Query 029586
Match_columns 191
No_of_seqs 19 out of 21
Neff 2.7
Searched_HMMs 29240
Date Tue Mar 26 01:20:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h7y_A Dual specificity protei 37.9 21 0.0007 29.2 2.8 37 84-122 3-39 (161)
2 2ooe_A Cleavage stimulation fa 35.0 1.8E+02 0.0062 24.1 8.2 41 91-131 43-83 (530)
3 2j8w_A Cytochrome C'; heme, ir 29.6 88 0.003 22.9 4.9 48 129-177 75-122 (129)
4 2ooe_A Cleavage stimulation fa 28.9 1.6E+02 0.0055 24.5 6.9 28 91-118 422-449 (530)
5 2ykz_A Cytochrome C'; electron 28.8 94 0.0032 22.7 4.9 48 129-177 72-119 (127)
6 2kat_A Uncharacterized protein 26.9 1.3E+02 0.0043 19.2 8.6 76 83-177 7-83 (115)
7 1gqa_A Cytochrome C'; electron 26.5 1.6E+02 0.0056 21.5 6.0 47 129-177 76-122 (130)
8 1mqv_A Cytochrome C'; four-hel 25.8 1.8E+02 0.006 21.2 6.0 47 128-177 70-116 (125)
9 3nj2_A DUF269-containing prote 24.8 49 0.0017 27.4 3.0 36 68-133 21-56 (174)
10 1cpq_A Cytochrome C'; electron 24.2 1.3E+02 0.0043 22.2 4.9 48 129-177 74-121 (129)
11 4e6h_A MRNA 3'-END-processing 24.1 2.3E+02 0.0079 26.3 7.7 80 92-184 502-584 (679)
12 3de8_A Soluble cytochrome B562 23.1 1.1E+02 0.0037 21.7 4.2 44 128-176 57-100 (106)
13 2rkl_A Vacuolar protein sortin 22.8 86 0.0029 21.3 3.4 16 160-175 33-48 (53)
14 3jz0_A Lincosamide nucleotidyl 22.1 57 0.0019 27.8 3.0 70 106-176 106-200 (287)
15 2f6m_A Suppressor protein STP2 20.1 78 0.0027 22.2 2.8 14 112-125 34-47 (65)
No 1
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=37.85 E-value=21 Score=29.16 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=23.7
Q ss_pred HHHHHhccCcchhhhHHHHHHHhhCChhhhhHHHHHHhh
Q 029586 84 LQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (191)
Q Consensus 84 LqQiv~S~~~adiWgL~Arw~~~~Gd~~~csEA~LKQVR 122 (191)
+.||+=++-++|.|=.|++--+.+||+..= ++|.+||
T Consensus 3 ~~~~~~~p~~yd~W~~yl~llE~~g~p~~d--~~l~rlr 39 (161)
T 4h7y_A 3 LGSIMMMANNPEDWLSLLLKLEKNSVPLSD--ALLNKLI 39 (161)
T ss_dssp -------CCSHHHHHHHHHHHHHHTCSCCH--HHHHHHH
T ss_pred ccceeeCCCCHHHHHHHHHHHHHcCCCchh--hHHHHHH
Confidence 467777888999999999999999998322 4444444
No 2
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=35.00 E-value=1.8e+02 Score=24.14 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=22.7
Q ss_pred cCcchhhhHHHHHHHhhCChhhhhHHHHHHhhhhcCCcccc
Q 029586 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWK 131 (191)
Q Consensus 91 ~~~adiWgL~Arw~~~~Gd~~~csEA~LKQVRslqgS~~~k 131 (191)
+.+..+|-.|+.+....|+..-+.+.+-+-|......+.|.
T Consensus 43 P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~~~lw~ 83 (530)
T 2ooe_A 43 PSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWK 83 (530)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCChHHHH
Confidence 34456666666666666666666555555454443333443
No 3
>2j8w_A Cytochrome C'; heme, iron, transport, metal-binding, electron transfer, electron transport; HET: HEM; 1.29A {Rubrivivax gelatinosus} SCOP: a.24.3.2 PDB: 1jaf_A* 2j9b_A*
Probab=29.63 E-value=88 Score=22.89 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=32.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHH
Q 029586 129 LWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQV 177 (191)
Q Consensus 129 ~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk~~lKqa 177 (191)
-|.|++.|++.+.+--+-...-.+.. .+|....|.++=.-+-++||.-
T Consensus 75 IW~~~~~F~~~~~~~~~aa~~L~~aA-~~~D~~~~~~a~~~v~~sCkaC 122 (129)
T 2j8w_A 75 VWSDAAGFKAAADKFAAAVDKLDAAG-KTGDFAQIKAAVGETGGACKGC 122 (129)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHH
Confidence 48899999988776555444333333 4567777877777777777754
No 4
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=28.89 E-value=1.6e+02 Score=24.45 Aligned_cols=28 Identities=7% Similarity=-0.006 Sum_probs=17.9
Q ss_pred cCcchhhhHHHHHHHhhCChhhhhHHHH
Q 029586 91 ESSADMWGLYARWLKNKGDLTMCSEALL 118 (191)
Q Consensus 91 ~~~adiWgL~Arw~~~~Gd~~~csEA~L 118 (191)
+..+++|-.|+++....|+..-|.+.+=
T Consensus 422 p~~~~~~~~~~~~~~~~g~~~~Ar~~~~ 449 (530)
T 2ooe_A 422 GDIPEYVLAYIDYLSHLNEDNNTRVLFE 449 (530)
T ss_dssp TTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCHhhHHHHHH
Confidence 3446777777777777777766554433
No 5
>2ykz_A Cytochrome C'; electron transport, haemoprotein, 4-helix bundle; HET: PCA HEC; 0.84A {Achromobacter xylosoxidans} PDB: 3zqv_A* 2xlm_A* 1e83_A* 1e84_A* 1e86_A* 1e85_A* 2yld_A* 2yli_A* 1cgo_A* 2xle_A* 2xm0_A* 2xlw_A* 2xld_A* 2xm4_A* 2xlo_A* 2yl0_A* 2yl1_A* 2ylg_A* 3zqy_A* 2xl6_A* ...
Probab=28.76 E-value=94 Score=22.67 Aligned_cols=48 Identities=21% Similarity=0.187 Sum_probs=32.7
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHH
Q 029586 129 LWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQV 177 (191)
Q Consensus 129 ~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk~~lKqa 177 (191)
-|.|++.|++.+.+--+-...-.+.. .+|....|.++=.-+-++||.-
T Consensus 72 IW~~~~~F~~~~~~~~~aa~~l~~aA-~~gD~~~~~~a~~~v~~sCkaC 119 (127)
T 2ykz_A 72 IWSDAASFKQKQQAFQDNIVKLSAAA-DAGDLDKLRAAFGDVGASCKAC 119 (127)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHH
Confidence 58999999988776554444333333 4567777777777777777754
No 6
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=26.89 E-value=1.3e+02 Score=19.18 Aligned_cols=76 Identities=11% Similarity=-0.023 Sum_probs=46.9
Q ss_pred HHHHHHhc-cCcchhhhHHHHHHHhhCChhhhhHHHHHHhhhhcCCccccchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 029586 83 ILQQVVRS-ESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRR 161 (191)
Q Consensus 83 iLqQiv~S-~~~adiWgL~Arw~~~~Gd~~~csEA~LKQVRslqgS~~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~r 161 (191)
.++++++. +..+.+|-..+..+...|+..-|-+.+-+-++-.. .++.+-..|..+|... .
T Consensus 7 ~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------------~~~~~~~~la~~~~~~-------g 67 (115)
T 2kat_A 7 RLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP------------TYSVAWKWLGKTLQGQ-------G 67 (115)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHH-------T
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC------------CcHHHHHHHHHHHHHc-------C
Confidence 34555543 46689999999999999999988777666554321 1233444555555542 2
Q ss_pred hHHHHHHHHHHHHHHH
Q 029586 162 ELFAAEMHLKNVLKQV 177 (191)
Q Consensus 162 eL~~A~MHLk~~lKqa 177 (191)
+...|..+++.+++..
T Consensus 68 ~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 68 DRAGARQAWESGLAAA 83 (115)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 4455666666655543
No 7
>1gqa_A Cytochrome C'; electron transport, heme; HET: HEC; 1.8A {Rhodobacter sphaeroides} SCOP: a.24.3.2
Probab=26.49 E-value=1.6e+02 Score=21.54 Aligned_cols=47 Identities=26% Similarity=0.379 Sum_probs=32.0
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHH
Q 029586 129 LWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQV 177 (191)
Q Consensus 129 ~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk~~lKqa 177 (191)
-|.|++.|++.+.+--+-...-.+.. .+| ...|.++=.-+-++||.-
T Consensus 76 IW~~~~~F~~~~~~~~~aa~~l~~aa-~~g-~~~~~~a~~~v~~sCkaC 122 (130)
T 1gqa_A 76 IWQDADGFQAKGMAFFEAVAALEPAA-GAG-QKELAAAVGKVGGTCKSC 122 (130)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHH-TSC-HHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHH-Hhc-HHHHHHHHHHHHhHHHHH
Confidence 58899999988776555444433333 456 777777777777777753
No 8
>1mqv_A Cytochrome C'; four-helix bundle, electron transport; HET: HEM; 1.78A {Rhodopseudomonas palustris} SCOP: a.24.3.2 PDB: 1a7v_A*
Probab=25.80 E-value=1.8e+02 Score=21.17 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=31.4
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHH
Q 029586 128 DLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQV 177 (191)
Q Consensus 128 ~~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk~~lKqa 177 (191)
.-|.|++.|++.+.+--+-...-.+.. + ....|.++=..+-++||.-
T Consensus 70 ~IW~~~~~F~~~~~~~~~aa~~l~~aa--~-d~~~~~~a~~~v~~sCkaC 116 (125)
T 1mqv_A 70 KIFEDKAKFDDLFAKLAAAATAAQGTI--K-DEASLKANIGGVLGNCKSC 116 (125)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHC--C-SHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHh--c-CHHHHHHHHHHHHhHHHHH
Confidence 458999999988877665555444444 3 5666777766666666643
No 9
>3nj2_A DUF269-containing protein; cyanobacteria, circadium rhythms, nitrogen fixation, unknown; 1.59A {Cyanothece SP}
Probab=24.83 E-value=49 Score=27.37 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=25.6
Q ss_pred ccchhhhHHHHHHHHHHHHHHhccCcchhhhHHHHHHHhhCChhhhhHHHHHHhhhhcCCccccch
Q 029586 68 GRSRENEHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDR 133 (191)
Q Consensus 68 g~~re~~qL~e~lGkiLqQiv~S~~~adiWgL~Arw~~~~Gd~~~csEA~LKQVRslqgS~~~kD~ 133 (191)
+.+-|++-|+-+---+++++| ||+||+.+.|-|...
T Consensus 21 ~~~~~~~~~l~~~~pF~keLv------------------------------~QiRA~DtyG~w~~~ 56 (174)
T 3nj2_A 21 MTNSETNTLLVEQSPFLQSLV------------------------------QQIRAYDHYGVYRTW 56 (174)
T ss_dssp ---CHHHHHHHHHCHHHHHHH------------------------------HHHHHSCTTCTTTTS
T ss_pred cccccccccccccCHHHHHHH------------------------------HHHHHccCcCcccCC
Confidence 456788888887777777554 899999998887643
No 10
>1cpq_A Cytochrome C'; electron transport; HET: HEM; 1.72A {Rhodobacter capsulatus} SCOP: a.24.3.2 PDB: 1eky_A 1nbb_A* 1rcp_A* 1cpr_A*
Probab=24.20 E-value=1.3e+02 Score=22.16 Aligned_cols=48 Identities=21% Similarity=0.229 Sum_probs=32.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHH
Q 029586 129 LWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQV 177 (191)
Q Consensus 129 ~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk~~lKqa 177 (191)
-|.|++.|++.+.+--+-...-.+.. .+|....+.++=..+-++||.-
T Consensus 74 IW~~~~~F~~~~~~~~~aa~~L~~aA-~~gD~~~~~~a~~~v~~~CkaC 121 (129)
T 1cpq_A 74 IWANMDDFGAKGKAMHEAGGAVIAAA-NAGDGAAFGAALQKLGGTCKAC 121 (129)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhHHHHH
Confidence 58999999988776554443333333 4567777777777777777754
No 11
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=24.07 E-value=2.3e+02 Score=26.29 Aligned_cols=80 Identities=10% Similarity=0.123 Sum_probs=41.7
Q ss_pred CcchhhhHHHHHHHhhCChhhhhHHHHHHhhhhcCCccccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHH
Q 029586 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLK 171 (191)
Q Consensus 92 ~~adiWgL~Arw~~~~Gd~~~csEA~LKQVRslqgS~~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk 171 (191)
...++|-.|+++....|+..-|+.-+=+-|..... ...+..|+..|++.-..-|........+--+.
T Consensus 502 ~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~-------------~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~ 568 (679)
T 4e6h_A 502 TDGEYINKYLDFLIYVNEESQVKSLFESSIDKISD-------------SHLLKMIFQKVIFFESKVGSLNSVRTLEKRFF 568 (679)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS-------------TTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44566666666666666665555333222222111 12456788888888777776655444333222
Q ss_pred HHH---HHHHHHHHHH
Q 029586 172 NVL---KQVKHLIIRY 184 (191)
Q Consensus 172 ~~l---Kqa~~f~~~~ 184 (191)
... +....|+.||
T Consensus 569 ~~~P~~~~~~~f~~ry 584 (679)
T 4e6h_A 569 EKFPEVNKLEEFTNKY 584 (679)
T ss_dssp HHSTTCCHHHHHHHHT
T ss_pred HhCCCCcHHHHHHHHh
Confidence 222 2234566665
No 12
>3de8_A Soluble cytochrome B562; Cu-stabilized dimeric superstructure, electron transport, heme, iron, metal-binding, periplasm, transport; HET: HEM; 1.72A {Escherichia coli} SCOP: a.24.3.1 PDB: 2qla_A* 3de9_A* 3c62_A* 3c63_A* 2bc5_A* 3l1m_A* 1qq3_A* 1apc_A 1qpu_A* 256b_A* 3foo_A* 3fop_A* 3nmi_A* 3nmj_A* 3nmk_A* 1lm3_B* 1m6t_A 1yyj_A 1yyx_A 3hnk_A* ...
Probab=23.08 E-value=1.1e+02 Score=21.66 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=27.3
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHH
Q 029586 128 DLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQ 176 (191)
Q Consensus 128 ~~~kD~~rF~~yA~ASl~lCr~y~e~~~s~Gs~reL~~A~MHLk~~lKq 176 (191)
..|.+++.|.+|..+..+|-. ...+|...++-++=.-+..++|.
T Consensus 57 ~iw~~~~~F~~l~~~~~~l~~-----aa~~gd~~~~k~a~~~v~~~Ck~ 100 (106)
T 3de8_A 57 EMHDFRHGFDILVGQIHDALH-----LANEGKVKEAQAAAEQLKTTCNA 100 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----HHHTTCHHHHHHHHHHTHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHH-----HHHcCCHHHHHHHHHHHHHHHHH
Confidence 467788888888777766632 12356666666665555555554
No 13
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=22.76 E-value=86 Score=21.31 Aligned_cols=16 Identities=25% Similarity=0.264 Sum_probs=13.1
Q ss_pred hhhHHHHHHHHHHHHH
Q 029586 160 RRELFAAEMHLKNVLK 175 (191)
Q Consensus 160 ~reL~~A~MHLk~~lK 175 (191)
-.+..+|..+|+.+|+
T Consensus 33 feDv~tA~~~L~~AL~ 48 (53)
T 2rkl_A 33 YEDLPTAKDELTKALD 48 (53)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHH
Confidence 5788899998888775
No 14
>3jz0_A Lincosamide nucleotidyltransferase; alpha-beta structure, transferase-antibiotic CO; HET: APC CLY; 2.00A {Enterococcus faecium} PDB: 3jyy_A*
Probab=22.07 E-value=57 Score=27.79 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=48.6
Q ss_pred hhCChhhhhHHHHHHhhhhcCCccccchH---------HHHHHHH-------------HHHHHHHHHHH---HhcCCCch
Q 029586 106 NKGDLTMCSEALLKQVRSYQGSDLWKDRD---------RFKRFSY-------------ASLELCKVYME---ISSSSGSR 160 (191)
Q Consensus 106 ~~Gd~~~csEA~LKQVRslqgS~~~kD~~---------rF~~yA~-------------ASl~lCr~y~e---~~~s~Gs~ 160 (191)
.++|++.|....|++.....|+.||+|.. .|+.+.. .-...|..+.- ....--.|
T Consensus 106 ~riDl~l~~~~~l~~~~~~~~~~~~~d~~~~VLlDKDg~l~~~~~~~~~~~~~~ps~~~f~~~~NeFw~~~~~~a~~l~R 185 (287)
T 3jz0_A 106 IRGEFHFLSEKDMNIIPSFKDSGYIPDTKAMLIYDETGQLENYLSEISGARPNRLTEENANFLLCNFSNLWLMGINVLKR 185 (287)
T ss_dssp CEEEEEEEEGGGGGGGGGGGGGSCCCCHHHHEEEESSSHHHHHHHTTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeeHHHHHHHhccccccccccccceEEEcCCCCccccCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 58899999999999888899999998775 3554441 12346665421 11111379
Q ss_pred hhHHHHHHHHHHHHHH
Q 029586 161 RELFAAEMHLKNVLKQ 176 (191)
Q Consensus 161 reL~~A~MHLk~~lKq 176 (191)
.||..|-.||. .+++
T Consensus 186 gEl~yA~~~l~-~~r~ 200 (287)
T 3jz0_A 186 GEYARSLELLS-QLQK 200 (287)
T ss_dssp TCHHHHHHHHH-HHHH
T ss_pred CCHHHHHHHHH-HHHH
Confidence 99999999996 4543
No 15
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=20.06 E-value=78 Score=22.17 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=10.8
Q ss_pred hhhHHHHHHhhhhc
Q 029586 112 MCSEALLKQVRSYQ 125 (191)
Q Consensus 112 ~csEA~LKQVRslq 125 (191)
+.-++.||+||+|.
T Consensus 34 I~l~~ylK~vR~La 47 (65)
T 2f6m_A 34 IPLDTFVKQGRELA 47 (65)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 45578899999884
Done!