+ + +GD L + A+ + +Y + G+P L++ K + G + L + +
Sbjct: 80 MMESHGDWLAIPYRSGPAS-NVTAKYGITGIPALVIVKKDGTLISMNGRGEVQSLGPRAF 138
>pdb|2H30|A Chain A, Crystal Structure Of The N-Terminal Domain Of Pilb From
Neisseria Gonorrhoeae
Length = 164
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 81 TEITESEFPNTV-LKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
T T P +V LK ++P L++F A+WC C E AQ+ + + + A+
Sbjct: 22 TXKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDA--KFSSANLITVAS 79
Query: 140 PQLIEEYK 147
P + E K
Sbjct: 80 PGFLHEKK 87
>pdb|2DVJ|A Chain A, Phosphorylated Crk-Ii
Length = 230
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 128 RLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRR-EGAITKLKLKEYIDTLLD 186
RL + + D+ P L+E YK++ L T L + V SR+ G I + + EY+ L D
Sbjct: 88 RLRIGDQEFDSLPALLEFYKIHYLDTTTLI---EPVSRSRQGSGVILRQEEAEYVRALFD 144
>pdb|2EYY|A Chain A, Ct10-Regulated Kinase Isoform I
Length = 204
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 128 RLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRR-EGAITKLKLKEYIDTLLD 186
RL + + D+ P L+E YK++ L T L + V SR+ G I + + EY+ L D
Sbjct: 86 RLRIGDQEFDSLPALLEFYKIHYLDTTTLI---EPVSRSRQGSGVILRQEEAEYVRALFD 142
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWL-AQEYGD--RLTVVKIDHDANPQLIEEYKVYG--LPT 153
V+V F A WC PCR P+ L A G R V ID + E ++ G LP
Sbjct: 31 VIVNFWATWCPPCREEIPSXXRLNAAXAGKPFRXLCVSIDEGGKVAVEEFFRKTGFTLPV 90
Query: 154 LI 155
L+
Sbjct: 91 LL 92
>pdb|2JZR|A Chain A, Solution Structure Of The Oxidized Form (Cys67-Cys70) Of
The N-Terminal Domain Of Pilb From N. Meningitidis.
pdb|2JZS|A Chain A, Solution Structure Of The Reduced Form Of The N-Terminal
Domain Of Pilb From N. Meningitidis.
pdb|2K9F|A Chain A, Structural Features Of The Complex Between The Dsbd N-
Terminal And The Pilb N-Terminal Domains From Neisseria
Meningitidis
Length = 144
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 93 LKSERPVLVEFVANWCGPC 111
LK ++P L++F A+WC C
Sbjct: 21 LKKDKPTLIKFWASWCPLC 39
>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii
Length = 304
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 128 RLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRR-EGAITKLKLKEYIDTLLD 186
RL + + D+ P L+E YK++ L T L + V SR+ G I + + EY+ L D
Sbjct: 86 RLRIGDQEFDSLPALLEFYKIHYLDTTTLI---EPVSRSRQGSGVILRQEEAEYVRALFD 142
>pdb|2FY6|A Chain A, Structure Of The N-Terminal Domain Of Neisseria
Meningitidis Pilb
Length = 143
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 93 LKSERPVLVEFVANWCGPC 111
LK ++P L++F A+WC C
Sbjct: 20 LKKDKPTLIKFWASWCPLC 38
>pdb|1KNG|A Chain A, Crystal Structure Of Ccmg Reducing Oxidoreductase At 1.14
A
Length = 156
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 26/85 (30%)
Query: 100 LVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDH----------------------- 136
LV A+WC PC AP + L ++ R +V I++
Sbjct: 46 LVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGV 103
Query: 137 DANPQLIEEYKVYGLP-TLILFKNG 160
DAN + E+ VYG+P T ++ + G
Sbjct: 104 DANGRASIEWGVYGVPETFVVGREG 128
>pdb|3PFO|A Chain A, Crystal Structure Of A Putative Acetylornithine
Deacetylase (Rpa2325) From Rhodopseudomonas Palustris
Cga009 At 1.90 A Resolution
pdb|3PFO|B Chain B, Crystal Structure Of A Putative Acetylornithine
Deacetylase (Rpa2325) From Rhodopseudomonas Palustris
Cga009 At 1.90 A Resolution
Length = 433
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 115 APAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITK 174
AP EWLAQ++ DR V A+ + K T+ + Q V + +G
Sbjct: 46 APQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPXDTIDPAGSXQVVATADSDGKGRS 105
Query: 175 LKLKEYIDTL 184
L L+ +ID +
Sbjct: 106 LILQGHIDVV 115
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 27/110 (24%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDR----LTVVKIDHDANPQLIE---------- 144
++ F +WC PC+ P + + +TV ++ + N Q++E
Sbjct: 37 TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTF 96
Query: 145 ------------EYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 182
EY + +PT L E+ E + G T +LKE+ +
Sbjct: 97 PIVLDSKGELXKEYHIITIPTSFLLNEKGEI-EKTKIGPXTAEQLKEWTE 145
>pdb|2DBC|A Chain A, Solution Structure Of The Thioredoxin-Like Domain Of
Phosducin-Like Protein 2(Pdcl2)
Length = 135
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 80 ITEITESEFPNTVLKSERP--VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHD 137
+ EI+ +++ N V +E+ V++ + C +V + LA+++ + V I +
Sbjct: 12 LREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNS 71
Query: 138 ANPQLIEEYKVYGLPTLILFKNGQ 161
IE Y LPT+ ++KNGQ
Sbjct: 72 C----IEHYHDNCLPTIFVYKNGQ 91
>pdb|3EVI|A Chain A, Crystal Structure Of The Thioredoxin-Fold Domain Of Human
Phosducin- Like Protein 2
pdb|3EVI|B Chain B, Crystal Structure Of The Thioredoxin-Fold Domain Of Human
Phosducin- Like Protein 2
Length = 118
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 82 EITESEFPNTVLKSERPV--LVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDAN 139
EI+ +++ N V +E V ++ + C LV + LA+++ + V I +
Sbjct: 7 EISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC- 65
Query: 140 PQLIEEYKVYGLPTLILFKNGQ 161
I+ Y LPT+ ++KNGQ
Sbjct: 66 ---IQHYHDNCLPTIFVYKNGQ 84
>pdb|2IN3|A Chain A, Crystal Structure Of A Putative Protein Disulfide
Isomerase From Nitrosomonas Europaea
Length = 216
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 96 ERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTV 131
E+PVL C C AP +E + QEY LTV
Sbjct: 6 EKPVLWYIADPXCSWCWGFAPVIENIRQEYSAFLTV 41
>pdb|3HA9|A Chain A, The 1.7a Crystal Structure Of A Thioredoxin-like Protein
From Aeropyrum Pernix
Length = 165
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 99 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKID 135
V++ F+A WC C +A ++ L ++Y + ++V+ ID
Sbjct: 40 VILWFMAAWCPSCVYMADLLDRLTEKYRE-ISVIAID 75
>pdb|1R5P|A Chain A, Crystal Structure Analysis Of Kaib From Pcc7120
pdb|1R5P|B Chain B, Crystal Structure Analysis Of Kaib From Pcc7120
Length = 108
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 121 LAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTL 154
L QE+ + ID NPQL EE K+ PTL
Sbjct: 32 LEQEFQGIYALKVIDVLKNPQLAEEDKILATPTL 65
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,024,579
Number of Sequences: 62578
Number of extensions: 185728
Number of successful extensions: 729
Number of sequences better than 100.0: 185
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 475
Number of HSP's gapped (non-prelim): 189
length of query: 191
length of database: 14,973,337
effective HSP length: 93
effective length of query: 98
effective length of database: 9,153,583
effective search space: 897051134
effective search space used: 897051134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)