Query 029582
Match_columns 191
No_of_seqs 171 out of 730
Neff 4.5
Searched_HMMs 29240
Date Tue Mar 26 01:13:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029582.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029582hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jon_A Beta-1,3-glucanase; oli 100.0 5.9E-35 2E-39 222.8 10.1 88 16-103 8-99 (101)
2 2w61_A GAS2P, glycolipid-ancho 99.9 1.3E-26 4.5E-31 218.1 1.9 89 19-108 396-500 (555)
3 2gsv_A Hypothetical protein YV 17.0 51 0.0018 23.4 1.3 9 68-76 28-36 (80)
4 1efe_A Mini-proinsulin, M2PI; 15.9 1.7E+02 0.0057 19.5 3.7 39 30-68 8-58 (60)
5 2knc_B Integrin beta-3; transm 12.4 1.7E+02 0.0057 20.5 3.0 16 175-190 17-32 (79)
6 1b9g_A Protein (growth factor 11.0 1.3E+02 0.0043 20.1 1.9 36 31-68 8-47 (57)
7 2jp3_A FXYD domain-containing 9.6 3.1E+02 0.011 19.0 3.5 24 168-191 16-39 (67)
8 2zxe_G FXYD10, phospholemman-l 9.3 2.9E+02 0.0098 19.5 3.3 24 168-191 18-41 (74)
9 3lri_A Protein (insulin-like g 9.0 2.5E+02 0.0086 20.0 3.0 13 31-43 21-33 (83)
10 2v33_A E1 envelope glycoprotei 8.4 83 0.0028 23.2 0.2 21 85-105 20-44 (91)
No 1
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}
Probab=100.00 E-value=5.9e-35 Score=222.75 Aligned_cols=88 Identities=39% Similarity=0.850 Sum_probs=83.6
Q ss_pred CCCccceeeCCCCCHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHHhCCCCCCCCCCCceEEee-
Q 029582 16 HSTALYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDFAGAAATNA- 94 (191)
Q Consensus 16 ~~~slwCVak~~~~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~~~~~~~aCdF~GtAtltt- 94 (191)
..+++|||+|+++++++||++|||||++++||++|++||+||+||++++|+|||||+|||++++..++|||+|+|+|++
T Consensus 8 ~~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~it~~ 87 (101)
T 2jon_A 8 KAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSWNCDFSQTATLTNT 87 (101)
T ss_dssp CCCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGGGCCSCSSEEEESS
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCeEEEeec
Confidence 3467899999999999999999999998889999999999999999999999999999999999999999999999987
Q ss_pred ---cCceeeccc
Q 029582 95 ---AGGCVYPST 103 (191)
Q Consensus 95 ---~gsC~fp~s 103 (191)
+++|+|+.+
T Consensus 88 dPS~g~C~f~~~ 99 (101)
T 2jon_A 88 NPSYGACNFPSG 99 (101)
T ss_dssp CCCCSSSCCCCS
T ss_pred CCCCCceecCCC
Confidence 789999874
No 2
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=99.92 E-value=1.3e-26 Score=218.09 Aligned_cols=89 Identities=17% Similarity=0.294 Sum_probs=82.5
Q ss_pred ccceeeCCC-CCHHHHHHHHHHhhCCCCCCcccCCCCc-----ccCCCChhhhHhHHHHHHHHHhCCCCCCCCCCCc---
Q 029582 19 ALYCLCKQG-LSQSVLQKAIDYACGAGADCTPILQNGV-----CWNPNTVQDHCNYAVNSYFQRKGQTPGSCDFAGA--- 89 (191)
Q Consensus 19 slwCVak~~-~~~~~Lq~~ldyACg~g~DCs~I~~gGs-----Cyspct~~~haSYAfNsYYQ~~~~~~~aCdF~Gt--- 89 (191)
++|||+|++ +++++||++|||||++ +||++|++||+ ||+||++++|+|||||+|||++++..++|||+|.
T Consensus 396 ~~~Cv~~~~~~~~~~l~~~~~yaC~~-~dC~~I~~~g~~g~yG~~~~~~~~~~~Sya~n~yyq~~~~~~~~C~F~g~~~~ 474 (555)
T 2w61_A 396 ILPCEIVPFGAESGKYEEYFSYLCSK-VDCSDILANGKTGEYGEFSDCSVEQKLSLQLSKLYCKIGANDRHCPLNDKNVY 474 (555)
T ss_dssp HCSEEECCTTCCGGGHHHHHHHHTTT-SCGGGGCEETTTTEECTTTTSCHHHHHHHHHHHHHHHHCCCSSCCSCCCTTEE
T ss_pred CCeeecCCCCCCHHHHHHHHHHHhCc-CCCccccCCCcCCCccccCCCCHHHHHHHHHHHHHHHcCCCCCCCCCCCCccc
Confidence 589999999 9999999999999997 89999999999 6999999999999999999999999999999999
Q ss_pred ---eEEee---cCceeecccCCC-CC
Q 029582 90 ---AATNA---AGGCVYPSTGSP-GT 108 (191)
Q Consensus 90 ---Atltt---~gsC~fp~s~~~-gt 108 (191)
|++++ +++|+|+++... ++
T Consensus 475 ~~~a~~~~~~s~~~C~~~~~~~~~~~ 500 (555)
T 2w61_A 475 FNLESLQPLTSESICKNVFDSIRNIT 500 (555)
T ss_dssp ECGGGGSCCCTTCTTHHHHHHHHHHH
T ss_pred ccceEEEeCCCCCchHhHHHhhhccc
Confidence 99866 889999986654 53
No 3
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=16.96 E-value=51 Score=23.38 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.5
Q ss_pred HHHHHHHHH
Q 029582 68 YAVNSYFQR 76 (191)
Q Consensus 68 YAfNsYYQ~ 76 (191)
-|||+||+.
T Consensus 28 hAmNaYYrs 36 (80)
T 2gsv_A 28 HAMNSYYRS 36 (80)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999985
No 4
>1efe_A Mini-proinsulin, M2PI; linker, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=15.88 E-value=1.7e+02 Score=19.54 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhhCC-CCCCcccC-------CCCc----ccCCCChhhhHhH
Q 029582 30 QSVLQKAIDYACGA-GADCTPIL-------QNGV----CWNPNTVQDHCNY 68 (191)
Q Consensus 30 ~~~Lq~~ldyACg~-g~DCs~I~-------~gGs----Cyspct~~~haSY 68 (191)
-.+|-++|.++|+. +..=.+.. ..|- |+.+|+..+=.+|
T Consensus 8 G~~L~daL~~vC~~rgf~~~p~~rr~~~r~~RGIvdECC~~~Ct~~~L~~Y 58 (60)
T 1efe_A 8 GSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQCCTSICSLYQLENY 58 (60)
T ss_dssp HHHHHHHHHHHHCSSCCCCCCCCCSSSCTTCCSHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCcccCCccccccCCCCCCcHhhcCCCCCChHHHHHh
Confidence 36789999999986 32111221 1122 7888887765554
No 5
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=12.42 E-value=1.7e+02 Score=20.48 Aligned_cols=16 Identities=25% Similarity=0.601 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHh
Q 029582 175 SFALTLWVSCLVLLVW 190 (191)
Q Consensus 175 ~~~~~~~~~~~~~~~~ 190 (191)
+...++++..+++++|
T Consensus 17 vi~gilliGllllliw 32 (79)
T 2knc_B 17 VMGAILLIGLAALLIW 32 (79)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333444455555555
No 6
>1b9g_A Protein (growth factor IGF-1); NMR {Homo sapiens} SCOP: g.1.1.1
Probab=11.05 E-value=1.3e+02 Score=20.13 Aligned_cols=36 Identities=19% Similarity=0.457 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhCCCCCCcccCCCCc----ccCCCChhhhHhH
Q 029582 31 SVLQKAIDYACGAGADCTPILQNGV----CWNPNTVQDHCNY 68 (191)
Q Consensus 31 ~~Lq~~ldyACg~g~DCs~I~~gGs----Cyspct~~~haSY 68 (191)
++|-++|.++|+...- -....|- |+.+|+..+-.+|
T Consensus 8 ~~L~~aL~~vC~~rgf--~~~k~GIvdECC~~~Ct~~~L~~Y 47 (57)
T 1b9g_A 8 AELVDALQFVCGDRGF--YFNKPGIVDECCFRSCDLRRLEMY 47 (57)
T ss_dssp TTHHHHHHTTCSSSSC--CTTCCSHHHHHTTSSCCSSSGGGT
T ss_pred HHHHHHHHHHHcCCCc--cCCCCCcHhhhcCCCCCHHHHHHh
Confidence 4678899999986210 0112232 7888887765555
No 7
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=9.55 E-value=3.1e+02 Score=19.00 Aligned_cols=24 Identities=21% Similarity=0.123 Sum_probs=13.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhC
Q 029582 168 KLTNFFFSFALTLWVSCLVLLVWG 191 (191)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~ 191 (191)
.++...++|..+|.+..+++++++
T Consensus 16 tLRigGLifA~vLfi~GI~iilS~ 39 (67)
T 2jp3_A 16 SLQLGGLIFGGLLCIAGIALALSG 39 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HheecchhhHHHHHHHHHHHHHcC
Confidence 344455555556666666666653
No 8
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=9.25 E-value=2.9e+02 Score=19.53 Aligned_cols=24 Identities=25% Similarity=0.290 Sum_probs=13.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhC
Q 029582 168 KLTNFFFSFALTLWVSCLVLLVWG 191 (191)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~ 191 (191)
.+|...++|..+|.+..+++++++
T Consensus 18 tLRigGLifA~vLfi~GI~iilS~ 41 (74)
T 2zxe_G 18 RLRVVGLIVAAVLCVIGIIILLAG 41 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HheeccchhHHHHHHHHHHHHHcC
Confidence 344455566666666666666653
No 9
>3lri_A Protein (insulin-like growth factor I); protein structure, distance geometry; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=9.00 E-value=2.5e+02 Score=20.04 Aligned_cols=13 Identities=31% Similarity=0.802 Sum_probs=11.3
Q ss_pred HHHHHHHHHhhCC
Q 029582 31 SVLQKAIDYACGA 43 (191)
Q Consensus 31 ~~Lq~~ldyACg~ 43 (191)
..|-++|.++|+.
T Consensus 21 ~~LvdaL~~VCg~ 33 (83)
T 3lri_A 21 AELVDALQFVCGD 33 (83)
T ss_dssp THHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCc
Confidence 6788999999975
No 10
>2v33_A E1 envelope glycoprotein; transmembrane, viral protein; 1.55A {Semliki forest virus} SCOP: b.1.18.4
Probab=8.40 E-value=83 Score=23.16 Aligned_cols=21 Identities=29% Similarity=0.528 Sum_probs=0.0
Q ss_pred CCCCceEEee----cCceeecccCC
Q 029582 85 DFAGAAATNA----AGGCVYPSTGS 105 (191)
Q Consensus 85 dF~GtAtltt----~gsC~fp~s~~ 105 (191)
||+|.|+|.. .|+|...+-.+
T Consensus 20 DFGGvatl~Y~a~k~GkCaVHs~S~ 44 (91)
T 2v33_A 20 DFGGVLTLTYKTNKNGDCSVHSHSN 44 (91)
T ss_dssp EEEEEEEEEEEESSCEEEEEECCCS
T ss_pred CCCCeEEEEEecCCCccceeeccCc
Done!