BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029576
         (191 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P11001|GTF1_STRDO Glucosyltransferase-I OS=Streptococcus downei GN=gtfI PE=3 SV=1
          Length = 1597

 Score = 33.1 bits (74), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 27/65 (41%)

Query: 124 DSAFCSLECRQQQMNQDERKQKCTSHGHASASASASAAKKQAAAAASSTAARSQVSSKGE 183
           DS    L   Q   NQD  +    +   +  SAS  AA  QA+A   ++AA     +   
Sbjct: 46  DSNQAVLTADQTTTNQDTEQTSVAATATSEQSASTDAATDQASATDQASAAEQTQGTTAS 105

Query: 184 RDTVA 188
            DT A
Sbjct: 106 TDTAA 110


>sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1
          Length = 1333

 Score = 33.1 bits (74), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 15/109 (13%)

Query: 7    PRP-PMKRTTSLSE----ISFDLDGGGDDSSSAAASHQQKNPTAALTKHPGSGGGGVDDV 61
            PRP  M+  T L +    IS+      +  S+A+A +  + P   LT  P SG     DV
Sbjct: 1045 PRPGTMRHPTPLQQEPRKISYSRIPESETESTASAPNSPRTP---LTPPPASGASSTTDV 1101

Query: 62   DQRFLSTVSSPRNNNNNNNRHSADFLET--PHFLRTCGLCKRRLVPGRD 108
               F S  SSP +++N+       F++   PH  R+  +    L  G D
Sbjct: 1102 CSVFDSDHSSPFHSSNDTV-----FIQVTLPHGPRSASVSSISLTKGTD 1145


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.126    0.368 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,586,165
Number of Sequences: 539616
Number of extensions: 2772682
Number of successful extensions: 45462
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 43001
Number of HSP's gapped (non-prelim): 2371
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)