BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029593
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1
Length = 280
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
FD+D+ LY S T I ++++I F S A L +K YG + GL + +
Sbjct: 60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 118
Query: 70 DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRNHAITCLKR 123
+ A +Y+ V LP D++KPD LRN+L + Q + +FTN+ +NHAI CL+
Sbjct: 119 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 178
Query: 124 LEIADCFD 131
L IAD FD
Sbjct: 179 LGIADLFD 186
>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1
Length = 226
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+ FDLD+ LYP I + I F +K G +A LR ++ YG + GL L
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 68 GYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRK--IIFTNSDRNHAITCLKRL 124
++I A DY V LP + +IK D LR +L + ++ IFTN+ HA LK L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159
I DCFD I + +L P+ + +++ +
Sbjct: 127 GIEDCFDGITYCDYNAKDLIAKPMPEMYERVMREA 161
>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1
Length = 321
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
FD+D+TLY T + +++++ F + GF + +A L ++ YG ++ GL
Sbjct: 57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQ 116
Query: 70 DIGADDYHGFVHGRLP-YDLIKPDPQLRN-------LLCSITQRKIIFTNSDRNHAITCL 121
Y+ F+ LP D +KPD +LR + +FTNS +NHAI C+
Sbjct: 117 IDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCV 176
Query: 122 KRLEIADCFDQI 133
K L IAD FD I
Sbjct: 177 KILGIADLFDGI 188
>sp|Q9V1B3|YB10_PYRAB Uncharacterized HAD-hydrolase PYRAB05140 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB05140 PE=3 SV=1
Length = 238
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 36/188 (19%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRN-IEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-- 63
+ FDLDDTL + T +A +RN IE + A S +EL K YGS
Sbjct: 4 VIFFDLDDTLVDT-TKLAELARRNAIENMIRHGLPVDFETAYSELMELIKEYGSNFPHHF 62
Query: 64 ---LRAL-------GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQ---RKIIFT 110
LR L G YH + ++ P R +L + + R I T
Sbjct: 63 DYLLRRLDLPYNPKWVSAGVIAYHN-----TKFAYLREVPGARKVLIRLRELGYRLGIIT 117
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
+ + + RLEI D F+ +I +F + KP K AL
Sbjct: 118 DGNPVKQWEKILRLEIDDFFEHVII--------------SDFEGVKKPHPKIFKKALKAF 163
Query: 171 NVDPRHAV 178
NVD + A+
Sbjct: 164 NVDAQEAL 171
>sp|Q8TWR2|Y970_METKA Uncharacterized HAD-hydrolase MK0970 OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=MK0970 PE=3 SV=2
Length = 233
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIE---KCGFSETKASSLRVELFKAYGST 60
++FD+DDTLYPS + +A +RN +IE + SE + E+ K YGS
Sbjct: 2 IKAVLFDVDDTLYPS-SKLAEEARRNAIRAMIEAGLETDLSEEELYRELQEVVKEYGSN 59
>sp|O59346|Y1655_PYRHO Uncharacterized HAD-hydrolase PH1655 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH1655 PE=1 SV=1
Length = 241
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 65/188 (34%), Gaps = 34/188 (18%)
Query: 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-- 63
+ FDLDDTL + A K IE + A S +EL K YGS
Sbjct: 3 KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHF 62
Query: 64 ---LRAL-------GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFT 110
LR L G YH + ++ P R +L + + I T
Sbjct: 63 DYLLRRLDLPYNPKWISAGVIAYHN-----TKFAYLREVPGARKVLIRLKELGYELGIIT 117
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
+ + + RLE+ D F+ +I +F + KP K AL
Sbjct: 118 DGNPVKQWEKILRLELDDFFEHVII--------------SDFEGVKKPHPKIFKKALKAF 163
Query: 171 NVDPRHAV 178
NV P A+
Sbjct: 164 NVKPEEAL 171
>sp|Q8U040|Y1777_PYRFU Uncharacterized HAD-hydrolase PF1777 OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=PF1777 PE=3
SV=1
Length = 240
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 65/188 (34%), Gaps = 34/188 (18%)
Query: 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-- 63
+ FDLDDTL + A K IE + A + +EL K YGS
Sbjct: 5 KVIFFDLDDTLVDTSKLAEVARKNAIENMIRHGMPVDFDTAYNELLELIKEYGSNFPYHF 64
Query: 64 ---LRALGYDI-------GADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFT 110
LR L + G YH + ++ P R L + + I T
Sbjct: 65 DYLLRRLDLEYNPKWVAAGVIAYHN-----TKFTYLREVPGARKTLLRLKKEGYMTGIIT 119
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
+ + + RLE+ D F+ ++ +F + KP K AL
Sbjct: 120 DGNPIKQWEKILRLELDDFFEHVMI--------------SDFEGVKKPHPKIFKKALKAF 165
Query: 171 NVDPRHAV 178
NV P A+
Sbjct: 166 NVKPEEAI 173
>sp|Q68VQ4|PRIM_RICTY DNA primase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=dnaG PE=3 SV=1
Length = 593
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRN----IEGFL----IEKCGFSETKAS 47
+ +VF +DTLY I+++ K+N +EG+ + + GFSE AS
Sbjct: 225 YETIVFQKNDTLYGEHKAISSSYKKNRSILVEGYFDVIALHQAGFSEVVAS 275
>sp|Q9VC57|ATLAS_DROME Atlastin OS=Drosophila melanogaster GN=atl PE=1 SV=1
Length = 541
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 112 SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149
SD+ H R I+ CF ++ CF +P L+ AT P
Sbjct: 218 SDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNP 255
>sp|P34595|YOD3_CAEEL Uncharacterized protein ZC262.3 OS=Caenorhabditis elegans
GN=ZC262.3 PE=1 SV=2
Length = 773
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 19/71 (26%)
Query: 29 RNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDL 88
RNI+ F I++ +E+ K YGS + L + H + H +L +D+
Sbjct: 53 RNIQCFSIDESKL---------LEIQKIYGSNIQRL----------ELHNWQHDQLNFDI 93
Query: 89 IKPDPQLRNLL 99
P PQL +++
Sbjct: 94 FAPFPQLEHII 104
>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBP8B7.31 PE=1 SV=2
Length = 172
Score = 30.0 bits (66), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 7 CLVFDLDDTLYP--SETGIAAAVK--RNIEGFLIEKCG 40
C+VFDLD TL+P +T + A K +N G LI+K G
Sbjct: 10 CVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYG 47
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,417,108
Number of Sequences: 539616
Number of extensions: 2780611
Number of successful extensions: 7614
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7607
Number of HSP's gapped (non-prelim): 12
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)