Query 029582
Match_columns 191
No_of_seqs 171 out of 730
Neff 4.5
Searched_HMMs 13730
Date Tue Mar 26 01:13:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029582.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029582hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wqji1 g.1.1.1 (I:2-63) Insul 27.3 26 0.0019 22.4 3.2 38 31-68 7-59 (62)
2 d2v5pc1 g.1.1.1 (C:6-63) Insul 24.1 34 0.0025 21.6 3.3 38 31-68 6-54 (58)
3 d2gsva1 a.23.7.1 (A:3-69) Hypo 19.6 20 0.0014 23.2 1.3 9 68-76 26-34 (67)
4 d1of9a_ a.64.1.4 (A:) Ameobapo 14.4 91 0.0066 19.0 3.8 34 29-76 23-56 (77)
5 d1nkla_ a.64.1.1 (A:) NK-lysin 13.4 95 0.0069 18.8 3.6 37 25-76 19-55 (78)
6 d1iq0a1 a.27.1.1 (A:467-592) A 9.2 52 0.0038 22.4 1.2 25 63-87 66-90 (126)
7 d2v33a1 b.1.18.4 (A:293-382) F 9.0 31 0.0023 23.6 -0.1 18 85-102 19-40 (90)
8 d1pb5a_ g.65.1.1 (A:) Neurogen 8.1 28 0.0021 19.9 -0.6 11 38-48 24-35 (35)
9 d1l9la_ a.64.1.1 (A:) Granulys 7.8 2.1E+02 0.015 17.2 3.8 36 27-76 20-55 (74)
10 d2gtga1 a.64.1.1 (A:2-79) Sapo 7.5 1.7E+02 0.013 17.2 3.2 39 24-76 18-56 (78)
No 1
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.34 E-value=26 Score=22.42 Aligned_cols=38 Identities=18% Similarity=0.384 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhCC-CCCCcccC--------CCCc------ccCCCChhhhHhH
Q 029582 31 SVLQKAIDYACGA-GADCTPIL--------QNGV------CWNPNTVQDHCNY 68 (191)
Q Consensus 31 ~~Lq~~ldyACg~-g~DCs~I~--------~gGs------Cyspct~~~haSY 68 (191)
..|-++|-++||+ |..=++-. ..-. |+++|++.+--+|
T Consensus 7 s~LvdaL~~VCG~rGfy~~~~~~~~~~~~~r~krGIVeeCC~~~C~l~~Le~Y 59 (62)
T d1wqji1 7 AELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMY 59 (62)
T ss_dssp HHHHHHHHHHHGGGCBCSEEECSSCCBTTBCSEEEHHHHHTTTCCCHHHHHTT
T ss_pred HHHHHHHHHHHccCCCCcCCCCCCCcccccCCCCChhhhccCCCCCHHHHHhh
Confidence 5688999999997 43222110 0001 8999988765544
No 2
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.09 E-value=34 Score=21.61 Aligned_cols=38 Identities=21% Similarity=0.524 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhCC-CCCCc-ccCCC-----Cc----ccCCCChhhhHhH
Q 029582 31 SVLQKAIDYACGA-GADCT-PILQN-----GV----CWNPNTVQDHCNY 68 (191)
Q Consensus 31 ~~Lq~~ldyACg~-g~DCs-~I~~g-----Gs----Cyspct~~~haSY 68 (191)
..|-++|-++||+ |..=+ +.... |- |+++|++.+--+|
T Consensus 6 s~LVdaL~~VCg~rGfy~~~~~~~~~r~~rGIVeeCC~~~C~l~~Le~Y 54 (58)
T d2v5pc1 6 GELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETY 54 (58)
T ss_dssp HHHHHHHHHHSTTSCBCCCC----------CHHHHHTSSCCCSHHHHTT
T ss_pred HHHHHHHHHHHcCCCccccCCccccCCCCCCchhhcCCCCCCHHHHHHh
Confidence 5688999999997 32111 11111 11 8888887665444
No 3
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=19.57 E-value=20 Score=23.24 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.5
Q ss_pred HHHHHHHHH
Q 029582 68 YAVNSYFQR 76 (191)
Q Consensus 68 YAfNsYYQ~ 76 (191)
-|||+||..
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999985
No 4
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=14.43 E-value=91 Score=19.03 Aligned_cols=34 Identities=9% Similarity=0.243 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHH
Q 029582 29 SQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQR 76 (191)
Q Consensus 29 ~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~ 76 (191)
..+++.+.++.+|.. -|...++.+...++.|...
T Consensus 23 t~~~I~~~l~~~C~~--------------lp~~~~~~C~~~v~~y~~~ 56 (77)
T d1of9a_ 23 GADKVKDYISSLCNK--------------ASGFIATLCTKVLDFGIDK 56 (77)
T ss_dssp CSHHHHHHHHHHHTT--------------CSSTTHHHHHHHHHHCHHH
T ss_pred cHHHHHHHHHHHHHH--------------CChHHHHHhHHHHHHHHHH
Confidence 456799999999985 2445677788888888753
No 5
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=13.37 E-value=95 Score=18.78 Aligned_cols=37 Identities=14% Similarity=0.340 Sum_probs=27.1
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHH
Q 029582 25 KQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQR 76 (191)
Q Consensus 25 k~~~~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~ 76 (191)
+++...+++.+.++.+|.. -| ..++.+...++.|+..
T Consensus 19 ~~~~t~~~I~~~l~~~C~~--------------lp-~~~~~C~~~v~~y~~~ 55 (78)
T d1nkla_ 19 GPQPNEDTVTQAASQVCDK--------------LK-ILRGLCKKIMRSFLRR 55 (78)
T ss_dssp CSSCCHHHHHHHHHHHHHH--------------SC-STHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhc--------------CC-cHHHHHHHHHHHHHHH
Confidence 4456789999999999974 13 3566788888887753
No 6
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=9.22 E-value=52 Score=22.45 Aligned_cols=25 Identities=8% Similarity=0.078 Sum_probs=17.0
Q ss_pred hhhHhHHHHHHHHHhCCCCCCCCCC
Q 029582 63 QDHCNYAVNSYFQRKGQTPGSCDFA 87 (191)
Q Consensus 63 ~~haSYAfNsYYQ~~~~~~~aCdF~ 87 (191)
...++=+||+||+..+.....|.+.
T Consensus 66 l~~La~~F~~fY~~~~~~~~~~~i~ 90 (126)
T d1iq0a1 66 LLDLAASWNAYYNARENGQPATPVL 90 (126)
T ss_dssp HHHHHHHHHHHHHCEETTEESSCST
T ss_pred HHHHHHHHHHHHHhccccccccccc
Confidence 4556778999999776555555543
No 7
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=8.99 E-value=31 Score=23.64 Aligned_cols=18 Identities=33% Similarity=0.597 Sum_probs=14.8
Q ss_pred CCCCceEEee----cCceeecc
Q 029582 85 DFAGAAATNA----AGGCVYPS 102 (191)
Q Consensus 85 dF~GtAtltt----~gsC~fp~ 102 (191)
||+|.|+|.. .|+|...+
T Consensus 19 DfGGvatl~Y~a~k~GkCaVHs 40 (90)
T d2v33a1 19 DFGGVLTLTYKTNKNGDCSVHS 40 (90)
T ss_dssp EEEEEEEEEEEESSCEEEEEEC
T ss_pred CcCCeEEEEEecCCCccceeEc
Confidence 8999999998 68897554
No 8
>d1pb5a_ g.65.1.1 (A:) Neurogenic locus notch homolog protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.08 E-value=28 Score=19.93 Aligned_cols=11 Identities=55% Similarity=1.262 Sum_probs=6.7
Q ss_pred HHhhCC-CCCCc
Q 029582 38 DYACGA-GADCT 48 (191)
Q Consensus 38 dyACg~-g~DCs 48 (191)
++|||. +.||+
T Consensus 24 nhaCgWDgGDCS 35 (35)
T d1pb5a_ 24 NHACGWDGGDCS 35 (35)
T ss_dssp STTTTGGGGSCC
T ss_pred ccccCCCCCCCC
Confidence 356765 46774
No 9
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.78 E-value=2.1e+02 Score=17.17 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHH
Q 029582 27 GLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQR 76 (191)
Q Consensus 27 ~~~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~ 76 (191)
+.+.+++.+.++.+|.. -|...++.+.-.++.|...
T Consensus 20 n~t~~~I~~~l~~~C~~--------------lp~~~~~~C~~lv~~Y~~~ 55 (74)
T d1l9la_ 20 KPTQRSVSNAATRVCRT--------------GRSRWRDVCRNFMRRYQSR 55 (74)
T ss_dssp SCCHHHHHHHHHHGGGS--------------SCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhHHHH--------------CCHHHHHHHHHHHHHHHHH
Confidence 34678899999999985 2334677777888887653
No 10
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.46 E-value=1.7e+02 Score=17.23 Aligned_cols=39 Identities=18% Similarity=0.425 Sum_probs=0.0
Q ss_pred eCCCCCHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHH
Q 029582 24 CKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQR 76 (191)
Q Consensus 24 ak~~~~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~ 76 (191)
.+++...+++.+.++.+|.. -|-..++.+...++.|...
T Consensus 18 l~~~~t~~~I~~~l~~~C~~--------------lp~~~~~~C~~~v~~y~~~ 56 (78)
T d2gtga1 18 IDNNKTEKEILDAFDKMCSK--------------LPKSLSEECQEVVDTYGSS 56 (78)
T ss_dssp HHTTCCHHHHHHHHHHHTTS--------------SCHHHHHHHHHHHHHHHHH
T ss_pred HhCCchHHHHHHHHHHHHHh--------------CCcchhhhhHHHHHHHHHH
Done!