BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029591
(191 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255568956|ref|XP_002525448.1| TATA-box binding protein, putative [Ricinus communis]
gi|223535261|gb|EEF36938.1| TATA-box binding protein, putative [Ricinus communis]
Length = 201
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/181 (96%), Positives = 179/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 21 GIVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 80
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 81 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 140
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 141 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 200
Query: 191 Q 191
Q
Sbjct: 201 Q 201
>gi|218193429|gb|EEC75856.1| hypothetical protein OsI_12863 [Oryza sativa Indica Group]
Length = 190
Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 177/188 (94%), Positives = 180/188 (95%), Gaps = 3/188 (1%)
Query: 4 YICYLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTAL 63
YIC L+ A +NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTAL
Sbjct: 2 YICMLVCAAK---RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTAL 58
Query: 64 IFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEG 123
IFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEG
Sbjct: 59 IFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEG 118
Query: 124 LAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
LAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVL
Sbjct: 119 LAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVL 178
Query: 184 TEFRKVQQ 191
TEFRKVQQ
Sbjct: 179 TEFRKVQQ 186
>gi|115454423|ref|NP_001050812.1| Os03g0657000 [Oryza sativa Japonica Group]
gi|73919858|sp|Q8W0W4.2|TBP2_ORYSJ RecName: Full=TATA-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|31415973|gb|AAP50993.1| TATA-binding protein TBP2 [Oryza sativa Japonica Group]
gi|108710181|gb|ABF97976.1| TATA-binding protein 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113549283|dbj|BAF12726.1| Os03g0657000 [Oryza sativa Japonica Group]
gi|215686467|dbj|BAG87728.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 23 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 82
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 83 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 142
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 143 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQ 202
Query: 191 Q 191
Q
Sbjct: 203 Q 203
>gi|222625492|gb|EEE59624.1| hypothetical protein OsJ_11965 [Oryza sativa Japonica Group]
Length = 207
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 23 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 82
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 83 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 142
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 143 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQ 202
Query: 191 Q 191
Q
Sbjct: 203 Q 203
>gi|242084298|ref|XP_002442574.1| hypothetical protein SORBIDRAFT_08g022273 [Sorghum bicolor]
gi|241943267|gb|EES16412.1| hypothetical protein SORBIDRAFT_08g022273 [Sorghum bicolor]
Length = 200
Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|357119735|ref|XP_003561589.1| PREDICTED: TATA-box-binding protein 2-like [Brachypodium
distachyon]
Length = 200
Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLTEFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|242038657|ref|XP_002466723.1| hypothetical protein SORBIDRAFT_01g012880 [Sorghum bicolor]
gi|241920577|gb|EER93721.1| hypothetical protein SORBIDRAFT_01g012880 [Sorghum bicolor]
Length = 200
Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLTEFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|224285248|gb|ACN40350.1| unknown [Picea sitchensis]
Length = 200
Score = 355 bits (910), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPA FKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAHFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|4102725|gb|AAD10238.1| TATA-box binding protein [Phaseolus vulgaris]
Length = 200
Score = 355 bits (910), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|4102723|gb|AAD10237.1| TATA-box binding protein [Phaseolus vulgaris]
Length = 200
Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|18481630|gb|AAL73490.1|AF464907_1 TATA-binding protein TBP2 [Oryza sativa]
Length = 203
Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 23 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 82
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKI NIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 83 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIXNIVGSCDVKFPIRLEGLAYSHGA 142
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 143 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQ 202
Query: 191 Q 191
Q
Sbjct: 203 Q 203
>gi|135640|sp|P26357.1|TBP_SOLTU RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|21581|emb|CAA44360.1| TATA-binding protein [Solanum tuberosum]
Length = 200
Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 173/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAY+HGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYAHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|357155673|ref|XP_003577198.1| PREDICTED: TATA-box-binding protein 2-like [Brachypodium
distachyon]
Length = 202
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 22 GIVPMLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 81
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 82 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 141
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRM+QPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLTEFRKVQ
Sbjct: 142 FSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQ 201
Query: 191 Q 191
Q
Sbjct: 202 Q 202
>gi|356532171|ref|XP_003534647.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
Length = 200
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKL+LK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|974216|emb|CAA62224.1| TATA-box binding protein [Zea mays]
Length = 215
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL EFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLAEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|414872052|tpg|DAA50609.1| TPA: TATA-box-binding protein 1(TATA-binding factor 1)(TATA
sequence-binding protein 1) [Zea mays]
Length = 215
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL EFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLAEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|413933539|gb|AFW68090.1| TATA-binding protein2, partial [Zea mays]
Length = 205
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL+EFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|115489282|ref|NP_001067128.1| Os12g0580300 [Oryza sativa Japonica Group]
gi|77556288|gb|ABA99084.1| TATA-binding protein 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649635|dbj|BAF30147.1| Os12g0580300 [Oryza sativa Japonica Group]
gi|215736829|dbj|BAG95758.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 208
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 28 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 87
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 88 VCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 147
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 148 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQ 207
Query: 191 Q 191
Q
Sbjct: 208 Q 208
>gi|162459971|ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays]
gi|1729908|sp|P50159.1|TBP2_MAIZE RecName: Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|293906|gb|AAA65942.1| TATA-binding protein [Zea mays]
gi|195604414|gb|ACG24037.1| TATA-binding protein 2 [Zea mays]
gi|238014342|gb|ACR38206.1| unknown [Zea mays]
gi|413933540|gb|AFW68091.1| TATA-binding protein2 [Zea mays]
Length = 200
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL+EFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|351727953|ref|NP_001238202.1| TATA-box-binding protein [Glycine max]
gi|3122946|sp|Q42808.1|TBP_SOYBN RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|1220522|gb|AAA91948.1| TATA-box binding protein [Glycine max]
Length = 200
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|162459891|ref|NP_001105318.1| TATA-box-binding protein 1 [Zea mays]
gi|1729907|sp|P50158.1|TBP1_MAIZE RecName: Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit
gi|293904|gb|AAA65941.1| TATA-binding protein [Zea mays]
gi|414872053|tpg|DAA50610.1| TPA: TATA-box-binding protein 1(TATA-binding factor 1)(TATA
sequence-binding protein 1) [Zea mays]
Length = 200
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL EFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLAEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|326490497|dbj|BAJ84912.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV SCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRM+QPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLTEFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|449452638|ref|XP_004144066.1| PREDICTED: TATA-box-binding protein-like [Cucumis sativus]
gi|449493574|ref|XP_004159356.1| PREDICTED: TATA-box-binding protein-like [Cucumis sativus]
Length = 200
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|1351224|sp|P48511.1|TBP_MESCR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|841440|gb|AAA80641.1| TATA-binding protein [Mesembryanthemum crystallinum]
Length = 200
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|222617361|gb|EEE53493.1| hypothetical protein OsJ_36653 [Oryza sativa Japonica Group]
Length = 225
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 28 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 87
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 88 VCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 147
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 148 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQ 207
Query: 191 Q 191
Q
Sbjct: 208 Q 208
>gi|297746507|emb|CBI16563.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/181 (93%), Positives = 176/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 20 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|48374976|gb|AAT42173.1| TATA sequence-binding protein 2 (TBP-2) [Zea mays]
gi|413933541|gb|AFW68092.1| TATA-binding protein2 [Zea mays]
Length = 392
Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 169/175 (96%), Positives = 174/175 (99%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK
Sbjct: 173 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 232
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP
Sbjct: 233 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 292
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
ELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL+EFRK+QQ
Sbjct: 293 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQQ 347
>gi|224145959|ref|XP_002325828.1| global transcription factor group [Populus trichocarpa]
gi|222862703|gb|EEF00210.1| global transcription factor group [Populus trichocarpa]
Length = 201
Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNLDC+LDLK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 21 GIVPILQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 80
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 81 VCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 140
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPE+FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 141 FSSYEPEIFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 200
Query: 191 Q 191
Q
Sbjct: 201 Q 201
>gi|224123800|ref|XP_002319167.1| global transcription factor group [Populus trichocarpa]
gi|222857543|gb|EEE95090.1| global transcription factor group [Populus trichocarpa]
Length = 202
Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/181 (95%), Positives = 178/181 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 21 GIVPTLQNIVSTVNLDCKLELKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 80
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 81 VCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 140
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVR+ETYTAFENIYPVLTEFRKVQ
Sbjct: 141 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVREETYTAFENIYPVLTEFRKVQ 200
Query: 191 Q 191
Q
Sbjct: 201 Q 201
>gi|218187146|gb|EEC69573.1| hypothetical protein OsI_38882 [Oryza sativa Indica Group]
Length = 221
Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 24 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 83
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 84 VCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 143
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGK+V+TGAKVRDETYTAFENIYPVLTEFRKVQ
Sbjct: 144 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKLVLTGAKVRDETYTAFENIYPVLTEFRKVQ 203
Query: 191 Q 191
Q
Sbjct: 204 Q 204
>gi|356568214|ref|XP_003552308.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
Length = 200
Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTV+LDCKL+LK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVSLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|356571702|ref|XP_003554013.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
Length = 200
Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 176/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKL+LK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|225435804|ref|XP_002285755.1| PREDICTED: TATA-box-binding protein-like [Vitis vinifera]
Length = 200
Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/181 (93%), Positives = 176/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 20 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|48374984|gb|AAT42180.1| TATA sequence-binding protein 1 (TBP-1) [Zea mays]
gi|414872054|tpg|DAA50611.1| TPA: TATA sequence-binding protein 1 [Zea mays]
Length = 287
Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/176 (97%), Positives = 174/176 (98%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA
Sbjct: 102 VRNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 161
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE
Sbjct: 162 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 221
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
PELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVL EFRKVQQ
Sbjct: 222 PELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLAEFRKVQQ 277
>gi|363814312|ref|NP_001242795.1| uncharacterized protein LOC100810213 [Glycine max]
gi|255644444|gb|ACU22726.1| unknown [Glycine max]
Length = 200
Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 176/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFP KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPPKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|417882|sp|Q02879.1|TBP2_WHEAT RecName: Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|21877|emb|CAA79268.1| DNA binding protein [Triticum aestivum]
gi|170778|gb|AAA34307.1| DNA-binding protein [Triticum aestivum]
Length = 201
Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 169/181 (93%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 21 GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 80
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV SCDVKFPIRLEGLAYSHGA
Sbjct: 81 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRLEGLAYSHGA 140
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRM+QPKIVLLIFVSGKIV+TGAKVR+ETY+AFENIYPVLTEFRKVQ
Sbjct: 141 FSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVREETYSAFENIYPVLTEFRKVQ 200
Query: 191 Q 191
Q
Sbjct: 201 Q 201
>gi|217075508|gb|ACJ86114.1| unknown [Medicago truncatula]
Length = 200
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 176/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKL+LK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|388512865|gb|AFK44494.1| unknown [Lotus japonicus]
Length = 200
Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/181 (93%), Positives = 177/181 (97%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKL+LK IALQARNAE+NPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLELKSIALQARNAEFNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEEQSRLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|3122941|sp|P93348.1|TBP_TOBAC RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|1498162|dbj|BAA13156.1| TATA binding protein (TBP) [Nicotiana tabacum]
Length = 200
Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 175/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQ SKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|217075458|gb|ACJ86089.1| unknown [Medicago truncatula]
gi|388502544|gb|AFK39338.1| unknown [Medicago truncatula]
gi|388506912|gb|AFK41522.1| unknown [Medicago truncatula]
Length = 200
Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 169/181 (93%), Positives = 175/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKL+LK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQN+VGSCDVKFPIRLEGLAYSHG
Sbjct: 80 VCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNVVGSCDVKFPIRLEGLAYSHGT 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDETYTAFENIYPVLTEFRK Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|297853252|ref|XP_002894507.1| hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp.
lyrata]
gi|297340349|gb|EFH70766.1| hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 168/181 (92%), Positives = 174/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 80 VCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAK+R+ETYTAFENIYPVLTEFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLTEFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|302758308|ref|XP_002962577.1| hypothetical protein SELMODRAFT_270329 [Selaginella moellendorffii]
gi|302824582|ref|XP_002993933.1| hypothetical protein SELMODRAFT_163230 [Selaginella moellendorffii]
gi|300138205|gb|EFJ04980.1| hypothetical protein SELMODRAFT_163230 [Selaginella moellendorffii]
gi|300169438|gb|EFJ36040.1| hypothetical protein SELMODRAFT_270329 [Selaginella moellendorffii]
Length = 199
Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 165/181 (91%), Positives = 174/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVN+DCKLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 19 GIIPTLQNIVSTVNMDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 78
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 79 VCTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGH 138
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDE Y AFENIYPVLTEFRK+Q
Sbjct: 139 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLTEFRKMQ 198
Query: 191 Q 191
Q
Sbjct: 199 Q 199
>gi|168052908|ref|XP_001778881.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
gi|162669750|gb|EDQ56331.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
Length = 200
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/181 (91%), Positives = 174/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVN+DC+LDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNIVSTVNMDCRLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGF A FKDFKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFQAHFKDFKIQNIVGSCDVKFPIRLEGLAYAHGH 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDE Y AFENIYPVLTEFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLTEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|168003287|ref|XP_001754344.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
gi|162694446|gb|EDQ80794.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
Length = 214
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/181 (90%), Positives = 174/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVN+DC+L+LK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNMDCRLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGH 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDE Y AFENIYPVLTEFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLTEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|15222732|ref|NP_175948.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|30695955|ref|NP_849812.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|135627|sp|P28148.1|TBP2_ARATH RecName: Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|16546|emb|CAA38742.1| transcription initiation factor II [Arabidopsis thaliana]
gi|4204264|gb|AAD10645.1| transcription initiation factor II [Arabidopsis thaliana]
gi|30102756|gb|AAP21296.1| At1g55520 [Arabidopsis thaliana]
gi|39545930|gb|AAR28028.1| TBP2 [Arabidopsis thaliana]
gi|110743161|dbj|BAE99472.1| transcription initiation factor TFIID-2 [Arabidopsis thaliana]
gi|225898024|dbj|BAH30344.1| hypothetical protein [Arabidopsis thaliana]
gi|332195136|gb|AEE33257.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|332195137|gb|AEE33258.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|227073|prf||1613452A transcription initiation factor TFIID-1
Length = 200
Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/181 (92%), Positives = 173/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 80 VCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAK+R+ETYTAFENIYPVL EFRKVQ
Sbjct: 140 FSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLREFRKVQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|15231241|ref|NP_187953.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|135626|sp|P28147.1|TBP1_ARATH RecName: Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit
gi|1943466|pdb|1VOK|A Chain A, Arabidopsis Thaliana Tbp (Dimer)
gi|1943467|pdb|1VOK|B Chain B, Arabidopsis Thaliana Tbp (Dimer)
gi|1943469|pdb|1VOL|B Chain B, Tfiib (Human Core Domain)TBP (A.THALIANA)TATA ELEMENT
Ternary Complex
gi|7245860|pdb|1QN5|A Chain A, Crystal Structure Of The G(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245861|pdb|1QN5|B Chain B, Crystal Structure Of The G(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245866|pdb|1QN6|A Chain A, Crystal Structure Of The T(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245867|pdb|1QN6|B Chain B, Crystal Structure Of The T(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245872|pdb|1QN7|A Chain A, Crystal Structure Of The T(-27) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245873|pdb|1QN7|B Chain B, Crystal Structure Of The T(-27) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245878|pdb|1QN8|A Chain A, Crystal Structure Of The T(-28) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245879|pdb|1QN8|B Chain B, Crystal Structure Of The T(-28) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245884|pdb|1QN9|A Chain A, Crystal Structure Of The C(-29) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245885|pdb|1QN9|B Chain B, Crystal Structure Of The C(-29) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245890|pdb|1QNA|A Chain A, Crystal Structure Of The T(-30) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245891|pdb|1QNA|B Chain B, Crystal Structure Of The T(-30) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245896|pdb|1QNB|A Chain A, Crystal Structure Of The T(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245897|pdb|1QNB|B Chain B, Crystal Structure Of The T(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245902|pdb|1QNC|A Chain A, Crystal Structure Of The A(-31) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245903|pdb|1QNC|B Chain B, Crystal Structure Of The A(-31) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245908|pdb|1QNE|A Chain A, Crystal Structure Of The Adenovirus Major Late Promoter
Tata Box Bound To Wild-Type Tbp (Arabidopsis Thaliana
Tbp Isoform 2).
gi|7245909|pdb|1QNE|B Chain B, Crystal Structure Of The Adenovirus Major Late Promoter
Tata Box Bound To Wild-Type Tbp (Arabidopsis Thaliana
Tbp Isoform 2).
gi|7245938|pdb|1QN3|A Chain A, Crystal Structure Of The C(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245939|pdb|1QN3|B Chain B, Crystal Structure Of The C(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7246010|pdb|1QN4|A Chain A, Crystal Structure Of The T(-24) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7246011|pdb|1QN4|B Chain B, Crystal Structure Of The T(-24) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|11692888|gb|AAG40047.1|AF324696_1 AT3g13445 [Arabidopsis thaliana]
gi|11935207|gb|AAG42019.1|AF327429_1 putative transcription initiation factor TFIID-1 [Arabidopsis
thaliana]
gi|13194816|gb|AAK15570.1|AF349523_1 putative TATA sequence-binding transcription initiation factor
protein [Arabidopsis thaliana]
gi|16548|emb|CAA38743.1| transcription initiation factor II [Arabidopsis thaliana]
gi|9280296|dbj|BAB01751.1| transcription initiation factor TFIID-1 (TATA-box factor 1) (TATA
sequence-binding protein 1) (TBP-1) [Arabidopsis
thaliana]
gi|15451056|gb|AAK96799.1| transcription initiation factor TFIID-1 (TATA-box factor 1) (TATA
sequence-binding protein 1) (TBP-1) [Arabidopsis
thaliana]
gi|18377408|gb|AAL66870.1| transcription initiation factor TFIID-1 [Arabidopsis thaliana]
gi|21537103|gb|AAM61444.1| transcription initiation factor TFIID-1 (TATA sequence-binding
protein 1) [Arabidopsis thaliana]
gi|39545928|gb|AAR28027.1| TBP1 [Arabidopsis thaliana]
gi|225898637|dbj|BAH30449.1| hypothetical protein [Arabidopsis thaliana]
gi|332641834|gb|AEE75355.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|227074|prf||1613452B transcription initiation factor TFIID-2
Length = 200
Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/181 (91%), Positives = 173/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 80 VCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAK+RDETY AFENIYPVL+EFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|339961162|pdb|1VTO|A Chain A, 1.9 A Resolution Refined Structure Of Tbp Recognizing The
Minor Groove Of Tataaaag
gi|339961163|pdb|1VTO|B Chain B, 1.9 A Resolution Refined Structure Of Tbp Recognizing The
Minor Groove Of Tataaaag
Length = 190
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/181 (91%), Positives = 173/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 10 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 69
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 70 VCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAA 129
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAK+RDETY AFENIYPVL+EFRK+Q
Sbjct: 130 FSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQ 189
Query: 191 Q 191
Q
Sbjct: 190 Q 190
>gi|326522452|dbj|BAK07688.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/181 (89%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNLDC+LDLK+IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 53 GIVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 112
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ SKLAARKYARI+QKLGFPA FKDFKIQNIV SCDVKFPIRLEGLAYSHGA
Sbjct: 113 VCTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGA 172
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLL+FVSGKIV+TGAKVRDE Y AFENIYPVLTE+RK Q
Sbjct: 173 FSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEYRKSQ 232
Query: 191 Q 191
Q
Sbjct: 233 Q 233
>gi|135641|sp|P26356.1|TBP1_WHEAT RecName: Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit
gi|21875|emb|CAA42531.1| TATA binding protein (TFIID) [Triticum aestivum]
Length = 233
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/181 (89%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNLDC+LDLK+IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 53 GIVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 112
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ SKLAARKYARI+QKLGFPA FKDFKIQNIV SCDVKFPIRLEGLAYSHGA
Sbjct: 113 VCTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGA 172
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLL+FVSGKIV+TGAKVRDE Y AFENIYPVLTE+RK Q
Sbjct: 173 FSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEYRKSQ 232
Query: 191 Q 191
Q
Sbjct: 233 Q 233
>gi|357146320|ref|XP_003573949.1| PREDICTED: TATA-box-binding protein 1-like [Brachypodium
distachyon]
Length = 235
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/181 (89%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNLDC+LDLK+IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 55 GIVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 114
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ SKLAARKYARI+QKLGFPA FKDFKIQNIV SCDVKFPIRLEGLAYSHGA
Sbjct: 115 VCTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGA 174
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLL+FVSGKIV+TGAKVRDE Y AFENIYPVLTE+RK Q
Sbjct: 175 FSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEYRKSQ 234
Query: 191 Q 191
Q
Sbjct: 235 Q 235
>gi|218184579|gb|EEC67006.1| hypothetical protein OsI_33717 [Oryza sativa Indica Group]
Length = 226
Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/181 (89%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDC+LDLKKIALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 44 GIVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 103
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 104 VCTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 163
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAK R E Y AFEN++PVLTE+RK Q
Sbjct: 164 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYRKTQ 223
Query: 191 Q 191
Q
Sbjct: 224 Q 224
>gi|125574885|gb|EAZ16169.1| hypothetical protein OsJ_31618 [Oryza sativa Japonica Group]
Length = 224
Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/181 (89%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDC+LDLKKIALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 42 GIVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 101
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 102 VCTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 161
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAK R E Y AFEN++PVLTE+RK Q
Sbjct: 162 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYRKTQ 221
Query: 191 Q 191
Q
Sbjct: 222 Q 222
>gi|115482150|ref|NP_001064668.1| Os10g0432300 [Oryza sativa Japonica Group]
gi|78708692|gb|ABB47667.1| TATA-box binding protein 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639277|dbj|BAF26582.1| Os10g0432300 [Oryza sativa Japonica Group]
Length = 223
Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 162/181 (89%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDC+LDLKKIALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 42 GIVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 101
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 102 VCTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 161
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAK R E Y AFEN++PVLTE+RK Q
Sbjct: 162 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYRKTQ 221
Query: 191 Q 191
Q
Sbjct: 222 Q 222
>gi|339961157|pdb|1VTL|E Chain E, Co-Crystal Structure Of Tbp Recognizing The Minor Groove
Of A Tata Element
gi|339961158|pdb|1VTL|F Chain F, Co-Crystal Structure Of Tbp Recognizing The Minor Groove
Of A Tata Element
Length = 186
Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/179 (91%), Positives = 171/179 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 8 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 67
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 68 VCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAA 127
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAK+RDETY AFENIYPVL+EFRK+
Sbjct: 128 FSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKI 186
>gi|297829888|ref|XP_002882826.1| transcription factor IID-1 [Arabidopsis lyrata subsp. lyrata]
gi|297328666|gb|EFH59085.1| transcription factor IID-1 [Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/181 (90%), Positives = 172/181 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SK+AARKYARI+QKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 80 VCTGAKSEYFSKMAARKYARIVQKLGFSAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAK+R+ETY AFENIYPVLTEFRK+Q
Sbjct: 140 FSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMREETYRAFENIYPVLTEFRKIQ 199
Query: 191 Q 191
Q
Sbjct: 200 Q 200
>gi|242034379|ref|XP_002464584.1| hypothetical protein SORBIDRAFT_01g021297 [Sorghum bicolor]
gi|241918438|gb|EER91582.1| hypothetical protein SORBIDRAFT_01g021297 [Sorghum bicolor]
Length = 218
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 159/181 (87%), Positives = 174/181 (96%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDC+LDLK IALQARNAEYNPKRFAAVIMRIREPKTTAL+FASGKM
Sbjct: 38 GIVPALQNIVSTVNLDCQLDLKMIALQARNAEYNPKRFAAVIMRIREPKTTALVFASGKM 97
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ SKLAARKYARI+QKLG+PAKFKDFKIQN+VGSCDVKFPIRLEGLA+SHGA
Sbjct: 98 VCTGAKSEEHSKLAARKYARIVQKLGYPAKFKDFKIQNMVGSCDVKFPIRLEGLAFSHGA 157
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FS+YEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAKVR+E YTAFENIYPVLTE+RK Q
Sbjct: 158 FSNYEPELFPGLIYRMKNPKIVLLIFVSGKIVLTGAKVREEIYTAFENIYPVLTEYRKCQ 217
Query: 191 Q 191
+
Sbjct: 218 K 218
>gi|302773061|ref|XP_002969948.1| hypothetical protein SELMODRAFT_16705 [Selaginella moellendorffii]
gi|302799318|ref|XP_002981418.1| hypothetical protein SELMODRAFT_37142 [Selaginella moellendorffii]
gi|300150958|gb|EFJ17606.1| hypothetical protein SELMODRAFT_37142 [Selaginella moellendorffii]
gi|300162459|gb|EFJ29072.1| hypothetical protein SELMODRAFT_16705 [Selaginella moellendorffii]
Length = 196
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/181 (85%), Positives = 170/181 (93%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVN+DCKL+LK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 16 GIVPTLQNIVATVNMDCKLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 75
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQ +LAARKYARIIQKLGFP++FKDFKIQNIVGSCDV+FPIRLEGLA+SHG
Sbjct: 76 VCTGAKSEQNCRLAARKYARIIQKLGFPSQFKDFKIQNIVGSCDVRFPIRLEGLAFSHGH 135
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FS+YEPE+FPGLIYRMKQPKIVLLIFVSGKIV+TGAKVRDE Y AFENIYPVL EFRK+
Sbjct: 136 FSTYEPEIFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLAEFRKIP 195
Query: 191 Q 191
Q
Sbjct: 196 Q 196
>gi|384501418|gb|EIE91909.1| TATA-box-binding protein [Rhizopus delemar RA 99-880]
Length = 239
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/182 (84%), Positives = 165/182 (90%)
Query: 7 YLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFA 66
Y + G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFA
Sbjct: 57 YAVAGITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFA 116
Query: 67 SGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAY 126
SGKMV TGAKSE SKLAARKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLAY
Sbjct: 117 SGKMVVTGAKSEDDSKLAARKYARIIQKLGFQAKFTDFKIQNIVGSCDIKFPIRLEGLAY 176
Query: 127 SHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
SHG FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AF+ IYPVLTEF
Sbjct: 177 SHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFQAIYPVLTEF 236
Query: 187 RK 188
RK
Sbjct: 237 RK 238
>gi|540193|gb|AAA79367.1| TATA binding protein [Pneumocystis carinii]
Length = 230
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/180 (85%), Positives = 165/180 (91%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 49 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 108
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 109 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSH 168
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+EFRK
Sbjct: 169 GTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEFRK 228
>gi|540195|gb|AAA79368.1| TATA binding protein [Pneumocystis wakefieldiae]
Length = 229
Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/180 (86%), Positives = 164/180 (91%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V S++NIV+TVNLDC+LDLK IALQ RNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 48 VSGIVPSLQNIVATVNLDCRLDLKTIALQRRNAEYNPKRFAAVIMRIREPKTTALIFASG 107
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 108 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSH 167
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL EFRK
Sbjct: 168 GTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLNEFRK 227
>gi|328768487|gb|EGF78533.1| Tata-Box binding protein ytbp [Batrachochytrium dendrobatidis
JAM81]
Length = 218
Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 154/178 (86%), Positives = 165/178 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 40 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 99
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 100 VVTGAKSEDNSKLASRKYARIIQKLGFQAKFTDFKIQNIVGSCDVKFPIRLEGLAYAHGH 159
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE+IYPVLTEFRK
Sbjct: 160 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFESIYPVLTEFRK 217
>gi|384500347|gb|EIE90838.1| TATA-box-binding protein [Rhizopus delemar RA 99-880]
Length = 248
Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 156/186 (83%), Positives = 164/186 (88%)
Query: 3 PYICYLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTA 62
PY I + +NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTA
Sbjct: 62 PYAVAGITPTLQVFRNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTA 121
Query: 63 LIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLE 122
LIFASGKMV TGAKSE SKLAARKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLE
Sbjct: 122 LIFASGKMVVTGAKSEDDSKLAARKYARIIQKLGFQAKFTDFKIQNIVGSCDVKFPIRLE 181
Query: 123 GLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPV 182
GLAYSHG FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AF+ IYPV
Sbjct: 182 GLAYSHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFQAIYPV 241
Query: 183 LTEFRK 188
LTEFRK
Sbjct: 242 LTEFRK 247
>gi|213401857|ref|XP_002171701.1| TATA-box-binding protein [Schizosaccharomyces japonicus yFS275]
gi|211999748|gb|EEB05408.1| TATA-box-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 231
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/180 (85%), Positives = 165/180 (91%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 51 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 110
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 111 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSH 170
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+EFRK
Sbjct: 171 GTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEFRK 230
>gi|344228428|gb|EGV60314.1| TBP-domain-containing protein [Candida tenuis ATCC 10573]
Length = 237
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/179 (86%), Positives = 164/179 (91%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
LG V +++NIV+TVNLDCKLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGK
Sbjct: 58 LGIVPTLQNIVATVNLDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 117
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 118 MVVTGAKSENDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 177
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 178 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 236
>gi|448112531|ref|XP_004202120.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
gi|448115084|ref|XP_004202744.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
gi|359383612|emb|CCE79528.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
gi|359465109|emb|CCE88814.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 315 bits (806), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 63 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 122
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 123 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 182
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 183 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 240
>gi|320582327|gb|EFW96544.1| TATA-binding protein, general transcription factor [Ogataea
parapolymorpha DL-1]
Length = 246
Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+L+LK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 68 GIVPTLQNIVATVNLDCRLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 127
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLAARKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 128 VVTGAKSEDDSKLAARKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYAHGT 187
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 188 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYKAFEAIYPVLSEFRK 245
>gi|45201230|ref|NP_986800.1| AGR134Wp [Ashbya gossypii ATCC 10895]
gi|44986084|gb|AAS54624.1| AGR134Wp [Ashbya gossypii ATCC 10895]
gi|374110049|gb|AEY98954.1| FAGR134Wp [Ashbya gossypii FDAG1]
Length = 239
Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 164/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 61 GIVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 120
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 121 VVTGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 180
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 181 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKL 239
>gi|385301759|gb|EIF45927.1| tata-box binding protein [Dekkera bruxellensis AWRI1499]
Length = 259
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+L+LK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 81 GIVPTLQNIVATVNLDCRLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 140
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLAARKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 141 VVTGAKSEDDSKLAARKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYAHGT 200
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 201 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYKAFEAIYPVLSEFRK 258
>gi|358060360|dbj|GAA93765.1| hypothetical protein E5Q_00411 [Mixia osmundae IAM 14324]
Length = 367
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 150/180 (83%), Positives = 167/180 (92%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+CKLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 187 VHGLVPTLQNIVATVNLECKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 246
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF A+FK+FKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 247 KMVVTGAKSEDDSRLASRKYARIIQKLGFEAQFKEFKIQNIVGSCDVKFPIRLEGLAYSH 306
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y+AF+ IYPVL+EFRK
Sbjct: 307 GHFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYSAFQLIYPVLSEFRK 366
>gi|260941770|ref|XP_002615051.1| TATA-box binding protein [Clavispora lusitaniae ATCC 42720]
gi|238851474|gb|EEQ40938.1| TATA-box binding protein [Clavispora lusitaniae ATCC 42720]
Length = 237
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 59 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 118
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 119 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 178
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 179 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 236
>gi|294659650|ref|XP_002770623.1| DEHA2G11836p [Debaryomyces hansenii CBS767]
gi|199434124|emb|CAR65957.1| DEHA2G11836p [Debaryomyces hansenii CBS767]
Length = 243
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 65 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 124
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 125 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 184
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 185 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 242
>gi|135634|sp|P26354.1|TBP_ACACA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|5593|emb|CAA44843.1| TFIID [Acanthamoeba castellanii]
gi|155636|gb|AAA27712.1| transcription factor [Acanthamoeba castellanii]
gi|155638|gb|AAA27713.1| TFIID [Acanthamoeba castellanii]
gi|440795312|gb|ELR16441.1| TATAbox-binding protein [Acanthamoeba castellanii str. Neff]
Length = 258
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/179 (84%), Positives = 164/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 80 GIVPTLQNIVSTVNLGCKLDLKNIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 139
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGF AKF DFKIQNIVGSCDV+FPIRLEGLA++H
Sbjct: 140 VCTGAKSEEASRLAARKYARIIQKLGFAAKFLDFKIQNIVGSCDVRFPIRLEGLAFAHNH 199
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
+ SYEPELFPGLIYRM QPKIVLLIFVSGKIV+TGAKVR+E Y AFENIYPVLTE++K
Sbjct: 200 YCSYEPELFPGLIYRMVQPKIVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLTEYKKT 258
>gi|254566373|ref|XP_002490297.1| TATA-binding protein, general transcription factor [Komagataella
pastoris GS115]
gi|238030093|emb|CAY68016.1| TATA-binding protein, general transcription factor [Komagataella
pastoris GS115]
gi|328350692|emb|CCA37092.1| TATA-box-binding protein [Komagataella pastoris CBS 7435]
Length = 243
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 65 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 124
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 125 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGH 184
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 185 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYQAFEAIYPVLSEFRK 242
>gi|126274078|ref|XP_001387406.1| TATA-binding protein [Scheffersomyces stipitis CBS 6054]
gi|126213276|gb|EAZ63383.1| TATA-binding protein [Scheffersomyces stipitis CBS 6054]
Length = 247
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 164/178 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 69 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 128
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 129 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 188
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE+IYPVL+EFRK
Sbjct: 189 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFESIYPVLSEFRK 246
>gi|149248310|ref|XP_001528542.1| TATA-box binding protein [Lodderomyces elongisporus NRRL YB-4239]
gi|146448496|gb|EDK42884.1| TATA-box binding protein [Lodderomyces elongisporus NRRL YB-4239]
Length = 248
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 70 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 129
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 130 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 189
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 190 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 247
>gi|50308801|ref|XP_454405.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643540|emb|CAG99492.1| KLLA0E10099p [Kluyveromyces lactis]
Length = 233
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 164/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIV+TVNLDC+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 55 GIIPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 114
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 115 VVTGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 174
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 175 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKL 233
>gi|448513790|ref|XP_003867010.1| Tbp1 transcription initiation factor [Candida orthopsilosis Co
90-125]
gi|380351348|emb|CCG21572.1| Tbp1 transcription initiation factor [Candida orthopsilosis Co
90-125]
Length = 251
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 73 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 132
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 133 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 192
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 193 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 250
>gi|406607792|emb|CCH40897.1| TATA-box-binding protein [Wickerhamomyces ciferrii]
Length = 238
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/179 (84%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 60 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 119
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 120 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGP 179
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL EFRK+
Sbjct: 180 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLNEFRKL 238
>gi|383858146|ref|XP_003704563.1| PREDICTED: TATA-box-binding protein-like [Megachile rotundata]
Length = 318
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 140 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 199
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 200 VCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 259
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 260 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 317
>gi|50547559|ref|XP_501249.1| YALI0B23056p [Yarrowia lipolytica]
gi|49647115|emb|CAG83502.1| YALI0B23056p [Yarrowia lipolytica CLIB122]
Length = 227
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/180 (83%), Positives = 163/180 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 47 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 106
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGA+SE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SH
Sbjct: 107 KMVVTGARSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSH 166
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL EFRK
Sbjct: 167 GTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLNEFRK 226
>gi|146415198|ref|XP_001483569.1| TATA-box binding protein [Meyerozyma guilliermondii ATCC 6260]
gi|146392042|gb|EDK40200.1| TATA-box binding protein [Meyerozyma guilliermondii ATCC 6260]
Length = 240
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSG+IV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGRIVLTGAKQREEIYDAFEAIYPVLSEFRK 239
>gi|380027888|ref|XP_003697647.1| PREDICTED: TATA-box-binding protein-like [Apis florea]
Length = 319
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 141 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 200
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 201 VCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 260
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 261 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 318
>gi|354546879|emb|CCE43611.1| hypothetical protein CPAR2_212550 [Candida parapsilosis]
Length = 259
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 81 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 140
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 141 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 200
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 201 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 258
>gi|344305038|gb|EGW35270.1| hypothetical protein SPAPADRAFT_58486 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 68 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 127
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 128 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 187
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK
Sbjct: 188 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 245
>gi|19115478|ref|NP_594566.1| TATA-binding protein (TBP) [Schizosaccharomyces pombe 972h-]
gi|135639|sp|P17871.1|TBP_SCHPO RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|295936|emb|CAA37494.1| TFIID [Schizosaccharomyces pombe]
gi|1044934|emb|CAA91430.1| transcription initiation factor tfiid [Schizosaccharomyces pombe]
gi|6723895|emb|CAB66471.1| TATA-binding protein (TBP) [Schizosaccharomyces pombe]
gi|226987|prf||1612348A transcription factor IID
Length = 231
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/180 (83%), Positives = 163/180 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPK+TALIFASG
Sbjct: 51 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASG 110
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV G KSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 111 KMVVLGGKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSH 170
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+EFRK
Sbjct: 171 GTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEFRK 230
>gi|307204782|gb|EFN83340.1| TATA-box-binding protein [Harpegnathos saltator]
Length = 304
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 126 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 185
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL SHG
Sbjct: 186 VCTGAKSEADSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLSHGQ 245
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 246 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRKEIYEAFDNIYPILKSFKK 303
>gi|363753780|ref|XP_003647106.1| hypothetical protein Ecym_5549 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890742|gb|AET40289.1| hypothetical protein Ecym_5549 [Eremothecium cymbalariae
DBVPG#7215]
Length = 239
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 164/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 61 GIVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 120
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 121 VVTGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 180
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 181 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKL 239
>gi|66536790|ref|XP_623088.1| PREDICTED: TATA-box-binding protein-like isoform 1 [Apis mellifera]
Length = 319
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 141 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 200
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 201 VCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 260
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 261 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 318
>gi|332374462|gb|AEE62372.1| unknown [Dendroctonus ponderosae]
Length = 318
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 140 GIVPQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 199
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H +
Sbjct: 200 VCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSS 259
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 260 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 317
>gi|156392660|ref|XP_001636166.1| predicted protein [Nematostella vectensis]
gi|156223266|gb|EDO44103.1| predicted protein [Nematostella vectensis]
Length = 194
Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 164/178 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL CKLDLKKIALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 16 GILPQLQNIVSTVNLGCKLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 75
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QSKLAARKYAR++QKLGFPAKF +FKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 76 VCTGAKSEEQSKLAARKYARVVQKLGFPAKFTEFKIQNMVGSCDVKFPIRLEGLVLAHGQ 135
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 136 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKTFRK 193
>gi|328856236|gb|EGG05358.1| hypothetical protein MELLADRAFT_75016 [Melampsora larici-populina
98AG31]
Length = 233
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 149/180 (82%), Positives = 165/180 (91%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+C+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 53 VQGIVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 112
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LAARKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAY+H
Sbjct: 113 KMVVTGAKSEDDSRLAARKYARIVQKLGFEAKFTEFKIQNIVGSCDVKFPIRLEGLAYNH 172
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF NIYPVL+EFRK
Sbjct: 173 GHFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNNIYPVLSEFRK 232
>gi|322801294|gb|EFZ21981.1| hypothetical protein SINV_10030 [Solenopsis invicta]
Length = 306
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 128 GILPQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 187
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL SHG
Sbjct: 188 VCTGAKSEGDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLSHGQ 247
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 248 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRTEIYEAFDNIYPILKSFKK 305
>gi|340727525|ref|XP_003402092.1| PREDICTED: TATA-box-binding protein-like [Bombus terrestris]
gi|350422935|ref|XP_003493334.1| PREDICTED: TATA-box-binding protein-like [Bombus impatiens]
Length = 314
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 145/176 (82%), Positives = 162/176 (92%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 138 LPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 197
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +HG FS
Sbjct: 198 TGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFS 257
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 258 SYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 313
>gi|307182447|gb|EFN69682.1| TATA-box-binding protein [Camponotus floridanus]
Length = 305
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 127 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 186
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL SHG
Sbjct: 187 VCTGAKSEGDSRLAARKYARIIQKLGFPAKFIDFKIQNMVGSCDVKFPIRLEGLVLSHGQ 246
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK+R E Y AF+NIYP+L F+K
Sbjct: 247 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRKEIYEAFDNIYPILKSFKK 304
>gi|332021125|gb|EGI61512.1| TATA-box-binding protein [Acromyrmex echinatior]
Length = 305
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 127 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 186
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL SHG
Sbjct: 187 VCTGAKSEGDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLSHGQ 246
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK+R E Y AF+NIYP+L F+K
Sbjct: 247 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRKEIYEAFDNIYPILKSFKK 304
>gi|366987133|ref|XP_003673333.1| hypothetical protein NCAS_0A03870 [Naumovozyma castellii CBS 4309]
gi|342299196|emb|CCC66945.1| hypothetical protein NCAS_0A03870 [Naumovozyma castellii CBS 4309]
Length = 252
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 74 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 133
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 134 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 193
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 194 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 252
>gi|255719850|ref|XP_002556205.1| KLTH0H07502p [Lachancea thermotolerans]
gi|238942171|emb|CAR30343.1| KLTH0H07502p [Lachancea thermotolerans CBS 6340]
Length = 230
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 52 GIVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 111
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V GAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 112 VVIGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 171
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 172 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKL 230
>gi|169854094|ref|XP_001833724.1| transcription initiation factor TFIID-1 [Coprinopsis cinerea
okayama7#130]
gi|116505191|gb|EAU88086.1| transcription initiation factor TFIID-1 [Coprinopsis cinerea
okayama7#130]
Length = 308
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 130 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 189
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 190 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 249
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 250 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 307
>gi|112983068|ref|NP_001037059.1| TATA-box-binding protein [Bombyx mori]
gi|14423945|sp|O45211.1|TBP_BOMMO RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|3326928|emb|CAA11000.1| TBP [Bombyx mori]
Length = 307
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNLDCKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 189 VCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 248
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR+E Y AF+NIYP+L F+K
Sbjct: 249 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKK 306
>gi|315055559|ref|XP_003177154.1| TATA-box-binding protein [Arthroderma gypseum CBS 118893]
gi|311339000|gb|EFQ98202.1| TATA-box-binding protein [Arthroderma gypseum CBS 118893]
Length = 257
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 77 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 136
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 196
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 197 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 256
Query: 189 V 189
V
Sbjct: 257 V 257
>gi|303317340|ref|XP_003068672.1| TATA-box-binding protein, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108353|gb|EER26527.1| TATA-box-binding protein, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038620|gb|EFW20555.1| TATA-box binding protein [Coccidioides posadasii str. Silveira]
Length = 252
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 72 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 131
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 132 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 191
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 192 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 251
Query: 189 V 189
V
Sbjct: 252 V 252
>gi|156846828|ref|XP_001646300.1| hypothetical protein Kpol_1032p36 [Vanderwaltozyma polyspora DSM
70294]
gi|156116975|gb|EDO18442.1| hypothetical protein Kpol_1032p36 [Vanderwaltozyma polyspora DSM
70294]
Length = 251
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 73 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 132
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 133 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 192
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 193 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 251
>gi|225681638|gb|EEH19922.1| TATA-box-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226288778|gb|EEH44290.1| TATA-box-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 265
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 85 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 144
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 145 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 204
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 205 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 264
Query: 189 V 189
V
Sbjct: 265 V 265
>gi|392573053|gb|EIW66195.1| hypothetical protein TREMEDRAFT_41045 [Tremella mesenterica DSM
1558]
Length = 255
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/182 (82%), Positives = 165/182 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+C+LDLK IAL ARNAEYNPKRFAAV+MRIREPKTTALIFASG
Sbjct: 71 VQGLVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVVMRIREPKTTALIFASG 130
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 131 KMVVTGAKSEDDSRLASRKYARIIQKLGFDAKFAEFKIQNIVGSCDVKFPIRLEGLAYSH 190
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
GAFSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF IY VLTEFRK
Sbjct: 191 GAFSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYMAFNQIYAVLTEFRK 250
Query: 189 VQ 190
Q
Sbjct: 251 DQ 252
>gi|295670940|ref|XP_002796017.1| TATA-box-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284150|gb|EEH39716.1| TATA-box-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 265
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 85 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 144
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 145 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 204
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 205 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 264
Query: 189 V 189
V
Sbjct: 265 V 265
>gi|410076168|ref|XP_003955666.1| hypothetical protein KAFR_0B02330 [Kazachstania africana CBS 2517]
gi|372462249|emb|CCF56531.1| hypothetical protein KAFR_0B02330 [Kazachstania africana CBS 2517]
Length = 230
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 52 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 111
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 112 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 171
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 172 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 230
>gi|225556591|gb|EEH04879.1| transcription initiation factor TFIID-2 [Ajellomyces capsulatus
G186AR]
gi|240273705|gb|EER37225.1| TATA-binding protein [Ajellomyces capsulatus H143]
gi|325087599|gb|EGC40909.1| transcription initiation factor TFIID-2 [Ajellomyces capsulatus
H88]
Length = 262
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 82 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 141
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 142 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 201
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 202 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 261
Query: 189 V 189
V
Sbjct: 262 V 262
>gi|3122948|sp|Q92146.1|TBP_TRIGA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|808897|dbj|BAA06554.1| TATA-box binding protein [Trimeresurus gramineus]
gi|1483197|dbj|BAA06560.1| TATA-box binding protein [Trimeresurus gramineus]
Length = 302
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 301
>gi|3122947|sp|Q92117.1|TBP_TRIFL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|1483195|dbj|BAA06555.1| TATA-box binding protein [Trimeresurus flavoviridis]
Length = 300
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 121 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 180
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 181 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 240
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 241 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 299
>gi|326471025|gb|EGD95034.1| TATA-box-binding protein [Trichophyton tonsurans CBS 112818]
Length = 257
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 77 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 136
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 196
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 197 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 256
Query: 189 V 189
V
Sbjct: 257 V 257
>gi|327262117|ref|XP_003215872.1| PREDICTED: TATA-box-binding protein-like [Anolis carolinensis]
Length = 300
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 121 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 180
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 181 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 240
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 241 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 299
>gi|392596142|gb|EIW85465.1| TBP-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 295
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 117 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 176
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 177 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 236
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 237 FSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 294
>gi|296824240|ref|XP_002850621.1| TATA-box-binding protein [Arthroderma otae CBS 113480]
gi|238838175|gb|EEQ27837.1| TATA-box-binding protein [Arthroderma otae CBS 113480]
Length = 266
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 86 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 145
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 146 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 205
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 206 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 265
Query: 189 V 189
V
Sbjct: 266 V 266
>gi|392870835|gb|EAS32669.2| TATA-box-binding protein [Coccidioides immitis RS]
Length = 299
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 119 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 178
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 179 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 238
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT+FRK
Sbjct: 239 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDFRK 298
Query: 189 V 189
V
Sbjct: 299 V 299
>gi|1729912|sp|P53361.1|TBP_SPOFR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|349117|gb|AAA62394.1| DNA-binding protein [Spodoptera frugiperda]
Length = 307
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GIVPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 189 VCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 248
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR+E Y AF+NIYP+L F+K
Sbjct: 249 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKK 306
>gi|444316966|ref|XP_004179140.1| hypothetical protein TBLA_0B08050 [Tetrapisispora blattae CBS 6284]
gi|387512180|emb|CCH59621.1| hypothetical protein TBLA_0B08050 [Tetrapisispora blattae CBS 6284]
Length = 242
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 64 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 123
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 124 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 183
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 184 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 242
>gi|291241110|ref|XP_002740460.1| PREDICTED: TATA box binding protein-like [Saccoglossus kowalevskii]
Length = 293
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 114 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 173
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYAR+IQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 174 VCTGAKSEDFSRLAARKYARVIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 233
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L F+K+
Sbjct: 234 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRKEIYEAFENIYPILKAFKKM 292
>gi|409082748|gb|EKM83106.1| hypothetical protein AGABI1DRAFT_111611 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 306
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/180 (82%), Positives = 163/180 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASG
Sbjct: 126 VEGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASG 185
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSH
Sbjct: 186 KMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSH 245
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 246 GQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 305
>gi|254586113|ref|XP_002498624.1| ZYRO0G14806p [Zygosaccharomyces rouxii]
gi|238941518|emb|CAR29691.1| ZYRO0G14806p [Zygosaccharomyces rouxii]
Length = 239
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 61 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 120
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 121 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 180
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 181 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 239
>gi|291190590|ref|NP_001167145.1| TATA-box-binding protein [Salmo salar]
gi|223648344|gb|ACN10930.1| TATA-box-binding protein [Salmo salar]
Length = 299
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 120 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 179
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 180 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 239
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 240 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 298
>gi|365987133|ref|XP_003670398.1| hypothetical protein NDAI_0E03380 [Naumovozyma dairenensis CBS 421]
gi|343769168|emb|CCD25155.1| hypothetical protein NDAI_0E03380 [Naumovozyma dairenensis CBS 421]
Length = 264
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 86 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 145
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 146 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 205
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 206 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 264
>gi|2052377|gb|AAB53097.1| transcription factor IID [Mus musculus domesticus]
Length = 318
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 139 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 198
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 199 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 258
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 259 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 317
>gi|172073171|ref|NP_038712.3| TATA-box-binding protein [Mus musculus]
gi|135638|sp|P29037.1|TBP_MOUSE RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|220612|dbj|BAA00840.1| TFIID [Mus musculus]
gi|15215158|gb|AAH12685.1| Tbp protein [Mus musculus]
gi|39754750|gb|AAR30866.1| TATA-binding protein [Mus musculus]
gi|148688512|gb|EDL20459.1| TATA box binding protein, isoform CRA_a [Mus musculus]
gi|148688514|gb|EDL20461.1| TATA box binding protein, isoform CRA_a [Mus musculus]
Length = 316
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 197 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 256
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 257 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 315
>gi|426235063|ref|XP_004011510.1| PREDICTED: TATA-box-binding protein isoform 3 [Ovis aries]
Length = 288
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 109 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 168
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 169 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 228
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 229 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 287
>gi|1729911|sp|P53360.1|TBP_MESAU RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|493654|dbj|BAA06287.1| TBP [Mesocricetus auratus]
Length = 318
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 139 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 198
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 199 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 258
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 259 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 317
>gi|126310795|ref|XP_001371815.1| PREDICTED: TATA-box-binding protein-like isoform 1 [Monodelphis
domestica]
Length = 308
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 189 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 248
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 249 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 307
>gi|432114953|gb|ELK36596.1| TATA-box-binding protein [Myotis davidii]
Length = 316
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 197 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 256
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 257 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 315
>gi|51948368|ref|NP_001004198.1| TATA-box-binding protein [Rattus norvegicus]
gi|51858685|gb|AAH81939.1| TATA box binding protein [Rattus norvegicus]
gi|149047096|gb|EDL99816.1| TATA box binding protein, isoform CRA_a [Rattus norvegicus]
gi|149047097|gb|EDL99817.1| TATA box binding protein, isoform CRA_a [Rattus norvegicus]
Length = 318
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 139 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 198
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 199 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 258
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 259 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 317
>gi|50290217|ref|XP_447540.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526850|emb|CAG60477.1| unnamed protein product [Candida glabrata]
Length = 233
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 55 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 114
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 115 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 174
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 175 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 233
>gi|402868787|ref|XP_003898469.1| PREDICTED: TATA-box-binding protein isoform 1 [Papio anubis]
Length = 335
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 156 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 215
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 216 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 275
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 276 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 334
>gi|346470907|gb|AEO35298.1| hypothetical protein [Amblyomma maculatum]
Length = 309
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 131 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 190
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYARIIQKLGF AKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 191 VCTGAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQ 250
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 251 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGFRK 308
>gi|148688513|gb|EDL20460.1| TATA box binding protein, isoform CRA_b [Mus musculus]
Length = 323
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 144 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 203
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 204 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 263
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 264 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 322
>gi|395839043|ref|XP_003792412.1| PREDICTED: TATA-box-binding protein [Otolemur garnettii]
Length = 326
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 147 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 206
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 207 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 266
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 267 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 325
>gi|402868789|ref|XP_003898470.1| PREDICTED: TATA-box-binding protein isoform 2 [Papio anubis]
Length = 325
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 146 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 205
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 206 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 265
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 266 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 324
>gi|355723497|gb|AES07910.1| TATA-box binding protein [Mustela putorius furo]
Length = 315
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 197 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 256
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 257 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 315
>gi|296414351|ref|XP_002836865.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632706|emb|CAZ81056.1| unnamed protein product [Tuber melanosporum]
Length = 253
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/181 (82%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 73 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 132
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 133 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 192
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE+IYPVL +FRK
Sbjct: 193 HHFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYIAFESIYPVLNDFRK 252
Query: 189 V 189
V
Sbjct: 253 V 253
>gi|170093960|ref|XP_001878201.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646655|gb|EDR10900.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 189
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 11 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 71 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 130
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 131 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 188
>gi|355562211|gb|EHH18843.1| hypothetical protein EGK_15529 [Macaca mulatta]
Length = 326
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 147 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 206
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 207 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 266
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 267 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 325
>gi|348561403|ref|XP_003466502.1| PREDICTED: TATA-box-binding protein-like [Cavia porcellus]
Length = 321
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 142 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 201
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 202 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 261
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 262 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 320
>gi|224047784|ref|XP_002190631.1| PREDICTED: TATA-box-binding protein [Taeniopygia guttata]
Length = 302
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 301
>gi|80474966|gb|AAI09055.1| TBP protein [Homo sapiens]
gi|190691993|gb|ACE87771.1| TATA box binding protein protein [synthetic construct]
gi|254071353|gb|ACT64436.1| TATA box binding protein protein [synthetic construct]
Length = 288
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 109 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 168
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 169 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 228
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 229 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 287
>gi|384245994|gb|EIE19486.1| TBP-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 163/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDCKLDLK IA +ARNAEYNPKRFAAVIMRIR+PKTTAL+FASGKM
Sbjct: 25 GIVPTLQNIVATVNLDCKLDLKTIAQKARNAEYNPKRFAAVIMRIRDPKTTALVFASGKM 84
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ ++ AARKYA+IIQKL FPA FKDFKIQNIVGSCDVKFPIRLEGL YSHG
Sbjct: 85 VCTGAKSEEHARTAARKYAKIIQKLDFPATFKDFKIQNIVGSCDVKFPIRLEGLNYSHGM 144
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRMK+PK+VLLIFVSGK+V+TG K R++ Y AFE+IYPVL EFRK
Sbjct: 145 FSSYEPELFPGLIYRMKEPKVVLLIFVSGKVVLTGGKKREDIYEAFESIYPVLQEFRK 202
>gi|427788157|gb|JAA59530.1| Putative tata-box-binding protein [Rhipicephalus pulchellus]
Length = 308
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 130 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 189
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYARIIQKLGF AKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 190 VCTGAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQ 249
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 250 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGFRK 307
>gi|344306713|ref|XP_003422029.1| PREDICTED: TATA-box-binding protein-like [Loxodonta africana]
Length = 324
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 145 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 204
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 205 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 264
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 265 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 323
>gi|41056135|ref|NP_956390.1| TATA-box-binding protein [Danio rerio]
gi|82187626|sp|Q7SXL3.1|TBP_DANRE RecName: Full=TATA-box-binding protein; Short=zTBP; AltName:
Full=TATA sequence-binding protein; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
Short=zfTBF; AltName: Full=Transcription initiation
factor TFIID TBP subunit
gi|33416871|gb|AAH55549.1| TATA box binding protein [Danio rerio]
gi|37727187|gb|AAO34524.1| TATA-binding protein [Danio rerio]
gi|41351472|gb|AAH65860.1| TATA box binding protein [Danio rerio]
Length = 302
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 301
>gi|426235061|ref|XP_004011509.1| PREDICTED: TATA-box-binding protein isoform 2 [Ovis aries]
Length = 306
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 127 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 186
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 187 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 246
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 247 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 305
>gi|426235059|ref|XP_004011508.1| PREDICTED: TATA-box-binding protein isoform 1 [Ovis aries]
Length = 314
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 135 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 194
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 195 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 254
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 255 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 313
>gi|54696180|gb|AAV38462.1| TATA box binding protein [synthetic construct]
Length = 337
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 157 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 216
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 217 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 276
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 277 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 335
>gi|45384144|ref|NP_990434.1| TATA-box-binding protein [Gallus gallus]
gi|3122919|sp|O13270.1|TBP_CHICK RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|2145309|dbj|BAA20296.1| TBP0 [Gallus gallus]
gi|2145310|dbj|BAA20297.1| TBP1 [Gallus gallus]
gi|2145320|dbj|BAA20298.1| TBP [Gallus gallus]
Length = 302
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 301
>gi|326915583|ref|XP_003204094.1| PREDICTED: TATA-box-binding protein-like [Meleagris gallopavo]
Length = 303
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 124 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 183
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 184 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 243
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 244 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 302
>gi|38680348|gb|AAR26545.1| TATA-binding protein [Gallus gallus]
Length = 302
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 301
>gi|255936921|ref|XP_002559487.1| Pc13g10670 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584107|emb|CAP92136.1| Pc13g10670 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 265
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 87 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 146
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 147 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 206
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 207 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 265
>gi|432852539|ref|XP_004067298.1| PREDICTED: TATA-box-binding protein [Oryzias latipes]
Length = 305
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 126 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 185
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 186 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 245
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 246 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 304
>gi|389749066|gb|EIM90243.1| TBP-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 301
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 123 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 183 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLVEFRK 300
>gi|425767263|gb|EKV05837.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Penicillium digitatum PHI26]
gi|425780061|gb|EKV18083.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Penicillium digitatum Pd1]
Length = 263
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 85 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 144
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 145 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 204
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 205 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 263
>gi|291414592|ref|XP_002723543.1| PREDICTED: TATA box binding protein [Oryctolagus cuniculus]
Length = 323
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 144 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 203
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 204 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 263
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 264 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 322
>gi|297679683|ref|XP_002817654.1| PREDICTED: TATA-box-binding protein [Pongo abelii]
Length = 327
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 148 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 207
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 208 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 267
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 268 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 326
>gi|29477183|gb|AAH50136.1| Tbp protein [Mus musculus]
Length = 316
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPRLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 197 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 256
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 257 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 315
>gi|426355237|ref|XP_004045035.1| PREDICTED: TATA-box-binding protein isoform 1 [Gorilla gorilla
gorilla]
Length = 331
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 152 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 211
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 212 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 271
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 272 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 330
>gi|80478871|gb|AAI09054.1| TATA box binding protein [Homo sapiens]
gi|82571689|gb|AAI10342.1| TATA box binding protein [Homo sapiens]
gi|119567803|gb|EAW47418.1| TATA box binding protein, isoform CRA_a [Homo sapiens]
gi|119567804|gb|EAW47419.1| TATA box binding protein, isoform CRA_a [Homo sapiens]
gi|190689691|gb|ACE86620.1| TATA box binding protein protein [synthetic construct]
gi|190691053|gb|ACE87301.1| TATA box binding protein protein [synthetic construct]
Length = 338
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 159 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 218
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 219 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 278
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 279 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 337
>gi|37066|emb|CAA38736.1| TFIID [Homo sapiens]
gi|227072|prf||1613451A TATA binding factor TFIID
Length = 335
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 156 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 215
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 216 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 275
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 276 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 334
>gi|4507379|ref|NP_003185.1| TATA-box-binding protein isoform 1 [Homo sapiens]
gi|1351223|sp|P20226.2|TBP_HUMAN RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|339492|gb|AAA36731.1| TATA-box binding protein [Homo sapiens]
gi|48145669|emb|CAG33057.1| TBP [Homo sapiens]
Length = 339
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 160 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 219
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 220 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 279
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 280 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 338
>gi|397502104|ref|XP_003821708.1| PREDICTED: TATA-box-binding protein isoform 1 [Pan paniscus]
Length = 332
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 153 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 212
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 213 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 272
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 273 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 331
>gi|332264009|ref|XP_003281041.1| PREDICTED: TATA-box-binding protein [Nomascus leucogenys]
Length = 328
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 149 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 208
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 209 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 268
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 269 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 327
>gi|296199650|ref|XP_002747248.1| PREDICTED: TATA-box-binding protein [Callithrix jacchus]
Length = 333
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 154 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 213
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 214 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 273
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 274 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 332
>gi|194390034|dbj|BAG60533.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 197 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 256
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 257 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 315
>gi|149743967|ref|XP_001499379.1| PREDICTED: TATA-box-binding protein-like isoform 1 [Equus caballus]
Length = 329
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 150 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 209
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 210 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 269
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 270 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 328
>gi|403216725|emb|CCK71221.1| hypothetical protein KNAG_0G01630 [Kazachstania naganishii CBS
8797]
Length = 255
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNP+RFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPRRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 197 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 255
>gi|17298076|dbj|BAB78512.1| TATA-box binding protein [Oryzias latipes]
Length = 320
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 141 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 200
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 201 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 260
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 261 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 319
>gi|348534076|ref|XP_003454529.1| PREDICTED: TATA-box-binding protein-like [Oreochromis niloticus]
Length = 333
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 154 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 213
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 214 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 273
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 274 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 332
>gi|115496234|ref|NP_001069210.1| TATA-box-binding protein [Bos taurus]
gi|119367391|sp|Q2HJ52.1|TBP_BOVIN RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|87578225|gb|AAI13309.1| TATA box binding protein [Bos taurus]
Length = 319
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 140 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 199
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 200 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 259
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 260 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 318
>gi|1582692|prf||2119243A TATA box-binding protein
Length = 338
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 159 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 218
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 219 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 278
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 279 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 337
>gi|301779702|ref|XP_002925261.1| PREDICTED: TATA-box-binding protein-like [Ailuropoda melanoleuca]
Length = 324
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 145 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 204
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 205 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 264
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 265 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 323
>gi|73973822|ref|XP_854525.1| PREDICTED: TATA-box-binding protein isoform 1 [Canis lupus
familiaris]
Length = 324
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 145 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 204
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 205 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 264
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 265 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 323
>gi|440894479|gb|ELR46921.1| TATA-box-binding protein [Bos grunniens mutus]
Length = 312
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 133 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 192
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 193 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 252
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 253 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 311
>gi|336367903|gb|EGN96247.1| hypothetical protein SERLA73DRAFT_76226 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380633|gb|EGO21786.1| hypothetical protein SERLADRAFT_410307 [Serpula lacrymans var.
lacrymans S7.9]
Length = 306
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 128 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 187
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 188 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 247
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 248 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 305
>gi|147906485|ref|NP_001089038.1| TATA box binding protein [Xenopus laevis]
gi|57032530|gb|AAH88819.1| LOC503680 protein [Xenopus laevis]
Length = 296
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 117 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 176
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 177 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 236
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 237 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 295
>gi|109073359|ref|XP_001085368.1| PREDICTED: TATA-box-binding protein isoform 3 [Macaca mulatta]
gi|75075688|sp|Q4R4F5.1|TBP_MACFA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|67968013|dbj|BAE00488.1| unnamed protein product [Macaca fascicularis]
gi|67971336|dbj|BAE02010.1| unnamed protein product [Macaca fascicularis]
gi|355749048|gb|EHH53531.1| hypothetical protein EGM_14191 [Macaca fascicularis]
Length = 326
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 147 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 206
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 207 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 266
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 267 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 325
>gi|403305888|ref|XP_003943481.1| PREDICTED: TATA-box-binding protein [Saimiri boliviensis
boliviensis]
Length = 326
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 147 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 206
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 207 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 266
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 267 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 325
>gi|426355239|ref|XP_004045036.1| PREDICTED: TATA-box-binding protein isoform 2 [Gorilla gorilla
gorilla]
Length = 311
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 132 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 191
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 192 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 251
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 252 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 310
>gi|397502106|ref|XP_003821709.1| PREDICTED: TATA-box-binding protein isoform 2 [Pan paniscus]
Length = 312
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 133 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 192
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 193 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 252
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 253 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 311
>gi|285026520|ref|NP_001165556.1| TATA-box-binding protein isoform 2 [Homo sapiens]
Length = 319
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 140 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 199
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 200 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 259
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 260 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 318
>gi|366997981|ref|XP_003683727.1| hypothetical protein TPHA_0A02110 [Tetrapisispora phaffii CBS 4417]
gi|357522022|emb|CCE61293.1| hypothetical protein TPHA_0A02110 [Tetrapisispora phaffii CBS 4417]
Length = 244
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAE+NPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 66 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEFNPKRFAAVIMRIREPKTTALIFASGKM 125
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 126 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 185
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLL+FVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 186 FSSYEPELFPGLIYRMVKPKIVLLVFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 244
>gi|281351746|gb|EFB27330.1| hypothetical protein PANDA_014728 [Ailuropoda melanoleuca]
Length = 308
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 189 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 248
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 249 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 307
>gi|62858635|ref|NP_001016339.1| TATA-box-binding protein [Xenopus (Silurana) tropicalis]
gi|123907365|sp|Q28GG8.1|TBP_XENTR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|89266978|emb|CAJ83650.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
gi|169642632|gb|AAI60510.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
gi|213624491|gb|AAI71176.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
gi|213627356|gb|AAI71174.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
Length = 297
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 118 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 177
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 178 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 237
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 238 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 296
>gi|403418333|emb|CCM05033.1| predicted protein [Fibroporia radiculosa]
Length = 317
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 139 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 198
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 199 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 258
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 259 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 316
>gi|37726728|gb|AAO34515.1| TATA-binding protein [Petromyzon marinus]
Length = 292
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 113 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 172
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 173 VCTGAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 232
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 233 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 291
>gi|157265561|ref|NP_001098076.1| TATA box-binding protein-like protein 2 [Pan troglodytes]
gi|166987366|sp|A6H907.1|TBPL2_PANTR RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|148910843|tpg|DAA06032.1| TPA_inf: TATA box binding protein-like 2 [Pan troglodytes]
Length = 376
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 197 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 256
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 257 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 316
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 317 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 375
>gi|354486300|ref|XP_003505319.1| PREDICTED: TATA-box-binding protein-like [Cricetulus griseus]
gi|344249386|gb|EGW05490.1| TATA-box-binding protein [Cricetulus griseus]
Length = 315
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 136 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 195
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 196 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 255
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 256 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 314
>gi|345560531|gb|EGX43656.1| hypothetical protein AOL_s00215g392 [Arthrobotrys oligospora ATCC
24927]
Length = 257
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/181 (82%), Positives = 163/181 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 77 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 136
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 196
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 197 HHFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLSDFRK 256
Query: 189 V 189
V
Sbjct: 257 V 257
>gi|3122925|sp|Q12731.1|TBP_EMENI RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|887878|gb|AAB57874.1| TATA-box binding protein [Emericella nidulans]
gi|887880|gb|AAB57876.1| TATA-box binding protein [Emericella nidulans]
Length = 268
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 90 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 149
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 150 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 209
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 210 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 268
>gi|119491905|ref|XP_001263447.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Neosartorya fischeri NRRL 181]
gi|119411607|gb|EAW21550.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Neosartorya fischeri NRRL 181]
Length = 264
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 86 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 145
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 146 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 205
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 206 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 264
>gi|414872051|tpg|DAA50608.1| TPA: hypothetical protein ZEAMMB73_869091, partial [Zea mays]
Length = 195
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/158 (95%), Positives = 155/158 (98%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA
Sbjct: 80 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKV 168
FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKV
Sbjct: 140 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV 177
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+QNIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V TG
Sbjct: 25 LQNIVSTVNLDCKLDLKAIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 83
Query: 166 AKVRDETYTA 175
AK ++ A
Sbjct: 84 AKSEQQSKLA 93
>gi|115396162|ref|XP_001213720.1| TATA-box binding protein [Aspergillus terreus NIH2624]
gi|114193289|gb|EAU34989.1| TATA-box binding protein [Aspergillus terreus NIH2624]
Length = 263
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 85 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 144
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 145 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 204
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 205 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 263
>gi|367010504|ref|XP_003679753.1| hypothetical protein TDEL_0B04130 [Torulaspora delbrueckii]
gi|359747411|emb|CCE90542.1| hypothetical protein TDEL_0B04130 [Torulaspora delbrueckii]
Length = 235
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 163/179 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 57 GIVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 116
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 117 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 176
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLL+FVSGK+V+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 177 FSSYEPELFPGLIYRMVKPKIVLLVFVSGKVVLTGAKQREEIYQAFEAIYPVLSEFRKM 235
>gi|317036144|ref|XP_001397705.2| TATA-box-binding protein [Aspergillus niger CBS 513.88]
Length = 262
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 84 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 143
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 144 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 203
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 204 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 262
>gi|392567667|gb|EIW60842.1| TBP-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 308
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 130 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 189
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 190 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 249
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 250 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 307
>gi|302693080|ref|XP_003036219.1| hypothetical protein SCHCODRAFT_81516 [Schizophyllum commune H4-8]
gi|300109915|gb|EFJ01317.1| hypothetical protein SCHCODRAFT_81516 [Schizophyllum commune H4-8]
Length = 286
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 108 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 167
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDV+FPIRLEGLAYSHG
Sbjct: 168 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVRFPIRLEGLAYSHGQ 227
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 228 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 285
>gi|358368366|dbj|GAA84983.1| TATA-box binding protein [Aspergillus kawachii IFO 4308]
Length = 262
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 84 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 143
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 144 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 203
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 204 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 262
>gi|169770491|ref|XP_001819715.1| TATA-box-binding protein [Aspergillus oryzae RIB40]
gi|238487092|ref|XP_002374784.1| transcription factor TFIID [Aspergillus flavus NRRL3357]
gi|83767574|dbj|BAE57713.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699663|gb|EED56002.1| transcription factor TFIID [Aspergillus flavus NRRL3357]
gi|391867294|gb|EIT76540.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Aspergillus oryzae 3.042]
Length = 263
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 85 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 144
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 145 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 204
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRKV
Sbjct: 205 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKV 263
>gi|409046465|gb|EKM55945.1| hypothetical protein PHACADRAFT_256913 [Phanerochaete carnosa
HHB-10118-sp]
Length = 321
Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 143 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 202
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 203 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 262
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 263 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 320
>gi|91081661|ref|XP_969326.1| PREDICTED: similar to DNA-binding protein [Tribolium castaneum]
gi|270006234|gb|EFA02682.1| hypothetical protein TcasGA2_TC008403 [Tribolium castaneum]
Length = 311
Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 160/176 (90%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 135 VPQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 194
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H +FS
Sbjct: 195 TGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSSFS 254
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK+R E Y AF+NIYP+L F+K
Sbjct: 255 SYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRQEIYEAFDNIYPILKSFKK 310
>gi|147900802|ref|NP_001084369.1| TATA-box-binding protein [Xenopus laevis]
gi|135642|sp|P27633.1|TBP_XENLA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|65149|emb|CAA46832.1| transcription factor [Xenopus laevis]
gi|76779674|gb|AAI06645.1| TFIIDtau protein [Xenopus laevis]
Length = 297
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 118 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 177
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 178 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 237
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 238 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 296
>gi|449667471|ref|XP_002160884.2| PREDICTED: TATA-box-binding protein-like isoform 1 [Hydra
magnipapillata]
Length = 255
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 77 GIIPQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR+IQKLGFPAKF DFKIQNIVGSCDVKFPIRLEGL +H
Sbjct: 137 VCTGAKSEEQSRLAARKYARVIQKLGFPAKFVDFKIQNIVGSCDVKFPIRLEGLVLAHSQ 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFE+IYP+L FRK
Sbjct: 197 FCSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFESIYPILRGFRKT 255
>gi|17298078|dbj|BAB78513.1| TATA-box binding protein [Lethenteron reissneri]
Length = 301
Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 122 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 181
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 182 VCTGAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 241
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 242 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 300
>gi|449296869|gb|EMC92888.1| hypothetical protein BAUCODRAFT_76816 [Baudoinia compniacensis UAMH
10762]
Length = 240
Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 60 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 119
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 120 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 179
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 180 HMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 239
Query: 189 V 189
Sbjct: 240 T 240
>gi|426200613|gb|EKV50537.1| hypothetical protein AGABI2DRAFT_44722, partial [Agaricus bisporus
var. bisporus H97]
Length = 189
Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 11 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 70
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 71 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 130
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EFRK
Sbjct: 131 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 188
>gi|153792245|ref|NP_001093264.1| TATA box binding protein [Takifugu rubripes]
gi|148910855|tpg|DAA06038.1| TPA_inf: TATA box binding protein [Takifugu rubripes]
Length = 301
Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 122 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 181
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 182 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 241
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 242 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 300
>gi|345309405|ref|XP_003428833.1| PREDICTED: LOW QUALITY PROTEIN: TATA-box-binding protein-like
[Ornithorhynchus anatinus]
Length = 308
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 189 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 248
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 249 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFQNIYPILKGFRKT 307
>gi|453083461|gb|EMF11507.1| transcription initiation factor TFIID, TATA binding protein
[Mycosphaerella populorum SO2202]
Length = 258
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 78 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 137
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 138 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 197
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 198 HMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 257
Query: 189 V 189
Sbjct: 258 T 258
>gi|348168341|gb|AEP68421.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168347|gb|AEP68424.1| TATA-binding protein [Saccharomyces cerevisiae]
Length = 240
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|37726742|gb|AAO34521.1| TATA-binding protein [Eptatretus stoutii]
Length = 324
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 145 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 204
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 205 VCTGAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 264
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 265 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRTEIYEAFDNIYPILKGFRKT 323
>gi|357612491|gb|EHJ68026.1| TATA-box-binding protein [Danaus plexippus]
Length = 306
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL+CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 128 GILPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 187
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 188 VCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 247
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 248 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 305
>gi|26351419|dbj|BAC39346.1| unnamed protein product [Mus musculus]
Length = 316
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ RNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPQLQNIVSTVNLGCKLDLKTIALRPRNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 197 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 256
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 257 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 315
>gi|494632|pdb|1TBP|A Chain A, Crystal Structure Of Yeast Tata-Binding Protein And Model
For Interaction With Dna
gi|494633|pdb|1TBP|B Chain B, Crystal Structure Of Yeast Tata-Binding Protein And Model
For Interaction With Dna
Length = 180
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/180 (82%), Positives = 163/180 (90%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
+G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGK
Sbjct: 1 MGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 60
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MV TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 61 MVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 120
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 121 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 180
>gi|269980507|gb|ACZ56425.1| TATA-binding protein [Litopenaeus vannamei]
Length = 300
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKL+LKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 122 GIVPQLQNIVSTVNLSCKLELKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 181
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQ S+LAARKYARI+QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 182 VCTGAKSEQDSRLAARKYARIVQKLGFPAKFMDFKIQNMVGSCDVKFPIRLEGLVLTHSQ 241
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR++ Y AF+NIYP+L F+K
Sbjct: 242 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRNQIYEAFDNIYPILKSFKK 299
>gi|172899|gb|AAA35146.1| tata-box factor protein [Saccharomyces cerevisiae]
Length = 240
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|398364911|ref|NP_011075.3| Spt15p [Saccharomyces cerevisiae S288c]
gi|135643|sp|P13393.3|TBP_YEAST RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription factor D; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|73535263|pdb|1RM1|A Chain A, Structure Of A Yeast TfiiaTBPTATA-Box Dna Complex
gi|4610|emb|CAA34751.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171132|gb|AAA34458.1| TATA box factor [Saccharomyces cerevisiae]
gi|172901|gb|AAA35147.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|603388|gb|AAB64675.1| Spt15p: TATA-box binding protein tfIId [Saccharomyces cerevisiae]
gi|151944866|gb|EDN63125.1| TBP [Saccharomyces cerevisiae YJM789]
gi|190405707|gb|EDV08974.1| TATA-box binding protein [Saccharomyces cerevisiae RM11-1a]
gi|256272072|gb|EEU07084.1| Spt15p [Saccharomyces cerevisiae JAY291]
gi|259146076|emb|CAY79336.1| Spt15p [Saccharomyces cerevisiae EC1118]
gi|285811781|tpg|DAA07809.1| TPA: Spt15p [Saccharomyces cerevisiae S288c]
gi|323309314|gb|EGA62532.1| Spt15p [Saccharomyces cerevisiae FostersO]
gi|323333807|gb|EGA75198.1| Spt15p [Saccharomyces cerevisiae AWRI796]
gi|323337848|gb|EGA79088.1| Spt15p [Saccharomyces cerevisiae Vin13]
gi|323348846|gb|EGA83084.1| Spt15p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355333|gb|EGA87158.1| Spt15p [Saccharomyces cerevisiae VL3]
gi|348168207|gb|AEP68354.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168209|gb|AEP68355.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168211|gb|AEP68356.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168213|gb|AEP68357.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168215|gb|AEP68358.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168217|gb|AEP68359.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168219|gb|AEP68360.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168221|gb|AEP68361.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168223|gb|AEP68362.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168225|gb|AEP68363.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168227|gb|AEP68364.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168229|gb|AEP68365.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168235|gb|AEP68368.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168237|gb|AEP68369.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168239|gb|AEP68370.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168241|gb|AEP68371.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168243|gb|AEP68372.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168245|gb|AEP68373.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168247|gb|AEP68374.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168249|gb|AEP68375.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168251|gb|AEP68376.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168253|gb|AEP68377.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168255|gb|AEP68378.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168257|gb|AEP68379.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168259|gb|AEP68380.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168261|gb|AEP68381.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168263|gb|AEP68382.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168265|gb|AEP68383.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168267|gb|AEP68384.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168269|gb|AEP68385.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168271|gb|AEP68386.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168273|gb|AEP68387.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168275|gb|AEP68388.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168277|gb|AEP68389.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168279|gb|AEP68390.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168281|gb|AEP68391.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168283|gb|AEP68392.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168285|gb|AEP68393.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168287|gb|AEP68394.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168289|gb|AEP68395.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168291|gb|AEP68396.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168293|gb|AEP68397.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168295|gb|AEP68398.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168297|gb|AEP68399.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168299|gb|AEP68400.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168301|gb|AEP68401.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168303|gb|AEP68402.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168305|gb|AEP68403.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168307|gb|AEP68404.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168309|gb|AEP68405.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168311|gb|AEP68406.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168313|gb|AEP68407.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168315|gb|AEP68408.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168317|gb|AEP68409.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168319|gb|AEP68410.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168321|gb|AEP68411.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168323|gb|AEP68412.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168325|gb|AEP68413.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168327|gb|AEP68414.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168329|gb|AEP68415.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168331|gb|AEP68416.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168333|gb|AEP68417.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168335|gb|AEP68418.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168337|gb|AEP68419.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168339|gb|AEP68420.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168343|gb|AEP68422.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168345|gb|AEP68423.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168349|gb|AEP68425.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168351|gb|AEP68426.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168353|gb|AEP68427.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168355|gb|AEP68428.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168357|gb|AEP68429.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168361|gb|AEP68431.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168363|gb|AEP68432.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168365|gb|AEP68433.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168367|gb|AEP68434.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168369|gb|AEP68435.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168371|gb|AEP68436.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|349577810|dbj|GAA22978.1| K7_Spt15p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765929|gb|EHN07432.1| Spt15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299852|gb|EIW10944.1| Spt15p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|226502|prf||1515352A transcription initiation factor TFIID
Length = 240
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|194388082|dbj|BAG65425.1| unnamed protein product [Homo sapiens]
Length = 318
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 139 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 198
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 199 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 258
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 259 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 317
>gi|157265563|ref|NP_001098077.1| TATA-box-binding protein [Pan troglodytes]
gi|148910853|tpg|DAA06037.1| TPA_inf: TATA box binding protein [Pan troglodytes]
Length = 336
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNP RFAAVIMRIREP+TTALIF+SGKM
Sbjct: 157 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPTRFAAVIMRIREPRTTALIFSSGKM 216
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 217 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 276
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 277 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 335
>gi|348168231|gb|AEP68366.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168233|gb|AEP68367.1| TATA-binding protein [Saccharomyces cerevisiae]
Length = 240
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|348168359|gb|AEP68430.1| TATA-binding protein [Saccharomyces cerevisiae]
Length = 240
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|452989027|gb|EME88782.1| hypothetical protein MYCFIDRAFT_209898 [Pseudocercospora fijiensis
CIRAD86]
Length = 260
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 80 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 139
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 140 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 199
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 200 HMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 259
Query: 189 V 189
Sbjct: 260 T 260
>gi|393220621|gb|EJD06107.1| TATA-box binding protein, partial [Fomitiporia mediterranea MF3/22]
Length = 189
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 11 GIIPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 71 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 130
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EF+K
Sbjct: 131 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFKK 188
>gi|225719098|gb|ACO15395.1| TATA-box-binding protein [Caligus clemensi]
Length = 323
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTV+L CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 145 GIVPQLQNIVSTVSLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 204
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARI+QKLGFPA+FKDFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 205 VCTGAKSEEDSRLAARKYARIVQKLGFPARFKDFKIQNMVGSCDVKFPIRLEGLVLTHSQ 264
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 265 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKNFKK 322
>gi|241566250|ref|XP_002402125.1| TATA-box binding protein (TBP), component of TFII-D and TFIIIB,
putative [Ixodes scapularis]
gi|215499985|gb|EEC09479.1| TATA-box binding protein (TBP), component of TFII-D and TFIIIB,
putative [Ixodes scapularis]
Length = 286
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 108 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 167
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYARIIQKLGF AKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 168 VCTGAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQ 227
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 228 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRAEIYEAFDNIYPILKGFRK 285
>gi|390598615|gb|EIN08013.1| TATA-box binding protein, partial [Punctularia strigosozonata
HHB-11173 SS5]
Length = 189
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/178 (83%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 11 GIVPQLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 70
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LAARKYARIIQKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 71 VVTGAKSEDDSRLAARKYARIIQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 130
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF IY VL EFRK
Sbjct: 131 FSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYAAFNTIYTVLCEFRK 188
>gi|398406521|ref|XP_003854726.1| transcription factor TFIID complex [Zymoseptoria tritici IPO323]
gi|339474610|gb|EGP89702.1| transcription factor TFIID complex [Zymoseptoria tritici IPO323]
Length = 261
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 81 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 140
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 141 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 200
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 201 HMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 260
Query: 189 V 189
Sbjct: 261 T 261
>gi|226088558|dbj|BAH37024.1| TATA-box binding protein [Oryzias latipes]
Length = 305
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 126 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 185
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF D KIQN+VGSCDVKFPIRLEGL +H
Sbjct: 186 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDLKIQNMVGSCDVKFPIRLEGLVLTHQQ 245
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 246 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 304
>gi|388580273|gb|EIM20589.1| TBP-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 238
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 60 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 119
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAY+HG
Sbjct: 120 VVTGAKSEDDSKLASRKYARIIQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYTHGH 179
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF NIY L ++RK
Sbjct: 180 FSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYTAFNNIYATLLDYRK 237
>gi|336465922|gb|EGO54087.1| hypothetical protein NEUTE1DRAFT_118055 [Neurospora tetrasperma
FGSC 2508]
gi|350287243|gb|EGZ68490.1| putative transcription initiation factor [Neurospora tetrasperma
FGSC 2509]
Length = 257
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 79 GMTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 138
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 139 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 198
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 199 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 257
>gi|62528966|gb|AAX84779.1| TATA-binding protein [Hydractinia echinata]
Length = 227
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIA ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 49 GIVPQLQNIVSTVNLSCKLDLKKIASHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 108
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR+IQKLGFPAKF DFKIQNIVGSCDVKFPIRLEGL +H
Sbjct: 109 VCTGAKSEEQSRLAARKYARVIQKLGFPAKFVDFKIQNIVGSCDVKFPIRLEGLVLAHSQ 168
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SYEPELFPGLIYRM +PKIVLLIFVSGK+V+TGAKVR E Y AFE+IYP+L FRK
Sbjct: 169 FCSYEPELFPGLIYRMVKPKIVLLIFVSGKVVLTGAKVRSEIYEAFESIYPILRGFRKT 227
>gi|212526960|ref|XP_002143637.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|212526962|ref|XP_002143638.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|212526964|ref|XP_002143639.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|62956011|gb|AAY23352.1| TATA-binding protein [Talaromyces marneffei]
gi|62956013|gb|AAY23353.1| TATA-binding protein [Talaromyces marneffei]
gi|210073035|gb|EEA27122.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|210073036|gb|EEA27123.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|210073037|gb|EEA27124.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
Length = 255
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 197 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKT 255
>gi|242782217|ref|XP_002479956.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
gi|242782222|ref|XP_002479957.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
gi|218720103|gb|EED19522.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
gi|218720104|gb|EED19523.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
Length = 255
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 197 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKT 255
>gi|999660|pdb|1YTB|A Chain A, Crystal Structure Of A Yeast TbpTATA-Box Complex
gi|999661|pdb|1YTB|B Chain B, Crystal Structure Of A Yeast TbpTATA-Box Complex
gi|1633307|pdb|1YTF|A Chain A, Yeast TfiiaTBPDNA COMPLEX
gi|5822424|pdb|1TBA|B Chain B, Solution Structure Of A Tbp-Tafii230 Complex: Protein
Mimicry Of The Minor Groove Surface Of The Tata Box
Unwound By Tbp, Nmr, 25 Structures
gi|29726664|pdb|1NGM|A Chain A, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|29726668|pdb|1NGM|E Chain E, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|29726672|pdb|1NGM|I Chain I, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|29726676|pdb|1NGM|M Chain M, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|38492530|pdb|1NH2|A Chain A, Crystal Structure Of A Yeast TfiiaTBPDNA COMPLEX
Length = 180
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 2 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 61
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 62 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 121
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 122 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 180
>gi|402225771|gb|EJU05832.1| TBP-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 235
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 57 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 116
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF +F DFKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 117 VVTGAKSEDDSRLASRKYARIVQKLGFDTRFVDFKIQNIVGSCDVKFPIRLEGLAYSHGQ 176
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IY VL EF+K
Sbjct: 177 FSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLQEFKK 234
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + + Y P+ F +I R+ +PK LIF SGK+V TG
Sbjct: 152 IQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTG 211
Query: 75 AKSEQQSKLAARKYARIIQKLGFP 98
AK ++ A ++Q+ P
Sbjct: 212 AKVREEIYTAFNTIYTVLQEFKKP 235
>gi|261194208|ref|XP_002623509.1| transcription initiation factor TFIID-2 [Ajellomyces dermatitidis
SLH14081]
gi|239588523|gb|EEQ71166.1| transcription initiation factor TFIID-2 [Ajellomyces dermatitidis
SLH14081]
gi|239606906|gb|EEQ83893.1| transcription initiation factor TFIID-2 [Ajellomyces dermatitidis
ER-3]
gi|327351372|gb|EGE80229.1| hypothetical protein BDDG_03170 [Ajellomyces dermatitidis ATCC
18188]
Length = 262
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/180 (82%), Positives = 161/180 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 82 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 141
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 142 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 201
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRK
Sbjct: 202 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLADFRK 261
>gi|320588959|gb|EFX01427.1| RNA polymerase 1 and 3 transcription factor complex component
[Grosmannia clavigera kw1407]
Length = 268
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/173 (85%), Positives = 158/173 (91%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMV TGAK
Sbjct: 96 ENIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAK 155
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
SE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H FSSYEP
Sbjct: 156 SEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEP 215
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
ELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E YTAFE IYPVL +FRKV
Sbjct: 216 ELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYTAFEMIYPVLQDFRKV 268
>gi|2897847|gb|AAC03409.1| transcription factor IID [Homo sapiens]
Length = 339
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ RNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 160 GIVPQLQNIVSTVNLGCKLDLKTIALRRRNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 219
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 220 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 279
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 280 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 338
>gi|312382984|gb|EFR28233.1| hypothetical protein AND_04068 [Anopheles darlingi]
Length = 327
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/173 (82%), Positives = 159/173 (91%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 154 LQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 213
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE+ S+LAARKYARIIQKLGF AKF DFK+QN+VGSCDV+FPIRLEGL +HG FSSYE
Sbjct: 214 KSEEDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGRFSSYE 273
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L F+K
Sbjct: 274 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKSFKK 326
>gi|85096222|ref|XP_960219.1| TATA-box binding protein [Neurospora crassa OR74A]
gi|28921702|gb|EAA30983.1| TATA-box binding protein [Neurospora crassa OR74A]
gi|39979211|emb|CAE85582.1| probable TRANSCRIPTION INITIATION FACTOR TFIID [Neurospora crassa]
Length = 257
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 79 GMTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 138
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 139 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 198
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 199 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 257
>gi|440638539|gb|ELR08458.1| TATA-box-binding protein [Geomyces destructans 20631-21]
Length = 262
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 163/187 (87%)
Query: 3 PYICYLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTA 62
P + G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTA
Sbjct: 76 PGATQGVSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTA 135
Query: 63 LIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLE 122
LIFASGKMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLE
Sbjct: 136 LIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLE 195
Query: 123 GLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPV 182
GLA H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPV
Sbjct: 196 GLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPV 255
Query: 183 LTEFRKV 189
L +F+KV
Sbjct: 256 LQDFKKV 262
>gi|15826400|pdb|1JFI|C Chain C, Crystal Structure Of The Nc2-Tbp-Dna Ternary Complex
Length = 185
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 6 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 65
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 66 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 125
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 126 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 183
>gi|393238580|gb|EJD46116.1| TBP-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 305
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 127 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 186
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG
Sbjct: 187 VVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQ 246
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF IY VL EFRK
Sbjct: 247 FSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYAAFNTIYTVLCEFRK 304
>gi|401625996|gb|EJS43965.1| spt15p [Saccharomyces arboricola H-6]
Length = 240
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNP+RFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPRRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|321473578|gb|EFX84545.1| hypothetical protein DAPPUDRAFT_194512 [Daphnia pulex]
Length = 312
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 134 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 193
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARI+QKL FPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 194 VCTGAKSEEDSRLAARKYARIVQKLNFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSQ 253
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 254 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDNIYPILKSFKK 311
>gi|38492542|pdb|1NVP|A Chain A, Human TfiiaTBPDNA COMPLEX
Length = 181
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 2 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 61
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 62 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 121
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 122 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 179
>gi|365761010|gb|EHN02687.1| Spt15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842615|gb|EJT44751.1| SPT15-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNP+RFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPRRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|452839378|gb|EME41317.1| TATA-box binding-like protein [Dothistroma septosporum NZE10]
Length = 254
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 74 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 133
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 134 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 193
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 194 HMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 253
Query: 189 V 189
Sbjct: 254 T 254
>gi|407927098|gb|EKG20002.1| TATA-box binding protein [Macrophomina phaseolina MS6]
Length = 250
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/180 (82%), Positives = 162/180 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 70 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 129
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 130 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 189
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 190 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 249
>gi|242022166|ref|XP_002431512.1| trf2 protein, putative [Pediculus humanus corporis]
gi|212516806|gb|EEB18774.1| trf2 protein, putative [Pediculus humanus corporis]
Length = 298
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIA+ ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 120 GIVPQLQNIVSTVNLGCKLDLKKIAIHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 179
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 180 VCTGAKSEDDSRLAARKYARIIQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 239
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 240 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 297
>gi|54696182|gb|AAV38463.1| TATA box binding protein [Homo sapiens]
Length = 336
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 157 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 216
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEG +H
Sbjct: 217 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGPVLTHQQ 276
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 277 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 335
>gi|37726730|gb|AAO34516.1| TATA-binding protein isoform 1 [Branchiostoma floridae]
gi|37726734|gb|AAO34519.1| TATA-binding protein isoform 3 [Branchiostoma floridae]
Length = 331
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIR+P+TTALIF+SGKM
Sbjct: 152 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKM 211
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QS+LAARKYAR++QKLGFP KF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 212 VCTGAKSEDQSRLAARKYARVVQKLGFPCKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQ 271
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR+E Y AFE IYP+L FRK
Sbjct: 272 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFETIYPILKGFRKT 330
>gi|340939166|gb|EGS19788.1| putative tata-box binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 255
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 197 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 255
>gi|147902539|ref|NP_001080921.1| TATA box-binding protein-like protein 2 [Xenopus laevis]
gi|75570954|sp|Q5UE94.1|TBPL2_XENLA RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|54402365|gb|AAV34742.1| TATA-binding protein 2 [Xenopus laevis]
Length = 320
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 141 GIVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 200
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 201 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 260
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 261 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKT 319
>gi|37726732|gb|AAO34517.1| TATA-binding protein isoform 2 [Branchiostoma floridae]
Length = 329
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIR+P+TTALIF+SGKM
Sbjct: 150 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKM 209
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QS+LAARKYAR++QKLGFP KF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 210 VCTGAKSEDQSRLAARKYARVVQKLGFPCKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQ 269
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR+E Y AFE IYP+L FRK
Sbjct: 270 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFETIYPILKGFRKT 328
>gi|1827869|pdb|1TGH|A Chain A, Tata Binding Protein (Tbp)DNA COMPLEX
Length = 185
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 6 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 65
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 66 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 125
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 126 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 183
>gi|336276668|ref|XP_003353087.1| hypothetical protein SMAC_03405 [Sordaria macrospora k-hell]
gi|380092572|emb|CCC09849.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 257
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 79 GMTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 138
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 139 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 198
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 199 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 257
>gi|322711070|gb|EFZ02644.1| TATA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 253
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 253
>gi|3122921|sp|O17488.1|TBP_ARTSF RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|2623958|emb|CAA05488.1| TATA-binding protein [Artemia franciscana]
Length = 275
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL C+LDLKKIALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 98 GIIPVLENIVSTVNLGCRLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 157
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARI+QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 158 VCTGAKSEEDSRLAARKYARIVQKLGFSAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 217
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L F+K
Sbjct: 218 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKGFKK 275
>gi|361131465|gb|EHL03148.1| putative TATA-box-binding protein [Glarea lozoyensis 74030]
Length = 255
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 75 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 134
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 194
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +F+K
Sbjct: 195 HNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFKK 254
Query: 189 V 189
V
Sbjct: 255 V 255
>gi|158287840|ref|XP_309748.2| AGAP010958-PA [Anopheles gambiae str. PEST]
gi|157019382|gb|EAA45305.2| AGAP010958-PA [Anopheles gambiae str. PEST]
Length = 323
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/173 (82%), Positives = 158/173 (91%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 150 LQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 209
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE S+LAARKYARIIQKLGF AKF DFK+QN+VGSCDV+FPIRLEGL +HG FSSYE
Sbjct: 210 KSEDDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGRFSSYE 269
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L F+K
Sbjct: 270 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKSFKK 322
>gi|342879468|gb|EGU80715.1| hypothetical protein FOXB_08755 [Fusarium oxysporum Fo5176]
Length = 254
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 76 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 135
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 136 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 195
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 196 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 254
>gi|207345821|gb|EDZ72518.1| YER148Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 240
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNP RFAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPSRFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|6980708|pdb|1C9B|B Chain B, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980710|pdb|1C9B|F Chain F, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980712|pdb|1C9B|J Chain J, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980714|pdb|1C9B|N Chain N, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980716|pdb|1C9B|R Chain R, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
Length = 180
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 3 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 62
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 63 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 122
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 123 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 180
>gi|33323635|gb|AAQ07596.1|AF503449_1 TATA-binding protein [Danio rerio]
Length = 302
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VGTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT 301
>gi|408395610|gb|EKJ74788.1| hypothetical protein FPSE_05036 [Fusarium pseudograminearum CS3096]
Length = 254
Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 76 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 135
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 136 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 195
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 196 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 254
>gi|358386238|gb|EHK23834.1| hypothetical protein TRIVIDRAFT_89322 [Trichoderma virens Gv29-8]
Length = 253
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 253
>gi|346974478|gb|EGY17930.1| TATA-box-binding protein [Verticillium dahliae VdLs.17]
Length = 249
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 71 GLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 130
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 131 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 190
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 191 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 249
>gi|62859883|ref|NP_001017309.1| TATA box-binding protein-like protein 2 [Xenopus (Silurana)
tropicalis]
gi|123915918|sp|Q28DH2.1|TBPL2_XENTR RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; Short=xTBPL2; AltName:
Full=TATA box-binding protein-related factor 3;
Short=TBP-related factor 3
gi|89274001|emb|CAJ81377.1| Novel protein similar to TBP [Xenopus (Silurana) tropicalis]
Length = 322
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 143 GIVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 202
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 203 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 262
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 263 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKT 321
>gi|426376979|ref|XP_004055257.1| PREDICTED: TATA box-binding protein-like protein 2 [Gorilla gorilla
gorilla]
Length = 375
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 162/178 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIALQA+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 197 GIVPQLQNIVSTVNLACKLDLKKIALQAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 256
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 257 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 316
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 317 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
>gi|340517005|gb|EGR47251.1| TATA binding protein [Trichoderma reesei QM6a]
Length = 253
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 253
>gi|335309027|ref|XP_003361466.1| PREDICTED: TATA-box-binding protein [Sus scrofa]
Length = 326
Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 163/185 (88%), Gaps = 6/185 (3%)
Query: 5 ICYLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALI 64
IC I+G NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALI
Sbjct: 147 ICNRIVG------NIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALI 200
Query: 65 FASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 124
F+SGKMVCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL
Sbjct: 201 FSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGL 260
Query: 125 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
+H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L
Sbjct: 261 VLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILK 320
Query: 185 EFRKV 189
FRK
Sbjct: 321 GFRKT 325
>gi|164429967|gb|ABY55311.1| TATA-binding protein 1 [Gallus gallus]
Length = 302
Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEY+PKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYDPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR+++KLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVRKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 301
>gi|367029935|ref|XP_003664251.1| hypothetical protein MYCTH_2306864 [Myceliophthora thermophila ATCC
42464]
gi|347011521|gb|AEO59006.1| hypothetical protein MYCTH_2306864 [Myceliophthora thermophila ATCC
42464]
Length = 257
Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 79 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 138
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 139 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 198
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 199 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 257
>gi|310798673|gb|EFQ33566.1| transcription factor TFIID [Glomerella graminicola M1.001]
Length = 256
Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 78 GLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 137
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 138 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 197
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 198 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 256
>gi|170674514|gb|ACB30147.1| TATA binding protein [Epichloe festucae]
Length = 256
Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 78 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 137
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 138 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 197
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 198 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 256
>gi|171681966|ref|XP_001905926.1| hypothetical protein [Podospora anserina S mat+]
gi|170940942|emb|CAP66592.1| unnamed protein product [Podospora anserina S mat+]
Length = 255
Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRK+
Sbjct: 197 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKM 255
>gi|401886560|gb|EJT50588.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit) [Trichosporon asahii var. asahii CBS 2479]
gi|406698490|gb|EKD01726.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit) [Trichosporon asahii var. asahii CBS 8904]
Length = 231
Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 147/180 (81%), Positives = 163/180 (90%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V ++NIV+TVNL+C+LDLK IAL ARNAEYNPKRFAAV+MRIREPKTTALIFASG
Sbjct: 50 VQGLVPVLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVVMRIREPKTTALIFASG 109
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDVKFPIRLEGLA+SH
Sbjct: 110 KMVVTGAKSEDDSRLASRKYARIIQKLGFDAKFAEFKIQNIVGSCDVKFPIRLEGLAFSH 169
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
GAFSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF+ IY VL EFRK
Sbjct: 170 GAFSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYMAFKQIYSVLVEFRK 229
>gi|358394886|gb|EHK44279.1| hypothetical protein TRIATDRAFT_300545 [Trichoderma atroviride IMI
206040]
Length = 253
Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 253
>gi|429859533|gb|ELA34313.1| RNA polymerase i and iii transcription factor complex component
[Colletotrichum gloeosporioides Nara gc5]
Length = 256
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 78 GLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 137
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 138 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 197
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 198 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 256
>gi|302918240|ref|XP_003052617.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733557|gb|EEU46904.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 253
Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 253
>gi|156053057|ref|XP_001592455.1| TATA-box binding protein [Sclerotinia sclerotiorum 1980]
gi|154704474|gb|EDO04213.1| TATA-box binding protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 251
Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/181 (81%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASG
Sbjct: 71 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASG 130
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 131 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 190
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +F+K
Sbjct: 191 MNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFKK 250
Query: 189 V 189
V
Sbjct: 251 V 251
>gi|323305296|gb|EGA59043.1| Spt15p [Saccharomyces cerevisiae FostersB]
Length = 240
Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 147/179 (82%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TV L C+LDLK +AL ARNAEYNPK FAAVIMRIREPKTTALIFASGKM
Sbjct: 62 GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKXFAAVIMRIREPKTTALIFASGKM 121
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQK+GF AKF DFKIQNIVGSCDVKFPIRLEGLA+SHG
Sbjct: 122 VVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT 181
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE IYPVL+EFRK+
Sbjct: 182 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM 240
>gi|395535316|ref|XP_003769674.1| PREDICTED: TATA-box-binding protein [Sarcophilus harrisii]
Length = 309
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 146/180 (81%), Positives = 162/180 (90%), Gaps = 1/180 (0%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 189 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 248
Query: 131 F-SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 249 FSSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 308
>gi|389632499|ref|XP_003713902.1| TATA-box-binding protein [Magnaporthe oryzae 70-15]
gi|351646235|gb|EHA54095.1| TATA-box-binding protein [Magnaporthe oryzae 70-15]
gi|440473248|gb|ELQ42063.1| TATA-box-binding protein [Magnaporthe oryzae Y34]
gi|440480212|gb|ELQ60887.1| TATA-box-binding protein [Magnaporthe oryzae P131]
Length = 255
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 197 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 255
>gi|196007384|ref|XP_002113558.1| TATA-binding protein [Trichoplax adhaerens]
gi|190583962|gb|EDV24032.1| TATA-binding protein [Trichoplax adhaerens]
Length = 203
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 141/174 (81%), Positives = 162/174 (93%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL C+L+L++IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 30 LQNIVSTVNLGCRLELQRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 89
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE+QS+LAARKYAR+IQKLGFPAKF +F+IQN+VGSCDVKFPIRLEGL +HG FSSYE
Sbjct: 90 KSEEQSRLAARKYARVIQKLGFPAKFTEFRIQNMVGSCDVKFPIRLEGLVLAHGQFSSYE 149
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVRDE Y AF+NIYP+L FRK
Sbjct: 150 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRDEIYEAFDNIYPILKGFRKT 203
>gi|367040469|ref|XP_003650615.1| hypothetical protein THITE_2110255 [Thielavia terrestris NRRL 8126]
gi|346997876|gb|AEO64279.1| hypothetical protein THITE_2110255 [Thielavia terrestris NRRL 8126]
Length = 256
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 78 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 137
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 138 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHN 197
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRK+
Sbjct: 198 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKI 256
>gi|402086781|gb|EJT81679.1| TATA-box-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 255
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 77 GLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 136
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 196
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 197 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 255
>gi|154318373|ref|XP_001558505.1| transcription initiation factor TFIID, TATA binding protein
[Botryotinia fuckeliana B05.10]
gi|347837614|emb|CCD52186.1| similar to transcription initiation factor TFIID [Botryotinia
fuckeliana]
Length = 251
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/181 (81%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASG
Sbjct: 71 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASG 130
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 131 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 190
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +F+K
Sbjct: 191 MNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFKK 250
Query: 189 V 189
V
Sbjct: 251 V 251
>gi|193620436|ref|XP_001949590.1| PREDICTED: TATA-box-binding protein-like [Acyrthosiphon pisum]
Length = 298
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL C+LDLK IAL ARNAE+NPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 120 GIVPQLQNIVSTVNLGCRLDLKTIALHARNAEFNPKRFAAVIMRIREPRTTALIFSSGKM 179
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARIIQKL FPAKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 180 VCTGAKSEEDSRLAARKYARIIQKLSFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 239
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y A++NIYP+L F+K
Sbjct: 240 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAYDNIYPILKSFKK 297
>gi|406862826|gb|EKD15875.1| transcription initiation factor TFIID-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 264
Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 162/181 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 84 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 143
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 144 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 203
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +F+K
Sbjct: 204 HNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFKK 263
Query: 189 V 189
V
Sbjct: 264 V 264
>gi|39725630|tpg|DAA02137.1| TPA_exp: TBP-related factor 3 [Xenopus laevis]
Length = 320
Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 141 GIVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 200
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 201 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 260
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F+SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 261 FNSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKT 319
>gi|390333257|ref|XP_795391.3| PREDICTED: TATA-box-binding protein-like [Strongylocentrotus
purpuratus]
Length = 262
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL+C+LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 83 GIVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 142
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYAR++QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 143 VCTGAKSEDDSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 202
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF NIYP+L F+K
Sbjct: 203 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSFKKT 261
>gi|157167852|ref|XP_001662432.1| tata-box binding protein [Aedes aegypti]
gi|108871290|gb|EAT35515.1| AAEL012330-PA [Aedes aegypti]
Length = 319
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 159/173 (91%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL C+LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 146 LQNIVSTVNLSCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 205
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE+ S+LAARKYARIIQKLGF AKF DFK+QN+VGSCDV+FPIRLEGL +HG FSSYE
Sbjct: 206 KSEEDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGKFSSYE 265
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 266 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDNIYPILKSFKK 318
>gi|400597791|gb|EJP65515.1| transcription factor TFIID [Beauveria bassiana ARSEF 2860]
Length = 253
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKV 253
>gi|1942827|pdb|1CDW|A Chain A, Human Tbp Core Domain Complexed With Dna
Length = 179
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 2 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 61
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 62 VCTGAKSEENSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 121
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 122 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 179
>gi|315418834|gb|ADU15470.1| TATA box binding protein [Penaeus monodon]
Length = 300
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKL+LKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 122 GIVPQLQNIVSTVNLSCKLELKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 181
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQ S+LAARKYARI+QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 182 VCTGAKSEQDSRLAARKYARIVQKLGFPAKFMDFKIQNMVGSCDVKFPIRLEGLVLTHSQ 241
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVS K+V+TGAKVR++ Y AF+NIYP+L F+K
Sbjct: 242 FSSYEPELFPGLIYRMVKPRIVLLIFVSRKVVLTGAKVRNQIYEAFDNIYPILKSFKK 299
>gi|332237163|ref|XP_003267773.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-like
protein 2 [Nomascus leucogenys]
Length = 379
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 201 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 260
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 261 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 320
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 321 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 378
>gi|37726863|gb|AAO34522.1| TATA-binding protein [Ginglymostoma cirratum]
Length = 302
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAE PKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 123 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEKKPKRFAAVIMRIREPRTTALIFSSGKM 182
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 183 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 242
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 243 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 301
>gi|20799106|dbj|BAB92075.1| TATA binding protein [Hemicentrotus pulcherrimus]
Length = 250
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL+C+LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 71 GIVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 130
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYAR++QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 131 VCTGAKSEDDSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 190
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF NIYP+L F+K
Sbjct: 191 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSFKKT 249
>gi|255728115|ref|XP_002548983.1| TATA-box binding protein [Candida tropicalis MYA-3404]
gi|240133299|gb|EER32855.1| TATA-box binding protein [Candida tropicalis MYA-3404]
Length = 257
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 79 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 138
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGS DVKF IRLEGLA++HG
Sbjct: 139 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGT 198
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE+IYPVL EFRK
Sbjct: 199 FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEFRK 256
>gi|39930602|ref|NP_950248.1| TATA box-binding protein-like protein 2 [Homo sapiens]
gi|74749326|sp|Q6SJ96.1|TBPL2_HUMAN RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|38569209|gb|AAR24281.1| TBP-related factor 3 [Homo sapiens]
gi|90296776|gb|ABD93323.1| TATA box binding protein like 2 [Homo sapiens]
Length = 375
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 197 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 256
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 257 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 316
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 317 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
>gi|170044283|ref|XP_001849783.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|170067801|ref|XP_001868625.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167863845|gb|EDS27228.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167867494|gb|EDS30877.1| TATA-box-binding protein [Culex quinquefasciatus]
Length = 322
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 159/173 (91%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL C+LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 149 LQNIVSTVNLSCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 208
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE+ S+LAARKYARIIQKLGF AKF DFK+QN+VGSCDV+FPIRLEGL +HG FSSYE
Sbjct: 209 KSEEDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGKFSSYE 268
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 269 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDNIYPILKSFKK 321
>gi|397523415|ref|XP_003831727.1| PREDICTED: TATA box-binding protein-like protein 2 [Pan paniscus]
gi|410048302|ref|XP_003952543.1| PREDICTED: TATA box binding protein like 2 [Pan troglodytes]
Length = 375
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 197 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 256
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 257 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 316
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 317 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
>gi|109658498|gb|AAI17186.1| TATA box binding protein like 2 [Homo sapiens]
gi|109658806|gb|AAI17160.1| TATA box binding protein like 2 [Homo sapiens]
gi|313883330|gb|ADR83151.1| TATA box binding protein like 2 [synthetic construct]
Length = 375
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 197 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 256
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 257 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 316
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 317 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
>gi|119601081|gb|EAW80675.1| TATA box binding protein like 2, isoform CRA_a [Homo sapiens]
Length = 307
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 129 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 188
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 189 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 248
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 249 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 306
>gi|355693296|gb|EHH27899.1| hypothetical protein EGK_18211 [Macaca mulatta]
Length = 376
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/179 (79%), Positives = 161/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 198 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 257
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 258 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 317
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 318 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA 376
>gi|391336328|ref|XP_003742533.1| PREDICTED: TATA-box-binding protein-like [Metaseiulus occidentalis]
Length = 295
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 160/177 (90%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ ++NIVSTVNL C+LDLKKIALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 119 IPQLQNIVSTVNLGCRLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 178
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE QS+LAARKYARI+QKLGF AKF DFKIQN+VGSCDV+FPIRLEGL +H FS
Sbjct: 179 TGAKSEDQSRLAARKYARIVQKLGFEAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHCQFS 238
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L FRK
Sbjct: 239 SYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGFRKT 295
>gi|241949839|ref|XP_002417642.1| TATA sequence-binding protein, putative; TATA-binding factor,
putative; TATA-box binding protein, putative; TATA-box
factor, putative; transcription initiation factor tfIID
TBP subunit, putative [Candida dubliniensis CD36]
gi|223640980|emb|CAX45328.1| TATA sequence-binding protein, putative [Candida dubliniensis CD36]
Length = 233
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
+G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGK
Sbjct: 54 IGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGK 113
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGS DVKF IRLEGLA++HG
Sbjct: 114 MVVTGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHG 173
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE+IYPVL EFRK
Sbjct: 174 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEFRK 232
>gi|351714662|gb|EHB17581.1| TATA-box-binding protein [Heterocephalus glaber]
Length = 300
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 121 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 180
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS ARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 181 VCTGAKSEEQSSRLARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 240
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 241 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 299
>gi|402876253|ref|XP_003901890.1| PREDICTED: TATA box-binding protein-like protein 2 [Papio anubis]
Length = 376
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 198 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 257
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 258 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 317
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 318 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 375
>gi|238878530|gb|EEQ42168.1| TATA-box binding protein [Candida albicans WO-1]
Length = 238
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 162/179 (90%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
+G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGK
Sbjct: 59 IGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGK 118
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGS DVKF IRLEGLA++HG
Sbjct: 119 MVVTGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHG 178
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE+IYPVL EFRK
Sbjct: 179 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEFRK 237
>gi|355778612|gb|EHH63648.1| hypothetical protein EGM_16656 [Macaca fascicularis]
Length = 376
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 198 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 257
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 258 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 317
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 318 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 375
>gi|109083719|ref|XP_001088740.1| PREDICTED: TATA box-binding protein-like protein 2-like [Macaca
mulatta]
Length = 376
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 198 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 257
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 258 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 317
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 318 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 375
>gi|224051924|ref|XP_002200431.1| PREDICTED: TATA box-binding protein-like protein 2 [Taeniopygia
guttata]
Length = 322
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 143 GIVPQLQNIVSTVNLACKLDLKNIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 202
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 203 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 262
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGL+YRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 263 FSSYEPELFPGLVYRMVKPRIVLLIFVSGKVVLTGAKDRSEIYEAFENIYPILRGFKK 320
>gi|344273811|ref|XP_003408712.1| PREDICTED: TATA box-binding protein-like protein 2-like [Loxodonta
africana]
Length = 344
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 166 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 225
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 226 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 285
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 286 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 343
>gi|3599497|gb|AAC35362.1| TATA-binding protein [Lytechinus variegatus]
Length = 271
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKL+LKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 92 GIVPQLQNIVSTVNLSCKLELKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 151
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYAR++QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 152 VCTGAKSEDDSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 211
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF NIYP+L F+K
Sbjct: 212 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSFKKT 270
>gi|123909816|sp|Q1JPY4.1|TBPL2_DANRE RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|94574475|gb|AAI16554.1| TATA box binding protein like 2 [Danio rerio]
gi|182890344|gb|AAI64097.1| Tbpl2 protein [Danio rerio]
Length = 312
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL C LDLK IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 134 GIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 193
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV FPIRLEGL +H
Sbjct: 194 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLTHQQ 253
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L FRK
Sbjct: 254 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFRK 311
>gi|405124108|gb|AFR98870.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 232
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNP+RFAAV+MRIR+P+TTALIFASGKM
Sbjct: 53 GLVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKM 112
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQN+VGSCDVKFPIRLEGLA+SHGA
Sbjct: 113 VVTGAKSEDDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGA 172
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PK+V+LIFVSGKIV+TGAKVR+E Y AF IY VL EFRK
Sbjct: 173 FSSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVLLEFRKT 231
>gi|346323634|gb|EGX93232.1| TATA-box binding protein [Cordyceps militaris CM01]
Length = 264
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 134
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 135 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 194
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL +FRK
Sbjct: 195 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKA 253
>gi|321264592|ref|XP_003197013.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit) [Cryptococcus gattii WM276]
gi|317463491|gb|ADV25226.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit), putative [Cryptococcus gattii WM276]
Length = 232
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNP+RFAAV+MRIR+P+TTALIFASGKM
Sbjct: 53 GLVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKM 112
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQN+VGSCDVKFPIRLEGLA+SHGA
Sbjct: 113 VVTGAKSEDDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGA 172
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PK+V+LIFVSGKIV+TGAKVR+E Y AF IY VL EFRK
Sbjct: 173 FSSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVLLEFRKT 231
>gi|47550887|ref|NP_999961.1| TATA box-binding protein-like protein 2 [Danio rerio]
gi|32765839|gb|AAP87373.1| TATA-binding protein 2 [Danio rerio]
Length = 312
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL C LDLK IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 134 GIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 193
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV FPIRLEGL +H
Sbjct: 194 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLTHQQ 253
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L FRK
Sbjct: 254 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFRK 311
>gi|195425556|ref|XP_002061064.1| GK10649 [Drosophila willistoni]
gi|194157149|gb|EDW72050.1| GK10649 [Drosophila willistoni]
Length = 351
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 172 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 231
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 232 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFMDFKIQNMVGSCDVKFPIRLEGLVLTHCN 291
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 292 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 349
>gi|255078440|ref|XP_002502800.1| transcription elongation-nucleosome displacement protein
[Micromonas sp. RCC299]
gi|226518066|gb|ACO64058.1| transcription elongation-nucleosome displacement protein
[Micromonas sp. RCC299]
Length = 240
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/179 (79%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV+TVNLDCKLDLK IA ARN EYNPKRFAA IMRIR PKTTALIF+SGKM
Sbjct: 36 GIVPQLQNIVATVNLDCKLDLKTIAFHARNVEYNPKRFAAAIMRIRAPKTTALIFSSGKM 95
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAK+E ++ AARKYA++I KLGFPA+FKDFKIQN+VGSCDVKFPIRLEGLA+SHG
Sbjct: 96 VCTGAKTEALAREAARKYAKVISKLGFPAQFKDFKIQNMVGSCDVKFPIRLEGLAWSHGH 155
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F+ YEPELFPGLIYRM+ PKIVLLIFVSGKIV+TG K RD+ Y AFENIYPVLTEFRK+
Sbjct: 156 FAQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLTGGKNRDDIYKAFENIYPVLTEFRKL 214
>gi|58270288|ref|XP_572300.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134117708|ref|XP_772488.1| hypothetical protein CNBL1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255102|gb|EAL17841.1| hypothetical protein CNBL1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228558|gb|AAW44993.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 232
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 162/179 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNP+RFAAV+MRIR+P+TTALIFASGKM
Sbjct: 53 GLVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKM 112
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQN+VGSCDVKFPIRLEGLA+SHGA
Sbjct: 113 VVTGAKSEDDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGA 172
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PK+V+LIFVSGKIV+TGAKVR+E Y AF IY VL EFRK
Sbjct: 173 FSSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVLLEFRKT 231
>gi|302663669|ref|XP_003023473.1| hypothetical protein TRV_02367 [Trichophyton verrucosum HKI 0517]
gi|291187474|gb|EFE42855.1| hypothetical protein TRV_02367 [Trichophyton verrucosum HKI 0517]
Length = 275
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 158/176 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 77 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 136
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 137 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 196
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT
Sbjct: 197 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLT 252
>gi|149642959|ref|NP_001092323.1| TATA box-binding protein-like protein 2 [Gallus gallus]
gi|148910849|tpg|DAA06035.1| TPA_inf: TATA box binding protein-like 2 [Gallus gallus]
Length = 328
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 149 GIVPQLQNIVSTVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 208
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 209 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 268
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 269 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILRGFKK 326
>gi|326921220|ref|XP_003206860.1| PREDICTED: TATA box-binding protein-like protein 2-like [Meleagris
gallopavo]
Length = 328
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 149 GIVPQLQNIVSTVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 208
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 209 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 268
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 269 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILRGFKK 326
>gi|195380351|ref|XP_002048934.1| Tbp [Drosophila virilis]
gi|194143731|gb|EDW60127.1| Tbp [Drosophila virilis]
Length = 351
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 172 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 231
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 232 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 291
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 292 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 349
>gi|194881988|ref|XP_001975095.1| GG20753 [Drosophila erecta]
gi|190658282|gb|EDV55495.1| GG20753 [Drosophila erecta]
Length = 349
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 170 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 229
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 230 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 289
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 290 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 347
>gi|154284482|ref|XP_001543036.1| TATA-box binding protein [Ajellomyces capsulatus NAm1]
gi|150406677|gb|EDN02218.1| TATA-box binding protein [Ajellomyces capsulatus NAm1]
Length = 268
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/177 (83%), Positives = 159/177 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 82 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 141
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA++KYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 142 KMVVTGAKSEDDSKLASKKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRH 201
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLTE
Sbjct: 202 HNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTE 258
>gi|195403015|ref|XP_002060091.1| GJ14917 [Drosophila virilis]
gi|194149413|gb|EDW65108.1| GJ14917 [Drosophila virilis]
Length = 352
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 173 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 232
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 233 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 292
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 293 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 350
>gi|194755930|ref|XP_001960232.1| GF11627 [Drosophila ananassae]
gi|190621530|gb|EDV37054.1| GF11627 [Drosophila ananassae]
Length = 348
Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 169 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 228
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 229 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 288
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 289 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 346
>gi|125807343|ref|XP_001360369.1| GA22088 [Drosophila pseudoobscura pseudoobscura]
gi|195149788|ref|XP_002015837.1| GL11271 [Drosophila persimilis]
gi|54635541|gb|EAL24944.1| GA22088 [Drosophila pseudoobscura pseudoobscura]
gi|194109684|gb|EDW31727.1| GL11271 [Drosophila persimilis]
Length = 345
Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 166 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 225
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 226 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 285
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 286 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 343
>gi|195057981|ref|XP_001995362.1| GH23121 [Drosophila grimshawi]
gi|193899568|gb|EDV98434.1| GH23121 [Drosophila grimshawi]
Length = 348
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 169 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 228
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 229 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 288
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 289 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 346
>gi|1016266|gb|AAA79092.1| TATA-box binding protein [Drosophila melanogaster]
Length = 354
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 175 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 234
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 235 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 294
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 295 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 352
>gi|47551211|ref|NP_999786.1| TATA-box-binding protein [Strongylocentrotus purpuratus]
gi|3122940|sp|P91809.1|TBP_STRPU RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|1840134|gb|AAB47272.1| TATA binding protein [Strongylocentrotus purpuratus]
Length = 265
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 142/179 (79%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL+C+LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 86 GIVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 145
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAK E S+LAARKYAR++QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 146 VCTGAKREDNSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 205
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF NIYP+L F+K
Sbjct: 206 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSFKKT 264
>gi|195346517|ref|XP_002039804.1| GM15696 [Drosophila sechellia]
gi|194135153|gb|EDW56669.1| GM15696 [Drosophila sechellia]
Length = 352
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 173 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 232
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 233 VCTGAKSEDSSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 292
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 293 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 350
>gi|17647997|ref|NP_523805.1| TATA binding protein [Drosophila melanogaster]
gi|135636|sp|P20227.1|TBP_DROME RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|158532|gb|AAA28926.1| TATA-consensus-binding transcription factor TFII [Drosophila
melanogaster]
gi|158542|gb|AAA28931.1| TATA-box binding protein [Drosophila melanogaster]
gi|515665|gb|AAA68629.1| TATA-box binding protein [Drosophila melanogaster]
gi|7291324|gb|AAF46754.1| TATA binding protein [Drosophila melanogaster]
gi|17862662|gb|AAL39808.1| LD44083p [Drosophila melanogaster]
gi|220942262|gb|ACL83674.1| Tbp-PA [synthetic construct]
gi|220952470|gb|ACL88778.1| Tbp-PA [synthetic construct]
Length = 353
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 174 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 233
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 234 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 293
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 294 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 351
>gi|195585514|ref|XP_002082526.1| GD25175 [Drosophila simulans]
gi|194194535|gb|EDX08111.1| GD25175 [Drosophila simulans]
Length = 352
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 173 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 232
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 233 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 292
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 293 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 350
>gi|195486396|ref|XP_002091492.1| GE13685 [Drosophila yakuba]
gi|194177593|gb|EDW91204.1| GE13685 [Drosophila yakuba]
Length = 349
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 170 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 229
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 230 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 289
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 290 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 347
>gi|68490865|ref|XP_710759.1| hypothetical protein CaO19.9395 [Candida albicans SC5314]
gi|68490947|ref|XP_710721.1| hypothetical protein CaO19.1837 [Candida albicans SC5314]
gi|3334374|sp|O43133.1|TBP_CANAL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|2708495|gb|AAC49985.1| TATA-binding protein [Candida albicans]
gi|2708497|gb|AAC49986.1| TATA-binding protein [Candida albicans]
gi|46431958|gb|EAK91473.1| hypothetical protein CaO19.1837 [Candida albicans SC5314]
gi|46432000|gb|EAK91511.1| hypothetical protein CaO19.9395 [Candida albicans SC5314]
Length = 238
Score = 301 bits (771), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 160/176 (90%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMV
Sbjct: 62 VPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVV 121
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGS DVKF IRLEGLA++HG FS
Sbjct: 122 TGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTFS 181
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R+E Y AFE+IYPVL EFRK
Sbjct: 182 SYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEFRK 237
>gi|396467023|ref|XP_003837823.1| similar to transcription initiation factor TFIID [Leptosphaeria
maculans JN3]
gi|312214387|emb|CBX94379.1| similar to transcription initiation factor TFIID [Leptosphaeria
maculans JN3]
Length = 246
Score = 301 bits (771), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTAL+FASGKM
Sbjct: 68 GIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKM 127
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 128 VVTGAKSEDDSRLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHT 187
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 188 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 245
>gi|335280289|ref|XP_001924325.3| PREDICTED: TATA box-binding protein-like protein 2-like [Sus
scrofa]
Length = 379
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/178 (78%), Positives = 161/178 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKR AAVIMRIREP+TTALIF+SGKM
Sbjct: 201 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRLAAVIMRIREPRTTALIFSSGKM 260
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LA+RKYAR++QKLGFPA+F +FKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 261 VCTGAKSEEQSRLASRKYARVVQKLGFPARFLNFKIQNMVGSCDVRFPIRLEGLVLTHPE 320
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L +F+K
Sbjct: 321 FSSYEPELFPGLIYRMVKPQIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKDFKK 378
>gi|320591748|gb|EFX04187.1| RNA polymerase 1 and 3 transcription factor complex component
[Grosmannia clavigera kw1407]
Length = 265
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 158/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNL C+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 87 GLTPTLQNIVATVNLACRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 146
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFP+RLEGLA H
Sbjct: 147 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPVRLEGLASRHHN 206
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +PKIVLLIFVSGK V+TGAKVR+E Y AFE IYPVL +FRKV
Sbjct: 207 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKTVLTGAKVREEIYQAFEMIYPVLQDFRKV 265
>gi|89267100|emb|CAJ41964.1| TF21_MAIZE Transcription initiation factor TFIID-1 [Ustilago
hordei]
gi|388856434|emb|CCF49983.1| probable TATA-box-binding factor TBP [Ustilago hordei]
Length = 239
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/180 (80%), Positives = 161/180 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 59 VHGIVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 118
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDV+FPIRLEGLAYSH
Sbjct: 119 KMVVTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSH 178
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G +SSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF I PVL EFRK
Sbjct: 179 GVYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVLAEFRK 238
>gi|71012922|ref|XP_758541.1| transcription initiation factor TFIID-1 [Ustilago maydis 521]
gi|46098199|gb|EAK83432.1| TF21_MAIZE Transcription initiation factor TFIID-1 (TATA-box factor
1) (TATA sequence-binding protein 1) (TBP-1) [Ustilago
maydis 521]
Length = 189
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/180 (80%), Positives = 161/180 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 9 VHGIVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDV+FPIRLEGLAYSH
Sbjct: 69 KMVVTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSH 128
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G +SSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF I PVL EFRK
Sbjct: 129 GVYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVLAEFRK 188
>gi|169606198|ref|XP_001796519.1| hypothetical protein SNOG_06135 [Phaeosphaeria nodorum SN15]
gi|160706937|gb|EAT85966.2| hypothetical protein SNOG_06135 [Phaeosphaeria nodorum SN15]
Length = 247
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTAL+FASGKM
Sbjct: 69 GIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKM 128
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 129 VVTGAKSEDDSRLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHT 188
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 189 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 246
>gi|229577173|ref|NP_001153317.1| TATA binding protein [Nasonia vitripennis]
Length = 306
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/176 (80%), Positives = 159/176 (90%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ V+NIVSTVNL+ KLDLKKIAL ARNAE+ PKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 130 LPQVQNIVSTVNLNGKLDLKKIALHARNAEFIPKRFAAVIMRIREPRTTALIFSSGKMVC 189
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H FS
Sbjct: 190 TGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQFS 249
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+NIYP+L F+K
Sbjct: 250 SYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKK 305
>gi|348573495|ref|XP_003472526.1| PREDICTED: TATA box-binding protein-like protein 2-like [Cavia
porcellus]
Length = 397
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 219 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 278
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+F IRLEGL +H
Sbjct: 279 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQ 338
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 339 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKSFKK 396
>gi|343427608|emb|CBQ71135.1| probable TATA-box-binding factor TBP [Sporisorium reilianum SRZ2]
Length = 241
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/180 (80%), Positives = 161/180 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 61 VHGIVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 120
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDV+FPIRLEGLAYSH
Sbjct: 121 KMVVTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSH 180
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G +SSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF I PVL EFRK
Sbjct: 181 GVYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVLAEFRK 240
>gi|444728605|gb|ELW69055.1| TATA box-binding protein-like protein 2 [Tupaia chinensis]
Length = 378
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/176 (80%), Positives = 160/176 (90%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 202 VPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 261
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H FS
Sbjct: 262 TGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFS 321
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
SYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 322 SYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKVFKK 377
>gi|451854730|gb|EMD68022.1| hypothetical protein COCSADRAFT_156488 [Cochliobolus sativus
ND90Pr]
gi|452000886|gb|EMD93346.1| hypothetical protein COCHEDRAFT_1153946 [Cochliobolus
heterostrophus C5]
Length = 249
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTAL+FASGKM
Sbjct: 71 GIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKM 130
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF DFKIQNIVGSCD++FPIRLEGLA H
Sbjct: 131 VVTGAKSEDDSRLASRKYARIIQKLGFSAKFTDFKIQNIVGSCDIRFPIRLEGLASRHHT 190
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 191 FSSYEPELFPGLIYRMMKPRIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 248
>gi|195122370|ref|XP_002005684.1| GI18943 [Drosophila mojavensis]
gi|193910752|gb|EDW09619.1| GI18943 [Drosophila mojavensis]
Length = 348
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK+IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 169 GIVPQLQNIVSTVNLCCKLDLKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 228
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 229 VCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCN 288
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AF+ I+P+L +F+K
Sbjct: 289 FSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 346
>gi|297695161|ref|XP_002824816.1| PREDICTED: TATA box-binding protein-like protein 2 [Pongo abelii]
Length = 375
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 197 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 256
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+F IRLEGL +H
Sbjct: 257 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQ 316
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 317 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
>gi|189192825|ref|XP_001932751.1| TATA-box-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330941403|ref|XP_003306059.1| hypothetical protein PTT_19076 [Pyrenophora teres f. teres 0-1]
gi|187978315|gb|EDU44941.1| TATA-box-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311316652|gb|EFQ85856.1| hypothetical protein PTT_19076 [Pyrenophora teres f. teres 0-1]
Length = 249
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTAL+FASGKM
Sbjct: 71 GIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKM 130
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF DFKIQNIVGSCD++FPIRLEGLA H
Sbjct: 131 VVTGAKSEDDSRLASRKYARIIQKLGFSAKFTDFKIQNIVGSCDIRFPIRLEGLASRHHT 190
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL++FRK
Sbjct: 191 FSSYEPELFPGLIYRMMKPRIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRK 248
>gi|121705502|ref|XP_001271014.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus clavatus NRRL 1]
gi|119399160|gb|EAW09588.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus clavatus NRRL 1]
Length = 273
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/174 (83%), Positives = 157/174 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 86 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 145
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 146 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 205
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+
Sbjct: 206 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLS 259
>gi|443895156|dbj|GAC72502.1| hypothetical protein PANT_7d00127 [Pseudozyma antarctica T-34]
Length = 238
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/180 (80%), Positives = 161/180 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 58 VHGIVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 117
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDV+FPIRLEGLAYSH
Sbjct: 118 KMVVTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSH 177
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G +SSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E Y AF I PVL EFRK
Sbjct: 178 GVYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVLAEFRK 237
>gi|134083254|emb|CAK46825.1| unnamed protein product [Aspergillus niger]
gi|350633630|gb|EHA21995.1| hypothetical protein ASPNIDRAFT_210581 [Aspergillus niger ATCC
1015]
Length = 282
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 84 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 143
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 144 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 203
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+ +
Sbjct: 204 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSGMHR 261
>gi|296215093|ref|XP_002807283.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-like
protein 2 [Callithrix jacchus]
Length = 373
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 160/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 195 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 254
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGA+SE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 255 VCTGARSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 314
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E AFENIYP+L F+K
Sbjct: 315 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEICEAFENIYPILKGFKK 372
>gi|303283248|ref|XP_003060915.1| transcription elongation-nucleosome displacement protein
[Micromonas pusilla CCMP1545]
gi|226457266|gb|EEH54565.1| transcription elongation-nucleosome displacement protein
[Micromonas pusilla CCMP1545]
Length = 249
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/179 (78%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDCKLDLK IA ARN EYNPKRFAA IMRIR PKTTALIF+SGKM
Sbjct: 41 GIVPTLQNIVATVNLDCKLDLKTIAFHARNVEYNPKRFAAAIMRIRAPKTTALIFSSGKM 100
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAK+E ++ AARKYA++I KLGFPA+FK+FKIQN+VGSCDVKFPIRLEGLA+SHG
Sbjct: 101 VCTGAKTEALAREAARKYAKVISKLGFPAQFKEFKIQNMVGSCDVKFPIRLEGLAWSHGH 160
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F+ YEPELFPGLIYRM PKIVLLIFVSGKIV+TG K R++ Y AFENIYPVLTEFRKV
Sbjct: 161 FAQYEPELFPGLIYRMVVPKIVLLIFVSGKIVLTGGKKREDIYQAFENIYPVLTEFRKV 219
>gi|55583664|gb|AAV53354.1| TATA-box binding protein [Volvox carteri f. nagariensis]
Length = 340
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 159/180 (88%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G ++N+V+TVNL KLDLK+IA+ ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 30 VSGITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASG 89
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMVCTGAKSE S+ AAR+YA+I+QKLGFPA FK+FKIQNIVGSCDVKFPIRLEGLAY+H
Sbjct: 90 KMVCTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGLAYAH 149
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F+SYEPELFPGLIYRMKQPKIVLLIFVSGK+V+TGAK R E Y A+ NIYP L +++K
Sbjct: 150 SLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRYEIYQAYMNIYPTLIQYKK 209
>gi|259482151|tpe|CBF76358.1| TPA: TATA-box-binding protein (TATA-box factor)(TATA-binding
factor)(TATA sequence-binding
protein)(TBP)(Transcription initiation factor TFIID TBP
subunit) [Source:UniProtKB/Swiss-Prot;Acc:Q12731]
[Aspergillus nidulans FGSC A4]
Length = 284
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/174 (83%), Positives = 157/174 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 90 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 149
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 150 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 209
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+
Sbjct: 210 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLS 263
>gi|70999782|ref|XP_754608.1| RNA polymerase I and III transcription factor complex component Tbp
[Aspergillus fumigatus Af293]
gi|66852245|gb|EAL92570.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus fumigatus Af293]
gi|159127621|gb|EDP52736.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus fumigatus A1163]
Length = 283
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/174 (83%), Positives = 157/174 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 86 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 145
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 146 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 205
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+
Sbjct: 206 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLS 259
>gi|322698718|gb|EFY90486.1| TATA binding protein [Metarhizium acridum CQMa 102]
Length = 260
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 160/186 (86%), Gaps = 7/186 (3%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPK-------RFAAVIMRIREPKTTAL 63
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPK RFAAVIMRIREPKTTAL
Sbjct: 75 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKMLTFDPKRFAAVIMRIREPKTTAL 134
Query: 64 IFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEG 123
IFASGKMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEG
Sbjct: 135 IFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEG 194
Query: 124 LAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
LA H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL
Sbjct: 195 LASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 254
Query: 184 TEFRKV 189
+FRKV
Sbjct: 255 QDFRKV 260
>gi|378727024|gb|EHY53483.1| TATA-box-binding protein [Exophiala dermatitidis NIH/UT8656]
Length = 268
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/176 (82%), Positives = 157/176 (89%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 80 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 139
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 140 KMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKH 199
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYP L+
Sbjct: 200 HPFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEQIYPTLS 255
>gi|1174643|sp|P46272.1|TBP_ACECL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|2654376|emb|CAA82267.1| TATA box binding protein [Acetabularia peniculus]
Length = 191
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++N+VSTVNL C L+LK+IA+QARNAEYNPKRFAAVIMRIR+PKTTALIF SGKM
Sbjct: 13 GIIPELQNVVSTVNLGCTLELKEIAMQARNAEYNPKRFAAVIMRIRDPKTTALIFGSGKM 72
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSEQ S+ AARKYA+I+QKLGFPAKF +FKIQNIVGSCDVKFPIR+E LAY H
Sbjct: 73 VCTGAKSEQDSRTAARKYAKIVQKLGFPAKFTEFKIQNIVGSCDVKFPIRMEPLAYQHQQ 132
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F SYEPELFPGLIYRM QPKIVLLIFVSGK+V+TGAK R E Y AFE IYPVLT+FRK
Sbjct: 133 FCSYEPELFPGLIYRMLQPKIVLLIFVSGKVVLTGAKERTEIYRAFEQIYPVLTQFRK 190
>gi|79313217|ref|NP_001030688.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|332641835|gb|AEE75356.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
Length = 196
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/158 (92%), Positives = 151/158 (95%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH A
Sbjct: 80 VCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAA 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKV 168
FSSYEPELFPGLIYRMK PKIVLLIFVSGKIVITGAKV
Sbjct: 140 FSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKV 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+QNIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V TG
Sbjct: 25 LQNIVSTVNLDCKLDLKAIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 83
Query: 166 AKVRD 170
AK D
Sbjct: 84 AKSED 88
>gi|159465587|ref|XP_001691004.1| global transcription factor [Chlamydomonas reinhardtii]
gi|158279690|gb|EDP05450.1| global transcription factor [Chlamydomonas reinhardtii]
Length = 325
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 159/180 (88%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G ++N+V+TVNL KLDLK+IA+ ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 26 VSGIKPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASG 85
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMVCTGAKSE S+ AAR+YA+I+QKLGFPA FK+FKIQNIVGSCDVKFPIRLEGLAY+H
Sbjct: 86 KMVCTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGLAYAH 145
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F+SYEPELFPGLIYRMKQPKIVLLIFVSGK+V+TGAK R E Y A+ NIYP L +++K
Sbjct: 146 SLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRGEIYQAYMNIYPTLIQYKK 205
>gi|67537612|ref|XP_662580.1| TF22_MAIZE Transcription initiation factor TFIID-2 (TATA-box factor
2) (TATA sequence-binding protein 2) (TBP-2)
[Aspergillus nidulans FGSC A4]
gi|40741864|gb|EAA61054.1| TF22_MAIZE Transcription initiation factor TFIID-2 (TATA-box factor
2) (TATA sequence-binding protein 2) (TBP-2)
[Aspergillus nidulans FGSC A4]
Length = 211
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/174 (83%), Positives = 157/174 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 17 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 76
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 77 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 136
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL+
Sbjct: 137 FSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLS 190
>gi|431895824|gb|ELK05242.1| TATA box-binding protein-like protein 2 [Pteropus alecto]
Length = 342
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/178 (78%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVST NL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 164 GIMPQLQNIVSTANLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 223
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+F IRLEGL +H
Sbjct: 224 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQ 283
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 284 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 341
>gi|353234891|emb|CCA66911.1| probable TATA-box-binding factor TBP [Piriformospora indica DSM
11827]
Length = 297
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV+TVNL +LDLK IA+ ARNAEYNPKRFAAVIMRIREPKTTALIFASG+M
Sbjct: 119 GIVPILQNIVATVNLGTRLDLKTIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASGQM 178
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF AKF +FKIQNIVGSCDVKFPIRLEGL Y HG
Sbjct: 179 VVTGAKSEDDSRLASRKYARIIQKLGFDAKFTEFKIQNIVGSCDVKFPIRLEGLHYGHGK 238
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E YTAF IYPVL EF+K
Sbjct: 239 FSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNVIYPVLREFKK 296
>gi|443688559|gb|ELT91221.1| hypothetical protein CAPTEDRAFT_209597 [Capitella teleta]
Length = 209
Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV TVN+ CKL+LK+IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 31 GIVPQLQNIVCTVNMACKLELKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 90
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE Q+KLAARKYARI+QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 91 VCTGAKSEDQAKLAARKYARIVQKLGFEAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSQ 150
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L F+K
Sbjct: 151 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFKK 208
>gi|380491274|emb|CCF35436.1| TATA-box-binding protein [Colletotrichum higginsianum]
Length = 304
Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 155/173 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 80 GLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 139
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H
Sbjct: 140 VVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHN 199
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL
Sbjct: 200 FSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 252
>gi|291403917|ref|XP_002718356.1| PREDICTED: TATA box binding protein like 2-like [Oryctolagus
cuniculus]
Length = 345
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/180 (78%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 166 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 225
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLG+PA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 226 VCTGAKSEEQSRLAARKYARVVQKLGYPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQ 285
Query: 131 F-SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 286 FSSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA 345
>gi|242039091|ref|XP_002466940.1| hypothetical protein SORBIDRAFT_01g017130 [Sorghum bicolor]
gi|241920794|gb|EER93938.1| hypothetical protein SORBIDRAFT_01g017130 [Sorghum bicolor]
Length = 225
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/182 (78%), Positives = 165/182 (90%), Gaps = 1/182 (0%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNL CKLDL++IA ARNAEYNPKRFAAVI+RIR+PKTTAL+FASGKM
Sbjct: 41 GFVPTLQNIVSTVNLGCKLDLQQIASGARNAEYNPKRFAAVIVRIRDPKTTALVFASGKM 100
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
VCTGAKSE+ S+LA RK+ARI+ KLGF A+FKDFKIQNIVGSCDVKFPIRLEGLA + G
Sbjct: 101 VCTGAKSEEHSRLAGRKFARIVHKLGFQSARFKDFKIQNIVGSCDVKFPIRLEGLALASG 160
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F++YEPE+FPGLIYRM +PKIV+LIFVSGKIV+TGAKVR+E YTAFENIYP+L +FRK
Sbjct: 161 TFANYEPEIFPGLIYRMVEPKIVILIFVSGKIVLTGAKVREEIYTAFENIYPMLVQFRKR 220
Query: 190 QQ 191
QQ
Sbjct: 221 QQ 222
>gi|145352509|ref|XP_001420584.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580819|gb|ABO98877.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 226
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/181 (76%), Positives = 159/181 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV+TVNLDCKLDLK IA ARN EYNPKRFAA IMRIR PKTTALIF+SGKM
Sbjct: 28 GIVPVLQNIVATVNLDCKLDLKTIAFHARNVEYNPKRFAAAIMRIRNPKTTALIFSSGKM 87
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAK+E ++ AARKYA++I KLGFPA+FKDFKIQN+VGSCDV+FPIRLEGLA+ HG
Sbjct: 88 VCTGAKTEALAREAARKYAKVIIKLGFPAQFKDFKIQNMVGSCDVQFPIRLEGLAWQHGH 147
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
F+ YEPELFPGLIYRM+ PKIVLLIFVSGKIV+TG K R++ Y AFENIYPVLTEF+K+
Sbjct: 148 FAQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLTGGKRREDIYQAFENIYPVLTEFKKLA 207
Query: 191 Q 191
Q
Sbjct: 208 Q 208
>gi|74095979|ref|NP_001027845.1| TATA box-binding protein-like protein 2 [Takifugu rubripes]
gi|82127187|sp|Q6SJ94.1|TBPL2_FUGRU RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|38569213|gb|AAR24283.1| TBP-related factor 3 [Takifugu rubripes]
gi|148910851|tpg|DAA06036.1| TPA_inf: TATA box binding protein-like 2 [Takifugu rubripes]
Length = 322
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL C LDLK IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 144 GIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 203
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+V SCDV FPIRLEGL +H
Sbjct: 204 VCTGAKSEEQSRLAARKYARVVQKLGFPARFMDFKIQNMVASCDVCFPIRLEGLVLTHQQ 263
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L FRK
Sbjct: 264 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENIYPILRGFRK 321
>gi|338726931|ref|XP_001496050.2| PREDICTED: TATA box-binding protein-like protein 2-like [Equus
caballus]
Length = 555
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 158/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDLKKIALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGK+
Sbjct: 377 GTVPQLQNVVSTANLACKLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKI 436
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGA+SE+QS+LAARK+AR+IQKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H
Sbjct: 437 VCTGARSEEQSRLAARKFARVIQKLGFPARFLDFKIQNLVGSCDVRFPIRLEGLVLTHQQ 496
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SYEPELFPGLIYRM P++VLLIFVSGK+V+TGAK R E Y AF+NIYP+L F K
Sbjct: 497 FCSYEPELFPGLIYRMVNPRVVLLIFVSGKVVLTGAKERSEIYEAFKNIYPILKNFEKA 555
>gi|440897977|gb|ELR49561.1| TATA box-binding protein-like protein 2, partial [Bos grunniens
mutus]
Length = 374
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 196 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 255
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DF IQN+V SCDV+FPI LEGL +H
Sbjct: 256 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQ 315
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R + Y AFENIYP+L F+K
Sbjct: 316 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPILKGFKK 373
>gi|302833409|ref|XP_002948268.1| TATA-box binding protein [Volvox carteri f. nagariensis]
gi|300266488|gb|EFJ50675.1| TATA-box binding protein [Volvox carteri f. nagariensis]
Length = 338
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 159/180 (88%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G ++N+V+TVNL KLDLK+IA+ ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 5 VSGITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASG 64
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMVCTGAKSE S+ AAR+YA+I+QKLGFPA FK+FKIQNIVGSCDVKFPIRLEGLAY+H
Sbjct: 65 KMVCTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGLAYAH 124
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F+SYEPELFPGLIYRMKQPKIVLLIFVSGK+V+TGAK R E Y A+ NIYP L +++K
Sbjct: 125 SLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRYEIYQAYMNIYPTLIQYKK 184
>gi|297479762|ref|XP_002690959.1| PREDICTED: TATA box binding protein like 2 [Bos taurus]
gi|296483126|tpg|DAA25241.1| TPA: TATA box binding protein like 2-like [Bos taurus]
Length = 341
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 163 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 222
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DF IQN+V SCDV+FPI LEGL +H
Sbjct: 223 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQ 282
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R + Y AFENIYP+L F+K
Sbjct: 283 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPILKGFKK 340
>gi|426234189|ref|XP_004011082.1| PREDICTED: TATA box-binding protein-like protein 2 [Ovis aries]
Length = 443
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 138/179 (77%), Positives = 158/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 265 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 324
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DF IQN+V SCDV+FPI LEGL +H
Sbjct: 325 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQ 384
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R + Y AFENIYP+L F+K
Sbjct: 385 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPILKGFKKA 443
>gi|126282854|ref|XP_001376601.1| PREDICTED: TATA box-binding protein-like protein 2-like
[Monodelphis domestica]
Length = 342
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 138/179 (77%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 164 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 223
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARK+AR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLE L +H
Sbjct: 224 VCTGAKSEELSRLAARKFARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLESLVLTHQQ 283
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGL+YRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 284 FSSYEPELFPGLVYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA 342
>gi|194670970|ref|XP_871896.3| PREDICTED: TATA box binding protein like 2 [Bos taurus]
Length = 377
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 199 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 258
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DF IQN+V SCDV+FPI LEGL +H
Sbjct: 259 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQ 318
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R + Y AFENIYP+L F+K
Sbjct: 319 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPILKGFKK 376
>gi|47214810|emb|CAF89637.1| unnamed protein product [Tetraodon nigroviridis]
Length = 309
Score = 295 bits (756), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL C LDLK IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 131 GIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 190
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+V SCDV FPIRLEGL +H
Sbjct: 191 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVASCDVCFPIRLEGLVLTHQQ 250
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L FRK
Sbjct: 251 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENIYPILRGFRK 308
>gi|345803952|ref|XP_853710.2| PREDICTED: TATA box binding protein like 2 [Canis lupus familiaris]
Length = 431
Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 253 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 312
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+F I LEGL +H
Sbjct: 313 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFAISLEGLVLTHQQ 372
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 373 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 430
>gi|348539536|ref|XP_003457245.1| PREDICTED: TATA box-binding protein-like protein 2-like
[Oreochromis niloticus]
Length = 319
Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NIVSTVNL C LDLK IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 141 GIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 200
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPA+F +FKIQN+V SCDV FPIRLEGL +H
Sbjct: 201 VCTGAKSEEQSRLAARKYARVVQKLGFPARFLEFKIQNMVASCDVCFPIRLEGLVLTHQQ 260
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L FRK
Sbjct: 261 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENIYPILKGFRK 318
>gi|17298080|dbj|BAB78514.1| TATA-box binding protein [Ephydatia fluviatilis]
Length = 281
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 156/180 (86%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
+G ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIR+P+TTAL+F+SGK
Sbjct: 102 IGIEPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALVFSSGK 161
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MVCTGAKSE S+LAARKYARIIQKLGFPA+F +FKIQN+VGSCDVKFPIRLEGL H
Sbjct: 162 MVCTGAKSEDLSRLAARKYARIIQKLGFPARFMEFKIQNMVGSCDVKFPIRLEGLVVQHS 221
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E AF NIYP+L F+K
Sbjct: 222 QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERTEIIEAFHNIYPILKNFKKT 281
>gi|349602909|gb|AEP98902.1| TATA-box-binding protein-like protein, partial [Equus caballus]
Length = 169
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/166 (83%), Positives = 153/166 (92%)
Query: 23 VNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSK 82
VNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+
Sbjct: 2 VNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSR 61
Query: 83 LAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGL 142
LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H FSSYEPELFPGL
Sbjct: 62 LAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGL 121
Query: 143 IYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
IYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 122 IYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 167
>gi|300701392|ref|XP_002994966.1| hypothetical protein NCER_102344 [Nosema ceranae BRL01]
gi|239603310|gb|EEQ81295.1| hypothetical protein NCER_102344 [Nosema ceranae BRL01]
Length = 199
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/179 (78%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++N+V+TVNL+CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGK+
Sbjct: 21 GITPILQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKV 80
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+QSKLAA++Y++II KLGF A F DFKIQNIV SCD KF IRLEGLAYSH
Sbjct: 81 VITGAKSEKQSKLAAQRYSKIINKLGFNADFNDFKIQNIVSSCDTKFSIRLEGLAYSHSN 140
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AFENIYPVLT+++K
Sbjct: 141 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFENIYPVLTQYKKT 199
>gi|296482511|tpg|DAA24626.1| TPA: TBP protein-like [Bos taurus]
Length = 303
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 154/177 (87%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V + N+V TVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TTAL+F+SGKMVC
Sbjct: 126 VPQLHNVVCTVNLGCKLDLKSIALLARNAEYNPKRFAAVIMRIREPRTTALLFSSGKMVC 185
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TG KSE+QS+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLE L SH F+
Sbjct: 186 TGGKSEEQSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEPLVLSHQQFA 245
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
SYEPELFPGL+YRM +P+IVLLIFVSGK+V+TGAKVR E Y AF NIY +L FRK
Sbjct: 246 SYEPELFPGLVYRMIKPRIVLLIFVSGKVVLTGAKVRSEIYEAFNNIYSILKGFRKT 302
>gi|429964398|gb|ELA46396.1| TATA-box-binding protein [Vavraia culicis 'floridensis']
Length = 201
Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/175 (79%), Positives = 157/175 (89%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V+TVNL+C+L+LK IAL+ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMV TG
Sbjct: 27 TLQNVVATVNLECRLELKVIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVITG 86
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSEQ S++AA+KYARII KLGF +F DFKIQNIV SCD KF IRLEGLAY+H F SY
Sbjct: 87 AKSEQASRIAAKKYARIIHKLGFNTQFSDFKIQNIVSSCDTKFNIRLEGLAYAHSNFCSY 146
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
EPELFPGLIYRM PKIVLLIFVSGKIV+TGAKVRDE Y AFENIYPVLT++RK
Sbjct: 147 EPELFPGLIYRMVNPKIVLLIFVSGKIVLTGAKVRDEIYQAFENIYPVLTKYRKT 201
>gi|330846314|ref|XP_003294984.1| TATA-binding protein [Dictyostelium purpureum]
gi|325074431|gb|EGC28489.1| TATA-binding protein [Dictyostelium purpureum]
Length = 224
Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVN+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF SGKM
Sbjct: 40 GIIPTLQNIVSTVNMATELDLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKM 99
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE SK AARKYARIIQKL FPA+F DFKIQNIVGSCDVKFPI+LE L +H +
Sbjct: 100 VCTGAKSEDASKYAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTS 159
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F++YEPE+FPGLIY+M QPK+VLLIFVSGKIV+TGAKVR+E Y AFENIYPVLT F+K
Sbjct: 160 FTNYEPEIFPGLIYKMIQPKVVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLTAFKK 217
>gi|44969211|gb|AAS49602.1| TATA box-binding protein [Scyliorhinus canicula]
Length = 253
Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/167 (82%), Positives = 153/167 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 87 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 146
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGA+SE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 147 VCTGARSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 206
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 177
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFE
Sbjct: 207 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFE 253
>gi|255552716|ref|XP_002517401.1| TATA-box binding protein, putative [Ricinus communis]
gi|223543412|gb|EEF44943.1| TATA-box binding protein, putative [Ricinus communis]
Length = 190
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/172 (80%), Positives = 155/172 (90%), Gaps = 1/172 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNLDCKLDLK IAL +RN+EYNP+RF+AVIMR+R+PKTTAL+FASGKMVCTGA
Sbjct: 17 LQNIVSTVNLDCKLDLKDIALHSRNSEYNPRRFSAVIMRLRDPKTTALLFASGKMVCTGA 76
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSY 134
KSE QSK+AARKYARI+QKLGFPAKFKDFKIQNIV SCDV F IRLE YS H AFSSY
Sbjct: 77 KSEAQSKIAARKYARIVQKLGFPAKFKDFKIQNIVASCDVNFRIRLEKFVYSKHAAFSSY 136
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE+FPG+IYRM +PKIV+LIFVSGKIVITGAK R++TY AF NIYPVL F
Sbjct: 137 EPEIFPGMIYRMTKPKIVMLIFVSGKIVITGAKTREDTYAAFTNIYPVLAGF 188
>gi|66819952|ref|XP_643633.1| TATA-binding protein [Dictyostelium discoideum AX4]
gi|166210407|sp|P26355.2|TBP_DICDI RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|60471603|gb|EAL69559.1| TATA-binding protein [Dictyostelium discoideum AX4]
Length = 205
Score = 291 bits (745), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 159/180 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVN+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF SGKM
Sbjct: 22 GIIPTLQNIVSTVNMATELDLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKM 81
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+ AARKYARIIQKL FPA+F DFKIQNIVGSCDVKFPI+LE L +H +
Sbjct: 82 VCTGAKSEDASRFAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTS 141
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
F++YEPE+FPGLIY+M QPK+VLLIFVSGKIV+TGAKVR+E Y AFENIYPVL+ F+KV
Sbjct: 142 FTNYEPEIFPGLIYKMIQPKVVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLSAFKKVN 201
>gi|449278063|gb|EMC86030.1| TATA-box-binding protein [Columba livia]
Length = 301
Score = 291 bits (745), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/179 (78%), Positives = 156/179 (87%), Gaps = 2/179 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 124 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 183
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEG
Sbjct: 184 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGXXXXKKM 243
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 244 L--YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 300
>gi|46128099|ref|XP_388603.1| hypothetical protein FG08427.1 [Gibberella zeae PH-1]
Length = 290
Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/183 (79%), Positives = 156/183 (85%), Gaps = 6/183 (3%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPK------RFAAVIMRIREPKTTALI 64
G +++NIV+TVNLDC+LDLK IAL ARNAEYNPK RFAAVIMRIREPKTTALI
Sbjct: 76 GITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKVHQTLRRFAAVIMRIREPKTTALI 135
Query: 65 FASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 124
FASGKMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGL
Sbjct: 136 FASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGL 195
Query: 125 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
A H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVL
Sbjct: 196 ASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQ 255
Query: 185 EFR 187
R
Sbjct: 256 GLR 258
>gi|198427023|ref|XP_002127120.1| PREDICTED: similar to TATA-box binding protein [Ciona intestinalis]
Length = 356
Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 138/174 (79%), Positives = 155/174 (89%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNLD KLDLK+IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 182 LQNIVSTVNLDTKLDLKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 241
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE S+LAARKYAR++QKLGFPAKF DFKIQN+VGS DVKFPIRLEGL +H FSSYE
Sbjct: 242 KSENASRLAARKYARVVQKLGFPAKFIDFKIQNMVGSVDVKFPIRLEGLVLAHSQFSSYE 301
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAKV +E AF NIYP+L +RK
Sbjct: 302 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVYNEIEEAFNNIYPILKGYRKT 355
>gi|328870425|gb|EGG18799.1| TATA-binding protein [Dictyostelium fasciculatum]
Length = 236
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/180 (78%), Positives = 157/180 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVN+ +L+LK IAL A NAEYNPKRFAAVIMRIR+PKTTALIF SGKM
Sbjct: 46 GIVPVLQNIVSTVNMGTELNLKTIALGALNAEYNPKRFAAVIMRIRDPKTTALIFKSGKM 105
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ SKLAARKYARIIQKL FPA FKDFKIQNIVGSCDVKFPIRLE L +H
Sbjct: 106 VCTGAKSEEASKLAARKYARIIQKLDFPAIFKDFKIQNIVGSCDVKFPIRLENLNNAHKV 165
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
F++YEPE+FPGLIY+M QPK+VLLIFVSGKIV+TGAKVR+E Y AFENIYPVL FRK Q
Sbjct: 166 FTNYEPEIFPGLIYKMIQPKVVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLNSFRKPQ 225
>gi|440494309|gb|ELQ76708.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Trachipleistophora hominis]
Length = 234
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/175 (79%), Positives = 157/175 (89%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V+TVNL+C+L+LK IAL+ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMV TG
Sbjct: 60 TLQNVVATVNLECRLELKVIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVITG 119
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSEQ S++AA+KYARII KLGF +F DFKIQNIV SCD KF IRLEGLAY+H F SY
Sbjct: 120 AKSEQASRIAAKKYARIIHKLGFNTQFSDFKIQNIVSSCDTKFNIRLEGLAYAHSNFCSY 179
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
EPELFPGLIYRM PKIVLLIFVSGKIV+TGAKVRDE Y AFENIYPVLT++RK
Sbjct: 180 EPELFPGLIYRMVNPKIVLLIFVSGKIVLTGAKVRDEIYQAFENIYPVLTKYRKT 234
>gi|340371811|ref|XP_003384438.1| PREDICTED: TATA-box-binding protein-like [Amphimedon queenslandica]
Length = 291
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 157/180 (87%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
+G + ++NIVSTV L CKLDLK IAL+ARNAEYNPKRFAAVIMRIR+P+TTAL+F+SGK
Sbjct: 111 MGIIPQLQNIVSTVTLGCKLDLKDIALRARNAEYNPKRFAAVIMRIRDPRTTALVFSSGK 170
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MVCTGAKSE S+LAARKYARIIQKLGFPAKF +FKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 171 MVCTGAKSEDFSRLAARKYARIIQKLGFPAKFLEFKIQNMVGSCDVKFPIRLEGLVVAHS 230
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R + AF NIYP+L F+K
Sbjct: 231 QFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKERSQIIEAFNNIYPILKNFKKT 290
>gi|396081293|gb|AFN82911.1| eukaryotic TATA box binding transcription initiation factor TFIID-1
[Encephalitozoon romaleae SJ-2008]
Length = 198
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 159/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++N+V+TVNL+CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ SK+AA++YA+II KLGF A F DFKIQNIV SCD+KF IRLEGLAY+H
Sbjct: 80 VITGAKSEKSSKMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSN 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AF NIYPVL +++K
Sbjct: 140 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQYKKT 198
>gi|401826152|ref|XP_003887170.1| TATA-box binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998328|gb|AFM98189.1| TATA-box binding protein [Encephalitozoon hellem ATCC 50504]
Length = 198
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 159/178 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++N+V+TVNL+CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ SK+AA++YA+II KLGF A F DFKIQNIV SCD+KF IRLEGLAY+H
Sbjct: 80 VITGAKSEKSSKMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSN 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AF NIYPVL +++K
Sbjct: 140 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQYKK 197
>gi|6063008|gb|AAF03091.1|AF144035_1 transcription initiation factor TFIID [Antonospora locustae]
Length = 259
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 159/175 (90%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V+TVNL+CKLDLK IAL+ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMV TG
Sbjct: 85 ALQNVVATVNLNCKLDLKAIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTG 144
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSEQ SKLAA+K++RII KLGF KF DFKIQNIV SCD +F IRLEGLA++H F SY
Sbjct: 145 AKSEQTSKLAAQKFSRIIHKLGFNTKFADFKIQNIVSSCDTQFSIRLEGLAFAHSNFCSY 204
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
EPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK+RDE Y AF+NIYPVLT+++K+
Sbjct: 205 EPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKMRDEIYEAFDNIYPVLTQYKKI 259
>gi|449543430|gb|EMD34406.1| hypothetical protein CERSUDRAFT_97665 [Ceriporiopsis subvermispora
B]
Length = 338
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/201 (73%), Positives = 162/201 (80%), Gaps = 23/201 (11%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPK----------RFAAVIMRIREPKT 60
G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPK RFAAVIMRIR+PKT
Sbjct: 137 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKWPDFRVCALQRFAAVIMRIRDPKT 196
Query: 61 TALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIR 120
TALIFASGKMV TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIR
Sbjct: 197 TALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIR 256
Query: 121 LEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKV------------ 168
LEGLAYSHG FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKV
Sbjct: 257 LEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVKPGFSYREASPP 316
Query: 169 -RDETYTAFENIYPVLTEFRK 188
R+E YTAF IY VL EFRK
Sbjct: 317 SREEIYTAFNTIYTVLCEFRK 337
>gi|303389118|ref|XP_003072792.1| eukaryotic TATA box binding transcription initiation factor TFIID-1
[Encephalitozoon intestinalis ATCC 50506]
gi|303301934|gb|ADM11432.1| eukaryotic TATA box binding transcription initiation factor TFIID-1
[Encephalitozoon intestinalis ATCC 50506]
Length = 198
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++N+V+TVNL+CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ S++AA++YA+II KLGF A F DFKIQNIV SCD+KF IRLEGLAY+H
Sbjct: 80 VITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSN 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AF NIYPVL + RK
Sbjct: 140 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYRAFNNIYPVLIQHRK 197
>gi|19074223|ref|NP_584829.1| TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1 [Encephalitozoon
cuniculi GB-M1]
gi|19068865|emb|CAD25333.1| TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1 [Encephalitozoon
cuniculi GB-M1]
gi|449329027|gb|AGE95302.1| transcription initiation factor tfIId [Encephalitozoon cuniculi]
Length = 198
Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 157/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++N+V+TVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 20 GIIPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 79
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ S++AA++YA+II KLGF A F DFKIQNIV SCD+KF IRLEGLAY+H
Sbjct: 80 VITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSN 139
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AF NIYPVL + RK
Sbjct: 140 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQHRK 197
>gi|339961266|pdb|3OC3|C Chain C, Crystal Structure Of The Mot1 N-Terminal Domain In Complex
With Tbp
gi|339961267|pdb|3OC3|D Chain D, Crystal Structure Of The Mot1 N-Terminal Domain In Complex
With Tbp
gi|339961268|pdb|3OCI|A Chain A, Crystal Structure Of Tbp (Tata Box Binding Protein)
gi|339961269|pdb|3OCI|B Chain B, Crystal Structure Of Tbp (Tata Box Binding Protein)
Length = 218
Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 157/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++N+V+TVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 40 GIIPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 99
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ S++AA++YA+II KLGF A F DFKIQNIV SCD+KF IRLEGLAY+H
Sbjct: 100 VITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSN 159
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AF NIYPVL + RK
Sbjct: 160 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQHRK 217
>gi|259090139|pdb|3EIK|A Chain A, Double Stranded Dna Binding Protein
gi|259090140|pdb|3EIK|B Chain B, Double Stranded Dna Binding Protein
Length = 218
Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 157/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++N+V+TVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 40 GIIPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 99
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ S++AA++YA+II KLGF A F DFKIQNIV SCD+KF IRLEGLAY+H
Sbjct: 100 VITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSN 159
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRD+ Y AF NIYPVL + RK
Sbjct: 160 YCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQHRK 217
>gi|307109595|gb|EFN57833.1| hypothetical protein CHLNCDRAFT_20778 [Chlorella variabilis]
Length = 209
Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 156/178 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+V+TVNL+CKLDLK IAL ARNAEYNPKRFAAVIMRIREPK+TALIF SGKM
Sbjct: 26 GIVPQLQNVVATVNLECKLDLKNIALHARNAEYNPKRFAAVIMRIREPKSTALIFHSGKM 85
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTG KSEQ++++A+RKYA+I+QKL + FK+FKIQN+VGSCDVKFPIRLEGLA +H
Sbjct: 86 VCTGTKSEQEARIASRKYAKILQKLQYSVSFKEFKIQNMVGSCDVKFPIRLEGLASTHAV 145
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F SYEPELFPGLIYRM PKIVLLIFVSGK+V+TGAK R++ Y AFENIYPVL FRK
Sbjct: 146 FCSYEPELFPGLIYRMADPKIVLLIFVSGKVVLTGAKKREDIYRAFENIYPVLQTFRK 203
>gi|358335036|dbj|GAA53489.1| transcription initiation factor TFIID TATA-box-binding protein
[Clonorchis sinensis]
Length = 436
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/173 (79%), Positives = 156/173 (90%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV TV L CKL+LK+IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 247 LQNIVCTVYLGCKLNLKQIALSARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 306
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE++++LAARKYARIIQKLGF A FK+FKIQN+VGSCDV+F IRLEGL + G F++YE
Sbjct: 307 KSEERARLAARKYARIIQKLGFEAHFKEFKIQNMVGSCDVRFHIRLEGLVLAQGQFATYE 366
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVRDE Y AF NIYP+L FRK
Sbjct: 367 PELFPGLIYRMTKPKIVLLIFVSGKIVLTGAKVRDEIYEAFRNIYPILKNFRK 419
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L Q + A Y P+ F +I R+ +PK LIF SGK+V TG
Sbjct: 337 IQNMVGSCDVRFHIRLEGLVLAQGQFATYEPELFPGLIYRMTKPKIVLLIFVSGKIVLTG 396
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAK 100
AK + A R I++ P K
Sbjct: 397 AKVRDEIYEAFRNIYPILKNFRKPDK 422
>gi|302508189|ref|XP_003016055.1| hypothetical protein ARB_05452 [Arthroderma benhamiae CBS 112371]
gi|291179624|gb|EFE35410.1| hypothetical protein ARB_05452 [Arthroderma benhamiae CBS 112371]
Length = 295
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/200 (73%), Positives = 158/200 (79%), Gaps = 24/200 (12%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPK---------------------- 46
+ G V +++NIV+TVNLDC+LDLK IAL ARNAEYNPK
Sbjct: 77 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKVGAGEVACLLFSFHTQVKIYIL 136
Query: 47 --RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF 104
RFAAVIMRIREPKTTALIFASGKMV TGAKSE SKLA+RKYARIIQKLGF AKF DF
Sbjct: 137 FVRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDF 196
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KIQNIVGSCD+KFPIRLEGLA H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+T
Sbjct: 197 KIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLT 256
Query: 165 GAKVRDETYTAFENIYPVLT 184
GAKVR+E Y AFE IYPVLT
Sbjct: 257 GAKVREEIYQAFEMIYPVLT 276
>gi|256089271|ref|XP_002580736.1| TATA-box binding protein [Schistosoma mansoni]
gi|350646100|emb|CCD59202.1| TATA-box binding protein, putative [Schistosoma mansoni]
Length = 271
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 156/176 (88%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++NIV TV L CKL+LK IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 77 VPQLQNIVCTVYLGCKLNLKNIALSARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 136
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE+Q++LAARKYARIIQ+LGF A FK+FKIQN+VGSCDV+F IRLEGL S G F+
Sbjct: 137 TGAKSEEQARLAARKYARIIQRLGFEAHFKEFKIQNMVGSCDVRFHIRLEGLVLSQGQFA 196
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+YEPELFPGLIYRM +PKIVLL+FVSGKIV+TGAKVR+E Y AF NIYP+L F+K
Sbjct: 197 TYEPELFPGLIYRMTKPKIVLLVFVSGKIVLTGAKVREEIYEAFNNIYPILKNFKK 252
>gi|44967798|gb|AAS49578.1| TATA box binding protein (TBP)-associated factor [Protopterus
dolloi]
Length = 250
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/163 (82%), Positives = 150/163 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 88 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 147
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 148 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 207
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETY 173
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y
Sbjct: 208 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIY 250
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 92 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 150
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 151 GAKSEEQSRLA 161
>gi|290994623|ref|XP_002679931.1| TATA-box binding protein [Naegleria gruberi]
gi|284093550|gb|EFC47187.1| TATA-box binding protein [Naegleria gruberi]
Length = 318
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 155/178 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++N+VSTVNL C+L LK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF SGKM
Sbjct: 130 GIIPVIQNVVSTVNLACELKLKMIALHARNAEYNPKRFAAVIMRIREPKTTALIFQSGKM 189
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE++S+LAARKYARIIQKLGF AKF +FKIQNIVGSCDV FP+RLEGL H +
Sbjct: 190 VVTGAKSEEESRLAARKYARIIQKLGFNAKFTEFKIQNIVGSCDVGFPVRLEGLNCQHHS 249
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
++SYEPE+FPGLIYRM PK+VLLIFVSGKIV+TGAK RD Y AF+NIYPVL +F+K
Sbjct: 250 YASYEPEIFPGLIYRMVDPKVVLLIFVSGKIVLTGAKHRDTIYQAFQNIYPVLRDFKK 307
>gi|72679753|gb|AAI00306.1| TATA box binding protein like 2 [Mus musculus]
gi|148910845|tpg|DAA06033.1| TPA_inf: TATA box binding protein-like 2 [Mus musculus]
gi|219520477|gb|AAI44905.1| Tbpl2 protein [Mus musculus]
Length = 349
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 158/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDL+KIAL A+N EYNPKRFAAVIMRIREP+TTALIF+SGK+
Sbjct: 171 GIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKV 230
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE++S+LAARKYAR++QKLGFP +F +FKIQN+VGSCDVKFPIRLE LA +H
Sbjct: 231 VCTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQ 290
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIY+M +P++VLLIF SGK+V+TGAK R E Y AFEN+YP+L F+KV
Sbjct: 291 FSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV 349
>gi|148676212|gb|EDL08159.1| TBP-related factor 3 [Mus musculus]
Length = 208
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 158/179 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDL+KIAL A+N EYNPKRFAAVIMRIREP+TTALIF+SGK+
Sbjct: 30 GIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKV 89
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE++S+LAARKYAR++QKLGFP +F +FKIQN+VGSCDVKFPIRLE LA +H
Sbjct: 90 VCTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQ 149
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIY+M +P++VLLIF SGK+V+TGAK R E Y AFEN+YP+L F+KV
Sbjct: 150 FSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV 208
>gi|424513557|emb|CCO66179.1| predicted protein [Bathycoccus prasinos]
Length = 289
Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 161/213 (75%), Gaps = 33/213 (15%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPK------------------------ 46
G V +++NIV+TVNLDCKLDLK IA ARN EYNPK
Sbjct: 45 GIVPTLQNIVATVNLDCKLDLKTIAFHARNVEYNPKVCRAVGGKEIVKTDAFLHHSFHQT 104
Query: 47 ---------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 97
RFAA IMRIR PKTTALIFASGKMVCTGAK+E ++ AARKYA++I KLGF
Sbjct: 105 FRCALLNKQRFAAAIMRIRNPKTTALIFASGKMVCTGAKTEALAREAARKYAKVIIKLGF 164
Query: 98 PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFV 157
PA+FKDFKIQN+VGSCDVKFPIRLEGLA+SHG F+ YEPELFPGLIYRM+ PKIVLLIFV
Sbjct: 165 PAQFKDFKIQNMVGSCDVKFPIRLEGLAWSHGHFAQYEPELFPGLIYRMQMPKIVLLIFV 224
Query: 158 SGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
SGKIV+TG K R++ Y AFENIYPVLTEF+K+Q
Sbjct: 225 SGKIVLTGGKRREDIYQAFENIYPVLTEFKKLQ 257
>gi|429962646|gb|ELA42190.1| TATA-box-binding protein [Vittaforma corneae ATCC 50505]
Length = 197
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/179 (75%), Positives = 160/179 (89%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++N+V+TVNL+CKLDL+ IAL+ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKM
Sbjct: 19 GITPVLQNVVATVNLNCKLDLRSIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKM 78
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE+ SK+A+++YA+II KLGF A+F DFKIQNIV SCD+KF I+LEGLAY+H
Sbjct: 79 VVTGAKSEKASKMASQRYAKIISKLGFNAQFTDFKIQNIVSSCDLKFCIKLEGLAYAHSN 138
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR++ Y AF+NIYPVLT++RK
Sbjct: 139 FCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREDIYEAFDNIYPVLTQYRKT 197
>gi|413933837|gb|AFW68388.1| hypothetical protein ZEAMMB73_647229, partial [Zea mays]
Length = 189
Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 158/178 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIVSTVNLDCK+DL+ +A ARNAEYNP+RF A IMRIREPKTTALIFA+GKM
Sbjct: 12 GIVPNLQNIVSTVNLDCKVDLQHVANSARNAEYNPRRFGAAIMRIREPKTTALIFATGKM 71
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+LAARK+ARI+QKLGFPA+FKDFK+QNIVGSCD+KFPIRLEGLA + G
Sbjct: 72 VCTGAKSEADSRLAARKFARIVQKLGFPARFKDFKVQNIVGSCDLKFPIRLEGLALASGL 131
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
++YEPE+FPGL+YRM PK+V+L+FVSGKIV+TGAKV++E AFE I+P+L +FRK
Sbjct: 132 SATYEPEIFPGLVYRMVDPKVVILVFVSGKIVLTGAKVQEEICAAFEKIHPMLVQFRK 189
>gi|150247085|ref|NP_001092831.1| TATA box-binding protein-like protein 2 [Rattus norvegicus]
gi|166987367|sp|A6H909.1|TBPL2_RAT RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|148910847|tpg|DAA06034.1| TPA_inf: TATA box binding protein-like 2 [Rattus norvegicus]
Length = 344
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 156/179 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDL+KIAL A+N EYNPKRFAAVIMRIREP+TTALIF+SGK+
Sbjct: 166 GIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKV 225
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE +S+LAARKYAR++QKLGFP +F +FKIQN+V SCDVKFPIRLE LA +H
Sbjct: 226 VCTGAKSEDESRLAARKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRLEILALTHRQ 285
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIY+M +P++VLLIF SGK+V+TGAK R E Y AFEN+YP+L F+KV
Sbjct: 286 FSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV 344
>gi|167899|gb|AAA33256.1| TFIID [Dictyostelium discoideum]
Length = 205
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 157/180 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIVSTVN+ +L LK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF SGKM
Sbjct: 22 GIIPTLQNIVSTVNMATELYLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKM 81
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE S+ AARKYARIIQKL FPA+F DFKIQNIVGSCDVKFPI+LE L +H +
Sbjct: 82 VCTGAKSEDASRFAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTS 141
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
F++YEPE+FPGLIY+M QPK++LLIFVSGKIV+TGAKVR+ Y AFENIYPVL+ F+KV
Sbjct: 142 FTNYEPEIFPGLIYKMIQPKVLLLIFVSGKIVLTGAKVREYIYEAFENIYPVLSAFKKVN 201
>gi|149039452|gb|EDL93672.1| rCG45623 [Rattus norvegicus]
Length = 190
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 156/179 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDL+KIAL A+N EYNPKRFAAVIMRIREP+TTALIF+SGK+
Sbjct: 12 GIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKV 71
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE +S+LAARKYAR++QKLGFP +F +FKIQN+V SCDVKFPIRLE LA +H
Sbjct: 72 VCTGAKSEDESRLAARKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRLEILALTHRQ 131
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
FSSYEPELFPGLIY+M +P++VLLIF SGK+V+TGAK R E Y AFEN+YP+L F+KV
Sbjct: 132 FSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV 190
>gi|339251280|ref|XP_003373123.1| TATA-box-binding protein [Trichinella spiralis]
gi|316968993|gb|EFV53163.1| TATA-box-binding protein [Trichinella spiralis]
Length = 260
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 133/176 (75%), Positives = 154/176 (87%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++NIVSTVNL CKLDLK+IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 84 VPQLQNIVSTVNLGCKLDLKQIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 143
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE S+LAARKYARI+QKLGF AKF DFK+QN+VGSCDV+FPI+LE +H FS
Sbjct: 144 TGAKSEDLSRLAARKYARIVQKLGFDAKFMDFKVQNMVGSCDVRFPIQLESFCLTHSQFS 203
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+YEPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF +IYP+L FRK
Sbjct: 204 AYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKEKRDIDEAFTSIYPILKSFRK 259
>gi|308809792|ref|XP_003082205.1| transcription initiation factor tbp1-maize (ISS) [Ostreococcus
tauri]
gi|116060673|emb|CAL57151.1| transcription initiation factor tbp1-maize (ISS) [Ostreococcus
tauri]
Length = 258
Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/196 (69%), Positives = 156/196 (79%), Gaps = 21/196 (10%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPK---------------------RFAAVIMRI 55
+NIV+TVNLDCKLDLK IA ARN EYNPK RFAA IMRI
Sbjct: 50 RNIVATVNLDCKLDLKTIAFHARNVEYNPKVRRATRAPTLGEPTRRDENDFRFAAAIMRI 109
Query: 56 REPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDV 115
R PKTTALIF+SGKMVCTGAK+E ++ AARKYA++I KLGFPA+FKDFKIQN+VGSCDV
Sbjct: 110 RNPKTTALIFSSGKMVCTGAKTEALAREAARKYAKVIIKLGFPAQFKDFKIQNMVGSCDV 169
Query: 116 KFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+FPIRLEGLA+ HG F+ YEPELFPGLIYRM+ PKIVLLIFVSGKIV+TG K R++ Y A
Sbjct: 170 QFPIRLEGLAWQHGHFAQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLTGGKRREDIYQA 229
Query: 176 FENIYPVLTEFRKVQQ 191
FENIYPVLTEF+K+ Q
Sbjct: 230 FENIYPVLTEFKKLAQ 245
>gi|39979630|ref|NP_951014.1| TATA box-binding protein-like protein 2 [Mus musculus]
gi|81870779|sp|Q6SJ95.1|TBPL2_MOUSE RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|38569211|gb|AAR24282.1| TBP-related factor 3 [Mus musculus]
gi|111600530|gb|AAI19161.1| TATA box binding protein like 2 [Mus musculus]
Length = 350
Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 158/180 (87%), Gaps = 1/180 (0%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDL+KIAL A+N EYNPKRFAAVIMRIREP+TTALIF+SGK+
Sbjct: 171 GIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKV 230
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE++S+LAARKYAR++QKLGFP +F +FKIQN+VGSCDVKFPIRLE LA +H
Sbjct: 231 VCTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQ 290
Query: 131 F-SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SSYEPELFPGLIY+M +P++VLLIF SGK+V+TGAK R E Y AFEN+YP+L F+KV
Sbjct: 291 FSSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV 350
>gi|297478910|ref|XP_002690449.1| PREDICTED: TATA-box-binding protein, partial [Bos taurus]
gi|296483816|tpg|DAA25931.1| TPA: TATA box binding protein-like [Bos taurus]
Length = 227
Score = 281 bits (719), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/162 (83%), Positives = 151/162 (93%), Gaps = 1/162 (0%)
Query: 11 GAV-SSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
GAV ++ +NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGK
Sbjct: 66 GAVHNTTENIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 125
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
MVCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 126 MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ 185
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E
Sbjct: 186 QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAE 227
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 107 QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGA 166
+NIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V TGA
Sbjct: 73 ENIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 131
Query: 167 KVRDETYTA 175
K +++ A
Sbjct: 132 KSEEQSRLA 140
>gi|260830471|ref|XP_002610184.1| hypothetical protein BRAFLDRAFT_121529 [Branchiostoma floridae]
gi|229295548|gb|EEN66194.1| hypothetical protein BRAFLDRAFT_121529 [Branchiostoma floridae]
Length = 320
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 150/169 (88%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIR+P+TTALIF+SGKM
Sbjct: 152 GIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKM 211
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 212 VCTGAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQ 271
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGA+ ET + ++
Sbjct: 272 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAQACAETLGEWHSL 320
>gi|44967740|gb|AAS49577.1| TATA box binding protein (TBP)-associated factor [Latimeria
chalumnae]
Length = 249
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 148/163 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 87 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 146
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 147 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 206
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETY 173
SSYEPELFPGLIYRM +P+IVLL FVSGK+V+TGAKVR E Y
Sbjct: 207 SSSYEPELFPGLIYRMIKPRIVLLXFVSGKVVLTGAKVRAEIY 249
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 91 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 149
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 150 GAKSEEQSRLA 160
>gi|413933536|gb|AFW68087.1| TATA-binding protein2 [Zea mays]
Length = 139
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/139 (97%), Positives = 139/139 (100%)
Query: 53 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS
Sbjct: 1 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 60
Query: 113 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDET 172
CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ET
Sbjct: 61 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREET 120
Query: 173 YTAFENIYPVLTEFRKVQQ 191
YTAFENIYPVL+EFRK+QQ
Sbjct: 121 YTAFENIYPVLSEFRKIQQ 139
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V TG
Sbjct: 54 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 113
Query: 75 AKSEQQSKLA 84
AK +++ A
Sbjct: 114 AKVREETYTA 123
>gi|309252549|gb|ADO60139.1| TATA-binding protein, partial [Beauveria bassiana]
Length = 159
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 144/159 (90%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV TGAKS
Sbjct: 1 NIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKS 60
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
E SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA H FSSYEPE
Sbjct: 61 EDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPE 120
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAF 176
LFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y A
Sbjct: 121 LFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAL 159
>gi|354503979|ref|XP_003514057.1| PREDICTED: TATA box-binding protein-like protein 2-like [Cricetulus
griseus]
Length = 350
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 157/180 (87%), Gaps = 1/180 (0%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++N+VST NL CKLDL+KIAL A+N EYNPKRFAAVIMRIREP+TTAL+F+SGK+
Sbjct: 171 GIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALLFSSGKV 230
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE++S+LAARKYAR++QKLGFP KF +FKIQN+VGSCDVKFPIRLE LA +H
Sbjct: 231 VCTGAKSEEESRLAARKYARVVQKLGFPVKFFNFKIQNMVGSCDVKFPIRLEILALTHRQ 290
Query: 131 F-SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F SSYEPELFPGLIY+M +P++VLLIF SGK+V+TGAK R E Y AFEN+YP+L F+K
Sbjct: 291 FSSSYEPELFPGLIYKMVRPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKT 350
>gi|324518621|gb|ADY47156.1| TATA-box-binding protein, partial [Ascaris suum]
Length = 384
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/174 (74%), Positives = 153/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 211 ALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 270
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +FK+QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 271 AKSEEASRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFSTY 330
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 331 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKFKKDIDDAFNQIYPILKGFKK 384
>gi|312069027|ref|XP_003137490.1| TATA-box binding protein [Loa loa]
gi|307767348|gb|EFO26582.1| TATA-box binding protein [Loa loa]
Length = 369
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/174 (74%), Positives = 153/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 196 ALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 255
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +FK+QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 256 AKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFSTY 315
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 316 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGFKK 369
>gi|170591981|ref|XP_001900748.1| TATA-box binding protein [Brugia malayi]
gi|158591900|gb|EDP30503.1| TATA-box binding protein, putative [Brugia malayi]
Length = 347
Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 130/174 (74%), Positives = 153/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 174 ALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 233
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +FK+QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 234 AKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFSTY 293
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 294 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGFKK 347
>gi|402470285|gb|EJW04618.1| TATA-box-binding protein [Edhazardia aedis USNM 41457]
Length = 198
Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 134/174 (77%), Positives = 151/174 (86%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V+TVNL L L+ IA + RNAEYNPKRFAAVIMRIREPKTTALIF+SGKMV TGA
Sbjct: 25 IQNVVATVNLGHHLTLQDIAYKTRNAEYNPKRFAAVIMRIREPKTTALIFSSGKMVVTGA 84
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE S AARK+ARIIQK GFPAKFKD+KIQNIV SCD+KF +RLEGLA+ HG + SYE
Sbjct: 85 KSEASSMFAARKFARIIQKAGFPAKFKDYKIQNIVSSCDIKFNVRLEGLAFMHGPYCSYE 144
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PELFPGLIYRM +PKIVLLIFVSGKIVITGAK R+E Y AFE+IYPVLT+ RKV
Sbjct: 145 PELFPGLIYRMVKPKIVLLIFVSGKIVITGAKAREEIYQAFESIYPVLTQHRKV 198
>gi|341900545|gb|EGT56480.1| CBN-TBP-1 protein [Caenorhabditis brenneri]
Length = 337
Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 153/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL +LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 164 ALQNIVSTVNLGVQLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 223
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +F +QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 224 AKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFSTY 283
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 284 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKKDIDDAFGQIYPILKGFKK 337
>gi|428176634|gb|EKX45518.1| hypothetical protein GUITHDRAFT_152740 [Guillardia theta CCMP2712]
Length = 212
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 153/180 (85%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G S++NIV+TVNL+C L+LK I LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 25 GITPSLQNIVATVNLNCSLNLKTITLQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 84
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ ++LA+RK+ARIIQKLGF AKF +FKIQNIVGSCDV+FPIRLE LAY+H
Sbjct: 85 VCTGAKSEESARLASRKFARIIQKLGFSAKFTEFKIQNIVGSCDVRFPIRLEKLAYAHQN 144
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
+ SYEPELFPGLIYRM PK+VLLIFVSGKIV+TGAK + + AF IY L EF+ V
Sbjct: 145 YCSYEPELFPGLIYRMLVPKVVLLIFVSGKIVLTGAKNKRDIDIAFRTIYHTLHEFKNVS 204
>gi|169806112|ref|XP_001827801.1| transcription initiation factor TFIID [Enterocytozoon bieneusi
H348]
gi|161779087|gb|EDQ31113.1| transcription initiation factor TFIID [Enterocytozoon bieneusi
H348]
Length = 233
Score = 278 bits (710), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 156/174 (89%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V+TVNL+CKLDLK IAL ARNAEYNPK+FAAVIMRIREPKTTALIFASGKMV TGA
Sbjct: 60 LQNVVATVNLNCKLDLKSIALHARNAEYNPKKFAAVIMRIREPKTTALIFASGKMVVTGA 119
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE+ S++A+++Y++IIQKLGF F F +QNIV SCD+KFPI+LEGLAY+H + SYE
Sbjct: 120 KSEKASRIASQRYSKIIQKLGFSVYFDSFTVQNIVSSCDLKFPIKLEGLAYAHSNYCSYE 179
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PELFPGLIYRM +PKIVLLIFVSGKIV+TGAK R++ + AFENIYPVLT++RK+
Sbjct: 180 PELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREDIFEAFENIYPVLTQYRKI 233
>gi|443925999|gb|ELU44748.1| transcription initiation factor TFIID-1 [Rhizoctonia solani AG-1
IA]
Length = 985
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/150 (87%), Positives = 141/150 (94%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMV TGAKS
Sbjct: 73 NIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKS 132
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
E S+LA+RKYARI+QKLGF AKF +FKIQNIVGSCDVKFPIRLEGLAYSHG FSSYEPE
Sbjct: 133 EDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPE 192
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
LFPGLIYRM +PK+VLLIFVSGKIV+TGAK
Sbjct: 193 LFPGLIYRMLKPKVVLLIFVSGKIVLTGAK 222
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 108 NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
NIV + ++ + L+ +A H + Y P+ F +I R++ PK LIF SGK+V+TGAK
Sbjct: 73 NIVATVNLDCRLDLKTIAL-HARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAK 131
Query: 168 VRDETYTA 175
D++ A
Sbjct: 132 SEDDSRLA 139
>gi|268575218|ref|XP_002642588.1| C. briggsae CBR-TBP-1 protein [Caenorhabditis briggsae]
Length = 337
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 153/176 (86%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ +++NIVSTVNL LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVC
Sbjct: 162 MPALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 221
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKSE+ S+LAARKYARI+QKLGF AKF +F +QN+VGSCDV+FPI+LEGL +H FS
Sbjct: 222 TGAKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFS 281
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+YEPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 282 TYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKKDIDDAFGQIYPILKGFKK 337
>gi|308467285|ref|XP_003095891.1| CRE-TBP-1 protein [Caenorhabditis remanei]
gi|308244262|gb|EFO88214.1| CRE-TBP-1 protein [Caenorhabditis remanei]
Length = 338
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 152/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 165 ALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 224
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +F +QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 225 AKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFSTY 284
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 285 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKKDIDDAFGQIYPILKGFKK 338
>gi|17555358|ref|NP_498635.1| Protein TBP-1 [Caenorhabditis elegans]
gi|417896|sp|P32085.1|TBP_CAEEL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|12275988|gb|AAG50207.1|AF303249_1 transcription factor TFIID [Caenorhabditis elegans]
gi|156448|gb|AAA03582.1| TATA-box binding protein [Caenorhabditis elegans]
gi|351061293|emb|CCD69071.1| Protein TBP-1 [Caenorhabditis elegans]
Length = 340
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 153/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL +LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 167 ALQNIVSTVNLGVQLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 226
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +F +QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 227 AKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHSQFSTY 286
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 287 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKRDIDEAFGQIYPILKGFKK 340
>gi|395843435|ref|XP_003794490.1| PREDICTED: TATA box-binding protein-like protein 2 [Otolemur
garnettii]
Length = 364
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 155/178 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV T+NL CKLDL++IAL+A+N EYNP+RF+AVIMRIREP+TTALIF+SGK+
Sbjct: 186 GIVPELQNIVCTINLACKLDLREIALRAKNTEYNPQRFSAVIMRIREPRTTALIFSSGKI 245
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARK+AR++QKLGFPA+F DFKI N+VGSCDV FPIRLEGL +H
Sbjct: 246 VCTGAKSEEQSRLAARKFARVVQKLGFPARFLDFKIHNMVGSCDVGFPIRLEGLVLAHQQ 305
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F SYEPELFPGLIYRM +P++V+LIFVSGK+V+ GAK R E Y AFENIY +L F+K
Sbjct: 306 FCSYEPELFPGLIYRMVKPRVVVLIFVSGKVVLAGAKKRSEIYEAFENIYSILKVFKK 363
>gi|440902256|gb|ELR53068.1| TATA-box-binding protein, partial [Bos grunniens mutus]
Length = 247
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/161 (80%), Positives = 144/161 (89%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V + N+V TVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TTAL+F+SGKMVC
Sbjct: 87 VPQLHNVVCTVNLGCKLDLKSIALLARNAEYNPKRFAAVIMRIREPRTTALLFSSGKMVC 146
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TG KSE+QS+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRLE L SH F+
Sbjct: 147 TGGKSEEQSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEPLVLSHQQFA 206
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETY 173
SYEPELFPGL+YRM +P+IVLLIFVSGK+V+TGAKVR E Y
Sbjct: 207 SYEPELFPGLVYRMIKPRIVLLIFVSGKVVLTGAKVRSEIY 247
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++ N+V + ++ + L+ +A + Y P+ F +I R+++P+ L+F SGK+V T
Sbjct: 89 QLHNVVCTVNLGCKLDLKSIAL-LARNAEYNPKRFAAVIMRIREPRTTALLFSSGKMVCT 147
Query: 165 GAKVRDETYTA 175
G K +++ A
Sbjct: 148 GGKSEEQSRLA 158
>gi|14423952|sp|Q9NHP5.1|TBP_DROVI RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|8050582|gb|AAF71711.1|AF220262_1 TATA box-binding protein [Drosophila virilis]
Length = 349
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 150/178 (84%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL ARNAEYNPKRFA VIMRIREP+TTALIF+SGKM
Sbjct: 170 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAPVIMRIREPRTTALIFSSGKM 229
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAK E S+LAARKYARIIQKLGF AKF D KIQN+VG CDVKFPIRLEGL +H
Sbjct: 230 VCTGAKGEDDSRLAARKYARIIQKLGFRAKFLDLKIQNMVGLCDVKFPIRLEGLVLTHCN 289
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FS YEPELFPGLIYRM +P+IVLL+ GK+V+TGAKVR E Y AF+ I+ +L +F+K
Sbjct: 290 FSRYEPELFPGLIYRMVRPRIVLLLPAPGKVVLTGAKVRQEIYDAFDKIFSILKKFKK 347
>gi|294034|gb|AAA16924.1| TATA box-binding protein, partial [Onchocerca volvulus]
Length = 179
Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/174 (74%), Positives = 153/174 (87%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVSTVNL LDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTG
Sbjct: 6 ALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 65
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE+ S+LAARKYARI+QKLGF AKF +FK+QN+VGSCDV+FPI+LEGL +H FS+Y
Sbjct: 66 AKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFSTY 125
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 126 EPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGFKK 179
>gi|387592277|gb|EIJ87301.1| TATA-box binding protein [Nematocida parisii ERTm3]
gi|387596323|gb|EIJ93945.1| TATA-box binding protein [Nematocida parisii ERTm1]
Length = 189
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 156/178 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL C+LDLK IAL ARNAEYNPKRFAAVI+RIR+P+TTALIFASGKM
Sbjct: 11 GLVPTIQNIVATVNLCCRLDLKAIALGARNAEYNPKRFAAVIIRIRKPRTTALIFASGKM 70
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGA+SE+ SK+AA+KY+ II++LG+P +F +FKIQNIV SCD KF IRLEGL + H
Sbjct: 71 VVTGARSEEDSKIAAKKYSIIIRRLGYPVRFTEFKIQNIVSSCDTKFSIRLEGLVFGHSN 130
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+SSYEPELFPGLIYRM +PKIVLL+FVSGK+V+TGAK R+E Y AFENIYPVL ++RK
Sbjct: 131 YSSYEPELFPGLIYRMVKPKIVLLVFVSGKVVLTGAKHREEIYQAFENIYPVLKQYRK 188
>gi|164656154|ref|XP_001729205.1| hypothetical protein MGL_3672 [Malassezia globosa CBS 7966]
gi|159103095|gb|EDP41991.1| hypothetical protein MGL_3672 [Malassezia globosa CBS 7966]
Length = 257
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/157 (82%), Positives = 145/157 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V +++NIV+TVNL+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
Sbjct: 72 GIVPTLQNIVATVNLEARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 131
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE S+LA+RKYARIIQKLGF A+F +FKIQNIVGSCDV+FPIRLEGLAYSHG
Sbjct: 132 VITGAKSEDDSRLASRKYARIIQKLGFEARFSEFKIQNIVGSCDVRFPIRLEGLAYSHGV 191
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
+SSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAK
Sbjct: 192 YSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAK 228
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+QNIV + +++ + L+ +A H + Y P+ F +I R+++PK LIF SGK+VITG
Sbjct: 77 LQNIVATVNLEARLDLKTIAL-HARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVITG 135
Query: 166 AKVRDETYTA 175
AK D++ A
Sbjct: 136 AKSEDDSRLA 145
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + Y P+ F +I R+ +PK LIF SGK+V TG
Sbjct: 167 IQNIVGSCDVRFPIRLEGLAYSHGVYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTG 226
Query: 75 AKS 77
AKS
Sbjct: 227 AKS 229
>gi|405952231|gb|EKC20068.1| TATA-box-binding protein [Crassostrea gigas]
Length = 452
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 148/170 (87%), Gaps = 5/170 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV TVNL CKLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGA
Sbjct: 99 LQNIVCTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 158
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE Q+KLAARKYARI+QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG FSSYE
Sbjct: 159 KSEDQAKLAARKYARIVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 218
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAK-----VRDETYTAFENIY 180
PELFPGLIYRM +P+IVLLIFVSGK+V+TGAK +R E N+Y
Sbjct: 219 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKDWEYAMRREMQEIVPNLY 268
>gi|255579166|ref|XP_002530430.1| TATA-box binding protein, putative [Ricinus communis]
gi|223530038|gb|EEF31961.1| TATA-box binding protein, putative [Ricinus communis]
Length = 193
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/174 (71%), Positives = 153/174 (87%), Gaps = 1/174 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NI STVNLDCKLDLK+IAL + N+EY+PKRF+AV MRIR P+TTALIFASG++VCTGA
Sbjct: 20 LQNIASTVNLDCKLDLKRIALHSLNSEYDPKRFSAVTMRIRHPQTTALIFASGRVVCTGA 79
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSY 134
K+E+ SKLA RK+ARI+QKLGFPAKFKDFKIQNIV SCD+KFP+RLE Y+ H AFS Y
Sbjct: 80 KTEEDSKLAMRKFARIVQKLGFPAKFKDFKIQNIVASCDMKFPLRLEKFIYTKHAAFSRY 139
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EP++FPGLIYRMK+ +I++LIFVSGK+VITGAK DE + AF+NIYPVL F++
Sbjct: 140 EPDVFPGLIYRMKESRIIMLIFVSGKVVITGAKKTDEAFAAFDNIYPVLAGFKR 193
>gi|414864598|tpg|DAA43155.1| TPA: hypothetical protein ZEAMMB73_034825 [Zea mays]
Length = 212
Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 130/199 (65%), Positives = 156/199 (78%), Gaps = 21/199 (10%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPK---------------------RFA 49
G V ++NIVSTVNL+CK+DL+ +A ARNAEYNP+ RFA
Sbjct: 12 GIVPILQNIVSTVNLECKVDLQHVANSARNAEYNPRVCIIISAAAALFFFFFAWNYIRFA 71
Query: 50 AVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNI 109
A IMRIREPKTT LIFASGKMVCTGAKSE S+LAARK+ARI+QKLG PA+FKDFK+QNI
Sbjct: 72 AAIMRIREPKTTTLIFASGKMVCTGAKSEADSRLAARKFARIVQKLGSPARFKDFKVQNI 131
Query: 110 VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVR 169
VGSCD+KFPIRLEGLA + G ++YEPE+FPGL+YRM PK+V+L+FVSGKIV+TGAKVR
Sbjct: 132 VGSCDLKFPIRLEGLALASGLSATYEPEIFPGLVYRMVDPKVVILVFVSGKIVLTGAKVR 191
Query: 170 DETYTAFENIYPVLTEFRK 188
+E AFE I+P+L +FRK
Sbjct: 192 EEICAAFEKIHPMLVQFRK 210
>gi|378401306|emb|CBK13156.1| TATA binding protein, partial [Oreochromis mossambicus]
Length = 247
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/153 (81%), Positives = 142/153 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEY+PKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 95 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYDPKRFAAVIMRIREPRTTALIFSSGKM 154
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VG+CDVKFPIRLEGL +H
Sbjct: 155 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGNCDVKFPIRLEGLVLTHQQ 214
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+
Sbjct: 215 FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVL 247
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y+P+ F +I R+++P+ LIF SGK+V T
Sbjct: 99 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYDPKRFAAVIMRIREPRTTALIFSSGKMVCT 157
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 158 GAKSEEQSRLA 168
>gi|331213275|ref|XP_003319319.1| TATA-box-binding protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298309|gb|EFP74900.1| TATA-box-binding protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 209
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/154 (82%), Positives = 141/154 (91%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G V +++NIV+TVNL+C+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASG
Sbjct: 56 VQGIVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASG 115
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMV TGAKSE S+LAARKYARI+QKLGF AKF +FKIQNIVGSCDV+FPIRLEGLAY+H
Sbjct: 116 KMVVTGAKSEDDSRLAARKYARIVQKLGFEAKFTEFKIQNIVGSCDVRFPIRLEGLAYNH 175
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
G FSSYEPELFPGLIYRM + K+VLLIFVSGKIV
Sbjct: 176 GHFSSYEPELFPGLIYRMNKQKVVLLIFVSGKIV 209
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+QNIV + +++ + L+ +A H + Y P+ F +I R+++PK LIF SGK+V+TG
Sbjct: 63 LQNIVATVNLECRLDLKTIAL-HARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTG 121
Query: 166 AKVRDETYTA 175
AK D++ A
Sbjct: 122 AKSEDDSRLA 131
>gi|320164625|gb|EFW41524.1| Tbpl2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 208
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/187 (70%), Positives = 151/187 (80%), Gaps = 2/187 (1%)
Query: 4 YICYLILGAVSSV-KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTA 62
Y YL V V +N+VST NL LDLK I +QARNAEYNPKRFAAVIMRIREPKTTA
Sbjct: 14 YEDYLRTSVVQPVLQNVVSTANLGVTLDLKTITMQARNAEYNPKRFAAVIMRIREPKTTA 73
Query: 63 LIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRL 121
LIFASGKMVCTGAKSE S+ AARK+A+IIQK+G+ AKF DFKIQN+V SCDVKFPIRL
Sbjct: 74 LIFASGKMVCTGAKSEHDSREAARKFAKIIQKVGYKNAKFLDFKIQNMVASCDVKFPIRL 133
Query: 122 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYP 181
EGL H F+SYEPE+FPGL+Y M PK+VLLIFVSGK+V+TGAK +++ TAF NIY
Sbjct: 134 EGLVLGHSTFASYEPEIFPGLVYHMVSPKVVLLIFVSGKVVLTGAKEKEQITTAFNNIYA 193
Query: 182 VLTEFRK 188
VL E++K
Sbjct: 194 VLKEYKK 200
>gi|402588148|gb|EJW82082.1| TATA box binding protein [Wuchereria bancrofti]
Length = 198
Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 151/178 (84%), Gaps = 4/178 (2%)
Query: 15 SVKNIVSTVNLD----CKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
+++NIVSTVNL C +KIAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 21 ALQNIVSTVNLGESLKCAAGFEKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 80
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ S+LAARKYARI+QKLGF AKF +FK+QN+VGSCDV+FPI+LEGL +H
Sbjct: 81 VCTGAKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQ 140
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FS+YEPELFPGLIYRM +P++VLLIFVSGK+VITGAK + + AF IYP+L F+K
Sbjct: 141 FSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGFKK 198
>gi|399949933|gb|AFP65589.1| TATA binding protein of transcription factor IID [Chroomonas
mesostigmatica CCMP1168]
Length = 262
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/177 (70%), Positives = 149/177 (84%), Gaps = 1/177 (0%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ ++N+VSTVNL +LDLK+IAL+ RNAEYNP+RFAAV+MRIR+PKTTALIF+SGKMV
Sbjct: 85 IPDIQNVVSTVNLGIQLDLKRIALKTRNAEYNPRRFAAVVMRIRDPKTTALIFSSGKMVI 144
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKSE+ +KL +KYARIIQK+G+ KF DFKIQNIV SCD KFPIRLE LA++H F
Sbjct: 145 TGAKSEETAKLGGKKYARIIQKIGYGHIKFLDFKIQNIVASCDTKFPIRLESLAHAHNQF 204
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
SYEPELFPGLIYRM PK+VLLIFVSGK+V+TGAK R++ Y AF NIY VL F+K
Sbjct: 205 CSYEPELFPGLIYRMISPKVVLLIFVSGKLVLTGAKQRNDIYQAFNNIYAVLCLFKK 261
>gi|196001097|ref|XP_002110416.1| hypothetical protein TRIADDRAFT_22173 [Trichoplax adhaerens]
gi|190586367|gb|EDV26420.1| hypothetical protein TRIADDRAFT_22173 [Trichoplax adhaerens]
Length = 220
Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 149/179 (83%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++N+VST NL C L L+ IA +ARNAEYNPKRFAA+IMRIR+PKTTALIF+SGK+VC
Sbjct: 32 VPQIQNVVSTFNLKCSLKLRDIASKARNAEYNPKRFAALIMRIRDPKTTALIFSSGKIVC 91
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
GAKS + S+LAARK+ARIIQKLG+PAKF F+IQNIVGSCDVKF I LEGL +H F
Sbjct: 92 AGAKSPELSRLAARKHARIIQKLGYPAKFTQFQIQNIVGSCDVKFHISLEGLVVTHSHFC 151
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
SYEPELFPGLIYRM QPK+VLL+FVSGKIV+TGAKV ++ AF+ IYP+L F K Q+
Sbjct: 152 SYEPELFPGLIYRMVQPKVVLLVFVSGKIVLTGAKVEEDILEAFKKIYPMLRAFMKPQK 210
>gi|18483230|gb|AAL73974.1|AF466201_3 TATA-binding protein [Sorghum bicolor]
Length = 203
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/169 (79%), Positives = 139/169 (82%), Gaps = 17/169 (10%)
Query: 8 LILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFAS 67
+IL +NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFAS
Sbjct: 52 VILSPRVDFRNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFAS 111
Query: 68 GKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
GKM YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS
Sbjct: 112 GKM-----------------YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS 154
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAF 176
HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAK+ T F
Sbjct: 155 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKMTQVKVTFF 203
>gi|118352110|ref|XP_001009328.1| TATA-box binding protein [Tetrahymena thermophila]
gi|89291095|gb|EAR89083.1| TATA-box binding protein [Tetrahymena thermophila SB210]
Length = 246
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 144/173 (83%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL KLDLK+IAL+ARNAEYNPKRFAAVIMR+R+PKTTALIFASGKMVCTGA
Sbjct: 53 LQNIVSTVNLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMVCTGA 112
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+E+ S AARKYA+IIQK+GFP +FKDFKIQNIVGS DVKFPI L+ L H F YE
Sbjct: 113 KTEEDSNRAARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKFVQYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+FPGLIYR KIVLLIFVSGKIV+TGAK R+ AF+ IY VL ++K
Sbjct: 173 PEIFPGLIYREFNTKIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQK 225
>gi|330038400|ref|XP_003239586.1| TATA binding protein of transcription factor IID [Cryptomonas
paramecium]
gi|327206510|gb|AEA38688.1| TATA binding protein of transcription factor IID [Cryptomonas
paramecium]
Length = 231
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 151/178 (84%), Gaps = 1/178 (0%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ ++N+V+TVNL +LDLK+IA++ARNAE+NP+RFAAVIMRIREPKTTALIF+SGK+V
Sbjct: 54 IPDIQNVVATVNLGIQLDLKRIAIKARNAEFNPRRFAAVIMRIREPKTTALIFSSGKIVV 113
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKSE S++A +KY RIIQ+LG+ AKF +F+IQNIV SCDV+FPIRLE LA++H F
Sbjct: 114 TGAKSEDTSRIACKKYTRIIQRLGYGHAKFLNFRIQNIVASCDVRFPIRLESLAHAHNQF 173
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
SYEPELFPGLIYRM PK+VLLIFVSGK+V+TGAK R + Y AF NIY VL FRK+
Sbjct: 174 CSYEPELFPGLIYRMINPKVVLLIFVSGKLVLTGAKQRKDIYQAFSNIYAVLCLFRKI 231
>gi|160331843|ref|XP_001712628.1| tfIID [Hemiselmis andersenii]
gi|159766077|gb|ABW98303.1| tfIID [Hemiselmis andersenii]
Length = 267
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 150/178 (84%), Gaps = 1/178 (0%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ V+N+VSTV+L +LDLK+IAL+ARNAEYNP+RFAAVIMRIR+PKTTALIF+SGKMV
Sbjct: 90 IPDVQNVVSTVSLGIQLDLKRIALKARNAEYNPRRFAAVIMRIRDPKTTALIFSSGKMVI 149
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKSE+ +KL +KYARIIQ+LG+ KF DF+IQNIV SCDVKFPIRLE LA++H F
Sbjct: 150 TGAKSEEAAKLGCKKYARIIQRLGYGHVKFLDFRIQNIVASCDVKFPIRLESLAHAHNQF 209
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
SYEPELFPGLIYRM PK+VLLIFVSGK+V+TGAK R + Y AF NIY VL F+K
Sbjct: 210 CSYEPELFPGLIYRMITPKVVLLIFVSGKLVLTGAKERKDIYQAFNNIYAVLCLFKKT 267
>gi|162605642|ref|XP_001713336.1| TATA binding protein of transcription factor IID [Guillardia theta]
gi|162605926|ref|XP_001713478.1| TATA binding protein of transcription factor IID [Guillardia theta]
gi|162606298|ref|XP_001713179.1| TATA binding protein of transcription factor IID [Guillardia theta]
gi|6690140|gb|AAF24005.1|AF083031_2 TATA binding protein of transcription factor IID [Guillardia theta]
gi|13794403|gb|AAK39780.1|AF083031_144 TATA binding protein of transcription factor IID [Guillardia theta]
gi|4583657|emb|CAB40395.1| TATA binding protein of transcription factor IID [Guillardia theta]
Length = 249
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 152/176 (86%), Gaps = 1/176 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+VSTV+L +LDLK+IAL+ARNAEYNP+RFAAVIMRIR+PKTTALIF+SGKMV TG
Sbjct: 74 NIQNVVSTVSLGIQLDLKRIALKARNAEYNPRRFAAVIMRIRDPKTTALIFSSGKMVVTG 133
Query: 75 AKSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
AKSE +++A +KYARIIQ+LG+ AKF DF+IQNIV SCDV+FPIRLE LA++H F S
Sbjct: 134 AKSEDSARVACKKYARIIQRLGYGHAKFIDFRIQNIVASCDVRFPIRLESLAHAHNQFCS 193
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPELFPGLIYRM PK+VLLIFVSGK+V+TGAK R++ + AF NIY VL ++K
Sbjct: 194 YEPELFPGLIYRMITPKVVLLIFVSGKLVLTGAKQRNDIFQAFSNIYSVLCLYKKT 249
>gi|3122945|sp|Q27850.1|TBP_TETTH RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|349811|gb|AAC14470.1| TATA-binding protein [Tetrahymena thermophila]
Length = 246
Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 143/173 (82%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL KLDLK+IAL+ARNAEYNPKRFAAVIMR+R+PKTTALIFASGKMVCTGA
Sbjct: 53 LQNIVSTVNLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMVCTGA 112
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+E+ S AARKYA+IIQK+GFP +FKDFKIQNIVGS DVKFPI L+ L H F YE
Sbjct: 113 KTEEDSNRAARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKFVQYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+FPG IYR KIVLLIFVSGKIV+TGAK R+ AF+ IY VL ++K
Sbjct: 173 PEIFPGKIYREFNTKIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQK 225
>gi|63145982|gb|AAY33926.1| TATA box binding protein [Ovis aries]
Length = 141
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/141 (85%), Positives = 133/141 (94%)
Query: 21 STVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQ 80
STVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+Q
Sbjct: 1 STVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 60
Query: 81 SKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFP 140
S+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H FSSYEPELFP
Sbjct: 61 SRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFP 120
Query: 141 GLIYRMKQPKIVLLIFVSGKI 161
GLIYRM +P+IVLLIFVSGK+
Sbjct: 121 GLIYRMIKPRIVLLIFVSGKV 141
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R+++P+ LIF SGK+V TGAK +++ A
Sbjct: 21 AEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLA 64
>gi|313226921|emb|CBY22066.1| unnamed protein product [Oikopleura dioica]
Length = 155
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 139/155 (89%)
Query: 36 LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKL 95
++ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE++S+LAARKYAR+IQKL
Sbjct: 1 MRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEKSRLAARKYARVIQKL 60
Query: 96 GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLI 155
GFPAKFKDFKIQN+VGS DVKF IRLE L +H F+S+EPELFPGL+YRM +PK+VLLI
Sbjct: 61 GFPAKFKDFKIQNMVGSVDVKFAIRLEQLVLNHAQFTSFEPELFPGLVYRMIKPKLVLLI 120
Query: 156 FVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
FVSGK+V+TGAK R E AF NIYP+L +FRK Q
Sbjct: 121 FVSGKVVLTGAKQRKEIDDAFNNIYPILRKFRKQQ 155
>gi|258563652|ref|XP_002582571.1| TATA-box binding protein [Uncinocarpus reesii 1704]
gi|237908078|gb|EEP82479.1| TATA-box binding protein [Uncinocarpus reesii 1704]
Length = 251
Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/168 (76%), Positives = 136/168 (80%), Gaps = 17/168 (10%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+NIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV TGAK
Sbjct: 90 RNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAK 149
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
+ GF AKF DFKIQNIVGSCD+KF IRLEGLA H FSSYEP
Sbjct: 150 NS-----------------GFNAKFTDFKIQNIVGSCDIKFSIRLEGLASRHHNFSSYEP 192
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
ELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E Y AFE IYPVLT
Sbjct: 193 ELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLT 240
>gi|331686250|gb|AED87005.1| tata box binding protein [Stylonychia lemnae]
Length = 285
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 145/174 (83%), Gaps = 1/174 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVST NL KLDL+KIAL RNAEYNPKRFAAVIMRIREPKTTALIF+SGKMVCTGA
Sbjct: 103 LQNIVSTANLGIKLDLRKIALNCRNAEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTGA 162
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KSE+ SK AA+KY++ I+K+GF +DFKIQNIVGSCDV+FPI LE L+ H FS Y
Sbjct: 163 KSEEFSKDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVRFPISLESLSQEHDKFSQY 222
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPE+FPGLIYRM PKIVLLIF SGKIV+TGAK +++ AF NIYPVL +F++
Sbjct: 223 EPEIFPGLIYRMANPKIVLLIFASGKIVLTGAKNKNDITLAFNNIYPVLQKFKR 276
>gi|449016069|dbj|BAM79471.1| TATA-box binding protein [Cyanidioschyzon merolae strain 10D]
Length = 260
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 149/177 (84%), Gaps = 1/177 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++VNL C LDL+ IA++ARNAEYNP+RFAAVIMRIR+P+TTALIF+SGK+V TGA
Sbjct: 45 LQNVVASVNLLCPLDLRHIAMRARNAEYNPQRFAAVIMRIRDPRTTALIFSSGKVVITGA 104
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+SE+ ++LAARKYA+I++KLG+ K DF++ N+V S DV+FPIRLE LA++H ++ Y
Sbjct: 105 RSEEDARLAARKYAKIVRKLGYADVKLADFELHNLVASADVRFPIRLEALAHAHSNYAHY 164
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
EPELFPGL+YRM +P++ LLIFVSGK+VITGAK RD+ AF+ +YPVL +FRK
Sbjct: 165 EPELFPGLVYRMLEPRLALLIFVSGKVVITGAKSRDDLNEAFQRLYPVLCQFRKADS 221
>gi|403333508|gb|EJY65856.1| Tata box binding protein [Oxytricha trifallax]
Length = 500
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/169 (71%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVST NL KLDL+KIA+ RNAEYNPKRFAAVIMRIR+PKTTALIF+SGKMVCTGA
Sbjct: 312 LQNIVSTANLGMKLDLRKIAMNCRNAEYNPKRFAAVIMRIRDPKTTALIFSSGKMVCTGA 371
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KSE+ S+ AA+KY++ I+K+GF +DFKIQNIVGSCDV FPI LE L+ +H FS Y
Sbjct: 372 KSEEFSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSTHEKFSQY 431
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
EPE+FPGLIYRM PKIVLLIF SGKIV+TGAK +++ A+ENIYPVL
Sbjct: 432 EPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 480
>gi|47217167|emb|CAG11003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 283
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 131/143 (91%)
Query: 47 RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKI 106
RFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKI
Sbjct: 140 RFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKI 199
Query: 107 QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGA 166
QN+VGSCDV+FPIRLEGL +H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGA
Sbjct: 200 QNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGA 259
Query: 167 KVRDETYTAFENIYPVLTEFRKV 189
KVR E Y AFENIYP+L FRK
Sbjct: 260 KVRAEIYEAFENIYPILKGFRKT 282
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L + + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 199 IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG 258
Query: 75 AK 76
AK
Sbjct: 259 AK 260
>gi|403354886|gb|EJY77003.1| Tata box binding protein [Oxytricha trifallax]
Length = 502
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 141/180 (78%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+L +++NIV+T N CKLDL++IAL ARN EYNPKRFAA IMRIREPKTTALIF SG
Sbjct: 294 LLNGDPTLQNIVATCNFGCKLDLRQIALNARNCEYNPKRFAAAIMRIREPKTTALIFQSG 353
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KMVCTGAK E++S+ A ++YA+ ++K+GF + K+FKIQN+V S D FPI LEGL+ H
Sbjct: 354 KMVCTGAKDEEKSRTACKQYAKAVRKIGFNVQMKEFKIQNVVASHDCGFPISLEGLSNEH 413
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FS+YEPELFPGLIYRM PK+V+LIF SGKIV TGAK R++ A+ NI PVL + +K
Sbjct: 414 DKFSTYEPELFPGLIYRMASPKLVMLIFASGKIVFTGAKTREQIRDAYRNIDPVLRKHKK 473
>gi|331686248|gb|AED87004.1| tata box binding protein [Sterkiella histriomuscorum]
Length = 302
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/169 (71%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVST NL KLDL+KIA+ RNAEYNPKRFAAVIMRIR+PKTTALIF+SGKMVCTGA
Sbjct: 114 LQNIVSTANLGMKLDLRKIAMNCRNAEYNPKRFAAVIMRIRDPKTTALIFSSGKMVCTGA 173
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KSE+ S+ AA+KY++ I+K+GF +DFKIQNIVGSCDV FPI LE L+ +H FS Y
Sbjct: 174 KSEEFSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSTHEKFSQY 233
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
EPE+FPGLIYRM PKIVLLIF SGKIV+TGAK +++ A+ENIYPVL
Sbjct: 234 EPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 282
>gi|345492218|ref|XP_001603648.2| PREDICTED: TATA-box-binding protein-like [Nasonia vitripennis]
Length = 238
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 141/173 (81%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTV+L C+L+L I + RN+EYNP RF +IMRIR P+ TALIF SGK+VCTGA
Sbjct: 65 LQNVVSTVSLGCELNLTYINTRTRNSEYNPARFTGLIMRIRNPRVTALIFRSGKLVCTGA 124
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+ E+ S LAA+K+ARIIQK+GFP KF+DFKIQNIV + D+KFPI+LE L++ HG FSSYE
Sbjct: 125 RCEEDSFLAAKKFARIIQKIGFPVKFRDFKIQNIVATADLKFPIKLENLSHKHGQFSSYE 184
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGLIYRM P++VLLIFV+GKIV+TGAK R E A NIYP+L FRK
Sbjct: 185 PELYPGLIYRMVLPRVVLLIFVNGKIVLTGAKNRQELKDALHNIYPILKSFRK 237
>gi|383860592|ref|XP_003705773.1| PREDICTED: TATA-box-binding protein-like [Megachile rotundata]
Length = 241
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 138/173 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L +I + RN+EYNP RF +IMRIR P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTVNLGTELKLMQINTRTRNSEYNPARFTGLIMRIRNPRATALIFHSGKLVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+ E+ S LA RK+ARIIQKLGFP KF +FKIQNIV +CD+KFPI+LE L + HG FSSYE
Sbjct: 128 RCEEDSYLATRKFARIIQKLGFPVKFYNFKIQNIVATCDLKFPIKLENLNHIHGQFSSYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGLIYRM P++VLLIFV+GKIV+TGAK R E A NIYP+L FRK
Sbjct: 188 PELYPGLIYRMVSPRVVLLIFVNGKIVLTGAKNRTELQDALNNIYPILKSFRK 240
>gi|331686256|gb|AED87008.1| tata box binding protein [Nyctotherus ovalis]
Length = 195
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 143/172 (83%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVSTVNL C+LDL+KI LQA+NAEYNPKRFAAVIMRIR PKTTALIF+SGK+VCTGA
Sbjct: 17 LENIVSTVNLACELDLRKITLQAKNAEYNPKRFAAVIMRIRNPKTTALIFSSGKIVCTGA 76
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE S+ AA KYA+ I+KLGF KFK+F IQN+V SC V+F I L+ L S+ FS+Y+
Sbjct: 77 KSETDSRTAAMKYAKTIKKLGFNVKFKEFTIQNMVASCGVEFGINLDELLLSYNRFSTYD 136
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PE+FPGLI+RM+ PKIV LIF SGKI++TGAK RD+ + A+ IYP+LT F+
Sbjct: 137 PEIFPGLIFRMEDPKIVFLIFSSGKIILTGAKQRDQIFKAYHKIYPMLTIFK 188
>gi|331686252|gb|AED87006.1| tata box binding protein [Sterkiella histriomuscorum]
Length = 299
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/169 (71%), Positives = 141/169 (83%), Gaps = 1/169 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIVST NL KLDL+KIAL RNAEYNP+RFAAVIMRIREPKTTALIF+SGKMV TGA
Sbjct: 111 LQNIVSTANLGMKLDLRKIALNCRNAEYNPRRFAAVIMRIREPKTTALIFSSGKMVRTGA 170
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KSE+ S+ AA+KY++ I+K+GF +DFKIQNIVGSCDV FPI LE L+ +H FS Y
Sbjct: 171 KSEEFSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSAHDKFSQY 230
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
EPE+FPGLIYRM PKIVLLIF SGKIV+TGAK +++ A+ENIYPVL
Sbjct: 231 EPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 279
>gi|348686379|gb|EGZ26194.1| hypothetical protein PHYSODRAFT_345098 [Phytophthora sojae]
Length = 255
Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 142/174 (81%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V TV+L LDLK IAL ARNAEYNPKRF+AVIMR+R+PKTTALIF SGK+V TG
Sbjct: 54 IMNVVGTVDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGG 113
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+ +LAARK+ R+IQKL FPAKF +FK++N++G+CD++FPIRLEGL H FSSYE
Sbjct: 114 TSEESCRLAARKFTRVIQKLNFPAKFTEFKVRNVMGTCDIRFPIRLEGLLNDHARFSSYE 173
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PELFPGLIY++ +PK+ LLIFVSGKIV+ GA+ + + A + +YPVL ++RK+
Sbjct: 174 PELFPGLIYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQYRKM 227
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KI N+VG+ D+K P+ L+ +A H + Y P+ F +I R++ PK LIF SGKIVIT
Sbjct: 53 KIMNVVGTVDLKTPLDLKTIAL-HARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVIT 111
Query: 165 GA 166
G
Sbjct: 112 GG 113
>gi|301112330|ref|XP_002905244.1| TATA-box-binding protein [Phytophthora infestans T30-4]
gi|262095574|gb|EEY53626.1| TATA-box-binding protein [Phytophthora infestans T30-4]
Length = 251
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 141/174 (81%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V TV+L LDLK IAL ARNAEYNPKRF+AVIMR+R+PKTTALIF SGK+V TG
Sbjct: 50 IMNVVGTVDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGG 109
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +LAARK+ R+IQKL FPAKF +FK++N++G+CD++FPIRLEGL H FSSYE
Sbjct: 110 TSEDSCRLAARKFTRVIQKLNFPAKFTEFKVRNVMGTCDIRFPIRLEGLLNDHARFSSYE 169
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PELFPGLIY++ +PK+ LLIFVSGKIV+ GA+ + + A + +YPVL ++RK+
Sbjct: 170 PELFPGLIYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQYRKM 223
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
+ KI N+VG+ D+K P+ L+ +A H + Y P+ F +I R++ PK LIF SGKIV
Sbjct: 47 EVKIMNVVGTVDLKTPLDLKTIAL-HARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIV 105
Query: 163 ITGAKVRD 170
ITG D
Sbjct: 106 ITGGTSED 113
>gi|167518271|ref|XP_001743476.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778575|gb|EDQ92190.1| predicted protein [Monosiga brevicollis MX1]
Length = 181
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 143/173 (82%), Gaps = 1/173 (0%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+N+V+TV +CKLDLK IA ARNAEY+PKRF+AVIMRIREP TTALIF+SGKM+CTGAK
Sbjct: 8 RNLVATVTFNCKLDLKHIANNARNAEYSPKRFSAVIMRIREPHTTALIFSSGKMICTGAK 67
Query: 77 SEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE + A RKYA+II+KLG+ + ++F+IQN+VGSCDV+FPIRLEGLA +H F +YE
Sbjct: 68 SEDDAWRATRKYAQIIKKLGYGELRHENFQIQNMVGSCDVRFPIRLEGLAANHQCFCTYE 127
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+FPGL+YRM +PK+VLLIFVSGK+V+TGAK R + A IY +L +FRK
Sbjct: 128 PEIFPGLVYRMVKPKVVLLIFVSGKVVVTGAKSRQTIHDAINAIYSILQQFRK 180
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ +A + Y P+ F ++ R+ +PK LIF SGK+V TG
Sbjct: 98 IQNMVGSCDVRFPIRLEGLAANHQCFCTYEPEIFPGLVYRMVKPKVVLLIFVSGKVVVTG 157
Query: 75 AKSEQQSKLAARKYARIIQKLGFP 98
AKS Q A I+Q+ P
Sbjct: 158 AKSRQTIHDAINAIYSILQQFRKP 181
>gi|331686254|gb|AED87007.1| tata box binding protein [Sterkiella nova]
Length = 301
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 141/170 (82%), Gaps = 1/170 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIVST NL +L L++IA+ RNAEYNP+RFAAVIMRIREPKTTALIF SGKMVCTG
Sbjct: 112 TLQNIVSTANLGVELKLREIAMNCRNAEYNPRRFAAVIMRIREPKTTALIFRSGKMVCTG 171
Query: 75 AKSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
AKSE+ S+ AA+KY++ I+K+GF +DFKIQNIVGSCDV FPI LE L+ +H FS
Sbjct: 172 AKSEELSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSAHDKFSQ 231
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
YEPE+FPGLIYRM PKIVLLIF SGKIV+TGAK +++ A+ENIYPVL
Sbjct: 232 YEPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 281
>gi|66498987|ref|XP_394229.2| PREDICTED: TATA-box-binding protein-like [Apis mellifera]
Length = 241
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 138/173 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L I + RN+EYNP RF +IMRIR P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTVNLGIELPLMYINTRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SE+ S LA RK+ARIIQKLGF AKF +FKIQNIV +CD+KFPI+LE L + HG FSSYE
Sbjct: 128 RSEEDSYLATRKFARIIQKLGFAAKFYNFKIQNIVATCDLKFPIKLENLNHIHGQFSSYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGLIYRM P++VLLIFV+GK+V+TGAK R E A NIYP+L FRK
Sbjct: 188 PELYPGLIYRMVSPRVVLLIFVNGKVVLTGAKNRTELQDALNNIYPILKSFRK 240
>gi|380013265|ref|XP_003690685.1| PREDICTED: TATA-box-binding protein-like [Apis florea]
Length = 241
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 138/173 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L I + RN+EYNP RF +IMRIR P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTVNLGIELPLMYINTRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SE+ S LA RK+ARIIQKLGF AKF +FKIQNIV +CD+KFPI+LE L + HG FSSYE
Sbjct: 128 RSEEDSYLATRKFARIIQKLGFAAKFYNFKIQNIVATCDLKFPIKLENLNHIHGQFSSYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGLIYRM P++VLLIFV+GK+V+TGAK R E A NIYP+L FRK
Sbjct: 188 PELYPGLIYRMVSPRVVLLIFVNGKVVLTGAKNRTELQDALNNIYPILKSFRK 240
>gi|323447675|gb|EGB03588.1| hypothetical protein AURANDRAFT_33824 [Aureococcus anophagefferens]
Length = 274
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 141/178 (79%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
GA V+N+V+TVNL +DL+ +AL ARNAEYNPK+FAAVIMR+REP+ TAL+F++GKM
Sbjct: 45 GATIDVQNVVATVNLRISIDLRTLALNARNAEYNPKKFAAVIMRVREPRCTALVFSTGKM 104
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGAKSE ++ ARK+A II+K+GF KF +FK+QN+V + D FPIRLE L Y+H
Sbjct: 105 VITGAKSEDAARRGARKFAAIIRKIGFQPKFGEFKVQNMVATSDAGFPIRLEALVYAHAK 164
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FSSYEPELFPGLIYR+ PK VLL+FVSG++V+TG K TAFE +YPVLTEF+K
Sbjct: 165 FSSYEPELFPGLIYRLVIPKTVLLLFVSGRMVLTGGKSLGHLRTAFEKMYPVLTEFKK 222
>gi|119187015|ref|XP_001244114.1| hypothetical protein CIMG_03555 [Coccidioides immitis RS]
Length = 137
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/137 (86%), Positives = 124/137 (90%)
Query: 53 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
MRIREPKTTALIFASGKMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGS
Sbjct: 1 MRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGS 60
Query: 113 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDET 172
CD+KFPIRLEGLA H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E
Sbjct: 61 CDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEI 120
Query: 173 YTAFENIYPVLTEFRKV 189
Y AFE IYPVLT+FRKV
Sbjct: 121 YQAFEMIYPVLTDFRKV 137
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + N + Y P+ F +I R+ +PK LIF SGK+V TG
Sbjct: 54 IQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTG 113
Query: 75 AKSEQQ 80
AK ++
Sbjct: 114 AKVREE 119
>gi|395330269|gb|EJF62653.1| TBP-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 137
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/136 (84%), Positives = 124/136 (91%)
Query: 53 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
MRIR+PKTTALIFASGKMV TGAKSE S+LA+RKYARI+QKLGF AKF +FKIQNIVGS
Sbjct: 1 MRIRDPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGS 60
Query: 113 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDET 172
CDVKFPIRLEGLAYSHG FSSYEPELFPGLIYRM +PK+VLLIFVSGKIV+TGAKVR+E
Sbjct: 61 CDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEI 120
Query: 173 YTAFENIYPVLTEFRK 188
YTAF IY VL EFRK
Sbjct: 121 YTAFNTIYTVLVEFRK 136
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + + Y P+ F +I R+ +PK LIF SGK+V TG
Sbjct: 54 IQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTG 113
Query: 75 AKSEQQ 80
AK ++
Sbjct: 114 AKVREE 119
>gi|340728982|ref|XP_003402790.1| PREDICTED: TATA-box-binding protein-like [Bombus terrestris]
Length = 241
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 136/173 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L I + RN+EYNP RF ++MRIR P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTVNLGIQLPLMYINTRTRNSEYNPARFTGLVMRIRNPRATALIFHSGKLVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+ E+ S LA RK+ARIIQKLGF KF +FKIQNIV +CD+KFPI+LE L + HG FSSYE
Sbjct: 128 RCEEDSFLATRKFARIIQKLGFTVKFYNFKIQNIVATCDLKFPIKLENLNHIHGQFSSYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGLIYRM P++VLLIFV+GKIV+TGAK R E A NIYP+L FRK
Sbjct: 188 PELYPGLIYRMVSPRVVLLIFVNGKIVLTGAKNRAELQDALNNIYPILKSFRK 240
>gi|350425498|ref|XP_003494140.1| PREDICTED: TATA-box-binding protein-like [Bombus impatiens]
Length = 241
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 136/173 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L I + RN+EYNP RF ++MRIR P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTVNLGIELPLMYINTRTRNSEYNPARFTGLVMRIRNPRATALIFHSGKLVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+ E+ S LA RK+ARIIQKLGF KF +FKIQNIV +CD+KFPI+LE L + HG FSSYE
Sbjct: 128 RCEEDSFLATRKFARIIQKLGFTVKFYNFKIQNIVATCDLKFPIKLENLNHIHGQFSSYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGLIYRM P++VLLIFV+GKIV+TGAK R E A NIYP+L FRK
Sbjct: 188 PELYPGLIYRMVSPRVVLLIFVNGKIVLTGAKNRVELQDALNNIYPILKSFRK 240
>gi|326497179|dbj|BAK02174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 137
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/137 (85%), Positives = 123/137 (89%)
Query: 53 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
MRIREPKTTALIFASGKMV TGAKSE SKLA+RKYARIIQKLGF AKF DFKIQNIVGS
Sbjct: 1 MRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGS 60
Query: 113 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDET 172
CD+KFPIRLEGLA H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAKVR+E
Sbjct: 61 CDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEI 120
Query: 173 YTAFENIYPVLTEFRKV 189
Y AFE IYPVL +FRKV
Sbjct: 121 YQAFEMIYPVLQDFRKV 137
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + N + Y P+ F +I R+ +PK LIF SGK+V TG
Sbjct: 54 IQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTG 113
Query: 75 AKSEQQ 80
AK ++
Sbjct: 114 AKVREE 119
>gi|170031575|ref|XP_001843660.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167870488|gb|EDS33871.1| TATA-box-binding protein [Culex quinquefasciatus]
Length = 236
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 138/173 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+N V+TV+L C+L+L+ I + RN+EYNP RF V+MRIR+P+ TAL+F SGK+VCTGA
Sbjct: 63 VRNCVATVSLGCELNLQSINFRTRNSEYNPSRFHGVVMRIRDPRCTALVFRSGKIVCTGA 122
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+E + LAARK+ARIIQK+G+ KF +FK+QN+V + D++FP+RLE L HG FSSYE
Sbjct: 123 KNEHDANLAARKFARIIQKVGYNVKFLEFKVQNLVATVDLRFPVRLENLNQVHGQFSSYE 182
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +P++VLLIFV+GKIV TGAK E + ENIYP+L FRK
Sbjct: 183 PELFPGLIYRMVKPRVVLLIFVNGKIVFTGAKSEWEIRESLENIYPILQSFRK 235
>gi|325182645|emb|CCA17100.1| TATAboxbinding protein putative [Albugo laibachii Nc14]
Length = 270
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 138/176 (78%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
+ V N+V T++L +L+LK IAL ARNAEYNPKRF AV+MR+R+PKTTALIF+SGK+V T
Sbjct: 74 TKVMNVVGTIDLKTRLELKTIALHARNAEYNPKRFCAVVMRLRDPKTTALIFSSGKIVIT 133
Query: 74 GAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
GA+SE+ +LA RK+ R+IQKL FPA+F++F+IQNI+G+ DV F IRLEG+ H F S
Sbjct: 134 GARSEEFCRLAGRKFTRVIQKLHFPARFENFRIQNIMGTSDVHFSIRLEGILNDHARFCS 193
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPELFPGLIYR+ +PK+ +LIFVSGKIV GAK A E +YPVL E+RK
Sbjct: 194 YEPELFPGLIYRLTEPKLTMLIFVSGKIVFCGAKDSSHLDQAIEKMYPVLLEYRKT 249
>gi|307206120|gb|EFN84200.1| TATA-box-binding protein [Harpegnathos saltator]
Length = 241
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 139/173 (80%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VST++L +L L I ++ RN+EYNP RF ++MRI+ P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTIDLQTELKLMYINVRTRNSEYNPARFTGLVMRIQNPRATALIFRSGKLVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SE +S LAA+K+ARIIQKLGFP +F F +QNIV +CD+KFPI+LE L HG FSSYE
Sbjct: 128 RSEDESLLAAKKFARIIQKLGFPVRFTSFTVQNIVATCDLKFPIKLESLNQMHGQFSSYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGL YRM +P++VLLIFV+GK+VITGAK R++ + A +IYP+L FRK
Sbjct: 188 PELYPGLTYRMLKPRVVLLIFVNGKVVITGAKKREDLHEALYHIYPILKSFRK 240
>gi|242014208|ref|XP_002427783.1| trf2 protein, putative [Pediculus humanus corporis]
gi|212512252|gb|EEB15045.1| trf2 protein, putative [Pediculus humanus corporis]
Length = 231
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 138/174 (79%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V+TVNL +LDL+KI RN EYNP RF ++MRIREPKTTALIF SGK+V TG
Sbjct: 57 TLQNVVATVNLMNELDLRKINFCTRNTEYNPSRFKGLVMRIREPKTTALIFRSGKIVVTG 116
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSE + LAARKYARIIQKLGF KF FKIQNIVG+CDV+FPI+LE L HG FSSY
Sbjct: 117 AKSEDAALLAARKYARIIQKLGFSIKFCSFKIQNIVGTCDVRFPIKLESLNQIHGQFSSY 176
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFP LIYR+ +P++VLLIFV+GKIV+TGA+ + + A + + P+L FRK
Sbjct: 177 EPELFPALIYRLVKPRVVLLIFVNGKIVLTGARTQQDIQEALDIMLPILKSFRK 230
>gi|157126257|ref|XP_001654561.1| TATA binding protein, putative [Aedes aegypti]
gi|108882533|gb|EAT46758.1| AAEL002079-PA [Aedes aegypti]
Length = 234
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 138/173 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+N V+TV+L C+L+L+ I + RN+EYNP RF V+MRIREP+ TAL+F SGK+VCTGA
Sbjct: 61 VRNCVATVSLGCELNLQAINFRLRNSEYNPARFHGVVMRIREPRCTALVFRSGKIVCTGA 120
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E + LAARK+ARIIQKLG+ +F +FK+QN+V + D++FPIRLE L HG FSSYE
Sbjct: 121 RNEADAYLAARKFARIIQKLGYSVRFIEFKVQNLVATVDLRFPIRLENLNQVHGQFSSYE 180
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PELFPGLIYRM +P++VLLIFV+GKIV TGAK E + ENIYP+L FRK
Sbjct: 181 PELFPGLIYRMVKPRVVLLIFVNGKIVFTGAKSEREVTDSLENIYPILQSFRK 233
>gi|332018160|gb|EGI58766.1| TATA-box-binding protein [Acromyrmex echinatior]
Length = 240
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 135/173 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L I ++ RN+EYNP RF +IMRI+ P+ TALIF SGK+VCTGA
Sbjct: 67 LQNVVSTVNLQTELKLMYINVRTRNSEYNPARFTGLIMRIQNPRATALIFRSGKLVCTGA 126
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SEQ S LAA+K+ARIIQKLGFP KF FKIQNIV +CD+KFPI+LE L HG FSSYE
Sbjct: 127 RSEQDSFLAAKKFARIIQKLGFPVKFSSFKIQNIVATCDLKFPIKLEILYQCHGQFSSYE 186
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+PGL YRM P++VLLIFV+GK+V+TGAK R E A IYP L +RK
Sbjct: 187 PELYPGLTYRMYSPRVVLLIFVNGKVVLTGAKNRTELQDALNIIYPTLKMYRK 239
>gi|432937597|ref|XP_004082456.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-like
protein 2-like [Oryzias latipes]
Length = 354
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 139/180 (77%), Gaps = 2/180 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTV L C LDLK IA QARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 174 GIVPQLQNIVSTVTLGCPLDLKFIARQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 233
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE++S+LAARKYAR++QKLGF A+F +FKIQN+V SCDV FPIRLEGL +H
Sbjct: 234 VCTGAKSEEESRLAARKYARVVQKLGFSARFLEFKIQNMVASCDVCFPIRLEGLVLTHQQ 293
Query: 131 FSSYEPELFPGLIYRMKQ-PKIVLLIFVSG-KIVITGAKVRDETYTAFENIYPVLTEFRK 188
FS Y+ P + PK++L F+ +V+TGAK R E Y AFENIYP+L FRK
Sbjct: 294 FSRYQSHQHPTNSWTSCXFPKMLLCFFLDHISVVLTGAKERAEIYEAFENIYPILKGFRK 353
>gi|332374320|gb|AEE62301.1| unknown [Dendroctonus ponderosae]
Length = 243
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 141/174 (81%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N V+TV++ L+L+ I + RN E+NP+RF +IMRIREPKTTALIF SGK+VCTG
Sbjct: 69 ALQNCVATVDMHTTLNLQLINAKTRNTEFNPQRFHGLIMRIREPKTTALIFRSGKIVCTG 128
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
A++E + +A++K+AR+IQKLGF KF +FK+QN+V +CD+KFPI+LE L + HG FSSY
Sbjct: 129 ARNEFDALIASKKFARVIQKLGFHIKFANFKVQNLVATCDLKFPIKLENLNHMHGQFSSY 188
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGL+YRM +PKIVLLIFV+GKIV TG K R++ A ENI+P+L FRK
Sbjct: 189 EPELFPGLVYRMIKPKIVLLIFVNGKIVFTGGKSREDIKEALENIHPILRSFRK 242
>gi|189236649|ref|XP_969256.2| PREDICTED: similar to TATA-box-binding protein [Tribolium
castaneum]
Length = 236
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 140/174 (80%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N V+TV+L+ KLDL I + RN+EYNP RF +IMR+R+P+TTALIF +GK+VCTG
Sbjct: 62 TIQNCVTTVDLNTKLDLALINARTRNSEYNPARFHGLIMRLRDPRTTALIFQTGKIVCTG 121
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSEQ + LA++K+ARIIQKLGF KF +FKIQN+V +CD++FPI+LE L+ HG F SY
Sbjct: 122 AKSEQDALLASKKFARIIQKLGFDIKFDNFKIQNLVATCDLRFPIKLESLSLLHGQFCSY 181
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPG+IYRM +P + LLIFV+GKIV TG+K R+ + +NIYP+L F+K
Sbjct: 182 EPELFPGIIYRMIKPHLCLLIFVNGKIVFTGSKSREGIKESLDNIYPILRSFKK 235
>gi|270005208|gb|EFA01656.1| hypothetical protein TcasGA2_TC007228 [Tribolium castaneum]
Length = 238
Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 140/174 (80%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N V+TV+L+ KLDL I + RN+EYNP RF +IMR+R+P+TTALIF +GK+VCTG
Sbjct: 64 TIQNCVTTVDLNTKLDLALINARTRNSEYNPARFHGLIMRLRDPRTTALIFQTGKIVCTG 123
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
AKSEQ + LA++K+ARIIQKLGF KF +FKIQN+V +CD++FPI+LE L+ HG F SY
Sbjct: 124 AKSEQDALLASKKFARIIQKLGFDIKFDNFKIQNLVATCDLRFPIKLESLSLLHGQFCSY 183
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPG+IYRM +P + LLIFV+GKIV TG+K R+ + +NIYP+L F+K
Sbjct: 184 EPELFPGIIYRMIKPHLCLLIFVNGKIVFTGSKSREGIKESLDNIYPILRSFKK 237
>gi|219113475|ref|XP_002186321.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583171|gb|ACI65791.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+ STVNL +LDLKKIAL+ RN E+NP+RF AVIMR+REP+ TALIF+SGKM TG
Sbjct: 4 IQNMSSTVNLGTRLDLKKIALKCRNTEFNPRRFGAVIMRLREPRATALIFSSGKMCVTGV 63
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS + LAA+K+A I++++GF P + DFK+QNIVG+ DV FPIRLEGL Y+H AF+SY
Sbjct: 64 KSTHNANLAAKKFAYIVERVGFKPKENIDFKVQNIVGTADVGFPIRLEGLVYAHSAFASY 123
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
EPELFPGLIYR P++V LIFVSGKIVITGAK + A ++PVL EF+K
Sbjct: 124 EPELFPGLIYRFVNPRVVFLIFVSGKIVITGAKKEMDLAHALTKLFPVLMEFKKTH 179
>gi|224009416|ref|XP_002293666.1| transcription factor IID, TATA box binding protein [Thalassiosira
pseudonana CCMP1335]
gi|220970338|gb|EED88675.1| transcription factor IID, TATA box binding protein [Thalassiosira
pseudonana CCMP1335]
Length = 167
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/167 (63%), Positives = 134/167 (80%), Gaps = 1/167 (0%)
Query: 22 TVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQS 81
T +L +LDLK+IAL+ RN E+NP+RFAAVIMR+REP+ TAL+F+SG+MV TG KS
Sbjct: 1 TADLGVRLDLKQIALRCRNTEFNPRRFAAVIMRLREPRATALLFSSGRMVITGTKSSHNC 60
Query: 82 KLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFP 140
LA +K+A I++++GF PA F DFKIQN+VG+ DV FPIRLEG+ Y+H FSSYEPELFP
Sbjct: 61 SLATKKFAYILERVGFQPAGFIDFKIQNVVGTVDVGFPIRLEGVVYAHPTFSSYEPELFP 120
Query: 141 GLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
GLIYR+ QP++VLLIFVSGK+VITGAK ++ A +YPVL EFR
Sbjct: 121 GLIYRLVQPRVVLLIFVSGKVVITGAKTEEQMVEALRKVYPVLVEFR 167
>gi|37727185|gb|AAO34523.1| TATA-binding protein isoform 4 [Branchiostoma floridae]
Length = 136
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 121/134 (90%)
Query: 55 IREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCD 114
IR+P+TTALIF+SGKMVCTGAKSE QS+LAARKYAR++QKLGFP KF DFKIQN+VGSCD
Sbjct: 1 IRDPRTTALIFSSGKMVCTGAKSEDQSRLAARKYARVVQKLGFPCKFLDFKIQNMVGSCD 60
Query: 115 VKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYT 174
VKFPIRLEGL +H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR+E Y
Sbjct: 61 VKFPIRLEGLVLTHAQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYE 120
Query: 175 AFENIYPVLTEFRK 188
AFE IYP+L FRK
Sbjct: 121 AFETIYPILKGFRK 134
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L A+ + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 52 IQNMVGSCDVKFPIRLEGLVLTHAQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 111
Query: 75 AKSEQQ 80
AK ++
Sbjct: 112 AKVREE 117
>gi|195388008|ref|XP_002052684.1| GJ17690 [Drosophila virilis]
gi|194149141|gb|EDW64839.1| GJ17690 [Drosophila virilis]
Length = 220
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 136/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T ++DC+LDLK I + RN+EY PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVDCELDLKTINSRTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 106
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF D+K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 107 RNEMEANIGSRKFARILQKLGFPVKFVDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GKIV TGAK R + E I P+L FRK
Sbjct: 167 PEMFPGLIYRMVKPRIVLLIFVNGKIVFTGAKSRKDIMDCLEAISPILLSFRKT 220
>gi|195117828|ref|XP_002003449.1| GI17918 [Drosophila mojavensis]
gi|193914024|gb|EDW12891.1| GI17918 [Drosophila mojavensis]
Length = 220
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 136/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T ++DC+LDLK I + RN+EY PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVDCELDLKTINSRTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 106
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF D+K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 107 RNETEANIGSRKFARILQKLGFPVKFVDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GKIV TGAK R + E I P+L FRK
Sbjct: 167 PEMFPGLIYRMVKPRIVLLIFVNGKIVFTGAKSRKDIMDCLEAISPILLSFRKT 220
>gi|403278005|ref|XP_003930626.1| PREDICTED: TATA box-binding protein-like protein 2 [Saimiri
boliviensis boliviensis]
Length = 381
Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAA---VIMRIREPKTTALIFAS 67
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPK + +P +
Sbjct: 200 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKLCGEPWHIFSYDYQPNLPCVKPLR 259
Query: 68 GKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
A E+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDVKFPIRLEGL +
Sbjct: 260 SFTSPGSANCEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVKFPIRLEGLVLT 319
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E AFENIYP+L F+
Sbjct: 320 HQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEICEAFENIYPILKSFK 379
Query: 188 KV 189
K
Sbjct: 380 KA 381
>gi|195035545|ref|XP_001989238.1| GH11614 [Drosophila grimshawi]
gi|193905238|gb|EDW04105.1| GH11614 [Drosophila grimshawi]
Length = 220
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 136/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T ++DC+LDLK I + RN+EY PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVDCELDLKTINSRTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 106
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF D+K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 107 RNEIEANMGSRKFARILQKLGFPVKFVDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P++VLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 167 PEMFPGLIYRMVKPRLVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 220
>gi|452819885|gb|EME26936.1| transcription initiation factor TFIID TATA-box-binding protein
[Galdieria sulphuraria]
Length = 206
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 14 SSVKNIVSTVNLDCK-LDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ + N+V TVNL + LDLK IA++ARNAEYNPKRF AVIMR+REPKTTALIF+SGK+V
Sbjct: 28 AEIVNLVCTVNLGVRNLDLKTIAIKARNAEYNPKRFQAVIMRVREPKTTALIFSSGKIVV 87
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKSE++SK AA+K+ I++K G+ AKF +FK+QN+VG+ V FPIRLE LA +H F
Sbjct: 88 TGAKSEEESKRAAKKFVVIVRKCGYEEAKFSEFKVQNVVGTSAVDFPIRLEALAQAHTQF 147
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
+YEPELFPGL+YRM +PKIVLLIFVSGK+V+TG K R + A E I VL F+K +
Sbjct: 148 CTYEPELFPGLVYRMMEPKIVLLIFVSGKLVLTGGKTRKQIDEALEKIKNVLVTFKKTR 206
>gi|194863019|ref|XP_001970236.1| GG10512 [Drosophila erecta]
gi|190662103|gb|EDV59295.1| GG10512 [Drosophila erecta]
Length = 224
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 138/174 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L + HG FSSYE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNHVHGQFSSYE 170
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 224
>gi|17136834|ref|NP_476939.1| TBP-related factor [Drosophila melanogaster]
gi|25091428|sp|Q27896.1|TRF_DROME RecName: Full=TBP-related factor
gi|11136|emb|CAA50185.1| TBP-related factor [Drosophila melanogaster]
gi|11138|emb|CAA50186.1| TBP-related factor [Drosophila melanogaster]
gi|7297339|gb|AAF52600.1| TBP-related factor [Drosophila melanogaster]
gi|21711771|gb|AAM75076.1| RE61442p [Drosophila melanogaster]
gi|220942420|gb|ACL83753.1| Trf-PA [synthetic construct]
gi|220955718|gb|ACL90402.1| Trf-PA [synthetic construct]
gi|445085|prf||1908393A TATA-binding protein-related factor
Length = 224
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 138/174 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L + HG FSSYE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNHVHGQFSSYE 170
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 224
>gi|195434401|ref|XP_002065191.1| GK15318 [Drosophila willistoni]
gi|194161276|gb|EDW76177.1| GK15318 [Drosophila willistoni]
Length = 226
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 136/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T ++ C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 53 LQNIVATFSVACELDLKSINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 112
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF D+K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 113 RNEIEADIGSRKFARILQKLGFPVKFTDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 173 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 226
>gi|195472903|ref|XP_002088737.1| GE18732 [Drosophila yakuba]
gi|194174838|gb|EDW88449.1| GE18732 [Drosophila yakuba]
Length = 224
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 137/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 224
>gi|195339082|ref|XP_002036150.1| GM16720 [Drosophila sechellia]
gi|194130030|gb|EDW52073.1| GM16720 [Drosophila sechellia]
Length = 224
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 137/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 224
>gi|195577454|ref|XP_002078585.1| GD23502 [Drosophila simulans]
gi|194190594|gb|EDX04170.1| GD23502 [Drosophila simulans]
Length = 224
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 137/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E ++ + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 224
>gi|125984322|ref|XP_001355925.1| GA20441 [Drosophila pseudoobscura pseudoobscura]
gi|195172938|ref|XP_002027252.1| GL24756 [Drosophila persimilis]
gi|54644243|gb|EAL32984.1| GA20441 [Drosophila pseudoobscura pseudoobscura]
gi|194113089|gb|EDW35132.1| GL24756 [Drosophila persimilis]
Length = 220
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 137/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVNCELDLKTINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 106
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E+ + + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 107 RNERDADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + + I P+L FRK
Sbjct: 167 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLDAISPILLSFRKT 220
>gi|256084656|ref|XP_002578543.1| TATA-box binding protein [Schistosoma mansoni]
gi|353228683|emb|CCD74854.1| putative tata-box binding protein [Schistosoma mansoni]
Length = 211
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 136/175 (77%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+VSTV+L C ++L+K+ L R+AEYNP+RF V+MR+REP+ T L+F +G+MVCTGA
Sbjct: 37 IHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVMRLREPRVTCLVFGTGRMVCTGA 96
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SE + L +RK ARI+Q+LGF KF +F IQN+VG D+KFPIRLEG+ ++ + YE
Sbjct: 97 RSESDANLGSRKCARILQRLGFDVKFMNFTIQNMVGLADLKFPIRLEGVQLANEQMTQYE 156
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
PE+FP LIYR+ +P++V+LIFV+GKIV+TGAK R+ Y A N+YP+L +RK+
Sbjct: 157 PEIFPALIYRIIKPRLVMLIFVNGKIVMTGAKSREHLYEALNNVYPILYNYRKIN 211
>gi|194759081|ref|XP_001961778.1| GF14757 [Drosophila ananassae]
gi|190615475|gb|EDV30999.1| GF14757 [Drosophila ananassae]
Length = 224
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 136/174 (78%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+T +++C+LDLK I + RN+EY+PKRF VIMR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
++E + + +RK+ARI+QKLGFP KF ++K+QNIV + D++FPIRLE L HG FSSYE
Sbjct: 111 RNEIDADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FPGLIYRM +P+IVLLIFV+GK+V TGAK R + E I P+L FRK
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT 224
>gi|389748066|gb|EIM89244.1| TATA-box binding protein-like protein [Stereum hirsutum FP-91666
SS1]
Length = 249
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 136/180 (75%), Gaps = 14/180 (7%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
I G V +++ IV TVNLDC+LDLK IAL ARNAEY PK FAA+I+ IR+PK TALIF SG
Sbjct: 43 IEGIVPTLQTIVVTVNLDCRLDLKTIALHARNAEYTPKCFAAIIVCIRDPKMTALIFPSG 102
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH 128
KM+ T AKSE S+LA RKYARI+QKLGF AKF +FKIQNIV SCD+KF IRLEGLAY
Sbjct: 103 KMIVTDAKSEDDSRLAPRKYARIVQKLGFNAKFSEFKIQNIVRSCDIKFFIRLEGLAYIT 162
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
G+ + LFPGLIYRM +PK+VLLIFVS VR+E YTAF +Y VL EFRK
Sbjct: 163 GSSA-----LFPGLIYRMIKPKVVLLIFVS---------VREEIYTAFNTVYTVLVEFRK 208
>gi|226466670|emb|CAX69470.1| TATA box binding protein like 2 [Schistosoma japonicum]
Length = 212
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 136/175 (77%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+VSTV+L C ++L+K+ L R+AEYNP+RF V++R+REP+ T L+F +G+MVCTGA
Sbjct: 38 IHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVIRLREPRVTCLVFGTGRMVCTGA 97
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SE + L +RK ARIIQKLGF KF +F IQN+VG D++FP+RLEG+ ++ + YE
Sbjct: 98 RSEADANLGSRKCARIIQKLGFDVKFMNFTIQNMVGLADLRFPVRLEGVQLANEQMTQYE 157
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
PE+FP LIYR+ +P++V+LIFV+GK+V+TGAK R+ Y A N+YP+L +RK+
Sbjct: 158 PEIFPALIYRIIKPRLVMLIFVNGKVVMTGAKSREHLYEALNNVYPILYNYRKIN 212
>gi|76155499|gb|AAX26791.2| SJCHGC06425 protein [Schistosoma japonicum]
Length = 227
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 136/175 (77%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+VSTV+L C ++L+K+ L R+AEYNP+RF V++R+REP+ T L+F +G+MVCTGA
Sbjct: 53 IHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVIRLREPRVTCLVFGTGRMVCTGA 112
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
+SE + L +RK ARIIQKLGF KF +F IQN+VG D++FP+RLEG+ ++ + YE
Sbjct: 113 RSEADANLGSRKCARIIQKLGFDVKFMNFTIQNMVGLADLRFPVRLEGVQLANEQMTQYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
PE+FP LIYR+ +P++V+LIFV+GK+V+TGAK R+ Y A N+YP+L +RK+
Sbjct: 173 PEIFPALIYRIIKPRLVMLIFVNGKVVMTGAKSREHLYEALNNVYPILYNYRKIN 227
>gi|322802013|gb|EFZ22550.1| hypothetical protein SINV_10179 [Solenopsis invicta]
Length = 158
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 124/155 (80%)
Query: 34 IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQ 93
I ++ RN+EYNP RF +IMRI+ P+ TALIF SGK+VCTGA+SE+ S LAA+K+ARIIQ
Sbjct: 3 INVRTRNSEYNPARFTGLIMRIQNPRATALIFRSGKLVCTGARSEEDSLLAAKKFARIIQ 62
Query: 94 KLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVL 153
KLGFP KF FKIQNIV +CD+KFPI+L+ L HG FSSYEPEL+PGL YRM P++VL
Sbjct: 63 KLGFPVKFTCFKIQNIVATCDLKFPIKLDNLNQMHGQFSSYEPELYPGLTYRMVLPRVVL 122
Query: 154 LIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
LIFV+GK+V+TGAK R E A NIYP+L FRK
Sbjct: 123 LIFVNGKVVLTGAKNRTELQDALNNIYPILKSFRK 157
>gi|407813853|gb|AFU35092.1| TATA box binding protein, partial [Tetranychus urticae]
Length = 122
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 115/122 (94%)
Query: 45 PKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF 104
PKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+LAARKYARI+QKLGF AKF DF
Sbjct: 1 PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARIVQKLGFDAKFLDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KIQN+VGSCDVKFPIRLEGL +H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+T
Sbjct: 61 KIQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 120
Query: 165 GA 166
GA
Sbjct: 121 GA 122
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L ++ + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 62 IQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 121
Query: 75 A 75
A
Sbjct: 122 A 122
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
P+ F +I R+++P+ LIF SGK+V TGAK +++ A
Sbjct: 1 PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLA 40
>gi|357612499|gb|EHJ68033.1| putative TATA binding protein [Danaus plexippus]
Length = 283
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 134/172 (77%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+N +STV+LDC+L+L I + R +EYNP RF V+M+I EP+ TAL+F SGK+VCTGAK
Sbjct: 111 QNCISTVSLDCELNLLDIYCRTRFSEYNPARFNGVVMKILEPRATALVFRSGKIVCTGAK 170
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
+ S +AARK+ARIIQKLGFP KF DFK+ N + + D++FPI+LE L +HG F+SYEP
Sbjct: 171 NGHDSYIAARKFARIIQKLGFPVKFVDFKVLNFLATADLRFPIKLEALQQAHGQFTSYEP 230
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
ELF GL+YRM +P++VLLIFV+GK+VITGAK E Y A + I+P+L ++K
Sbjct: 231 ELFSGLVYRMIRPRVVLLIFVNGKMVITGAKTNQEVYEAVDIIHPILRSYKK 282
>gi|222433591|gb|ACM51140.1| TATA box binding protein [Tetranychus cinnabarinus]
Length = 122
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 114/122 (93%)
Query: 45 PKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF 104
PK FAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+LAARKYARI+QKLGF AKF DF
Sbjct: 1 PKSFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARIVQKLGFDAKFLDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KIQN+VGSCDVKFPIRLEGL +H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+T
Sbjct: 61 KIQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 120
Query: 165 GA 166
GA
Sbjct: 121 GA 122
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L ++ + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 62 IQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 121
Query: 75 A 75
A
Sbjct: 122 A 122
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
P+ F +I R+++P+ LIF SGK+V TGAK +++ A
Sbjct: 1 PKSFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLA 40
>gi|307180303|gb|EFN68336.1| TATA-box-binding protein [Camponotus floridanus]
Length = 252
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 135/185 (72%), Gaps = 11/185 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VST NL +L L I ++ RN+EYNP RF +IMRIR P+ TALIF+SGK+VCTGA
Sbjct: 68 LQNVVSTANLGTELKLNYINIRTRNSEYNPARFTGLIMRIRNPRATALIFSSGKLVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKF--KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KSE S LAA+++ARIIQKLGFP KF FK+QNIV +CDVKFPI+LE L H S
Sbjct: 128 KSENDSFLAAKRFARIIQKLGFPVKFMSDSFKVQNIVATCDVKFPIKLENLYREHPQLCS 187
Query: 134 YEPELFPGLIYRMKQP---------KIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
YEPEL+PGLIYR+ P K+VLLIFV+GK+V+TGAK DE A +YPVL
Sbjct: 188 YEPELYPGLIYRVYIPGNRDNPPISKVVLLIFVNGKVVLTGAKNIDELRNALNLMYPVLM 247
Query: 185 EFRKV 189
++RK+
Sbjct: 248 QYRKM 252
>gi|281203489|gb|EFA77689.1| TATA-binding protein [Polysphondylium pallidum PN500]
Length = 192
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 126/178 (70%), Gaps = 34/178 (19%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVN+ +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF SGKM
Sbjct: 25 GIVPVLQNIVSTVNMGTQLDLKTIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKM 84
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+ SKLAARKYARIIQKL FPA+F DFKIQNIVGSCDVKFPI+LE L +H +
Sbjct: 85 VCTGAKSEEASKLAARKYARIIQKLDFPAQFTDFKIQNIVGSCDVKFPIKLEMLNNTHNS 144
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
F++ VR+E Y AFENIYPVLT ++K
Sbjct: 145 FTN----------------------------------VREEIYEAFENIYPVLTTYKK 168
>gi|431904621|gb|ELK10003.1| TATA-box-binding protein [Pteropus alecto]
Length = 193
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 111/121 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 61 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 120
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 121 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ 180
Query: 131 F 131
F
Sbjct: 181 F 181
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 65 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 123
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 124 GAKSEEQSRLA 134
>gi|341886263|gb|EGT42198.1| hypothetical protein CAEBREN_08601 [Caenorhabditis brenneri]
Length = 210
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 133/168 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VST++L LDL+KIAL RN EYNP RF A IMRIR P+TT LIF+SGK+VC GA
Sbjct: 40 IENVVSTISLGVPLDLEKIALNGRNIEYNPSRFGAAIMRIRNPRTTGLIFSSGKIVCAGA 99
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE+ + A+RKYARI++KLG+ AK F+IQNIV +C+V+F I L G++++H F ++E
Sbjct: 100 KSEESCRRASRKYARIVEKLGYQAKSVVFEIQNIVATCNVRFSINLGGISFTHLKFCTFE 159
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
PE+FPGL YRM QPK+ ++IF SGK+ ITGAK +++ TAF +IYP+L
Sbjct: 160 PEIFPGLHYRMLQPKVTIVIFPSGKLNITGAKNKEDIDTAFRHIYPIL 207
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
V ++NIV+T N+ ++L I+ + + P+ F + R+ +PK T +IF SGK+
Sbjct: 127 VFEIQNIVATCNVRFSINLGGISFTHLKFCTFEPEIFPGLHYRMLQPKVTIVIFPSGKLN 186
Query: 72 CTGAKSEQQSKLAARKYARIIQK 94
TGAK+++ A R I++K
Sbjct: 187 ITGAKNKEDIDTAFRHIYPILRK 209
>gi|378755540|gb|EHY65566.1| TATA-binding protein, partial [Nematocida sp. 1 ERTm2]
Length = 159
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 119/136 (87%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + +++NIV+TVNL C+LDLK IAL ARNAEYNPKRFAAVI+RIR+P+TTALIFASGKM
Sbjct: 22 GLIPTIQNIVATVNLCCRLDLKAIALGARNAEYNPKRFAAVIIRIRKPRTTALIFASGKM 81
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
V TGA+SE+ SK+AA+KY+ II++LG+P +F +FKIQNIV SCD KF IRLEGL + H
Sbjct: 82 VVTGARSEEDSKMAAKKYSIIIRRLGYPVRFTEFKIQNIVSSCDTKFSIRLEGLVFGHSN 141
Query: 131 FSSYEPELFPGLIYRM 146
+SSYEPELFPGLIYRM
Sbjct: 142 YSSYEPELFPGLIYRM 157
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSS-YEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
IQNIV + V RL+ A + GA ++ Y P+ F +I R+++P+ LIF SGK+V+T
Sbjct: 27 IQNIVAT--VNLCCRLDLKAIALGARNAEYNPKRFAAVIIRIRKPRTTALIFASGKMVVT 84
Query: 165 GAKVRDETYTAFENI--------YPV-LTEFR 187
GA+ +++ A + YPV TEF+
Sbjct: 85 GARSEEDSKMAAKKYSIIIRRLGYPVRFTEFK 116
>gi|351694348|gb|EHA97266.1| TATA box-binding protein-like protein 2 [Heterocephalus glaber]
Length = 354
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 110/121 (90%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 205 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 264
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDV+F IRLEGL +H
Sbjct: 265 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQ 324
Query: 131 F 131
F
Sbjct: 325 F 325
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 209 QLQNIVSTVNLACKLDLKKIAL-HAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 267
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 268 GAKSEEQSRLA 278
>gi|66359858|ref|XP_627107.1| TATA-box factor binding protein [Cryptosporidium parvum Iowa II]
gi|38491418|gb|AAR21861.1| TATA-binding protein [Cryptosporidium parvum]
gi|46228532|gb|EAK89402.1| TATA-box factor binding protein [Cryptosporidium parvum Iowa II]
gi|323509817|dbj|BAJ77801.1| cgd8_2030 [Cryptosporidium parvum]
Length = 249
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 133/178 (74%), Gaps = 5/178 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NI+++V+L C+LDL+ IA+ ARNAEYNPK+ AV+MR+R+PK T L+F SG+++ TGA
Sbjct: 72 IQNIIASVHLQCELDLRMIAISARNAEYNPKKVNAVVMRLRDPKCTGLLFRSGRLMITGA 131
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+ E +KL +K A+I QK GFP KF +FK++NI+ + D KFPIRLEGLAY H F +Y
Sbjct: 132 RLENDAKLGGKKMAKICQKSGFPKVKFTNFKMENIIATADCKFPIRLEGLAYDHRDFCNY 191
Query: 135 EPELFPGLIYRMKQP----KIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGL+YR K VLL+FVSGK+++TG K E F+NIYPVL ++RK
Sbjct: 192 EPELFPGLVYRYHPDNSPTKAVLLLFVSGKVIVTGCKNYQEICNVFDNIYPVLCQYRK 249
>gi|67611070|ref|XP_667132.1| TATA-binding protein [Cryptosporidium hominis TU502]
gi|54658235|gb|EAL36903.1| TATA-binding protein [Cryptosporidium hominis]
Length = 249
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 133/178 (74%), Gaps = 5/178 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NI+++V+L C+LDL+ IA+ ARNAEYNPK+ AV+MR+R+PK T L+F SG+++ TGA
Sbjct: 72 IQNIIASVHLQCELDLRMIAISARNAEYNPKKVNAVVMRLRDPKCTGLLFRSGRLMITGA 131
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+ E +KL +K A+I QK GFP KF +FK++NI+ + D KFPIRLEGLAY H F +Y
Sbjct: 132 RLENDAKLGGKKMAKICQKSGFPKVKFTNFKMENIIATADCKFPIRLEGLAYDHRDFCNY 191
Query: 135 EPELFPGLIYRMKQP----KIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGL+YR K VLL+FVSGK+++TG K E F+NIYPVL ++RK
Sbjct: 192 EPELFPGLVYRYHPDNSPTKAVLLLFVSGKVIVTGCKNYQEICNVFDNIYPVLCQYRK 249
>gi|118789378|ref|XP_317373.3| AGAP008084-PA [Anopheles gambiae str. PEST]
gi|116123189|gb|EAA12691.4| AGAP008084-PA [Anopheles gambiae str. PEST]
Length = 200
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 119/145 (82%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+N V+TV++ C+L+LK I + RN+EYNP RF V+MRIR+P+ TAL+F SGK++CTGA
Sbjct: 56 VRNCVATVSVGCELNLKTINFRTRNSEYNPSRFHGVVMRIRDPRCTALVFRSGKVICTGA 115
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+EQQ+ L RK+ RIIQKLGF KF DFK+QN+V + D++FPIRLE L HG FSSYE
Sbjct: 116 KNEQQAHLGLRKFVRIIQKLGFDVKFLDFKVQNLVATADLRFPIRLENLNQVHGQFSSYE 175
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGK 160
PELFPGLIYRM +P++VLLIFV+GK
Sbjct: 176 PELFPGLIYRMVKPRVVLLIFVNGK 200
Score = 42.4 bits (98), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
++N V + V + L+ + + S Y P F G++ R++ P+ L+F SGK++ TG
Sbjct: 56 VRNCVATVSVGCELNLKTINF-RTRNSEYNPSRFHGVVMRIRDPRCTALVFRSGKVICTG 114
Query: 166 AKVRDETY 173
AK + +
Sbjct: 115 AKNEQQAH 122
>gi|209877002|ref|XP_002139943.1| TATA-box-binding protein [Cryptosporidium muris RN66]
gi|209555549|gb|EEA05594.1| TATA-box-binding protein, putative [Cryptosporidium muris RN66]
Length = 211
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 135/183 (73%), Gaps = 5/183 (2%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G + ++NI+++V+L C+LDL+ IA+ ARNAEYNPK+ AV+MR+REP+ T L+F SG+M
Sbjct: 29 GVMPEIQNIIASVHLQCELDLRSIAISARNAEYNPKKVNAVVMRLREPRCTGLLFRSGRM 88
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
+ TGA++E ++ +K A+I QK G P KF +F+++N++ + D KFPIRLEGLAY H
Sbjct: 89 MITGARNENDARYGGKKMAKICQKSGHPRVKFSNFRMENMIATADCKFPIRLEGLAYDHR 148
Query: 130 AFSSYEPELFPGLIYRMKQP----KIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
F +YEPELFPGL+YR K V+L+FVSGK+++TG + E + F+NIYPVL +
Sbjct: 149 EFCNYEPELFPGLVYRYHPENSPTKAVILLFVSGKVIVTGCRSYKEICSVFDNIYPVLCQ 208
Query: 186 FRK 188
+RK
Sbjct: 209 YRK 211
>gi|116195450|ref|XP_001223537.1| hypothetical protein CHGG_04323 [Chaetomium globosum CBS 148.51]
gi|88180236|gb|EAQ87704.1| hypothetical protein CHGG_04323 [Chaetomium globosum CBS 148.51]
Length = 242
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 130/170 (76%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V+TV+L C+LDL+ I+ QARN EYN ++F A+IMRIREP+TT L+F+SGKMV TGA
Sbjct: 37 IQNVVATVDLGCRLDLRLISEQARNVEYNRRKFHALIMRIREPRTTTLVFSSGKMVITGA 96
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE +KLAARK+AR +QK GF F DFK+QN VGS F IRLE +A+ + + YE
Sbjct: 97 KSEALAKLAARKHARALQKCGFGTGFSDFKVQNYVGSATCDFLIRLERIAHMYRESAMYE 156
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
PELFPGL+Y M +PK+ L+F +GKIV+TGAK ++ AF N+YP+L E
Sbjct: 157 PELFPGLVYTMLRPKLKCLVFSTGKIVLTGAKAVEDIQEAFANLYPLLLE 206
>gi|126723804|gb|ABO26816.1| TATA-box binding protein, partial [Perna canaliculus]
Length = 111
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/110 (86%), Positives = 103/110 (93%)
Query: 27 CKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAAR 86
CKLDLK+IAL ARNAEYNPKRFAAVIMRIR+P+TTALIF+SGKMVCTGAKSE Q+KLAAR
Sbjct: 2 CKLDLKRIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEDQAKLAAR 61
Query: 87 KYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
KYARI+QKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +HG FSSYEP
Sbjct: 62 KYARIVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEP 111
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
H + Y P+ F +I R++ P+ LIF SGK+V TGAK D+ A
Sbjct: 12 HARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEDQAKLA 59
>gi|440295403|gb|ELP88316.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 236
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 128/176 (72%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV LDC ++L+ + + RNAEYNPKRF A+I+RI PKTTAL+F SGK+V TG
Sbjct: 61 IQNIVATVELDCNVNLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVITGG 120
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+ S+LA RKYARI+Q+LG+ KF FK+QN+V SCD+KF I L L + YE
Sbjct: 121 KTIDDSRLAGRKYARILQRLGYEVKFNHFKVQNVVASCDMKFAISLRDLITLSPKNTKYE 180
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
PE+FPG++YR+ +PK+VLLIF SGKIV TG K ++ AF+ IY +L + +++
Sbjct: 181 PEIFPGVVYRLAEPKMVLLIFASGKIVFTGGKEVEQINQAFKTIYKILLQVASIEK 236
>gi|67479107|ref|XP_654935.1| TATA binding protein [Entamoeba histolytica HM-1:IMSS]
gi|296439771|sp|A7UFC2.1|TBPL1_ENTHI RecName: Full=TATA-box-binding protein-like protein 1; Short=EhTRF1
gi|56472030|gb|EAL49549.1| TATA binding protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|155007635|gb|ABS89251.1| TBP-related factor [Entamoeba histolytica]
gi|407041324|gb|EKE40663.1| transcription initiation factor TFIID family protein [Entamoeba
nuttalli P19]
gi|449703269|gb|EMD43751.1| TBPrelated factor, putative [Entamoeba histolytica KU27]
Length = 216
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 124/170 (72%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV LDC ++L+ + + RNAEYNPKRF A+I+RI PKTTAL+F SGK+V TG
Sbjct: 41 IQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVVTGG 100
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+ S+LA RKYARI+Q+LG+ KF FKIQN+V SCD+KF I L+ L + YE
Sbjct: 101 KTVDDSRLAGRKYARILQRLGYNVKFNHFKIQNVVASCDMKFAISLKELIQLAPKITKYE 160
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
PE+FPG++YR+ PK+VLLIF SGKIV TG K ++ AF IY +L +
Sbjct: 161 PEIFPGVVYRLADPKMVLLIFASGKIVFTGGKEIEQINKAFSEIYKILLQ 210
>gi|167386161|ref|XP_001737643.1| TATA-box-binding protein [Entamoeba dispar SAW760]
gi|165899478|gb|EDR26064.1| TATA-box-binding protein, putative [Entamoeba dispar SAW760]
Length = 216
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 124/170 (72%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV LDC ++L+ + + RNAEYNPKRF A+I+RI PKTTAL+F SGK+V TG
Sbjct: 41 IQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVVTGG 100
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K+ S+LA RKYARI+Q+LG+ KF FKIQN+V SCD+KF I L+ L + YE
Sbjct: 101 KTVDDSRLAGRKYARILQRLGYNVKFNHFKIQNVVASCDMKFAISLKELIQLAPKITKYE 160
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
PE+FPG++YR+ PK+VLLIF SGKIV TG K ++ AF IY +L +
Sbjct: 161 PEIFPGVVYRLADPKMVLLIFASGKIVFTGGKEIEQINKAFSEIYKILLQ 210
>gi|167387403|ref|XP_001738146.1| TATA-box-binding protein [Entamoeba dispar SAW760]
gi|165898721|gb|EDR25505.1| TATA-box-binding protein [Entamoeba dispar SAW760]
Length = 212
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VST L KL+L+KI +ARNAEYNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 36 NVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 95
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
++SK+A++KYA+II+K+G+P + +F +QNIVGSCDVKF I L L S+ AF YEPE
Sbjct: 96 IEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRALVDSYLAFCQYEPE 155
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+FPGL+YRM PK+ LL+F +GK+V+TGAK + A++NIYP+L RK
Sbjct: 156 VFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANRK 206
>gi|67473541|ref|XP_652533.1| transcription initiation factor TFIID [Entamoeba histolytica
HM-1:IMSS]
gi|296439770|sp|C4M7H7.1|TBP2_ENTHI RecName: Full=TATA-box-binding protein 2; Short=EhTBP2; AltName:
Full=TATA sequence-binding protein; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|56469391|gb|EAL47145.1| transcription initiation factor TFIID, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 212
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VST L KL+L+KI +ARNAEYNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 36 NVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 95
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
++SK+A++KYA+II+K+G+P + +F +QNIVGSCDVKF I L L S+ AF YEPE
Sbjct: 96 IEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSYLAFCQYEPE 155
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+FPGL+YRM PK+ LL+F +GK+V+TGAK + A++NIYP+L RK
Sbjct: 156 VFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANRK 206
>gi|167387263|ref|XP_001738088.1| TATA-box-binding protein [Entamoeba dispar SAW760]
gi|165898834|gb|EDR25598.1| TATA-box-binding protein, putative [Entamoeba dispar SAW760]
Length = 234
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VST L KL+L+KI +ARNAEYNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 58 NVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 117
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
++SK+A++KYA+II+K+G+P + +F +QNIVGSCDVKF I L L S+ AF YEPE
Sbjct: 118 IEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRALVDSYLAFCQYEPE 177
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+FPGL+YRM PK+ LL+F +GK+V+TGAK + A++NIYP+L RK
Sbjct: 178 VFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANRK 228
>gi|183235483|ref|XP_001914239.1| transcription initiation factor TFIID [Entamoeba histolytica
HM-1:IMSS]
gi|3915894|sp|P52653.2|TBP1_ENTHI RecName: Full=TATA-box-binding protein 1; Short=EhTBP; AltName:
Full=TATA sequence-binding protein; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|3201503|emb|CAA88304.1| TATA box-binding protein [Entamoeba histolytica]
gi|169800528|gb|EDS88986.1| transcription initiation factor TFIID, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449703333|gb|EMD43805.1| transcription initiation factor tfiid, putative [Entamoeba
histolytica KU27]
Length = 234
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VST L KL+L+KI +ARNAEYNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 58 NVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 117
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
++SK+A++KYA+II+K+G+P + +F +QNIVGSCDVKF I L L S+ AF YEPE
Sbjct: 118 IEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSYLAFCQYEPE 177
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+FPGL+YRM PK+ LL+F +GK+V+TGAK + A++NIYP+L RK
Sbjct: 178 VFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANRK 228
>gi|145494864|ref|XP_001433426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400543|emb|CAK66029.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 129/177 (72%), Gaps = 4/177 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTV+L +L+L I+ AR AEYNPKRF+AVIMR+ P TTALIF SGKMVCTGA
Sbjct: 27 IQNVVSTVDLGTELNLVVISNGARMAEYNPKRFSAVIMRLNNPSTTALIFQSGKMVCTGA 86
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLA--YSHGAFSS 133
KSE QS +AARKYA+IIQKLGFPA FK+F IQNIV S D + PI+L+ +
Sbjct: 87 KSEDQSLVAARKYAKIIQKLGFPAVFKNFTIQNIVASFDFRKPIKLDEFTKDQQYRPVVQ 146
Query: 134 YEPELFPGLIYR--MKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE+FPGLI+R Q KI LLIFVSG+ VITG K ++ F+ I P+L +F+K
Sbjct: 147 YEPEIFPGLIFRKITDQKKITLLIFVSGRCVITGGKKTEDLNNVFKFILPILDQFKK 203
>gi|367044928|ref|XP_003652844.1| hypothetical protein THITE_2046631 [Thielavia terrestris NRRL 8126]
gi|347000106|gb|AEO66508.1| hypothetical protein THITE_2046631 [Thielavia terrestris NRRL 8126]
Length = 224
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 133/172 (77%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V+TVNLDC+LDL IA QARN EY K+F A++MRIREP+TT L+FASG+MV GA
Sbjct: 48 IQNVVATVNLDCRLDLTLIAQQARNVEYRRKKFHALVMRIREPRTTTLVFASGRMVVAGA 107
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KS + ++LAAR++AR IQK GF +F+DF +QN VGS FPIRLEG+A + ++ +E
Sbjct: 108 KSAELARLAARRHARAIQKCGFRTRFRDFAVQNFVGSAACGFPIRLEGIARQYWEWARHE 167
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PE+FPGL++ +++P + L+F +GK+V+TGAK D+ + AF +YPVL +++
Sbjct: 168 PEIFPGLVFTVQKPSLKCLVFTTGKVVLTGAKCEDDVHEAFAYLYPVLLDYK 219
>gi|398412558|ref|XP_003857600.1| hypothetical protein MYCGRDRAFT_32491 [Zymoseptoria tritici IPO323]
gi|339477485|gb|EGP92576.1| hypothetical protein MYCGRDRAFT_32491 [Zymoseptoria tritici IPO323]
Length = 177
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 123/174 (70%), Gaps = 1/174 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
V N+V+ VNL+C+LDLK IAL RNA Y PKRF AV++R REP++TALIF SGKM G
Sbjct: 4 QVHNVVAGVNLNCRLDLKHIALSVRNASYRPKRFPAVVVRQREPRSTALIFRSGKMQIVG 63
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS ++LA RK+AR++QKLG+ +F+DF +QN+V + D + I LEGL + G +Y
Sbjct: 64 TKSVDDARLAGRKFARMLQKLGYQPRFEDFTVQNMVANVDTRMTIHLEGLMLTPGT-HNY 122
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPG +RM P + L+F SGK+V+ AK ++ + A++ YP+L +FRK
Sbjct: 123 EPELFPGAAFRMVDPLVTFLVFHSGKVVLLKAKNEEDMHEAWDKFYPLLMQFRK 176
>gi|444728636|gb|ELW69085.1| TATA-box-binding protein [Tupaia chinensis]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/112 (79%), Positives = 100/112 (89%)
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
E+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL +H FSSYEPE
Sbjct: 201 EEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPE 260
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
LFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 261 LFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 312
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L + + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 229 IQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG 288
Query: 75 AK 76
AK
Sbjct: 289 AK 290
>gi|1078776|pir||S52407 TATA box-binding protein - Entamoeba histolytica
Length = 233
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 128/171 (74%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VS L KL+L+KI +A NA YNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 57 NVVSRFQLGVKLELRKIVQKAINAIYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 116
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
++SK+A++KYA+II+K+G+P + +F +QNIVGSCDVKF I L L S AF YEPE
Sbjct: 117 IEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSDLAFCQYEPE 176
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+FPGL+YRM PK+ LL+F +GK+V+TGAK + A++NIYP+L RK
Sbjct: 177 VFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANRK 227
>gi|367033977|ref|XP_003666271.1| hypothetical protein MYCTH_2310794 [Myceliophthora thermophila ATCC
42464]
gi|347013543|gb|AEO61026.1| hypothetical protein MYCTH_2310794 [Myceliophthora thermophila ATCC
42464]
Length = 242
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V +++N+V+T +L+C+LDL+ IA ARN EYN ++F A++MRIREP+TT L+FASG+MV
Sbjct: 51 VPTIQNVVATASLECRLDLQAIAQHARNVEYNRRKFHALVMRIREPRTTTLVFASGRMVV 110
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
TGAKS ++LAAR++AR IQK GFP + DF++QN VGS F +RLE +++ + +
Sbjct: 111 TGAKSAGLARLAARRHARAIQKCGFPTRLADFRVQNFVGSAACGFLVRLERISHRYWQSA 170
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
+EPELFPGL+Y M +P + L+F +GK+V+TGAK R++ + AF N+YP+L E KV+Q
Sbjct: 171 RHEPELFPGLVYTMVRPSLKCLVFTTGKVVLTGAKKREDVFEAFANLYPLLLEA-KVEQ 228
>gi|171691522|ref|XP_001910686.1| hypothetical protein [Podospora anserina S mat+]
gi|170945709|emb|CAP71822.1| unnamed protein product [Podospora anserina S mat+]
Length = 223
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 130/185 (70%), Gaps = 10/185 (5%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ ++N V TVNLDC++DL +A +ARN EY P+RF AVIMRIR+P+TTALIFA+G+MV
Sbjct: 28 IPKLQNFVVTVNLDCRIDLNYLAQRARNVEYRPRRFNAVIMRIRDPRTTALIFATGRMVV 87
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF- 131
TGAKSE ++LAA+K+ +QK GF KF+DF +QNI+GS +V F IRLEGLA +
Sbjct: 88 TGAKSEALARLAAKKHTYALQKCGFTPKFRDFTVQNIIGSANVGFNIRLEGLANKYVTVG 147
Query: 132 SSYEPELFPGLIYRM-------KQPKI--VLLIFVSGKIVITGAKVRDETYTAFENIYPV 182
+S+ PE+FPGL ++ P+ LLIF +GKIV+TGAK ++ AF +YP+
Sbjct: 148 ASFVPEIFPGLSFKQYLGYRADGTPRSCPTLLIFTTGKIVVTGAKTEEDFRAAFARVYPL 207
Query: 183 LTEFR 187
+FR
Sbjct: 208 FFDFR 212
>gi|298710178|emb|CBJ26253.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 358
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 129/188 (68%), Gaps = 14/188 (7%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMV 71
S+ N+ +T ++ C +DLK + ++ARNAEYNPKRF+A I+R+ EPK TAL+F +GK+V
Sbjct: 134 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVV 193
Query: 72 CTGAKSEQQSKLAARKYARIIQKL----GFPAK------FKDFKIQNIVGSCDVKFPIRL 121
TG++S A + +ARI+ KL G P+ +D ++QN+V + DV FPIRL
Sbjct: 194 VTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRL 253
Query: 122 EGL-AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIY 180
EGL A + G F +YEPELFPGLIYRMK PKI LIFVSGK+V+TGAK + F+ +Y
Sbjct: 254 EGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMY 313
Query: 181 PVLTEFRK 188
P L +F+K
Sbjct: 314 PTLCQFKK 321
>gi|294939318|ref|XP_002782410.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239894016|gb|EER14205.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 130/162 (80%), Gaps = 2/162 (1%)
Query: 29 LDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKY 88
+DLKK+A +ARNAEYNP++ AV++R R+PK TA+++ +GK++ TG+ SE+ +K AA+K
Sbjct: 112 IDLKKVAFKARNAEYNPRKVNAVVIRFRDPKATAMLYGTGKVMVTGSNSEETAKDAAKKV 171
Query: 89 ARIIQKLG-FP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRM 146
A+I+ K G +P A+F+ FKI+N+V S DV+FPIRLE LAY H ++ SYEPEL+PGL++R+
Sbjct: 172 AKIVIKSGAYPQARFRRFKIENMVASADVRFPIRLEALAYEHRSYCSYEPELYPGLVFRL 231
Query: 147 KQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+PK+ LLIFVSGKIV TGAK RD+ AF NIYP+L +++
Sbjct: 232 FEPKVALLIFVSGKIVFTGAKNRDDITNAFRNIYPLLLKYQN 273
>gi|294939316|ref|XP_002782409.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239894015|gb|EER14204.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 302
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 130/162 (80%), Gaps = 2/162 (1%)
Query: 29 LDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKY 88
+DLKK+A +ARNAEYNP++ AV++R R+PK TA+++ +GK++ TG+ SE+ +K AA+K
Sbjct: 141 IDLKKVAFKARNAEYNPRKVNAVVIRFRDPKATAMLYGTGKVMVTGSNSEETAKDAAKKV 200
Query: 89 ARIIQKLG-FP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRM 146
A+I+ K G +P A+F+ FKI+N+V S DV+FPIRLE LAY H ++ SYEPEL+PGL++R+
Sbjct: 201 AKIVIKSGAYPQARFRRFKIENMVASADVRFPIRLEALAYEHRSYCSYEPELYPGLVFRL 260
Query: 147 KQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+PK+ LLIFVSGKIV TGAK RD+ AF NIYP+L +++
Sbjct: 261 FEPKVALLIFVSGKIVFTGAKNRDDITNAFRNIYPLLLKYQN 302
>gi|410989830|ref|XP_004001158.1| PREDICTED: TATA box-binding protein-like protein 2-like [Felis
catus]
Length = 135
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 99/111 (89%)
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
E+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H FSSYEPE
Sbjct: 24 EEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPE 83
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
LFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 84 LFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 134
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L + + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 52 IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 111
Query: 75 AKSEQQ 80
AK +
Sbjct: 112 AKERSE 117
>gi|440294161|gb|ELP87178.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 233
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VST L+ +LDL+KI +ARNAEYNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 56 NVVSTFQLNQQLDLRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 115
Query: 78 EQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++SK+AA+KYA+II+K+G+ +F +F +QNIVGSCDVKF I L L S+ YEP
Sbjct: 116 IEESKIAAKKYAKIIKKIGYNEVRFSNFNVQNIVGSCDVKFQISLRSLYDSNTDMCQYEP 175
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E+FPGL++RM QPK+ LL+F +GK+V+TGAK + TA+ IYP+L +K
Sbjct: 176 EVFPGLVFRMTQPKVTLLVFSTGKVVLTGAKDDESLNTAYTKIYPILLANKK 227
>gi|440298942|gb|ELP91557.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 233
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+VST L+ +LDL+KI +ARNAEYNPKRFA IMRI PK+TALIF +GK+VCTG +S
Sbjct: 56 NVVSTFQLNQQLDLRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRS 115
Query: 78 EQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++SK+AA+KYA+II+K+G+ +F +F +QNIVGSCDVKF I L L S+ YEP
Sbjct: 116 IEESKIAAKKYAKIIKKIGYNEVRFSNFNVQNIVGSCDVKFQISLRSLYDSNTDMCQYEP 175
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E+FPGL++RM QPK+ LL+F +GK+V+TGAK + TA+ IYP+L +K
Sbjct: 176 EVFPGLVFRMTQPKVTLLVFSTGKVVLTGAKDDESLNTAYTKIYPILLANKK 227
>gi|195964300|gb|ACG60161.1| TATA binding protein [Notothenia coriiceps]
Length = 171
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/102 (84%), Positives = 96/102 (94%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 70 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 129
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGS
Sbjct: 130 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS 171
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 74 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 132
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 133 GAKSEEQSRLA 143
>gi|291191925|gb|ADD83026.1| TATA box binding protein [Gobiocypris rarus]
Length = 224
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/101 (84%), Positives = 95/101 (94%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 124 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 183
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 111
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VG
Sbjct: 184 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVG 224
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 128 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 186
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 187 GAKSEEQSRLA 197
>gi|195964298|gb|ACG60160.1| TATA binding protein [Chaenocephalus aceratus]
Length = 173
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 95/102 (93%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV TVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 72 GIVPQLQNIVPTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 131
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGS
Sbjct: 132 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS 173
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 76 QLQNIVPTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 134
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 135 GAKSEEQSRLA 145
>gi|195964302|gb|ACG60162.1| TATA binding protein [Chionodraco rastrospinosus]
Length = 173
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 95/102 (93%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 72 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 131
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
VC GAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQN+VGS
Sbjct: 132 VCAGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS 173
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V
Sbjct: 76 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCA 134
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 135 GAKSEEQSRLA 145
>gi|374719192|gb|AEZ67282.1| TBP, partial [Eidolon helvum]
gi|374719194|gb|AEZ67283.1| TBP, partial [Myotis daubentonii]
gi|374719196|gb|AEZ67284.1| TBP, partial [Pipistrellus sp. DR-2011]
Length = 96
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 92/94 (97%)
Query: 31 LKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYAR 90
LK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+LAARKYAR
Sbjct: 1 LKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYAR 60
Query: 91 IIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 124
++QKLGFPAKF DFKIQN+VGSCDVKFPIRLEGL
Sbjct: 61 VVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGL 94
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R+++P+ LIF SGK+V TGAK +++ A
Sbjct: 11 AEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLA 54
>gi|8777983|gb|AAF79168.1| TATA-box binding protein 1 [Habrotrocha constricta]
Length = 108
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 93/107 (86%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
L C LDLK+IALQARNAEYNPKRFAAVIMRIR P+TTALIF SGKMVCTGAKSE+ S A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMRIRNPRTTALIFGSGKMVCTGAKSEEDSLQA 60
Query: 85 ARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
AR+YAR+IQKLGFPAKF+DFKIQN+VGS DVKFPIRLE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R++ P+ LIF SGK+V TGAK +++ A
Sbjct: 17 AEYNPKRFAAVIMRIRNPRTTALIFGSGKMVCTGAKSEEDSLQA 60
>gi|8777977|gb|AAF79165.1|AF249988_1 TATA-box binding protein 1 [Philodina roseola]
Length = 108
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 92/107 (85%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
L C LDLK+IALQARNAEYNPKRFAAVIMRIR P+TTALIF SGKMVCTGAKSE S A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKSENDSLQA 60
Query: 85 ARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
AR+YAR+IQKLGFPAKF+DFKIQN+VGS DVKFPIRLE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R++ P+ LIF SGK+V TGAK +++ A
Sbjct: 17 AEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKSENDSLQA 60
>gi|8777979|gb|AAF79166.1| TATA-box binding protein 2 [Macrotrachela quadricornifera]
gi|8777981|gb|AAF79167.1| TATA-box binding protein 2 [Philodina roseola]
Length = 108
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 92/107 (85%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
L C LDLK+IALQARNAEYNPKRFAAVIMRIR P+TTALIF SGKMVCTGAKSE S A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKSENXSLQA 60
Query: 85 ARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
AR+YAR+IQKLGFPAKF+DFKIQN+VGS DVKFPIRLE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R++ P+ LIF SGK+V TGAK + + A
Sbjct: 17 AEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKSENXSLQA 60
>gi|300120388|emb|CBK19942.2| unnamed protein product [Blastocystis hominis]
Length = 199
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 123/181 (67%), Gaps = 4/181 (2%)
Query: 13 VSSVK--NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
+S+VK NIVSTVN+ +++L ++ + RN EYNPKRF A+IMRIREPK TAL+F SGK+
Sbjct: 19 LSTVKPSNIVSTVNMKKEINLPEVVDKLRNTEYNPKRFDAMIMRIREPKCTALVFKSGKV 78
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK--IQNIVGSCDVKFPIRLEGLAYSH 128
V G KS + ++ A R+ I+ + K D K I N+V D KFPIRLEGL+ +
Sbjct: 79 VLAGTKSTKDTEAAGRRVVDILSRFTGGNKSDDTKPIIHNMVAVGDFKFPIRLEGLSIEY 138
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
++YEPELF GLIYRMK P +VLLIFVSGK+V+TGAK + AF I P++ RK
Sbjct: 139 LESTTYEPELFSGLIYRMKNPDVVLLIFVSGKVVVTGAKDESDIRQAFRKISPLIYNCRK 198
Query: 189 V 189
V
Sbjct: 199 V 199
>gi|390986539|gb|AFM35789.1| hypothetical protein, partial [Oryza eichingeri]
Length = 88
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/88 (96%), Positives = 86/88 (97%)
Query: 47 RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKI 106
RFAAVIMRIREPKTTALIFASGKMVCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKI
Sbjct: 1 RFAAVIMRIREPKTTALIFASGKMVCTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKI 60
Query: 107 QNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
QNIVGSCDVKFPIRLEGLAYSHGAFSSY
Sbjct: 61 QNIVGSCDVKFPIRLEGLAYSHGAFSSY 88
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 139 FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
F +I R+++PK LIF SGK+V TGAK D + A
Sbjct: 2 FAAVIMRIREPKTTALIFASGKMVCTGAKSEDHSKLA 38
>gi|328705141|ref|XP_001943046.2| PREDICTED: TATA box-binding protein-like protein 2-like
[Acyrthosiphon pisum]
Length = 343
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V+NIV N+ C LDL +I + N+EYNP+RF +IMR+R P T+L+F SGKM
Sbjct: 165 GQSIQVQNIVCGANMGCPLDLVRIVMWTSNSEYNPQRFNGLIMRLRTPNVTSLLFPSGKM 224
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
+ GAK ++ L RK A+I+++LG +F D+ + NIV + DV FPI LE L +H
Sbjct: 225 IMQGAKDDRTGNLGCRKVAKILERLGHNVQFCDYTVHNIVCTWDVGFPIMLEELNTAHSQ 284
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F+S+EPE+FP LIYRM +P+ V L+FV+GK+V+TG K + + + + VL FRK
Sbjct: 285 FTSFEPEVFPALIYRMVKPRAVFLMFVNGKVVLTGLKTKADIKESVFLMQDVLNNFRKT 343
>gi|242247621|ref|NP_001156189.1| TATA-box-binding protein-like [Acyrthosiphon pisum]
gi|239791994|dbj|BAH72388.1| ACYPI005546 [Acyrthosiphon pisum]
Length = 331
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 115/174 (66%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV N+ C LDL +I + N+EYNP RF +IMR+R P T+L+F SGKM+ GA
Sbjct: 158 VQNIVCGANMGCPLDLVRIVMWTSNSEYNPLRFNGLIMRLRTPNVTSLLFPSGKMIMQGA 217
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
K ++ L RK A+I+++LG KF D+ + NIV + DV FPI LE L +H F+S+E
Sbjct: 218 KDDRTGNLGCRKVAKILERLGHNVKFSDYTVHNIVCTWDVGFPIMLEELNTAHSQFTSFE 277
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE+FP LIYRM +P+ V L+FV+GK+V+TG K + + + + VL F+K
Sbjct: 278 PEVFPALIYRMVKPRAVFLMFVNGKVVLTGLKTKSDIKESVFLMQDVLNSFKKT 331
>gi|8777987|gb|AAF79170.1| TATA-box binding protein [Brachionus plicatilis]
Length = 109
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 93/109 (85%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
L C L+LKKIAL ARNAEYNPKRFAAVIMRIR P+TTALIF+SGKMVCTGAKSE+ S+LA
Sbjct: 1 LGCNLELKKIALYARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEEDSRLA 60
Query: 85 ARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
ARKYARIIQKLGFPAKF DFKIQNIVGS DV F +RLE H FSS
Sbjct: 61 ARKYARIIQKLGFPAKFMDFKIQNIVGSIDVGFCLRLECFHTCHSQFSS 109
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R++ P+ LIF SGK+V TGAK +++ A
Sbjct: 17 AEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEEDSRLA 60
>gi|7960166|gb|AAF71245.1| TA-TA binding protein 1 [Gallus gallus]
gi|7960168|gb|AAF71246.1| TA-TA binding protein 1 [Gallus gallus]
Length = 210
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 91/98 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 111 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 170
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQN 108
VCTGAKSE+QS+LAARKYAR++QKLGFPAKF DFKIQ
Sbjct: 171 VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQT 208
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 115 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 173
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 174 GAKSEEQSRLA 184
>gi|301113196|ref|XP_002998368.1| TATA-box-binding protein [Phytophthora infestans T30-4]
gi|262111669|gb|EEY69721.1| TATA-box-binding protein [Phytophthora infestans T30-4]
Length = 220
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 113/160 (70%)
Query: 28 KLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARK 87
++D+KK+AL RNA+Y P+ F+A++MR + P+ T L++ SGK V GA S +KLAA K
Sbjct: 39 RVDIKKLALLVRNADYAPRGFSALVMRFQAPRATVLLYRSGKFVVIGATSVADAKLAAEK 98
Query: 88 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMK 147
I++K+ FP+ F I+N+VGS DV F +RLEGLA H FS+YEPELFPGLIYRM
Sbjct: 99 LVSILKKVSFPSDNSPFTIRNVVGSADVCFRVRLEGLARDHLRFSTYEPELFPGLIYRML 158
Query: 148 QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
+PK LLIF+SGK+VITG + + A IYPVL ++R
Sbjct: 159 RPKCTLLIFISGKLVITGCESSADGERALGAIYPVLLQYR 198
>gi|8777985|gb|AAF79169.1| TATA-box binding protein 2 [Habrotrocha constricta]
Length = 108
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
L C+LDLK+IALQARNAEYNPKRFAAVIMRIR P+TTALIF+SGKMVCTGAKSE+ S A
Sbjct: 1 LGCQLDLKRIALQARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEEDSIQA 60
Query: 85 ARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
AR+YAR+IQKLGFPAKF DFKIQN+VGS DV F I+LE LA H +
Sbjct: 61 ARRYARVIQKLGFPAKFLDFKIQNMVGSADVSFKIQLEALALKHATY 107
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R++ P+ LIF SGK+V TGAK +++ A
Sbjct: 17 AEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEEDSIQA 60
>gi|119601082|gb|EAW80676.1| TATA box binding protein like 2, isoform CRA_b [Homo sapiens]
Length = 113
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 94/111 (84%)
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
++ + RKYAR++QKLGFPA+F DFKIQN+VGSCDV+FPIRLEGL +H FSSYEPE
Sbjct: 2 QKMQNITQRKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPE 61
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
LFPGLIYRM +P+IVLLIFVSGK+V+TGAK R E Y AFENIYP+L F+K
Sbjct: 62 LFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 112
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L + + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 30 IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 89
Query: 75 AKSEQQ 80
AK +
Sbjct: 90 AKERSE 95
>gi|348669793|gb|EGZ09615.1| hypothetical protein PHYSODRAFT_522103 [Phytophthora sojae]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 113/160 (70%)
Query: 28 KLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARK 87
K++++K+AL RNA+Y P+ F+A++MR +EP+ T L++ SGK V GA S SKLAA K
Sbjct: 42 KVNIEKLALLVRNADYAPRSFSALVMRFQEPRATVLVYRSGKFVVIGATSVDDSKLAADK 101
Query: 88 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMK 147
I +K+ FP+ F ++N+VGS DV F IRLEGLA H FS+YEPE+FPGLIYRM
Sbjct: 102 LVSIFKKVSFPSDCSPFTVRNVVGSSDVGFRIRLEGLARDHLRFSTYEPEMFPGLIYRML 161
Query: 148 QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
+PK LLIF+SGKIVITG + + A I+PVL ++R
Sbjct: 162 RPKCTLLIFISGKIVITGCESPAQGEKALGKIFPVLLQYR 201
>gi|8777975|gb|AAF79164.1|AF249987_1 TATA-box binding protein 1 [Macrotrachela quadricornifera]
Length = 108
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 91/107 (85%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
L C LDLK+IALQARNAEYNPKRFAAVIM IR P+TTALIF SGKMVCTGAKSE S A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMCIRSPRTTALIFGSGKMVCTGAKSENDSLQA 60
Query: 85 ARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
AR+YAR+IQKLGFPAKF+DFKIQN+VGS DVKFPIRLE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I ++ P+ LIF SGK+V TGAK +++ A
Sbjct: 17 AEYNPKRFAAVIMCIRSPRTTALIFGSGKMVCTGAKSENDSLQA 60
>gi|403220982|dbj|BAM39115.1| transcription initiation factor [Theileria orientalis strain
Shintoku]
Length = 276
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 133/197 (67%), Gaps = 9/197 (4%)
Query: 1 MLPYICYLILGAVSS-----VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRI 55
M Y C+L S+ V+NIV++V+L +LDL++IA+ RNAEYNPK+F A+++R+
Sbjct: 80 MSKYSCFLKANYQSNMCIPMVQNIVASVHLGQELDLREIAISTRNAEYNPKKFNALVLRM 139
Query: 56 REPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQK-LGFPAKFKDFKIQNIVGSCD 114
+ PK T LIF +G+++ TG+K+ + +KL A++ A++I+K LG KF +FKI+NI+ + +
Sbjct: 140 QNPKCTGLIFRTGRIIITGSKTIEDTKLGAKRMAKMIRKELGADLKFNNFKIENIIATFN 199
Query: 115 VKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDE 171
PIRLE + H S+YEPE F GL+YR + + VLLIFVSG ++ITG K E
Sbjct: 200 CNVPIRLEVFSQEHKELSNYEPEFFAGLVYRCRISESSEAVLLIFVSGNVIITGCKSAHE 259
Query: 172 TYTAFENIYPVLTEFRK 188
F+ +YP+L +++K
Sbjct: 260 IQYVFKTMYPILQQYQK 276
>gi|392522653|gb|AFM78115.1| TATA box-binding protein, partial [Skeletonema costatum]
Length = 114
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 95/114 (83%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASG+MV TG KS S LA RK+A I++++GF PA DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGRMVVTGTKSTHNSALATRKFAYILERVGFQPAGMLDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEGL Y+H FSSYEPELFPGLIYR+ QP++VLLIFVS
Sbjct: 61 KVQNIVGTVDVGFPIRLEGLVYAHPTFSSYEPELFPGLIYRLVQPRVVLLIFVS 114
>gi|195035138|ref|XP_001989048.1| GH10255 [Drosophila grimshawi]
gi|193905048|gb|EDW03915.1| GH10255 [Drosophila grimshawi]
Length = 314
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 120/175 (68%), Gaps = 2/175 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L+ IAL+ N EY + + MR+R P TTA I++SG++ CTGA
Sbjct: 26 ITNVVCSFSVRCHLNLQNIALKGSNVEYR-RENGMLTMRLRRPYTTASIWSSGRITCTGA 84
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YARI++ LGFP +F+ F++ N++ +C + +PI++ + + +SYE
Sbjct: 85 ISEMQAKVAARRYARILEHLGFPVRFQSFRVVNVLATCCMPWPIKIVNFSMHNREMASYE 144
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
PEL+PG+ YRM+ PK L IF +G I +T A V + TA + IYP++ EFR V+
Sbjct: 145 PELYPGVTYRMRNPKATLRIFSTGNITVTAASV-NAVETAVQRIYPLVNEFRSVR 198
>gi|195134909|ref|XP_002011879.1| GI14331 [Drosophila mojavensis]
gi|193909133|gb|EDW08000.1| GI14331 [Drosophila mojavensis]
Length = 656
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 265 INNVVCSFSVRCHLKLREIALNGSNVEYR-RENGMVTMKLRRPYTTASIWSSGRITCTGA 323
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YAR + KLGFP F++F+I N++G+C + + I++ + H +SYE
Sbjct: 324 TSESQAKIAARRYARCLSKLGFPTHFQNFRIVNVLGTCSMPWAIKIVNFSERHRDNASYE 383
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M++PK L IF +G I +T A V D +A ++IYP++ EFRK
Sbjct: 384 PELHPGVTYKMREPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEFRK 435
>gi|392522721|gb|AFM78149.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 95/114 (83%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIF+SG+MV TG KS S LA RK+A I++++GF PA DF
Sbjct: 1 RRFAAVIMRLREPRATALIFSSGRMVVTGTKSTHNSALATRKFAYILERVGFQPAGMLDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEGL ++H FSSYEPELFPGLIYR+ QP++VLLIFVS
Sbjct: 61 KVQNIVGTVDVGFPIRLEGLVFAHPTFSSYEPELFPGLIYRLVQPRVVLLIFVS 114
>gi|195393646|ref|XP_002055464.1| GJ19385 [Drosophila virilis]
gi|194149974|gb|EDW65665.1| GJ19385 [Drosophila virilis]
Length = 711
Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 282 INNVVCSFSVRCHLKLREIALNGSNVEYR-RENGMVTMKLRRPYTTASIWSSGRITCTGA 340
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YAR + KLGFP F++F+I N++G+C + + I++ + H +SYE
Sbjct: 341 TSESQAKIAARRYARCLSKLGFPTHFQNFRIVNVLGTCSMPWAIKIVNFSERHRDNASYE 400
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M++PK L IF +G I +T A V D +A ++IYP++ EFRK
Sbjct: 401 PELHPGVTYKMREPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEFRK 452
>gi|326432022|gb|EGD77592.1| TATA-box-binding protein [Salpingoeca sp. ATCC 50818]
Length = 271
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 134/234 (57%), Gaps = 57/234 (24%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREP------------- 58
+ + N+V+TVNL LDLK IA+ ARNA+Y P RF+A++MRIR+
Sbjct: 38 GLPEIVNVVATVNLGLTLDLKYIAMHARNAQYTPNRFSAMVMRIRDEEKQNTSHIASRRR 97
Query: 59 -----KTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKL------------------ 95
K TAL+FA+GK++CTG K ++++ AA+K+A+II+K+
Sbjct: 98 TGRPMKATALVFATGKLICTGTKGPEEARAAAKKFAKIIRKILHLERAEKAAAREAATAM 157
Query: 96 ---------------------GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+F FK+QN+V CD +FPIRLE L + FS+Y
Sbjct: 158 LTEHGGQRDHDDEEEEGEQEEAARVRFDGFKVQNMVAKCDCRFPIRLEALQAHYPVFSTY 217
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPELFPGL++RM +P+ V+L FVSGK+VITGAK R++ AF+NI +L FRK
Sbjct: 218 EPELFPGLVFRMAEPRCVVLCFVSGKLVITGAKSREQIQEAFDNICDMLKPFRK 271
>gi|326431087|gb|EGD76657.1| TATA box binding protein [Salpingoeca sp. ATCC 50818]
Length = 166
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 3/160 (1%)
Query: 11 GAVSS--VKNIVSTVNLD-CKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFAS 67
GA SS + NIV+T +L +L L++IA +A+N+EYNPKR++A+IMRI+EP TALIF++
Sbjct: 7 GANSSPNIVNIVATAHLSRTQLKLEEIAEKAKNSEYNPKRYSAIIMRIKEPSATALIFST 66
Query: 68 GKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
GK+V GAKSE+ + AAR++A+ I K G ++ KI N+VG D+ F + L+ L
Sbjct: 67 GKVVIMGAKSEEAAHAAARQFAQNITKAGTRVSLREIKIHNVVGRVDIGFKLHLDNLHVE 126
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
H A+S+Y+PE FPGL YRM++P +VLLIF SGKIV+T AK
Sbjct: 127 HPAWSTYDPESFPGLTYRMQEPDVVLLIFHSGKIVLTKAK 166
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 106 IQNIVGSCDV-KFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
I NIV + + + ++LE +A S Y P+ + +I R+K+P LIF +GK+VI
Sbjct: 14 IVNIVATAHLSRTQLKLEEIA-EKAKNSEYNPKRYSAIIMRIKEPSATALIFSTGKVVIM 72
Query: 165 GAKVRD 170
GAK +
Sbjct: 73 GAKSEE 78
>gi|325185920|emb|CCA20424.1| TATAboxbinding protein putative [Albugo laibachii Nc14]
Length = 203
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQA-RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
+KN+V + NL + DL + +++ + AE PK+ ++M+I P TTA++F++GK+V T
Sbjct: 10 DIKNVVCSANLGMRFDLTDLLIKSQKRAELVPKK-NCILMKIPSPDTTAMLFSNGKLVVT 68
Query: 74 GAKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
GA SE Q K AARK+ +IIQK+ +P DFKI+NI+G+CDV F I +E A +H +
Sbjct: 69 GANSEDQVKTAARKFTQIIQKMDYPGVNLIDFKIRNIIGNCDVGFRILMEKFAAAHASRC 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
YEPEL+P LIYR+ P + +L+FVSGK+V TG+K + + A E IYP+L +F +Q
Sbjct: 129 IYEPELYPALIYRLAHPSVKILVFVSGKVVFTGSKDPRDLHAACEQIYPLLVQFEDKKQ 187
>gi|392522723|gb|AFM78150.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFP-AKFKDF 104
+RFAAVIMR+REP+ TALIF+SG+MV TG KS S LA RK+A I++++GF A DF
Sbjct: 1 RRFAAVIMRLREPRATALIFSSGRMVVTGTKSTHNSALATRKFAYILERVGFQLAGMLDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEGL ++H FSSYEPELFPGLIYR+ QP++VLLIFVS
Sbjct: 61 KVQNIVGTVDVGFPIRLEGLVFAHPTFSSYEPELFPGLIYRLVQPRVVLLIFVS 114
>gi|195114322|ref|XP_002001716.1| GI15474 [Drosophila mojavensis]
gi|193912291|gb|EDW11158.1| GI15474 [Drosophila mojavensis]
Length = 442
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IAL N EY + V MR+R P TTA I++SG++ CTGA
Sbjct: 93 INNVVCSFSVRCHLKLREIALHGSNVEYR-RENGMVTMRLRRPYTTASIWSSGRITCTGA 151
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YAR + KLGFP +F+ F+I N++G+C + +PIR+ + H + YE
Sbjct: 152 ISESQAKVAARRYARSLSKLGFPVRFQQFRIVNVLGTCSMPWPIRIVNFSERHRESACYE 211
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PEL PG+ ++M+ PK L IF +G I +T A V + +A + +YP++ EFR
Sbjct: 212 PELHPGVTFKMQDPKATLKIFSTGSITVTAASV-NAVESAIQRLYPLVHEFR 262
>gi|195044570|ref|XP_001991843.1| GH11849 [Drosophila grimshawi]
gi|193901601|gb|EDW00468.1| GH11849 [Drosophila grimshawi]
Length = 689
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 116/173 (67%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 214 INNVVCSFSVRCHLKLREIALNGSNVEYR-RENGMVTMKLRRPYTTASIWSSGRITCTGA 272
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YAR + KLGFP F+ F+I N++G+C + + I++ + H +SYE
Sbjct: 273 TSELQAKIAARRYARCLGKLGFPTHFQHFRIVNVLGTCSMPWAIKIVNFSERHRDNASYE 332
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M++PK L IF +G I +T V D +A ++IYP++ EFRK
Sbjct: 333 PELHPGVTYKMREPKATLKIFSTGSITVTAPTVND-VESAIQHIYPLVHEFRK 384
>gi|345312931|ref|XP_001513505.2| PREDICTED: TATA box-binding protein-like protein 2-like
[Ornithorhynchus anatinus]
Length = 170
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 108/158 (68%), Gaps = 18/158 (11%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK+IALQARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 15 GTVPQLQNIVSTVNLACKLDLKRIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 74
Query: 71 VCTGAKSEQQSK---LAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
VCTG++ + AR R + F+D I S + P R +
Sbjct: 75 VCTGSQKRPTGNVFLVDARDGDRALATF----SFRDVSTVKISLS---RPPDRDD----- 122
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+YEPELFPGLIYRM +P+IVLLIFVSGK+V+TG
Sbjct: 123 ---IPTYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 157
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 19 QLQNIVSTVNLACKLDLKRIAL-QARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 77
Query: 165 GAKVR 169
G++ R
Sbjct: 78 GSQKR 82
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 20 VSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQ 79
VSTV K+ L + + Y P+ F +I R+ +P+ LIF SGK+V TG E
Sbjct: 107 VSTV----KISLSRPPDRDDIPTYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGESGEG 162
Query: 80 QSKLAA 85
L A
Sbjct: 163 PPVLEA 168
>gi|71033019|ref|XP_766151.1| transcription initiation factor TFIID [Theileria parva strain
Muguga]
gi|68353108|gb|EAN33868.1| transcription initiation factor TFIID, putative [Theileria parva]
Length = 222
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V V+NIV++V+L +LDL++IA+ RNAEYNPK+F A+++R++ PK T LIF +G+++
Sbjct: 43 VPMVQNIVASVHLGEELDLREIAISTRNAEYNPKKFNALVLRMQNPKCTGLIFRTGRIII 102
Query: 73 TGAKSEQQSKLAARKYARIIQK-LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TG+K+ + ++L ++ A++I+K G KF +FKI+NI+ + PIRLE + H
Sbjct: 103 TGSKTIEDTRLGGKRMAKMIRKETGLDLKFNNFKIENIIATFSCNVPIRLEVFSQEHKDL 162
Query: 132 SSYEPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
+YEPE F GL+YR + + + VLLIFVSG ++ITG K E F+ +YP+L +++
Sbjct: 163 CNYEPEFFAGLVYRCRINEESEAVLLIFVSGNVIITGCKSAQEIQYVFKTMYPILHQYQ 221
>gi|156083957|ref|XP_001609462.1| TATA-box binding protein [Babesia bovis T2Bo]
gi|154796713|gb|EDO05894.1| TATA-box binding protein [Babesia bovis]
Length = 277
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 126/177 (71%), Gaps = 4/177 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++V+L ++DL++IA+ RNAEYNP++F A+I+R++ P+ T L+F +G+++ TG
Sbjct: 101 VQNIVASVHLGNEIDLREIAISTRNAEYNPRKFNALILRMQNPRCTGLVFRTGRLIVTGC 160
Query: 76 KSEQQSKLAARKYARIIQK-LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
K+ + ++L A++ A+++++ LG +F DFKI+NI+ + + PIRLE L H F +Y
Sbjct: 161 KTVESARLGAKRIAKMVRRELGGGIQFNDFKIENIIATFNCNVPIRLERLYEEHKLFCNY 220
Query: 135 EPELFPGLIYRMKQP---KIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPE+F GL+YR+ P + VLL+FVSG +++TG + ++ Y + + P+L EF+
Sbjct: 221 EPEIFAGLVYRIAIPCKSEAVLLVFVSGNVIVTGCRSPEDIYLIYRRMAPILCEFKH 277
>gi|195438615|ref|XP_002067228.1| GK16294 [Drosophila willistoni]
gi|194163313|gb|EDW78214.1| GK16294 [Drosophila willistoni]
Length = 1222
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 116/173 (67%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 734 INNVVCSFSVRCHLKLREIALHGANVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 792
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F++F+I N++G+C + + I++ + H +SYE
Sbjct: 793 TSEIMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSERHRDNASYE 852
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M++PK L IF +G I +T A V D A ++IYP+ EFRK
Sbjct: 853 PELHPGVTYKMREPKATLKIFSTGSITVTAASVND-VEAAIQHIYPLAYEFRK 904
>gi|16741283|gb|AAH16476.1| TATA box binding protein [Mus musculus]
gi|148688515|gb|EDL20462.1| TATA box binding protein, isoform CRA_c [Mus musculus]
Length = 260
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 105/179 (58%), Gaps = 56/179 (31%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 137 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 196
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKS + P GL Y
Sbjct: 197 VCTGAKSYE--------------------------------------PELFPGLIY---- 214
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
RM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 215 --------------RMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 259
>gi|149047098|gb|EDL99818.1| TATA box binding protein, isoform CRA_b [Rattus norvegicus]
Length = 262
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 105/179 (58%), Gaps = 56/179 (31%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 139 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 198
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
VCTGAKS + P GL Y
Sbjct: 199 VCTGAKSYE--------------------------------------PELFPGLIY---- 216
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
RM +P+IVLLIFVSGK+V+TGAKVR E Y AFENIYP+L FRK
Sbjct: 217 --------------RMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT 261
>gi|392522763|gb|AFM78170.1| TATA box-binding protein, partial [uncultured diatom]
Length = 113
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 92/113 (81%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 105
+RFAAVIMR+REP+ TALIFASGKM TG KS S LAA+++A II+K+GF + DFK
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSTHNSSLAAKRFAYIIEKVGFKSTGLDFK 60
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
+QNIVG+ DV FP+RLEGL Y+H +SSYEPELFPGLIYR+ P++V LIFVS
Sbjct: 61 VQNIVGTVDVGFPVRLEGLVYAHSMYSSYEPELFPGLIYRLGIPRVVFLIFVS 113
>gi|392522725|gb|AFM78151.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TAL+FASGK+V TG KS S LA +K A I++++GF P+ + +F
Sbjct: 1 RRFAAVIMRLREPRATALVFASGKIVITGTKSSHNSGLATKKIAYILERVGFRPSSYINF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEG+A++H FSSYEPELFPGLIYR+ QP++VLLIFVS
Sbjct: 61 KVQNIVGTVDVGFPIRLEGVAFAHPTFSSYEPELFPGLIYRLGQPRVVLLIFVS 114
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 139 FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
F +I R+++P+ L+F SGKIVITG K + A + I +L
Sbjct: 3 FAAVIMRLREPRATALVFASGKIVITGTKSSHNSGLATKKIAYIL 47
>gi|326432016|gb|EGD77586.1| hypothetical protein PTSG_08683 [Salpingoeca sp. ATCC 50818]
Length = 185
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 39/173 (22%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V NIV+TVNL LDLK I L RNAEY+PKRF+AV+MRIR P+TTAL+FA+GK++CTGA
Sbjct: 51 VVNIVATVNLATHLDLKHITLSVRNAEYSPKRFSAVVMRIRSPRTTALVFATGKLICTGA 110
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KS + + + ARK+A+II+K+GF
Sbjct: 111 KSTEDAYVGARKFAKIIKKIGF-------------------------------------- 132
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
LFPGLI+RM P++V+LIFVSGK+VITGAK ++ AF+NI +L FRK
Sbjct: 133 -SLFPGLIFRMADPRVVVLIFVSGKLVITGAKSHEDIEQAFDNICILLQTFRK 184
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 68 GKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
G +V +G + A + + + + G P ++ NIV + ++ + L+ + S
Sbjct: 19 GAVVASGGNTGNAVSAAGGETSSALVQTGRP------EVVNIVATVNLATHLDLKHITLS 72
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETY 173
+ Y P+ F ++ R++ P+ L+F +GK++ TGAK ++ Y
Sbjct: 73 V-RNAEYSPKRFSAVVMRIRSPRTTALVFATGKLICTGAKSTEDAY 117
>gi|392522651|gb|AFM78114.1| TATA box-binding protein, partial [Chaetoceros affinis]
gi|392522765|gb|AFM78171.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522771|gb|AFM78174.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522773|gb|AFM78175.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522777|gb|AFM78177.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS + LA++K+A II+K+GF A DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSTHNASLASKKFALIIEKVGFKTAPEVDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ QP++V+LIFVS
Sbjct: 61 KVQNIVGTADVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|145509947|ref|XP_001440912.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408140|emb|CAK73515.1| unnamed protein product [Paramecium tetraurelia]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 115/175 (65%), Gaps = 7/175 (4%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTV+L +L+L I+ AR AEYNPKRF+AVIMR+ P TTALIF SGKMVCTGA
Sbjct: 27 IQNVVSTVDLGTELNLVVISNGARMAEYNPKRFSAVIMRLSNPSTTALIFQSGKMVCTGA 86
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
KSE QS +AARKYA+II KLGFP +Q L+ Y + YE
Sbjct: 87 KSEDQSLIAARKYAKIINKLGFPVV---TLLQASTSESQSNQTNLLKDQQYR--SVVQYE 141
Query: 136 PELFPGLIYR--MKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+FPGLI+R Q KI LLIFVSG+ VITG K ++ F+ I P+L +F+K
Sbjct: 142 PEIFPGLIFRKITDQKKITLLIFVSGRCVITGGKKTEDLNNVFKFILPILDQFKK 196
>gi|195386532|ref|XP_002051958.1| GJ17285 [Drosophila virilis]
gi|194148415|gb|EDW64113.1| GJ17285 [Drosophila virilis]
Length = 387
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IAL N EY + V MR+R P TTA I++SG++ CTGA
Sbjct: 54 INNVVCSFSVRCHLKLREIALHGSNVEYR-RENGMVTMRLRRPYTTASIWSSGRITCTGA 112
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YAR + KLGFP F++F+I N++G+C + + IR+ + H +SYE
Sbjct: 113 ISEPQAKVAARRYARSLGKLGFPVHFQNFRIVNVLGTCSMPWSIRIVKFSERHRDNASYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PEL PG+ Y+M+ PK + IF +G I +T A V + +A + +YP++ EFR
Sbjct: 173 PELHPGVTYKMRDPKATMKIFSTGSITVTAASV-NAVESAIQRLYPLVHEFR 223
>gi|392522761|gb|AFM78169.1| TATA box-binding protein, partial [uncultured diatom]
Length = 113
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 92/113 (81%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 105
+RFAAVIMR+REP+ TALIFASGKM TG KS S LAA+++A II+K+GF + DFK
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSTHNSSLAAKRFAYIIEKVGFKSTGLDFK 60
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
+QN+VG+ DV FP+RLEGL Y+H +SSYEPELFPGLIYR+ P++V LIFVS
Sbjct: 61 VQNMVGTVDVGFPVRLEGLVYAHSMYSSYEPELFPGLIYRLGIPRVVFLIFVS 113
>gi|221057235|ref|XP_002259755.1| transcription initiation factor TFiid,TATA-binding protein
[Plasmodium knowlesi strain H]
gi|193809827|emb|CAQ40531.1| transcription initiation factor TFiid,TATA-binding protein,
putative [Plasmodium knowlesi strain H]
Length = 250
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ NI+++ NL +DL+ +A+ RNAEYNP + +I+R+ +PK T LIF SG+++ TG
Sbjct: 74 IHNIIASANLSVDIDLRLVAISIRNAEYNPSKINTLIVRLNKPKCTVLIFKSGRLMLTGT 133
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
K++ + +K +II+ + P K + F I+NI+ S D PIRLE LA+ H + +Y
Sbjct: 134 KTKADAIYGCKKIGKIIKLVTNEPVKLEGFNIENIIASADCNMPIRLEMLAHDHKDYCNY 193
Query: 135 EPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPELF GL+YR K + K V+LIFVSGKI+ITG K + YT F++IY VL ++R
Sbjct: 194 EPELFAGLVYRYKPTSKLKSVILIFVSGKIIITGCKSVQKLYTVFDDIYNVLLQYR 249
>gi|428671167|gb|EKX72085.1| transcription factor TFIID or TATA-binding protein, TBP, putative
[Babesia equi]
Length = 304
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 124/178 (69%), Gaps = 5/178 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++V+L +LDL++IA+ RNAEYNPK+F A+++R+ PK T LIF +G+++ TG+
Sbjct: 127 VQNIVASVHLGRELDLREIAISTRNAEYNPKKFNALVLRMHNPKCTGLIFRTGRIIITGS 186
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
++ + ++L A++ A+II+++ G F++FKI+NI+ + + PIRLE L+ H +
Sbjct: 187 RTTEAARLGAKRMAKIIRRVLGGDDFAFRNFKIENIIATFNCNVPIRLEVLSSEHEDLCN 246
Query: 134 YEPELFPGLIYRM---KQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE F GL++R + VLLIFVSG ++ITG K +E + F ++P+L +++
Sbjct: 247 YEPEFFAGLVFRFSLTDTSEAVLLIFVSGNVIITGCKSMEEVHHVFNTMHPILLRYQE 304
>gi|392522775|gb|AFM78176.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS + LA++K+A II+++GF A DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSTHNASLASKKFALIIEEVGFETAPEVDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ QP++V+LIFVS
Sbjct: 61 KVQNIVGTADVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|392522755|gb|AFM78166.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGLAY+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLAYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|195164313|ref|XP_002022993.1| GL16412 [Drosophila persimilis]
gi|194105055|gb|EDW27098.1| GL16412 [Drosophila persimilis]
Length = 987
Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L+ IAL+ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 503 INNVVCSFSVRCHLKLRDIALRGCNVEYR-RENGMVTMKLRRPYTTASIWSSGRITCTGA 561
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F++F+I N++G+C + + I++ + H +SYE
Sbjct: 562 TSEIMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSEKHRDNASYE 621
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+MK PK L IF +G I +T A V D +A ++IYP++ EFRK
Sbjct: 622 PELHPGVTYKMKMPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEFRK 673
>gi|392522731|gb|AFM78154.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TAL+FASGK V TG KS S LA +K A I++++GF PA + +F
Sbjct: 1 RRFAAVIMRLREPRATALVFASGKTVITGTKSSHNSSLATKKIAYILERIGFQPASYINF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEG+A++H FSSYEPELFPGLIYR+ QP++ LLIFVS
Sbjct: 61 KVQNIVGTVDVGFPIRLEGVAFAHPTFSSYEPELFPGLIYRLVQPRVCLLIFVS 114
>gi|84998870|ref|XP_954156.1| transcription initiation factor (TBP ) [Theileria annulata]
gi|65305154|emb|CAI73479.1| transcription initiation factor (TBP homologue), putative
[Theileria annulata]
Length = 222
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 124/181 (68%), Gaps = 4/181 (2%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++ V+NIV++V+L +LDL++IA+ RNAEYNP++F A+++R++ PK T LIF +G+++
Sbjct: 42 SIPVVQNIVASVHLGEELDLREIAISTRNAEYNPRKFNALVLRMQNPKCTGLIFRTGRII 101
Query: 72 CTGAKSEQQSKLAARKYARIIQK-LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG+K+ + +KL ++ A++I+K G KF +FKI+NI+ + PIRLE + H
Sbjct: 102 ITGSKTIEDAKLGGKRMAKMIRKETGLDLKFNNFKIENIIATFSCNVPIRLEVFSQEHKD 161
Query: 131 FSSYEPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
+YEPE F GL+YR + + + VLLIFVSG ++ITG K E F+ +YP+L +++
Sbjct: 162 LCNYEPEFFAGLVYRCRINEESEAVLLIFVSGNVIITGCKSPQEIQYVFKIMYPILHQYQ 221
Query: 188 K 188
Sbjct: 222 N 222
>gi|198471801|ref|XP_001355729.2| GA14764 [Drosophila pseudoobscura pseudoobscura]
gi|198146086|gb|EAL32788.2| GA14764 [Drosophila pseudoobscura pseudoobscura]
Length = 1037
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L+ IAL+ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 554 INNVVCSFSVRCHLKLRDIALRGCNVEYR-RENGMVTMKLRRPYTTASIWSSGRITCTGA 612
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F++F+I N++G+C + + I++ + H +SYE
Sbjct: 613 TSEIMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSEKHRDNASYE 672
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+MK PK L IF +G I +T A V D +A ++IYP++ EFRK
Sbjct: 673 PELHPGVTYKMKMPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEFRK 724
>gi|392522767|gb|AFM78172.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAV MR+REP+ TALIFASGKM TG KS + LA++K+A II+K+GF A DF
Sbjct: 1 RRFAAVTMRLREPRATALIFASGKMCATGTKSTHNASLASKKFALIIEKVGFKTAPEVDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ QP++V+LIFVS
Sbjct: 61 KVQNIVGTADVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|392522769|gb|AFM78173.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS + LA++K+A II+K+GF A DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSTHNASLASKKFALIIEKVGFKTAPEVDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPI+LEGL Y+H F+SYEPELFPGLIYR+ QP++V+LIFVS
Sbjct: 61 KVQNIVGTADVGFPIQLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|392522747|gb|AFM78162.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHSSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVSFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|392522727|gb|AFM78152.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522729|gb|AFM78153.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TAL+FASGK+V TG KS S LA +K A I++++GF PA + +F
Sbjct: 1 RRFAAVIMRLREPRATALVFASGKLVITGTKSSHNSSLATKKIAYILERVGFQPASYINF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEG+A+ H FSSYEPELFPGLIYR+ +P++V LIFVS
Sbjct: 61 KMQNIVGTVDVGFPIRLEGVAFGHPTFSSYEPELFPGLIYRLFEPRVVFLIFVS 114
>gi|392522739|gb|AFM78158.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHSTFTSYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|332031263|gb|EGI70797.1| TATA box-binding protein-like protein 1 [Acromyrmex echinatior]
Length = 401
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 174 INNVVCSFSVRCHLNLREIALNGSNVEY-RRENGMITMKLRRPYTTASIWSSGKVTCTGA 232
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 233 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCSMPFAIKITSFSVHHKENADYE 292
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E+IYP++ EFRK
Sbjct: 293 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVA-AVQAAIEHIYPLVYEFRK 344
>gi|392522759|gb|AFM78168.1| TATA box-binding protein, partial [uncultured diatom]
Length = 113
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 91/113 (80%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 105
+RFAAVIMR+REP+ ALIFASGKM TG KS S LAA+++A II+K+GF + DFK
Sbjct: 1 RRFAAVIMRLREPRAAALIFASGKMCVTGTKSTHNSSLAAKRFAYIIEKVGFKSTGLDFK 60
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
+QN+VG+ DV FP+RLEGL Y+H +SSYEPELFPGLIYR+ P++V LIFVS
Sbjct: 61 VQNMVGTVDVGFPVRLEGLVYAHSMYSSYEPELFPGLIYRLGIPRVVFLIFVS 113
>gi|392522735|gb|AFM78156.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522757|gb|AFM78167.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|194769912|ref|XP_001967045.1| GF21727 [Drosophila ananassae]
gi|190622840|gb|EDV38364.1| GF21727 [Drosophila ananassae]
Length = 1683
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L+ IAL N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 1245 INNVVCSFSVRCHLKLRDIALNGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 1303
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F++F+I N++G+C + + I++ + H +SYE
Sbjct: 1304 TSEPMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 1363
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G I +T A V D A ++I+P++ EFRK
Sbjct: 1364 PELHPGVTYKMRDPKATLKIFSTGSITVTAASVND-VEAAIQHIFPLVFEFRK 1415
>gi|405976239|gb|EKC40752.1| TATA box-binding-like protein 1 [Crassostrea gigas]
Length = 280
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + N C L+L+ IA++ + EY ++ + V M+IR P TTA I++SGK+VCTGA
Sbjct: 51 INNVVCSFNTRCHLNLRSIAMEGSHVEYRREQ-SMVNMKIRRPYTTATIWSSGKIVCTGA 109
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE++SK+AARK+AR +Q+LG+ F +F++ N++G+C + F I++ G + H +SYE
Sbjct: 110 TSEEESKIAARKFARKLQRLGYKVTFTNFRVVNVLGTCGMPFRIKIAGFSQKHPKDASYE 169
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PEL PG+ Y++K PK L IF +G I +T V + A E+I+P+++EF+
Sbjct: 170 PELHPGVTYKIKDPKATLKIFSTGSITVTAPCVAN-VQAAIEHIFPLVSEFK 220
>gi|82596850|ref|XP_726432.1| transcription initiation factor TFIId [Plasmodium yoelii yoelii
17XNL]
gi|23481840|gb|EAA17997.1| transcription initiation factor tfiid [Plasmodium yoelii yoelii]
Length = 285
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 4/176 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ NI+S+ NLD ++DL+ +A+ ++AEYNP + +I+RI PK TALIF SG+++ TG
Sbjct: 109 IHNIISSANLDTEIDLRLVAISIKSAEYNPSKINTLIIRINNPKCTALIFKSGRIMLTGT 168
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
K++ S +K +II+ + + K+FKI+NI+ S + P+RLE LA+ H + +Y
Sbjct: 169 KNKTDSIKGCKKIGKIIKLVTNQNIRLKNFKIENIIASANCNIPVRLEMLAHDHKEYCNY 228
Query: 135 EPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPELF GL+YR K K V+LIFVSGKI+ITG K + T F++IY VL +++
Sbjct: 229 EPELFAGLVYRYKPTSNLKSVILIFVSGKIIITGCKSLQKLNTVFQDIYNVLVQYK 284
>gi|394774083|gb|AFN37232.1| TATA-box binding protein [Aphis glycines]
Length = 149
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 83/91 (91%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL C+LDLK IAL ARNAE+NPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 59 GVVPQLQNIVSTVNLGCRLDLKTIALHARNAEFNPKRFAAVIMRIREPRTTALIFSSGKM 118
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKF 101
VCTGAKSE+ S+LAARKYARIIQKL FPAKF
Sbjct: 119 VCTGAKSEEDSRLAARKYARIIQKLSFPAKF 149
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A H + + P+ F +I R+++P+ LIF SGK+V T
Sbjct: 63 QLQNIVSTVNLGCRLDLKTIAL-HARNAEFNPKRFAAVIMRIREPRTTALIFSSGKMVCT 121
Query: 165 GAKVRDETYTA 175
GAK +++ A
Sbjct: 122 GAKSEEDSRLA 132
>gi|4688680|emb|CAB41475.1| TBP-like factor [Drosophila melanogaster]
Length = 537
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 109 INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 167
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 168 TSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 227
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V + +A ++IYP++ +FRK
Sbjct: 228 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 281
>gi|123507489|ref|XP_001329427.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121912382|gb|EAY17204.1| hypothetical protein TVAG_291560 [Trichomonas vaginalis G3]
Length = 235
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ V NIV+ V+ CKLDL KI RN+EYNP RF A +R +EPK TAL F +GK+
Sbjct: 51 IPKVVNIVACVDYGCKLDLLKITSSTRNSEYNPIRFPAATLRNKEPKATALAFKNGKVNI 110
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYS--HG 129
G KS + AAR + R+ + +G K K F I N+V + D KFPI LE +A S H
Sbjct: 111 VGCKSADIALKAARCFGRLFKNIGIKDVKIKSFSIANMVATMDCKFPIHLESIASSPGHI 170
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
F++Y PE++ GLIYR+ PK L+I+VSGKI+ITGAK +E A IYP+L F
Sbjct: 171 KFATYNPEIYAGLIYRLASPKTTLMIYVSGKIIITGAKSEEELKAASAFIYPILRLFAST 230
Query: 190 Q 190
+
Sbjct: 231 E 231
>gi|442615484|ref|NP_001259329.1| TATA box binding protein-related factor 2, isoform I [Drosophila
melanogaster]
gi|440216531|gb|AGB95174.1| TATA box binding protein-related factor 2, isoform I [Drosophila
melanogaster]
Length = 1714
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 1286 INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 1344
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 1345 TSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 1404
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V + +A ++IYP++ +FRK
Sbjct: 1405 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 1458
>gi|24640580|ref|NP_511084.2| TATA box binding protein-related factor 2, isoform J [Drosophila
melanogaster]
gi|45554500|ref|NP_996377.1| TATA box binding protein-related factor 2, isoform H [Drosophila
melanogaster]
gi|17862444|gb|AAL39699.1| LD27895p [Drosophila melanogaster]
gi|22831945|gb|AAF46368.2| TATA box binding protein-related factor 2, isoform J [Drosophila
melanogaster]
gi|45446857|gb|AAF46369.3| TATA box binding protein-related factor 2, isoform H [Drosophila
melanogaster]
Length = 632
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 262
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 263 TSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 322
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V + +A ++IYP++ +FRK
Sbjct: 323 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 376
>gi|4741972|gb|AAD28784.1|AF136569_1 TATA box binding protein-related factor 2 [Drosophila melanogaster]
Length = 632
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 262
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 263 TSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 322
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V + +A ++IYP++ +FRK
Sbjct: 323 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 376
>gi|161077628|ref|NP_001096905.1| TATA box binding protein-related factor 2, isoform E [Drosophila
melanogaster]
gi|281360601|ref|NP_001162701.1| TATA box binding protein-related factor 2, isoform F [Drosophila
melanogaster]
gi|442615486|ref|NP_001259330.1| TATA box binding protein-related factor 2, isoform G [Drosophila
melanogaster]
gi|76446337|gb|ABA42953.1| TRF2 [Drosophila melanogaster]
gi|158031744|gb|ABW09355.1| TATA box binding protein-related factor 2, isoform E [Drosophila
melanogaster]
gi|272506032|gb|ACZ95236.1| TATA box binding protein-related factor 2, isoform F [Drosophila
melanogaster]
gi|440216532|gb|AGB95175.1| TATA box binding protein-related factor 2, isoform G [Drosophila
melanogaster]
Length = 1715
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L++IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 1287 INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 1345
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 1346 TSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 1405
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V + +A ++IYP++ +FRK
Sbjct: 1406 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 1459
>gi|392522753|gb|AFM78165.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDETDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHFTFASYEPELFPGLIYRLYEPKAVFLVFVS 114
>gi|392522745|gb|AFM78161.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +P +V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPMVVFLVFVS 114
>gi|322796560|gb|EFZ19034.1| hypothetical protein SINV_07503 [Solenopsis invicta]
Length = 303
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL+ N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 79 INNVVCSFSVRCHLNLREIALKGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 137
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 138 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSIHHKENADYE 197
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K PK L IF +G + +T V A E+IYP++ EFRK
Sbjct: 198 PELHPGVTYKLKDPKATLKIFSTGSVTVTAPNVA-AVQAAIEHIYPLVYEFRK 249
>gi|392522743|gb|AFM78160.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHSPTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|392522737|gb|AFM78157.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVI R+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVITRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|156094392|ref|XP_001613233.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium vivax Sal-1]
gi|148802107|gb|EDL43506.1| transcription initiation factor TFiid, TATA-binding protein,
putative [Plasmodium vivax]
Length = 250
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 118/176 (67%), Gaps = 4/176 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ NI+++ NL +DL+ +A+ RNAEYNP + +I+R+ +PK TALIF +G+++ TG
Sbjct: 74 IHNIIASANLCVDIDLRLVAISIRNAEYNPSKINTLIVRLNKPKCTALIFKNGRIMLTGT 133
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
K++ + +K +II+ + + K + F I+NI+ S D P+RLE LA+ H + +Y
Sbjct: 134 KTKADAIYGCKKIGKIIKLVTNESVKLEGFNIENIIASADCNMPVRLEMLAHDHKEYCNY 193
Query: 135 EPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPELF GL+YR K + K V+LIFVSGKI+ITG K + YT F++IY VL ++R
Sbjct: 194 EPELFAGLVYRYKPTSKLKSVILIFVSGKIIITGCKSVQKLYTVFDDIYNVLLQYR 249
>gi|389584271|dbj|GAB67004.1| transcription initiation factor TFiid TATA-binding protein, partial
[Plasmodium cynomolgi strain B]
Length = 246
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 116/172 (67%), Gaps = 4/172 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ NI+++ NL ++DL+ +A+ RNAEYNP + +I+R+ +PK T LIF SG+++ TG
Sbjct: 74 IHNIIASANLSVEIDLRLVAISIRNAEYNPSKINTLIVRLNKPKCTVLIFKSGRLMLTGT 133
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
K++ + A +K +II+ + + K + F I+NI+ S D PIRLE LA+ H + +Y
Sbjct: 134 KTKGDAIYACKKIGKIIRLVTNESVKLEGFNIENIIASADCNMPIRLEMLAHDHKDYCNY 193
Query: 135 EPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
EPELF GL+YR K + K V+LIFVSGKI+ITG K + YT F++IY VL
Sbjct: 194 EPELFAGLVYRYKPTSKLKSVILIFVSGKIIITGCKSVQKLYTVFDDIYNVL 245
>gi|427787417|gb|JAA59160.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 321
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL A N EY + + M+IR P TTA +++SGK+ CTGA
Sbjct: 84 INNVVCSFSVRCHLNLRQIALTASNVEYR-RENGMLTMKIRTPYTTASMWSSGKVTCTGA 142
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+ +KLAAR+YARI+QKLGF KF ++++ N++G+C + F I+L + S+ +SYE
Sbjct: 143 TSEETAKLAARRYARILQKLGFRVKFMNYRVVNVLGTCTMPFAIKLIPFSQSNRPIASYE 202
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K K L IF +G I +T V + +A E I+P++ E+RK
Sbjct: 203 PELHPGVTYKIKDLKATLKIFSTGSITVTAPSVAN-VQSAIEQIFPLVYEYRK 254
>gi|193875778|gb|ACF24525.1| TATA binding protein of TFIID [Gymnochlora stellata]
Length = 162
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Query: 29 LDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKY 88
LDLKK+AL+A+N+EYNPKRF A+I+R R+PK TALIF SGKMVCTG K+E ++K A+ K+
Sbjct: 1 LDLKKVALKAKNSEYNPKRFHALILRSRDPKATALIFKSGKMVCTGTKTETEAKEASLKF 60
Query: 89 ARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMK 147
++I++ GF A K++ ++N+V +CD + PI L+ + + + YEPE+FPGL++R
Sbjct: 61 LKVIKQAGFTKAMLKNYSVRNVVATCDYRSPINLDPIFFGYRDQCMYEPEIFPGLLFRPN 120
Query: 148 QPKIVLLIFVSGKIVITG 165
+ KIV++ F SGKIVITG
Sbjct: 121 KAKIVVIFFSSGKIVITG 138
>gi|301103642|ref|XP_002900907.1| TATA-box-binding protein, putative [Phytophthora infestans T30-4]
gi|262101662|gb|EEY59714.1| TATA-box-binding protein, putative [Phytophthora infestans T30-4]
Length = 163
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
Query: 28 KLDLKKIALQA-RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAAR 86
+ DL + +++ R AE PK+ ++M++ PK TA++FA+GK+VCTGA++E K AAR
Sbjct: 2 RFDLTNLLVKSHRRAELVPKK-NCILMKLHNPKATAMLFANGKLVCTGAETEDAIKNAAR 60
Query: 87 KYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYR 145
++ ++IQK+ FP DFKIQN+VG+CD+ F + +E LA++H +YEPEL+P LIYR
Sbjct: 61 RFTQVIQKMDFPGVNLIDFKIQNVVGTCDMGFRVLVEALAFAHSDRCTYEPELYPALIYR 120
Query: 146 MKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPV 182
+++P++ +L+FVSGK+V T +K E Y+A E I+PV
Sbjct: 121 LEKPQVKVLVFVSGKVVFTDSKEPRELYSACEAIFPV 157
>gi|194891201|ref|XP_001977450.1| GG18249 [Drosophila erecta]
gi|190649099|gb|EDV46377.1| GG18249 [Drosophila erecta]
Length = 641
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 115/175 (65%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L+ IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 219 INNVVCSFSVGCHLKLRDIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 277
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 278 TSEAMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 337
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V +A ++IYP++ +FRK
Sbjct: 338 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-SHVESAIQHIYPLVFDFRK 391
>gi|392522741|gb|AFM78159.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLE L Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLERLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|392522733|gb|AFM78155.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TAL+FASGK V TG KS + LA +K A I++++GF P F
Sbjct: 1 RRFAAVIMRLREPRATALVFASGKTVITGTKSSHNASLATKKIAYILERVGFQPESHIHF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QNIVG+ DV FPIRLEG+A++H FSSYEPELFPGLIYR+ QP++ LLIFVS
Sbjct: 61 KVQNIVGTVDVGFPIRLEGVAFAHPTFSSYEPELFPGLIYRLVQPRVSLLIFVS 114
>gi|380016952|ref|XP_003692431.1| PREDICTED: TATA box-binding protein-like protein 1-like [Apis
florea]
Length = 304
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 64 INNVVCSFSVRCHLNLREIALNGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 122
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 123 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADYE 182
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E IYP++ EFRK
Sbjct: 183 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVA-AVQAAIEYIYPLVYEFRK 234
>gi|328791980|ref|XP_396371.4| PREDICTED: TATA box binding protein-related factor 2 isoform 1
[Apis mellifera]
Length = 306
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 64 INNVVCSFSVRCHLNLREIALNGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 122
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 123 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADYE 182
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E IYP++ EFRK
Sbjct: 183 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVA-AVQAAIEYIYPLVYEFRK 234
>gi|392522749|gb|AFM78163.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFA VI R+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFATVITRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDGIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FPIRLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+FVS
Sbjct: 61 KVQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|241239027|ref|XP_002401459.1| TATA-box-binding protein, putative [Ixodes scapularis]
gi|215496181|gb|EEC05822.1| TATA-box-binding protein, putative [Ixodes scapularis]
Length = 316
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL A N EY + + M+IR P TTA +++SGK+ CTGA
Sbjct: 75 INNVVCSFSVRCHLNLRQIALTATNVEYR-RENGMLTMKIRAPYTTASMWSSGKVTCTGA 133
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+ +K+AAR+YARI+QKLGF KF ++++ N++G+C + F I+L + + +SYE
Sbjct: 134 TSEETAKMAARRYARILQKLGFRVKFMNYRVVNVLGTCTMPFAIKLIPFSQHNRGLASYE 193
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K K L IF +G I +T V + A E+I+P++ EFRK
Sbjct: 194 PELHPGVTYKIKDLKATLKIFSTGSITVTAPSVGN-VQQAIEHIFPLVYEFRK 245
>gi|350399828|ref|XP_003485652.1| PREDICTED: TATA box-binding protein-like protein 1-like [Bombus
impatiens]
Length = 290
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 64 INNVVCSFSVRCHLNLREIALNGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 122
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 123 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADYE 182
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E IYP++ EFRK
Sbjct: 183 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVA-AVQAAIEYIYPLVYEFRK 234
>gi|340712494|ref|XP_003394794.1| PREDICTED: TATA box-binding protein-like protein 1-like [Bombus
terrestris]
Length = 290
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 64 INNVVCSFSVRCHLNLREIALNGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 122
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 123 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADYE 182
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E IYP++ EFRK
Sbjct: 183 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVA-AVQAAIEYIYPLVYEFRK 234
>gi|307191585|gb|EFN75083.1| TATA box-binding protein-like protein 1 [Harpegnathos saltator]
Length = 297
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL+ N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 73 INNVVCSFSVRCHLNLREIALKGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 131
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 132 TSEVQAKIAARRFARSLQKLGFQVRFNNYRVVNVLGTCCMPFAIKITSFSVYHKENAEYE 191
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E IYP++ EFRK
Sbjct: 192 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVAS-VQAAIEYIYPLVYEFRK 243
>gi|383852426|ref|XP_003701729.1| PREDICTED: TATA box-binding protein-like protein 1-like [Megachile
rotundata]
Length = 295
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 69 INNVVCSFSVRCHLNLREIALNGSNVEYR-RESGMITMKLRRPYTTASIWSSGKVTCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 128 TSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSLYHKENADYE 187
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+PK L IF +G + +T V A E IYP++ EFRK
Sbjct: 188 PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVA-AVQAAIEYIYPLVYEFRK 239
>gi|348686462|gb|EGZ26277.1| hypothetical protein PHYSODRAFT_484921 [Phytophthora sojae]
Length = 161
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 112/157 (71%), Gaps = 3/157 (1%)
Query: 28 KLDLKKIALQA-RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAAR 86
+ DL + +++ R AE PK+ ++M++ PK TA++FA+GK+VCTGA++E+ K AR
Sbjct: 2 RFDLTNLLVKSHRRAELVPKK-NCILMKLHNPKATAMLFANGKLVCTGAETEEAIKNVAR 60
Query: 87 KYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYR 145
++ ++IQK+ FP DFKIQN+VG+CD+ F + +E +A++H +YEPEL+P LIYR
Sbjct: 61 RFTQVIQKMDFPGVNLIDFKIQNVVGTCDLGFRVLVEAIAFAHSDCCTYEPELYPALIYR 120
Query: 146 MKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPV 182
+ +P++ +L+FVSGK+V T +K E Y A E IYPV
Sbjct: 121 LDKPQVKVLVFVSGKVVFTDSKEPRELYAACEAIYPV 157
>gi|195480136|ref|XP_002101150.1| GE15780 [Drosophila yakuba]
gi|194188674|gb|EDX02258.1| GE15780 [Drosophila yakuba]
Length = 1872
Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 115/175 (65%), Gaps = 4/175 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L+ IALQ N E+ + V M++R P TTA I++SG++ CTGA
Sbjct: 1445 INNVVCSFSVGCHLKLRDIALQGSNVEFR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 1503
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 1504 TSEAMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 1563
Query: 136 PELFPGLIYRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+M+ PK L IF +G + +T A V +A ++IYP++ +FRK
Sbjct: 1564 PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-SHVESAIQHIYPLVFDFRK 1617
>gi|242015292|ref|XP_002428298.1| trf2 protein, putative [Pediculus humanus corporis]
gi|212512883|gb|EEB15560.1| trf2 protein, putative [Pediculus humanus corporis]
Length = 289
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+LK+IA N EY K V M++R+P TTA I++SGK+ CTGA
Sbjct: 54 INNVVCSFSVRCHLNLKEIATHGANVEYR-KENGMVTMKLRKPYTTASIWSSGKITCTGA 112
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR++AR +QKLGF +F +F++ N++G+C + F I++ + + + YE
Sbjct: 113 TSEDNAKIAARRFARSLQKLGFEVRFNNFRVVNVLGTCSMPFGIKINSFSAKYPKQAEYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+ PG+ YR+K PK L IF +G I +T V A E+IYP++ EF+K
Sbjct: 173 PEIHPGVTYRLKDPKATLKIFSTGSITVTAPCV-SSIAAAIEHIYPLVYEFKK 224
>gi|167522359|ref|XP_001745517.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775866|gb|EDQ89488.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 1/178 (0%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G +V+N+V+T K++L ++ + RN EYNP+RFAA ++R + P +T L+F+SGK+
Sbjct: 30 GITPTVENVVATGYFSGKVNLAEVQKKTRNIEYNPRRFAACVIRNKLPHSTGLLFSSGKL 89
Query: 71 VCTGAKSEQQSKLAARKYARI-IQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG 129
V G KSE+Q++ A K+ I I++ FKI N+VG DV F I L L H
Sbjct: 90 VIMGCKSEEQAEQAWSKFQDIVIKRCNIAVTPTGFKIHNVVGKVDVGFKIDLHKLHMEHS 149
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
F +Y+PE FPGL YRM+ P +VLL+F SGK+V+T AK R E I P L E R
Sbjct: 150 KFVTYDPETFPGLTYRMQDPSVVLLVFHSGKVVLTKAKTRLEMIEGLRRILPTLKENR 207
>gi|157136872|ref|XP_001663841.1| tata-box binding protein [Aedes aegypti]
gi|108869850|gb|EAT34075.1| AAEL013653-PA [Aedes aegypti]
Length = 584
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L+ IAL+ N E+ + V M++R P TTA I++SGK+ CTGA
Sbjct: 291 INNVVCSFSVRCHLNLRDIALKGFNVEFR-RENGMVTMKLRRPYTTASIWSSGKITCTGA 349
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+Y+R +QKLGF +F++F+I N++G+C + + I + + + +SYE
Sbjct: 350 TSEDQAKVAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPWGIMIVNFSEKYKKDASYE 409
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++ PK L IF +G I +T A V A E+I+P++ EFRK
Sbjct: 410 PELHPGVTYKLYNPKATLKIFSTGSITVTAASVA-FVQAAIEHIFPLVYEFRK 461
>gi|392522751|gb|AFM78164.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 46 KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF-PAKFKDF 104
+RFAAVIMR+REP+ TALIFASGKM TG KS S LA++K+A I+ K+GF P DF
Sbjct: 1 RRFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDF 60
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K+QN+VG+ DV FP RLEGL Y+H F+SYEPELFPGLIYR+ +PK+V L+ VS
Sbjct: 61 KVQNMVGTLDVGFPNRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVSVS 114
>gi|399217563|emb|CCF74450.1| unnamed protein product [Babesia microti strain RI]
Length = 283
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+NIV++V + +DL+++A+ RNAEYNPK+ A+I R+ +PK T+L+F +G+++ TG
Sbjct: 99 TVQNIVASVYIGIDIDLRQVAISTRNAEYNPKKVNALIFRLLKPKCTSLMFQTGRIMITG 158
Query: 75 AKSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AK+ + +K+ A++ +++ K+ +FK+FKI+NI+ + D P+RLE LA + F
Sbjct: 159 AKTIEDAKIGAKRIVKLLLKVLKSENIRFKNFKIENIIATADCCLPVRLESLARDYREFC 218
Query: 133 SYEPELF------PGLIYR---MKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVL 183
SYEPELF GL+YR + K VLL+FVSGKI+ITG K E + F +YP+L
Sbjct: 219 SYEPELFAGEIFDSGLVYRCPPTRNTKAVLLVFVSGKIIITGCKSMREVHRVFTYMYPIL 278
Query: 184 TEFR 187
+++
Sbjct: 279 RQYQ 282
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+QNIV S + I L +A S + Y P+ LI+R+ +PK L+F +G+I+ITG
Sbjct: 100 VQNIVASVYIGIDIDLRQVAISTRN-AEYNPKKVNALIFRLLKPKCTSLMFQTGRIMITG 158
Query: 166 AKVRDETYTAFENIYPVLTEFRKVQQ 191
AK ++ + I +L + K +
Sbjct: 159 AKTIEDAKIGAKRIVKLLLKVLKSEN 184
>gi|189237795|ref|XP_972962.2| PREDICTED: similar to tata-box binding protein [Tribolium
castaneum]
gi|270007920|gb|EFA04368.1| hypothetical protein TcasGA2_TC014666 [Tribolium castaneum]
Length = 262
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY K + M++R P TTA I++SGK+ CTGA
Sbjct: 55 INNVVCSFSVRCHLNLREIALNGINVEYR-KENGKITMKLRRPYTTASIWSSGKVTCTGA 113
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 114 TSELQAKIAARRFARCLQKLGFKVRFNNYRVVNVLGTCSMPFAIKINSFSERHKE-ADYE 172
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y+++ PK L IF +G + +T V D A E I+P++ EFRK
Sbjct: 173 PELHPGVTYKLQSPKATLKIFSTGSVTVTAPSVAD-VQAAIEYIFPLVYEFRK 224
>gi|281344600|gb|EFB20184.1| hypothetical protein PANDA_019435 [Ailuropoda melanoleuca]
Length = 89
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 82/89 (92%)
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
SE+QS+LAARKYAR++QKLGFPA+F DFKIQN+VGSCDV+F IRLEGL +H FSSYEP
Sbjct: 1 SEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFAIRLEGLVLTHQQFSSYEP 60
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
ELFPGLIYRM +P+IVLLIFVSGK+V+TG
Sbjct: 61 ELFPGLIYRMVKPRIVLLIFVSGKVVLTG 89
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + L+ + L + + Y P+ F +I R+ +P+ LIF SGK+V TG
Sbjct: 30 IQNMVGSCDVRFAIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 89
>gi|153791987|ref|NP_001093265.1| TATA box binding protein-like 1 [Takifugu rubripes]
gi|148910859|tpg|DAA06040.1| TPA_inf: TATA box binding protein-like 1 [Takifugu rubripes]
Length = 185
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V+T C L+L+ IAL+ N Y P++ V M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ISNVVATFRTRCHLNLRTIALEGNNVIYKPEQ-GTVTMKLRKPRITANIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE ++KL AR+ AR +QKLGF KF FK+ N++ C + F I L + ++YE
Sbjct: 72 SSEDEAKLGARRLARCLQKLGFKVKFSAFKVVNVMAGCSMPFKISLIDFTKKNRPIATYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL+P +Y M+QPK + +F +G + I G V D A +++YP+L+E R+
Sbjct: 132 PELYPAAMYTMRQPKATIKVFSTGSVTILGPSV-DNVAAAVQHVYPLLSECRR 183
>gi|195355070|ref|XP_002044016.1| GM21561 [Drosophila sechellia]
gi|194129269|gb|EDW51312.1| GM21561 [Drosophila sechellia]
Length = 278
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 111/167 (66%), Gaps = 4/167 (2%)
Query: 24 NLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKL 83
++ C L L+ IALQ N EY + V M++R P TTA I++SG++ CTGA SE +K+
Sbjct: 7 SVGCHLKLRDIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGATSESMAKV 65
Query: 84 AARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLI 143
AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYEPEL PG+
Sbjct: 66 AARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVT 125
Query: 144 YRMK--QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
Y+M+ PK L IF +G + +T A V + +A ++IYP++ +FRK
Sbjct: 126 YKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 171
>gi|126466212|ref|YP_001041321.1| transcription factor [Staphylothermus marinus F1]
gi|126015035|gb|ABN70413.1| TATA binding protein of transcription factor TFIID [Staphylothermus
marinus F1]
Length = 196
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 110/171 (64%), Gaps = 2/171 (1%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
L + ++NIV+TV LD LDL I + N Y P +F +I+R+ +PKTTALIF SGK
Sbjct: 11 LRPTTKIENIVATVILDQSLDLNLIESRVPNVSYQPDQFPGLILRLEKPKTTALIFKSGK 70
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSH 128
MV TGAKS QQ A +K ++++K G K +IQNIV S D+ I LE AY
Sbjct: 71 MVVTGAKSTQQLIDAVKKIIKLLRKYGIKIVSKPRIQIQNIVASGDINAYINLERAAYLL 130
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
S YEPE FPGLI+RM++P++VLLIF SGK+VITGAK E TA NI
Sbjct: 131 ED-SMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITGAKEESEVETAVRNI 180
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ +++ ++L++ A ++ Y P++F +I R+REP+ LIF+SGKMV TGA
Sbjct: 108 IQNIVASGDINAYINLERAAYLLEDSMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITGA 167
Query: 76 KSEQQSKLAARKYA 89
K E + + A R A
Sbjct: 168 KEESEVETAVRNIA 181
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KI+NIV + + + L L S SY+P+ FPGLI R+++PK LIF SGK+V+T
Sbjct: 16 KIENIVATVILDQSLDL-NLIESRVPNVSYQPDQFPGLILRLEKPKTTALIFKSGKMVVT 74
Query: 165 GAKVRDETYTAFENIYPVLTEF 186
GAK + A + I +L ++
Sbjct: 75 GAKSTQQLIDAVKKIIKLLRKY 96
>gi|357625409|gb|EHJ75865.1| tata-box binding protein [Danaus plexippus]
Length = 314
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N E+ + V M++R P TTA I++SG++ CTGA
Sbjct: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFR-RENGMVTMKLRRPYTTASIWSSGRVTCTGA 149
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+YAR +QKLGF +F++F++ N++G+C + F IR+ + + + YE
Sbjct: 150 TSEDQAKVAARRYARALQKLGFQVRFRNFRVVNVLGTCRMPFGIRIIAFSKKYKE-ADYE 208
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++ PK L IF +G + IT V D +A E I+P++ EFRK
Sbjct: 209 PELHPGVTYKLYNPKATLKIFSTGGVTITARSVSD-VQSAVERIFPLVYEFRK 260
>gi|307181017|gb|EFN68791.1| TATA box-binding protein-like protein 1 [Camponotus floridanus]
Length = 304
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + + M++R P TTA I++SGK+ CTGA
Sbjct: 78 INNVVCSFSVRCHLNLREIALNGSNVEYR-RENGMITMKLRRPYTTASIWSSGKVTCTGA 136
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR++AR +QKLGF +F ++++ N++G+C + F I++ + H + YE
Sbjct: 137 TSEIQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITLFSVHHKENADYE 196
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+ K L IF +G + +T V A E+IYP++ EFRK
Sbjct: 197 PELHPGVTYKLKELKATLKIFSTGSVTVTAPNVA-AVQAAIEHIYPLVYEFRK 248
>gi|158285534|ref|XP_308361.4| AGAP007517-PA [Anopheles gambiae str. PEST]
gi|157020038|gb|EAA04678.5| AGAP007517-PA [Anopheles gambiae str. PEST]
Length = 553
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L IA N E+ + V M++R P TTA I++SGK+ CTGA
Sbjct: 256 INNVVCSFSVRCHLNLHDIARHGHNVEFR-REHGMVTMKLRRPYTTASIWSSGKITCTGA 314
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+Y+R +QKLGF +F++F+I N++G+C + F I + + + +SYE
Sbjct: 315 TSEHQAKIAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPFGIMIVNFSEKYKKDASYE 374
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++ PK L IF +G I +T A V A E I+P++ EFRK
Sbjct: 375 PELHPGVTYKLYSPKATLKIFSTGSITVTAASVA-FVQAAIEQIFPLVYEFRK 426
>gi|124027807|ref|YP_001013127.1| transcription factor [Hyperthermus butylicus DSM 5456]
gi|123978501|gb|ABM80782.1| TATA-box binding protein [Hyperthermus butylicus DSM 5456]
Length = 202
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
+ ++NIV+TV+LD +LDL+ I EYNP++F ++ R+ EPK TALIF SGKMV T
Sbjct: 24 AKIENIVATVSLDQQLDLRLIERSILTVEYNPEQFPGLVYRLDEPKVTALIFKSGKMVVT 83
Query: 74 GAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
GAKS + A +K R ++K G P + +IQNIV S ++ + LE A + S
Sbjct: 84 GAKSTKDLIEAVKKIVRNLKKHGIPIYGRPKVQIQNIVASANLNVCVDLERAALTL-ENS 142
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
YEPE FPGLI+RM +P++VLLIF SGK+VITGAK +E Y A IY L + R ++
Sbjct: 143 MYEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVYEAVNKIYEKLKKLRAIR 200
>gi|417904|sp|P32086.1|TBP_PLAFA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|5911375|gb|AAD55768.1|AF177280_1 TATA-binding protein [Plasmodium falciparum]
gi|160700|gb|AAA29769.1| TATA-binding protein [Plasmodium falciparum]
gi|38194140|gb|AAR13208.1| TATA-binding protein [synthetic construct]
Length = 228
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 123/178 (69%), Gaps = 4/178 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ NI+S+ NL ++L+ +A+ RNAEYNP + +I+R+ +P+ TALIF +G+++ TG
Sbjct: 51 NIHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLIIRLNKPQCTALIFKNGRIMLTG 110
Query: 75 AKSEQQSKLAARKYARIIQKLG-FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
++++ S + +K A+II+ + KF +FKI+NI+ S + PIRLE LA+ H + +
Sbjct: 111 TRTKKDSIMGCKKIAKIIKIVTKDKVKFCNFKIENIIASANCNIPIRLEVLAHDHKEYCN 170
Query: 134 YEPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPELF GL+YR K K V+LIFVSGKI+ITG K ++ YT F++IY VL +++
Sbjct: 171 YEPELFAGLVYRYKPTSNLKSVILIFVSGKIIITGCKSVNKLYTVFQDIYNVLIQYKN 228
>gi|68074137|ref|XP_678983.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium berghei strain ANKA]
gi|56499609|emb|CAH98178.1| transcription initiation factor TFiid, TATA-binding protein,
putative [Plasmodium berghei]
Length = 252
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 4/176 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ NI+S+ NLD +++L+ +A+ ++AEYNP + +I+RI PK TALIF SG+++ TG
Sbjct: 76 IHNIISSANLDAEINLRLVAVSIKSAEYNPSKINTLIIRINNPKCTALIFKSGRIMLTGT 135
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS+ S +K +II+ + + K+FKI+NI+ S + P+RLE LA+ H + +Y
Sbjct: 136 KSKTDSIKGCKKIGKIIKIVTNQNIRLKNFKIENIIASANCNIPVRLEMLAHDHKEYCNY 195
Query: 135 EPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPELF GL+YR K K V+LIFVSGKI+ITG K + T F++IY VL +++
Sbjct: 196 EPELFAGLVYRYKPASNLKSVILIFVSGKIIITGCKSLQKLNTVFQDIYNVLVQYK 251
>gi|327290497|ref|XP_003229959.1| PREDICTED: TATA box-binding protein-like protein 1-like [Anolis
carolinensis]
Length = 186
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 110/174 (63%), Gaps = 2/174 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKVICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL S+ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKSNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RKV
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKT-VATAVEQIYPFVFESRKV 184
>gi|124506045|ref|XP_001351620.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium falciparum 3D7]
gi|23504547|emb|CAD51427.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium falciparum 3D7]
Length = 327
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 123/178 (69%), Gaps = 4/178 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ NI+S+ NL ++L+ +A+ RNAEYNP + +I+R+ +P+ TALIF +G+++ TG
Sbjct: 150 NIHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLIIRLNKPQCTALIFKNGRIMLTG 209
Query: 75 AKSEQQSKLAARKYARIIQKLG-FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
++++ S + +K A+II+ + KF +FKI+NI+ S + PIRLE LA+ H + +
Sbjct: 210 TRTKKDSIMGCKKIAKIIKIVTKDKVKFCNFKIENIIASANCNIPIRLEVLAHDHKEYCN 269
Query: 134 YEPELFPGLIYRMK---QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPELF GL+YR K K V+LIFVSGKI+ITG K ++ YT F++IY VL +++
Sbjct: 270 YEPELFAGLVYRYKPTSNLKSVILIFVSGKIIITGCKSVNKLYTVFQDIYNVLIQYKN 327
>gi|347963631|ref|XP_001687775.2| AGAP000336-PA [Anopheles gambiae str. PEST]
gi|333467108|gb|EDO64342.2| AGAP000336-PA [Anopheles gambiae str. PEST]
Length = 533
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I++SGK+ CTGA
Sbjct: 248 INNVVCSFSVRCHLNLRDIALYGDNVEFR-RENGMVTMKLRRPYTTASIWSSGKITCTGA 306
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+Y+R +QKLGF + ++F+I N++G+C + + I++ + + +SYE
Sbjct: 307 TSEDQAKVAARRYSRCLQKLGFNVRLRNFRIVNVLGTCAMPWGIKIVNFSEKYKKDASYE 366
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++ P+ L IF +G I +T A V A E+I+P++ EFRK
Sbjct: 367 PELHPGVTYKLHSPRATLKIFSTGSITVTAASVA-FVQAAIEHIFPLVYEFRK 418
>gi|327400113|ref|YP_004340952.1| TATA-box-binding protein [Archaeoglobus veneficus SNP6]
gi|327315621|gb|AEA46237.1| TATA-box-binding protein [Archaeoglobus veneficus SNP6]
Length = 184
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 113/171 (66%), Gaps = 2/171 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +DL KIA + ++AEY PK+F +++R +EPK ALIF SGK+VCTG+
Sbjct: 9 IENVVASTQIGENIDLNKIAKEVKDAEYKPKQFPGLVLRTKEPKAAALIFRSGKVVCTGS 68
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + + A R+ +II +LG P + + K+QNIV S D+ + L +A G +
Sbjct: 69 KSVEDANRAVRQVVKIISELGIPVILEPEVKVQNIVASADLGVDLNLNAIAIGLGLENIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
YEPE FPGL+YR+ +P++V+LIF SGK+V+TG K ++ A E I L+
Sbjct: 129 YEPEQFPGLVYRLDKPRVVVLIFGSGKMVVTGGKNPEDAVKAVERIAEELS 179
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 8 LILGAVSSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIF 65
+IL V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ LIF
Sbjct: 92 VILEPEVKVQNIVASADLGVDLNLNAIAIGLGLENIEYEPEQFPGLVYRLDKPRVVVLIF 151
Query: 66 ASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 97
SGKMV TG K+ + + A + A + LG
Sbjct: 152 GSGKMVVTGGKNPEDAVKAVERIAEELSALGL 183
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 102 KDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSG 159
KD+KI +N+V S + I L +A + Y+P+ FPGL+ R K+PK LIF SG
Sbjct: 3 KDYKIKIENVVASTQIGENIDLNKIA-KEVKDAEYKPKQFPGLVLRTKEPKAAALIFRSG 61
Query: 160 KIVITGAKVRDETYTAFENIYPVLTEF 186
K+V TG+K ++ A + +++E
Sbjct: 62 KVVCTGSKSVEDANRAVRQVVKIISEL 88
>gi|82179859|sp|Q5U385.1|TBPL1_DANRE RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor
gi|55250384|gb|AAH85661.1| TBP-like 1 [Danio rerio]
Length = 186
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V N+VS C L+L+ I L+ N Y P+ V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 VTNVVSVFRTRCHLNLRTIGLEGTNVIYKPE-VGKVLMKLRKPRITASIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++KL AR+ AR +QK+GF +F DFK+ N++ C + F IRL ++ +SYE
Sbjct: 72 TSEEEAKLGARRLARCLQKMGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P YR+K + + +F +G I +TG V+ +A E IYP+L E RK
Sbjct: 132 PELHPAASYRIKNLRSTVQVFSTGNITVTGPNVQS-VASAVEEIYPLLFECRK 183
>gi|298712244|emb|CBJ26695.1| transcription initiation factor TFIID [Ectocarpus siliculosus]
Length = 214
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+ +TVN+ +D +A + R+AEYNPK+ AV+MRIREP+ T L+F+SGK+V TGA
Sbjct: 35 LQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGA 94
Query: 76 KSEQQSKLAARKYARIIQKLGF-----PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
+ ++ AA+++ +++ +G P + + F +QN+V + +V PI LE +AY
Sbjct: 95 AGVEAAREAAQRFVAVVEGVGLNPTTNPNQLR-FAVQNMVATFEVDAPISLELMAYCQAR 153
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ YEPELFPGLIY+ +V +F SG++V+TG K D A + P+L ++R+
Sbjct: 154 WCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA-LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
+V+N+V+T +D + L+ +A QAR Y P+ F +I + A +F+SG++V T
Sbjct: 128 AVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLT 187
Query: 74 GAKSEQQ 80
G K E
Sbjct: 188 GGKQEDH 194
>gi|385805423|ref|YP_005841821.1| TATA-box-binding protein (TATA-box factor) [Fervidicoccus fontis
Kam940]
gi|383795286|gb|AFH42369.1| TATA-box-binding protein (TATA-box factor) [Fervidicoccus fontis
Kam940]
Length = 206
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 113/192 (58%), Gaps = 15/192 (7%)
Query: 5 ICYL-----ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPK 59
+CY+ I V ++NIV+TV LD +LDL +I + EYNP +F ++ R+ PK
Sbjct: 4 VCYMKKTNSISKPVVQIENIVATVTLDQQLDLHEIERKVPRVEYNPDQFPGLVFRLDRPK 63
Query: 60 TTALIFASGKMVCTGAKSEQQSKLAARK-----YARIIQKLGFPAKFKDFKIQNIVGSCD 114
TALIF SGKMV TG+KS Q+ A ++ Y I+ G P +IQNIV S +
Sbjct: 64 ITALIFKSGKMVVTGSKSTQELITAVKRIIKTFYNHGIKITGRPK----IQIQNIVASAN 119
Query: 115 VKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYT 174
+ + LE AY + YEPE FPGLI+RM P +VLLIF SGK+VITGAK +E
Sbjct: 120 LNVDVNLEDAAYKLEN-NMYEPEQFPGLIHRMTDPYVVLLIFSSGKMVITGAKREEEVSK 178
Query: 175 AFENIYPVLTEF 186
A ENIY L E
Sbjct: 179 AVENIYKTLKEL 190
>gi|347523992|ref|YP_004781562.1| TATA-box binding family protein [Pyrolobus fumarii 1A]
gi|343460874|gb|AEM39310.1| TATA-box binding family protein [Pyrolobus fumarii 1A]
Length = 207
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV LD LDL I N EYNP++F ++ R+ EPK TALIF SGKMV TGA
Sbjct: 28 IENIVATVTLDQNLDLYAIETSIPNVEYNPEQFPGLVFRLEEPKVTALIFKSGKMVVTGA 87
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS QQ A +K R +++ G + +IQNIV S ++ + LE A + S Y
Sbjct: 88 KSTQQLIEAVKKIIRELKRHGIVIVGRPKVQIQNIVASANLNVCVDLEKAALTL-ENSMY 146
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPE FPGLIYRM+ P++VLLIF SGK+VITGAK +E A NI L + R
Sbjct: 147 EPEQFPGLIYRMQNPRVVLLIFSSGKMVITGAKREEEVKEAVYNIRDTLAKMR 199
>gi|325969184|ref|YP_004245376.1| 2-alkenal reductase [Vulcanisaeta moutnovskia 768-28]
gi|323708387|gb|ADY01874.1| 2-alkenal reductase [Vulcanisaeta moutnovskia 768-28]
Length = 193
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 111/172 (64%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TVNL LDL K+A + AEYNP++F +I+R++ PK +ALIF +GKMVCTGA
Sbjct: 8 IENIVATVNLGIDLDLDKLAERLPAAEYNPEQFPGLILRLQRPKISALIFRTGKMVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KSE + K A ++ R++ + G + ++QNIV S ++ + +E A S Y
Sbjct: 68 KSENELKRAVKELVRLLNEHGADVPLTPEIQVQNIVASGNLHAEVDIEKSALML-ENSMY 126
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE FPGLIYRM PK+VLLIF SGKIV TGAK + A I+ VL +
Sbjct: 127 EPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGAKKEQQVRDAVFKIHDVLRDI 178
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ NL ++D++K AL N+ Y P++F +I R+ +PK LIF+SGK+VCTGA
Sbjct: 99 VQNIVASGNLHAEVDIEKSALMLENSMYEPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGA 158
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K EQQ + A K +++ +G
Sbjct: 159 KKEQQVRDAVFKIHDVLRDIG 179
>gi|297527104|ref|YP_003669128.1| TATA-box binding family protein [Staphylothermus hellenicus DSM
12710]
gi|297256020|gb|ADI32229.1| TATA-box binding family protein [Staphylothermus hellenicus DSM
12710]
Length = 196
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 10 LGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGK 69
L + ++NIV+TV +D LDL I + N Y P +F +I+R+ +PKTTALIF SGK
Sbjct: 11 LRPTTKIENIVATVIIDQSLDLNLIESRVPNVSYQPDQFPGLILRLEKPKTTALIFKSGK 70
Query: 70 MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSH 128
MV TGAKS QQ A +K ++++K G K +IQNIV S D+ I LE AY
Sbjct: 71 MVVTGAKSTQQLIDAVKKIIKLLRKYGIKIVSKPRIQIQNIVASGDINAYINLERAAYLL 130
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
S YEPE FPGLI+RM++P++VLLIF SGK+VITGAK E A NI
Sbjct: 131 ED-SMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITGAKEESEVEMAVRNI 180
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ +++ ++L++ A ++ Y P++F +I R+REP+ LIF+SGKMV TGA
Sbjct: 108 IQNIVASGDINAYINLERAAYLLEDSMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITGA 167
Query: 76 KSEQQSKLAARKYA 89
K E + ++A R A
Sbjct: 168 KEESEVEMAVRNIA 181
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KI+NIV + + + L L S SY+P+ FPGLI R+++PK LIF SGK+V+T
Sbjct: 16 KIENIVATVIIDQSLDL-NLIESRVPNVSYQPDQFPGLILRLEKPKTTALIFKSGKMVVT 74
Query: 165 GAKVRDETYTAFENIYPVLTEF 186
GAK + A + I +L ++
Sbjct: 75 GAKSTQQLIDAVKKIIKLLRKY 96
>gi|52345772|ref|NP_001004932.1| TATA box-binding protein-like protein 1 [Xenopus (Silurana)
tropicalis]
gi|82183480|sp|Q6DIY4.1|TBPL1_XENTR RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor
gi|49522390|gb|AAH75401.1| TBP-like 1 [Xenopus (Silurana) tropicalis]
gi|89272095|emb|CAJ81743.1| TBP-like 1 [Xenopus (Silurana) tropicalis]
Length = 186
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGLNVIYK-REVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K+ AR+ AR +QKLGF KF +FK+ N++ C + F IRL + +SYE
Sbjct: 72 TSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLAEFTKQNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRTTLQIFSTGSITVTGPDVKS-VATAIEQIYPFVFESRK 183
>gi|18313147|ref|NP_559814.1| transcription factor [Pyrobaculum aerophilum str. IM2]
gi|24638239|sp|Q8ZVR0.1|TBP_PYRAE RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|18160658|gb|AAL63996.1| transcription initiation factor TFIID (TATA-binding) [Pyrobaculum
aerophilum str. IM2]
Length = 199
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TVNL +LDL+++A + AEYNP +F +I+R+ +P+ +ALIF +GKMVCTGA
Sbjct: 10 IENIVATVNLGVELDLEQLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
K+E+ K A R ++++ G F + +IQNIV S ++ + LE A + Y
Sbjct: 70 KNEEDLKNAVRALVKLLKDHGADVPFDPEVQIQNIVASGNLHAEVDLEQ-AVLMLENAMY 128
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE FPGLIYRM P++V+LIF SGKIV TGAK + TA + +Y L E
Sbjct: 129 EPEQFPGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLYNQLKEL 180
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++DL++ L NA Y P++F +I R+ P+ LIF SGK+VCTGA
Sbjct: 101 IQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 160
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ A +K +++LG
Sbjct: 161 KSEKDVATAVQKLYNQLKELG 181
>gi|432945913|ref|XP_004083749.1| PREDICTED: TATA box-binding protein-like protein 1-like [Oryzias
latipes]
Length = 187
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V+T C L+L+ IAL+ N Y P+ V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVATFRTRCHLNLRTIALEGINVIYKPE-VGKVLMKLRKPRITASIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE ++KL AR+ AR +QKLGF +F FK+ N++ C + F I L ++ +SYE
Sbjct: 72 TSEDEAKLGARRLARCLQKLGFKVRFSAFKVVNVLAVCSMPFSIHLVDFTKNNRPIASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P YR+K K + +F +G + ITG V++ TA E +YP+L E RK
Sbjct: 132 PELHPAATYRIKNIKATVQVFSTGSLTITGPNVQN-VATAVEQVYPLLFECRK 183
>gi|119872319|ref|YP_930326.1| transcription factor [Pyrobaculum islandicum DSM 4184]
gi|166227824|sp|A1RSQ1.1|TBP_PYRIL RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|119673727|gb|ABL87983.1| TATA binding protein of transcription factor TFIID [Pyrobaculum
islandicum DSM 4184]
Length = 199
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++NIV+TVNL +LDL+K+A + AEYNP +F +I+R+ +P+ +ALIF +GKM
Sbjct: 5 GPTYRIENIVATVNLGVELDLEKLAERLAMAEYNPDQFPGLILRLTKPRISALIFRTGKM 64
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
VCTGAK+E+ K A R ++++ G F + ++QNIV S ++ + LE A
Sbjct: 65 VCTGAKNEEDLKNAVRALVKLLRDHGAEVPFDPEVQVQNIVASGNLHAEVDLEQ-AVLML 123
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM P++V+LIF SGKIV TGAK + TA + +Y L +
Sbjct: 124 ENAMYEPEQFPGLIYRMSSPRVVMLIFGSGKIVCTGAKSERDVATAVQKLYNQLKDL 180
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ NL ++DL++ L NA Y P++F +I R+ P+ LIF SGK+VCTGA
Sbjct: 101 VQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVMLIFGSGKIVCTGA 160
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ A +K ++ LG
Sbjct: 161 KSERDVATAVQKLYNQLKDLG 181
>gi|307594950|ref|YP_003901267.1| TATA-box binding family protein [Vulcanisaeta distributa DSM 14429]
gi|307550151|gb|ADN50216.1| TATA-box binding family protein [Vulcanisaeta distributa DSM 14429]
Length = 193
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TVNL LDL K+A + AEYNP++F +I+R++ PK +ALIF +GKMVCTGA
Sbjct: 8 IENIVATVNLGIDLDLDKLAERLPAAEYNPEQFPGLILRLQRPKISALIFRTGKMVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KSE + K A ++ R++ + G + ++QNIV S ++ + +E A S Y
Sbjct: 68 KSENELKRAVKELVRLLNEHGADVPLTPEIQVQNIVASGNLHAEVDIEKSALML-ENSMY 126
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE FPGLIYRM PK+VLLIF SGKIV TGAK + A I+ +L +
Sbjct: 127 EPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGAKKEQQVRDAVFKIHDILKDI 178
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ NL ++D++K AL N+ Y P++F +I R+ +PK LIF+SGK+VCTGA
Sbjct: 99 VQNIVASGNLHAEVDIEKSALMLENSMYEPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGA 158
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K EQQ + A K I++ +G
Sbjct: 159 KKEQQVRDAVFKIHDILKDIG 179
>gi|45387857|ref|NP_991285.1| TATA box-binding protein-like protein 1 [Danio rerio]
gi|33323633|gb|AAQ07595.1|AF503448_1 TBP-like factor [Danio rerio]
Length = 186
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V N+VS C L+L+ I L+ N Y P+ V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 VTNVVSVFRTRCHLNLRTIGLEGTNVIYKPE-VGKVLMKLRKPRITASIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++KL +R+ AR +QK+GF +F DFK+ N++ C + F IRL ++ +SYE
Sbjct: 72 TSEEEAKLGSRRLARCLQKMGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P YR+K + + +F +G I +TG V+ +A E IYP+L E RK
Sbjct: 132 PELHPAASYRIKNLRSTVQVFSTGNITVTGPNVQS-VASAVEEIYPLLFECRK 183
>gi|417396717|gb|JAA45392.1| Putative tata-box binding protein tbp component of tfiid and tfiiib
[Desmodus rotundus]
Length = 186
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|149722967|ref|XP_001504421.1| PREDICTED: TATA box-binding protein-like protein 1-like [Equus
caballus]
Length = 186
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGTNVK-AVATAVEQIYPFVFESRK 183
>gi|148224606|ref|NP_001083732.1| TATA box-binding protein-like protein 1 [Xenopus laevis]
gi|25091422|sp|Q9W6Z2.1|TBPL1_XENLA RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; Short=xlTLF
gi|4689078|emb|CAB41487.1| TBP-like factor [Xenopus laevis]
gi|58702024|gb|AAH90226.1| TLF protein [Xenopus laevis]
Length = 186
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGLNVIYK-REVSKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K+ AR+ AR +QKLGF KF +FK+ N++ C + F IRL + +SYE
Sbjct: 72 TSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLNEFTKQNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ +A E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPDVKS-VASAIEQIYPFVFESRK 183
>gi|47205581|emb|CAF96147.1| unnamed protein product [Tetraodon nigroviridis]
gi|47224248|emb|CAG09094.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V+T C L+L+ IAL+ N Y P++ V M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ISNVVATFRTRCHLNLRTIALEGNNVIYKPEQ-GTVTMKLRKPRITANIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE ++K+ AR+ AR +QKLGF F FK+ N++ +C + F I L + ++YE
Sbjct: 72 SSEDEAKMGARRLARCLQKLGFKVSFSAFKVVNVMATCAMPFKISLIDFTKRNRPIATYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P +Y M+ PK + +F +G + I G V D A +++YP+L+E R+
Sbjct: 132 PELHPAAMYTMRHPKATVKVFATGSVTILGPSV-DNVAAAVQHVYPLLSECRR 183
>gi|391329921|ref|XP_003739415.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Metaseiulus occidentalis]
Length = 284
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N + + V M++R P TTA I++SGK+ CTGA
Sbjct: 61 INNVVCSFSVGCHLNLRQIALTGANVVFR-RESGMVSMKLRNPYTTASIWSSGKITCTGA 119
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE SK+AAR++AR +QKLGF A+FK+FK+ N++G+C + F IRL + ++ + YE
Sbjct: 120 TSENTSKIAARRFARTLQKLGFKARFKNFKVVNVLGTCTMPFAIRLVPFSQTNKPIAQYE 179
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL PG+ Y++K+ + L IF +G I +T V + E I+P++ E RK
Sbjct: 180 PELHPGVTYKIKEIRASLKIFSTGSITVTAPSV-SAVQQSIERIFPLVYEHRK 231
>gi|355748887|gb|EHH53370.1| hypothetical protein EGM_14000, partial [Macaca fascicularis]
Length = 186
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKTNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|126459691|ref|YP_001055969.1| transcription factor [Pyrobaculum calidifontis JCM 11548]
gi|166227823|sp|A3MV36.1|TBP_PYRCJ RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|126249412|gb|ABO08503.1| TATA binding protein of transcription factor TFIID [Pyrobaculum
calidifontis JCM 11548]
Length = 199
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++NIV+TVNL +LDL+ +A + AEYNP +F +I+R+ +P+ +ALIF +GKM
Sbjct: 5 GPSYRIENIVATVNLGVELDLESLAERLPMAEYNPDQFPGLILRLTKPRISALIFRTGKM 64
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
VCTGAK+E+ K A R +++ G F + +IQNIV S ++ + LE +
Sbjct: 65 VCTGAKNEEDLKNAVRALVKLLNDHGAEVPFDPEVQIQNIVASGNLHAEVDLEQAVFML- 123
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM P++V+LIF SGKIV TGAK + TA + +Y L E
Sbjct: 124 ENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLYNQLKEL 180
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++DL++ NA Y P++F +I R+ P+ LIF SGK+VCTGA
Sbjct: 101 IQNIVASGNLHAEVDLEQAVFMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 160
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ A +K +++LG
Sbjct: 161 KSEKDVATAVQKLYNQLKELG 181
>gi|197102368|ref|NP_001126267.1| TATA box-binding protein-like protein 1 [Pongo abelii]
gi|75054881|sp|Q5R7U8.1|TBPL1_PONAB RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|55730887|emb|CAH92162.1| hypothetical protein [Pongo abelii]
Length = 190
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|12653225|gb|AAH00381.1| TBP-like 1 [Homo sapiens]
gi|167774053|gb|ABZ92461.1| TBP-like 1 [synthetic construct]
Length = 186
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAA-VIMRIREPKTTALIFASGKMVCTG 74
+ N+V C L+L+KIAL+ N Y KR A V+M++R+P+ TA I++SGK++CTG
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIY--KRDAGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
A SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SY
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|4759234|ref|NP_004856.1| TATA box-binding protein-like protein 1 [Homo sapiens]
gi|6755811|ref|NP_035733.1| TATA box-binding protein-like protein 1 [Mus musculus]
gi|115495315|ref|NP_001069758.1| TATA box-binding protein-like protein 1 [Bos taurus]
gi|150010556|ref|NP_001092762.1| TATA box-binding protein-like protein 1 [Pan troglodytes]
gi|187761295|ref|NP_001120673.1| TATA box binding protein-like 1 [Rattus norvegicus]
gi|356582420|ref|NP_001239188.1| TATA box-binding protein-like protein 1 [Canis lupus familiaris]
gi|358439409|ref|NP_001240605.1| TATA box-binding protein-like protein 1 [Homo sapiens]
gi|291397013|ref|XP_002714878.1| PREDICTED: TBP-like 1 [Oryctolagus cuniculus]
gi|301773832|ref|XP_002922334.1| PREDICTED: TATA box-binding protein-like protein 1-like [Ailuropoda
melanoleuca]
gi|311243911|ref|XP_003121240.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 1
[Sus scrofa]
gi|311243913|ref|XP_003121241.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 2
[Sus scrofa]
gi|332213363|ref|XP_003255790.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1
[Nomascus leucogenys]
gi|332213365|ref|XP_003255791.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2
[Nomascus leucogenys]
gi|390462056|ref|XP_003732780.1| PREDICTED: TATA box-binding protein-like protein 1-like [Callithrix
jacchus]
gi|397514939|ref|XP_003827726.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1 [Pan
paniscus]
gi|397514941|ref|XP_003827727.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2 [Pan
paniscus]
gi|402868220|ref|XP_003898208.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1 [Papio
anubis]
gi|402868222|ref|XP_003898209.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2 [Papio
anubis]
gi|410960078|ref|XP_003986624.1| PREDICTED: TATA box-binding protein-like protein 1 [Felis catus]
gi|426354625|ref|XP_004044755.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426354627|ref|XP_004044756.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|61248508|sp|P62340.1|TBPL1_MOUSE RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=21 kDa TBP-like
protein; AltName: Full=TATA box-binding protein-related
factor 2; Short=TBP-related factor 2; AltName:
Full=TBP-like factor; AltName: Full=TBP-related protein
gi|61248509|sp|P62380.1|TBPL1_HUMAN RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=21 kDa TBP-like
protein; AltName: Full=Second TBP of unique DNA protein;
Short=STUD; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|75076931|sp|Q4R848.1|TBPL1_MACFA RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|122143990|sp|Q32LB1.1|TBPL1_BOVIN RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|4581931|gb|AAD24800.1|AF130312_1 STUD protein [Homo sapiens]
gi|4741974|gb|AAD28785.1|AF136570_1 TATA box binding protein-related factor 2 [Homo sapiens]
gi|4218070|dbj|BAA74578.1| 21-kDa TBP-like protein [Mus musculus]
gi|4579753|dbj|BAA75218.1| TBP-like protein [Homo sapiens]
gi|17028477|gb|AAH17559.1| TBP-like 1 [Homo sapiens]
gi|26340704|dbj|BAC34014.1| unnamed protein product [Mus musculus]
gi|26347363|dbj|BAC37330.1| unnamed protein product [Mus musculus]
gi|67968732|dbj|BAE00724.1| unnamed protein product [Macaca fascicularis]
gi|81674129|gb|AAI09667.1| TBP-like 1 [Bos taurus]
gi|119568380|gb|EAW47995.1| TBP-like 1, isoform CRA_a [Homo sapiens]
gi|119568381|gb|EAW47996.1| TBP-like 1, isoform CRA_a [Homo sapiens]
gi|148672813|gb|EDL04760.1| TATA box binding protein-like 1, isoform CRA_a [Mus musculus]
gi|148672815|gb|EDL04762.1| TATA box binding protein-like 1, isoform CRA_a [Mus musculus]
gi|148910857|tpg|DAA06039.1| TPA_inf: TATA box binding protein-like 1 [Pan troglodytes]
gi|158258072|dbj|BAF85009.1| unnamed protein product [Homo sapiens]
gi|189053895|dbj|BAG36402.1| unnamed protein product [Homo sapiens]
gi|208967921|dbj|BAG73799.1| TBP-like 1 [synthetic construct]
gi|281342972|gb|EFB18556.1| hypothetical protein PANDA_011296 [Ailuropoda melanoleuca]
gi|296483997|tpg|DAA26112.1| TPA: TATA box-binding protein-like protein 1 [Bos taurus]
gi|335775744|gb|AEH58674.1| TATA box-binding protein-like protein 1-like protein [Equus
caballus]
gi|343961185|dbj|BAK62182.1| TATA box-binding protein-like protein 1 [Pan troglodytes]
gi|351696954|gb|EHA99872.1| TATA box-binding protein-like protein 1 [Heterocephalus glaber]
gi|355562045|gb|EHH18677.1| hypothetical protein EGK_15331, partial [Macaca mulatta]
gi|380785063|gb|AFE64407.1| TATA box-binding protein-like protein 1 [Macaca mulatta]
gi|383409717|gb|AFH28072.1| TATA box-binding protein-like protein 1 [Macaca mulatta]
gi|384943312|gb|AFI35261.1| TATA box-binding protein-like protein 1 [Macaca mulatta]
gi|410207162|gb|JAA00800.1| TBP-like 1 [Pan troglodytes]
gi|410252770|gb|JAA14352.1| TBP-like 1 [Pan troglodytes]
gi|410291926|gb|JAA24563.1| TBP-like 1 [Pan troglodytes]
gi|410342865|gb|JAA40379.1| TBP-like 1 [Pan troglodytes]
gi|440912697|gb|ELR62245.1| TATA box-binding protein-like protein 1 [Bos grunniens mutus]
Length = 186
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|403282108|ref|XP_003932505.1| PREDICTED: TATA box-binding protein-like protein 1 [Saimiri
boliviensis boliviensis]
Length = 186
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|328704605|ref|XP_003242546.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Acyrthosiphon pisum]
Length = 301
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S+ N+V+ +L L+L+ +AL N EY + + M++R+P TA I++SGK+ CTG
Sbjct: 62 SISNVVTNFSLKSHLNLRYLALNGHNIEYR-RENGMLTMKLRKPNATATIWSSGKIACTG 120
Query: 75 AKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
+ SE +K+A+R++ARIIQKLG+ AKF ++I N++GSC + FPI++ + + +
Sbjct: 121 STSESHAKIASRRFARIIQKLGYHNAKFSSYRIVNVLGSCSLPFPIKVIQFSEKYKTIAQ 180
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPEL PG+ +++K+ K L IF +G I +T V + Y A E IYP++ FR+
Sbjct: 181 YEPELHPGVTFKIKELKATLKIFSTGSITVTAPSVSN-VYQAIEQIYPMVFPFRR 234
>gi|126311117|ref|XP_001380665.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Monodelphis domestica]
gi|395534983|ref|XP_003769512.1| PREDICTED: TATA box-binding protein-like protein 1 [Sarcophilus
harrisii]
Length = 186
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKALRATLQIFSTGSITVTGPNVK-AVATAVEQIYPYVFESRK 183
>gi|354500033|ref|XP_003512107.1| PREDICTED: TATA box-binding protein-like protein 1-like [Cricetulus
griseus]
gi|344257078|gb|EGW13182.1| TATA box-binding protein-like protein 1 [Cricetulus griseus]
Length = 186
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E +YP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQVYPFVFESRK 183
>gi|171185805|ref|YP_001794724.1| transcription factor [Pyrobaculum neutrophilum V24Sta]
gi|226703562|sp|B1Y949.1|TBP_THENV RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|170935017|gb|ACB40278.1| 2-alkenal reductase [Pyrobaculum neutrophilum V24Sta]
Length = 197
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++NIV+TVNL +LDL+K+A + AEYNP +F +I+R+ +P+ +ALIF +GKM
Sbjct: 5 GPSYRIENIVATVNLGVELDLEKLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKM 64
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
VCTGAK+E+ K A R ++++ G F + +IQNIV S ++ + LE A
Sbjct: 65 VCTGAKNEEDLKNAVRALVKLLKDHGADVPFDPEVQIQNIVASGNLFAEVDLEQ-AVLML 123
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM P++V+LIF SGKIV TGAK + TA + +Y L +
Sbjct: 124 ENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLYNQLKDL 180
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++DL++ L NA Y P++F +I R+ P+ LIF SGK+VCTGA
Sbjct: 101 IQNIVASGNLFAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 160
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ A +K ++ LG
Sbjct: 161 KSEKDVATAVQKLYNQLKDLG 181
>gi|348523966|ref|XP_003449494.1| PREDICTED: TATA box-binding protein-like protein 2-like
[Oreochromis niloticus]
Length = 319
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 113/188 (60%), Gaps = 13/188 (6%)
Query: 1 MLPYICYLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKT 60
++P IC N++STV+L C LDLK IA + N EY P+ F +I RIREP+
Sbjct: 119 LVPVIC-----------NVISTVDLGCSLDLKFIARRMWNVEYKPQTFTGIIARIREPEA 167
Query: 61 TALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIR 120
T IF SGK++ G KS ++S+LAARK+AR +QK GFP +F +FKIQNIV C FP+
Sbjct: 168 TVTIFQSGKIISLGTKSVEESRLAARKFARKLQKFGFPVRFLNFKIQNIVAFCQT-FPVD 226
Query: 121 LEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIY 180
L L H SYEPE++ GL+ + I + +F +G I + GAK E F+ I
Sbjct: 227 LAELQKVHRGQCSYEPEMYNGLVLD-QITGIRVSLFSTGYINVFGAKTWAEVNEVFKTIC 285
Query: 181 PVLTEFRK 188
+L E+++
Sbjct: 286 RILREYKR 293
>gi|45382085|ref|NP_990086.1| TATA box-binding protein-like protein 1 [Gallus gallus]
gi|326915870|ref|XP_003204235.1| PREDICTED: TATA box-binding protein-like protein 1-like [Meleagris
gallopavo]
gi|25091426|sp|Q9YGV8.1|TBPL1_CHICK RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TBP-like factor
gi|4520318|dbj|BAA75886.1| TBP-like protein [Gallus gallus]
Length = 183
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKVICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ +A E IYP + E RK
Sbjct: 132 PELHPAVCYRIKTLRATLQIFSTGSITVTGPNVK-AVASAVEQIYPFVFESRK 183
>gi|426234833|ref|XP_004011396.1| PREDICTED: TATA box-binding protein-like protein 1 [Ovis aries]
Length = 186
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ +A E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVASAVEQIYPFVFESRK 183
>gi|355723500|gb|AES07911.1| TATA box binding protein-like protein 1 [Mustela putorius furo]
Length = 185
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 16 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 74
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 75 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 134
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E R
Sbjct: 135 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESR 185
>gi|224048129|ref|XP_002191326.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1
[Taeniopygia guttata]
gi|449497471|ref|XP_004174223.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2
[Taeniopygia guttata]
Length = 183
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKVICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ +A E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVASAVEQIYPFVFESRK 183
>gi|321468361|gb|EFX79346.1| hypothetical protein DAPPUDRAFT_304868 [Daphnia pulex]
Length = 297
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ N+V + ++ L+LK+IA N EY + V MR+R+P TTA I++SGK+ CTG
Sbjct: 71 TINNVVCSFSVKSHLNLKQIAQSGYNVEYR-RENGMVTMRLRKPYTTASIWSSGKVTCTG 129
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
A SE ++K AAR+ R + KLG+P + ++++ N++G+C + F I++ + H +S
Sbjct: 130 ATSEDEAKQAARRITRSVSKLGYPKLRLVNYRVVNVLGTCTMPFAIKITPFSAKHRDIAS 189
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPEL PG+ YR+K+PK L IF +G I +T V + +A E+IYP++ EFRK
Sbjct: 190 YEPELHPGVTYRLKEPKATLKIFSTGSITVTAPCVGN-VQSAIEHIYPLVFEFRK 243
>gi|449274009|gb|EMC83325.1| TATA box-binding protein-like protein 1 [Columba livia]
Length = 183
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKVICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ +A E IYP + E RK
Sbjct: 132 PELHPAVCYRIKTLRATLQIFSTGSITVTGPNVK-AVASAVEQIYPFVFESRK 183
>gi|345328513|ref|XP_001506923.2| PREDICTED: TATA box-binding protein-like protein 1-like isoform 1
[Ornithorhynchus anatinus]
gi|345328515|ref|XP_003431275.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 2
[Ornithorhynchus anatinus]
Length = 183
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DF++ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFRVVNVLAVCNMPFEIRLPEFTKKNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKTLRATLQIFSTGSITVTGPSVK-AVATAVEQIYPFVFESRK 183
>gi|444729025|gb|ELW69456.1| TATA box-binding protein-like protein 1 [Tupaia chinensis]
Length = 186
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ A E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVAAAVEQIYPFVFESRK 183
>gi|387018946|gb|AFJ51591.1| TATA box-binding protein-like protein 1 [Crotalus adamanteus]
Length = 183
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKVICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE ++K AR+ AR +QKLGF F DFK+ N++ C++ F +RL ++ +SYE
Sbjct: 72 TSEAEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEVRLPEFTRNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKTLRATLQIFSTGSITVTGPNVK-AVATAVEEIYPYVFESRK 183
>gi|348506447|ref|XP_003440770.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Oreochromis niloticus]
Length = 187
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V+T C L+L+ IAL+ N Y P+ V+M++R+P TA I++SGK++CTGA
Sbjct: 13 ITNVVATFRTRCHLNLRTIALEGTNVIYKPE-VGKVLMKLRKPMITASIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE ++KL AR+ AR +QKLGF +F FK+ N++ C + F + L ++ +SYE
Sbjct: 72 TSEDEAKLGARRLARCLQKLGFKVRFSAFKVVNVLAVCSMPFAVHLIDFTKNNRPIASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P YR+K K + +F +G + +TG V++ TA E +YP+L E +K
Sbjct: 132 PELHPAATYRIKNLKATIQVFSTGSLTVTGPNVQN-VATAVEQVYPLLFECQK 183
>gi|14423943|sp|Q9UWN7.1|TBP_SULAC RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|6578935|gb|AAF18138.1|AF205428_1 TATA-box binding protein [Sulfolobus acidocaldarius]
Length = 197
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +++NIV+TV LD LDL + N EY+P +F +I R+ PK T+LIF SGKMV
Sbjct: 10 AVVNIENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMV 69
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TGAKS + A ++ + ++K G K +IQNIV S ++ + L+ A+
Sbjct: 70 VTGAKSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFLLEN 129
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM +P++VLLIF SGK+VITGAK DE + A + I+ L E
Sbjct: 130 -NMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVEL 184
>gi|14423938|sp|P58177.1|TBP_PYROC RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|13752554|gb|AAK38723.1|AF367981_1 TATA-binding protein [Pyrodictium occultum]
Length = 199
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 112/178 (62%), Gaps = 2/178 (1%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++++NIV+TV+LD LDL I EYNP++F ++ R+ PK TALIF SGKMV T
Sbjct: 21 ANIENIVATVSLDQTLDLNLIERSILTVEYNPEQFPGLVYRLDSPKVTALIFKSGKMVVT 80
Query: 74 GAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
GAKS + A +K R ++K G + +IQNIV S ++ + LE A + S
Sbjct: 81 GAKSTRDLIEAVKKIVRNLKKHGIQIYGRPKVQIQNIVASANLNVCVDLERAALTL-ENS 139
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
YEPE FPGLI+RM +P++VLLIF SGK+VITGAK +E Y A IY L + R ++
Sbjct: 140 MYEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVYEAVNKIYEKLKKLRAIR 197
>gi|38492428|pdb|1MP9|A Chain A, Tbp From A Mesothermophilic Archaeon, Sulfolobus
Acidocaldarius
gi|38492429|pdb|1MP9|B Chain B, Tbp From A Mesothermophilic Archaeon, Sulfolobus
Acidocaldarius
gi|1419209|emb|CAA64405.1| box A binding protein (BAP) [Sulfolobus acidocaldarius]
Length = 198
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +++NIV+TV LD LDL + N EY+P +F +I R+ PK T+LIF SGKMV
Sbjct: 11 AVVNIENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMV 70
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TGAKS + A ++ + ++K G K +IQNIV S ++ + L+ A+
Sbjct: 71 VTGAKSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFLLEN 130
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM +P++VLLIF SGK+VITGAK DE + A + I+ L E
Sbjct: 131 -NMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVEL 185
>gi|429216623|ref|YP_007174613.1| TATA-box binding protein [Caldisphaera lagunensis DSM 15908]
gi|429133152|gb|AFZ70164.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Caldisphaera lagunensis DSM 15908]
Length = 209
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV LD LDL I + + +YNP +F ++ R++ PK TALIF SGKMV TGA
Sbjct: 31 IENIVATVILDTPLDLNLIETRIPDVDYNPDQFPGLVYRLQSPKITALIFKSGKMVVTGA 90
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS +Q A + + + G P + K +IQNIV S ++ + LE A++ S Y
Sbjct: 91 KSVKQLVWAVKTILKKLMIKGVPMQGKPQIQIQNIVASANLNVDVDLEKAAFTLPK-SMY 149
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
EPE FPGLIYRM++P++VLLIF SGK+VITGAK E A IY +L + +++
Sbjct: 150 EPEQFPGLIYRMEKPRVVLLIFSSGKMVITGAKRESEVQDAVNGIYNILKGNKSIKE 206
>gi|159147345|gb|ABW91067.1| TATA box-binding protein related factor 2 [Bos taurus]
Length = 186
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIXTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P + YR+K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 183
>gi|284161184|ref|YP_003399807.1| TATA-box binding family protein [Archaeoglobus profundus DSM 5631]
gi|284011181|gb|ADB57134.1| TATA-box binding family protein [Archaeoglobus profundus DSM 5631]
Length = 184
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 109/166 (65%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +DL KIA + +A+Y PK+F +++R +EPK ALIF SGK+VCTG+
Sbjct: 9 IENVVASTQIGENIDLNKIAREIPDADYKPKQFPGLVLRTKEPKAAALIFRSGKVVCTGS 68
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + ++ ++ +I+ LG P + + K+QNIV S D+ + L +A G +
Sbjct: 69 KSVEDARRVVKQIVKIVGSLGIPVIEEPEVKVQNIVASADLGTDLNLNAIAIGLGLENVE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR++ P++V+LIF SGK+V+TG K D+ A E I
Sbjct: 129 YEPEQFPGLVYRLRDPRVVVLIFGSGKMVVTGGKTPDDARRAVEKI 174
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+R+P+ LIF SGKMV T
Sbjct: 100 VQNIVASADLGTDLNLNAIAIGLGLENVEYEPEQFPGLVYRLRDPRVVVLIFGSGKMVVT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K+ ++ A K A ++ LG
Sbjct: 160 GGKTPDDARRAVEKIAEELESLGL 183
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 102 KDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSG 159
+DFKI +N+V S + I L +A + Y+P+ FPGL+ R K+PK LIF SG
Sbjct: 3 RDFKIKIENVVASTQIGENIDLNKIAREI-PDADYKPKQFPGLVLRTKEPKAAALIFRSG 61
Query: 160 KIVITGAK 167
K+V TG+K
Sbjct: 62 KVVCTGSK 69
>gi|294939320|ref|XP_002782411.1| TATA-box factor binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894017|gb|EER14206.1| TATA-box factor binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 255
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREP-KTTALIFASGKMVCTG 74
+ N++++ L +D K IA RN EYNP++ ++R P K T I+ +GK++ G
Sbjct: 80 LDNVIASFELGIDIDPKTIAFNLRNCEYNPRKHNCAVIRFTSPTKATCHIYRNGKVMING 139
Query: 75 AKSEQQSKLAARKYARIIQKLGF-PA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
A + + +K +K ++++++ P+ KF +FK++N++ S DV+FPIRLE LAY H A++
Sbjct: 140 AYTIELAKKIGKKIVKLVRRITHNPSIKFINFKVENMIASVDVRFPIRLERLAYDHSAYA 199
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+YEPEL GL +R+ PK+V++I+VSGKI G K D+ AF +IYP+LT+++
Sbjct: 200 TYEPELSSGLYFRLFDPKLVIMIYVSGKISFIGGKTLDDISKAFCSIYPLLTQYKD 255
>gi|145591042|ref|YP_001153044.1| transcription factor [Pyrobaculum arsenaticum DSM 13514]
gi|379004488|ref|YP_005260160.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Pyrobaculum oguniense TE7]
gi|145282810|gb|ABP50392.1| TATA binding protein of transcription factor TFIID [Pyrobaculum
arsenaticum DSM 13514]
gi|375159941|gb|AFA39553.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Pyrobaculum oguniense TE7]
Length = 201
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++NIV+TVNL +LDL+ +A + AEYNP +F +I+R+ +P+ +ALIF +GKM
Sbjct: 5 GPTYRIENIVATVNLQVELDLEMLAERLAMAEYNPDQFPGLILRLTKPRISALIFRTGKM 64
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
V TGAK+E+ K A R ++++ G F + ++QNIV S ++ + LE A
Sbjct: 65 VATGAKNEEDLKNAVRALVKLLKDHGADVPFDPEVQVQNIVASGNLHAEVDLEQ-AVLML 123
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM P++V+LIF SGKIV TGAK + TA + +Y L E
Sbjct: 124 ENAMYEPEQFPGLIYRMTNPRVVILIFGSGKIVCTGAKSERDVATAVQKLYNQLKEL 180
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ NL ++DL++ L NA Y P++F +I R+ P+ LIF SGK+VCTGA
Sbjct: 101 VQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMTNPRVVILIFGSGKIVCTGA 160
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ A +K +++LG
Sbjct: 161 KSERDVATAVQKLYNQLKELG 181
>gi|156541942|ref|XP_001600485.1| PREDICTED: TATA box-binding protein-like protein 1 [Nasonia
vitripennis]
Length = 283
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L++IAL N EY + V MR+R+P T A I +SGK+ CTGA
Sbjct: 63 ISNVVCSFSVRCHLNLREIALNGSNVEYR-RENGLVRMRLRKPCTLASISSSGKVTCTGA 121
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AAR+ AR +QKLGF +F +++I N++G+C + + I++ + + YE
Sbjct: 122 TSEEEAKKAARRCARSLQKLGFRVRFNNYRIVNVLGTCTMPWAIKITSFSTHYKDIVQYE 181
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+ PG+IY++K K L IF +G I +T + + A E+IYP++ EFRK
Sbjct: 182 PEIQPGVIYKLKNMKATLRIFSTGSITVTAPSI-NAVQAAIEHIYPLVYEFRK 233
>gi|288931352|ref|YP_003435412.1| TATA-box binding family protein [Ferroglobus placidus DSM 10642]
gi|288893600|gb|ADC65137.1| TATA-box binding family protein [Ferroglobus placidus DSM 10642]
Length = 183
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 109/166 (65%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +DL KIA + ++AEY PK+F +++R ++PK AL+F SGK+VCTG+
Sbjct: 8 IENVVASTQIGENIDLNKIAREIKDAEYKPKQFPGLVLRTKDPKAAALVFRSGKVVCTGS 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + ++ A ++ II+ LG D ++QNIV S D+ + L +A G +
Sbjct: 68 KSVEDARRAVKQVVNIIKSLGIEVYDDPDVRVQNIVASADLGVDLNLNAIAVGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR++ P++V+LIF SGK+VITG K ++ A E I
Sbjct: 128 YEPEQFPGLVYRLRDPRVVVLIFGSGKMVITGGKKPEDAKRAVEKI 173
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+R+P+ LIF SGKMV T
Sbjct: 99 VQNIVASADLGVDLNLNAIAVGLGLENIEYEPEQFPGLVYRLRDPRVVVLIFGSGKMVIT 158
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + +K A K + +Q LG
Sbjct: 159 GGKKPEDAKRAVEKISEELQALGL 182
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 101 FKDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
KD+KI +N+V S + I L +A + Y+P+ FPGL+ R K PK L+F S
Sbjct: 1 MKDYKIKIENVVASTQIGENIDLNKIAREI-KDAEYKPKQFPGLVLRTKDPKAAALVFRS 59
Query: 159 GKIVITGAKVRDETYTAFENIYPVL 183
GK+V TG+K ++ A + + ++
Sbjct: 60 GKVVCTGSKSVEDARRAVKQVVNII 84
>gi|148672814|gb|EDL04761.1| TATA box binding protein-like 1, isoform CRA_b [Mus musculus]
Length = 206
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 27 CKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAAR 86
C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA SE+++K AR
Sbjct: 44 CHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGAR 102
Query: 87 KYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRM 146
+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYEPEL P + YR+
Sbjct: 103 RLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRI 162
Query: 147 KQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
K + L IF +G I +TG V+ TA E IYP + E RK
Sbjct: 163 KSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRK 203
>gi|410916461|ref|XP_003971705.1| PREDICTED: TATA box-binding protein-like protein 1-like [Takifugu
rubripes]
Length = 185
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 2/171 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V+T C+L+L I + +N YN +R V M++R+P+ TA I+ASGK++C GA S
Sbjct: 15 NVVATFRTGCRLNLHTIGSKGKNVIYNTRR-GKVTMQLRKPRITASIWASGKVICIGASS 73
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE 137
E ++KL AR+ AR +QKLGF KF FK+ N++ C + F I L + ++YEPE
Sbjct: 74 EDEAKLGARRIARCLQKLGFKVKFSAFKVVNVMAGCSMPFKISLIDFTKKNRPIATYEPE 133
Query: 138 LFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
L+P +Y M+QPK + +F +G + I V + A +++YP+L+E R+
Sbjct: 134 LYPAAMYTMRQPKATIKVFSTGSVTILAPSVVN-VAAAVQHVYPLLSECRR 183
>gi|161899533|ref|XP_001712992.1| TATA binding protein of transcription factor IID [Bigelowiella
natans]
gi|75756487|gb|ABA27380.1| TATA binding protein of transcription factor IID [Bigelowiella
natans]
Length = 204
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Query: 10 LGAVS-SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
LG ++ + N+V +V LD LDLKKIAL+++N E+N KRF +IMR R+PK TA++F SG
Sbjct: 13 LGDIAYKIHNVVLSVRLDSILDLKKIALRSKNTEFNSKRFHGLIMRSRDPKATAIVFKSG 72
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
M+CTGAKSE+ K A K+ +II+ GF K ++++I NI + D K PI L + +
Sbjct: 73 SMICTGAKSEKDGKEAILKFVKIIRNAGFTDLKMQNYRITNIFATMDYKVPINLMQIHIA 132
Query: 128 HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
+ +EPE+ GL+Y K+++ I+ SGKI ITGAK
Sbjct: 133 FPRITKHEPEVHRGLLYYPFDTKLLVTIYASGKITITGAK 172
>gi|156937779|ref|YP_001435575.1| TATA binding protein of transcription factor TFIID [Ignicoccus
hospitalis KIN4/I]
gi|156566763|gb|ABU82168.1| TATA binding protein of transcription factor TFIID [Ignicoccus
hospitalis KIN4/I]
Length = 207
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV+TV++D +DL+KI + N EY+P +F +I R+ EP+ TALIF SGKMV TG
Sbjct: 13 IENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLIFRLEEPRVTALIFKSGKMVVTG 72
Query: 75 AKSEQQSKLAARKYARIIQKLGF-PAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AKS Q+ A +K I++ G K + +IQNIV S ++ + LE AY S
Sbjct: 73 AKSTQELITAVKKIFYILKSKGIVSGKVRPRIQIQNIVASANLGVEVHLEKAAYLL-ENS 131
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLIYR+ +P++VLL+F SGK+V+TGAK +E A E ++ L E
Sbjct: 132 MYEPEQFPGLIYRLDEPRVVLLLFSSGKMVVTGAKKEEEVSKAVEKVFQNLKE 184
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
KI+NIV + + I LE + + Y+P+ FPGLI+R+++P++ LIF SGK+V+
Sbjct: 11 IKIENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLIFRLEEPRVTALIFKSGKMVV 70
Query: 164 TGAKVRDETYTAFENIYPVL 183
TGAK E TA + I+ +L
Sbjct: 71 TGAKSTQELITAVKKIFYIL 90
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++ L+K A N+ Y P++F +I R+ EP+ L+F+SGKMV TGA
Sbjct: 106 IQNIVASANLGVEVHLEKAAYLLENSMYEPEQFPGLIYRLDEPRVVLLLFSSGKMVVTGA 165
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K E++ A K + +++ G
Sbjct: 166 KKEEEVSKAVEKVFQNLKEKG 186
>gi|159041771|ref|YP_001541023.1| transcription factor [Caldivirga maquilingensis IC-167]
gi|157920606|gb|ABW02033.1| 2-alkenal reductase [Caldivirga maquilingensis IC-167]
Length = 194
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++NIV+TVNL LDL+++A AEYNP +F +I+R + PK +ALIF +GKMVC
Sbjct: 6 VYRIENIVATVNLGVDLDLERLAEVLPAAEYNPDQFPGLILRFQRPKISALIFRTGKMVC 65
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKSE + K A + + + + G + D ++QNIV S ++ + +E A
Sbjct: 66 TGAKSEDELKRAVKYLVKTLNQRGAQIQNDSDIQVQNIVASGNLHAEVNIEKAALLL-EN 124
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
S YEPE FPGLIYRM PK+V+L+F SGKIV TGAK + A +Y L E
Sbjct: 125 SMYEPEQFPGLIYRMSDPKVVILVFSSGKIVCTGAKKEADVAVAVRKLYDKLKEI 179
>gi|24638240|sp|Q971V3.2|TBP_SULTO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
Length = 198
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 114/186 (61%), Gaps = 5/186 (2%)
Query: 2 LPYICYLILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTT 61
+P I Y AV +++NIV+TV LD LDL + N EY+P +F +I R+ PK T
Sbjct: 4 IPEIPY---KAVVNIENIVATVTLDQNLDLYAMERSVPNVEYDPDQFPGLIFRLEAPKVT 60
Query: 62 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIR 120
+LIF SGKMV TGAKS + A ++ + +++ G K +IQNIV S ++ +
Sbjct: 61 SLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKRYGMNLTGKPKIQIQNIVASANLHVIVN 120
Query: 121 LEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIY 180
L+ A+ + YEPE FPGLIYRM+ P++VLLIF SGK+VITGAK +E + A + I+
Sbjct: 121 LDKAAFLLEN-NMYEPEQFPGLIYRMEDPRVVLLIFSSGKMVITGAKREEEVHKAVKKIF 179
Query: 181 PVLTEF 186
L E
Sbjct: 180 DKLVEL 185
>gi|315427150|dbj|BAJ48765.1| transcription initiation factor TFIID TATA-box-binding protein
[Candidatus Caldiarchaeum subterraneum]
gi|315427168|dbj|BAJ48782.1| transcription initiation factor TFIID TATA-box-binding protein
[Candidatus Caldiarchaeum subterraneum]
gi|343485784|dbj|BAJ51438.1| transcription initiation factor TFIID TATA-box-binding protein
[Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+VS+V L KLDL +I + EY P +F ++ R+ +PKT LIF+SGKMVCTG
Sbjct: 10 EIQNVVSSVTLFQKLDLAQIQRTFPDVEYKPAQFPGLVFRLAKPKTATLIFSSGKMVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
AKSE++S A R + ++K GF + + +IQNIV S D+ I LE A +
Sbjct: 70 AKSEEESIRAVRTVVKALKKEGFVIREEPQIEIQNIVASIDLHGRIDLERAATTLENV-M 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLIYRM PK+V+L+F SGK+V TGAK + Y A + +L E
Sbjct: 129 YEPEQFPGLIYRMNSPKVVILMFASGKLVCTGAKYEKDVYDAVNKLQQLLEE 180
>gi|352681411|ref|YP_004891935.1| Box A binding protein [Thermoproteus tenax Kra 1]
gi|269990956|emb|CAP46909.1| TATA-box binding protein [Thermoproteus tenax Kra 1]
gi|350274210|emb|CCC80855.1| TATA-box binding protein (Box A binding protein) (TBP)
[Thermoproteus tenax Kra 1]
Length = 203
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++NIV+TVNL +LDL+++A + AEYNP +F +I+R+ P+ +ALIF +GKM
Sbjct: 8 GPTHKIENIVATVNLGVELDLEQLAERLPVAEYNPDQFPGLILRLTRPRISALIFRTGKM 67
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
VCTGAK+E K A +++ G + ++QNIV S + + LE A
Sbjct: 68 VCTGAKNETDLKNAVHALVKLLNDNGADVPLNPEVQVQNIVASGSLNAEVDLEQAALLLD 127
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM +P++V+LIF SGKIV TGAK + A + +Y L E
Sbjct: 128 N-AMYEPEQFPGLIYRMTEPRVVVLIFGSGKIVCTGAKSEKDVAVAVQRLYDRLKEL 183
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 57/81 (70%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ +L+ ++DL++ AL NA Y P++F +I R+ EP+ LIF SGK+VCTGA
Sbjct: 104 VQNIVASGSLNAEVDLEQAALLLDNAMYEPEQFPGLIYRMTEPRVVVLIFGSGKIVCTGA 163
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ +A ++ +++LG
Sbjct: 164 KSEKDVAVAVQRLYDRLKELG 184
>gi|260797205|ref|XP_002593594.1| hypothetical protein BRAFLDRAFT_284100 [Branchiostoma floridae]
gi|229278820|gb|EEN49605.1| hypothetical protein BRAFLDRAFT_284100 [Branchiostoma floridae]
Length = 205
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+ N+V + C L+L+ IAL N Y + V M++R P TA I++SGK+VCTG
Sbjct: 35 DIANVVCSFRARCHLNLRMIALNGANVIYK-RELGKVTMKLRRPYCTANIWSSGKIVCTG 93
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
A+SE +K AR+ AR +Q +GF F +FK+ N++G C + F I++ + H +SY
Sbjct: 94 ARSEDDAKKGARRCARTLQNMGFQVHFSEFKVVNVLGICAMPFTIKITLFSKHHKENASY 153
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPEL PG+ Y+++ PK V+ IF +G I T V + A E+IYP++ EFR
Sbjct: 154 EPELHPGVTYKIRDPKAVMKIFSTGSITCTAPCVAN-IQRAIEHIYPLVHEFR 205
>gi|158288977|ref|XP_310781.4| AGAP000335-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I++SGK+ CTGA
Sbjct: 59 INNVVCSFSVRCHLNLRDIALYGDNVEFR-RENGMVTMKLRRPYTTASIWSSGKITCTGA 117
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE Q+K+AAR+Y+R +QKLGF + ++F+I N++G+C + + I++ + + +SYE
Sbjct: 118 TSEDQAKVAARRYSRCLQKLGFNVRLRNFRIVNVLGTCAMPWGIKIVNFSEKYKKDASYE 177
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVR 169
PEL PG+ Y++ P+ L IF +G I +TG VR
Sbjct: 178 PELHPGVTYKLHSPRATLKIFSTGSITVTGKCVR 211
>gi|167042577|gb|ABZ07300.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_ANIW133I6]
Length = 186
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 116/180 (64%), Gaps = 4/180 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++N+V++ ++D ++DL +I + + EY+P +F ++ RI+ PKT LIF+SGKMVC
Sbjct: 7 IVSIENVVASASVDQRMDLNEITRKFADVEYHPDQFPGLVFRIKSPKTATLIFSSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TGAKSE S+ A + + ++K G K KD IQNIV S ++ I LE A +
Sbjct: 67 TGAKSETMSRKAVKLVVQQLRKGGIKIK-KDAVVTIQNIVASINLGGRIHLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E + +Q
Sbjct: 125 RSMYEPEQFPGLIHRMVDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLEEKKLMQ 184
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +++NIV+++NL ++ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 AVVTIQNIVASINLGGRIHLEQAARTLPRSMYEPEQFPGLIHRMVDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|302347997|ref|YP_003815635.1| TATA-box-binding protein [Acidilobus saccharovorans 345-15]
gi|302328409|gb|ADL18604.1| TATA-box-binding protein [Acidilobus saccharovorans 345-15]
Length = 207
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 2/174 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V +++NIV+TV L+ LDL I + + +YNP +F ++ R++ PK TAL+F SGKMV
Sbjct: 30 VVNIENIVATVILENTLDLNLIEARIPDVDYNPDQFPGLVYRLQSPKITALVFKSGKMVV 89
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKS +Q A + + G + + +IQNIV S ++ + LE A+
Sbjct: 90 TGAKSVKQLVWAVKAILKKFITKGIVIQGRPQIQIQNIVASANLNVVVDLEKAAFVL-PH 148
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM +P++VLLIF SGK+VITGAK +E Y A NIY +L E
Sbjct: 149 SMYEPEQFPGLIFRMDKPRVVLLIFSSGKMVITGAKRENEVYEAVNNIYKILDE 202
>gi|327311063|ref|YP_004337960.1| TATA-box-binding protein [Thermoproteus uzoniensis 768-20]
gi|326947542|gb|AEA12648.1| TATA-box-binding protein [Thermoproteus uzoniensis 768-20]
Length = 207
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G ++NIV+TVNL +LDL+++A + AEYNP +F +I+R+ +P+ +ALIF +GKM
Sbjct: 8 GPTHKIENIVATVNLGVELDLEQLAEKLPVAEYNPDQFPGLILRLTKPRISALIFRTGKM 67
Query: 71 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
VCTGAK+E K A +++ G + ++QNIV S + + LE A
Sbjct: 68 VCTGAKNENDLKNAVHALVKLLNDHGANVPLNPEVQVQNIVASGSLNAEVDLEQAALLL- 126
Query: 130 AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLIYRM P++V+LIF SGKIV TGAK + A + +Y L E
Sbjct: 127 ENAMYEPEQFPGLIYRMTDPRVVVLIFGSGKIVCTGAKSEKDVAVAVQQLYDKLREI 183
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ +L+ ++DL++ AL NA Y P++F +I R+ +P+ LIF SGK+VCTGA
Sbjct: 104 VQNIVASGSLNAEVDLEQAALLLENAMYEPEQFPGLIYRMTDPRVVVLIFGSGKIVCTGA 163
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ +A ++ ++++G
Sbjct: 164 KSEKDVAVAVQQLYDKLREIG 184
>gi|413933537|gb|AFW68088.1| TATA-binding protein2 isoform 1 [Zea mays]
gi|413933538|gb|AFW68089.1| TATA-binding protein2 isoform 2 [Zea mays]
Length = 78
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/71 (97%), Positives = 70/71 (98%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+NIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK
Sbjct: 7 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 66
Query: 77 SEQQSKLAARK 87
SEQQSKLAARK
Sbjct: 67 SEQQSKLAARK 77
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
F +NIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V
Sbjct: 4 FHDRNIVSTVNLDCKLDLKAIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 62
Query: 164 TGAKVRDETYTA 175
TGAK ++ A
Sbjct: 63 TGAKSEQQSKLA 74
>gi|116202165|ref|XP_001226894.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177485|gb|EAQ84953.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 84
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/82 (82%), Positives = 73/82 (89%)
Query: 108 NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
NIVGSCD+KFPIRLEGLA H FSSYEPELFPGLIYRM +PKIVLLIFVSGKIV+TGAK
Sbjct: 3 NIVGSCDIKFPIRLEGLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAK 62
Query: 168 VRDETYTAFENIYPVLTEFRKV 189
VR+E Y AFE IYPVL +FRKV
Sbjct: 63 VREEIYQAFEMIYPVLQDFRKV 84
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
NIV + ++ + L+ +A + N + Y P+ F +I R+ +PK LIF SGK+V TGAK
Sbjct: 3 NIVGSCDIKFPIRLEGLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAK 62
Query: 77 SEQQ 80
++
Sbjct: 63 VREE 66
>gi|47224247|emb|CAG09093.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ N+V+T C L+L IA N + P+R V M++R+P+ TA I++SGK++CTG
Sbjct: 12 TISNVVATFRTGCHLNLYAIACNGHNVIHRPER-GTVTMQLRKPRVTANIWSSGKVICTG 70
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
A SEQ++K+ AR+ AR +QKL FP F FK+ N++ + + F I L + + Y
Sbjct: 71 ATSEQEAKMGARRIARCVQKLNFPVSFSAFKVVNVMVTSAMPFKISLIDFTKRNRPVTRY 130
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPEL P +Y M+ PK + +F +G + I G V + T A +NIYP+L+ R+
Sbjct: 131 EPELHPAAMYTMRHPKATVRVFATGSVTIFGPSVANVT-VAIQNIYPLLSACRR 183
>gi|329764826|ref|ZP_08256418.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|340344477|ref|ZP_08667609.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|393796672|ref|ZP_10380036.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138693|gb|EGG42937.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|339519618|gb|EGP93341.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 113/175 (64%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL +I + EY+P +F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSVENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG+KSE+ ++ A + + ++K G K KD +IQNIV S ++ I LE A +
Sbjct: 67 TGSKSEEMARKAVKTVVQKLRKGGIKVK-KDATVEIQNIVASINLGGKIHLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALLEE 179
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
A ++NIV+++NL K+ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 ATVEIQNIVASINLGGKIHLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|161528106|ref|YP_001581932.1| 2-alkenal reductase [Nitrosopumilus maritimus SCM1]
gi|407462144|ref|YP_006773461.1| 2-alkenal reductase [Candidatus Nitrosopumilus koreensis AR1]
gi|160339407|gb|ABX12494.1| 2-alkenal reductase [Nitrosopumilus maritimus SCM1]
gi|407045766|gb|AFS80519.1| 2-alkenal reductase [Candidatus Nitrosopumilus koreensis AR1]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 113/175 (64%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL +I + EY+P +F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSVENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG+KSE+ ++ A + + ++K G K KD +IQNIV S ++ I LE A +
Sbjct: 67 TGSKSEEMARKAVKTVVQKLRKGGIKVK-KDAVVEIQNIVASINLGGKIHLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALLEE 179
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV ++NIV+++NL K+ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 AVVEIQNIVASINLGGKIHLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|167042151|gb|ABZ06885.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_ANIW93E5]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 113/175 (64%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++N+V++ ++D ++DL +I + + EY+P +F ++ RI+ PKT LIF+SGKMVC
Sbjct: 7 IVSIENVVASASVDQRMDLNEITRKFADVEYHPDQFPGLVFRIKSPKTATLIFSSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TGAKSE S+ A + + ++K G K KD IQNIV S ++ I LE A +
Sbjct: 67 TGAKSETMSRKAVKLVVQQLRKGGIKIK-KDAVVTIQNIVASINLGGRIHLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMVDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLEE 179
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +++NIV+++NL ++ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 AVVTIQNIVASINLGGRIHLEQAARTLPRSMYEPEQFPGLIHRMVDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|317575757|ref|NP_001188053.1| TATA box-binding protein-like protein 1 [Ictalurus punctatus]
gi|308324695|gb|ADO29482.1| tata box-binding protein-like protein 1 [Ictalurus punctatus]
Length = 186
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+VS C L+L+ I L+ N Y P+ V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVSVFRTRCHLNLRTIGLEGNNVIYRPE-VGKVLMKLRKPRITASIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE ++K+ AR+ AR +QK+GF +F DFK+ N++ C + F IRL ++ +SYE
Sbjct: 72 TSEDEAKVGARRLARCLQKIGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EL P YR+K + + +F +G + +TG V+ +A E IYP+L E +K
Sbjct: 132 LELHPAASYRIKTLRATVQVFSTGSVTVTGPNVQS-VASAVEQIYPLLFECQK 183
>gi|118431620|ref|NP_148219.2| transcription factor [Aeropyrum pernix K1]
gi|152031704|sp|Q9YAT1.3|TBP_AERPE RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|116062944|dbj|BAA80867.2| TATA-box binding protein [Aeropyrum pernix K1]
Length = 203
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV L+ +LDL I + ++ +YNP +F ++ R+ P+ T LIF SGKMV TGA
Sbjct: 25 IENIVATVILENQLDLNLIETKIQDVDYNPDQFPGLVYRLESPRVTVLIFKSGKMVITGA 84
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS Q +K + G P K +IQNIV S ++K I LE A S Y
Sbjct: 85 KSINQLIHVVKKLLKAFADQGIPISGKPQIQIQNIVASANLKVYIDLEKAALEF-ENSLY 143
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
EPE FPGLIYRM +P++V+LIF SGK+VITGAK+ +E Y A + + L E
Sbjct: 144 EPEQFPGLIYRMDEPRVVMLIFSSGKMVITGAKMENEVYDAVKKVARKLKE 194
>gi|443686931|gb|ELT90049.1| hypothetical protein CAPTEDRAFT_75203, partial [Capitella teleta]
Length = 196
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + + C L+LK+IA + + Y P+ V M++R+P TTA I++SG + TG+
Sbjct: 26 INNVVCSFSTRCHLNLKRIAREGNHVIYKPEN-GMVSMKLRKPYTTANIWSSGSITATGS 84
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+Y RI+QK+GF +F +++ N++G+C + F IR+ A H SYE
Sbjct: 85 TSEVDAKIAARRYCRILQKMGFRVRFGRYRVVNVLGTCSLPFGIRISQFAQDHHKQCSYE 144
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PEL PG Y M +P+ L +F +G I +T +V + A +I+P++ ++R
Sbjct: 145 PELHPGATYTMMEPRATLKLFTTGSITVTAPRV-ENVKLAINHIWPLVFKYR 195
>gi|118576418|ref|YP_876161.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
gi|118194939|gb|ABK77857.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
Length = 186
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 111/172 (64%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
SV+N+V++ ++D K+DL +I + EY+P +F ++ R++ PKT LIF SGKMVCTG
Sbjct: 9 SVENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
+KSE+ ++ A + + ++K G K + +IQNIV S ++ I LE A + S
Sbjct: 69 SKSEEMARKAVKTVVQKLRKGGIKVKKEAVVEIQNIVASINLGGKIHLEQAARTL-PRSM 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALLEE 179
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV ++NIV+++NL K+ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 AVVEIQNIVASINLGGKIHLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|305663395|ref|YP_003859683.1| TATA binding protein of transcription factor TFIID [Ignisphaera
aggregans DSM 17230]
gi|304377964|gb|ADM27803.1| TATA binding protein of transcription factor TFIID [Ignisphaera
aggregans DSM 17230]
Length = 218
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV++D +DL + N EY+P +F ++ R+ PK TALIF SG+MV TGA
Sbjct: 12 IENIVATVSVDQTIDLDYLDKVLPNVEYDPDQFPGLVFRLESPKVTALIFRSGRMVVTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS A ++ R + K P K +IQNIV S ++ I LE +A+ + Y
Sbjct: 72 KSTADLIKAVKRIVRTLLKYDIPITSKPRIQIQNIVASANLGSEIMLEKVAFLLEN-TMY 130
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE FPGLIYRM P +VLL+F SGK+VITGAK +E + A N+Y L E
Sbjct: 131 EPEQFPGLIYRMTDPHVVLLVFSSGKMVITGAKSEEEVFQAVRNLYLKLKEL 182
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++ L+K+A N Y P++F +I R+ +P L+F+SGKMV TGA
Sbjct: 103 IQNIVASANLGSEIMLEKVAFLLENTMYEPEQFPGLIYRMTDPHVVLLVFSSGKMVITGA 162
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE++ A R +++LG
Sbjct: 163 KSEEEVFQAVRNLYLKLKELG 183
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
KI+NIV + V I L+ L Y+P+ FPGL++R++ PK+ LIF SG++V+T
Sbjct: 11 KIENIVATVSVDQTIDLDYLDKVLPNVE-YDPDQFPGLVFRLESPKVTALIFRSGRMVVT 69
Query: 165 GAKVRDETYTAFENIYPVLTEF 186
GAK + A + I L ++
Sbjct: 70 GAKSTADLIKAVKRIVRTLLKY 91
>gi|14424468|sp|Q55031.2|TBP_SULSH RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
Length = 198
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ +++NIV+TV L+ LDL + N EY+P +F +I R+ +PK TALIF SGKMV
Sbjct: 11 IVNIENIVATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVV 70
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKS ++ A ++ + ++K G K +IQNIV S ++ + L+ A+
Sbjct: 71 TGAKSTEELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDKAAFLLEN- 129
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLI+RM P++VLLIF SGK+VITGAK DE A + I+ L E
Sbjct: 130 NMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAEL 184
>gi|198450906|ref|XP_002137175.1| GA26713 [Drosophila pseudoobscura pseudoobscura]
gi|198131246|gb|EDY67733.1| GA26713 [Drosophila pseudoobscura pseudoobscura]
Length = 642
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V + N+ C+LDL IA + N +Y+ R + M++R P TALI++SG++ CTG
Sbjct: 241 IRNVVCSFNVGCQLDLSDIAQRGFNVKYHKSR--NLTMKLRRPAATALIWSSGRINCTGT 298
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR++AR + KLGFP F++F+I+ ++G+C + + I + + H + +
Sbjct: 299 TSEILAKVAARRFARCLWKLGFPTSFQNFRIETVLGTCRMPWDINIVNFSKKHPENAKQD 358
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+ + Y+M+ PK L IF +G I + A+V + +A E+IYP++ EFRK
Sbjct: 359 PEMHWCVTYKMQMPKATLKIFTTGSITVMAARV-NLVESAIEHIYPLVREFRK 410
>gi|886020|gb|AAC43403.1| TATA-binding protein homolog; Method: conceptual translation
supplied by author, partial [Sulfolobus shibatae]
Length = 198
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ +++NIV+TV L+ LDL + N EY+P +F +I R+ +PK TALIF SGKMV
Sbjct: 11 IVNIENIVATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVV 70
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKS ++ A ++ + ++K G K +IQNIV S ++ + L+ A+
Sbjct: 71 TGAKSTEELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDKAAFLLEN- 129
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLI+RM P++VLLIF SGK+VITGAK DE A + I+ L E
Sbjct: 130 NMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAEL 184
>gi|14423939|sp|P58178.1|TBP_SULSO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
Length = 198
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ +++NIV+TV L+ LDL + N EY+P +F +I R+ +PK TALIF SGKMV
Sbjct: 11 IVNIENIVATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVV 70
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKS ++ A ++ + ++K G K +IQNIV S ++ + L+ A+
Sbjct: 71 TGAKSTEELIKAVKRIIKTLKKYGIKIVGKPKIQIQNIVASANLHVNVNLDKAAFLLEN- 129
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+ YEPE FPGLI+RM P++VLLIF SGK+VITGAK DE A + I+ L E
Sbjct: 130 NMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAEL 184
>gi|11497985|ref|NP_069209.1| transcription factor [Archaeoglobus fulgidus DSM 4304]
gi|6647869|sp|O29874.1|TBP_ARCFU RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|2650259|gb|AAB90862.1| transcription initiation factor IID [Archaeoglobus fulgidus DSM
4304]
Length = 183
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 110/166 (66%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +DL KI+ + +++EY PK+F +++R +EPK AL+F SGK+VCTG+
Sbjct: 8 IENVVASTQIGENIDLNKISREIKDSEYKPKQFPGLVLRTKEPKAAALVFRSGKVVCTGS 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + ++ A ++ ++++++G + K+QNIV S D+ + L +A G +
Sbjct: 68 KSVEDARRAVKQIVKMLKEIGISVIDEPEVKVQNIVASADLGVDLNLNAIAIGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ P++V+LIF SGK+V+TG K ++ A E I
Sbjct: 128 YEPEQFPGLVYRLDNPRVVVLIFGSGKMVVTGGKSPEDARKAVERI 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ P+ LIF SGKMV T
Sbjct: 99 VQNIVASADLGVDLNLNAIAIGLGLENIEYEPEQFPGLVYRLDNPRVVVLIFGSGKMVVT 158
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G KS + ++ A + + ++ LG
Sbjct: 159 GGKSPEDARKAVERISEELRTLGL 182
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
KI+N+V S + I L ++ S Y+P+ FPGL+ R K+PK L+F SGK+V
Sbjct: 6 IKIENVVASTQIGENIDLNKISREI-KDSEYKPKQFPGLVLRTKEPKAAALVFRSGKVVC 64
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TG+K ++ A + I +L E
Sbjct: 65 TGSKSVEDARRAVKQIVKMLKEI 87
>gi|170035005|ref|XP_001845362.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167876820|gb|EDS40203.1| TATA-box-binding protein [Culex quinquefasciatus]
Length = 429
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L+L+ IA + N E+ + V M++R P TTA I++SGK+ CTGA
Sbjct: 266 INNVVCSFSVRCHLNLRDIAQKGFNVEFR-RENGMVTMKLRRPYTTASIWSSGKITCTGA 324
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+Y+R +QKLGF +F++F+I N++G+C + + I + + + +SYE
Sbjct: 325 TSEDSAKVAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPWGIMIVNFSEKYKKDASYE 384
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
PEL PG+ Y++ PK L IF +G I +TG
Sbjct: 385 PELHPGVTYKLYNPKATLKIFSTGSITVTG 414
>gi|452055842|gb|AGF92132.1| TATA box-binding protein, partial [Scophthalmus maximus]
Length = 72
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/72 (88%), Positives = 71/72 (98%)
Query: 40 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPA 99
NAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+LAARKYAR++QKLGFPA
Sbjct: 1 NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPA 60
Query: 100 KFKDFKIQNIVG 111
KF DFKIQN+VG
Sbjct: 61 KFLDFKIQNMVG 72
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ Y P+ F +I R+++P+ LIF SGK+V TGAK +++ A
Sbjct: 2 AEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLA 45
>gi|410916287|ref|XP_003971618.1| PREDICTED: TATA box-binding protein-like protein 1-like [Takifugu
rubripes]
Length = 185
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V+T C+LDL I + +N Y PK+ V M++R+P+ TA I+ASGK++C GA
Sbjct: 13 ISNVVATFTTGCRLDLHTIGSKGKNVIYKPKQ-GTVTMQLRKPRITANIWASGKVICIGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +KL AR+ AR +QKLGF F FK+ N++ +C + F I L + ++YE
Sbjct: 72 SSEADAKLGARRIARCLQKLGFGVTFGTFKVVNVMATCSMPFKISLVDFTMMNRFRATYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PEL P +Y MK+PK + + +G + I A A +++YP+L+E R+
Sbjct: 132 PELHPAALYTMKEPKATIKAYATGSVTIL-APSMGNVAAAVQHVYPLLSECRR 183
>gi|320100857|ref|YP_004176449.1| TATA-binding protein of transcription factor TFIID [Desulfurococcus
mucosus DSM 2162]
gi|319753209|gb|ADV64967.1| TATA binding protein of transcription factor TFIID [Desulfurococcus
mucosus DSM 2162]
Length = 193
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV+TV L+ LDL+ I + + Y P +F +I R+ +P+ TAL+F SGKMV TG
Sbjct: 13 VENIVATVILEHDLDLELIETRIPSITYKPDQFPGLIFRLDKPRATALVFKSGKMVVTGT 72
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS QQ A +K ++ K G + + +IQNIV D+ + LE AY H S Y
Sbjct: 73 KSTQQLVEAVKKIIKVFMKSGVDVRGRPRVQIQNIVAGGDIHAYVNLEKAAY-HLEDSMY 131
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
EPE FPGLI+RM+ P++VLLIF SGK+VITGAK E A NI
Sbjct: 132 EPEQFPGLIHRMRDPRVVLLIFSSGKMVITGAKEESEVERAVVNI 176
>gi|374325915|ref|YP_005084115.1| hypothetical protein P186_0409 [Pyrobaculum sp. 1860]
gi|356641184|gb|AET31863.1| hypothetical protein P186_0409 [Pyrobaculum sp. 1860]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
Query: 23 VNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSK 82
+NL +LDL+++A + AEYNP +F +I+R+ +P+ +ALIF +GKMVCTGAK+E+ K
Sbjct: 1 MNLGVELDLEQLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGAKNEEDLK 60
Query: 83 LAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPG 141
A R ++++ G F + +IQNIV S ++ + LE A + YEPE FPG
Sbjct: 61 NAVRALVKLLKDHGADVPFDPEVQIQNIVASGNLHAEVDLEQ-AVLMLENAMYEPEQFPG 119
Query: 142 LIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
LIYRM P++V+LIF SGKIV TGAK + TA + +Y L +
Sbjct: 120 LIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLYAQLKDL 164
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++DL++ L NA Y P++F +I R+ P+ LIF SGK+VCTGA
Sbjct: 85 IQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 144
Query: 76 KSEQQSKLAARKYARIIQKLG 96
KSE+ A +K ++ LG
Sbjct: 145 KSEKDVATAVQKLYAQLKDLG 165
>gi|408406051|ref|YP_006864035.1| TATA-box-binding protein [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408366647|gb|AFU60377.1| TATA-box-binding protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 187
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++N+V++ ++ ++L I + EY+P +F ++ R+R PKT LIF+SGKMVC
Sbjct: 7 IVSIENVVASATVNQTVNLNLITQIFPDVEYHPDQFPGLVFRLRSPKTATLIFSSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKSE+ + A + ++K G P + + +IQNIV S + I LE LA
Sbjct: 67 TGAKSEKMAIQAVKNVVLKLKKGGIPLEHEPQIEIQNIVASASLGGKIHLE-LAARVLPR 125
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK E Y A N++ +L E
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESEVYRAVGNLHTLLEE 179
>gi|407464492|ref|YP_006775374.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
gi|407047680|gb|AFS82432.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++ K+DL +I + EY+P +F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSVENVVASADVMQKMDLNEITRTFPDVEYHPDQFPGLVFRLKTPKTATLIFTSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG+KSE+ ++ A + + ++K G K KD IQNIV S ++ I LE A +
Sbjct: 67 TGSKSEEMARKAVKTVVQKLRKGGIKVK-KDAVVTIQNIVASINLGGKIHLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKQEPDVYRSVNNLHALLEE 179
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +++NIV+++NL K+ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 AVVTIQNIVASINLGGKIHLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKQE 163
>gi|386875594|ref|ZP_10117754.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
gi|386806582|gb|EIJ66041.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
Length = 186
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++ K+DL +I + EY+P +F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSVENVVASADVMQKMDLNEITRTFPDVEYHPDQFPGLVFRLKTPKTATLIFTSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG+KSE+ ++ A + + ++K G K KD IQNIV S ++ I LE A +
Sbjct: 67 TGSKSEEMARKAVKTVVQKLRKGGIKVK-KDAVVTIQNIVASINLGGKIHLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKHEPDVYRSVNNLHALLEE 179
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +++NIV+++NL K+ L++ A + Y P++F +I R+ +PKT L+F+SGK+V
Sbjct: 97 AVVTIQNIVASINLGGKIHLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKHE 163
>gi|328794393|ref|XP_001123347.2| PREDICTED: TATA-box-binding protein-like, partial [Apis mellifera]
Length = 169
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 79/99 (79%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+VSTVNL +L L I + RN+EYNP RF +IMRIR P+ TALIF SGK+VCTGA
Sbjct: 68 LQNVVSTVNLGIELPLMYINTRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIVCTGA 127
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCD 114
+SE+ S LA RK+ARIIQKLGF AKF +FKIQNIV +CD
Sbjct: 128 RSEEDSYLATRKFARIIQKLGFAAKFYNFKIQNIVATCD 166
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
+QN+V + ++ + L + + S Y P F GLI R++ P+ LIF SGKIV TG
Sbjct: 68 LQNVVSTVNLGIELPLMYIN-TRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIVCTG 126
Query: 166 AKVRDETYTA 175
A+ +++Y A
Sbjct: 127 ARSEEDSYLA 136
>gi|328719261|ref|XP_003246709.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 1
[Acyrthosiphon pisum]
gi|328719263|ref|XP_003246710.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 288
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 113/174 (64%), Gaps = 3/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ N+ ++ N+ L+L+ +AL N EY ++ A ++M++R+P TA+I++SGK+VC G
Sbjct: 55 NISNVSASFNVKSHLNLRYLALHGHNVEYKREK-AKLVMKLRKPSATAIIWSSGKIVCIG 113
Query: 75 AKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
+ SE SK+A+++ ARIIQ+LG+ AKF FKI N++GSC + F IR+ + + S
Sbjct: 114 SASEYDSKIASKRIARIIQRLGYSDAKFSSFKIINVLGSCSLPFSIRIIQFSEKYKLNSQ 173
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
YEPEL PG+ YR+K+ K L I+ +G I + A A E+IYP++ F+
Sbjct: 174 YEPELNPGVTYRIKEFKATLKIYSTGSITV-NASSEAIVQLAIEHIYPLVLPFK 226
>gi|222481286|ref|YP_002567522.1| transcription factor [Halorubrum lacusprofundi ATCC 49239]
gi|222454662|gb|ACM58925.1| TATA-box binding family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 186
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ +D +LDL+ + AE+NP F ++ R ++PK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIDQELDLETLVDDIPGAEFNPDNFPGLVDRTQDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
A S A +++LG P + +QNIV S D+ + + L LA G
Sbjct: 69 AASVDDVHEALEIIFEKLRELGIPVTDSPEITVQNIVSSADLGYDLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM+ P +V+L+F SGKIVITG K ++ A ENI
Sbjct: 129 EYEPEQFPGLVYRMEDPGVVILLFGSGKIVITGGKFAEDATAAVENI 175
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNL--DCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L D L+ I L + EY P++F ++ R+ +P L+F SGK+V
Sbjct: 100 TVQNIVSSADLGYDLNLNALAIGLGLEDVEYEPEQFPGLVYRMEDPGVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + + A I LG
Sbjct: 160 TGGKFAEDATAAVENIVEKIDDLGL 184
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 99 AKFKDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFV 157
A + +IQN+V S + + LE L GA + P+ FPGL+ R + PK LIF
Sbjct: 3 APTETIEIQNVVASTGIDQELDLETLVDDIPGA--EFNPDNFPGLVDRTQDPKAAALIFR 60
Query: 158 SGKIVITGAKVRDETYTAFENIYPVLTEF 186
SGKIV TGA D+ + A E I+ L E
Sbjct: 61 SGKIVCTGAASVDDVHEALEIIFEKLREL 89
>gi|348565514|ref|XP_003468548.1| PREDICTED: TATA box-binding protein-like protein 1-like [Cavia
porcellus]
Length = 165
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
PEL P + YR+K + L IF +G I +TG
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>gi|123395858|ref|XP_001300812.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881909|gb|EAX87882.1| hypothetical protein TVAG_285070 [Trichomonas vaginalis G3]
Length = 233
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 16 VKNIVSTVNLDC-KLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
V N+++ C KL+L IA RNAEY PKR AV++RIR+PK T L+F++GK+ G
Sbjct: 51 VVNVIALAQYSCNKLNLVSIASTIRNAEYKPKRIKAVVIRIRDPKATGLVFSNGKINIVG 110
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYS--HGAFS 132
+S + +K AA K+ +++Q++G+ K + I +IV + F I + +A + H F
Sbjct: 111 CRSVEDAKRAAHKFRKMLQQIGYDVKLVNITISSIVATIHTPFNIAIAQIASADGHKLFC 170
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
Y PE F GLIYR+ P+ +LIF SG IV+T AK D+ IYPVL +F K
Sbjct: 171 QYRPEKFAGLIYRLTDPQCTMLIFQSGSIVLT-AKSEDDLTAGSNWIYPVLQKFEK 225
>gi|288559645|ref|YP_003423131.1| TATA-box binding protein Tbp [Methanobrevibacter ruminantium M1]
gi|288542355|gb|ADC46239.1| TATA-box binding protein Tbp [Methanobrevibacter ruminantium M1]
Length = 181
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ ++ + L ++A ++N ++F ++ ++++PKT ALIF+SGK+VCTGA
Sbjct: 8 IENIVASASIGKDIVLTEVAKALEGVDFNREQFPGLVFKLQDPKTAALIFSSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLG--FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS SKLA +K +++ + P +F D KIQNIV S +++ + LE +A +
Sbjct: 68 KSIDDSKLAIKKTVDLMRTIDTEIPHEF-DIKIQNIVASANLQSTLNLEAVALEL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+VLL+F SGK+V TGAK + + EN L+E
Sbjct: 126 YEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTKQDARLGVENAKARLSEL 178
>gi|83764126|emb|CAJ12158.1| trf2 protein [Drosophila simulans]
Length = 196
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + ++ C L L+ IALQ N EY + V M++R P TTA I++SG++ CTGA
Sbjct: 64 INNVVCSFSVGCHLKLRDIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTGA 122
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR+YAR + KLGFP +F +F+I N++G+C + + I++ + H +SYE
Sbjct: 123 TSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE 182
Query: 136 PELFPGLIYRMKQP 149
PEL PG+ Y+M+ P
Sbjct: 183 PELHPGVTYKMRDP 196
>gi|304313987|ref|YP_003849134.1| TATA-box binding protein [Methanothermobacter marburgensis str.
Marburg]
gi|302587446|gb|ADL57821.1| TATA-box binding protein [Methanothermobacter marburgensis str.
Marburg]
Length = 181
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ L +DL+ +A N ++N ++F ++ +++EPKT ALIF SGK+VCTGA
Sbjct: 8 IENIVASATLGKSIDLQTVAEALENVDFNREQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + SK A + +++ + P +F + KIQNIV S ++ P+ LE +A +
Sbjct: 68 KSIEDSKRAIKLTVDMMRTMDPDIPEEF-EIKIQNIVASANLGKPLNLEAVALGL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +PK+VLL+F SGK+V TGAK ++ E L E
Sbjct: 126 YEPEQFPGLVYRLDEPKVVLLLFGSGKVVCTGAKSAEDAKLGVEKTKARLAEL 178
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
D KI+NIV S + I L+ +A + + E FPGL+Y++K+PK LIF SGK+V
Sbjct: 5 DIKIENIVASATLGKSIDLQTVAEALENV-DFNREQFPGLVYKLKEPKTAALIFGSGKLV 63
Query: 163 ITGAKVRDETYTAF 176
TGAK +++ A
Sbjct: 64 CTGAKSIEDSKRAI 77
>gi|393796700|ref|ZP_10380064.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 187
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S+ N+V++ +D K DL I + + EY+P +F ++ R++ PKT LIF +GKMVCTG
Sbjct: 9 SIVNVVASATVDQKFDLNDITKKFPDTEYHPDQFPGLVFRLKNPKTATLIFRTGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
+KSE+ ++ A + + ++K G K KD +QNIV S ++ + LE A + S
Sbjct: 69 SKSEEMARSAVKTVVQKLRKEGVKVK-KDAVVTVQNIVASINLGGKVHLEKAARTL-PRS 126
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+RM PK V+LIF SGK+V TGAK + + + N++ +L E
Sbjct: 127 MYEPEQFPGLIHRMLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHSLLEE 179
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+++NL K+ L+K A + Y P++F +I R+ +PKT LIF+SGK+V
Sbjct: 97 AVVTVQNIVASINLGGKVHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILIFSSGKLV 156
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
CTGAK+E + ++++ G
Sbjct: 157 CTGAKNESDVFRSVHNLHSLLEEKGL 182
>gi|407463138|ref|YP_006774455.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046760|gb|AFS81513.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 187
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 113/177 (63%), Gaps = 8/177 (4%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL +I + + EY+P++F ++ R++ P+T LIF +GKMVC
Sbjct: 7 IVSVENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLKSPRTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSH 128
TGAKSE+ +A + ++QKL K K+ +QNIV + ++ I LE A +
Sbjct: 67 TGAKSEE---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKAARTL 123
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ VL E
Sbjct: 124 -PRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSVLEE 179
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|15679622|ref|NP_276739.1| transcription factor [Methanothermobacter thermautotrophicus str.
Delta H]
gi|6647868|sp|O27664.1|TBP_METTH RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|2622753|gb|AAB86100.1| TATA-binding transcription initiation factor [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 181
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ L +DL+ +A N ++N ++F ++ +++EPKT ALIF SGK+VCTGA
Sbjct: 8 IENIVASATLGKSIDLQTVAEALENVDFNREQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + SK A + +++ + P +F + KIQNIV S ++ P+ LE +A +
Sbjct: 68 KSIEDSKRAIKLTVDMMRTMDPDIPEEF-EIKIQNIVASANLGKPLNLEAVALGL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+VLL+F SGK+V TGAK ++ E L E
Sbjct: 126 YEPEQFPGLVYRLDDPKVVLLLFGSGKVVCTGAKSAEDAKLGVEKTKARLAEL 178
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
D KI+NIV S + I L+ +A + + E FPGL+Y++K+PK LIF SGK+V
Sbjct: 5 DIKIENIVASATLGKSIDLQTVAEALENV-DFNREQFPGLVYKLKEPKTAALIFGSGKLV 63
Query: 163 ITGAKVRDETYTAF 176
TGAK +++ A
Sbjct: 64 CTGAKSIEDSKRAI 77
>gi|325188734|emb|CCA23265.1| TATAboxbinding protein putative [Albugo laibachii Nc14]
Length = 216
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKR-FAAVIMRIREPKTTALIFASGKMVCTGAK 76
N++ + ++ LD+K +AL RNA+Y + F +I+R R P+ + + + SGK + GAK
Sbjct: 30 NLLGSGSIRGALDVKNLALMIRNADYAVRGGFNGMILRFRTPRASVIAYRSGKFIVIGAK 89
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
S + L +K+ I+QK G P + FKI N +CD+KF +AY A + YEP
Sbjct: 90 SPAVADLVIQKFQDILQKSGAPHELVSFKIHNFCAACDLKF----RKIAYKD-ASAQYEP 144
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
ELFPGLIYRM PK +L+F+SGKIVITG + ++ A NI+PVL +FR
Sbjct: 145 ELFPGLIYRMLVPKCTMLVFISGKIVITGFQKIEDGEQALCNIFPVLCKFR 195
>gi|329764975|ref|ZP_08256562.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138512|gb|EGG42761.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Candidatus Nitrosoarchaeum limnia SFB1]
Length = 187
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S+ N+V++ +D K DL I + + EY+P +F ++ R++ PKT LIF +GKMVCTG
Sbjct: 9 SIVNVVASATVDQKFDLNDITKKFPDTEYHPDQFPGLVFRLKNPKTATLIFRTGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
+KSE+ ++ A + + ++K G K KD +QNIV S ++ + LE A + S
Sbjct: 69 SKSEEMARNAVKTVVQKLRKEGVKVK-KDAVVTVQNIVASINLGGKVHLEKAARTL-PRS 126
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+RM PK V+LIF SGK+V TGAK + + + N++ +L E
Sbjct: 127 MYEPEQFPGLIHRMLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHSLLEE 179
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+++NL K+ L+K A + Y P++F +I R+ +PKT LIF+SGK+V
Sbjct: 97 AVVTVQNIVASINLGGKVHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILIFSSGKLV 156
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
CTGAK+E + ++++ G
Sbjct: 157 CTGAKNESDVFRSVHNLHSLLEEKGL 182
>gi|195143693|ref|XP_002012832.1| GL23716 [Drosophila persimilis]
gi|194101775|gb|EDW23818.1| GL23716 [Drosophila persimilis]
Length = 640
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V + N+ C+LDL IA + N +Y+ R + M++R P TALI++SG++ CTG
Sbjct: 241 IRNVVCSFNVGCQLDLSDIAQRGFNVKYHRSR--NLTMKLRRPAATALIWSSGRINCTGT 298
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE +K+AAR++AR + KLGFP +F++F+I+ ++G+C + + I + + H + E
Sbjct: 299 TSEILAKVAARRFARCLWKLGFPTRFQNFRIETVLGTCRMPWDINIVNFSKKHPENAKQE 358
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
PE+ + Y+M+ PK L IF +G I + A V + +A +IYP + EFRK
Sbjct: 359 PEMHWCVTYKMQMPKATLKIFTTGSITVMAASV-NLVESAIGHIYPPVREFRK 410
>gi|118575298|ref|YP_875041.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
gi|118193819|gb|ABK76737.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
Length = 186
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 109/175 (62%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL + + + EYNP++F ++ R+ PKT LIF +GKMVC
Sbjct: 7 IVSVENVVASASVDQKIDLNDVTKKFPDTEYNPEQFPGLVFRLTSPKTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TGAKSE + A R + ++K G K KD +QNIV + ++ I LE A
Sbjct: 67 TGAKSEDMAVKAVRTVVQKLRKSGIKIK-KDAVVVVQNIVAAINLGGKIHLEKAARVL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDMYRSVYNLHALLEE 179
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVVVVQNIVAAINLGGKIHLEKAARVLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSEQQ 80
CTGAK E
Sbjct: 157 CTGAKKESD 165
>gi|390938384|ref|YP_006402122.1| TATA binding protein of transcription factor TFIID [Desulfurococcus
fermentans DSM 16532]
gi|390191491|gb|AFL66547.1| TATA binding protein of transcription factor TFIID [Desulfurococcus
fermentans DSM 16532]
Length = 194
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV+TV L+ LDL+ I + + Y P +F +I R+ +P+ TAL+F SGKMV TG
Sbjct: 12 VENIVATVILEHDLDLELIETRIPSITYKPDQFPGLIFRLDKPRATALVFKSGKMVVTGT 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS QQ A +K + K G + +IQNIV D+ + LE AY H S Y
Sbjct: 72 KSTQQLVEAVKKIIKTFVKNGVNVHGRPRVQIQNIVAGGDIHAYVNLEKAAY-HLEDSMY 130
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
EPE FPGLI+RM+ P++VLLIF SGK+VITGAK E A NI
Sbjct: 131 EPEQFPGLIHRMRDPRVVLLIFSSGKMVITGAKEEVEVERAVNNI 175
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+ ++ ++L+K A ++ Y P++F +I R+R+P+ LIF+SGKMV TGA
Sbjct: 103 IQNIVAGGDIHAYVNLEKAAYHLEDSMYEPEQFPGLIHRMRDPRVVLLIFSSGKMVITGA 162
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K E + + A AR + K G
Sbjct: 163 KEEVEVERAVNNIARQLYKAG 183
>gi|336121024|ref|YP_004575799.1| TATA-box-binding protein [Methanothermococcus okinawensis IH1]
gi|334855545|gb|AEH06021.1| TATA-box-binding protein [Methanothermococcus okinawensis IH1]
Length = 181
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ EPK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTKIGNDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGKLNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K +++ GF + + K+QN+V + ++ L+ +A G + YEP
Sbjct: 69 KEEAEIAIKKVIGYLKEAGFEIDENPEVKVQNMVATAELGIEPNLDDIATLEG--TEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YR+ PK+V+LIF SGK+VITG K +++ Y A E I L E +
Sbjct: 127 EQFPGLVYRLDNPKVVVLIFGSGKVVITGLKHKEDAYIALEKILNTLKEMEE 178
>gi|218883586|ref|YP_002427968.1| transcription factor [Desulfurococcus kamchatkensis 1221n]
gi|218765202|gb|ACL10601.1| transcription factor - TATA-box-binding protein [Desulfurococcus
kamchatkensis 1221n]
Length = 194
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV+TV L+ LDL+ I + + Y P +F +I R+ +P+ TAL+F SGKMV TG
Sbjct: 12 VENIVATVILEHDLDLELIETRIPSITYKPDQFPGLIFRLDKPRATALVFKSGKMVVTGT 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS QQ A +K + K G + +IQNIV D+ + LE AY H S Y
Sbjct: 72 KSTQQLVEAVKKIIKTFVKNGVNVHGRPRVQIQNIVAGGDIHAYVNLEKAAY-HLEDSMY 130
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
EPE FPGLI+RM+ P++VLLIF SGK+VITGAK E A NI
Sbjct: 131 EPEQFPGLIHRMRDPRVVLLIFSSGKMVITGAKEEVEVERAVNNI 175
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+ ++ ++L+K A ++ Y P++F +I R+R+P+ LIF+SGKMV TGA
Sbjct: 103 IQNIVAGGDIHAYVNLEKAAYHLEDSMYEPEQFPGLIHRMRDPRVVLLIFSSGKMVITGA 162
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K E + + A AR + K G
Sbjct: 163 KEEVEVERAVNNIARQLYKAG 183
>gi|148642780|ref|YP_001273293.1| transcription factor [Methanobrevibacter smithii ATCC 35061]
gi|222445725|ref|ZP_03608240.1| hypothetical protein METSMIALI_01367 [Methanobrevibacter smithii
DSM 2375]
gi|261349727|ref|ZP_05975144.1| TATA-box-binding protein [Methanobrevibacter smithii DSM 2374]
gi|166227821|sp|A5UL47.1|TBP_METS3 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|148551797|gb|ABQ86925.1| transcription initiation factor TFIID TATA binding protein
[Methanobrevibacter smithii ATCC 35061]
gi|222435290|gb|EEE42455.1| transcription factor [Methanobrevibacter smithii DSM 2375]
gi|288861682|gb|EFC93980.1| TATA-box-binding protein [Methanobrevibacter smithii DSM 2374]
Length = 181
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 110/173 (63%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ ++ + L +++ +N ++F ++ ++++PKT ALIF+SGK+VCTGA
Sbjct: 8 IENIVASASIGKDIVLTEVSEALEGVNFNREQFPGLVFKLKDPKTAALIFSSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLG--FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS SKLA +K +++ + P +F + KIQNIV S +++ + LE +A +
Sbjct: 68 KSIDDSKLAIKKTVDLMRTIDTEIPHEF-EIKIQNIVASANLESTLNLEAVALELED-TE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+VLL+F SGK+V TGAK R + E Y L+E
Sbjct: 126 YEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTRSDAKLGVERAYDRLSEL 178
>gi|389847270|ref|YP_006349509.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448614785|ref|ZP_21663813.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388244576|gb|AFK19522.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445752872|gb|EMA04291.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 186
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A +++L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHDALEIIFDKLRELQIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +PK+V+L+F SGKIVITG K D+ TA E I
Sbjct: 129 EYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + A E I+ L E +
Sbjct: 67 TGAKSIDDVHDALEIIFDKLRELQ 90
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EPK L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I LG
Sbjct: 160 TGGKRTDDAETAVEEIVERIDALGL 184
>gi|161529027|ref|YP_001582853.1| TATA-box binding family protein [Nitrosopumilus maritimus SCM1]
gi|160340328|gb|ABX13415.1| TATA-box binding family protein [Nitrosopumilus maritimus SCM1]
Length = 187
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL +I + + EY+P++F ++ R+ P+T LIF +GKMVC
Sbjct: 7 IVSVENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLSTPRTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSH 128
TGAKSE+ +A + ++QKL K K+ +QNIV + ++ I LE A +
Sbjct: 67 TGAKSEE---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKAARTL 123
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ VL E
Sbjct: 124 -PRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSVLEE 179
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|21706933|gb|AAH33926.1| Tbpl1 protein [Mus musculus]
Length = 188
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
PEL P + YR+K + L IF +G I +T
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVT 160
>gi|167043299|gb|ABZ08004.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_ANIW141M18]
Length = 186
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++N+V++ ++D +DLK + + E++P +F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSIENVVASASVDQAIDLKDVTKKFPETEWHPDQFPGLVFRLKSPKTATLIFRSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG KSE + A R + ++K K KD +QNIV S + I LE A
Sbjct: 67 TGGKSEAMAIKAVRTVVKQLRKGKIKIK-KDAVITVQNIVASGSLGGKIHLED-AARRLP 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK VLL+F SGK+V TGAK + Y + NI+ +L E
Sbjct: 125 HSMYEPEQFPGLIHRMVDPKTVLLLFASGKLVCTGAKKESDVYKSVHNIHALLEE 179
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV++ +L K+ L+ A + ++ Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVASGSLGGKIHLEDAARRLPHSMYEPEQFPGLIHRMVDPKTVLLLFASGKLV 156
Query: 72 CTGAKSEQQ 80
CTGAK E
Sbjct: 157 CTGAKKESD 165
>gi|339237017|ref|XP_003380063.1| TATA-box-binding protein [Trichinella spiralis]
gi|316977178|gb|EFV60321.1| TATA-box-binding protein [Trichinella spiralis]
Length = 315
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V+ N+ C LDL IA+ N Y R +I +I++P+ +++SGK+ +GA
Sbjct: 108 IRNVVTMFNVCCHLDLHHIAMHTCNVIYERYR-GVLIFQIKKPRCYVKMWSSGKITVSGA 166
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+SE++++ ++R ARI+QK+ P +F D+++ NI+ +C + F IR+ LA + SSY
Sbjct: 167 QSEEEARKSSRSVARIVQKIVGPRVRFADYRVTNIMATCKLPFGIRIPNLATEYPRESSY 226
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPEL GL++R PK L I +G I ITGA+ + + T E++YP+L F+
Sbjct: 227 EPELSIGLVWRSASPKATLRIHSTGSITITGAESQADILTVMESLYPILVRFK 279
>gi|118638415|gb|ABL09366.1| TATA-box binding protein alternative transcript cTBP2 [Gallus
gallus]
Length = 81
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 69/79 (87%)
Query: 110 VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVR 169
VGSCDVKFPIRLEGL +H FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+TGAKVR
Sbjct: 1 VGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVR 60
Query: 170 DETYTAFENIYPVLTEFRK 188
E Y AFENIYP+L FRK
Sbjct: 61 AEIYEAFENIYPILKGFRK 79
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 20 VSTVNLDCKLDLKKIALQARN-AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
V + ++ + L+ + L + + Y P+ F +I R+ +P+ LIF SGK+V TGAK
Sbjct: 1 VGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 58
>gi|149032878|gb|EDL87733.1| rCG41948, isoform CRA_b [Rattus norvegicus]
gi|149032879|gb|EDL87734.1| rCG41948, isoform CRA_b [Rattus norvegicus]
Length = 218
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+++K AR+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
PEL P + YR+K + L IF +G I +T
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVT 160
>gi|19073311|gb|AAL84756.1|AF469636_1 TATA binding protein D [Halobacterium sp. GN101]
Length = 186
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L +L L+++A A+YNP+ F VI R+ +P +T LIF SGK VCTGA
Sbjct: 10 IENVVASSTLGAELALEQLAADLPGADYNPEEFPGVIYRLDDPPSTTLIFDSGKAVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
++ A +++LG A +QNIV S D+ P+ L +A G +
Sbjct: 70 QTVDDVHEALSIVVEDLRELGIDIAADPPVDVQNIVCSADLDQPLNLNAIAIGLGLEAIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V+L+F SGK+VITG D+ A E+++ LT+
Sbjct: 130 YEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGGSDPDDATVALEDVHDRLTDL 182
>gi|448540133|ref|ZP_21623370.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|448551731|ref|ZP_21629465.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|448553994|ref|ZP_21630784.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|445710007|gb|ELZ61830.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|445710121|gb|ELZ61943.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|445719179|gb|ELZ70861.1| transcription factor [Haloferax sp. ATCC BAA-644]
Length = 188
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A +LG P D +QNIV S D+ + L LA G +
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK + TA E +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVSDAETALETV 177
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPVELDLERLSLDMNG-TDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGA D+ TA E ++ TE
Sbjct: 69 TGADSVDDVSTAIETLFDEFTEL 91
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A +++LG
Sbjct: 162 TGAKRVSDAETALETVDDDVRELGL 186
>gi|167044379|gb|ABZ09056.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_APKG6D3]
Length = 186
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++N+V++ ++D +DLK + + E++P++F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSIENVVASASVDQAIDLKDVTKKFPETEWHPEQFPGLVFRLKSPKTATLIFRSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG KSE + A R + ++K K KD +QNIV S + I LE A
Sbjct: 67 TGGKSEAMAIKAVRTVVKQLRKGKIKIK-KDAVITVQNIVASGSLGGKIHLED-AARRLP 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK VLL+F SGK+V TGAK + Y + NI+ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMVDPKTVLLLFASGKLVCTGAKKESDVYKSVHNIHALLEE 179
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV++ +L K+ L+ A + + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVASGSLGGKIHLEDAARRLPRSMYEPEQFPGLIHRMVDPKTVLLLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|296109497|ref|YP_003616446.1| TATA-box binding family protein [methanocaldococcus infernus ME]
gi|295434311|gb|ADG13482.1| TATA-box binding family protein [Methanocaldococcus infernus ME]
Length = 187
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 110/175 (62%), Gaps = 2/175 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+++AL NAEY P++F ++ R+ +PK L+F SGK+ CTGAKS
Sbjct: 8 NVVVSTKIADSIDLEEVALVLENAEYEPEQFPGLVCRLNDPKVALLMFRSGKVNCTGAKS 67
Query: 78 EQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
+++++ A +K + ++ GF + K+QN+V + D+ F L +A + + YEP
Sbjct: 68 KEEAERAIKKIIKELKDAGFDVNENPEIKVQNMVATADLGFEPDLNEIAI-YVDETEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A E I + E ++++
Sbjct: 127 EQFPGLVYRLNDPKVVVLIFGSGKVVITGLKSEEDAKKALEKIKETIREIQEMED 181
>gi|448604603|ref|ZP_21657770.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|448624485|ref|ZP_21670433.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445744012|gb|ELZ95492.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|445749690|gb|EMA01132.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 186
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A +++L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHDALGIIFDKLRELQIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +PK+V+L+F SGKIVITG K D+ TA E I
Sbjct: 129 EYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + A I+ L E +
Sbjct: 67 TGAKSIDDVHDALGIIFDKLRELQ 90
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EPK L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I LG
Sbjct: 160 TGGKRTDDAETAVEEIVERIDALGL 184
>gi|329766561|ref|ZP_08258104.1| TATA-box binding family protein [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393796800|ref|ZP_10380164.1| TATA-box binding family protein [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329136816|gb|EGG41109.1| TATA-box binding family protein [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 187
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL +I + + EY+P++F ++ R++ P+T LIF +GKMVC
Sbjct: 7 IVSVENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLQNPRTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSH 128
TGAKSE +A + ++QKL K K+ +QNIV + ++ I LE A +
Sbjct: 67 TGAKSED---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKAARTL 123
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 124 -PRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSLLEE 179
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|448576280|ref|ZP_21642323.1| transcription factor [Haloferax larsenii JCM 13917]
gi|448591579|ref|ZP_21651067.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445729960|gb|ELZ81554.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445733553|gb|ELZ85122.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 186
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A +++L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHEALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +PK+V+L+F SGKIVITG K D+ TA E I
Sbjct: 129 EYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + A I+ L E +
Sbjct: 67 TGAKSIDDVHEALGIIFDKLRELK 90
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EPK L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I LG
Sbjct: 160 TGGKRTDDAETAVEEIVERIDALGL 184
>gi|292655873|ref|YP_003535770.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|433422047|ref|ZP_20405902.1| transcription factor [Haloferax sp. BAB2207]
gi|448289862|ref|ZP_21481024.1| transcription factor [Haloferax volcanii DS2]
gi|448539630|ref|ZP_21623096.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|448555929|ref|ZP_21631787.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|448562556|ref|ZP_21635514.1| transcription factor [Haloferax prahovense DSM 18310]
gi|448570482|ref|ZP_21639312.1| transcription factor [Haloferax lucentense DSM 14919]
gi|448585086|ref|ZP_21647695.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|448595442|ref|ZP_21653145.1| transcription factor [Haloferax alexandrinus JCM 10717]
gi|302595861|sp|D4H071.1|TBP2_HALVD RecName: Full=TATA-box-binding protein 2; AltName: Full=Box
A-binding protein 2; Short=BAP 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP 2; AltName:
Full=TATA-box factor 2
gi|291372685|gb|ADE04912.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|432198733|gb|ELK54984.1| transcription factor [Haloferax sp. BAB2207]
gi|445581044|gb|ELY35408.1| transcription factor [Haloferax volcanii DS2]
gi|445710372|gb|ELZ62187.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|445717214|gb|ELZ68934.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|445718874|gb|ELZ70558.1| transcription factor [Haloferax prahovense DSM 18310]
gi|445723129|gb|ELZ74776.1| transcription factor [Haloferax lucentense DSM 14919]
gi|445727425|gb|ELZ79038.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|445742896|gb|ELZ94386.1| transcription factor [Haloferax alexandrinus JCM 10717]
Length = 186
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A +++L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHDALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +PK+V+L+F SGKIVITG K D+ TA E I
Sbjct: 129 EYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + A I+ L E +
Sbjct: 67 TGAKSIDDVHDALGIIFDKLRELK 90
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EPK L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I LG
Sbjct: 160 TGGKRTDDAETAVEEIVERIDALGL 184
>gi|167045405|gb|ABZ10060.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_APKG10F15]
Length = 186
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++N+V++ ++D +DLK + + E++P +F ++ R++ PKT LIF SGKMVC
Sbjct: 7 IVSIENVVASASVDQAIDLKDVTKKFPETEWHPDQFPGLVFRLKSPKTATLIFRSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGA 130
TG KSE + A R + ++K K KD +QNIV S + I LE A
Sbjct: 67 TGGKSEAMAIKAVRTVVKQLRKGKIKIK-KDAVITVQNIVASGSLGGKIHLED-AARRLP 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK VLL+F SGK+V TGAK + Y + NI+ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMVDPKTVLLLFASGKLVCTGAKKESDVYKSVHNIHALLEE 179
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV++ +L K+ L+ A + + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVASGSLGGKIHLEDAARRLPRSMYEPEQFPGLIHRMVDPKTVLLLFASGKLV 156
Query: 72 CTGAKSEQQ 80
CTGAK E
Sbjct: 157 CTGAKKESD 165
>gi|116753474|ref|YP_842592.1| transcription factor [Methanosaeta thermophila PT]
gi|121693723|sp|A0B5H8.1|TBP_METTP RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|116664925|gb|ABK13952.1| TATA binding protein of transcription factor TFIID [Methanosaeta
thermophila PT]
Length = 183
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ L + DL KI + AEYN ++F ++ R++ PK LIF SGK+VCTG
Sbjct: 6 NIENVVASTKLADEFDLVKIESELEGAEYNKEKFPGLVYRVKSPKAAFLIFTSGKVVCTG 65
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKF--KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AK+ + + AR ++ +GF + +QNIV S D+K + L +A G +
Sbjct: 66 AKNVEDVRTVITNMARTLKSIGFDNINLEPEIHVQNIVASADLKTDLNLNAIALGLGLEN 125
Query: 133 -SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YR+KQPK+V+LIF SGK+V+TG K +E
Sbjct: 126 IEYEPEQFPGLVYRIKQPKVVVLIFSSGKLVVTGGKSPEE 165
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQA--RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IAL N EY P++F ++ RI++PK LIF+SGK+V T
Sbjct: 99 VQNIVASADLKTDLNLNAIALGLGLENIEYEPEQFPGLVYRIKQPKVVVLIFSSGKLVVT 158
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G KS ++ + R + ++ LG
Sbjct: 159 GGKSPEECEEGVRIVRQQLENLGL 182
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 104 FKIQNIVGSCD-------VKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIF 156
I+N+V S VK LEG + Y E FPGL+YR+K PK LIF
Sbjct: 5 INIENVVASTKLADEFDLVKIESELEG--------AEYNKEKFPGLVYRVKSPKAAFLIF 56
Query: 157 VSGKIVITGAKVRDETYTAFENIYPVL 183
SGK+V TGAK ++ T N+ L
Sbjct: 57 TSGKVVCTGAKNVEDVRTVITNMARTL 83
>gi|448608858|ref|ZP_21660137.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445747235|gb|ELZ98691.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 186
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 99/166 (59%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A +++L P + +QNIV S D+ + L LA G
Sbjct: 70 KSIDDVHDALGIIFDKLRELQIPVDDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +PK+V+L+F SGKIVITG K D+ TA E I
Sbjct: 130 YEPEQFPGLVYRMDKPKVVILLFGSGKIVITGGKQTDDAATAVEEI 175
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + A I+ L E +
Sbjct: 67 TGAKSIDDVHDALGIIFDKLRELQ 90
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ +PK L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDKPKVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + A + I LG
Sbjct: 160 TGGKQTDDAATAVEEIVERIDALGL 184
>gi|72133443|ref|XP_798726.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Strongylocentrotus purpuratus]
Length = 325
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+V + C L+L++I N EY + + V MR R P TA I++SGK+ TG
Sbjct: 102 INNVVCAFGVRCHLNLRRIGQYGSNVEYR-REYGKVNMRFRRPSATATIWSSGKITITGN 160
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 135
SE+ +K AR+ AR +QKLGF + +K+ N++G+C + F IR+ + H +SYE
Sbjct: 161 DSEEHAKKNARRCARALQKLGFNVRLSKYKVVNVLGTCSMPFAIRIRDFSEKHQNSASYE 220
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
PEL P + Y++ QP+ L IF +G I +T V + + A E IYP++ R
Sbjct: 221 PELHPAVTYKLYQPRATLKIFSTGSITVTAPAVGNIS-EAIEFIYPLVEAHR 271
>gi|393796304|ref|ZP_10379668.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Candidatus Nitrosoarchaeum limnia BG20]
Length = 186
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S+ N+V++ +D KLDL I + + EY+P++F + R++ PKT L+F+SGKMVCTG
Sbjct: 9 SIVNVVASATIDQKLDLVDITKKFPDVEYHPEQFPGAVFRLKNPKTATLLFSSGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
AKS++ ++ A K +++K K + + IQNIV S ++ + LE A + S
Sbjct: 69 AKSQELAETAVAKVVSMLKKGKIKIKNEAEVTIQNIVSSINLGGRVNLEQAARTL-PRSM 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+RM PK V+LIF SGK+V GAK+ + + + I+ +L E
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILIFSSGKLVCVGAKLEKDVHRSVNQIHSLLEE 179
>gi|227827548|ref|YP_002829328.1| transcription factor [Sulfolobus islandicus M.14.25]
gi|227830235|ref|YP_002832015.1| transcription factor [Sulfolobus islandicus L.S.2.15]
gi|229579050|ref|YP_002837448.1| transcription factor [Sulfolobus islandicus Y.G.57.14]
gi|229582199|ref|YP_002840598.1| transcription factor [Sulfolobus islandicus Y.N.15.51]
gi|229584751|ref|YP_002843253.1| transcription factor [Sulfolobus islandicus M.16.27]
gi|238619705|ref|YP_002914531.1| transcription factor [Sulfolobus islandicus M.16.4]
gi|284997658|ref|YP_003419425.1| TATA-box binding protein [Sulfolobus islandicus L.D.8.5]
gi|385773217|ref|YP_005645783.1| TATA-box binding family protein [Sulfolobus islandicus HVE10/4]
gi|385775851|ref|YP_005648419.1| TATA-box binding family protein [Sulfolobus islandicus REY15A]
gi|227456683|gb|ACP35370.1| TATA-box binding family protein [Sulfolobus islandicus L.S.2.15]
gi|227459344|gb|ACP38030.1| TATA-box binding family protein [Sulfolobus islandicus M.14.25]
gi|228009764|gb|ACP45526.1| TATA-box binding family protein [Sulfolobus islandicus Y.G.57.14]
gi|228012915|gb|ACP48676.1| TATA-box binding family protein [Sulfolobus islandicus Y.N.15.51]
gi|228019801|gb|ACP55208.1| TATA-box binding family protein [Sulfolobus islandicus M.16.27]
gi|238380775|gb|ACR41863.1| TATA-box binding family protein [Sulfolobus islandicus M.16.4]
gi|284445553|gb|ADB87055.1| TATA-box binding protein [Sulfolobus islandicus L.D.8.5]
gi|323474599|gb|ADX85205.1| TATA-box binding family protein [Sulfolobus islandicus REY15A]
gi|323477331|gb|ADX82569.1| TATA-box binding family protein [Sulfolobus islandicus HVE10/4]
Length = 181
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 20 VSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQ 79
++TV L+ LDL + N EY+P +F +I R+ +PK TALIF SGKMV TGAKS +
Sbjct: 1 MATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTE 60
Query: 80 QSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPEL 138
+ A ++ + ++K G K +IQNIV S ++ + L+ A+ + YEPE
Sbjct: 61 ELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDKAAFLLEN-NMYEPEQ 119
Query: 139 FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
FPGLI+RM P++VLLIF SGK+VITGAK DE A + I+ L E
Sbjct: 120 FPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAEL 167
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TGA
Sbjct: 88 IQNIVASANLHVNVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 147
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K E + A + RI KL
Sbjct: 148 KREDEVSKAVK---RIFDKLA 165
>gi|449067334|ref|YP_007434416.1| transcription factor [Sulfolobus acidocaldarius N8]
gi|449069604|ref|YP_007436685.1| transcription factor [Sulfolobus acidocaldarius Ron12/I]
gi|449035842|gb|AGE71268.1| transcription factor [Sulfolobus acidocaldarius N8]
gi|449038112|gb|AGE73537.1| transcription factor [Sulfolobus acidocaldarius Ron12/I]
Length = 177
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Query: 23 VNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSK 82
+ LD LDL + N EY+P +F +I R+ PK T+LIF SGKMV TGAKS +
Sbjct: 1 MTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELI 60
Query: 83 LAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPG 141
A ++ + ++K G K +IQNIV S ++ + L+ A+ + YEPE FPG
Sbjct: 61 KAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFLLEN-NMYEPEQFPG 119
Query: 142 LIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
LIYRM +P++VLLIF SGK+VITGAK DE + A + I+ L E
Sbjct: 120 LIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVEL 164
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++L K A N Y P++F +I R+ EP+ LIF+SGKMV TGA
Sbjct: 85 IQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGA 144
Query: 76 KSEQQSKLAARK 87
K E + A +K
Sbjct: 145 KREDEVHKAVKK 156
>gi|407465522|ref|YP_006776404.1| TATA-box binding family protein [Candidatus Nitrosopumilus sp. AR2]
gi|407048710|gb|AFS83462.1| TATA-box binding family protein [Candidatus Nitrosopumilus sp. AR2]
Length = 187
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL +I + + EY+P++F ++ R+ P+T LIF +GKMVC
Sbjct: 7 IVSVENVVASASVDQKIDLIEITEKFPDTEYHPEQFPGLVFRLTNPRTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKL--GFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSH 128
TGAKSE+ +A + ++QKL G KD +QNIV + ++ I LE A +
Sbjct: 67 TGAKSEE---MAIKAVNTVVQKLRKGKIKIKKDAVITVQNIVAAINLGGKIHLEKAARTL 123
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 124 -PRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHALLEE 179
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|14423942|sp|Q9P9I9.1|TBP_METTL RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor;
AltName: Full=aTBP
gi|6723836|emb|CAB66385.1| archaeal transcription factor TBP [Methanothermococcus
thermolithotrophicus]
Length = 181
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ +PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++ +++A +K + ++ G + +QN+V + D+ L+ ++ G + YEP
Sbjct: 69 KEDAEIAIKKIIKELKDAGMDIIDNPEVNVQNMVATADLGIEPNLDDISTLEG--TEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YR+ PK+V+LIF SGK+VITG K +D+ Y A + I L E +
Sbjct: 127 EQFPGLVYRLSDPKVVVLIFGSGKVVITGLKKKDDAYLALDKILSTLKELEE 178
>gi|15897830|ref|NP_342435.1| transcription factor [Sulfolobus solfataricus P2]
gi|284175636|ref|ZP_06389605.1| transcription factor [Sulfolobus solfataricus 98/2]
gi|384434381|ref|YP_005643739.1| TATA-box binding family protein [Sulfolobus solfataricus 98/2]
gi|13814131|gb|AAK41225.1| TATA box binding protein, hypothetical (tfIID) [Sulfolobus
solfataricus P2]
gi|261602535|gb|ACX92138.1| TATA-box binding family protein [Sulfolobus solfataricus 98/2]
Length = 181
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 20 VSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQ 79
++TV L+ LDL + N EY+P +F +I R+ +PK TALIF SGKMV TGAKS +
Sbjct: 1 MATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTE 60
Query: 80 QSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPEL 138
+ A ++ + ++K G K +IQNIV S ++ + L+ A+ + YEPE
Sbjct: 61 ELIKAVKRIIKTLKKYGIKIVGKPKIQIQNIVASANLHVNVNLDKAAFLLEN-NMYEPEQ 119
Query: 139 FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
FPGLI+RM P++VLLIF SGK+VITGAK DE A + I+ L E
Sbjct: 120 FPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAEL 167
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TGA
Sbjct: 88 IQNIVASANLHVNVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 147
Query: 76 KSEQQSKLAARKYARIIQKLG 96
K E + A + RI KL
Sbjct: 148 KREDEVSKAVK---RIFDKLA 165
>gi|345006113|ref|YP_004808966.1| TATA-box-binding protein [halophilic archaeon DL31]
gi|344321739|gb|AEN06593.1| TATA-box-binding protein [halophilic archaeon DL31]
Length = 186
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S++N+V++ + +LDL+ +A+ A+Y+P++F ++ R EPK+ ALIF SGK+VCTG
Sbjct: 9 SIENVVASTGIGLELDLQSVAMDLEGADYDPEQFPGLVYRTEEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++KL P + + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDAVHESLGIVFDELRKLDIPVEDGPEITVQNIVSSADLGESLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+++P +V L+F SGK+VITG K + A + I LT+
Sbjct: 129 EYEPEQFPGLVYRLEEPDVVALLFGSGKLVITGGKTPADAEDAIDVISERLTDL 182
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVSSADLGESLNLNAIAIGLGLENIEYEPEQFPGLVYRLEEPDVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K+ ++ A + + LG
Sbjct: 160 TGGKTPADAEDAIDVISERLTDLGL 184
>gi|399574202|ref|ZP_10767962.1| tata binding protein of transcription factor tfiid [Halogranum
salarium B-1]
gi|399240710|gb|EJN61634.1| tata binding protein of transcription factor tfiid [Halogranum
salarium B-1]
Length = 186
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +A A++NP F ++ R + PK ALIF SGK+VCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQNPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A ++ L P + + +QNIV S D+ + L LA G
Sbjct: 70 KSIDDVHEALDIIFDKLRGLSIPVEEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+ TA E I
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTDDATTAVEQI 175
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQNPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIY 180
TGAK D+ + A + I+
Sbjct: 67 TGAKSIDDVHEALDIIF 83
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + A + I+ LG
Sbjct: 160 TGGKQTDDATTAVEQIVERIENLGL 184
>gi|292494314|ref|YP_003533457.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|448289408|ref|ZP_21480579.1| transcription factor [Haloferax volcanii DS2]
gi|291369097|gb|ADE01327.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|445582489|gb|ELY36830.1| transcription factor [Haloferax volcanii DS2]
Length = 188
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A +LG P D +QNIV S D+ + L LA G +
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGKIVITG K + TA E +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGVKRVGDAETALETV 177
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPVELDLERLSLDMNG-TDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGA D+ TA E ++ TE
Sbjct: 69 TGADSVDDVSTAIETLFDEFTEL 91
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A +++LG
Sbjct: 162 TGVKRVGDAETALETVDDDVRELGL 186
>gi|310752315|gb|ADP09476.1| TATA-box binding protein [uncultured marine crenarchaeote E48-1C]
Length = 186
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV ++N+V++ L+ K+DL + EY P++F ++ R++ PKT LIF SGKMV
Sbjct: 6 AVIKIENVVASATLNQKVDLNAVVKSYPIVEYRPEQFPGLVFRLKRPKTATLIFNSGKMV 65
Query: 72 CTGAKSEQQSKLAARKYAR-IIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
CTGAKSE++++ A +K + + + + KIQNIV S ++ I LE S
Sbjct: 66 CTGAKSEKEARRAVKKVIKELKKGGIIIIGKPELKIQNIVASANLGGMIDLEASTLSLKK 125
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ YEPE FPGLIYRM +PK+V+L+F SGK+V TGAK Y A
Sbjct: 126 -TMYEPEQFPGLIYRMAEPKVVILLFASGKLVCTGAKREQNVYDA 169
>gi|340345517|ref|ZP_08668649.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520658|gb|EGP94381.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 187
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ +++ K+DL +I + + EY+P++F ++ R++ P+T LIF +GKMVC
Sbjct: 7 IVSVENVVASASVEQKIDLNEITEKFPDTEYHPEQFPGLVFRLQNPRTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSH 128
TGAKSE +A + ++QKL K K+ +QNIV + ++ I LE A +
Sbjct: 67 TGAKSED---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKAARTL 123
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 124 -PRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSLLEE 179
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|424811982|ref|ZP_18237222.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalinarum sp. J07AB56]
gi|339756204|gb|EGQ39787.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalinarum sp. J07AB56]
Length = 187
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ LD ++ L +IA+ N EY P++F ++ R+ EPK AL+F SGK+VCTG
Sbjct: 14 IENVVASTTLDRRMPLDRIAIYLENTEYEPEQFPGLVYRLDEPKAAALLFGSGKVVCTGT 73
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+S Q+K A K +++ K D +QN+V S ++ + L +A+ + Y
Sbjct: 74 QSPTQAKEAVHKIIDELREADIEIGKKPDITVQNMVASSELDATLNLNRIAFEL-VGTEY 132
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE FPGL+YR+ +PK+V L+F SG+IV TG K D+ E + L E
Sbjct: 133 EPEQFPGLVYRLDEPKVVFLLFSSGRIVCTGGKTYDDVENGIEKLKENLKEL 184
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ LD L+L +IA + EY P++F ++ R+ EPK L+F+SG++VCTG
Sbjct: 104 TVQNMVASSELDATLNLNRIAFELVGTEYEPEQFPGLVYRLDEPKVVFLLFSSGRIVCTG 163
Query: 75 AKSEQQSKLAARKYARIIQKLG 96
K+ + K +++LG
Sbjct: 164 GKTYDDVENGIEKLKENLKELG 185
>gi|84489891|ref|YP_448123.1| transcription factor [Methanosphaera stadtmanae DSM 3091]
gi|121731087|sp|Q2NFC3.1|TBP_METST RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|84373210|gb|ABC57480.1| TATA-box binding protein [Methanosphaera stadtmanae DSM 3091]
Length = 183
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 4/178 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ L L+L KIA N EYN ++F ++ ++++PKT ALIF SGK+VCTGA
Sbjct: 8 VENIVASATLGKSLELPKIAPALENVEYNLEQFPGLVFKLKDPKTAALIFGSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLG--FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
K + S A I++L P +F + KIQNIV S ++ + LE +A +
Sbjct: 68 KCIEDSIKAIHMTVDKIRELDTEIPEEF-EIKIQNIVASANLGKVLNLEAVALDL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
YEPE FPGL+YR+ PK+VLL+F SGK+V TGAK D+ + L E +++
Sbjct: 126 YEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTADQALLGVQKTKERLIELYLIEE 183
>gi|448568567|ref|ZP_21638101.1| transcription factor [Haloferax lucentense DSM 14919]
gi|445725917|gb|ELZ77535.1| transcription factor [Haloferax lucentense DSM 14919]
Length = 188
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A +LG P D +QNIV S D+ + L LA G +
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK + A E +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVGDAEAALETV 177
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPVELDLERLSLDMNG-TDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGA D+ TA E ++ TE
Sbjct: 69 TGADSVDDVSTAIETLFDEFTEL 91
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A +++LG
Sbjct: 162 TGAKRVGDAEAALETVDDDVRELGL 186
>gi|386874609|ref|ZP_10116844.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
gi|386807582|gb|EIJ66966.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
Length = 187
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 111/177 (62%), Gaps = 8/177 (4%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ SV+N+V++ ++D K+DL I + + EY+P++F ++ R+ P+T LIF +GKMVC
Sbjct: 7 IVSVENVVASASVDQKIDLITITEKFPDTEYHPEQFPGLVFRLTNPRTATLIFRTGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSH 128
TGAKSE+ +A + ++QKL K K+ +QNIV + ++ I LE A +
Sbjct: 67 TGAKSEE---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKAARTL 123
Query: 129 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+L+F SGK+V TGAK + Y + N++ +L E
Sbjct: 124 -PRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHALLEE 179
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV +V+NIV+ +NL K+ L+K A + Y P++F +I R+ +PKT L+FASGK+V
Sbjct: 97 AVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLV 156
Query: 72 CTGAKSE 78
CTGAK E
Sbjct: 157 CTGAKKE 163
>gi|340344813|ref|ZP_08667945.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519954|gb|EGP93677.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 186
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ N+V++ +D KLDL I + + EY+P++F + R++ PKT L+F+SGKMVCTG
Sbjct: 9 AIVNVVASATIDQKLDLVDITKKFPDVEYHPEQFPGAVFRLKNPKTATLLFSSGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
AKS++ ++ A K I++K K IQNIV S ++ + LE A + S
Sbjct: 69 AKSQELAEDAVSKVVEILRKGKIKIKNDATVTIQNIVSSINLGGRVNLEQAARTL-PRSM 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+RM PK V+LIF SGK+V GAK+ + + + I+ +L E
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILIFASGKLVCVGAKLEKDIHRSVHQIHSMLEE 179
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
A +++NIVS++NL +++L++ A + Y P++F +I R+ +PKT LIFASGK+V
Sbjct: 97 ATVTIQNIVSSINLGGRVNLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILIFASGKLV 156
Query: 72 CTGAKSEQQ 80
C GAK E+
Sbjct: 157 CVGAKLEKD 165
>gi|433425962|ref|ZP_20406798.1| transcription factor [Haloferax sp. BAB2207]
gi|448594544|ref|ZP_21652891.1| transcription factor [Haloferax alexandrinus JCM 10717]
gi|432197431|gb|ELK53812.1| transcription factor [Haloferax sp. BAB2207]
gi|445744180|gb|ELZ95659.1| transcription factor [Haloferax alexandrinus JCM 10717]
Length = 188
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A +LG P D +QNIV S D+ + L LA G +
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDVTVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK + A E +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVGDAEAALETV 177
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPVELDLERLSLDMNG-TDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGA D+ TA E ++ TE
Sbjct: 69 TGADSVDDVSTAIETLFDEFTEL 91
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A +++LG
Sbjct: 162 TGAKRVGDAEAALETVDDDVRELGL 186
>gi|289193261|ref|YP_003459202.1| TATA-box binding family protein [Methanocaldococcus sp. FS406-22]
gi|288939711|gb|ADC70466.1| TATA-box binding family protein [Methanocaldococcus sp. FS406-22]
Length = 180
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+++A+ NAEY P++F ++ R+ PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + +++ G + D KIQN+V + D+ L+ +A + YEP
Sbjct: 69 KEEAEIAIKKVIKELKEAGMDVIENPDIKIQNMVATADLGIEPNLDDIALMVEG-TEYEP 127
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A + I + E +++
Sbjct: 128 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEVQEL 180
>gi|433593266|ref|YP_007282752.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|433308304|gb|AGB34114.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
Length = 194
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +L+L+ +A ++EYNP F ++ RI++P L+F SGK+VCTGA
Sbjct: 10 IENVVASTGVGQELNLEALADDLPHSEYNPGNFPGMVHRIQDPNAVTLLFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
+S A + ++ LG + + IQNIV S D+ I L +A G +
Sbjct: 70 QSTADVTDALNILFQDLRDLGIDVVDQPEITIQNIVSSGDLGEQIDLNAIAIGLGLEHTE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V+L+F SGK+VITGAK RD +A E ++ L E
Sbjct: 130 YEPEQFPGLVYRLTSPPVVVLLFGSGKLVITGAKTRDNAQSALETVHSRLREL 182
>gi|110668436|ref|YP_658247.1| transcription factor [Haloquadratum walsbyi DSM 16790]
gi|385803899|ref|YP_005840299.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
gi|109626183|emb|CAJ52639.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
DSM 16790]
gi|339729391|emb|CCC40639.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
Length = 186
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +A A++NP F ++ R +EPK ALIF SGK+VCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A ++ L P + +QNIV S D+ + L LA G
Sbjct: 70 KSINDVHDALGIIFEKLRGLSIPVDEDPEITVQNIVSSADLGHTLNLNALAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM QP++V+L+F SGKIVITG K ++ A E I
Sbjct: 130 YEPEQFPGLVYRMDQPEVVILLFGSGKIVITGGKQTNDAAAAVEEI 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 99 AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
A +IQN+V S + + LE LA + + P+ FPGL+YR ++PK LIF S
Sbjct: 3 APADSIEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQEPKAAALIFRS 61
Query: 159 GKIVITGAKVRDETYTAFENIY 180
GKIV TGAK ++ + A I+
Sbjct: 62 GKIVCTGAKSINDVHDALGIIF 83
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ +P+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHTLNLNALAIGLGLEDVEYEPEQFPGLVYRMDQPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + A + I+ LG
Sbjct: 160 TGGKQTNDAAAAVEEIVERIEDLGL 184
>gi|448591939|ref|ZP_21651314.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445733228|gb|ELZ84803.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 188
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ ++ +LDLK ++L EYNP F ++ R +PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTGIEQELDLKSLSLDMAGTEYNPDNFPGLVYRTSDPKSACLVFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S + A + LG P + + +QNIV S D++ + L LA G
Sbjct: 72 DSVEGVHAALDILFEELSDLGIPLPDEPEITVQNIVSSADLRSNLNLNALAIGLGLEDVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPE FPGL+YR+++P +V+L+F SGK+VITGAK E A E I V E +K+
Sbjct: 132 YEPEQFPGLVYRLEEPSVVVLMFGSGKVVITGAK---EVAQAEEAIKVVRDEVQKL 184
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLRSNLNLNALAIGLGLEDVEYEPEQFPGLVYRLEEPSVVVLMFGSGKVVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK Q++ A + +QKLG
Sbjct: 162 TGAKEVAQAEEAIKVVRDEVQKLGL 186
>gi|448736860|ref|ZP_21718941.1| transcription factor [Halococcus thailandensis JCM 13552]
gi|445805544|gb|EMA55752.1| transcription factor [Halococcus thailandensis JCM 13552]
Length = 203
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 1/176 (0%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
A V+N+V + L+ ++DLK +AL A+++P++F VI R + T LIF SGK+
Sbjct: 24 ATLEVQNVVVSSTLNQEIDLKSVALDLTGADFDPEQFPGVIYRPESAEATCLIFRSGKIT 83
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
CTGA S + ++ + ++ LG + +QNIV D+ + LE +A G
Sbjct: 84 CTGAGSIEGARETVQATVETVRGLGIDVEEPTVTVQNIVSDADLGEELNLEAIAIGLGLE 143
Query: 132 S-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGLIYR+ +P V+L+F +GK VITGA+ +D+ A + I L+E
Sbjct: 144 DIEYEPEQFPGLIYRLDEPDTVVLLFGTGKTVITGAETQDDAEEALKTIIDRLSEL 199
>gi|325959799|ref|YP_004291265.1| TATA-box-binding protein [Methanobacterium sp. AL-21]
gi|325331231|gb|ADZ10293.1| TATA-box-binding protein [Methanobacterium sp. AL-21]
Length = 181
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ L LDL ++A EYN ++F ++ +++EPKT ALIF SGK+VCTGA
Sbjct: 8 VENIVASAALGKSLDLPQVAPALEGVEYNSEQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLG--FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + SK A ++ L P +F + KIQNIV S ++ + LE +A +
Sbjct: 68 KSIEDSKKAIHIAVDKMRALDTEIPHEF-EIKIQNIVASANLGKTLNLESVALDL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+VLL+F SGK+V TGAK ++ E L E
Sbjct: 126 YEPEQFPGLVYRLDDPKVVLLLFGSGKVVCTGAKSFEDAQLGVEKTKERLAEL 178
>gi|407462989|ref|YP_006774306.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046611|gb|AFS81364.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 192
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
AV ++ N+V++ ++ KLDL I + + EY+P++F + R++EPKT L+F SG MV
Sbjct: 6 AVIAIVNVVASATIEQKLDLVDITKKFPHVEYHPEQFPGAVFRLQEPKTATLLFGSGNMV 65
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
CTGAKSE+ + A R ++K K + IQNIV S ++ + LE A +
Sbjct: 66 CTGAKSEEMAIQAVNTVVRKLRKGRIKIKKEPKVTIQNIVSSINLGGKVNLEQAARTL-P 124
Query: 131 FSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+LIF SGK+V GAK+ E + + I+ +L E
Sbjct: 125 RSMYEPEQFPGLIHRMLDPKTVILIFASGKLVCVGAKLEKEIHRSVNQIHSLLEE 179
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 106 IQNIVGSCDVKFPIRLEGLA--YSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
I N+V S ++ + L + + H Y PE FPG ++R+++PK L+F SG +V
Sbjct: 10 IVNVVASATIEQKLDLVDITKKFPH---VEYHPEQFPGAVFRLQEPKTATLLFGSGNMVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEFRK 188
TGAK + A + + V+ + RK
Sbjct: 67 TGAKSEE---MAIQAVNTVVRKLRK 88
>gi|126179334|ref|YP_001047299.1| transcription factor [Methanoculleus marisnigri JR1]
gi|125862128|gb|ABN57317.1| TATA binding protein of transcription factor TFIID [Methanoculleus
marisnigri JR1]
Length = 187
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL +A + ++AEYN KRF V++R+++PK AL+F SGK+V TGA
Sbjct: 12 IENIVASAKVTDSLDLPSLASRLKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + A ++ L + ++KIQNIV S D+ PI L +A
Sbjct: 72 KSIDNLSRGLQILADQLRALDIDIPENPEYKIQNIVTSADLGTPINLNKIAVGFNLDKIE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+V+L+F SGK++ITG KV ++ A + I L+
Sbjct: 132 YEPEQFPGLVYRLDDPKVVVLLFGSGKLIITGGKVPEDAQRAVKRILSELSSL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++NIV++ +L ++L KIA+ EY P++F ++ R+ +PK L+F SGK++ T
Sbjct: 103 IQNIVTSADLGTPINLNKIAVGFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIIT 162
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A ++ + LG
Sbjct: 163 GGKVPEDAQRAVKRILSELSSLGL 186
>gi|448567600|ref|ZP_21637525.1| transcription factor [Haloferax prahovense DSM 18310]
gi|445711598|gb|ELZ63388.1| transcription factor [Haloferax prahovense DSM 18310]
Length = 188
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R+PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A LG P + D +QNIV S D+ + L LA G +
Sbjct: 72 DSVDDVSTAIETLFDEFTDLGVPVPEDADITVQNIVSSADLGEALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAK 165
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGKIV
Sbjct: 10 IEIQNVVASTEVPVELDLERLSLDMDG-TDYDPENFPGLVYRTRDPKSACLVFRSGKIVC 68
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGA D+ TA E ++ T+
Sbjct: 69 TGADSVDDVSTAIETLFDEFTDL 91
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGEALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A + +++LG
Sbjct: 162 TGAKRTADAEAALKTVDEDVRELGL 186
>gi|410722027|ref|ZP_11361343.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanobacterium sp. Maddingley MBC34]
gi|410597924|gb|EKQ52528.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanobacterium sp. Maddingley MBC34]
Length = 181
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ + LDL ++A EYN ++F ++ +I+EPKT ALIF SGK+VCTGA
Sbjct: 8 VENIVTSATIGKDLDLPQVAPALEGVEYNLEQFPGLVYKIKEPKTAALIFGSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLG--FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + SK A ++ L P ++ + K+QNIV S +++ + LE +A +
Sbjct: 68 KSIENSKKAIHIAVDKMRTLDPEIPHEY-EMKVQNIVASANLEKTLNLEAVALDL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +PK+VLL+F SGK+V TGAK + E L+E
Sbjct: 126 YEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGAKTIADAQLGVEKTKERLSEL 178
>gi|448621885|ref|ZP_21668634.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445754915|gb|EMA06309.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 188
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R+PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPLELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A LG P + D +QNIV S D+ + L LA G +
Sbjct: 72 NSVGDVSTAIETLFGEFADLGVPIPDEPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK + A E +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKQVADAEAALETV 177
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGKIV
Sbjct: 10 IEIQNVVASTEVPLELDLERLSLDMDG-TDYDPENFPGLVYRTRDPKSACLVFRSGKIVC 68
Query: 164 TGAKVRDETYTAFENIY 180
TGA + TA E ++
Sbjct: 69 TGANSVGDVSTAIETLF 85
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A +++LG
Sbjct: 162 TGAKQVADAEAALETVDEDVRELGL 186
>gi|296241961|ref|YP_003649448.1| TATA binding protein of transcription factor TFIID [Thermosphaera
aggregans DSM 11486]
gi|296094545|gb|ADG90496.1| TATA binding protein of transcription factor TFIID [Thermosphaera
aggregans DSM 11486]
Length = 193
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV+TV L+ +LDL+ I + Y P +F +I R+ +PKTTALIF SGKMV TGA
Sbjct: 13 IENIVATVILEHELDLELIETRIPAITYKPDQFPGLIFRLDKPKTTALIFKSGKMVVTGA 72
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS QQ A ++ +++ K K +IQNIV S D+ + LE AY S Y
Sbjct: 73 KSTQQLIEAVKRMIKVLLKYDIKVTGKPRIQIQNIVASGDIGAYVHLEKAAYLL-EDSMY 131
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
EPE FPGLI+RM+ P++VLLIF SGK+VITGAK E A NI L E
Sbjct: 132 EPEQFPGLIHRMRSPRVVLLIFSSGKMVITGAKEEVEVEKAVVNIGNQLLEL 183
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+KI+NIV + ++ + LE + A + Y+P+ FPGLI+R+ +PK LIF SGK+V+
Sbjct: 11 YKIENIVATVILEHELDLELIETRIPAIT-YKPDQFPGLIFRLDKPKTTALIFKSGKMVV 69
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGAK + A + + VL ++
Sbjct: 70 TGAKSTQQLIEAVKRMIKVLLKY 92
>gi|157057845|gb|ABV02910.1| TATA box binding protein [Phodopus sungorus]
Length = 68
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 67/68 (98%)
Query: 43 YNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFK 102
YNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAKSE+QS+LAARKYAR++QKLGFPAKF
Sbjct: 1 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFL 60
Query: 103 DFKIQNIV 110
DFKIQN+V
Sbjct: 61 DFKIQNMV 68
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
Y P+ F +I R+++P+ LIF SGK+V TGAK +++ A
Sbjct: 1 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLA 42
>gi|56755940|gb|AAW26148.1| SJCHGC04294 protein [Schistosoma japonicum]
Length = 99
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 69/80 (86%)
Query: 109 IVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKV 168
+VGSCDV+F IRLEGL S G F++YEPELFPGLIYRM +PKIVLL+FVSGKIV+TGAKV
Sbjct: 1 MVGSCDVRFHIRLEGLVLSQGQFATYEPELFPGLIYRMTKPKIVLLVFVSGKIVLTGAKV 60
Query: 169 RDETYTAFENIYPVLTEFRK 188
R+E Y AF NIYP+L F+K
Sbjct: 61 REEIYEAFNNIYPILKNFKK 80
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 19 IVSTVNLDCKLDLKKIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
+V + ++ + L+ + L Q + A Y P+ F +I R+ +PK L+F SGK+V TGAK
Sbjct: 1 MVGSCDVRFHIRLEGLVLSQGQFATYEPELFPGLIYRMTKPKIVLLVFVSGKIVLTGAKV 60
Query: 78 EQQ 80
++
Sbjct: 61 REE 63
>gi|435846586|ref|YP_007308836.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
gi|433672854|gb|AGB37046.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
Length = 185
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + + DL+ +A NA+Y+PK F ++ RI EPK+ LIF +GK+VCTG
Sbjct: 9 TIENVVASGDTGREFDLQTLAEDLDNAQYDPKTFPGIVYRIDEPKSAGLIFHTGKVVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
+KS + + ++LG + F +QNIV S D+ + + L +A G
Sbjct: 69 SKSVEDINKSVESIFNAFERLGISIEENPFTVQNIVSSADLGYSLNLNAVAVGLGLGQIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGA-KVRDET 172
YEPE FPGL+YR+ +P +V L+F SGK VITG +V+D T
Sbjct: 129 YEPEQFPGLVYRLDEPDVVALLFGSGKTVITGGTEVQDAT 168
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP AL+F SGK V
Sbjct: 99 TVQNIVSSADLGYSLNLNAVAVGLGLGQIEYEPEQFPGLVYRLDEPDVVALLFGSGKTVI 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG Q + A A ++ LG
Sbjct: 159 TGGTEVQDATNAVNVIASKLEDLGL 183
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
I+N+V S D L+ LA + Y+P+ FPG++YR+ +PK LIF +GK+V TG
Sbjct: 10 IENVVASGDTGREFDLQTLAEDLDN-AQYDPKTFPGIVYRIDEPKSAGLIFHTGKVVCTG 68
Query: 166 AKVRDETYTAFENIY 180
+K ++ + E+I+
Sbjct: 69 SKSVEDINKSVESIF 83
>gi|149032877|gb|EDL87732.1| rCG41948, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Query: 27 CKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAAR 86
C L+L+KIAL+ N Y + V+M++R+P+ TA I++SGK++CTGA SE+++K AR
Sbjct: 44 CHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGAR 102
Query: 87 KYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRM 146
+ AR +QKLGF F DFK+ N++ C++ F IRL ++ +SYEPEL P + YR+
Sbjct: 103 RLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRI 162
Query: 147 KQPKIVLLIFVSGKIVIT 164
K + L IF +G I +T
Sbjct: 163 KSLRATLQIFSTGSITVT 180
>gi|313126218|ref|YP_004036488.1| tata binding protein of transcription factor tfiid [Halogeometricum
borinquense DSM 11551]
gi|448286060|ref|ZP_21477295.1| transcription factor [Halogeometricum borinquense DSM 11551]
gi|312292583|gb|ADQ67043.1| TATA binding protein of transcription factor TFIID [Halogeometricum
borinquense DSM 11551]
gi|445575111|gb|ELY29590.1| transcription factor [Halogeometricum borinquense DSM 11551]
Length = 186
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A ++ L P + +QNIV S D+ + L LA G
Sbjct: 70 KSIDDVHEALGIIFDKLRGLSIPVDEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +P++V+L+F SGKIVITG K ++ TA E I
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTNDAETAVEEI 175
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + + I LG
Sbjct: 160 TGGKQTNDAETAVEEIVKRIDNLGL 184
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 99 AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
A +IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF S
Sbjct: 3 APADSIEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRS 61
Query: 159 GKIVITGAKVRDETYTAFENIY 180
GKIV TGAK D+ + A I+
Sbjct: 62 GKIVCTGAKSIDDVHEALGIIF 83
>gi|448576731|ref|ZP_21642607.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445728919|gb|ELZ80519.1| transcription factor [Haloferax larsenii JCM 13917]
Length = 188
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ ++ +LDLK ++L EYNP F ++ R +PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTGIEQELDLKSLSLDMAGTEYNPDNFPGLVYRTSDPKSACLVFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S + A + LG P + + +QNIV S D++ + L LA G
Sbjct: 72 DSVEGVHAALDILFEELSDLGIPLPDEPEITVQNIVSSADLRSNLNLNALAIGLGLEDVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPE FPGL+YR+++P +V+L+F SGK+VITGAK E A + I V E +K+
Sbjct: 132 YEPEQFPGLVYRLEEPSVVVLMFGSGKVVITGAK---EVAQAEQAIEVVRDEVQKL 184
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLRSNLNLNALAIGLGLEDVEYEPEQFPGLVYRLEEPSVVVLMFGSGKVVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK Q++ A +QKLG
Sbjct: 162 TGAKEVAQAEQAIEVVRDEVQKLGL 186
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ +IQN+V S ++ + L+ L+ A + Y P+ FPGL+YR PK L+F SGKI
Sbjct: 8 ESIEIQNVVASTGIEQELDLKSLSLDM-AGTEYNPDNFPGLVYRTSDPKSACLVFRSGKI 66
Query: 162 VITGAKVRDETYTAFENIYPVLTEF 186
V TGA + + A + ++ L++
Sbjct: 67 VCTGADSVEGVHAALDILFEELSDL 91
>gi|448603976|ref|ZP_21657400.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|445744772|gb|ELZ96244.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
Length = 188
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R+PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPLELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A LG P + D +QNIV S D+ + L LA G +
Sbjct: 72 NSVGDVSTAIETLFGEFADLGVPIPDEPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK + A E +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVADAEAALETV 177
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGKIV
Sbjct: 10 IEIQNVVASTEVPLELDLERLSLDMDG-TDYDPENFPGLVYRTRDPKSACLVFRSGKIVC 68
Query: 164 TGAKVRDETYTAFENIY 180
TGA + TA E ++
Sbjct: 69 TGANSVGDVSTAIETLF 85
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A +++LG
Sbjct: 162 TGAKRVADAEAALETVDEDVRELGL 186
>gi|333986797|ref|YP_004519404.1| TATA-box-binding protein [Methanobacterium sp. SWAN-1]
gi|333824941|gb|AEG17603.1| TATA-box-binding protein [Methanobacterium sp. SWAN-1]
Length = 184
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ L L+L K+A EYN ++F ++ +++EPKT ALIF SGK+VCTGA
Sbjct: 11 VENIVASATLGKSLELPKVAPALEGVEYNVEQFPGLVYKLKEPKTAALIFGSGKLVCTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + S A ++ L P +F + KIQNIV S ++ + LE +A +
Sbjct: 71 KSIENSIKAIHIAVDKMRSLDPDIPHEF-EIKIQNIVASANLMSTLNLEAVAMDL-ENTE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +PK+VLL+F SGK+V TGAK +++ E L E
Sbjct: 129 YEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGAKSKEDAQLGVEKTKERLIEL 181
>gi|448581629|ref|ZP_21645410.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|445733392|gb|ELZ84962.1| transcription factor [Haloferax gibbonsii ATCC 33959]
Length = 188
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL++++L +Y+P+ F ++ R R+PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKVVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A LG P + D +QNIV S D+ + L LA G
Sbjct: 72 DSVDDVGTAIETLFDEFTDLGVPVPEDADITVQNIVSSADLGAALNLNALAIGLGLEDVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V+L+F SGK+VITGAK + A + +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKVVITGAKRTTDAEAALKTV 177
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S +V + LE L+ + Y+PE FPGL+YR + PK L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPVELDLERLSLDMDG-TDYDPENFPGLVYRTRDPKSACLVFRSGKVVC 68
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGA D+ TA E ++ T+
Sbjct: 69 TGADSVDDVGTAIETLFDEFTDL 91
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TVQNIVSSADLGAALNLNALAIGLGLEDVEYEPEQFPGLVYRLDEPSVVVLMFGSGKVVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A + +++LG
Sbjct: 162 TGAKRTTDAEAALKTVDEDVRELGL 186
>gi|374636062|ref|ZP_09707646.1| TATA-box binding family protein [Methanotorris formicicus Mc-S-70]
gi|373560320|gb|EHP86587.1| TATA-box binding family protein [Methanotorris formicicus Mc-S-70]
Length = 188
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL++ AL NAEY P++F ++ R+ EPK LIF SGK+ CTGAKS
Sbjct: 16 NVVVSTQIGSDIDLEEAALILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGKVNCTGAKS 75
Query: 78 EQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + ++ G + K+QN+V + D+ L+ +A + YEP
Sbjct: 76 KEEAEVAIKKIIKELKDAGMDIIDDPEVKVQNMVATADLGIEPNLDDIALMIEG-TEYEP 134
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
E FPGL+YR+ PK+V+LIF SGK+VITG K + A I L E +++
Sbjct: 135 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKKEGDAEIALNKILETLREIEEIK 188
>gi|198429838|ref|XP_002128047.1| PREDICTED: similar to TBP-like factor [Ciona intestinalis]
Length = 471
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
SV N+VS+ + C L+L++IAL+ + Y + V+MR+R PK TA +++SGK+VCTG
Sbjct: 277 SVCNVVSSFRVHCHLNLRQIALEGMDVVYR-RETQKVVMRMRNPKCTAYMWSSGKIVCTG 335
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH-GAFSS 133
+ S Q ++ +A+++AR + K+GF KF +F++ N++ C + + I + A ++ G S
Sbjct: 336 SSSAQYARQSAKRFARRLLKIGFKVKFAEFRVVNVLAVCKMPYAIDINEFAKANRGRHCS 395
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
YEPEL PG+ +R K L IF +G + +T V ++ A +YP+ EF + ++
Sbjct: 396 YEPELHPGVTFRESTTKATLKIFSTGSVTVTARSV-EKAKNAIRTVYPMFQEFYRFEK 452
>gi|408381757|ref|ZP_11179305.1| transcription factor [Methanobacterium formicicum DSM 3637]
gi|407815688|gb|EKF86258.1| transcription factor [Methanobacterium formicicum DSM 3637]
Length = 181
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+NIV++ L +DL ++A EYN ++F ++ +++EPKT ALIF SGK+VCTGA
Sbjct: 8 VENIVASATLGKSVDLPQVAPALEGVEYNLEQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + SK A ++ L P +F + K+QNIV S ++ + LE +A +
Sbjct: 68 KSIENSKKAIHIAVDKMRTLDPDIPHEF-EIKVQNIVASANLDKTLNLEAVALDL-ENTE 125
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+VLL+F SGK+V TGAK + E L+E
Sbjct: 126 YEPEQFPGLVYRLGDPKVVLLLFGSGKVVCTGAKTISDAQLGVEKTKERLSEL 178
>gi|147920361|ref|YP_685866.1| transcription factor [Methanocella arvoryzae MRE50]
gi|110621262|emb|CAJ36540.1| TATA-box binding protein E [Methanocella arvoryzae MRE50]
Length = 188
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 104/167 (62%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + ++DLK + L A+Y+P++F ++ R ++PKT ALIF SGK+VCTG
Sbjct: 12 TIENVVASTAIGQEIDLKSVTLALDGADYDPEQFPGLVYRTKDPKTAALIFRSGKIVCTG 71
Query: 75 AKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +K + + +G A + +QNIV S D+ + L +A G +
Sbjct: 72 AKSIEDVDRGLKKVFKKMDSVGIKVADNPEITVQNIVASADLGSVLNLNAIAIGLGLENI 131
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ QPK+V+L+F SGK+V+TG K + A + I
Sbjct: 132 EYEPEQFPGLVYRIDQPKVVVLLFGSGKLVVTGGKKPKDAEEAVDRI 178
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ RI +PK L+F SGK+V
Sbjct: 103 TVQNIVASADLGSVLNLNAIAIGLGLENIEYEPEQFPGLVYRIDQPKVVVLLFGSGKLVV 162
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + ++ A + R ++ L
Sbjct: 163 TGGKKPKDAEEAVDRIVRELEGLAL 187
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
K I+N+V S + I L+ + + + Y+PE FPGL+YR K PK LIF SGKI
Sbjct: 9 KTITIENVVASTAIGQEIDLKSVTLALDG-ADYDPEQFPGLVYRTKDPKTAALIFRSGKI 67
Query: 162 VITGAKVRDETYTAFENIY 180
V TGAK ++ + ++
Sbjct: 68 VCTGAKSIEDVDRGLKKVF 86
>gi|389847604|ref|YP_006349843.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448617457|ref|ZP_21666044.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388244910|gb|AFK19856.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445748377|gb|ELZ99824.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 188
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +++ A+Y+P F ++ R +EPK +LIF SGK+VCTGA
Sbjct: 12 IQNVVASTAVGQELDLESLSMDLVGADYDPDNFPGLVYRTQEPKAASLIFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A + + KLG P + + + IQNIV S D+ + L LA G
Sbjct: 72 SSVDDVDRALEQVFGELSKLGIPTEDREEATIQNIVSSADLGTTLNLNALAIGLGLEDVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK
Sbjct: 132 YEPEQFPGLVYRIDEPSVVVLMFGSGKIVITGAK 165
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 95 LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLL 154
+ A+ + +IQN+V S V + LE L+ + Y+P+ FPGL+YR ++PK L
Sbjct: 1 MSHEARLESLEIQNVVASTAVGQELDLESLSMDL-VGADYDPDNFPGLVYRTQEPKAASL 59
Query: 155 IFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
IF SGKIV TGA D+ A E ++ L++
Sbjct: 60 IFRSGKIVCTGASSVDDVDRALEQVFGELSKL 91
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++++NIVS+ +L L+L +A L + EY P++F ++ RI EP L+F SGK+V
Sbjct: 101 ATIQNIVSSADLGTTLNLNALAIGLGLEDVEYEPEQFPGLVYRIDEPSVVVLMFGSGKIV 160
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + ++ A I LG
Sbjct: 161 ITGAKQVEHAREAINVVTDEIDSLGL 186
>gi|429193145|ref|YP_007178823.1| TATA-box binding protein [Natronobacterium gregoryi SP2]
gi|448327012|ref|ZP_21516352.1| transcription factor [Natronobacterium gregoryi SP2]
gi|429137363|gb|AFZ74374.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronobacterium gregoryi SP2]
gi|445609541|gb|ELY63341.1| transcription factor [Natronobacterium gregoryi SP2]
Length = 185
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 1/173 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL +A+ EY+P+ F + RI +PK L+F SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLGPVAMDLEGVEYDPELFPGAVYRIDDPKAALLLFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
AKS + A ++ L P + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDMRRAVEIVFEKLRDLSIPVEPDGVTVQNIVSSADLGHHLNLNAIAIGLGLENIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +VLL+F SGKIVITG + D+ A + L E
Sbjct: 129 YEPEQFPGLVYRIDDPDVVLLLFGSGKIVITGGEQPDDAEQAVGQVRNRLGEL 181
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L IA L N EY P++F ++ RI +P L+F SGK+V
Sbjct: 99 TVQNIVSSADLGHHLNLNAIAIGLGLENIEYEPEQFPGLVYRIDDPDVVLLLFGSGKIVI 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG + ++ A + + +LG
Sbjct: 159 TGGEQPDDAEQAVGQVRNRLGELGL 183
>gi|333910819|ref|YP_004484552.1| TATA-box-binding protein [Methanotorris igneus Kol 5]
gi|333751408|gb|AEF96487.1| TATA-box-binding protein [Methanotorris igneus Kol 5]
Length = 181
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL++ AL NAEY P++F ++ R+ +PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTQIGSDIDLEEAALILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGKVNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + ++ G + K+QN+V + D+ L+ +A + YEP
Sbjct: 69 KEEAEVAIKKIIKELKDAGMDIIDNPEVKVQNMVATADLGIEPNLDDIALMIEG-TEYEP 127
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A I L E ++
Sbjct: 128 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKREEDAEIALNKILETLREIEEI 180
>gi|307352931|ref|YP_003893982.1| TATA-box binding family protein [Methanoplanus petrolearius DSM
11571]
gi|307156164|gb|ADN35544.1| TATA-box binding family protein [Methanoplanus petrolearius DSM
11571]
Length = 186
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 109/176 (61%), Gaps = 8/176 (4%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + +LDL+ I + ++AEYN KRF V++R++EPK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVAKELDLQMINEKIKDAEYNKKRFPGVVLRMQEPKIAALVFGSGKVVLTGA 70
Query: 76 KS-EQQSK---LAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
KS + SK + K + KL P ++K+QNIV S D+ PI L +A
Sbjct: 71 KSIDSLSKGLDILGDKLREL--KLDIPKNL-EYKVQNIVTSADLGTPINLNKIAVGFNLE 127
Query: 132 S-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +PK+V+L+F SGK++ITG K ++ A + I L+
Sbjct: 128 RIEYEPEQFPGLVYRLDEPKVVVLLFGSGKLIITGGKQPEDAKKAVQKILSDLSNL 183
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L ++L KIA+ EY P++F ++ R+ EPK L+F SGK++ T
Sbjct: 102 VQNIVTSADLGTPINLNKIAVGFNLERIEYEPEQFPGLVYRLDEPKVVVLLFGSGKLIIT 161
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + +K A +K + LG
Sbjct: 162 GGKQPEDAKKAVQKILSDLSNLGL 185
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
KI+NIV S V + L+ + + Y + FPG++ RM++PKI L+F SGK+V+
Sbjct: 9 LKIENIVASAKVAKELDLQ-MINEKIKDAEYNKKRFPGVVLRMQEPKIAALVFGSGKVVL 67
Query: 164 TGAKVRDETYTAFENIYPVLTEFR 187
TGAK D + + L E +
Sbjct: 68 TGAKSIDSLSKGLDILGDKLRELK 91
>gi|118358642|ref|XP_001012562.1| TATA-box binding protein [Tetrahymena thermophila]
gi|89294329|gb|EAR92317.1| TATA-box binding protein [Tetrahymena thermophila SB210]
Length = 231
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 106/173 (61%), Gaps = 14/173 (8%)
Query: 29 LDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKY 88
DL++IA + RN +YNPKRF AV MRI++PK T LI++SG M G +S +S+ AA +
Sbjct: 39 FDLQEIAQKCRNTQYNPKRFPAVFMRIKDPKATGLIYSSGNMTIVGTRSTNESQTAAERI 98
Query: 89 ARIIQK-LGFPAKF--KDFKIQNIVGSCDVKFPIRLEGL--AYSHGAFSSYEPELFPGLI 143
II+K L +F K+ +++NIV SC + +P+ L+ + H FS+Y+ + FPGLI
Sbjct: 99 FGIIKKQLNVDCRFENKEVQVRNIVASCKLGYPVCLDKIHDDKDHKQFSTYD-DTFPGLI 157
Query: 144 YR--------MKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YR K+ I+ L+F SGK+V TGAK +++ A++ I P F K
Sbjct: 158 YRYMLNPGEQKKKNNIIALVFASGKMVFTGAKSQEDIQQAYDKIKPEFVAFMK 210
>gi|432963770|ref|XP_004086828.1| PREDICTED: TATA-box-binding protein-like [Oryzias latipes]
Length = 237
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+KN+VS V+L C+LDL I N +YNPK + +IMRIR+P+TTA I+++GKM+CT A
Sbjct: 93 IKNVVSVVDLGCRLDLGAIGKALWNTQYNPKTYTGLIMRIRKPRTTANIYSTGKMICTAA 152
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVK-FPIRLEGLAYSHGAFSSY 134
S ++S+ AAR++ARI+QK GFP +F +F++ N V C VK F + LEGL S+ S+
Sbjct: 153 CSIEESRQAARRHARILQKAGFPVRFLNFRVINCV--CMVKTFCLNLEGLTRSNPQGFSF 210
Query: 135 EPELFPGLIYR 145
EPEL P + R
Sbjct: 211 EPELNPAVFLR 221
>gi|341582887|ref|YP_004763379.1| transcription factor [Thermococcus sp. 4557]
gi|340810545|gb|AEK73702.1| transcription factor [Thermococcus sp. 4557]
Length = 190
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+K+ N++YNP+ F +I R EPK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS + + A K ++++K+G AKF IQN+V S D+ L+ +A S
Sbjct: 71 KSVEDIERAVNKLIQMLKKIG--AKFARAPQIDIQNMVFSGDIGMEFNLDAVALSLPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 128 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAK---SEHDAWEAVRKLLRELEK 180
>gi|212224460|ref|YP_002307696.1| transcription factor [Thermococcus onnurineus NA1]
gi|226703563|sp|B6YXI6.1|TBP_THEON RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|212009417|gb|ACJ16799.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Thermococcus onnurineus NA1]
Length = 192
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 112/176 (63%), Gaps = 9/176 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+K+ N++YNP+ F +I R EPK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS + + A K ++++++G AKF+ IQN+V S D+ L+ +A S
Sbjct: 71 KSVEDIERAVNKLIQMLKRIG--AKFQRAPQIDIQNMVFSGDIGMEFNLDAVALSLPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 128 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAK---SEHDAWEAVRKLLRELEK 180
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R++EP+ L+F+SGK+VC+G
Sbjct: 101 DIQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE + A RK R ++K G
Sbjct: 161 AKSEHDAWEAVRKLLRELEKYGL 183
>gi|448732580|ref|ZP_21714852.1| transcription factor [Halococcus salifodinae DSM 8989]
gi|445804522|gb|EMA54773.1| transcription factor [Halococcus salifodinae DSM 8989]
Length = 191
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
A +N+V++ + ++DL+ +A+ A+++P +F +I R + K T LIF SG +
Sbjct: 12 ATLETQNVVASSGIGQEIDLESVAMDLTGADFDPGQFPGLIYRPDDAKATCLIFRSGAIT 71
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
CTGA+S ++ + + +LG + D +QNIV D+ + L +A G
Sbjct: 72 CTGAQSIEEVQETVHTAVGALVELGIDVEAPDVTVQNIVSGADLGETLNLNAIAIGLGLE 131
Query: 132 S-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
S YEPE FPGL+YR+ P +V L+F SGK+VITGAK+ DE A E I L + V
Sbjct: 132 SVEYEPEQFPGLVYRLDDPDVVALLFGSGKMVITGAKIHDEAEAALEEIIRRLNDLGLV 190
>gi|448414415|ref|ZP_21577484.1| transcription factor [Halosarcina pallida JCM 14848]
gi|445681981|gb|ELZ34405.1| transcription factor [Halosarcina pallida JCM 14848]
Length = 186
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A ++ L P + +QNIV S D+ + L LA G
Sbjct: 70 KSIDDVHEALGIIFDKLRGLSIPVDEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+ TA
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTDDAETA 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + + I LG
Sbjct: 160 TGGKQTDDAETAVVEIVKRIDNLGL 184
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 99 AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
A +IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF S
Sbjct: 3 APADSIEIQNVVASTGIGQELDLEALADDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRS 61
Query: 159 GKIVITGAKVRDETYTAFENIY 180
GKIV TGAK D+ + A I+
Sbjct: 62 GKIVCTGAKSIDDVHEALGIIF 83
>gi|261403691|ref|YP_003247915.1| transcription factor [Methanocaldococcus vulcanius M7]
gi|261370684|gb|ACX73433.1| TATA-box binding family protein [Methanocaldococcus vulcanius M7]
Length = 180
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+++AL NAEY P++F ++ R+ PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTKIGDNIDLEEVALILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + ++ G + + KIQN+V + D+ L+ +A + YEP
Sbjct: 69 KEEAEIAIKKIIKELKDAGIEVIENPEIKIQNMVATADLGIEPNLDDIALMVEG-TEYEP 127
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A I + E +++
Sbjct: 128 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALNKILETIKEVQEL 180
>gi|256810655|ref|YP_003128024.1| transcription factor [Methanocaldococcus fervens AG86]
gi|256793855|gb|ACV24524.1| TATA-box binding family protein [Methanocaldococcus fervens AG86]
Length = 180
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+++A+ NAEY P++F ++ R+ PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + ++ G + + KIQN+V + D+ L+ +A + YEP
Sbjct: 69 KEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVEG-TEYEP 127
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A + I L R+VQ+
Sbjct: 128 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKI---LDTIREVQE 179
>gi|110669284|ref|YP_659095.1| transcription factor [Haloquadratum walsbyi DSM 16790]
gi|385804848|ref|YP_005841248.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
gi|109627031|emb|CAJ53507.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
DSM 16790]
gi|148508283|gb|ABQ76067.1| TATA-binding transcription initiation factor [uncultured
haloarchaeon]
gi|339730340|emb|CCC41669.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
Length = 186
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R ++PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQKPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + + ++ L P + D +QNIV S D+ + L +A G +
Sbjct: 69 AKSTTDVRESLHIVFDKLRDLRIPVSDNPDITVQNIVTSADLGEDLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D+ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDNPAVVALLFGSGKLVITGGKEPDDAREAVDVILSRLDEL 182
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ P AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGEDLNLNAIAIGLGLENIEYEPEQFPGLVYRLDNPAVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + +LG
Sbjct: 160 TGGKEPDDAREAVDVILSRLDELGL 184
>gi|448466589|ref|ZP_21599175.1| transcription factor [Halorubrum kocurii JCM 14978]
gi|445813850|gb|EMA63824.1| transcription factor [Halorubrum kocurii JCM 14978]
Length = 186
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R +EPK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A ++ L P + D +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHEALGIIFEKLRGLQIPVEDDPDITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+
Sbjct: 129 EYEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKRTDD 167
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR ++PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIY 180
TGAK D+ + A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I+ LG
Sbjct: 160 TGGKRTDDAEEAVEEIVERIEGLGL 184
>gi|330507959|ref|YP_004384387.1| transcription factor TFIID [Methanosaeta concilii GP6]
gi|328928767|gb|AEB68569.1| transcription factor TFIID [Methanosaeta concilii GP6]
Length = 183
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ L + DL KI + AEYN ++F ++ R++ P+ LIF SGK+VCTG
Sbjct: 6 NIENVVASTKLAEEFDLHKIEAELEGAEYNKEKFPGLVYRVKAPRAAFLIFTSGKVVCTG 65
Query: 75 AKSEQQSKLAARKYARIIQKLGFP--AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AK+ + + A+ ++ +GF + +QNIV S D+K + L +A G +
Sbjct: 66 AKNVEDVRTVITNMAQTLKSIGFENIDLEPEIHVQNIVASADLKTDLNLNAIALGLGLEN 125
Query: 133 -SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YR+K PK+V+LIF SGK+V+TG K +E
Sbjct: 126 IEYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVTGGKSPEE 165
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQA--RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IAL N EY P++F ++ RI+ PK LIF+SGK+V T
Sbjct: 99 VQNIVASADLKTDLNLNAIALGLGLENIEYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVT 158
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G KS ++ + + ++ +G
Sbjct: 159 GGKSPEECEEGVKIVREQLENMGL 182
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGL-AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + L + A GA Y E FPGL+YR+K P+ LIF SGK+V
Sbjct: 5 INIENVVASTKLAEEFDLHKIEAELEGA--EYNKEKFPGLVYRVKAPRAAFLIFTSGKVV 62
Query: 163 ITGAKVRDETYTAFENIYPVL 183
TGAK ++ T N+ L
Sbjct: 63 CTGAKNVEDVRTVITNMAQTL 83
>gi|448498781|ref|ZP_21610993.1| transcription factor [Halorubrum coriense DSM 10284]
gi|445698147|gb|ELZ50197.1| transcription factor [Halorubrum coriense DSM 10284]
Length = 186
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R +EPK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A ++ L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHEALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+ A + I
Sbjct: 129 EYEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKRTDDAEEAVKEI 175
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A ++ I+ LG
Sbjct: 160 TGGKRTDDAEEAVKEIVERIEGLGL 184
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR ++PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIY 180
TGAK D+ + A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
>gi|390961570|ref|YP_006425404.1| TATA-box binding protein [Thermococcus sp. CL1]
gi|390519878|gb|AFL95610.1| TATA-box binding protein [Thermococcus sp. CL1]
Length = 187
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+K+ N++YNP+ F +I R EPK LIF+SGK+V TGA
Sbjct: 8 IENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSGKLVVTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKF---KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS + + A K ++++K+G AKF IQN+V S D+ L+ +A S
Sbjct: 68 KSVEDIERAVNKLIQMLKKIG--AKFGRAPQIDIQNMVFSGDIGMEFNLDAVALSLPN-C 124
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 125 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAK---SEHDAWEAVRKLLRELEK 177
>gi|15668684|ref|NP_247483.1| transcription factor [Methanocaldococcus jannaschii DSM 2661]
gi|2833518|sp|Q57930.1|TBP_METJA RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|1591210|gb|AAB98497.1| transcription initiation factor IID, TATA-box binding protein
[Methanocaldococcus jannaschii DSM 2661]
Length = 183
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+++A+ NAEY P++F ++ R+ PK LIF SGK+ CTGAKS
Sbjct: 12 NVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTGAKS 71
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + ++ G + + KIQN+V + D+ L+ +A + YEP
Sbjct: 72 KEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVEG-TEYEP 130
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A + I + E +++
Sbjct: 131 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEVQEL 183
>gi|313124795|ref|YP_004035059.1| tata binding protein of transcription factor tfiid [Halogeometricum
borinquense DSM 11551]
gi|448286783|ref|ZP_21478002.1| transcription factor [Halogeometricum borinquense DSM 11551]
gi|312291160|gb|ADQ65620.1| TATA binding protein of transcription factor TFIID [Halogeometricum
borinquense DSM 11551]
gi|445573322|gb|ELY27844.1| transcription factor [Halogeometricum borinquense DSM 11551]
Length = 187
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ L P + D +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLNLVFDKLRALQIPVDDEPDITVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K + A + I L++
Sbjct: 129 EYEPEQFPGLVYRLDSPDVVALLFGSGKLVITGGKHPSDAEGAVDEIVSRLSDL 182
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ P AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDSPDVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + + LG
Sbjct: 160 TGGKHPSDAEGAVDEIVSRLSDLGL 184
>gi|389848878|ref|YP_006351115.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448614622|ref|ZP_21663769.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388246184|gb|AFK21128.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445753956|gb|EMA05371.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 188
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Query: 9 ILGAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASG 68
+ G+V V+N+V++ + +LDL +++L +Y+P+ F ++ R PK L+F SG
Sbjct: 6 VTGSVE-VQNVVASTEVTLELDLDRLSLDMSGTDYDPENFPGLVYRTENPKAACLVFRSG 64
Query: 69 KMVCTGAKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYS 127
K+VCTGA S + A + LG P + +QNIV S D+ + L LA
Sbjct: 65 KIVCTGADSVEDVNTAIETLFDDLDDLGIPVPDDPNTTVQNIVSSADLGAALNLNALAIG 124
Query: 128 HGAFS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
G YEPE FPGL+YR+ P +V+L+F SGKIVITGA+ + +A E +
Sbjct: 125 LGLEDVEYEPEQFPGLVYRLDDPNVVVLMFGSGKIVITGAEAVVDAESALETV 177
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QN+V S +V + L+ L+ + Y+PE FPGL+YR + PK L+F SGKIV T
Sbjct: 11 EVQNVVASTEVTLELDLDRLSLDMSG-TDYDPENFPGLVYRTENPKAACLVFRSGKIVCT 69
Query: 165 GAKVRDETYTAFENIYPVLTEF 186
GA ++ TA E ++ L +
Sbjct: 70 GADSVEDVNTAIETLFDDLDDL 91
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++V+NIVS+ +L L+L +A L + EY P++F ++ R+ +P L+F SGK+V
Sbjct: 101 TTVQNIVSSADLGAALNLNALAIGLGLEDVEYEPEQFPGLVYRLDDPNVVVLMFGSGKIV 160
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
TGA++ ++ A +++LG
Sbjct: 161 ITGAEAVVDAESALETVDGDVRELGL 186
>gi|197305019|pdb|2Z8U|A Chain A, Methanococcus Jannaschii Tbp
gi|197305020|pdb|2Z8U|B Chain B, Methanococcus Jannaschii Tbp
gi|197305021|pdb|2Z8U|P Chain P, Methanococcus Jannaschii Tbp
gi|197305022|pdb|2Z8U|Q Chain Q, Methanococcus Jannaschii Tbp
Length = 188
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+++A+ NAEY P++F ++ R+ PK LIF SGK+ CTGAKS
Sbjct: 17 NVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTGAKS 76
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++++++A +K + ++ G + + KIQN+V + D+ L+ +A + YEP
Sbjct: 77 KEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVEG-TEYEP 135
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
E FPGL+YR+ PK+V+LIF SGK+VITG K ++ A + I + E +++
Sbjct: 136 EQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEVQEL 188
>gi|146304491|ref|YP_001191807.1| transcription factor [Metallosphaera sedula DSM 5348]
gi|145702741|gb|ABP95883.1| TATA binding protein of transcription factor TFIID [Metallosphaera
sedula DSM 5348]
Length = 176
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
++ LDL + N EY+P +F +I R+ PK T+LIF SGKMV TGAKS ++ A
Sbjct: 1 MEQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKA 60
Query: 85 ARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLI 143
++ + +++ G K +IQNIV S ++ + L+ A+ + YEPE FPGLI
Sbjct: 61 VKRIIKSLRRYGIRIGGKPKIQIQNIVASANMHVHVNLDKAAFLLEN-NMYEPEQFPGLI 119
Query: 144 YRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
+RM +P++VLLIF SGK+VITGAK DE Y A + I+ L E
Sbjct: 120 FRMDEPRVVLLIFSSGKMVITGAKREDEVYKAVKKIFDKLEEL 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ N+ ++L K A N Y P++F +I R+ EP+ LIF+SGKMV TGA
Sbjct: 83 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDEPRVVLLIFSSGKMVITGA 142
Query: 76 KSEQQSKLAARK 87
K E + A +K
Sbjct: 143 KREDEVYKAVKK 154
>gi|383318805|ref|YP_005379646.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanocella conradii HZ254]
gi|379320175|gb|AFC99127.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanocella conradii HZ254]
Length = 188
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + ++DLK + L A+Y+P++F ++ R ++PKT ALIF SGK+VCTG
Sbjct: 12 TIENVVASTAIGQEIDLKSVTLALEGADYDPEQFPGLVYRTKDPKTAALIFRSGKIVCTG 71
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +K + I +G + +QNIV S D+ + L +A G +
Sbjct: 72 AKSIEDVDRGLKKVFKKIASVGIKVDPNPEITVQNIVASADLGSVLNLNAIAIGLGLENI 131
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ PK+V+L+F SGK+V+TG K + A E I
Sbjct: 132 EYEPEQFPGLVYRLDSPKVVVLLFGSGKLVVTGGKKPKDAEEAVERI 178
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGK 160
K I+N+V S + I L+ + + GA Y+PE FPGL+YR K PK LIF SGK
Sbjct: 9 KTITIENVVASTAIGQEIDLKSVTLALEGA--DYDPEQFPGLVYRTKDPKTAALIFRSGK 66
Query: 161 IVITGAKVRDETYTAFENIY 180
IV TGAK ++ + ++
Sbjct: 67 IVCTGAKSIEDVDRGLKKVF 86
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ PK L+F SGK+V
Sbjct: 103 TVQNIVASADLGSVLNLNAIAIGLGLENIEYEPEQFPGLVYRLDSPKVVVLLFGSGKLVV 162
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + ++ A + + ++ L
Sbjct: 163 TGGKKPKDAEEAVERIVKELEGLAL 187
>gi|342306417|dbj|BAK54506.1| TATA box-binding protein [Sulfolobus tokodaii str. 7]
Length = 175
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 25 LDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
+D LDL + N EY+P +F +I R+ PK T+LIF SGKMV TGAKS + A
Sbjct: 1 MDQNLDLYAMERSVPNVEYDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGAKSTDELIKA 60
Query: 85 ARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLI 143
++ + +++ G K +IQNIV S ++ + L+ A+ + YEPE FPGLI
Sbjct: 61 VKRIIKTLKRYGMNLTGKPKIQIQNIVASANLHVIVNLDKAAFLLEN-NMYEPEQFPGLI 119
Query: 144 YRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YRM+ P++VLLIF SGK+VITGAK +E + A + I+ L E
Sbjct: 120 YRMEDPRVVLLIFSSGKMVITGAKREEEVHKAVKKIFDKLVEL 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV++ NL ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TG
Sbjct: 82 QIQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMEDPRVVLLIFSSGKMVITG 141
Query: 75 AKSEQQSKLAARK 87
AK E++ A +K
Sbjct: 142 AKREEEVHKAVKK 154
>gi|16517082|gb|AAL24503.1|AF418015_1 TATA box-binding protein-like protein [Crypthecodinium cohnii]
Length = 220
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
I++ NL C++DL+++A R+AEYNP++ +++ +R+ EP+ TA++ +SG + TG
Sbjct: 47 TIMAKFNLRCEIDLRQLAFALRHAEYNPRKHSSLTLRLVEPRATAMVRSSGVVSITGVLD 106
Query: 78 EQQSKLAARKYARIIQKLGF---PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+ K +A+K AR++Q+ G KF F I +I+ + FPIRL+ LA + Y
Sbjct: 107 LDELKQSAKKVARLVQRSGEGHEKVKFAGFTICSILAKASMGFPIRLDQLAAKWRRNALY 166
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR 187
EPEL+ G I+R +PK L+ GK++I+G + ++ + A + IYP+L EF+
Sbjct: 167 EPELYCGCIFRTTRPKCTYLLTSGGKVMISGFRNMEDVHEAVQRIYPILAEFK 219
>gi|55377538|ref|YP_135388.1| transcription factor [Haloarcula marismortui ATCC 43049]
gi|344211616|ref|YP_004795936.1| transcription factor/TATA-box binding family protein [Haloarcula
hispanica ATCC 33960]
gi|448630604|ref|ZP_21673184.1| transcription factor [Haloarcula vallismortis ATCC 29715]
gi|448639975|ref|ZP_21677123.1| transcription factor [Haloarcula sinaiiensis ATCC 33800]
gi|448659470|ref|ZP_21683325.1| transcription factor [Haloarcula californiae ATCC 33799]
gi|448666852|ref|ZP_21685497.1| transcription factor [Haloarcula amylolytica JCM 13557]
gi|448678006|ref|ZP_21689196.1| transcription factor [Haloarcula argentinensis DSM 12282]
gi|448688547|ref|ZP_21694349.1| transcription factor [Haloarcula japonica DSM 6131]
gi|74571974|sp|Q5V470.1|TBP_HALMA RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|55230263|gb|AAV45682.1| TATA-box binding protein E [Haloarcula marismortui ATCC 43049]
gi|343782971|gb|AEM56948.1| transcription factor / TATA-box binding family protein [Haloarcula
hispanica ATCC 33960]
gi|445755637|gb|EMA07020.1| transcription factor [Haloarcula vallismortis ATCC 29715]
gi|445760411|gb|EMA11674.1| transcription factor [Haloarcula californiae ATCC 33799]
gi|445762502|gb|EMA13723.1| transcription factor [Haloarcula sinaiiensis ATCC 33800]
gi|445771983|gb|EMA23039.1| transcription factor [Haloarcula amylolytica JCM 13557]
gi|445773681|gb|EMA24714.1| transcription factor [Haloarcula argentinensis DSM 12282]
gi|445779213|gb|EMA30150.1| transcription factor [Haloarcula japonica DSM 6131]
Length = 186
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A+ A+Y+P++F ++ R ++PK+ ALIF SGK+VCTG
Sbjct: 9 DIENVVASTGIGQELDLESVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHQSLRIVFDKLRDLNIQVDDDPEIVVQNIVSSADLGSSLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+V+TG K +++ A + I L++
Sbjct: 129 EYEPEQFPGLVYRLDEPDVVALLFGSGKLVVTGGKRKEDAEEAVDTIVERLSDL 182
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIVS+ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V T
Sbjct: 101 VQNIVSSADLGSSLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPDVVALLFGSGKLVVT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ ++ A + LG
Sbjct: 161 GGKRKEDAEEAVDTIVERLSDLGL 184
>gi|379335155|gb|AFD03144.1| 2-alkenal reductase [uncultured bacterium W5-77b]
Length = 186
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S++N+V++ +D KLDLK I ++ + E++P F + R++ PKT L+F +GKMVCTG
Sbjct: 9 SIENVVASATIDQKLDLKDITMKFPDVEWHPDMFPGAVFRLKNPKTATLLFRTGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
+KSE+ ++ A + + ++K K + IQNIV S ++ + LE A + S
Sbjct: 69 SKSEEIARKAVKTVVQELRKGKIKIKKEATVTIQNIVASINLGGRVHLEQAARTL-PRSM 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+R+ PK V+LIF SGK+V TG K + + + ++ +L E
Sbjct: 128 YEPEQFPGLIHRVLDPKTVILIFSSGKLVCTGGKTEKDVFRSVNQLHNLLEE 179
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 48/69 (69%)
Query: 12 AVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
A +++NIV+++NL ++ L++ A + Y P++F +I R+ +PKT LIF+SGK+V
Sbjct: 97 ATVTIQNIVASINLGGRVHLEQAARTLPRSMYEPEQFPGLIHRVLDPKTVILIFSSGKLV 156
Query: 72 CTGAKSEQQ 80
CTG K+E+
Sbjct: 157 CTGGKTEKD 165
>gi|448582755|ref|ZP_21646259.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|445732403|gb|ELZ83986.1| transcription factor [Haloferax gibbonsii ATCC 33959]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L P + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+VITG K ++ A + I L+E
Sbjct: 129 EYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPEDAEAAVDVIISRLSEL 182
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR ++PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQEPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + E ++ L E +
Sbjct: 66 CTGAKSTDDVHESLEIVFDKLRELQ 90
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGENLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + ++ A + +LG
Sbjct: 160 TGGKKPEDAEAAVDVIISRLSELGL 184
>gi|336477906|ref|YP_004617047.1| TATA-box binding family protein [Methanosalsum zhilinae DSM 4017]
gi|335931287|gb|AEH61828.1| TATA-box binding family protein [Methanosalsum zhilinae DSM 4017]
Length = 183
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L DL KI ++ AEYN ++F ++ R+ +PK L+F SGK+VCTGA
Sbjct: 8 IENVVASTKLAESFDLTKIEMEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
K+ + + AR + +G + D +QNIV S D+ + L +A G +
Sbjct: 68 KNVEDVHTVIKNMARKLNSIGVETVEDPDITVQNIVASADLHAILNLNAIAIGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 177
YEPE FPGL+YR+ +PK+V+LIF SGK+V+TG K ++ E
Sbjct: 128 YEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCEMGVE 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ RI EPK LIF+SGK+V
Sbjct: 98 TVQNIVASADLHAILNLNAIAIGLGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVV 157
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG KS + ++ + + +G
Sbjct: 158 TGGKSPEDCEMGVEVVRQQLDSMGL 182
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 103 DFKIQNIVGSCDV-------KFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLI 155
+ KI+N+V S + K + EG + Y + FPGL+YR+ PK L+
Sbjct: 5 NIKIENVVASTKLAESFDLTKIEMEFEG--------AEYNKQKFPGLVYRVSDPKAAFLV 56
Query: 156 FVSGKIVITGAKVRDETYTAFENI 179
F SGK+V TGAK ++ +T +N+
Sbjct: 57 FTSGKVVCTGAKNVEDVHTVIKNM 80
>gi|340344679|ref|ZP_08667811.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519820|gb|EGP93543.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 187
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 4/162 (2%)
Query: 26 DCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 85
D K+DL I + + EYNP +F ++ R++ PKT LIF +GKMVCTG KSE+ + A
Sbjct: 20 DQKIDLNDITKKFPDTEYNPDQFPGLVFRLQNPKTATLIFRTGKMVCTGGKSEEMAIKAV 79
Query: 86 RKYARIIQKLGFPAKFKDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLI 143
+ ++K G K KD +I QNIV S ++ + LE A + S YEPE FPGLI
Sbjct: 80 NTVVQKLRKGGIKVK-KDAEITVQNIVASINLGGKVHLEKAARTL-PRSMYEPEQFPGLI 137
Query: 144 YRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
+RM PK V+LIF SGK+V TGAK + + + N++ +L E
Sbjct: 138 HRMLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHALLEE 179
>gi|374628586|ref|ZP_09700971.1| TATA binding protein of transcription factor TFIID [Methanoplanus
limicola DSM 2279]
gi|373906699|gb|EHQ34803.1| TATA binding protein of transcription factor TFIID [Methanoplanus
limicola DSM 2279]
Length = 186
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + +LDL+ I + ++AEYN KRF V++R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVADELDLQMINEEIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 70
Query: 76 KSEQQSKLAARKYARIIQ--KLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
KS ++ KL P ++K+QNIV S D+ PI L +A
Sbjct: 71 KSIDNLSRGLEILGEKLRALKLDIPTNL-EYKVQNIVTSADLGSPINLNKIAVGFNLDRI 129
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+++PK+V+L+F SGK++ITG K ET A + ++++
Sbjct: 130 EYEPEQFPGLVYRLEEPKVVVLLFGSGKLIITGGK---ETKDAKAAVIKIMSDL 180
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L ++L KIA+ EY P++F ++ R+ EPK L+F SGK++ T
Sbjct: 102 VQNIVTSADLGSPINLNKIAVGFNLDRIEYEPEQFPGLVYRLEEPKVVVLLFGSGKLIIT 161
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + +K A K + LG
Sbjct: 162 GGKETKDAKAAVIKIMSDLSNLGL 185
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
KI+NIV S V + L+ + + Y + FPG++ RM+ PKI L+F SGK+V+
Sbjct: 9 LKIENIVASAKVADELDLQ-MINEEIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVL 67
Query: 164 TGAKVRDETYTAFE 177
TGAK D E
Sbjct: 68 TGAKSIDNLSRGLE 81
>gi|448610180|ref|ZP_21661030.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445745539|gb|ELZ97006.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ +++ A+Y+P F ++ R ++PK +LIF SGK+VCTGA
Sbjct: 13 IQNVVASTAVGQELDLESLSMDLVGADYDPDNFPGLVYRTQDPKAASLIFRSGKIVCTGA 72
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A + + KLG P + + IQNIV S D+ + L LA G
Sbjct: 73 SSVDDVDRALEQVFGELSKLGIPTDDREEATIQNIVSSADLGTTLNLNALAIGLGLEDVE 132
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR++ P +V+L+F SGKIVITGAK
Sbjct: 133 YEPEQFPGLVYRIEDPSVVVLMFGSGKIVITGAK 166
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 95 LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLL 154
+ A+ + +IQN+V S V + LE L+ + Y+P+ FPGL+YR + PK L
Sbjct: 2 MSHEARLESLEIQNVVASTAVGQELDLESLSMDL-VGADYDPDNFPGLVYRTQDPKAASL 60
Query: 155 IFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
IF SGKIV TGA D+ A E ++ L++
Sbjct: 61 IFRSGKIVCTGASSVDDVDRALEQVFGELSKL 92
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++++NIVS+ +L L+L +A L + EY P++F ++ RI +P L+F SGK+V
Sbjct: 102 ATIQNIVSSADLGTTLNLNALAIGLGLEDVEYEPEQFPGLVYRIEDPSVVVLMFGSGKIV 161
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + ++ A I LG
Sbjct: 162 ITGAKQVEHAREAINVVTDEIDALGL 187
>gi|354609688|ref|ZP_09027644.1| TATA-box-binding protein [Halobacterium sp. DL1]
gi|353194508|gb|EHB60010.1| TATA-box-binding protein [Halobacterium sp. DL1]
Length = 186
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + + + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRDLSIKVEDEPEIVVQNIVTSADLGRQLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P++V L+F SGK+VITG K ++ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVSRLEEL 182
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L +L+L IA L N EY P++F ++ R+ EP+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRQLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K +++LG
Sbjct: 161 GGKKPEDAEHAVDKIVSRLEELGL 184
>gi|452207285|ref|YP_007487407.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
gi|452083385|emb|CCQ36676.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
Length = 187
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ ++ +L L+++A+ +EYNP F +I RI+EP+ LIF SGK+VCTG
Sbjct: 9 DIENVVASTDIGQELALERLAMDLSGSEYNPDTFPGLIYRIQEPEAANLIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
A + + + ++ LG + +QNIV S D++ + L +A G
Sbjct: 69 ANTVDDVHSSLQTVCETLRDLGIDVIEAPTITVQNIVFSADLRAQLNLNAIAIGFGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D A E I L+E
Sbjct: 129 EYEPEQFPGLVYRLDTPDVVTLLFSSGKVVITGTKTPDAAEEALEKISGKLSEL 182
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQ--ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV + +L +L+L IA+ + EY P++F ++ R+ P L+F+SGK+V
Sbjct: 100 TVQNIVFSADLRAQLNLNAIAIGFGLEDVEYEPEQFPGLVYRLDTPDVVTLLFSSGKVVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K+ ++ A K + + +LG
Sbjct: 160 TGTKTPDAAEEALEKISGKLSELGL 184
>gi|397780477|ref|YP_006544950.1| TATA-box-binding protein [Methanoculleus bourgensis MS2]
gi|396938979|emb|CCJ36234.1| TATA-box-binding protein AltName: Full=TATA-box factor
[Methanoculleus bourgensis MS2]
Length = 237
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 104/181 (57%), Gaps = 18/181 (9%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL +A Q ++AEYN KRF V++R+++PK AL+F SGK+V TGA
Sbjct: 62 IENIVASAKVTDSLDLNSLASQLKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 121
Query: 76 KSEQQSKLAARKYARIIQKLG---------FPAKFKDFKIQNIVGSCDVKFPIRLEGLAY 126
KS +R +Q LG P +K+QNIV S D+ PI L +A
Sbjct: 122 KS-------IDNLSRGLQILGDQLRALNIDIPENLT-YKVQNIVTSADLGTPINLNKIAV 173
Query: 127 SHGAFS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGL+YR+ PK+V+L+F SGK++ITG K ++ A + I L+
Sbjct: 174 GFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIITGGKQPEDARRAVQRILSELSS 233
Query: 186 F 186
Sbjct: 234 L 234
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L ++L KIA+ EY P++F ++ R+ +PK L+F SGK++ T
Sbjct: 153 VQNIVTSADLGTPINLNKIAVGFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIIT 212
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A ++ + LG
Sbjct: 213 GGKQPEDARRAVQRILSELSSLGL 236
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ KI+NIV S V + L LA S + Y + FPG++ RM+ PKI L+F SGK+
Sbjct: 58 ESLKIENIVASAKVTDSLDLNSLA-SQLKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKV 116
Query: 162 VITGAKVRD 170
V+TGAK D
Sbjct: 117 VLTGAKSID 125
>gi|150400624|ref|YP_001324390.1| transcription factor [Methanococcus aeolicus Nankai-3]
gi|166227819|sp|A6UTF6.1|TBP_META3 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|150013327|gb|ABR55778.1| TATA-box binding protein [Methanococcus aeolicus Nankai-3]
Length = 181
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ +A N+EY P++F ++ R+ +PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTKIGDDIDLEYVADVLDNSEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++ + +A K +++ G + K+QN+V + ++ L+ L S + YEP
Sbjct: 69 KEDAVIAINKVMEYLREAGLDLIDTPEVKVQNMVATAELGMEPNLDDL--STLERTEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YRM+ PK+VLL+F SGK+VITG K +++ Y A E I + E +
Sbjct: 127 EQFPGLVYRMESPKVVLLVFGSGKVVITGLKNKEDAYIALEKIKNTVKELEE 178
>gi|386874579|ref|ZP_10116817.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
gi|386807612|gb|EIJ66993.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
Length = 186
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V ++ N+V++ ++ +LDL I + EY+P++F + R++ PKT L+F SGKMVC
Sbjct: 7 VIAIVNVVASATINQRLDLVDITKKFPAVEYHPEQFPGAVFRLKSPKTATLLFGSGKMVC 66
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKFKDF-KIQNIVGSCDVKFPIRLEGLAYSHGAF 131
TGAKS++ ++ A +K +++K K + IQNIV S ++ + LE A +
Sbjct: 67 TGAKSQELAETAVKKVVELLRKGKVKIKSEPIVTIQNIVSSINLGGKVSLEQAARTL-PR 125
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S YEPE FPGLI+RM PK V+LIF SGK+V GAK+ + + + I+ +L E
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILIFSSGKLVCVGAKLEKDVHRSVNQIHSLLEE 179
>gi|424813992|ref|ZP_18239170.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalina sp. J07AB43]
gi|339757608|gb|EGQ42865.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalina sp. J07AB43]
Length = 183
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ D L L +IA+ N EY P++F ++ R+ EPK AL+F SGK+VCTG
Sbjct: 8 DIQNVVASATFDQSLPLDRIAIYLENTEYEPEQFPGLVYRLEEPKAAALLFGSGKIVCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
+S +Q+K A K +++ K + +QNIV S ++ + L +A+ +
Sbjct: 68 TQSPEQAKEATHKIIDELKEADVEITNKPEITVQNIVASSELDATLNLNRIAFEL-VGTE 126
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGL+YR+ +P++V L+F SG +V TG + D+ N+ L E
Sbjct: 127 YEPEQFPGLVYRLDEPEVVFLLFSSGNLVCTGGRTYDDVENGISNLERDLKE 178
>gi|399578906|ref|ZP_10772650.1| hypothetical protein HSB1_46890 [Halogranum salarium B-1]
gi|399235932|gb|EJN56872.1| hypothetical protein HSB1_46890 [Halogranum salarium B-1]
Length = 189
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +++L+++A+ + A+YNP+ F ++ R+++PK LIF SGK+VCTGA
Sbjct: 10 IENVVASTGIGTEIELEQLAMDLQGADYNPENFPGIVYRLQDPKAATLIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + A ++ ++ LG + +QNIV S D+ + L +A G +
Sbjct: 70 KSIEYVHAACQRVFDDLRTLGIDVDDDPEVIVQNIVASADLGDSLNLNAIAIGLGLENIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ PK+V L+F SGK+VITG K + A I LTE
Sbjct: 130 YEPEQFPGLVYRIDDPKVVALLFGSGKLVITGGKTPSDAKRAVTVIVERLTEL 182
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ RI +PK AL+F SGK+V T
Sbjct: 101 VQNIVASADLGDSLNLNAIAIGLGLENIEYEPEQFPGLVYRIDDPKVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGFP 98
G K+ +K A + +LG P
Sbjct: 161 GGKTPSDAKRAVTVIVERLTELGMP 185
>gi|37724114|gb|AAO17774.1| TATA-box binding protein [Passer domesticus]
Length = 167
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/70 (84%), Positives = 65/70 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 98 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 157
Query: 71 VCTGAKSEQQ 80
VCTGAKSE+Q
Sbjct: 158 VCTGAKSEEQ 167
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 102 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 160
Query: 165 GAKVRDE 171
GAK ++
Sbjct: 161 GAKSEEQ 167
>gi|292654337|ref|YP_003534234.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|433428869|ref|ZP_20407252.1| transcription factor [Haloferax sp. BAB2207]
gi|448293881|ref|ZP_21483984.1| transcription factor [Haloferax volcanii DS2]
gi|448543937|ref|ZP_21625398.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|448551097|ref|ZP_21629239.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|448558528|ref|ZP_21633085.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|448573579|ref|ZP_21641062.1| transcription factor [Haloferax lucentense DSM 14919]
gi|448597726|ref|ZP_21654651.1| transcription factor [Haloferax alexandrinus JCM 10717]
gi|302595869|sp|D4GZA2.1|TBP1_HALVD RecName: Full=TATA-box-binding protein 1; AltName: Full=Box
A-binding protein 1; Short=BAP 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP 1; AltName:
Full=TATA-box factor 1
gi|291371886|gb|ADE04113.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|432195411|gb|ELK51946.1| transcription factor [Haloferax sp. BAB2207]
gi|445569802|gb|ELY24373.1| transcription factor [Haloferax volcanii DS2]
gi|445706079|gb|ELZ57966.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|445710653|gb|ELZ62451.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|445712280|gb|ELZ64062.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|445718485|gb|ELZ70175.1| transcription factor [Haloferax lucentense DSM 14919]
gi|445739187|gb|ELZ90696.1| transcription factor [Haloferax alexandrinus JCM 10717]
Length = 189
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L P + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+VITG K + A + I L+E
Sbjct: 129 EYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKQPTDAEAAVDVIISRLSEL 182
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR ++PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQEPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + E ++ L E +
Sbjct: 66 CTGAKSTDDVHESLEIVFDKLRELQ 90
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGENLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + +LG
Sbjct: 160 TGGKQPTDAEAAVDVIISRLSELGL 184
>gi|76801184|ref|YP_326192.1| transcription factor [Natronomonas pharaonis DSM 2160]
gi|121696850|sp|Q3ITB1.1|TBP_NATPD RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|76557049|emb|CAI48623.1| TATA-binding transcription initiation factor [Natronomonas
pharaonis DSM 2160]
Length = 187
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D+ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAREAVDKIVSRLEEL 182
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A K +++LG
Sbjct: 161 GGKEPDDAREAVDKIVSRLEELGL 184
>gi|315231074|ref|YP_004071510.1| TATA-box binding protein [Thermococcus barophilus MP]
gi|315184102|gb|ADT84287.1| TATA-box binding protein [Thermococcus barophilus MP]
Length = 190
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 9/176 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I R EPK L+F+SGK+V TGA
Sbjct: 11 IENIVASVDLFTQLDLEKVIEICPNSKYNPEEFPGIICRFDEPKVALLVFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS + + A K +++ K+G KF+ IQN+V S D+ L+ +A
Sbjct: 71 KSVEDIERAVSKLVQMLSKIG--TKFQRAPQIDIQNMVFSGDIGMEFNLDAVALVLPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 128 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAK---SEHDAWEAVRKLLRELEK 180
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R++EP+ L+F+SGK+VC+G
Sbjct: 101 DIQNMVFSGDIGMEFNLDAVALVLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDF 104
AKSE + A RK R ++K G + ++F
Sbjct: 161 AKSEHDAWEAVRKLLRELEKYGLIEEEEEF 190
>gi|375083218|ref|ZP_09730248.1| transcription factor [Thermococcus litoralis DSM 5473]
gi|374742172|gb|EHR78580.1| transcription factor [Thermococcus litoralis DSM 5473]
Length = 188
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L LDL+K+ +++YNP+ F +I R EPK L+F+SGK+V TGA
Sbjct: 11 IENIVASVDLFASLDLEKVIEICPHSKYNPEEFPGIICRFDEPKVALLVFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS + + A K ++ K+G KF + IQN+V S D+K L+ +A
Sbjct: 71 KSVEDIQAAVSKLVEMLSKIG--TKFTRAPEIDIQNMVFSGDLKMEFNLDAVALVLPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K PK V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 128 EYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAK---SEHDAWEAVKKLLHELEK 180
>gi|282162800|ref|YP_003355185.1| TATA-box-binding protein [Methanocella paludicola SANAE]
gi|282155114|dbj|BAI60202.1| TATA-box-binding protein [Methanocella paludicola SANAE]
Length = 188
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + ++DLK + L A+Y+P++F ++ R ++PKT ALIF SGK+VCTG
Sbjct: 12 TIENVVASTAIGQEIDLKSVTLALEGADYDPEQFPGLVYRTKDPKTAALIFRSGKIVCTG 71
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +K + + +G + + +QNIV S D+ + L +A G +
Sbjct: 72 AKSIEDVDRGLKKVFKKMDSVGIKVDQNPEITVQNIVASADLGSVLNLNAIAIGLGLENI 131
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ PK+V+L+F SGK+V+TG K + A + I
Sbjct: 132 EYEPEQFPGLVYRLDHPKVVVLLFGSGKLVVTGGKKPKDAEEAVDRI 178
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGK 160
K I+N+V S + I L+ + + GA Y+PE FPGL+YR K PK LIF SGK
Sbjct: 9 KTITIENVVASTAIGQEIDLKSVTLALEGA--DYDPEQFPGLVYRTKDPKTAALIFRSGK 66
Query: 161 IVITGAKVRDETYTAFENIY 180
IV TGAK ++ + ++
Sbjct: 67 IVCTGAKSIEDVDRGLKKVF 86
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ PK L+F SGK+V
Sbjct: 103 TVQNIVASADLGSVLNLNAIAIGLGLENIEYEPEQFPGLVYRLDHPKVVVLLFGSGKLVV 162
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + ++ A + + ++ L
Sbjct: 163 TGGKKPKDAEEAVDRIVKELEGLAL 187
>gi|2833470|sp|Q56253.1|TBP_THECE RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|498255|gb|AAA73412.1| TATA-binding protein [Thermococcus celer]
Length = 189
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+++ +++YNP+ F +I R EPK LIF+SGK+V TGA
Sbjct: 8 IENIVASVDLFTQLNLERVIEMCPHSKYNPEEFPGIICRFDEPKVALLIFSSGKLVVTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS + + A K ++++K+G AKF IQN+V S D+ L+ +A S
Sbjct: 68 KSVEDIERAVNKLIQMLKKIG--AKFSRAPQIDIQNMVFSGDIGMEFNLDAVALSLPN-C 124
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 125 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAK---SEHDAWEAVRKLLRELEK 177
>gi|448417264|ref|ZP_21579282.1| transcription factor [Halosarcina pallida JCM 14848]
gi|445678487|gb|ELZ30980.1| transcription factor [Halosarcina pallida JCM 14848]
Length = 187
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ L P + + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLELVFEKLRALQIPVEDDPEITVQNIVTSADLGRDLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K + A + I L++
Sbjct: 129 EYEPEQFPGLVYRLDSPDVVALLFGSGKLVITGGKQPSDAEKAVDEIVSRLSDL 182
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ P AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGRDLNLNAIAIGLGLENIEYEPEQFPGLVYRLDSPDVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + + LG
Sbjct: 160 TGGKQPSDAEKAVDEIVSRLSDLGL 184
>gi|448493598|ref|ZP_21609110.1| transcription factor [Halorubrum californiensis DSM 19288]
gi|445690153|gb|ELZ42373.1| transcription factor [Halorubrum californiensis DSM 19288]
Length = 186
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R +EPK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A ++ L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHDALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+
Sbjct: 129 EYEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTDD 167
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR ++PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIY 180
TGAK D+ + A I+
Sbjct: 67 TGAKSIDDVHDALGIIF 83
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I+ LG
Sbjct: 160 TGGKQTDDAEEAVEEIVERIEGLGL 184
>gi|448457842|ref|ZP_21595847.1| transcription factor [Halorubrum lipolyticum DSM 21995]
gi|445810143|gb|EMA60174.1| transcription factor [Halorubrum lipolyticum DSM 21995]
Length = 185
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + + ++KL P + + +QNIV S D+ + L +A G
Sbjct: 69 ANSIEAVHESLDLVFDELRKLQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V L+F SGK+V+TG D+ A + I
Sbjct: 129 YEPEQFPGLVYRIDEPDVVALLFGSGKLVVTGGTSPDDAAAAVDVI 174
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ RI EP AL+F SGK+V
Sbjct: 99 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRIDEPDVVALLFGSGKLVV 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPA 99
TG S + A + LG A
Sbjct: 159 TGGTSPDDAAAAVDVIVEELDGLGLLA 185
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 8 ITIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA + + + + ++ E RK+Q
Sbjct: 66 CTGANSIEAVHESLDLVF---DELRKLQ 90
>gi|448441657|ref|ZP_21589264.1| transcription factor [Halorubrum saccharovorum DSM 1137]
gi|445688693|gb|ELZ40944.1| transcription factor [Halorubrum saccharovorum DSM 1137]
Length = 185
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + ++KL P + + +QNIV S D+ + L +A G
Sbjct: 69 ANSIDAVHESLDLVFDELRKLQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ P +V L+F SGK+VITG D+ A + I
Sbjct: 129 YEPEQFPGLVYRIDDPDVVALLFGSGKLVITGGTTPDDAAAAVDVI 174
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 8 ITIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA D + + + ++ E RK+Q
Sbjct: 66 CTGANSIDAVHESLDLVF---DELRKLQ 90
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ RI +P AL+F SGK+V
Sbjct: 99 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRIDDPDVVALLFGSGKLVI 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG + + A + LG
Sbjct: 159 TGGTTPDDAAAAVDVIVEELDGLGL 183
>gi|45357820|ref|NP_987377.1| transcription factor [Methanococcus maripaludis S2]
gi|340623439|ref|YP_004741892.1| transcription factor [Methanococcus maripaludis X1]
gi|56749680|sp|Q6M0L3.1|TBP_METMP RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|45047380|emb|CAF29813.1| TATA-binding protein (TBP) [Methanococcus maripaludis S2]
gi|339903707|gb|AEK19149.1| transcription factor [Methanococcus maripaludis X1]
Length = 181
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 3/174 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V N+V + + +DL+ A NAEY P++F ++ R+ EPK LIF SGK+ CTGA
Sbjct: 7 VVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGKLNCTGA 66
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+ ++ + +A K + +++ G + K+QN+V + ++ L+ + S + Y
Sbjct: 67 RCKEDAVIAINKIVKELKEAGMDLIDNPEVKVQNMVATTELGMEPNLDDI--STLECTEY 124
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPE FPGL+YR+ +PK+V+LIF SGK+VITG KV ++ Y AF+ I L E +
Sbjct: 125 EPEQFPGLVYRLSEPKVVVLIFGSGKVVITGLKVIEDAYIAFDKISKTLKELEE 178
>gi|448606630|ref|ZP_21659056.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|448622378|ref|ZP_21669072.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445738838|gb|ELZ90350.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|445754460|gb|EMA05865.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 189
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L P + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+VITG K + A + I L+E
Sbjct: 129 EYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKQPKDAEAAVDVIISRLSEL 182
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR ++PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQEPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + E ++ L E +
Sbjct: 66 CTGAKSTDDVHESLEIVFDKLRELQ 90
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGENLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + ++ A + +LG
Sbjct: 160 TGGKQPKDAEAAVDVIISRLSELGL 184
>gi|10803585|ref|NP_045983.1| transcription factor [Halobacterium sp. NRC-1]
gi|10803718|ref|NP_046116.1| transcription factor [Halobacterium sp. NRC-1]
gi|16120020|ref|NP_395608.1| transcription factor [Halobacterium sp. NRC-1]
gi|16120342|ref|NP_395930.1| transcription factor [Halobacterium sp. NRC-1]
gi|14423949|sp|Q48325.1|TBPB_HALSA RecName: Full=TATA-box-binding protein B; AltName: Full=Box
A-binding protein B; Short=BAP B; AltName: Full=TATA
sequence-binding protein B; Short=TBP B; AltName:
Full=TATA-box factor B
gi|1070345|emb|CAA63691.1| TATA box binding protein [Halobacterium salinarum]
gi|2822316|gb|AAC82822.1| TbpB [Halobacterium sp. NRC-1]
gi|2822449|gb|AAC82955.1| TbpB [Halobacterium sp. NRC-1]
gi|10584112|gb|AAG20743.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
gi|10584490|gb|AAG21065.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
Length = 186
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ +L +L L +++ AEYNP+ F V+ R++EPK+ LIF SGK+VCTGA
Sbjct: 10 IENVVASSDLGQELALDQLSTDLPGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A I++LG ++QNIV S ++ + L +A G
Sbjct: 70 KSVDDVHEALGIVFGDIRELGIDVTSNPPIEVQNIVSSASLEQSLNLNAIAIGLGLEQIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V+L+F SGK+VITG + DE A ++ LTE
Sbjct: 130 YEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGGQNPDEAEQALAHVQDRLTEL 182
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIVS+ +L+ L+L IA L EY P++F ++ R+ +P L+F SGK+V T
Sbjct: 101 VQNIVSSASLEQSLNLNAIAIGLGLEQIEYEPEQFPGLVYRLDDPDVVVLLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G ++ +++ A + +LG
Sbjct: 161 GGQNPDEAEQALAHVQDRLTELGL 184
>gi|297620217|ref|YP_003708322.1| TATA-box binding family protein [Methanococcus voltae A3]
gi|297379194|gb|ADI37349.1| TATA-box binding family protein [Methanococcus voltae A3]
Length = 181
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ +PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTQIGTDIDLEYAADVLDNAEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
+ +++A +K +++ G + IQN+V + ++ L+ + S + YEP
Sbjct: 69 KSDAEIAIKKIIAELKEAGMEIIDNPEVSIQNMVATTELGMEPNLDDI--STLECTEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YR+ PK+V+LIF SGK+VITG K D+ YTAF I L E +
Sbjct: 127 EQFPGLVYRLSDPKVVVLIFGSGKVVITGLKKIDDAYTAFNKILTTLKELEE 178
>gi|432328919|ref|YP_007247063.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Aciduliprofundum sp. MAR08-339]
gi|432135628|gb|AGB04897.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Aciduliprofundum sp. MAR08-339]
Length = 181
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ +L KLDL KIAL AEY P++F +I R+ EPKT LIF SGK+ CTGA
Sbjct: 6 IENIVASTSLADKLDLSKIALALDGAEYEPEQFPGLIYRLPEPKTAVLIFRSGKVNCTGA 65
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFS- 132
K ++ + + ++ G + + KI QNIV D+ + L +A S G +
Sbjct: 66 KDIEKVEKTIKILVDKLKAAGIEV-YDNPKIVVQNIVAVYDLGVELNLTDIAMSLGLENV 124
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+++PK+VLL+F SGK+V TGAK ++E A + +
Sbjct: 125 EYEPEQFPGLVYRIEEPKVVLLLFGSGKVVCTGAKKKEEIVEAIKKL 171
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L +L+L IA L N EY P++F ++ RI EPK L+F SGK+VCT
Sbjct: 97 VQNIVAVYDLGVELNLTDIAMSLGLENVEYEPEQFPGLVYRIEEPKVVLLLFGSGKVVCT 156
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK +++ A +K + ++ +G
Sbjct: 157 GAKKKEEIVEAIKKLKKELESVGL 180
>gi|452205985|ref|YP_007486107.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
gi|452082085|emb|CCQ35336.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
Length = 187
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D+ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKIVSRLEEL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K +K A K +++LG
Sbjct: 161 GGKEPDDAKKAVDKIVSRLEELGL 184
>gi|407465173|ref|YP_006776055.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
gi|407048361|gb|AFS83113.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
Length = 186
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++ N+V++ ++ KLDL I + EY+P++F + R++ PKT L+F SGKMVCTG
Sbjct: 9 AIVNVVASATIEQKLDLVDITKKFPAVEYHPEQFPGAVFRLKNPKTATLLFGSGKMVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDF-KIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
AKS++ ++ A + +I++K K IQNIV S ++ + LE A + S
Sbjct: 69 AKSQELAETAVFEVVKILRKGKIKIKNDPIVSIQNIVSSINLGGKVNLEQAARTL-PRSM 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
YEPE FPGLI+RM PK V+LIF SGK+V GAK+ + + + I+ +L E
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILIFASGKLVCVGAKLEKDVHRSVNQIHALLEE 179
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+ S++NIVS++NL K++L++ A + Y P++F +I R+ +PKT LIFASGK+VC
Sbjct: 98 IVSIQNIVSSINLGGKVNLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILIFASGKLVC 157
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
GAK E+ + + ++++ G
Sbjct: 158 VGAKLEKDVHRSVNQIHALLEEKGL 182
>gi|70607094|ref|YP_255964.1| transcription factor [Sulfolobus acidocaldarius DSM 639]
gi|68567742|gb|AAY80671.1| TATA-binding protein [Sulfolobus acidocaldarius DSM 639]
Length = 166
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Query: 40 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPA 99
N EY+P +F +I R+ PK T+LIF SGKMV TGAKS + A ++ + ++K G
Sbjct: 7 NVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKYGMQL 66
Query: 100 KFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K +IQNIV S ++ + L+ A+ + YEPE FPGLIYRM +P++VLLIF S
Sbjct: 67 TGKPKIQIQNIVASANLHVIVNLDKAAFLLEN-NMYEPEQFPGLIYRMDEPRVVLLIFSS 125
Query: 159 GKIVITGAKVRDETYTAFENIYPVLTEF 186
GK+VITGAK DE + A + I+ L E
Sbjct: 126 GKMVITGAKREDEVHKAVKKIFDKLVEL 153
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL ++L K A N Y P++F +I R+ EP+ LIF+SGKMV TGA
Sbjct: 74 IQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGA 133
Query: 76 KSEQQSKLAARK 87
K E + A +K
Sbjct: 134 KREDEVHKAVKK 145
>gi|432331260|ref|YP_007249403.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanoregula formicicum SMSP]
gi|432137969|gb|AGB02896.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanoregula formicicum SMSP]
Length = 186
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL +A + ++AEYN KRF V++R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDYLDLPALASRIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
KS +++KL P K ++KIQNIV S D+ I L +A
Sbjct: 71 KSIDSLSKGLNILGNLLRKLDIDIPKKL-NYKIQNIVTSADLATAINLNKIAVGFNLDRI 129
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPE FPGL+YR+ PK+V+L+F SGK++ITG K E A + + +L++ R +
Sbjct: 130 EYEPEQFPGLVYRLDNPKVVVLLFGSGKLIITGGK---EPEDAKKAVVKILSDLRSL 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++NIV++ +L ++L KIA+ EY P++F ++ R+ PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLATAINLNKIAVGFNLDRIEYEPEQFPGLVYRLDNPKVVVLLFGSGKLIIT 161
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + +K A K ++ LG
Sbjct: 162 GGKEPEDAKKAVVKILSDLRSLGL 185
>gi|257076321|ref|ZP_05570682.1| transcription factor [Ferroplasma acidarmanus fer1]
Length = 184
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 111/181 (61%), Gaps = 13/181 (7%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIV++ +L LDL +IAL +EY P++F +I R+++PKT LIF SGK+ CTG
Sbjct: 8 TIENIVASTSLAEHLDLSRIALALEGSEYEPEQFPGLIYRLKDPKTAVLIFRSGKVNCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-----DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
AK+ + K + II KL AK + D +QNIV D++ + L +A S G
Sbjct: 68 AKNLENVK---KTIDIIIDKLK-KAKIEVYDNPDIIVQNIVAVYDLESDLNLTDIAMSLG 123
Query: 130 AFS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
+ YEPE FPGL+YR+++PK+VLL+F SGK+V TGAK E A + V E +K
Sbjct: 124 LENVEYEPEQFPGLVYRVEEPKVVLLLFGSGKVVCTGAKEESEIEQA---VIKVKKELQK 180
Query: 189 V 189
V
Sbjct: 181 V 181
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L+ L+L IA L N EY P++F ++ R+ EPK L+F SGK+VCT
Sbjct: 100 VQNIVAVYDLESDLNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPKVVLLLFGSGKVVCT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK E + + A K + +QK+G
Sbjct: 160 GAKEESEIEQAVIKVKKELQKVGL 183
>gi|448428387|ref|ZP_21584257.1| transcription factor [Halorubrum terrestre JCM 10247]
gi|448429752|ref|ZP_21584617.1| transcription factor [Halorubrum tebenquichense DSM 14210]
gi|448439730|ref|ZP_21588142.1| transcription factor [Halorubrum saccharovorum DSM 1137]
gi|448453748|ref|ZP_21594091.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|448454831|ref|ZP_21594311.1| transcription factor [Halorubrum lipolyticum DSM 21995]
gi|448474251|ref|ZP_21602110.1| transcription factor [Halorubrum aidingense JCM 13560]
gi|448485769|ref|ZP_21606914.1| transcription factor [Halorubrum arcis JCM 13916]
gi|448511919|ref|ZP_21616298.1| transcription factor [Halorubrum distributum JCM 9100]
gi|448519932|ref|ZP_21618139.1| transcription factor [Halorubrum distributum JCM 10118]
gi|448537266|ref|ZP_21622541.1| transcription factor [Halorubrum hochstenium ATCC 700873]
gi|445676556|gb|ELZ29076.1| transcription factor [Halorubrum terrestre JCM 10247]
gi|445689808|gb|ELZ42032.1| transcription factor [Halorubrum tebenquichense DSM 14210]
gi|445690882|gb|ELZ43085.1| transcription factor [Halorubrum saccharovorum DSM 1137]
gi|445694753|gb|ELZ46872.1| transcription factor [Halorubrum distributum JCM 9100]
gi|445702110|gb|ELZ54073.1| transcription factor [Halorubrum hochstenium ATCC 700873]
gi|445703496|gb|ELZ55426.1| transcription factor [Halorubrum distributum JCM 10118]
gi|445807548|gb|EMA57633.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|445814514|gb|EMA64476.1| transcription factor [Halorubrum lipolyticum DSM 21995]
gi|445817468|gb|EMA67342.1| transcription factor [Halorubrum arcis JCM 13916]
gi|445817558|gb|EMA67427.1| transcription factor [Halorubrum aidingense JCM 13560]
Length = 186
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R +EPK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A ++ L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHEALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+
Sbjct: 129 EYEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKRTDD 167
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR ++PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIY 180
TGAK D+ + A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I+ LG
Sbjct: 160 TGGKRTDDAEEAVEEIVERIEGLGL 184
>gi|386001066|ref|YP_005919365.1| TATA-box-binding protein [Methanosaeta harundinacea 6Ac]
gi|357209122|gb|AET63742.1| TATA-box-binding protein [Methanosaeta harundinacea 6Ac]
Length = 183
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ L + DL KI + AEYN ++F ++ R++ P+ LIF SGK+VCTG
Sbjct: 6 NIENVVASTKLAEEFDLIKIEAELEGAEYNKEKFPGLVYRVKSPRAAFLIFTSGKVVCTG 65
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AK+ + + A+ ++ +GF D +QNIV S D+K + +A G +
Sbjct: 66 AKNVEDVRTVITNMAQTLKSIGFEDVNLDPEIHVQNIVASADLKTDLNPNAIALGLGLEN 125
Query: 133 -SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YR+K PK+V+LIF SGK+V+TG K +E
Sbjct: 126 IEYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVTGGKSPEE 165
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQA--RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+ IAL N EY P++F ++ RI+ PK LIF+SGK+V T
Sbjct: 99 VQNIVASADLKTDLNPNAIALGLGLENIEYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVT 158
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G KS ++ + + ++ LG
Sbjct: 159 GGKSPEECEEGVKIVRVQLENLGL 182
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 104 FKIQNIVGSCD-------VKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIF 156
I+N+V S +K LEG + Y E FPGL+YR+K P+ LIF
Sbjct: 5 INIENVVASTKLAEEFDLIKIEAELEG--------AEYNKEKFPGLVYRVKSPRAAFLIF 56
Query: 157 VSGKIVITGAKVRDETYTAFENIYPVL 183
SGK+V TGAK ++ T N+ L
Sbjct: 57 TSGKVVCTGAKNVEDVRTVITNMAQTL 83
>gi|222479944|ref|YP_002566181.1| transcription factor [Halorubrum lacusprofundi ATCC 49239]
gi|222452846|gb|ACM57111.1| TATA-box binding family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 186
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R +EPK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A ++ L P + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHEALGIIFEKLRGLQIPVEEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YRM +P++V+L+F SGKIVITG K D+
Sbjct: 129 EYEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKRTDD 167
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR ++PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIY 180
TGAK D+ + A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ EP+ L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A + I+ LG
Sbjct: 160 TGGKRTDDAEEAVEEIVERIEGLGL 184
>gi|340503459|gb|EGR30047.1| tata-box binding protein, putative [Ichthyophthirius multifiliis]
Length = 184
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 99/170 (58%), Gaps = 11/170 (6%)
Query: 28 KLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARK 87
K DL I + +N +YNP+RF AV MRI+EPK T LI+ASG M G KS ++S+ AA K
Sbjct: 9 KFDLTTIGQKCKNTQYNPRRFPAVFMRIKEPKATGLIYASGNMTIVGTKSIEESQRAAEK 68
Query: 88 YARIIQ-----KLGFPAKFKDFKIQ--NIVGSCDVKFPIRLEGLAYS--HGAFSSYEPEL 138
+ I+ K G +F++ KIQ NIV SC + + I L L H F++YE +
Sbjct: 69 MLKDIKRALEIKEG-ECEFQEKKIQVRNIVASCKLGYKINLNSLNEDNEHNKFATYE-DT 126
Query: 139 FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
FPGLIY+ IV LIF SGK+V TGAK + AFE + +F K
Sbjct: 127 FPGLIYKKFNSNIVALIFASGKMVFTGAKSEQDIKNAFEQMGQAFQKFEK 176
>gi|448610758|ref|ZP_21661425.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445744442|gb|ELZ95920.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 188
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
V+N+V++ + +LDL +++L + +Y+P+ F ++ R +PK L+F SGK+VCTGA
Sbjct: 12 VQNVVASTEVSFELDLDRLSLDMSSTDYDPENFPGLVYRTHDPKAACLVFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A + LG P IQNIV S D+ + L LA G +
Sbjct: 72 DSVTDVNAAIETLFDELDSLGVPVPDDPSPTIQNIVSSADLGGALNLNALAIGLGLEAVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 177
YEPE FPGL+YR+ +P +V+L+F SGKIVITGA+ + +A E
Sbjct: 132 YEPEQFPGLVYRLDEPNVVILMFGSGKIVITGAEAVADAESALE 175
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ ++QN+V S +V F + L+ L+ + + Y+PE FPGL+YR PK L+F SGKI
Sbjct: 8 RSVEVQNVVASTEVSFELDLDRLSLDMSS-TDYDPENFPGLVYRTHDPKAACLVFRSGKI 66
Query: 162 VITGAKVRDETYTAFENIYPVLTEF 186
V TGA + A E ++ L
Sbjct: 67 VCTGADSVTDVNAAIETLFDELDSL 91
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+++NIVS+ +L L+L +A L EY P++F ++ R+ EP L+F SGK+V
Sbjct: 102 TIQNIVSSADLGGALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPNVVILMFGSGKIVI 161
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGA++ ++ A +++LG
Sbjct: 162 TGAEAVADAESALEVVDSDVRELGL 186
>gi|48477578|ref|YP_023284.1| transcription factor [Picrophilus torridus DSM 9790]
gi|56749679|sp|Q6L1R1.1|TBP_PICTO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|48430226|gb|AAT43091.1| TATA-box binding protein [Picrophilus torridus DSM 9790]
Length = 184
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 104/167 (62%), Gaps = 10/167 (5%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIV++ +L LDL KIAL +EY P++F +I R++EPKT LIF SGK+ CTG
Sbjct: 8 TIENIVASTSLAEHLDLSKIALALEGSEYEPEQFPGLIYRLQEPKTAVLIFRSGKVNCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-----DFKIQNIVGSCDVKFPIRLEGLAYSHG 129
AK+ K + II KL A + D +QNIV D++ + L +A S G
Sbjct: 68 AKNLDDVK---KTIDIIIDKLK-KADIEVYDNPDIIVQNIVAVYDLESNLNLTDIAMSLG 123
Query: 130 AFS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
+ YEPE FPGL+YR+++PK+VLL+F SGK+V TGAK +E A
Sbjct: 124 LENVEYEPEQFPGLVYRVEEPKVVLLLFGSGKVVCTGAKEENEIEQA 170
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L+ L+L IA L N EY P++F ++ R+ EPK L+F SGK+VCT
Sbjct: 100 VQNIVAVYDLESNLNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPKVVLLLFGSGKVVCT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK E + + A K + +QK+G
Sbjct: 160 GAKEENEIEQAVIKVKKDLQKVGL 183
>gi|448475876|ref|ZP_21603231.1| transcription factor [Halorubrum aidingense JCM 13560]
gi|445816094|gb|EMA66003.1| transcription factor [Halorubrum aidingense JCM 13560]
Length = 185
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + ++ L P + +QNIV S D+ + L +A G
Sbjct: 69 ASSIDAVHESLAIVFDELRALQIPIDDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
YEPE FPGL+YR+ +P +V L+F SGK+V+TG D+ A + I LT
Sbjct: 129 YEPEQFPGLVYRLDEPDVVALLFGSGKLVVTGGTTPDDAAAAVDVIVEELT 179
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 99 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPDVVALLFGSGKLVV 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG + + A + LG
Sbjct: 159 TGGTTPDDAAAAVDVIVEELTGLGL 183
>gi|242398131|ref|YP_002993555.1| Transcription factor TFIID [Thermococcus sibiricus MM 739]
gi|259517220|sp|C6A0R1.1|TBP_THESM RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|242264524|gb|ACS89206.1| Transcription factor TFIID [Thermococcus sibiricus MM 739]
Length = 185
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 107/177 (60%), Gaps = 2/177 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L LDL+K+ +++YNP+ F +I R EPK L+F+SGK+V TGA
Sbjct: 8 IENIVASVDLFASLDLEKVIEICPHSKYNPEEFPGIICRFDEPKVALLVFSSGKLVVTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS + A K ++ K+G + + IQN+V S D+K L+ +A Y
Sbjct: 68 KSVDDIQAAVSKLVEMLSKIGTKFGRAPEIDIQNMVFSGDLKMEFNLDAVALVLPN-CEY 126
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
EPE FPG+IYR+K PK V+L+F SGKIV +GAK + + A + + L ++ +++
Sbjct: 127 EPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSEHDAWEAVKKLLHELDKYGLIEE 183
>gi|345004914|ref|YP_004807767.1| TATA-box-binding protein [halophilic archaeon DL31]
gi|344320540|gb|AEN05394.1| TATA-box-binding protein [halophilic archaeon DL31]
Length = 186
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +LDL+ +A A++NP F ++ R ++PK ALIF SGK+VCTG
Sbjct: 9 EIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS A + ++ L P + + + +QNIV S D+ + L LA G
Sbjct: 69 AKSIDDVHDALAIIFQKLRDLTIPVEEEPEITVQNIVSSADLGHNLNLNALAIGLGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YRM P +V+L+F SGKIVITG K + A E I
Sbjct: 129 EYEPEQFPGLVYRMDDPDVVILLFGSGKIVITGGKQVQDAQEAVEKI 175
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS+ +L L+L +A L + EY P++F ++ R+ +P L+F SGK+V
Sbjct: 100 TVQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDDPDVVILLFGSGKIVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K Q ++ A K I+ LG
Sbjct: 160 TGGKQVQDAQEAVEKIVERIEGLGL 184
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S + + LE LA + + P+ FPGL+YR + PK LIF SGKIV
Sbjct: 8 IEIQNVVASTGIGQELDLEALAEDLPG-ADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVLTEF 186
TGAK D+ + A I+ L +
Sbjct: 67 TGAKSIDDVHDALAIIFQKLRDL 89
>gi|254167829|ref|ZP_04874678.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
gi|254167914|ref|ZP_04874763.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
gi|197623120|gb|EDY35686.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
gi|197623205|gb|EDY35771.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
Length = 185
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV++ +L KLDL KIAL AEY P++F +I R+ EPKT LIF SGK+ CTG
Sbjct: 9 QIENIVASTSLADKLDLSKIALALDGAEYEPEQFPGLIYRLPEPKTAVLIFRSGKVNCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFS 132
AK ++ + + ++ G + + KI QNIV D+ + L +A S G +
Sbjct: 69 AKDIERVEKTIKILVDKLKAAGIEV-YDNPKIVVQNIVAVYDLGVELNLTDIAMSLGLEN 127
Query: 133 -SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +PK+VLL+F SGK+V TGAK ++E A + +
Sbjct: 128 VEYEPEQFPGLVYRIDEPKVVLLLFGSGKVVCTGAKKKEEIVEAIKKL 175
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L +L+L IA L N EY P++F ++ RI EPK L+F SGK+VCT
Sbjct: 101 VQNIVAVYDLGVELNLTDIAMSLGLENVEYEPEQFPGLVYRIDEPKVVLLLFGSGKVVCT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK +++ A +K + ++ +G
Sbjct: 161 GAKKKEEIVEAIKKLKKELENVGL 184
>gi|257052326|ref|YP_003130159.1| transcription factor [Halorhabdus utahensis DSM 12940]
gi|256691089|gb|ACV11426.1| TATA-box binding family protein [Halorhabdus utahensis DSM 12940]
Length = 186
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFGKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D+ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKIVSRLEEL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K +K A K +++LG
Sbjct: 161 GGKEPDDAKKAVDKIVSRLEELGL 184
>gi|355572992|ref|ZP_09043960.1| TATA-box-binding protein [Methanolinea tarda NOBI-1]
gi|354824004|gb|EHF08263.1| TATA-box-binding protein [Methanolinea tarda NOBI-1]
Length = 186
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL +A Q ++AEYN KRF V++R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDYLDLPALASQIKDAEYNKKRFPGVVIRMQQPKIAALVFGSGKVVLTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLG--FPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
KS + +++ L P K +KIQNIV S D+ I L +A
Sbjct: 71 KSIESLSQGLEILGNLLRGLNIDIPKKLT-YKIQNIVTSADLGSGINLNKIAVGFNLDRI 129
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPE FPGL+YR++ PK+V+L+F SGK++ITG K ++ A + I LT+ + +
Sbjct: 130 EYEPEQFPGLVYRLENPKVVVLLFGSGKLIITGGKEPEDARKAVQKI---LTDLKNL 183
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++NIV++ +L ++L KIA+ EY P++F ++ R+ PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLGSGINLNKIAVGFNLDRIEYEPEQFPGLVYRLENPKVVVLLFGSGKLIIT 161
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A +K ++ LG
Sbjct: 162 GGKEPEDARKAVQKILTDLKNLGL 185
>gi|257386786|ref|YP_003176559.1| TATA-box binding family protein [Halomicrobium mukohataei DSM
12286]
gi|257169093|gb|ACV46852.1| TATA-box binding family protein [Halomicrobium mukohataei DSM
12286]
Length = 186
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R ++PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHQSLRIVFDKLRDLNIQVDDDPEIVVQNIVTSADLGRTLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D+ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKEAVDKIVSRLEDL 182
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K +K A K ++ LG
Sbjct: 161 GGKEPDDAKEAVDKIVSRLEDLGL 184
>gi|289596646|ref|YP_003483342.1| TATA-box binding family protein [Aciduliprofundum boonei T469]
gi|289534433|gb|ADD08780.1| TATA-box binding family protein [Aciduliprofundum boonei T469]
Length = 181
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 4/167 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ +L KLDL KIAL AEY P++F +I R+ EPKT LIF SGK+ CTGA
Sbjct: 6 IENIVASTSLADKLDLSKIALALDGAEYEPEQFPGLIYRLPEPKTAVLIFRSGKVNCTGA 65
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDFKI--QNIVGSCDVKFPIRLEGLAYSHGAFS- 132
K ++ + + ++ G + + KI QNIV D+ + L +A S G +
Sbjct: 66 KDIERVEKTIKILVDKLKAAGIEV-YDNPKIVVQNIVAVYDLGVELNLTDIAMSLGLENV 124
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +PK+VLL+F SGK+V TGAK ++E A + +
Sbjct: 125 EYEPEQFPGLVYRIDEPKVVLLLFGSGKVVCTGAKKKEEIVEAIKKL 171
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L +L+L IA L N EY P++F ++ RI EPK L+F SGK+VCT
Sbjct: 97 VQNIVAVYDLGVELNLTDIAMSLGLENVEYEPEQFPGLVYRIDEPKVVLLLFGSGKVVCT 156
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK +++ A +K + ++ +G
Sbjct: 157 GAKKKEEIVEAIKKLKKELENVGL 180
>gi|16120311|ref|NP_395899.1| transcription factor [Halobacterium sp. NRC-1]
gi|14423950|sp|Q9HHE9.1|TBPF_HALSA RecName: Full=TATA-box-binding protein F; AltName: Full=Box
A-binding protein F; Short=BAP F; AltName: Full=TATA
sequence-binding protein F; Short=TBP F; AltName:
Full=TATA-box factor F
gi|10584455|gb|AAG21034.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
Length = 186
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ +L +L L ++A AEYNP+ F V+ R++EPK+ LIF SGK+VCTGA
Sbjct: 10 IENVVASSDLGQELALDQLATDLDGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS A +++LG K+QNIV S ++ + L +A G
Sbjct: 70 KSVDAVHDALEIVFDDLRELGIDVDSTPPVKVQNIVSSASLEQSLNLNAIAIGLGLEQIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V+L+F SGK+VITGA + A ++ LTE
Sbjct: 130 YEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGAAESADAQHALAHVNDRLTEL 182
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIVS+ +L+ L+L IA L EY P++F ++ R+ +P L+F SGK+V T
Sbjct: 101 VQNIVSSASLEQSLNLNAIAIGLGLEQIEYEPEQFPGLVYRLDDPDVVVLLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GA ++ A + +LG
Sbjct: 161 GAAESADAQHALAHVNDRLTELGL 184
>gi|14590849|ref|NP_142921.1| transcription factor [Pyrococcus horikoshii OT3]
gi|6647870|sp|O58737.1|TBP_PYRHO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|3257423|dbj|BAA30106.1| 191aa long hypothetical TATA-binding protein (transcription
initiation factor TFIID) [Pyrococcus horikoshii OT3]
Length = 191
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 11/177 (6%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
KS Q + R A++IQKL G KFK +QN+V S D+ L+ +A +
Sbjct: 71 KSIQDIE---RAVAKLIQKLKGIGVKFKRAPLIDVQNMVFSGDIGREFNLDNVALTLPN- 126
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 127 CEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEAD---AWEAVRKLLRELEK 180
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
V+N+V + ++ + +L +AL N EY P++F VI R++EP+ L+F+SGK+VC+G
Sbjct: 101 DVQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE + A RK R ++K G
Sbjct: 161 AKSEADAWEAVRKLLRELEKYGL 183
>gi|379994425|gb|AFD22839.1| TATA-box-binding protein, partial [Collodictyon triciliatum]
Length = 80
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 100 KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSG 159
+F DFKIQNIVGSCDV FPIRLEGLA+ H ++ SYEPELFPGLIYRM++PKIVLLIFVSG
Sbjct: 3 RFLDFKIQNIVGSCDVSFPIRLEGLAHVHHSYCSYEPELFPGLIYRMQEPKIVLLIFVSG 62
Query: 160 KIVITGAKVRDETYTAFE 177
KIV+TGAK R + F+
Sbjct: 63 KIVLTGAKTRLDITRGFQ 80
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIA-LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV + ++ + L+ +A + Y P+ F +I R++EPK LIF SGK+V TG
Sbjct: 9 IQNIVGSCDVSFPIRLEGLAHVHHSYCSYEPELFPGLIYRMQEPKIVLLIFVSGKIVLTG 68
Query: 75 AKS 77
AK+
Sbjct: 69 AKT 71
>gi|150400012|ref|YP_001323779.1| transcription factor [Methanococcus vannielii SB]
gi|166227822|sp|A6URP5.1|TBP_METVS RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|150012715|gb|ABR55167.1| TATA-box binding [Methanococcus vannielii SB]
Length = 181
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ +PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
++ +++A +K + +++ G + D +QN+V + ++ L+ + S + Y
Sbjct: 69 KEDAEIAIKKIIKELKEAGM--EIIDNPVVSVQNMVATTELGMEPNLDDI--STLECTEY 124
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPE FPGL+YR+ PK+V+LIF SGK+VITG KV ++ Y AF+ I L E +
Sbjct: 125 EPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYIAFDKISATLKELEQ 178
>gi|150403180|ref|YP_001330474.1| transcription factor [Methanococcus maripaludis C7]
gi|166227820|sp|A6VIP7.1|TBP_METM7 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|150034210|gb|ABR66323.1| TATA-box binding [Methanococcus maripaludis C7]
Length = 181
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ +PK LIF SGK+ CTGAKS
Sbjct: 9 NVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGAKS 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
+ + +A K + +Q+ G + +QN+V + ++ L+ + S + YEP
Sbjct: 69 KDDAVIAINKIIKELQEAGMDIIDNPEVNVQNMVATTELGMEPNLDDI--STLECTEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YR+ PK+V+LIF SGK+VITG K D+ Y AF I L E +
Sbjct: 127 EQFPGLVYRLSDPKVVVLIFGSGKVVITGLKRIDDAYVAFNKILTTLKELEE 178
>gi|170291079|ref|YP_001737895.1| TATA-box binding family protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175159|gb|ACB08212.1| TATA-box binding family protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 211
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 2/171 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+VS+ ++ +LDL +I+ + + + Y+P++F ++++I EPK L+F+SGK VCTG
Sbjct: 34 AIQNVVSSADIRQRLDLHEISRRIKKSRYDPEKFPGLVLKIDEPKAALLLFSSGKFVCTG 93
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDF-KIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS ++S A ++QK G K + K +NIV S + + +E LA +
Sbjct: 94 TKSVEESAKAINAAIEVLQKHGIEVKGRPLIKAENIVASAKLHVKVDIERLALEL-ENTL 152
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
YEPE FPGLI+RMK P +V LIF SG +V TGAK + A + +L
Sbjct: 153 YEPEQFPGLIFRMKDPDVVFLIFASGSLVCTGAKKESDVRRAVYKLRDILA 203
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+NIV++ L K+D++++AL+ N Y P++F +I R+++P LIFASG +VCTGAK
Sbjct: 127 ENIVASAKLHVKVDIERLALELENTLYEPEQFPGLIFRMKDPDVVFLIFASGSLVCTGAK 186
Query: 77 SEQQSKLAARKYARIIQKLGF 97
E + A K I+ + G+
Sbjct: 187 KESDVRRAVYKLRDILARKGY 207
>gi|449545513|gb|EMD36484.1| hypothetical protein CERSUDRAFT_95784 [Ceriporiopsis subvermispora
B]
Length = 154
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 89/148 (60%), Gaps = 28/148 (18%)
Query: 53 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 112
MR+ + K LIF SGK+V TGAKSE + LA+RK ARI+QKL F F + KIQN +GS
Sbjct: 1 MRVCDLKMAVLIFVSGKLVVTGAKSEDNTCLASRKSARIVQKLEFDPNFSELKIQNTMGS 60
Query: 113 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKV---- 168
D FSS+EPELFPGL Y M +PK+VLLIF+S +V+T AKV
Sbjct: 61 RD----------------FSSFEPELFPGLTYSMIKPKVVLLIFMSRMVVLTRAKVHIFY 104
Query: 169 --------RDETYTAFENIYPVLTEFRK 188
R+E YTA IY VL EF++
Sbjct: 105 YWEASSPGREEIYTALTTIYTVLYEFQE 132
>gi|452207289|ref|YP_007487411.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
gi|452083389|emb|CCQ36681.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
Length = 187
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ ++D +L L +A+ ++Y+P F +I R +EP+ LIF SGK+VCTG
Sbjct: 9 DIENVVASTDIDQELALDSLAMDLSGSDYDPDNFPGLIYRTQEPQAANLIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
A + + + ++ LG + +QNIV S D++ + L +A G
Sbjct: 69 ANTVDDVHSSLQIVCETLRDLGIDVIEAPTITVQNIVSSADLRAQLNLNAIAIGFGLEDV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
YEPE FPGL+YR+ P +V L+F SGK+VITGAK D A + + L+E V
Sbjct: 129 EYEPEQFPGLVYRLDTPDVVTLLFGSGKVVITGAKTPDAAEEALKKVSGELSELGLVD 186
>gi|332797079|ref|YP_004458579.1| TATA-like box binding protein, TBP [Acidianus hospitalis W1]
gi|332694814|gb|AEE94281.1| archaeal TATA-like box binding protein, TBP [Acidianus hospitalis
W1]
Length = 167
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Query: 40 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPA 99
N EY+P +F +I R+ PK T+LIF SGKMV TGAKS ++ A ++ + ++K G
Sbjct: 7 NVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKTLKKYGIKI 66
Query: 100 KFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K +IQNIV S ++ + L+ A+ + YEPE FPGLI+RM P++VLLIF S
Sbjct: 67 TGKPKIQIQNIVASANMHVHVNLDKAAFLLEN-NMYEPEQFPGLIFRMDDPRVVLLIFSS 125
Query: 159 GKIVITGAKVRDETYTAFENIYPVLTEF 186
GK+VITGAK +E Y A + I+ L E
Sbjct: 126 GKMVITGAKREEEVYKAVKKIFDKLNEL 153
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ N+ ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TGA
Sbjct: 74 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 133
Query: 76 KSEQQSKLAARK 87
K E++ A +K
Sbjct: 134 KREEEVYKAVKK 145
>gi|256087298|ref|XP_002579809.1| TATA-binding protein-related [Schistosoma mansoni]
gi|238665296|emb|CAZ36048.1| TATA-binding protein-related [Schistosoma mansoni]
Length = 738
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 3/169 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
S+ N+V +L C L LK+IA + N EY + VIMR+R P T A I++SGK+ CTG
Sbjct: 66 SITNVVVMASLQCHLRLKEIARTSVNVEYKALQ-NHVIMRLRSPYTVATIWSSGKIWCTG 124
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
A S ++K+ AR+ AR I K GFP F +++ NI+ +C + F +RLE L SY
Sbjct: 125 ANSLAKAKIGARRIARRIAKCGFPCHFSKYRVVNIMATCKLPFGVRLEELVKERPMQMSY 184
Query: 135 EPELFPGLIYRMK-QPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPV 182
EPEL PGL ++ L +F +G+IVI G+ + D + E + P+
Sbjct: 185 EPELAPGLTFKTDINSSTSLKLFSTGRIVIMGSSL-DSIGSLVEELVPI 232
>gi|73668595|ref|YP_304610.1| transcription factor [Methanosarcina barkeri str. Fusaro]
gi|72395757|gb|AAZ70030.1| TATA binding protein of transcription factor TFIID [Methanosarcina
barkeri str. Fusaro]
Length = 184
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ L DL+KI + AEYN +F ++ R PK LIF SGK+VCTG
Sbjct: 6 TVENVVASTTLAEDFDLQKIEARLEKAEYNKAKFPGLVYRTENPKAAFLIFTSGKVVCTG 65
Query: 75 AKSEQQSKLAARKYARIIQKLGFP--AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AK+ +K+A A ++ +G D IQNIV + D++ + L + + G +
Sbjct: 66 AKTVDNAKMAIINLASTLKSIGCEKINPEPDVHIQNIVATADLETNLNLNTIVIAFGMEN 125
Query: 133 -SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE+FPGL+YR++ P++V+LIF SGK+VITG K
Sbjct: 126 VEYEPEVFPGLVYRLEDPRVVVLIFSSGKLVITGGK 161
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKI--ALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++NIV+T +L+ L+L I A N EY P+ F ++ R+ +P+ LIF+SGK+V T
Sbjct: 99 IQNIVATADLETNLNLNTIVIAFGMENVEYEPEVFPGLVYRLEDPRVVVLIFSSGKLVIT 158
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G KS + + R + LG
Sbjct: 159 GGKSPEDCEEGLRVIKKEFDNLGL 182
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 15/85 (17%)
Query: 106 IQNIVGSCDV-------KFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
++N+V S + K RLE Y+ F PGL+YR + PK LIF S
Sbjct: 7 VENVVASTTLAEDFDLQKIEARLEKAEYNKAKF--------PGLVYRTENPKAAFLIFTS 58
Query: 159 GKIVITGAKVRDETYTAFENIYPVL 183
GK+V TGAK D A N+ L
Sbjct: 59 GKVVCTGAKTVDNAKMAIINLASTL 83
>gi|10803661|ref|NP_046059.1| transcription factor [Halobacterium sp. NRC-1]
gi|169237306|ref|YP_001690512.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
gi|169237349|ref|YP_001690554.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
gi|14423947|sp|O52018.1|TBPD_HALSA RecName: Full=TATA-box-binding protein D; AltName: Full=Box
A-binding protein D; Short=BAP D; AltName: Full=TATA
sequence-binding protein D; Short=TBP D; AltName:
Full=TATA-box factor D
gi|2822392|gb|AAC82898.1| TbpD [Halobacterium sp. NRC-1]
gi|167728372|emb|CAP15175.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
gi|167728865|emb|CAP15756.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
Length = 186
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ +L +L L+++A AEYNP F VI R+ +PK+ LIF SGK VCTGA
Sbjct: 10 IENVVASTDLSQELALEQLATDLPGAEYNPGDFPGVIYRLDDPKSATLIFDSGKAVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
+S A ++ LG +QNIV S + + L +A G
Sbjct: 70 QSVDDVHDAISIVVEDLRDLGIDIPPSPPVHVQNIVCSGSLDQDLNLNAIAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V+L+F SGK+VITG D+ + A E I+ LT+
Sbjct: 130 YEPEQFPGLVYRLNDPDVVVLLFGSGKLVITGGSNPDDAHHALEIIHERLTDL 182
>gi|335441192|ref|ZP_08561913.1| transcription factor [Halorhabdus tiamatea SARL4B]
gi|334888363|gb|EGM26662.1| transcription factor [Halorhabdus tiamatea SARL4B]
Length = 186
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + + ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLQIVFGKLRDLNIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K D+ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKIVSRLEEL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K +K A K +++LG
Sbjct: 161 GGKEPDDAKKAVDKIVSRLEELGL 184
>gi|448488858|ref|ZP_21607457.1| transcription factor [Halorubrum californiensis DSM 19288]
gi|445695479|gb|ELZ47582.1| transcription factor [Halorubrum californiensis DSM 19288]
Length = 186
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 10 TVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + + ++ L P + +QNIV S D+ + L +A G
Sbjct: 70 ANSIEAVHESLDIVFAELRALQIPIEDPKITVQNIVTSADLGESLNLNAIAIGLGLEHIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ P++V L+F SGK+V+TG D+ A + I
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKVVVTGGTTPDDAAAAVDVI 175
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ +P+ AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDDPEVVALLFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG + + A + LG
Sbjct: 160 TGGTTPDDAAAAVDVIVEELNGLGL 184
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
++N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 9 ITVENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 66
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA + + + + ++ E R +Q
Sbjct: 67 CTGANSIEAVHESLDIVF---AELRALQ 91
>gi|448406902|ref|ZP_21573334.1| transcription factor [Halosimplex carlsbadense 2-9-1]
gi|445676708|gb|ELZ29225.1| transcription factor [Halosimplex carlsbadense 2-9-1]
Length = 186
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R ++ L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRDLNIQVDDDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P +V L+F SGK+VITG K ++ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKQPEDAEEAVDKIVSRLEDL 182
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKQPEDAEEAVDKIVSRLEDLGL 184
>gi|389852335|ref|YP_006354569.1| transcription factor (TATA-box-binding protein) [Pyrococcus sp.
ST04]
gi|388249641|gb|AFK22494.1| transcription factor (TATA-box-binding protein) [Pyrococcus sp.
ST04]
Length = 191
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
KS Q + R A+++QKL G KF+ IQN+V S D+ L+ +A +
Sbjct: 71 KSVQDIE---RAVAKLVQKLKGIGVKFRRAPQIDIQNMVFSGDIGREFNLDNVALTL-PN 126
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+++P+ V+L+F SGKIV +GAK A+E + +L E K
Sbjct: 127 CEYEPEQFPGVIYRVREPRAVILLFSSGKIVCSGAK---SEADAWEAVRKLLRELEK 180
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R+REP+ L+F+SGK+VC+G
Sbjct: 101 DIQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVREPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE + A RK R ++K G
Sbjct: 161 AKSEADAWEAVRKLLRELEKYGL 183
>gi|448451667|ref|ZP_21592967.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|448483665|ref|ZP_21605812.1| transcription factor [Halorubrum arcis JCM 13916]
gi|448514240|ref|ZP_21616992.1| transcription factor [Halorubrum distributum JCM 9100]
gi|448526080|ref|ZP_21619698.1| transcription factor [Halorubrum distributum JCM 10118]
gi|445692908|gb|ELZ45077.1| transcription factor [Halorubrum distributum JCM 9100]
gi|445699280|gb|ELZ51311.1| transcription factor [Halorubrum distributum JCM 10118]
gi|445810523|gb|EMA60548.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|445820680|gb|EMA70489.1| transcription factor [Halorubrum arcis JCM 13916]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 10 TVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + + ++ L P + + +QNIV S D+ + L +A G
Sbjct: 70 ANSIEAVHESLDIVFDELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P++V L+F SGK+V+TG ++ A + I
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKVVVTGGTSPEDAAAAVDVI 175
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP+ AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPEVVALLFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG S + + A + LG
Sbjct: 160 TGGTSPEDAAAAVDVIVEELNGLGL 184
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
++N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 9 ITVENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 66
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA + + + + ++ E R +Q
Sbjct: 67 CTGANSIEAVHESLDIVF---DELRALQ 91
>gi|16081349|ref|NP_393677.1| transcription factor [Thermoplasma acidophilum DSM 1728]
gi|14423941|sp|Q9HLM8.1|TBP_THEAC RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|10639343|emb|CAC11345.1| probable TATA-box binding protein (TFIID homolog) [Thermoplasma
acidophilum]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 110/184 (59%), Gaps = 19/184 (10%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIV++ +L LDL +IAL +EY P++F +I R++EPKT LIF SGK+ CTG
Sbjct: 8 TIENIVASTSLAEHLDLSRIALALDGSEYEPEQFPGLIYRLQEPKTAVLIFRSGKVNCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFK--------IQNIVGSCDVKFPIRLEGLAY 126
AK+ + K R II KL K D + +QNIV D++ + L +A
Sbjct: 68 AKNIEDVK---RTIKIIIDKL----KAADIEVYDDPQIIVQNIVAVYDLESELNLTDIAM 120
Query: 127 SHGAFS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTE 185
S G + YEPE FPGL+YR+++P++VLL+F SGK+V TGAK E A + V E
Sbjct: 121 SLGLENVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVCTGAKEESEIEQA---VIKVKKE 177
Query: 186 FRKV 189
+KV
Sbjct: 178 LQKV 181
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L+ +L+L IA L N EY P++F ++ R+ EP+ L+F SGK+VCT
Sbjct: 100 VQNIVAVYDLESELNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVCT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK E + + A K + +QK+G
Sbjct: 160 GAKEESEIEQAVIKVKKELQKVGL 183
>gi|399576129|ref|ZP_10769886.1| transcription factor [Halogranum salarium B-1]
gi|399238840|gb|EJN59767.1| transcription factor [Halogranum salarium B-1]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L + + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLNIVFDKLRELKIQVEDDPEITVQNIVTSADLGKNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +PK+V L+F SGK+VITG K ++ A E I L+E
Sbjct: 129 EYEPEQFPGLVYRLDEPKVVALLFGSGKLVITGGKKPEDAKHAVEVITERLSEL 182
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ EPK AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGKNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPKVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K + +K A + +LG
Sbjct: 160 TGGKKPEDAKHAVEVITERLSELGL 184
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLNIVFDKLRELK 90
>gi|294496460|ref|YP_003542953.1| TATA binding protein of transcription factor TFIID
[Methanohalophilus mahii DSM 5219]
gi|292667459|gb|ADE37308.1| TATA binding protein of transcription factor TFIID
[Methanohalophilus mahii DSM 5219]
Length = 183
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L + DL KI + AEYN ++F ++ R+ PK L+F SGK+VCTGA
Sbjct: 8 IENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSNPKAAFLVFTSGKVVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
K+ A+ + +G K D +QNIV S D+K + L +A G +
Sbjct: 68 KNVDDVHTVIADMAKKLNGIGIDTLEKPDITVQNIVASADLKAVLNLNAIAIGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +PK+V+LIF SGK+V+TG K
Sbjct: 128 YEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGK 161
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ RI EPK LIF+SGK+V
Sbjct: 98 TVQNIVASADLKAVLNLNAIAIGLGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVV 157
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG KS + + + + +G
Sbjct: 158 TGGKSPENCEEGVEVVRQQLDNMGL 182
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGL-AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ KI+N+V S + L + A GA Y + FPGL+YR+ PK L+F SGK+
Sbjct: 5 NIKIENVVASTKLAEEFDLTKIEAEFEGA--EYNKQKFPGLVYRVSNPKAAFLVFTSGKV 62
Query: 162 VITGAKVRDETYTAFENI 179
V TGAK D+ +T ++
Sbjct: 63 VCTGAKNVDDVHTVIADM 80
>gi|448611222|ref|ZP_21661856.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445743654|gb|ELZ95135.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 189
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R ++PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG-AFS 132
AKS + +++L P + +QNIV S D+ + L +A G
Sbjct: 69 AKSTDGVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLEHI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+VITG K + A + I L++
Sbjct: 129 EYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPQDAEDAVDVIMSRLSDL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV T
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQDPKSAALIFRSGKIVCT 67
Query: 165 GAKVRDETYTAFENIYPVLTEFR 187
GAK D + + E ++ L E +
Sbjct: 68 GAKSTDGVHESLEIVFDKLRELQ 90
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGENLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K Q ++ A + LG
Sbjct: 160 TGGKKPQDAEDAVDVIMSRLSDLGL 184
>gi|448577353|ref|ZP_21642983.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445727998|gb|ELZ79607.1| transcription factor [Haloferax larsenii JCM 13917]
Length = 188
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ ++ AE+NP F ++ R ++P+ LIF SGK+VCTGA
Sbjct: 12 IQNVVASSAVGLELDLESLSDDVPGAEFNPDNFPGLVYRTQDPRAANLIFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
S + A + + LG P + + +QNIV S D+ + L LA G
Sbjct: 72 SSVDEVNQALEQVFEELGSLGIPIDGREEATVQNIVSSADLGTTLNLNALAIGLGLEHVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK
Sbjct: 132 YEPEQFPGLVYRIDEPNVVVLLFGSGKIVITGAK 165
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 99 AKFKDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFV 157
A+ +IQN+V S V + LE L+ GA + P+ FPGL+YR + P+ LIF
Sbjct: 5 ARLDSLEIQNVVASSAVGLELDLESLSDDVPGA--EFNPDNFPGLVYRTQDPRAANLIFR 62
Query: 158 SGKIVITGAKVRDETYTAFENIYPVL 183
SGKIV TGA DE A E ++ L
Sbjct: 63 SGKIVCTGASSVDEVNQALEQVFEEL 88
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++V+NIVS+ +L L+L +A L + EY P++F ++ RI EP L+F SGK+V
Sbjct: 101 ATVQNIVSSADLGTTLNLNALAIGLGLEHVEYEPEQFPGLVYRIDEPNVVVLLFGSGKIV 160
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + ++ A + I+ LG
Sbjct: 161 ITGAKKVEYAREAINVVSDEIESLGL 186
>gi|389861732|ref|YP_006363972.1| transcription factor [Thermogladius cellulolyticus 1633]
gi|388526636|gb|AFK51834.1| transcription factor [Thermogladius cellulolyticus 1633]
Length = 210
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
+ ++NIV+TV L+ +DL + + N + P +F +I R+ +PK TALIF SGKMV T
Sbjct: 26 TRIENIVATVILEHGIDLDLLESKIPNITFRPDQFPGLIFRLDKPKATALIFRSGKMVVT 85
Query: 74 GAKSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
G KS + ++ RI+ + G K +IQNIV S D+ + LE AY S
Sbjct: 86 GTKSTNELIEVVKRMIRILARHGIRITGKPRIQIQNIVASGDIHALVNLERAAYMLED-S 144
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
YEPE FPGLI+RM++P++VLLIF SGK+VITG
Sbjct: 145 MYEPEQFPGLIHRMREPRVVLLIFSSGKMVITG 177
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV++ ++ ++L++ A ++ Y P++F +I R+REP+ LIF+SGKMV TG
Sbjct: 118 QIQNIVASGDIHALVNLERAAYMLEDSMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITG 177
Query: 75 AKSEQQSKLAARKYARIIQKLG 96
AK E++ + AA+K A+ + LG
Sbjct: 178 AKEEKEVEEAAKKIAQELTDLG 199
>gi|330834362|ref|YP_004409090.1| transcription factor [Metallosphaera cuprina Ar-4]
gi|329566501|gb|AEB94606.1| transcription factor [Metallosphaera cuprina Ar-4]
Length = 167
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Query: 40 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPA 99
N EY+P +F +I R+ PK T+LIF SGKMV TGAKS ++ A ++ + +++ G
Sbjct: 7 NVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRYGIRI 66
Query: 100 KFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K +IQNIV S ++ + L+ A+ + YEPE FPGLI+RM P++VLLIF S
Sbjct: 67 GGKPKIQIQNIVASANMHVHVNLDKAAFLLEN-NMYEPEQFPGLIFRMDDPRVVLLIFSS 125
Query: 159 GKIVITGAKVRDETYTAFENIYPVLTEF 186
GK+VITGAK DE Y A + I+ L E
Sbjct: 126 GKMVITGAKREDEVYKAVKKIFDKLEEL 153
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ N+ ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TGA
Sbjct: 74 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 133
Query: 76 KSEQQSKLAARKYARIIQKL 95
K E + A +K +++L
Sbjct: 134 KREDEVYKAVKKIFDKLEEL 153
>gi|13542225|ref|NP_111913.1| transcription factor [Thermoplasma volcanium GSS1]
gi|24638241|sp|Q978J5.1|TBP_THEVO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|14325659|dbj|BAB60562.1| TATA-binding protein [TBP] [Thermoplasma volcanium GSS1]
Length = 184
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 108/180 (60%), Gaps = 11/180 (6%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++NIV++ +L LDL +IAL +EY P++F +I R+++PKT LIF SGK+ CTG
Sbjct: 8 TIENIVASTSLAEHLDLSRIALALDGSEYEPEQFPGLIYRLQDPKTAVLIFRSGKVNCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA----KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
AK+ + K R II KL D +QNIV D++ + L +A S G
Sbjct: 68 AKNIEDVK---RTIKIIIDKLKAANIEVYDDPDIIVQNIVAVYDLESELNLTDIAMSLGL 124
Query: 131 FS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
+ YEPE FPGL+YR+++P++VLL+F SGK+V TGAK E A + V E +KV
Sbjct: 125 ENVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVCTGAKEESEIEQA---VIKVKKELQKV 181
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV+ +L+ +L+L IA L N EY P++F ++ R+ EP+ L+F SGK+VCT
Sbjct: 100 VQNIVAVYDLESELNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVCT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
GAK E + + A K + +QK+G
Sbjct: 160 GAKEESEIEQAVIKVKKELQKVGL 183
>gi|448620717|ref|ZP_21667964.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445756678|gb|EMA08044.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 188
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ ++ AE+NP F ++ R +EPK LIF SGK+VCTGA
Sbjct: 12 IQNVVASSAIGQELDLESLSNDVTGAEFNPDNFPGLVYRTQEPKAANLIFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
S A + + LG P + + +QNIV S D+ + L LA G +
Sbjct: 72 SSIDGVNRALDQVFEELGSLGIPIDNREEATVQNIVSSADLGTTLNLNALAIGLGLENVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P +V+L+F SGKIVITGAK
Sbjct: 132 YEPEQFPGLVYRIDEPNVVVLLFGSGKIVITGAK 165
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++V+NIVS+ +L L+L +A L N EY P++F ++ RI EP L+F SGK+V
Sbjct: 101 ATVQNIVSSADLGTTLNLNALAIGLGLENVEYEPEQFPGLVYRIDEPNVVVLLFGSGKIV 160
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + ++ A + + I LG
Sbjct: 161 ITGAKKVEFAREAIQVVSDEIDSLGL 186
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 100 KFKDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
+ + +IQN+V S + + LE L+ GA + P+ FPGL+YR ++PK LIF S
Sbjct: 6 RLESLEIQNVVASSAIGQELDLESLSNDVTGA--EFNPDNFPGLVYRTQEPKAANLIFRS 63
Query: 159 GKIVITGAKVRDETYTAFENIYPVL 183
GKIV TGA D A + ++ L
Sbjct: 64 GKIVCTGASSIDGVNRALDQVFEEL 88
>gi|448462784|ref|ZP_21597843.1| transcription factor [Halorubrum kocurii JCM 14978]
gi|445818005|gb|EMA67873.1| transcription factor [Halorubrum kocurii JCM 14978]
Length = 185
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + ++ L P + + +QNIV S D+ + L +A G
Sbjct: 69 ANSIDAVHESLALVFDELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V L+F SGK+V+TG D+ A + I
Sbjct: 129 YEPEQFPGLVYRIDEPDVVALLFGSGKLVVTGGTSPDDAAAAVDVI 174
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ RI EP AL+F SGK+V
Sbjct: 99 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRIDEPDVVALLFGSGKLVV 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG S + A + LG
Sbjct: 159 TGGTSPDDAAAAVDVIVEELDGLGL 183
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 8 ITIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA D + E++ V E R +Q
Sbjct: 66 CTGANSIDAVH---ESLALVFDELRALQ 90
>gi|15791061|ref|NP_280885.1| transcription factor [Halobacterium sp. NRC-1]
gi|169236811|ref|YP_001690011.1| transcription factor [Halobacterium salinarum R1]
gi|14423951|sp|Q9HN56.1|TBPE_HALSA RecName: Full=TATA-box-binding protein E; AltName: Full=Box
A-binding protein E; Short=BAP E; AltName: Full=TATA
sequence-binding protein E; Short=TBP E; AltName:
Full=TATA-box factor E
gi|10581658|gb|AAG20365.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
gi|167727877|emb|CAP14665.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
Length = 186
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R ++PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELSIKVEDDPEIVVQNIVTSADLGRQLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P++V L+F SGK+VITG K + A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPKDAEHAVDKITSRLEEL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L +L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRQLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K +++LG
Sbjct: 161 GGKEPKDAEHAVDKITSRLEELGL 184
>gi|448593777|ref|ZP_21652677.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445728641|gb|ELZ80242.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 188
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ + +LDL+ ++ AE+NP F ++ R ++P+ LIF SGK+VCTGA
Sbjct: 12 IQNVVASSAVGQELDLESLSDDVAGAEFNPDNFPGLVYRTQDPRAANLIFRSGKIVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
S + A + + LG P + + +QNIV S D+ + L LA G
Sbjct: 72 SSVDEVNRALEQVFEELGSLGIPTDGREEATVQNIVSSADLGTTLNLNALAIGLGLEHVE 131
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ P +V+L+F SGKIVITGAK
Sbjct: 132 YEPEQFPGLVYRIDDPNVVVLLFGSGKIVITGAK 165
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 99 AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
A+ +IQN+V S V + LE L+ A + + P+ FPGL+YR + P+ LIF S
Sbjct: 5 ARLDSLEIQNVVASSAVGQELDLESLS-DDVAGAEFNPDNFPGLVYRTQDPRAANLIFRS 63
Query: 159 GKIVITGAKVRDETYTAFENIYPVL 183
GKIV TGA DE A E ++ L
Sbjct: 64 GKIVCTGASSVDEVNRALEQVFEEL 88
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 14 SSVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
++V+NIVS+ +L L+L +A L + EY P++F ++ RI +P L+F SGK+V
Sbjct: 101 ATVQNIVSSADLGTTLNLNALAIGLGLEHVEYEPEQFPGLVYRIDDPNVVVLLFGSGKIV 160
Query: 72 CTGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + ++ A + I+ LG
Sbjct: 161 ITGAKKVEFAREAINVVSDEIESLGL 186
>gi|222481033|ref|YP_002567270.1| transcription factor [Halorubrum lacusprofundi ATCC 49239]
gi|222453935|gb|ACM58200.1| TATA-box binding family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 185
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + ++ L P + +QNIV S D+ + L +A G
Sbjct: 69 ANSIDAVHESLAIVFDELRGLQIPIDDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V L+F SGK+VITG D+ A + I
Sbjct: 129 YEPEQFPGLVYRIDEPDVVALLFGSGKLVITGGTSPDDAAAAVDVI 174
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ RI EP AL+F SGK+V
Sbjct: 99 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRIDEPDVVALLFGSGKLVI 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPA 99
TG S + A + LG A
Sbjct: 159 TGGTSPDDAAAAVDVIVEKLDGLGLLA 185
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 8 ITIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA D + E++ V E R +Q
Sbjct: 66 CTGANSIDAVH---ESLAIVFDELRGLQ 90
>gi|448578919|ref|ZP_21644278.1| transcription factor [Haloferax larsenii JCM 13917]
gi|448589307|ref|ZP_21649466.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445724847|gb|ELZ76474.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445735735|gb|ELZ87283.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 188
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L P + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLGIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+VITG K ++ A + I L++
Sbjct: 129 EYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPEDAAAAVDVIISRLSDL 182
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLGIVFDKLRELQ 90
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGENLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGFPAKF 101
TG K + + A + LG F
Sbjct: 160 TGGKKPEDAAAAVDVIISRLSDLGLLGSF 188
>gi|448316921|ref|ZP_21506499.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|445606151|gb|ELY60056.1| transcription factor [Natronococcus jeotgali DSM 18795]
Length = 186
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+ +N+V++ + + DL+ +A NA+Y+P F ++ R+ P++ LIF +GK+VCTG
Sbjct: 9 TTENVVASGDTGREFDLQALADDLNNAQYDPNTFPGIVYRMDNPQSAGLIFHTGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
AKS + +A +++LG + F IQNIV S D+ + L +A G
Sbjct: 69 AKSVEDINKSAETIFNALKQLGIAVEENPFTIQNIVSSADLGCSLNLNAVAIGLGLGQIE 128
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 175
YEPE FPGL+YR+ +P +V+L+F SGK VITG + TA
Sbjct: 129 YEPEQFPGLVYRLDKPDVVVLLFGSGKAVITGGTEIQDAATA 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 107 QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGA 166
+N+V S D L+ LA + Y+P FPG++YRM P+ LIF +GKIV TGA
Sbjct: 11 ENVVASGDTGREFDLQALADDLNN-AQYDPNTFPGIVYRMDNPQSAGLIFHTGKIVCTGA 69
Query: 167 KVRDETYTAFENIYPVLTEF 186
K ++ + E I+ L +
Sbjct: 70 KSVEDINKSAETIFNALKQL 89
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+++NIVS+ +L C L+L +A L EY P++F ++ R+ +P L+F SGK V
Sbjct: 99 TIQNIVSSADLGCSLNLNAVAIGLGLGQIEYEPEQFPGLVYRLDKPDVVVLLFGSGKAVI 158
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG Q + A ++ +G
Sbjct: 159 TGGTEIQDAATAVNVIISKLENVGL 183
>gi|312136408|ref|YP_004003745.1| tata binding protein of transcription factor tfiid [Methanothermus
fervidus DSM 2088]
gi|311224127|gb|ADP76983.1| TATA binding protein of transcription factor TFIID [Methanothermus
fervidus DSM 2088]
Length = 183
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 102/155 (65%), Gaps = 4/155 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV++ L +DL KI+ ++ +N K+F ++ ++ +PKT ALIF SGK+VCTG
Sbjct: 9 EIENIVASATLGRPIDLSKISKALKSVNFNRKQFPGLVYKLDKPKTAALIFGSGKLVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
AKS + S A + I+++ P + + KIQNIV S ++ P+ L+ +A + +
Sbjct: 69 AKSVEDSIKAIKTTVNKIREVDPDIPEDY-EIKIQNIVASANLSKPLNLDEIAMTL-ENT 126
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +PK+VLL+F SGK+V TGA+
Sbjct: 127 EYEPEQFPGLVYRLDKPKVVLLLFGSGKVVCTGAR 161
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ NL L+L +IA+ N EY P++F ++ R+ +PK L+F SGK+VCTGA
Sbjct: 101 IQNIVASANLSKPLNLDEIAMTLENTEYEPEQFPGLVYRLDKPKVVLLLFGSGKVVCTGA 160
Query: 76 KSEQQSKLAARKYARIIQKLGF 97
+ + +KL +K +++L
Sbjct: 161 RDPKDAKLGVKKTKERLKELNL 182
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
+ +I+NIV S + PI L ++ + + + + + FPGL+Y++ +PK LIF SGK+V
Sbjct: 7 EIEIENIVASATLGRPIDLSKISKALKSVN-FNRKQFPGLVYKLDKPKTAALIFGSGKLV 65
Query: 163 ITGAKVRDETYTAF 176
TGAK +++ A
Sbjct: 66 CTGAKSVEDSIKAI 79
>gi|448427036|ref|ZP_21583589.1| transcription factor [Halorubrum terrestre JCM 10247]
gi|445679083|gb|ELZ31564.1| transcription factor [Halorubrum terrestre JCM 10247]
Length = 186
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 10 TVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + + ++ L P + + +QNIV S D+ + L +A G
Sbjct: 70 ANSIEAVHESLDIVFDELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P++V L+F SGK+V+TG + A + I
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKVVVTGGTTPADAEAAVDVI 175
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP+ AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPEVVALLFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG + ++ A + LG
Sbjct: 160 TGGTTPADAEAAVDVIVEELNGLGL 184
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
++N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 9 ITVENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 66
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA + + + + ++ E R +Q
Sbjct: 67 CTGANSIEAVHESLDIVF---DELRALQ 91
>gi|332159172|ref|YP_004424451.1| transcription factor [Pyrococcus sp. NA2]
gi|331034635|gb|AEC52447.1| transcription factor [Pyrococcus sp. NA2]
Length = 191
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 109/177 (61%), Gaps = 11/177 (6%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
KS Q + A A++IQKL G KFK IQN+V S D+ L+ +A +
Sbjct: 71 KSIQDIEKAV---AKLIQKLKGIGVKFKRAPLIDIQNMVFSGDLGREFNLDNVALTLPN- 126
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K P+ V+L+F SGKIV +GAK A+E + +L E K
Sbjct: 127 CEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGAK---SEADAWEAVRKLLRELEK 180
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + +L + +L +AL N EY P++F VI R+++P+ L+F+SGK+VC+G
Sbjct: 101 DIQNMVFSGDLGREFNLDNVALTLPNCEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE + A RK R ++K G
Sbjct: 161 AKSEADAWEAVRKLLRELEKYGL 183
>gi|337284406|ref|YP_004623880.1| transcription factor [Pyrococcus yayanosii CH1]
gi|334900340|gb|AEH24608.1| transcription factor [Pyrococcus yayanosii CH1]
Length = 191
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 108/174 (62%), Gaps = 5/174 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVIEICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKDF-KIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
KS + + A K ++++ +G K IQN+V S D+ L+ +A S Y
Sbjct: 71 KSVEDIERAVGKLVQMLKGIGVSFKRAPLIDIQNMVFSGDIGREFNLDTVALSL-PNCEY 129
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 130 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAK---SEHDAWEAVRKLLRELEK 180
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R++EP+ L+F+SGK+VC+G
Sbjct: 101 DIQNMVFSGDIGREFNLDTVALSLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE + A RK R ++K G
Sbjct: 161 AKSEHDAWEAVRKLLRELEKYGL 183
>gi|134046443|ref|YP_001097928.1| transcription factor [Methanococcus maripaludis C5]
gi|132664068|gb|ABO35714.1| TATA binding protein of transcription factor TFIID [Methanococcus
maripaludis C5]
Length = 181
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ +PK LIF SGK+ CTGAK
Sbjct: 9 NVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGAKC 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++ + +A K + +++ G + +QN+V + ++ L+ + S + YEP
Sbjct: 69 KEDAVIAINKITKELKEAGMDLIDNPEVNVQNMVATTELGMEPNLDDI--STLECTEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YR+ PK+V+LIF SGK+VITG KV ++ Y A+E I L E +
Sbjct: 127 EQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYRAYEKISKTLKELEE 178
>gi|435850312|ref|YP_007311898.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanomethylovorans hollandica DSM 15978]
gi|433660942|gb|AGB48368.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanomethylovorans hollandica DSM 15978]
Length = 183
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L + DL KI + AEYN ++F ++ R+ EPK L+F SGK+VCTGA
Sbjct: 8 IENVVASTKLADEFDLTKIEAEFEGAEYNKQKFPGLVYRVSEPKAAFLVFTSGKVVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
K+ A+ + ++G K + +QNIV S D+ + L +A G +
Sbjct: 68 KNVADVHTVISNMAKKLNEIGIKTIKEPEITVQNIVASADLHAVLNLNAIAIGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 177
YEPE FPGL+YR+ +PK+V+LIF SGK+V+TG K + E
Sbjct: 128 YEPEQFPGLVYRIDKPKVVVLIFSSGKLVVTGGKTPENCAEGVE 171
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ RI +PK LIF+SGK+V
Sbjct: 98 TVQNIVASADLHAVLNLNAIAIGLGLENIEYEPEQFPGLVYRIDKPKVVVLIFSSGKLVV 157
Query: 73 TGAKSEQQ 80
TG K+ +
Sbjct: 158 TGGKTPEN 165
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGL-AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ KI+N+V S + L + A GA Y + FPGL+YR+ +PK L+F SGK+
Sbjct: 5 NIKIENVVASTKLADEFDLTKIEAEFEGA--EYNKQKFPGLVYRVSEPKAAFLVFTSGKV 62
Query: 162 VITGAKVRDETYTAFENIYPVLTEF 186
V TGAK + +T N+ L E
Sbjct: 63 VCTGAKNVADVHTVISNMAKKLNEI 87
>gi|159905083|ref|YP_001548745.1| transcription factor [Methanococcus maripaludis C6]
gi|226703561|sp|A9A840.1|TBP_METM6 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|159886576|gb|ABX01513.1| TATA-box binding family protein [Methanococcus maripaludis C6]
Length = 181
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 18 NIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS 77
N+V + + +DL+ A NAEY P++F ++ R+ EPK LIF SGK+ CTGAK
Sbjct: 9 NVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGKLNCTGAKC 68
Query: 78 EQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 136
++ + +A K + +++ G + +QN+V + ++ L+ + S + YEP
Sbjct: 69 KEDAVIAIHKIIKELKEAGMDLIDNPEVNVQNMVATTELGMEPNLDDI--STLECTEYEP 126
Query: 137 ELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
E FPGL+YR+ PK+V+LIF SGK+VITG KV ++ Y A++ I L E +
Sbjct: 127 EQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYKAYDKISKTLKELEE 178
>gi|433591131|ref|YP_007280627.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|448334667|ref|ZP_21523835.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|433305911|gb|AGB31723.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|445619396|gb|ELY72936.1| transcription factor [Natrinema pellirubrum DSM 15624]
Length = 186
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ ++ +L+L+ +A+ + A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTSIGQELELESVAMDLKGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L K + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDAVHESLHIVFDKLRELQIQVEKNPEIIVQNIVSSADLGRTLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ QP++V L+F SGK+V+TG K D+ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDQPEVVALLFGSGKLVVTGGKKGDDAKQAVDVITTRLEEL 182
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGK 160
+ I+N+V S + + LE +A GA Y+PE FPGL+YR + PK LIF SGK
Sbjct: 6 ESINIENVVASTSIGQELELESVAMDLKGA--DYDPEQFPGLVYRTQNPKSAALIFRSGK 63
Query: 161 IVITGAKVRDETYTAFENIYPVLTEFRKVQ 190
IV TGAK D + E+++ V + R++Q
Sbjct: 64 IVCTGAKSTDAVH---ESLHIVFDKLRELQ 90
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIVS+ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVSSADLGRTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDQPEVVALLFGSGKLVVT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K +K A +++LG
Sbjct: 161 GGKKGDDAKQAVDVITTRLEELGL 184
>gi|119719211|ref|YP_919706.1| TATA-box binding [Thermofilum pendens Hrk 5]
gi|119524331|gb|ABL77703.1| TATA binding protein of transcription factor TFIID [Thermofilum
pendens Hrk 5]
Length = 142
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 52 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKD-FKIQNIV 110
++R+ PKT LIF+SGKMVCTGAKSE + + A + ++++ G K + ++QNIV
Sbjct: 1 MLRLTRPKTATLIFSSGKMVCTGAKSEAEVQKAVKSIIKLLKAHGIDIKNEPVIEVQNIV 60
Query: 111 GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRD 170
S ++K + LE A+ S YEPE FPGLIYRM+ PK+VLLIF SGK+V TGAK +
Sbjct: 61 ASANLKASVDLERAAFLL-ENSMYEPEQFPGLIYRMQDPKVVLLIFSSGKVVCTGAKKEE 119
Query: 171 ETYTAFENIYPVLTE 185
E A E IY +L E
Sbjct: 120 EVKRAVEKIYNILKE 134
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 13 VSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
V V+NIV++ NL +DL++ A N+ Y P++F +I R+++PK LIF+SGK+VC
Sbjct: 53 VIEVQNIVASANLKASVDLERAAFLLENSMYEPEQFPGLIYRMQDPKVVLLIFSSGKVVC 112
Query: 73 TGAKSEQQSKLAARKYARIIQKLG 96
TGAK E++ K A K I+++ G
Sbjct: 113 TGAKKEEEVKRAVEKIYNILKEQG 136
>gi|88601869|ref|YP_502047.1| transcription factor [Methanospirillum hungatei JF-1]
gi|88187331|gb|ABD40328.1| TATA binding protein of transcription factor TFIID
[Methanospirillum hungatei JF-1]
Length = 186
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL +IA ++AEYN KRF V++R++ PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKISESLDLPQIASSIKDAEYNKKRFPGVVIRMQNPKIAALVFGSGKVVLTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + +++ L A +KIQNIV S D+ I L +A
Sbjct: 71 KSVESLNKGLEILGDLLRSLNIEIASELTYKIQNIVTSADLGSGINLNKIAVGFNLERIE 130
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR++ PK+V+L+F SGK++ITG K
Sbjct: 131 YEPEQFPGLVYRLEDPKVVVLLFGSGKLIITGGK 164
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++NIV++ +L ++L KIA+ EY P++F ++ R+ +PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLGSGINLNKIAVGFNLERIEYEPEQFPGLVYRLEDPKVVVLLFGSGKLIIT 161
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + +K A K ++ LG
Sbjct: 162 GGKEPEDAKKAVLKIVDDLKGLGL 185
>gi|448433649|ref|ZP_21585976.1| transcription factor [Halorubrum tebenquichense DSM 14210]
gi|445686241|gb|ELZ38577.1| transcription factor [Halorubrum tebenquichense DSM 14210]
Length = 186
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 10 TVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTADPKSAALIFRSGKIVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + + ++ L P + + +QNIV S D+ + L +A G
Sbjct: 70 ANSIEAVHGSLDIVFEELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGA 166
YEPE FPGL+YR+ +P++V L+F SGK+V+TG
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKVVVTGG 162
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP+ AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPEVVALLFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG S ++ A + LG
Sbjct: 160 TGGTSPADAEAAVDVIVEELNGLGL 184
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
++N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 9 ITVENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTADPKSAALIFRSGKIV 66
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA + + + + ++ E R +Q
Sbjct: 67 CTGANSIEAVHGSLDIVF---EELRALQ 91
>gi|448349348|ref|ZP_21538190.1| transcription factor [Natrialba taiwanensis DSM 12281]
gi|445640591|gb|ELY93678.1| transcription factor [Natrialba taiwanensis DSM 12281]
Length = 186
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ +D +L+L+++ A+YNP+ F ++ R +EPK ALIF SGK+VCTGA
Sbjct: 10 IENVVASTGIDQELNLEQVGDDLPEADYNPEHFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
SE + + +++ LG + ++QNIV S D L +A G
Sbjct: 70 SSEPAVRESLSIVFEVLRGLGIDIPESPTIEVQNIVASIDFGSQFNLNAIAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P V L+F SGK +ITGAK D A + LT+
Sbjct: 130 YEPEQFPGLVYRLDDPSAVALLFGSGKAIITGAKTTDAVTHATNAVETRLTDL 182
>gi|448536157|ref|ZP_21622402.1| transcription factor [Halorubrum hochstenium ATCC 700873]
gi|445702600|gb|ELZ54544.1| transcription factor [Halorubrum hochstenium ATCC 700873]
Length = 186
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 10 TVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTADPKSAALIFRSGKIVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + + ++ L P + + +QNIV S D+ + L +A G
Sbjct: 70 ANSIEAVHGSLDIVFEELRALQIPIEDPEITVQNIVTSADLGKSLNLNAIAIGLGLEHIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGA 166
YEPE FPGL+YR+ +P++V L+F SGK+V+TG
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKVVVTGG 162
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP+ AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGKSLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPEVVALLFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG S ++ A + LG
Sbjct: 160 TGGTSPADAEAAVDVIVEELNGLGL 184
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
++N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 9 ITVENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTADPKSAALIFRSGKIV 66
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA + + + + ++ E R +Q
Sbjct: 67 CTGANSIEAVHGSLDIVF---EELRALQ 91
>gi|2392146|pdb|1AIS|A Chain A, Tata-Binding ProteinTRANSCRIPTION FACTOR (II)BTATA-Box
Complex From Pyrococcus Woesei
Length = 182
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 6/174 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I + +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS Q + A K A+ ++ +G KFK +QN+V S D+ L+ +A +
Sbjct: 71 KSVQDIERAVAKLAQKLKSIG--VKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPG+IYR+K+PK V+L+F SGKIV +GAK + + A + L ++
Sbjct: 128 EYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKY 181
>gi|6573566|pdb|1D3U|A Chain A, Tata-Binding ProteinTRANSCRIPTION FACTOR (II)BBRE+TATA-
Box Complex From Pyrococcus Woesei
Length = 181
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 6/174 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I + +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS Q + A K A+ ++ +G KFK +QN+V S D+ L+ +A +
Sbjct: 71 KSVQDIERAVAKLAQKLKSIG--VKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPG+IYR+K+PK V+L+F SGKIV +GAK + + A + L ++
Sbjct: 128 EYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKY 181
>gi|409096743|ref|ZP_11216767.1| transcription factor [Thermococcus zilligii AN1]
Length = 191
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLNLEKVIEICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARII-QKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS K+ K ++ +K+G K IQN+V S D+ L+ +A S
Sbjct: 71 KSVDDIKMGVNKLIELLSKKVGTRFTKPPQIDIQNMVFSGDIGMEFNLDAVALSLPN-CE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
YEPE FPG+IYR+K PK V+L+F SGKIV +GAK ++ + A + + L ++ +++
Sbjct: 130 YEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSENDAWEAVKRLIRELEKYDLIEE 187
>gi|15921539|ref|NP_377208.1| transcription factor [Sulfolobus tokodaii str. 7]
Length = 166
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Query: 40 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPA 99
N EY+P +F +I R+ PK T+LIF SGKMV TGAKS + A ++ + +++ G
Sbjct: 7 NVEYDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKRYGMNL 66
Query: 100 KFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K +IQNIV S ++ + L+ A+ + YEPE FPGLIYRM+ P++VLLIF S
Sbjct: 67 TGKPKIQIQNIVASANLHVIVNLDKAAFLLEN-NMYEPEQFPGLIYRMEDPRVVLLIFSS 125
Query: 159 GKIVITGAKVRDETYTAFENIYPVLTEF 186
GK+VITGAK +E + A + I+ L E
Sbjct: 126 GKMVITGAKREEEVHKAVKKIFDKLVEL 153
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++NIV++ NL ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TG
Sbjct: 73 QIQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMEDPRVVLLIFSSGKMVITG 132
Query: 75 AKSEQQSKLAARK 87
AK E++ A +K
Sbjct: 133 AKREEEVHKAVKK 145
>gi|18977667|ref|NP_579024.1| transcription factor [Pyrococcus furiosus DSM 3638]
gi|397651790|ref|YP_006492371.1| transcription factor [Pyrococcus furiosus COM1]
gi|48429154|sp|P62000.1|TBP_PYRFU RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|48429155|sp|P62001.1|TBP_PYRWO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|1942573|pdb|1PCZ|A Chain A, Structure Of Tata-Binding Protein
gi|1942574|pdb|1PCZ|B Chain B, Structure Of Tata-Binding Protein
gi|498649|gb|AAA73447.1| TATA-binding protein [Pyrococcus woesei]
gi|1245168|gb|AAA93368.1| TATA-box binding protein [Pyrococcus furiosus]
gi|18893395|gb|AAL81419.1| transcription initiation factor TFIID (TATA-box factor) chain a
(TATA sequence-binding protein) (tbp) [Pyrococcus
furiosus DSM 3638]
gi|393189381|gb|AFN04079.1| transcription factor [Pyrococcus furiosus COM1]
Length = 191
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 6/174 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I + +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS Q + A K A+ ++ +G KFK +QN+V S D+ L+ +A +
Sbjct: 71 KSVQDIERAVAKLAQKLKSIG--VKFKRAPQIDVQNMVFSGDIGREFNLDVVALTL-PNC 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPG+IYR+K+PK V+L+F SGKIV +GAK + + A + L ++
Sbjct: 128 EYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKY 181
>gi|154150459|ref|YP_001404077.1| transcription factor [Methanoregula boonei 6A8]
gi|153999011|gb|ABS55434.1| TATA-box binding [Methanoregula boonei 6A8]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 105/177 (59%), Gaps = 7/177 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL +A + ++AEYN KRF V++R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDYLDLPALASKIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL--GFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
KS ++ L P K +KIQNIV S D+ I L +A
Sbjct: 71 KSVDSLSKGLTILGNQLRSLDIDIPKKLT-YKIQNIVTSADLATAINLNKIAVGFNLDRI 129
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPE FPGL+YR++ PK+V+L+F SGK++ITG K E A + + +L++ R +
Sbjct: 130 EYEPEQFPGLVYRLENPKVVVLLFGSGKLIITGGK---EPEDAKKAVVKILSDLRSL 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
++NIV++ +L ++L KIA+ EY P++F ++ R+ PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLATAINLNKIAVGFNLDRIEYEPEQFPGLVYRLENPKVVVLLFGSGKLIIT 161
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + +K A K ++ LG
Sbjct: 162 GGKEPEDAKKAVVKILSDLRSLGL 185
>gi|383619863|ref|ZP_09946269.1| transcription factor [Halobiforma lacisalsi AJ5]
gi|435849205|ref|YP_007311455.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
gi|448312598|ref|ZP_21502340.1| transcription factor [Natronolimnobius innermongolicus JCM 12255]
gi|448315726|ref|ZP_21505366.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|448401315|ref|ZP_21571551.1| transcription factor [Haloterrigena limicola JCM 13563]
gi|448696585|ref|ZP_21697997.1| transcription factor [Halobiforma lacisalsi AJ5]
gi|448708683|ref|ZP_21701101.1| transcription factor [Halobiforma nitratireducens JCM 10879]
gi|433675473|gb|AGB39665.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
gi|445601049|gb|ELY55043.1| transcription factor [Natronolimnobius innermongolicus JCM 12255]
gi|445610861|gb|ELY64628.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|445666578|gb|ELZ19237.1| transcription factor [Haloterrigena limicola JCM 13563]
gi|445783213|gb|EMA34048.1| transcription factor [Halobiforma lacisalsi AJ5]
gi|445793090|gb|EMA43681.1| transcription factor [Halobiforma nitratireducens JCM 10879]
Length = 186
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P++V L+F SGK+VITG K ++ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVSRLEDL 182
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ EP+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKKPEDAEHAVDKIVSRLEDLGL 184
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
>gi|389845649|ref|YP_006347888.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448616732|ref|ZP_21665442.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388242955|gb|AFK17901.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445751387|gb|EMA02824.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 189
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ L P + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLEIVFDKLRDLQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P +V L+F SGK+VITG K
Sbjct: 129 EYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGK 163
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + E ++ L + +
Sbjct: 66 CTGAKSTDDVHESLEIVFDKLRDLQ 90
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGENLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVI 159
Query: 73 TGAKSEQQSKLA 84
TG K Q + A
Sbjct: 160 TGGKKPQDAAAA 171
>gi|448503146|ref|ZP_21612913.1| transcription factor [Halorubrum coriense DSM 10284]
gi|445693155|gb|ELZ45315.1| transcription factor [Halorubrum coriense DSM 10284]
Length = 186
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+N+V++ + +LDL+ +A+ A+Y+P++F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 10 TVENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTG 69
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG-AFSS 133
A S + ++ L P + + +QNIV S D+ + L +A G
Sbjct: 70 ANSIDAVYESLDIVFEELRALQIPIEDPEVTVQNIVTSADLGESLNLNAIAIGLGLEHIE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENI 179
YEPE FPGL+YR+ +P +V L+F SGK+V+TG ++ A + I
Sbjct: 130 YEPEQFPGLVYRLDEPDVVALLFGSGKVVVTGGTSPEDAAAAVDVI 175
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
++N+V S + + L+ +A GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 9 ITVENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTTDPKSAALIFRSGKIV 66
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGA D Y + + ++ E R +Q
Sbjct: 67 CTGANSIDAVYESLDIVF---EELRALQ 91
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L + EY P++F ++ R+ EP AL+F SGK+V
Sbjct: 100 TVQNIVTSADLGESLNLNAIAIGLGLEHIEYEPEQFPGLVYRLDEPDVVALLFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG S + + A + LG
Sbjct: 160 TGGTSPEDAAAAVDVIVEELDGLGL 184
>gi|374633744|ref|ZP_09706109.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Metallosphaera yellowstonensis MK1]
gi|373523532|gb|EHP68452.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Metallosphaera yellowstonensis MK1]
Length = 167
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 40 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPA 99
N EY+P +F +I R+ PK T+LIF SGKMV TGAKS ++ A ++ + +++ G
Sbjct: 7 NVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRYGIRI 66
Query: 100 KFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVS 158
K +IQNIV S ++ + L+ A+ + YEPE FPGLI+RM P++VLLIF S
Sbjct: 67 GGKPKIQIQNIVASANMHVHVNLDKAAFLLEN-NMYEPEQFPGLIFRMDDPRVVLLIFSS 125
Query: 159 GKIVITGAKVRDETYTAFENIY 180
GK+VITGAK DE Y A + I+
Sbjct: 126 GKMVITGAKREDEVYRAVKKIF 147
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ N+ ++L K A N Y P++F +I R+ +P+ LIF+SGKMV TGA
Sbjct: 74 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 133
Query: 76 KSEQQSKLAARK 87
K E + A +K
Sbjct: 134 KREDEVYRAVKK 145
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
Y+P+ FPGLI+R++ PK+ LIF SGK+V+TGAK +E A + I L +
Sbjct: 9 EYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRY 62
>gi|14521176|ref|NP_126651.1| transcription factor [Pyrococcus abyssi GE5]
gi|13124586|sp|Q9V024.1|TBP_PYRAB RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|5458394|emb|CAB49882.1| TATA box binding protein TFIIB-BBRE complex, chain A [Pyrococcus
abyssi GE5]
gi|380741746|tpe|CCE70380.1| TPA: transcription factor [Pyrococcus abyssi GE5]
Length = 191
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 108/177 (61%), Gaps = 11/177 (6%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +LDL+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKL-GFPAKFKD---FKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
KS + R A++I+KL G KFK IQN+V S D+ L+ +A +
Sbjct: 71 KSIHDIE---RAVAKLIEKLKGIGVKFKRAPLIDIQNMVFSGDIGREFNLDNVALTLPN- 126
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR+K P+ V+L+F SGKIV +GAK A+E + +L E K
Sbjct: 127 CEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGAK---SEADAWEAVRKLLRELEK 180
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R+++P+ L+F+SGK+VC+G
Sbjct: 101 DIQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSG 160
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE + A RK R ++K G
Sbjct: 161 AKSEADAWEAVRKLLRELEKYGL 183
>gi|124485272|ref|YP_001029888.1| transcription factor [Methanocorpusculum labreanum Z]
gi|124362813|gb|ABN06621.1| TATA binding protein of transcription factor TFIID
[Methanocorpusculum labreanum Z]
Length = 189
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ ++ LDL +A Q AEYN +RF V++R++ PK AL+F SGK+V TGA
Sbjct: 11 IENIVASTKVNDSLDLVALAAQIPGAEYNKQRFPGVVLRMQNPKIAALVFGSGKVVLTGA 70
Query: 76 KS-EQQSK----LAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
KS E +K L A I L P + +QNIV S D+ I L +A S
Sbjct: 71 KSLENLTKGLEYLVALLKELKINILDNPT----YTVQNIVTSADLGSRINLNKIAMSFNL 126
Query: 131 FS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
YEPE FPGL+YR+ PK+V+L+F SGK++ITG K + A + IY L + +
Sbjct: 127 DKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIITGGKKTADAKKAVKKIYDDLISLKLL 186
Query: 190 Q 190
Q
Sbjct: 187 Q 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L +++L KIA+ EY P++F ++ R+ +PK L+F SGK++
Sbjct: 101 TVQNIVTSADLGSRINLNKIAMSFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLII 160
Query: 73 TGAKSEQQSKLAARK 87
TG K +K A +K
Sbjct: 161 TGGKKTADAKKAVKK 175
>gi|322368133|ref|ZP_08042702.1| TATA-box binding family protein [Haladaptatus paucihalophilus
DX253]
gi|320552149|gb|EFW93794.1| TATA-box binding family protein [Haladaptatus paucihalophilus
DX253]
Length = 186
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTADVHESLEIVFDKLRELNIQVNDDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P++V L+F SGK+VITG K ++ A + I L E
Sbjct: 129 EYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEQAVDKIVSRLEEL 182
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ EP+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K +++LG
Sbjct: 161 GGKKPEDAEQAVDKIVSRLEELGL 184
>gi|448727075|ref|ZP_21709452.1| transcription factor [Halococcus morrhuae DSM 1307]
gi|448737752|ref|ZP_21719787.1| transcription factor [Halococcus thailandensis JCM 13552]
gi|445792275|gb|EMA42886.1| transcription factor [Halococcus morrhuae DSM 1307]
gi|445803308|gb|EMA53606.1| transcription factor [Halococcus thailandensis JCM 13552]
Length = 189
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 11 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 70
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ L + + +QNIV S D++ + L +A G +
Sbjct: 71 AKSTADVHESLEIVFDKLRDLEIRVEEDPEIVVQNIVTSADLQKTLNLNAIAIGLGLENI 130
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P++V L+F SGK+VITG K + A + I L E
Sbjct: 131 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPADAEHAVDKITDRLDEL 184
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 103 VQNIVTSADLQKTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 162
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A K + +LG
Sbjct: 163 GGKEPADAEHAVDKITDRLDELGL 186
>gi|448322383|ref|ZP_21511854.1| transcription factor [Natronococcus amylolyticus DSM 10524]
gi|445601591|gb|ELY55578.1| transcription factor [Natronococcus amylolyticus DSM 10524]
Length = 186
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ ++ +LDL+ +A+ A+Y+P+ F ++ R +PK+ ALIF SGK+VCTG
Sbjct: 9 EIENVVASSSIGQELDLQSLAMDLEGADYDPENFPGLVYRTTDPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAK-FKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + + + ++ L K + +QNIV S D+ + L +A G +
Sbjct: 69 AKSIENVHESLKIVFEELRDLQIEVKEGPEIVVQNIVSSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+V+TG K D+ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDEPNVVALLFGSGKLVVTGGKEVDDARQAIDVIVERLEDL 182
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIVS+ +L L+L IA L N EY P++F ++ R+ EP AL+F SGK+V T
Sbjct: 101 VQNIVSSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPNVVALLFGSGKLVVT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A ++ LG
Sbjct: 161 GGKEVDDARQAIDVIVERLEDLGL 184
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
+I+N+V S + + L+ LA GA Y+PE FPGL+YR PK LIF SGKIV
Sbjct: 8 IEIENVVASSSIGQELDLQSLAMDLEGA--DYDPENFPGLVYRTTDPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFRKVQ 190
TGAK + + E++ V E R +Q
Sbjct: 66 CTGAKSIENVH---ESLKIVFEELRDLQ 90
>gi|410960405|ref|XP_003986780.1| PREDICTED: TATA-box-binding protein [Felis catus]
Length = 246
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 149 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 208
Query: 71 VCTGAKSE 78
VCTGAKS+
Sbjct: 209 VCTGAKSD 216
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 153 QLQNIVSTVNLGCKLDLKTIAL-RARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 211
Query: 165 GAK---------VRDETYTAFENIYPVLTEFRKV 189
GAK VR E Y AFENIYP+L FRK
Sbjct: 212 GAKSDPVCEGAKVRAEIYEAFENIYPILKGFRKT 245
>gi|289581532|ref|YP_003479998.1| TATA-box binding family protein [Natrialba magadii ATCC 43099]
gi|336252658|ref|YP_004595765.1| TATA-box binding family protein [Halopiger xanaduensis SH-6]
gi|433589465|ref|YP_007278961.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|448283054|ref|ZP_21474333.1| transcription factor [Natrialba magadii ATCC 43099]
gi|448354487|ref|ZP_21543243.1| transcription factor [Natrialba hulunbeirensis JCM 10989]
gi|448357153|ref|ZP_21545859.1| transcription factor [Natrialba chahannaoensis JCM 10990]
gi|448381388|ref|ZP_21561591.1| transcription factor [Haloterrigena thermotolerans DSM 11522]
gi|289531085|gb|ADD05436.1| TATA-box binding family protein [Natrialba magadii ATCC 43099]
gi|335336647|gb|AEH35886.1| TATA-box binding family protein [Halopiger xanaduensis SH-6]
gi|433304245|gb|AGB30057.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|445574762|gb|ELY29250.1| transcription factor [Natrialba magadii ATCC 43099]
gi|445637375|gb|ELY90525.1| transcription factor [Natrialba hulunbeirensis JCM 10989]
gi|445649961|gb|ELZ02892.1| transcription factor [Natrialba chahannaoensis JCM 10990]
gi|445663196|gb|ELZ15950.1| transcription factor [Haloterrigena thermotolerans DSM 11522]
Length = 186
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P++V L+F SGK+VITG K ++ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVSRLEDL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKKPEDAEHAVDKIVSRLEDLGL 184
>gi|359417767|ref|ZP_09209836.1| transcription factor [Candidatus Haloredivivus sp. G17]
gi|358031860|gb|EHK00695.1| transcription factor [Candidatus Haloredivivus sp. G17]
Length = 182
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +L L +IA+ N EY P++F ++ R+ PK AL+F SGK+VCTG
Sbjct: 8 EIQNVVASATFNQRLPLDRIAIYLENTEYEPEQFPGLVYRLENPKAAALLFGSGKVVCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS +Q+K A K +++ K D +QNIV S ++ + L +A+ +
Sbjct: 68 TKSPEQAKEATHKIIDELREADVEIDTKPDVTVQNIVASSQLEGTLNLNRIAFEL-VGTE 126
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
YEPE FPGL+YR+ +P++V L+F SG +V TG + ++
Sbjct: 127 YEPEQFPGLVYRLDEPQVVFLLFSSGNLVCTGGRTYED 164
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+V+NIV++ L+ L+L +IA + EY P++F ++ R+ EP+ L+F+SG +VCTG
Sbjct: 99 TVQNIVASSQLEGTLNLNRIAFELVGTEYEPEQFPGLVYRLDEPQVVFLLFSSGNLVCTG 158
Query: 75 AKSEQQSKLAARKYARIIQKLG 96
++ + K K ++++G
Sbjct: 159 GRTYEDVKEGIAKLEENLKEIG 180
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 102 KDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
D +IQN+V S + L+ +A + + YEPE FPGL+YR++ PK L+F SGK+
Sbjct: 5 DDIEIQNVVASATFNQRLPLDRIAI-YLENTEYEPEQFPGLVYRLENPKAAALLFGSGKV 63
Query: 162 VITGAKVRDETYTAFENIYPVLTEFRK 188
V TG K ++ A E + ++ E R+
Sbjct: 64 VCTGTKSPEQ---AKEATHKIIDELRE 87
>gi|240102503|ref|YP_002958812.1| transcription factor [Thermococcus gammatolerans EJ3]
gi|239910057|gb|ACS32948.1| TATA box-binding protein, transcription initiation factor TFIID
(tbp) [Thermococcus gammatolerans EJ3]
Length = 192
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+K+ N++YNP+ F +I R EPK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAELNLEKVIEICPNSKYNPEEFPGIICRFDEPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQ-KLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 133
KS + + A +K +++ K+G K IQN+V S D+ L+ +A S
Sbjct: 71 KSVEDIERAVKKLTEMLKTKVGTKFTKPPQIDIQNMVFSGDIGMEFNLDAVALSL-PNCE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR K PK V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 130 YEPEQFPGVIYRAKDPKAVILLFSSGKIVCSGAKSEKD---AWEAVKKLLRELEK 181
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R ++PK L+F+SGK+VC+G
Sbjct: 102 DIQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRAKDPKAVILLFSSGKIVCSG 161
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE+ + A +K R ++K G
Sbjct: 162 AKSEKDAWEAVKKLLRELEKYGL 184
>gi|224145966|ref|XP_002325830.1| predicted protein [Populus trichocarpa]
gi|222862705|gb|EEF00212.1| predicted protein [Populus trichocarpa]
Length = 70
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 59/65 (90%)
Query: 127 SHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
S YEPE+FPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF
Sbjct: 5 SRARLVQYEPEIFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 64
Query: 187 RKVQQ 191
RKVQQ
Sbjct: 65 RKVQQ 69
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 37 QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 84
+AR +Y P+ F +I R+++PK LIF SGK+V TGAK ++ A
Sbjct: 6 RARLVQYEPEIFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTA 53
>gi|429191762|ref|YP_007177440.1| TATA-box binding protein [Natronobacterium gregoryi SP2]
gi|448325091|ref|ZP_21514490.1| transcription factor [Natronobacterium gregoryi SP2]
gi|429135980|gb|AFZ72991.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronobacterium gregoryi SP2]
gi|445616448|gb|ELY70074.1| transcription factor [Natronobacterium gregoryi SP2]
Length = 186
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P++V L+F SGK+VITG K ++ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVTRLEDL 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKKPEDAEHAVDKIVTRLEDLGL 184
>gi|448371909|ref|ZP_21557028.1| transcription factor [Natrialba aegyptia DSM 13077]
gi|445647000|gb|ELY99980.1| transcription factor [Natrialba aegyptia DSM 13077]
Length = 186
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ +D +L+L+++ A+YNP+ F ++ R +EPK ALIF SGK+VCTGA
Sbjct: 10 IENVVASTGIDQELNLEQVGDDLPEADYNPEHFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 76 KSEQQSKLAARKYARIIQKLGFP-AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
SE + + +++ LG ++ ++Q IV S D L +A G
Sbjct: 70 SSEPAVRESLSTVFEVLRDLGIDISESPTIEVQIIVASVDFGSQFNLNAIAIGLGLEDVE 129
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P V L+F SGK +ITGAK D A + LT+
Sbjct: 130 YEPEQFPGLVYRLDDPSAVALLFGSGKAIITGAKTTDAVTHATNAVETRLTDL 182
>gi|298675995|ref|YP_003727745.1| TATA-box-binding family protein [Methanohalobium evestigatum
Z-7303]
gi|298288983|gb|ADI74949.1| TATA-box binding family protein [Methanohalobium evestigatum
Z-7303]
Length = 187
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L + DL KI + AEYN ++F ++ R+ PK L+F SGK+VCTGA
Sbjct: 12 IENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSNPKAAFLVFTSGKVVCTGA 71
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFKD--FKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
K+ + A+ + +G KD +QNIV S D+ + L +A G +
Sbjct: 72 KNVDDVHVVIGNMAKKLNDIGIET-IKDPVITVQNIVASADLHAVLNLNAIAIGLGLENI 130
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 177
YEPE FPGL+YR+ PK+V+LIF SGK+V+TG K D E
Sbjct: 131 EYEPEQFPGLVYRIDDPKVVVLIFSSGKLVVTGGKSPDHCERGVE 175
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGL-AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ KI+N+V S + L + A GA Y + FPGL+YR+ PK L+F SGK+
Sbjct: 9 NIKIENVVASTKLAEEFDLTKIEAEFEGA--EYNKQKFPGLVYRVSNPKAAFLVFTSGKV 66
Query: 162 VITGAKVRDETYTAFENIYPVLTEF 186
V TGAK D+ + N+ L +
Sbjct: 67 VCTGAKNVDDVHVVIGNMAKKLNDI 91
>gi|284163428|ref|YP_003401707.1| TATA-box binding family protein [Haloterrigena turkmenica DSM 5511]
gi|448307952|ref|ZP_21497838.1| transcription factor [Natronorubrum bangense JCM 10635]
gi|448320837|ref|ZP_21510322.1| transcription factor [Natronococcus amylolyticus DSM 10524]
gi|448330303|ref|ZP_21519586.1| transcription factor [Natrinema versiforme JCM 10478]
gi|448351218|ref|ZP_21540027.1| transcription factor [Natrialba taiwanensis DSM 12281]
gi|448364173|ref|ZP_21552767.1| transcription factor [Natrialba asiatica DSM 12278]
gi|448367160|ref|ZP_21555008.1| transcription factor [Natrialba aegyptia DSM 13077]
gi|448388559|ref|ZP_21565334.1| transcription factor [Haloterrigena salina JCM 13891]
gi|284013083|gb|ADB59034.1| TATA-box binding family protein [Haloterrigena turkmenica DSM 5511]
gi|445594922|gb|ELY49056.1| transcription factor [Natronorubrum bangense JCM 10635]
gi|445605264|gb|ELY59194.1| transcription factor [Natronococcus amylolyticus DSM 10524]
gi|445611982|gb|ELY65723.1| transcription factor [Natrinema versiforme JCM 10478]
gi|445634902|gb|ELY88076.1| transcription factor [Natrialba taiwanensis DSM 12281]
gi|445645061|gb|ELY98068.1| transcription factor [Natrialba asiatica DSM 12278]
gi|445653644|gb|ELZ06513.1| transcription factor [Natrialba aegyptia DSM 13077]
gi|445670314|gb|ELZ22917.1| transcription factor [Haloterrigena salina JCM 13891]
Length = 186
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P++V L+F SGK+VITG K + A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPKDAEHAVDKIVSRLEDL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ EP+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKKPKDAEHAVDKIVSRLEDLGL 184
>gi|448335606|ref|ZP_21524747.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|445616584|gb|ELY70205.1| transcription factor [Natrinema pellirubrum DSM 15624]
Length = 186
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRSQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P++V L+F SGK+VITG K ++ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVSRLEDL 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRSQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKKPEDAEHAVDKIVSRLEDLGL 184
>gi|433593455|ref|YP_007296196.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|433307965|gb|AGB33776.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
Length = 193
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ +D +L+L+ +A +Y+ +RF + R + PK+ ALIF SGK+VCTG
Sbjct: 16 TIENVVASTGVDRELNLEAVAEDLDGTDYDQERFPGAVYRTQNPKSAALIFRSGKIVCTG 75
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ LG + IQNIV S D+ + L +A G +
Sbjct: 76 AKSTDDVYESLNIVFDELRGLGIDVPSNPEITIQNIVSSGDLGSAVNLNAIAIGFGLENI 135
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YRM P +V LIF SGK+V+TGAK + A + I L E
Sbjct: 136 EYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVTGAKEPADAGRALDVISSRLDEL 189
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQ--ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+++NIVS+ +L ++L IA+ N EY P++F ++ R+ +P LIF SGK+V
Sbjct: 107 TIQNIVSSGDLGSAVNLNAIAIGFGLENIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVV 166
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + A + + +LG
Sbjct: 167 TGAKEPADAGRALDVISSRLDELGL 191
>gi|57640067|ref|YP_182545.1| transcription factor [Thermococcus kodakarensis KOD1]
gi|2833446|sp|Q52366.1|TBP_PYRKO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|2129420|pir||JC4514 TATA-binding protein - Pyrococcus sp
gi|1405351|dbj|BAA08743.1| TATA binding protein [Pyrococcus sp.]
gi|57158391|dbj|BAD84321.1| transcription initiation factor TFIID [Thermococcus kodakarensis
KOD1]
Length = 190
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 109/179 (60%), Gaps = 6/179 (3%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L L+L+K+ +++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFTDLNLEKVIEICPSSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS 132
KS K A K +++K+G AKF IQN+V S D+ L+ +A
Sbjct: 71 KSVDDIKRAVYKLIEMLKKIG--AKFTREPQIDIQNMVFSGDIGMEFNLDAVALILPN-C 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 191
YEPE FPG+IYR+K+P+ V+L+F SGKIV +GAK + + A + + L ++ +++
Sbjct: 128 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEQDAWEAVKKLLRELEKYGLIEE 186
>gi|448335944|ref|ZP_21525067.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|448404754|ref|ZP_21572552.1| transcription factor [Haloterrigena limicola JCM 13563]
gi|445614729|gb|ELY68395.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|445663265|gb|ELZ16018.1| transcription factor [Haloterrigena limicola JCM 13563]
Length = 186
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ +D +L+L+ +A +Y+ +RF + R + PK+ ALIF SGK+VCTG
Sbjct: 9 TIENVVASTGVDRELNLEAVAEDLDGTDYDQERFPGAVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ LG + IQNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVYESLNIVFDELRGLGIDVPSNPEITIQNIVSSGDLGSAVNLNAIAIGFGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YRM P +V LIF SGK+V+TGAK + A + I L E
Sbjct: 129 EYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVTGAKEPADAGRALDVISSRLDEL 182
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQ--ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+++NIVS+ +L ++L IA+ N EY P++F ++ R+ +P LIF SGK+V
Sbjct: 100 TIQNIVSSGDLGSAVNLNAIAIGFGLENIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVV 159
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK + A + + +LG
Sbjct: 160 TGAKEPADAGRALDVISSRLDELGL 184
>gi|219851944|ref|YP_002466376.1| transcription factor [Methanosphaerula palustris E1-9c]
gi|219546203|gb|ACL16653.1| TATA-box binding family protein [Methanosphaerula palustris E1-9c]
Length = 186
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++ + LDL IA Q AEY+ KRF V++RI++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDHLDLPAIASQLEGAEYDKKRFPGVVIRIKDPKIAALVFNSGKVVLTGA 70
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
KS + +++ +G + +QNIV S D+ I L +A
Sbjct: 71 KSIDILDRGIALLSDMLRAIGVEIDGTPTYTVQNIVTSADLGSTINLNKIAVGFNLNKIE 130
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 184
YEPE FPGL+YR+ PK+VLL+F SGK++ITG K + A + I LT
Sbjct: 131 YEPEQFPGLVYRLDDPKVVLLLFGSGKMIITGGKHTVDAERAVQRIMSDLT 181
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIAL--QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L ++L KIA+ EY P++F ++ R+ +PK L+F SGKM+
Sbjct: 101 TVQNIVTSADLGSTINLNKIAVGFNLNKIEYEPEQFPGLVYRLDDPKVVLLLFGSGKMII 160
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K ++ A ++ + LG
Sbjct: 161 TGGKHTVDAERAVQRIMSDLTGLGL 185
>gi|448730744|ref|ZP_21713048.1| transcription factor [Halococcus saccharolyticus DSM 5350]
gi|445792921|gb|EMA43516.1| transcription factor [Halococcus saccharolyticus DSM 5350]
Length = 191
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 17 KNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 76
+N+V++ + ++DL+ +A+ A+++P +F +I R + T L+F SGK+ CTGA
Sbjct: 17 QNVVASSGIGQEIDLESVAMDLTGADFDPGQFPGLIYRPADAAATCLLFRSGKITCTGAG 76
Query: 77 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-SYE 135
S ++ + +LG + +QNIV D+ + L +A G S YE
Sbjct: 77 SIEEVHETVHVAVDALAELGIDVGTPEVTVQNIVSGADLGERLNLNAIAIGLGLESVEYE 136
Query: 136 PELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKV 189
PE FPGL+YR+ P +V L+F SGK+VITGAK+ D A E I L + V
Sbjct: 137 PEQFPGLVYRLDDPDVVALLFGSGKMVITGAKIHDNAEAALEEIIRRLNDLGLV 190
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIVS +L +L+L IA L + EY P++F ++ R+ +P AL+F SGKMV
Sbjct: 105 TVQNIVSGADLGERLNLNAIAIGLGLESVEYEPEQFPGLVYRLDDPDVVALLFGSGKMVI 164
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TGAK ++ A + R + LG
Sbjct: 165 TGAKIHDNAEAALEEIIRRLNDLGL 189
>gi|433637530|ref|YP_007283290.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Halovivax ruber XH-70]
gi|448375336|ref|ZP_21558902.1| transcription factor [Halovivax asiaticus JCM 14624]
gi|433289334|gb|AGB15157.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Halovivax ruber XH-70]
gi|445658890|gb|ELZ11703.1| transcription factor [Halovivax asiaticus JCM 14624]
Length = 186
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P++V L+F SGK+VITG K
Sbjct: 129 EYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGK 163
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ EP+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A K ++ LG
Sbjct: 161 GGKRPVDAEHAVDKIVSRLEDLGL 184
>gi|223478548|ref|YP_002582873.1| TATA-box binding protein [Thermococcus sp. AM4]
gi|214033774|gb|EEB74600.1| TATA-box binding protein [Thermococcus sp. AM4]
Length = 192
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++NIV++V+L +L+L+K+ N++YNP+ F +I R +PK LIF+SGK+V TGA
Sbjct: 11 IENIVASVDLFAELNLEKVIEICPNSKYNPEEFPGIICRFEDPKVALLIFSSGKLVVTGA 70
Query: 76 KSEQQSKLAARKYARIIQ-KLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGAF 131
KS + + A +K +++ K+G KF IQN+V S D+ L+ +A S
Sbjct: 71 KSVEDIERAVKKLTEMLKTKVG--TKFTRPPQIDIQNMVFSGDIGMEFNLDAVALSL-PN 127
Query: 132 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
YEPE FPG+IYR K PK V+L+F SGKIV +GAK + A+E + +L E K
Sbjct: 128 CEYEPEQFPGVIYRAKDPKAVILLFSSGKIVCSGAKSEKD---AWEAVKKLLRELEK 181
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V + ++ + +L +AL N EY P++F VI R ++PK L+F+SGK+VC+G
Sbjct: 102 DIQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRAKDPKAVILLFSSGKIVCSG 161
Query: 75 AKSEQQSKLAARKYARIIQKLGF 97
AKSE+ + A +K R ++K G
Sbjct: 162 AKSEKDAWEAVKKLLRELEKYGL 184
>gi|440300791|gb|ELP93238.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 201
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 103/174 (59%), Gaps = 22/174 (12%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
+ N+VST L+ +LDL++I A I K+TALI +GK+VCTG
Sbjct: 43 IANVVSTFQLNQQLDLRQIVKSA----------------ISSLKSTALILKTGKIVCTGT 86
Query: 76 KSEQQSKLAARKYARIIQKLGF-PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSY 134
+S ++SK+AA+ I+K+G+ +F +F + I SCD+KF I L L S+ Y
Sbjct: 87 RSIEESKIAAK----TIKKIGYNEVRFSNFNVHTI-RSCDIKFQISLRPLYDSNTDMCQY 141
Query: 135 EPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRK 188
EPE+FP L++R QPK+ LL+F +GK+V+TGAK + TA+ I P+L +K
Sbjct: 142 EPEVFPVLVFRTTQPKVTLLVFSTGKVVLTGAKDDENLNTAYTKICPILLANKK 195
>gi|448303994|ref|ZP_21493939.1| transcription factor [Natronorubrum sulfidifaciens JCM 14089]
gi|445592081|gb|ELY46273.1| transcription factor [Natronorubrum sulfidifaciens JCM 14089]
Length = 186
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ P++V L+F SGK+VITG K + A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPKDAEHAVDKIVSRLEDL 182
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K + ++ A K ++ LG
Sbjct: 161 GGKKPKDAEHAVDKIVSRLEDLGL 184
>gi|397772369|ref|YP_006539915.1| TATA-box binding family protein [Natrinema sp. J7-2]
gi|448342237|ref|ZP_21531189.1| transcription factor [Natrinema gari JCM 14663]
gi|448346767|ref|ZP_21535649.1| transcription factor [Natrinema altunense JCM 12890]
gi|397681462|gb|AFO55839.1| TATA-box binding family protein [Natrinema sp. J7-2]
gi|445626228|gb|ELY79577.1| transcription factor [Natrinema gari JCM 14663]
gi|445632029|gb|ELY85252.1| transcription factor [Natrinema altunense JCM 12890]
Length = 186
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +P++V L+F SGK+VITG K
Sbjct: 129 EYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGK 163
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ EP+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A K ++ LG
Sbjct: 161 GGKKPVDAEHAVDKIVSRLEDLGL 184
>gi|327282209|ref|XP_003225836.1| PREDICTED: beclin 1-associated autophagy-related key regulator-like
[Anolis carolinensis]
Length = 613
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIV+TVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 128 GIVPQLQNIVATVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 187
Query: 71 VCTGAK--SEQQSKL 83
VCTGAK SE++ +L
Sbjct: 188 VCTGAKRFSEKKERL 202
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 132 QLQNIVATVNLACKLDLKNIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 190
Query: 165 GAK 167
GAK
Sbjct: 191 GAK 193
>gi|300709793|ref|YP_003735607.1| TATA-box binding family protein [Halalkalicoccus jeotgali B3]
gi|448297437|ref|ZP_21487483.1| transcription factor [Halalkalicoccus jeotgali B3]
gi|299123476|gb|ADJ13815.1| TATA-box binding family protein [Halalkalicoccus jeotgali B3]
gi|445579746|gb|ELY34139.1| transcription factor [Halalkalicoccus jeotgali B3]
Length = 185
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 8 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 67
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + + ++ L + + +QNIV S D+ + L +A G +
Sbjct: 68 AKSTDDVHESLQIVFDKLRDLEIQVQDDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 127
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ +PK+V L+F SGK+VITG K
Sbjct: 128 EYEPEQFPGLVYRLDEPKVVALLFGSGKLVITGGK 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ EPK AL+F SGK+V T
Sbjct: 100 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPKVVALLFGSGKLVIT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A K ++ LG
Sbjct: 160 GGKQPVDAEHAVDKIVSRLEDLGL 183
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 7 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 64
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + + ++ L +
Sbjct: 65 CTGAKSTDDVHESLQIVFDKLRDLE 89
>gi|410670721|ref|YP_006923092.1| TATA box binding protein [Methanolobus psychrophilus R15]
gi|409169849|gb|AFV23724.1| TATA box binding protein [Methanolobus psychrophilus R15]
Length = 183
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L + DL KI + AEYN ++F ++ R+ +PK L+F SGK+VCTGA
Sbjct: 8 IENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
K+ A+ + +G K + +QNIV S D++ + L +A G +
Sbjct: 68 KNVADVHTVIGNMAKKLNGIGIKTIEKPEITVQNIVASADLQAVLNLNAIAIGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR++ PK+V+LIF SGK+V+TG K
Sbjct: 128 YEPEQFPGLVYRIEDPKVVVLIFSSGKLVVTGGK 161
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ RI +PK LIF+SGK+V
Sbjct: 98 TVQNIVASADLQAVLNLNAIAIGLGLENIEYEPEQFPGLVYRIEDPKVVVLIFSSGKLVV 157
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG KS + + + + +G
Sbjct: 158 TGGKSPENCEQGVEVVRQQLDSMGL 182
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 103 DFKIQNIVGSCDVKFPIRLEGL-AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI 161
+ KI+N+V S + L + A GA Y + FPGL+YR+ PK L+F SGK+
Sbjct: 5 NIKIENVVASTKLAEEFDLTKIEAEFEGA--EYNKQKFPGLVYRVSDPKAAFLVFTSGKV 62
Query: 162 VITGAKVRDETYTAFENI 179
V TGAK + +T N+
Sbjct: 63 VCTGAKNVADVHTVIGNM 80
>gi|448302509|ref|ZP_21492488.1| transcription factor [Natronorubrum tibetense GA33]
gi|445581175|gb|ELY35537.1| transcription factor [Natronorubrum tibetense GA33]
Length = 186
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
++N+V++ + +L+L + + +Y+P F +I R+++PK T L+F +GK+VCTG
Sbjct: 9 EIQNVVASTGVGQELELDALGQDLDDVQYDPDHFPGLIYRLQDPKATVLLFRTGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
A S + A + ++ LG A ++ +QNIV + D+ + L +A G +
Sbjct: 69 ATSVHNVQTALQDVFDTLRSLGIEAPADREITVQNIVSNADLDRQLNLNAIAIGLGLENV 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRD 170
YEPE FPGL+YR+ +P+ V+L+F SGK++ITG K R+
Sbjct: 129 EYEPEQFPGLLYRLDEPEAVVLLFTSGKLLITGVKTRE 166
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
+IQN+V S V + L+ L Y+P+ FPGLIYR++ PK +L+F +GKIV
Sbjct: 8 IEIQNVVASTGVGQELELDALGQDLDDVQ-YDPDHFPGLIYRLQDPKATVLLFRTGKIVC 66
Query: 164 TGAKVRDETYTAFENIYPVL 183
TGA TA ++++ L
Sbjct: 67 TGATSVHNVQTALQDVFDTL 86
>gi|448730264|ref|ZP_21712572.1| transcription factor [Halococcus saccharolyticus DSM 5350]
gi|448735254|ref|ZP_21717470.1| transcription factor [Halococcus salifodinae DSM 8989]
gi|445793432|gb|EMA44004.1| transcription factor [Halococcus saccharolyticus DSM 5350]
gi|445798592|gb|EMA48989.1| transcription factor [Halococcus salifodinae DSM 8989]
Length = 189
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R +EPK+ ALIF SGK+VCTG
Sbjct: 11 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTG 70
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + ++ L + + +QNIV S D++ + L +A G +
Sbjct: 71 AKSTADVHESLEIVFDKLRDLEIRVEDDPEIVVQNIVTSADLQKTLNLNAIAIGLGLENI 130
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ P++V L+F SGK+VITG K
Sbjct: 131 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGK 165
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR ++PK LIF SGKIV
Sbjct: 10 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQEPKSAALIFRSGKIV 67
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK + + + E ++ L +
Sbjct: 68 CTGAKSTADVHESLEIVFDKLRDLE 92
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 103 VQNIVTSADLQKTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 162
Query: 74 GAKSEQQSKLAARK 87
G K ++ A K
Sbjct: 163 GGKEPADAEHAVDK 176
>gi|448302231|ref|ZP_21492214.1| transcription factor [Natronorubrum tibetense GA33]
gi|445581890|gb|ELY36238.1| transcription factor [Natronorubrum tibetense GA33]
Length = 186
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +LDL+ +A+ A+Y+P++F ++ R + PK+ ALIF SGK+VCTG
Sbjct: 9 NIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + R +++L + +QNIV S D+ + L +A G +
Sbjct: 69 AKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAK 167
YEPE FPGL+YR+ P++V L+F SGK+VITG K
Sbjct: 129 EYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGK 163
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYS-HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV 162
I+N+V S + + L+ +A GA Y+PE FPGL+YR + PK LIF SGKIV
Sbjct: 8 INIENVVASTGIGQELDLQSVAMDLEGA--DYDPEQFPGLVYRTQNPKSAALIFRSGKIV 65
Query: 163 ITGAKVRDETYTAFENIYPVLTEFR 187
TGAK D+ + + ++ L E +
Sbjct: 66 CTGAKSTDDVHESLRIVFDKLRELQ 90
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA L N EY P++F ++ R+ +P+ AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVIT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A K ++ LG
Sbjct: 161 GGKKPVDAEHAVDKIVSRLEDLGL 184
>gi|21227130|ref|NP_633052.1| transcription factor [Methanosarcina mazei Go1]
gi|452209606|ref|YP_007489720.1| TATA-box binding protein [Methanosarcina mazei Tuc01]
gi|24638251|sp|Q8PY36.1|TBP2_METMA RecName: Full=TATA-box-binding protein 2; AltName: Full=Box
A-binding protein 2; Short=BAP 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP 2; AltName:
Full=TATA-box factor 2
gi|20905461|gb|AAM30724.1| Transcription initiation factor TFIIB [Methanosarcina mazei Go1]
gi|452099508|gb|AGF96448.1| TATA-box binding protein [Methanosarcina mazei Tuc01]
Length = 183
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 75
++N+V++ L + DL I Q AEYN ++F ++ R+ +PK L+F SGK+VCTGA
Sbjct: 8 IENVVASTKLAEEFDLTVIESQFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVCTGA 67
Query: 76 KSEQQSKLAARKYARIIQKLGFPA-KFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFS-S 133
K+ A+ + +G + +QNIV S D+ + L +A G +
Sbjct: 68 KNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIGLGLENIE 127
Query: 134 YEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFE 177
YEPE FPGL+YR+ +PK+V+LIF SGK+V+TG K ++ + E
Sbjct: 128 YEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKTPEDCESGVE 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 SVKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 72
+V+NIV++ +L L+L IA L N EY P++F ++ RI EPK LIF+SGK+V
Sbjct: 98 TVQNIVASADLHTILNLNAIAIGLGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVV 157
Query: 73 TGAKSEQQSKLAARKYARIIQKLGF 97
TG K+ + + + + +G
Sbjct: 158 TGGKTPEDCESGVEVVRQQLDNMGL 182
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 104 FKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVI 163
KI+N+V S + L + S + Y + FPGL+YR+ PK L+F SGK+V
Sbjct: 6 IKIENVVASTKLAEEFDLT-VIESQFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVC 64
Query: 164 TGAKVRDETYTAFENI 179
TGAK + +T N+
Sbjct: 65 TGAKNVADVHTVIGNM 80
>gi|448316221|ref|ZP_21505845.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|445609220|gb|ELY63027.1| transcription factor [Natronococcus jeotgali DSM 18795]
Length = 186
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 74
+++N+V++ + +L L+ +A+ A+Y+P++F ++ R +PK ALIF SGK+VCTG
Sbjct: 9 TIENVVASSGIGQELALESLAMDLPGADYDPEQFPGLVYRTTDPKAAALIFRSGKIVCTG 68
Query: 75 AKSEQQSKLAARKYARIIQKLGFPAKFK-DFKIQNIVGSCDVKFPIRLEGLAYSHGAFS- 132
AKS + + + R ++ L + + +QNIV S D+ + L +A G S
Sbjct: 69 AKSIEGVQESMRIVFEKLRDLQIEVEADPEIVVQNIVSSADLGRSLNLNAIAIGLGLESI 128
Query: 133 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 186
YEPE FPGL+YR+ +P +V L+F SGK+V+TG K D+ A + I L +
Sbjct: 129 EYEPEQFPGLVYRLDEPDVVTLLFGSGKLVVTGGKDVDDARHAIDVIVERLEDL 182
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIA--LQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIVS+ +L L+L IA L + EY P++F ++ R+ EP L+F SGK+V T
Sbjct: 101 VQNIVSSADLGRSLNLNAIAIGLGLESIEYEPEQFPGLVYRLDEPDVVTLLFGSGKLVVT 160
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K ++ A ++ LG
Sbjct: 161 GGKDVDDARHAIDVIVERLEDLGL 184
>gi|20089176|ref|NP_615251.1| transcription factor [Methanosarcina acetivorans C2A]
gi|24638262|sp|Q8TTZ7.1|TBP3_METAC RecName: Full=TATA-box-binding protein 3; AltName: Full=Box
A-binding protein 3; Short=BAP 3; AltName: Full=TATA
sequence-binding protein 3; Short=TBP 3; AltName:
Full=TATA-box factor 3
gi|19914048|gb|AAM03731.1| TATA-binding protein [Methanosarcina acetivorans C2A]
Length = 185
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 6/162 (3%)
Query: 15 SVKNIVSTVNLDCKLDLKKIALQA-RNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
+++N+V++ L + DL KI AEYN +F ++ RI PK LIF SGK+VCT
Sbjct: 6 TIENVVASTALATEFDLVKIMDSGLEGAEYNKTKFPGLVYRIDNPKAAFLIFTSGKVVCT 65
Query: 74 GAKSEQQSKLAARKYARIIQKLGFPAKFK---DFKIQNIVGSCDVKFPIRLEGLAYSHGA 130
GAK+ + A A ++ +G K + +QNIV S D+K + L +A + G
Sbjct: 66 GAKTINNAHKAITNLANKLKDIGCD-KINLEPEIHVQNIVASADLKTTLNLNTIAIAFGL 124
Query: 131 FS-SYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 171
+ YEPE+FPGLIYR++ PK+V+L+F SGK+VITG K ++
Sbjct: 125 ENVEYEPEVFPGLIYRVEAPKVVVLVFSSGKLVITGGKCEED 166
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 16 VKNIVSTVNLDCKLDLKKIALQ--ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 73
V+NIV++ +L L+L IA+ N EY P+ F +I R+ PK L+F+SGK+V T
Sbjct: 100 VQNIVASADLKTTLNLNTIAIAFGLENVEYEPEVFPGLIYRVEAPKVVVLVFSSGKLVIT 159
Query: 74 GAKSEQQSKLAARKYARIIQKLGF 97
G K E+ R + LG
Sbjct: 160 GGKCEEDCNGGLRIVRKEFDNLGL 183
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 106 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 165
I+N+V S + L + S + Y FPGL+YR+ PK LIF SGK+V TG
Sbjct: 7 IENVVASTALATEFDLVKIMDSGLEGAEYNKTKFPGLVYRIDNPKAAFLIFTSGKVVCTG 66
Query: 166 AKVRDETYTAFENI 179
AK + + A N+
Sbjct: 67 AKTINNAHKAITNL 80
>gi|281346310|gb|EFB21894.1| hypothetical protein PANDA_021469 [Ailuropoda melanoleuca]
Length = 213
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 61/66 (92%)
Query: 11 GAVSSVKNIVSTVNLDCKLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 70
G V ++NIVSTVNL CKLDLKKIAL A+NAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 148 GIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 207
Query: 71 VCTGAK 76
VCTGAK
Sbjct: 208 VCTGAK 213
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 105 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 164
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 152 QLQNIVSTVNLACKLDLKKIAL-HAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 210
Query: 165 GAK 167
GAK
Sbjct: 211 GAK 213
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,605,220,392
Number of Sequences: 23463169
Number of extensions: 94344224
Number of successful extensions: 266766
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 262438
Number of HSP's gapped (non-prelim): 1904
length of query: 191
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 57
effective length of database: 9,215,130,721
effective search space: 525262451097
effective search space used: 525262451097
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 72 (32.3 bits)