BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029578
(191 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EBB|A Chain A, Bacillus Stearothermophilus Yhfr
Length = 202
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 86 LVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAE 145
L RHG + WN E R+QG + S LTE G + A R K L + ++S RA TAE
Sbjct: 6 LTRHGETKWNVERRMQGWQD-SPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAE 64
Query: 146 ILWQGRDEPLAFIDSLKEAHLFFLEG 171
I+ GR P+ + L+E HL EG
Sbjct: 65 IVRGGRLIPIYQDERLREIHLGDWEG 90
>pdb|1H2E|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Phosphate
pdb|1H2F|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Trivanadate
Length = 207
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 86 LVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAE 145
L RHG + WN E R+QG + S LTE G + A R K L + ++S RA TAE
Sbjct: 6 LTRHGETKWNVERRMQGWQD-SPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAE 64
Query: 146 ILWQGRDEPLAFIDSLKEAHLFFLEG 171
I+ GR P+ + L+E HL EG
Sbjct: 65 IVRGGRLIPIYQDERLREIHLGDWEG 90
>pdb|2P9Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLHP-----ELREIHFGALEG 82
>pdb|2P6O|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P6O|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETMWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2OWE|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRMYP-----ELREIHFGALEG 82
>pdb|2EKB|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
pdb|2EKB|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
Length = 177
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRMLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2OWD|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2OWD|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLMRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P9Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9Y|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P79|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P79|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P30|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P2Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P2Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2ENU|A Chain A, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
pdb|2ENU|B Chain B, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|1V37|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Thermus
Thermophilus Hb8
pdb|1V37|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From Thermus
Thermophilus Hb8
pdb|1V7Q|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Thermus
Thermophilus Hb8
pdb|2HIA|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P77|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P77|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAEMAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2EOA|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
pdb|2EOA|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2EKZ|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
pdb|2EKZ|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDMLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P9F|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9F|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEI 146
TAE+
Sbjct: 58 TAEL 61
>pdb|2P78|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P78|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEI 146
TAE+
Sbjct: 58 TAEL 61
>pdb|2ENW|A Chain A, Mutant Y92h Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2ENW|B Chain B, Mutant Y92h Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2PA0|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2PA0|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L + E G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLPMTAE-GEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P75|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P75|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G ++L LT G QA R + A+ ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGAMPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P6M|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P6M|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ LVRHG + WN EGR+ G +++ LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDMP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|2P2Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKS 142
++ +VRHG + WN EGR+ G ++L LT G QA R + AL ++ FSS + RA+
Sbjct: 2 ELWMVRHGETLWNREGRLLGWTDLP-LTAEGEAQARRLKGALPSL---PAFSSDLLRARR 57
Query: 143 TAEIL-WQGRDEPLAFIDSLKEAHLFFLEG 171
TAE+ + R P L+E H LEG
Sbjct: 58 TAELAGFSPRLYP-----ELREIHFGALEG 82
>pdb|3LNT|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
pdb|3LNT|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
Length = 250
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ L+RHG S+WN E R G ++ LTE G R+A + + L+ FD ++S + RA
Sbjct: 4 KLVLIRHGESTWNKENRFTGWVDVD-LTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 62
Query: 141 KSTAEILWQGRDE------PLAFIDSLKEAHLFFLEGM 172
T LW +D+ P+ L E H L G+
Sbjct: 63 IRT---LWHVQDQMDLMYVPVVHSWRLNERHYGALSGL 97
>pdb|3EZN|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3EZN|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3FDZ|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
pdb|3GP3|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|C Chain C, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|D Chain D, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP5|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GP5|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GW8|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
pdb|3GW8|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
Length = 257
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ L+RHG S+WN E R G ++ LTE G R+A + + L+ FD ++S + RA
Sbjct: 11 KLVLIRHGESTWNKENRFTGWVDVD-LTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 69
Query: 141 KSTAEILWQGRDE------PLAFIDSLKEAHLFFLEGM 172
T LW +D+ P+ L E H L G+
Sbjct: 70 IRT---LWHVQDQMDLMYVPVVHSWRLNERHYGALSGL 104
>pdb|1E59|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Complexed With Vanadate
Length = 249
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ LVRHG S WN E R G ++ L+E GV +A+ K L+ FD ++S + RA
Sbjct: 4 KLVLVRHGESQWNKENRFTGWYDVD-LSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRA 62
Query: 141 KSTAEILWQGRDE------PLAFIDSLKEAHLFFLEGM 172
T LW DE P+ L E H L+G+
Sbjct: 63 IHT---LWNVLDELDQAWLPVEKSWKLNERHYGALQGL 97
>pdb|3E9C|A Chain A, Structure Of A Tryptic Core Fragment Of Tigar From Danio
Rerio
pdb|3E9C|B Chain B, Structure Of A Tryptic Core Fragment Of Tigar From Danio
Rerio
pdb|3E9D|A Chain A, Structure Of Full-Length Tigar From Danio Rerio
pdb|3E9D|B Chain B, Structure Of Full-Length Tigar From Danio Rerio
Length = 265
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKST 143
+T+VRHG + +N + +QG + L++ G +QA + L++++F F S + RA T
Sbjct: 6 LTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKDLHFTNVFVSNLQRAIQT 65
Query: 144 AEILW 148
AEI+
Sbjct: 66 AEIIL 70
>pdb|3DCY|A Chain A, Crystal Structure A Tp53-Induced Glycolysis And Apoptosis
Regulator Protein From Homo Sapiens
Length = 275
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKST 143
+T+VRHG + +N E +QG L+E G +QA L N+ F FSS + R K T
Sbjct: 11 LTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVKFTHAFSSDLXRTKQT 70
Query: 144 AEILWQG----RDEPLAFIDSLKEAHLFFLEG 171
+ + +D + + L+E +EG
Sbjct: 71 XHGILERSKFCKDXTVKYDSRLRERKYGVVEG 102
>pdb|1YFK|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YFK|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|C Chain C, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|D Chain D, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|E Chain E, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|F Chain F, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|G Chain G, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|H Chain H, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|I Chain I, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|J Chain J, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|K Chain K, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|L Chain L, Crystal Structure Of Human B Type Phosphoglycerate Mutase
Length = 262
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ L+RHG S+WN E R G + L+ AG +A+R +ALR+ FD CF+S RA
Sbjct: 5 KLVLIRHGESAWNLENRFSGWYDAD-LSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRA 63
Query: 141 KSTAEILWQGRDE---PLAFIDSLKEAHLFFLEGM 172
T + D+ P+ L E H L G+
Sbjct: 64 IRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGL 98
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL--RNIYFDQCFSSPICRA 140
K+TL+RHG S WN E R G +++S L+E GV +A + L + FD ++S + RA
Sbjct: 22 KLTLIRHGESEWNKENRFTGWTDVS-LSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLKRA 80
Query: 141 KST 143
T
Sbjct: 81 IMT 83
>pdb|3FDZ|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
Length = 257
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ L+R G S+WN E R G ++ LTE G R+A + + L+ FD ++S + RA
Sbjct: 11 KLVLIRXGESTWNKENRFTGWVDVD-LTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 69
Query: 141 KSTAEILWQGRDE------PLAFIDSLKEAHLFFLEGM 172
T LW +D+ P+ L E H L G+
Sbjct: 70 IRT---LWHVQDQMDLMYVPVVHSWRLNERHYGALSGL 104
>pdb|4PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|1BQ3|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ4|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|5PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|F Chain F, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|G Chain G, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|H Chain H, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|E Chain E, Saccharomyces Cerevisiae Phosphoglycerate Mutase
Length = 246
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ LVRHG S WN++ G ++ L+ G ++A R + L+ +Y D ++S + RA
Sbjct: 2 KLVLVRHGQSEWNEKNLFTGWVDVK-LSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRA 60
Query: 141 KSTAEILWQGRDE---PLAFIDSLKEAHLFFLEGMKNGLSLVYF 181
TA I + D P+ L E H L+G +L F
Sbjct: 61 IQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKF 104
>pdb|1QHF|A Chain A, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
pdb|1QHF|B Chain B, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
Length = 240
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ LVRHG S WN++ G ++ L+ G ++A R + L+ +Y D ++S + RA
Sbjct: 2 KLVLVRHGQSEWNEKNLFTGWVDVK-LSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRA 60
Query: 141 KSTAEILWQGRDE---PLAFIDSLKEAHLFFLEGMKNGLSLVYF 181
TA I + D P+ L E H L+G +L F
Sbjct: 61 IQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKF 104
>pdb|1E58|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Length = 249
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ LVR G S WN E R G ++ L+E GV +A+ K L+ FD ++S + RA
Sbjct: 4 KLVLVRXGESQWNKENRFTGWYDVD-LSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRA 62
Query: 141 KSTAEILWQGRDE------PLAFIDSLKEAHLFFLEGM 172
T LW DE P+ L E H L+G+
Sbjct: 63 IHT---LWNVLDELDQAWLPVEKSWKLNERHYGALQGL 97
>pdb|3E9E|A Chain A, Structure Of Full-Length H11a Mutant Form Of Tigar From
Danio Rerio
pdb|3E9E|B Chain B, Structure Of Full-Length H11a Mutant Form Of Tigar From
Danio Rerio
Length = 265
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKST 143
+T+VR G + +N + +QG + L++ G +QA + L++++F F S + RA T
Sbjct: 6 LTIVRAGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKDLHFTNVFVSNLQRAIQT 65
Query: 144 AEILW 148
AEI+
Sbjct: 66 AEIIL 70
>pdb|1FZT|A Chain A, Solution Structure And Dynamics Of An Open B-Sheet,
Glycolytic Enzyme-Monomeric 23.7 Kda Phosphoglycerate
Mutase From Schizosaccharomyces Pombe
Length = 211
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL--RNIYFDQCFSSPIC 138
P + L RHG S WN G + L+E G+++A+ + L R FD F+S +
Sbjct: 7 PNLLVLTRHGESEWNKLNLFTGWKD-PALSETGIKEAKLGGERLKSRGYKFDIAFTSALQ 65
Query: 139 RAKSTAEILWQGRDEP-LAFIDS--LKEAHLFFLEGM 172
RA+ T +I+ + EP L I S L E + L+G+
Sbjct: 66 RAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGL 102
>pdb|1XQ9|A Chain A, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
pdb|1XQ9|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
Length = 258
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL--RNIYFDQCFSSPICRAK 141
+ L+RHG S+WN E + G +++ L+E G +A K L +N FD ++S + RA
Sbjct: 14 LVLLRHGESTWNKENKFTGWTDVP-LSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAI 72
Query: 142 STAEILWQGRD---EPLAFIDSLKEAHLFFLEGM 172
TA + + D P+ L E H L+G+
Sbjct: 73 CTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGL 106
>pdb|3KKK|A Chain A, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|B Chain B, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|C Chain C, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|D Chain D, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
Length = 258
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL--RNIYFDQCFSSPICRAK 141
+ L+RHG S+WN E + G +++ L+E G +A K L +N FD ++S + RA
Sbjct: 14 LVLLRHGESTWNKENKFTGWTDVP-LSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAI 72
Query: 142 STAEILWQGRD---EPLAFIDSLKEAHLFFLEGM 172
TA + + D P+ L E H L+G+
Sbjct: 73 CTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGL 106
>pdb|4EMB|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|B Chain B, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|C Chain C, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|D Chain D, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
Length = 274
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRA 140
K+ LVRHG S WN E G +++ L++ G+ +A L+ FD FSS + RA
Sbjct: 29 KLVLVRHGESEWNKENLFTGWTDVK-LSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRA 87
Query: 141 KSTAEIL 147
T I+
Sbjct: 88 NDTLNII 94
>pdb|1T8P|A Chain A, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|1T8P|B Chain B, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|2A9J|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2A9J|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2F90|A Chain A, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2F90|B Chain B, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2H4X|A Chain A, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4X|B Chain B, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4Z|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H4Z|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H52|A Chain A, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|2H52|B Chain B, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|3NFY|A Chain A, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
pdb|3NFY|B Chain B, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
Length = 267
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRA 140
K+ ++RHG +WN E R + + +E G+ +A C K L+ N FD F+S + R+
Sbjct: 5 KLIMLRHGEGAWNKENRFCSWVDQKLNSE-GMEEARNCGKQLKALNFEFDLVFTSVLNRS 63
Query: 141 KSTAEILWQGRDEPLAFIDS---LKEAHLFFLEGM 172
TA ++ + + ++S L E H L G+
Sbjct: 64 IHTAWLILEELGQEWVPVESSWRLNERHYGALIGL 98
>pdb|3PGM|A Chain A, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
pdb|3PGM|B Chain B, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
Length = 244
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR----NIYFDQCFSSPIC 138
K+ LVRHG S WN++ G ++ L+ G ++A R + L+ N+ D ++S +
Sbjct: 2 KLVLVRHGQSEWNEKNLFTGWVDVK-LSAKGQQEAARAGELLKEKGVNVLVD--YTSKLS 58
Query: 139 RAKSTAEILWQGRDE---PLAFIDSLKEAHLFFLEGMKNGLSLVYF 181
RA TA I + D P+ L E H L+G +L F
Sbjct: 59 RAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKF 104
>pdb|3R7A|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Bacillus
Anthracis Str. Sterne
pdb|3R7A|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From Bacillus
Anthracis Str. Sterne
Length = 237
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 86 LVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAE 145
+ RHG + N R QG ++ S L E GV A L++I+F +SS RA TA
Sbjct: 18 VTRHGKTILNTNHRAQGWAD-SPLVEKGVEVATNLGTGLKDIHFXNAYSSDSGRAIETAN 76
Query: 146 ILWQGRDE---PLAFIDSLKEAHLFFLEGMK 173
++ + ++ L L+E + EG K
Sbjct: 77 LVLKYSEQSKLKLEQRKKLRELNFGIFEGEK 107
>pdb|1K6M|A Chain A, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
pdb|1K6M|B Chain B, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
Length = 432
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 60 TGGAYDFGRATKSLTQKLISY-------PKKVTLVRHGLSSWNDEGRVQGSSNLSV 108
G Y R + + + Y P+ + L RHG S N GR+ G S LSV
Sbjct: 184 VGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSV 239
>pdb|3BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase Empty
6-Pf-2k Active Site
Length = 468
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 60 TGGAYDFGRATKSLTQKLISY-------PKKVTLVRHGLSSWNDEGRVQGSSNLS 107
G +Y R + +++ Y P+ + L RHG S N +GR+ G LS
Sbjct: 220 VGQSYVVNRVADHIQSRIVYYLMNIHVTPRSIYLCRHGESELNLKGRIGGDPGLS 274
>pdb|1BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
Bifunctional Enzyme Complexed With Atp-G-S And Phosphate
Length = 469
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 60 TGGAYDFGRATKSLTQKLISY-------PKKVTLVRHGLSSWNDEGRVQGSSNLS 107
G +Y R + +++ Y P+ + L RHG S N +GR+ G LS
Sbjct: 221 VGQSYVVNRVADHIQSRIVYYLMNIHVTPRSIYLCRHGESELNLKGRIGGDPGLS 275
>pdb|3F2I|A Chain A, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|B Chain B, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|C Chain C, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|D Chain D, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|E Chain E, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|F Chain F, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422
Length = 172
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRA 140
++ L+RHG++ G L T+ G ++ E+ L + FD +SP+ RA
Sbjct: 2 ELYLIRHGIAEAQKTGIKDEEREL---TQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRA 58
Query: 141 KSTAEIL 147
+ TAEIL
Sbjct: 59 RQTAEIL 65
>pdb|2A6P|A Chain A, Structure Solution To 2.2 Angstrom And Functional
Characterisation Of The Open Reading Frame Rv3214 From
Mycobacterium Tuberculosis
pdb|2A6P|B Chain B, Structure Solution To 2.2 Angstrom And Functional
Characterisation Of The Open Reading Frame Rv3214 From
Mycobacterium Tuberculosis
Length = 208
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQ--CFSSPICR 139
++ L+RHG ++W+ GR G + + LT+ G QAE + L + D SP R
Sbjct: 11 HRLLLLRHGETAWSTLGRHTGGTEVE-LTDTGRTQAELAGQLLGELELDDPIVICSPRRR 69
Query: 140 AKSTAEI 146
TA++
Sbjct: 70 TLDTAKL 76
>pdb|4EO9|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpm1 From
Mycobacterium Leprae
Length = 268
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL--RNIYFDQCFSSPICRAK 141
+ L+RHG S WN G ++ LT+ G +A R + L N+ D ++S + RA
Sbjct: 30 LILLRHGESDWNARNLFTGWVDVG-LTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAI 88
Query: 142 STAEILWQGRDE---PLAFIDSLKEAHLFFLEGMKNGLS 177
+TA + D P+ L E H L+G+ ++
Sbjct: 89 TTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVT 127
>pdb|3F3K|A Chain A, The Structure Of Uncharacterized Protein Ykr043c From
Saccharomyces Cerevisiae.
pdb|3F3K|B Chain B, The Structure Of Uncharacterized Protein Ykr043c From
Saccharomyces Cerevisiae
Length = 265
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL-RNIYF------DQCFSS 135
+ +VRHG + W+ G+ G ++L LT G Q R +++ RN F F+S
Sbjct: 7 RCIIVRHGQTEWSKSGQYTGLTDLP-LTPYGEGQXLRTGESVFRNNQFLNPDNITYIFTS 65
Query: 136 PICRAKSTAEIL 147
P RA+ T +++
Sbjct: 66 PRLRARQTVDLV 77
>pdb|3LG2|A Chain A, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|B Chain B, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|C Chain C, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|D Chain D, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
Length = 292
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 75 QKLISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL-RNIYF---- 129
Q S + +VRHG + W+ G+ G ++L LT G Q R +++ RN F
Sbjct: 20 QGXPSLTPRCIIVRHGQTEWSKSGQYTGLTDLP-LTPYGEGQXLRTGESVFRNNQFLNPD 78
Query: 130 --DQCFSSPICRAKSTAEIL 147
F+SP RA+ T +++
Sbjct: 79 NITYIFTSPRLRARQTVDLV 98
>pdb|3HJG|A Chain A, Crystal Structure Of Putative Alpha-Ribazole-5'-Phosphate
Phosphatase Cobc From Vibrio Parahaemolyticus
pdb|3HJG|B Chain B, Crystal Structure Of Putative Alpha-Ribazole-5'-Phosphate
Phosphatase Cobc From Vibrio Parahaemolyticus
Length = 213
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL----RNIYFDQCFSSPIC 138
+ L+RHG +V + L T+ V++AE+ + A+ + SSP+
Sbjct: 7 NIYLMRHG--------KVDAAPGLHGQTDLKVKEAEQQQIAMAWKTKGYDVAGIISSPLS 58
Query: 139 RAKSTAEILWQGRDEPLAFIDSLKEAHLFFLEGM 172
R A+IL + + P+ D L+E +GM
Sbjct: 59 RCHDLAQILAEQQLLPMTTEDDLQEMDFGDFDGM 92
>pdb|2AXN|A Chain A, Crystal Structure Of The Human Inducible Form 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
pdb|2DWO|A Chain A, Pfkfb3 In Complex With Adp And Pep
pdb|2DWP|A Chain A, A Pseudo Substrate Complex Of 6-Phosphofructo-2-Kinase Of
Pfkfb
pdb|2I1V|B Chain B, Crystal Structure Of Pfkfb3 In Complex With Adp And
Fructose-2,6-Bisphosphate
pdb|3QPU|A Chain A, Pfkfb3 In Complex With Ppi
pdb|3QPV|A Chain A, Pfkfb3 Trapped In A Phospho-Enzyme Intermediate State
pdb|3QPW|A Chain A, Pfkfb3 In Complex With Aluminum Tetrafluoride
Length = 520
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 37 IACSNSSPDLPATTEKLQNDASV-----TGGAYDFGRATKSLTQKLISY-------PKKV 84
I+C +S P +K D S+ G + R + +++ Y P+ +
Sbjct: 191 ISCYEASYQ-PLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTI 249
Query: 85 TLVRHGLSSWNDEGRVQGSSNLS 107
L RHG + N +GR+ G S LS
Sbjct: 250 YLCRHGENEHNLQGRIGGDSGLS 272
>pdb|3LL4|A Chain A, Structure Of The H13a Mutant Of Ykr043c In Complex With
Fructose-1,6- Bisphosphate
pdb|3LL4|B Chain B, Structure Of The H13a Mutant Of Ykr043c In Complex With
Fructose-1,6- Bisphosphate
Length = 292
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 75 QKLISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL-RNIYF---- 129
Q + S + +VR G + W+ G+ G ++L LT G Q R +++ RN F
Sbjct: 20 QGMPSLTPRCIIVRAGQTEWSKSGQYTGLTDLP-LTPYGEGQMLRTGESVFRNNQFLNPD 78
Query: 130 --DQCFSSPICRAKSTAEILWQG-RDEPLAFI-----DSLKEAHLFFLEGM 172
F+SP RA+ T +++ + DE A I D L+E EGM
Sbjct: 79 NITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGM 129
>pdb|1RII|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|C Chain C, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|D Chain D, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
Length = 265
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRK----ALRNIYFDQCFSSPICR 139
+ L+RHG S WN G ++ LT+ G QAE R A ++ D ++S + R
Sbjct: 7 LVLLRHGESDWNALNLFTGWVDVG-LTDKG--QAEAVRSGELIAEHDLLPDVLYTSLLRR 63
Query: 140 AKSTAEILWQGRDE---PLAFIDSLKEAHLFFLEGM 172
A +TA + D P+ L E H L+G+
Sbjct: 64 AITTAHLALDSADRLWIPVRRSWRLNERHYGALQGL 99
>pdb|4EIB|A Chain A, Crystal Structure Of Circular Permuted Cbm21 (Cp90) Gives
Insight Into The Altered Selectivity On Carbohydrate
Binding.
pdb|4EIB|B Chain B, Crystal Structure Of Circular Permuted Cbm21 (Cp90) Gives
Insight Into The Altered Selectivity On Carbohydrate
Binding
Length = 109
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 40 SNSSPDLPATTE--KLQNDASVTGGAYDFGRATKS--LTQKLISYPKKVTLVR-HGLSSW 94
+N+S + +T + + ASV +Y++ +T S + K I+Y KKVT+V G +W
Sbjct: 8 NNNSANYQVSTHMASIPSSASVQLDSYNYDGSTFSGKIYVKNIAYSKKVTVVYADGSDNW 67
Query: 95 NDEGRVQGSS 104
N+ G + +S
Sbjct: 68 NNNGNIIAAS 77
>pdb|2RFL|A Chain A, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|B Chain B, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|C Chain C, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|D Chain D, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|E Chain E, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|F Chain F, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|G Chain G, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
pdb|2RFL|H Chain H, Crystal Structure Of The Putative Phosphohistidine
Phosphatase Sixa From Agrobacterium Tumefaciens
Length = 173
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRK--ALRNIYFDQCFSSP 136
S+P +V L+RH ++W G L+ EAG +AE A R D SS
Sbjct: 6 SFPTRVYLLRHAKAAWAAPGERDFDRGLN---EAGFAEAEIIADLAADRRYRPDLILSST 62
Query: 137 ICRAKSTAEILWQGRDEPLAFIDSLKEAHLFFLEGMKNGLSLVYFYLL 184
R + T + WQ AF + + + +++ N S Y L+
Sbjct: 63 AARCRQTTQA-WQ-----RAFNEGID---IVYIDEXYNARSETYLSLI 101
>pdb|3I5V|A Chain A, Crystal Structure Of Beta Toxin 275-280 From
Staphylococcus Aureus
pdb|3I5V|B Chain B, Crystal Structure Of Beta Toxin 275-280 From
Staphylococcus Aureus
pdb|3I5V|C Chain C, Crystal Structure Of Beta Toxin 275-280 From
Staphylococcus Aureus
pdb|3I5V|D Chain D, Crystal Structure Of Beta Toxin 275-280 From
Staphylococcus Aureus
Length = 313
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 10 IPLWSHLTSKFDSKRERAFKHQPTTLGIACSNS-----SPDLPATTEKLQN-DASVTGGA 63
+P SH+ SK D + H L + DL + ++N D + A
Sbjct: 15 VPRGSHMESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEA 74
Query: 64 YDFGRATKSLTQKLISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGV 114
+D G + K L+ YP + ++ S W+ + +GS + +V + GV
Sbjct: 75 FDNGASDKLLSNVKKEYPYQTPVLGRSQSGWD---KTEGSYSSTVAEDGGV 122
>pdb|3K55|A Chain A, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|B Chain B, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|C Chain C, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|D Chain D, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|E Chain E, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|F Chain F, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|G Chain G, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|H Chain H, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|I Chain I, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|J Chain J, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|K Chain K, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|L Chain L, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|M Chain M, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|N Chain N, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|O Chain O, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
pdb|3K55|P Chain P, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
From Staphylococcus Aureus
Length = 306
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 10 IPLWSHLTSKFDSKRERAFKHQPTTLGIACSNS-----SPDLPATTEKLQN-DASVTGGA 63
+P SH+ SK D + H L + DL + ++N D + A
Sbjct: 15 VPRGSHMESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEA 74
Query: 64 YDFGRATKSLTQKLISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGV 114
+D G + K L+ YP + ++ S W+ + +GS + +V + GV
Sbjct: 75 FDNGASDKLLSNVKKEYPYQTPVLGRSQSGWD---KTEGSYSSTVAEDGGV 122
>pdb|3I41|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
F277a, P278a Mutant
pdb|3I41|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
F277a, P278a Mutant
pdb|3I46|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
F277a, P278a Mutant With Bound Calcium Ions
pdb|3I46|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
F277a, P278a Mutant With Bound Calcium Ions
pdb|3I48|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
F277a, P278a Mutant With Bound Magnesium Ions
pdb|3I48|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
F277a, P278a Mutant With Bound Magnesium Ions
Length = 317
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 10 IPLWSHLTSKFDSKRERAFKHQPTTLGIACSNS-----SPDLPATTEKLQN-DASVTGGA 63
+P SH+ SK D + H L + DL + ++N D + A
Sbjct: 15 VPRGSHMESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEA 74
Query: 64 YDFGRATKSLTQKLISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGV 114
+D G + K L+ YP + ++ S W+ + +GS + +V + GV
Sbjct: 75 FDNGASDKLLSNVKKEYPYQTPVLGRSQSGWD---KTEGSYSSTVAEDGGV 122
>pdb|2DJM|A Chain A, Solution Structure Of N-Terminal Starch-Binding Domain Of
Glucoamylase From Rhizopus Oryzae
pdb|2V8L|A Chain A, Carbohydrate-Binding Of The Starch Binding Domain Of
Rhizopus Oryzae Glucoamylase In Complex With Beta-
Cyclodextrin And Maltoheptaose
pdb|2V8M|A Chain A, Carbohydrate-Binding Of The Starch Binding Domain Of
Rhizopus Oryzae Glucoamylase In Complex With Beta-
Cyclodextrin And Maltoheptaose
pdb|2V8M|B Chain B, Carbohydrate-Binding Of The Starch Binding Domain Of
Rhizopus Oryzae Glucoamylase In Complex With Beta-
Cyclodextrin And Maltoheptaose
pdb|2V8M|C Chain C, Carbohydrate-Binding Of The Starch Binding Domain Of
Rhizopus Oryzae Glucoamylase In Complex With Beta-
Cyclodextrin And Maltoheptaose
pdb|2V8M|D Chain D, Carbohydrate-Binding Of The Starch Binding Domain Of
Rhizopus Oryzae Glucoamylase In Complex With Beta-
Cyclodextrin And Maltoheptaose
pdb|2VQ4|A Chain A, Carbohydrate-Binding Of The Starch Binding Domain Of
Rhizopus Oryzae Glucoamylase In Complex With Beta-
Cyclodextrin And Maltoheptaose
Length = 106
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 57 ASVTGGAYDFGRATKS--LTQKLISYPKKVTLVR-HGLSSWNDEGRVQGSS 104
ASV +Y++ +T S + K I+Y KKVT+V G +WN+ G + +S
Sbjct: 7 ASVQLDSYNYDGSTFSGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAAS 57
>pdb|3AJV|A Chain A, Splicing Endonuclease From Aeropyrum Pernix
pdb|3AJV|C Chain C, Splicing Endonuclease From Aeropyrum Pernix
Length = 190
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 121 RKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPL 155
R + ++ ++CF CR L +GR EPL
Sbjct: 36 RLGVEGVFVEECFDGSYCRNLERIGYLRKGRLEPL 70
>pdb|3P1Z|A Chain A, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
pdb|3P1Z|C Chain C, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
pdb|3P1Z|E Chain E, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
pdb|3P1Z|G Chain G, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
pdb|3P1Z|I Chain I, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
pdb|3P1Z|K Chain K, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
Length = 170
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 121 RKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPL 155
R + ++ ++CF CR L +GR EPL
Sbjct: 16 RLGVEGVFVEECFDGSYCRNLERIGYLRKGRLEPL 50
>pdb|3OI7|A Chain A, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
pdb|3OI7|B Chain B, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
pdb|3OI7|C Chain C, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
pdb|3OI7|D Chain D, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
Length = 292
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 75 QKLISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKAL-RNIYF---- 129
Q S + +VR G + W+ G+ G ++L LT G Q R +++ RN F
Sbjct: 20 QGXPSLTPRCIIVRAGQTEWSKSGQYTGLTDLP-LTPYGEGQXLRTGESVFRNNQFLNPD 78
Query: 130 --DQCFSSPICRAKSTAEIL 147
F+SP RA+ T +++
Sbjct: 79 NITYIFTSPRLRARQTVDLV 98
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,429,041
Number of Sequences: 62578
Number of extensions: 198138
Number of successful extensions: 380
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 336
Number of HSP's gapped (non-prelim): 66
length of query: 191
length of database: 14,973,337
effective HSP length: 93
effective length of query: 98
effective length of database: 9,153,583
effective search space: 897051134
effective search space used: 897051134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)