Query 029593
Match_columns 191
No_of_seqs 115 out of 1062
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 15:24:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029593.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029593hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 1.5E-27 3.2E-32 166.3 16.4 177 2-186 12-190 (244)
2 TIGR01993 Pyr-5-nucltdase pyri 99.9 2.1E-26 4.6E-31 163.6 16.4 170 6-186 1-170 (184)
3 PRK13288 pyrophosphatase PpaX; 99.9 2.7E-25 5.8E-30 161.6 11.9 160 4-187 2-168 (214)
4 PRK13226 phosphoglycolate phos 99.9 2.1E-25 4.5E-30 163.6 10.7 160 4-187 11-181 (229)
5 PLN02770 haloacid dehalogenase 99.9 5.4E-25 1.2E-29 163.2 12.8 160 4-187 21-194 (248)
6 PRK14988 GMP/IMP nucleotidase; 99.9 1.6E-24 3.5E-29 158.2 13.9 162 4-187 9-179 (224)
7 PRK10725 fructose-1-P/6-phosph 99.9 5.3E-25 1.2E-29 156.9 10.9 162 1-187 1-172 (188)
8 PRK11587 putative phosphatase; 99.9 1.6E-24 3.5E-29 157.9 13.3 158 4-187 2-168 (218)
9 COG0637 Predicted phosphatase/ 99.9 5.2E-25 1.1E-29 160.3 10.5 158 4-185 1-170 (221)
10 TIGR02253 CTE7 HAD superfamily 99.9 1.3E-24 2.7E-29 158.7 12.0 167 5-187 2-181 (221)
11 PLN03243 haloacid dehalogenase 99.9 6.3E-25 1.4E-29 163.3 10.3 161 4-187 23-195 (260)
12 COG0546 Gph Predicted phosphat 99.9 3.4E-24 7.5E-29 156.2 14.0 162 3-187 2-175 (220)
13 PRK10826 2-deoxyglucose-6-phos 99.9 9E-25 1.9E-29 159.7 10.8 161 4-187 6-178 (222)
14 PLN02575 haloacid dehalogenase 99.9 5.7E-24 1.2E-28 163.8 13.7 163 1-187 127-302 (381)
15 TIGR03351 PhnX-like phosphonat 99.9 5.5E-24 1.2E-28 155.3 12.4 160 5-187 1-176 (220)
16 TIGR01449 PGP_bact 2-phosphogl 99.9 1E-23 2.2E-28 153.1 11.4 157 8-187 1-171 (213)
17 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 6.7E-24 1.5E-28 150.8 10.2 157 5-187 1-172 (185)
18 TIGR01422 phosphonatase phosph 99.9 1.3E-23 2.9E-28 156.3 11.8 86 88-187 97-187 (253)
19 PRK10563 6-phosphogluconate ph 99.9 2.3E-23 4.9E-28 152.1 11.8 159 4-186 3-171 (221)
20 TIGR01428 HAD_type_II 2-haloal 99.9 2.7E-23 5.9E-28 149.3 12.0 86 88-187 90-178 (198)
21 PLN02940 riboflavin kinase 99.9 1.5E-23 3.3E-28 163.7 10.5 160 4-187 10-180 (382)
22 TIGR01990 bPGM beta-phosphoglu 99.9 1.3E-23 2.8E-28 149.3 9.1 155 7-187 1-171 (185)
23 TIGR01454 AHBA_synth_RP 3-amin 99.9 4.6E-23 1E-27 148.9 11.6 156 8-187 1-161 (205)
24 PRK13478 phosphonoacetaldehyde 99.9 6E-23 1.3E-27 153.9 12.0 86 88-187 99-189 (267)
25 PRK13222 phosphoglycolate phos 99.9 1.1E-22 2.4E-27 148.9 12.8 161 3-187 4-179 (226)
26 PRK13223 phosphoglycolate phos 99.9 4.9E-23 1.1E-27 154.5 11.1 161 4-187 12-187 (272)
27 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 8.3E-23 1.8E-27 146.7 11.5 83 90-187 106-191 (197)
28 TIGR02252 DREG-2 REG-2-like, H 99.9 1.7E-22 3.7E-27 145.7 12.8 160 6-186 1-190 (203)
29 TIGR02254 YjjG/YfnB HAD superf 99.9 4E-22 8.8E-27 145.7 13.7 162 5-187 1-184 (224)
30 PRK13225 phosphoglycolate phos 99.9 4.7E-22 1E-26 148.8 11.8 156 4-187 61-225 (273)
31 PRK09449 dUMP phosphatase; Pro 99.9 1.8E-21 4E-26 142.3 12.4 83 89-186 94-181 (224)
32 PF13419 HAD_2: Haloacid dehal 99.9 8.5E-23 1.9E-27 143.4 4.8 159 8-187 1-163 (176)
33 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 1E-21 2.2E-26 138.5 10.2 80 88-186 88-168 (175)
34 PLN02779 haloacid dehalogenase 99.9 9E-22 1.9E-26 148.5 10.3 163 4-187 39-232 (286)
35 PRK06698 bifunctional 5'-methy 99.9 2.3E-21 4.9E-26 155.4 12.3 162 4-187 240-413 (459)
36 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 5.6E-21 1.2E-25 132.0 11.7 144 7-187 1-147 (154)
37 TIGR02247 HAD-1A3-hyp Epoxide 99.9 2.8E-21 6.2E-26 140.1 9.7 86 88-187 92-182 (211)
38 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 1.2E-21 2.5E-26 139.0 6.7 83 89-186 84-169 (183)
39 COG1011 Predicted hydrolase (H 99.8 1.3E-20 2.7E-25 138.2 11.2 85 88-186 97-183 (229)
40 PRK10748 flavin mononucleotide 99.8 4.7E-20 1E-24 136.0 14.2 163 4-187 9-194 (238)
41 PRK09456 ?-D-glucose-1-phospha 99.8 6.1E-20 1.3E-24 132.0 13.1 84 89-186 83-170 (199)
42 TIGR00338 serB phosphoserine p 99.8 7.2E-20 1.6E-24 133.5 11.7 163 3-187 12-181 (219)
43 PLN02919 haloacid dehalogenase 99.8 2.9E-20 6.2E-25 160.7 10.8 160 4-187 74-248 (1057)
44 PHA02597 30.2 hypothetical pro 99.8 4.6E-19 1E-23 127.2 9.0 149 5-186 2-157 (197)
45 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 2.5E-18 5.4E-23 123.7 12.4 95 89-187 79-176 (201)
46 KOG2914 Predicted haloacid-hal 99.8 2E-18 4.3E-23 124.0 9.8 164 3-185 8-180 (222)
47 PLN02954 phosphoserine phospha 99.8 1.1E-17 2.4E-22 122.4 11.7 165 4-187 11-182 (224)
48 KOG3085 Predicted hydrolase (H 99.8 6.8E-18 1.5E-22 121.8 9.8 84 88-186 111-197 (237)
49 PRK11133 serB phosphoserine ph 99.8 1.2E-17 2.7E-22 127.4 11.5 88 89-187 180-277 (322)
50 PLN02811 hydrolase 99.7 4.3E-18 9.3E-23 124.2 8.0 152 12-187 1-170 (220)
51 PRK09552 mtnX 2-hydroxy-3-keto 99.7 2.2E-17 4.8E-22 120.4 10.4 150 6-187 4-173 (219)
52 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 1.3E-16 2.9E-21 113.4 12.2 96 89-187 71-175 (188)
53 PRK13582 thrH phosphoserine ph 99.7 5.8E-17 1.3E-21 117.0 9.4 153 5-187 1-157 (205)
54 TIGR01681 HAD-SF-IIIC HAD-supe 99.7 9.7E-17 2.1E-21 107.2 7.9 80 90-187 29-121 (128)
55 TIGR01488 HAD-SF-IB Haloacid D 99.7 4.7E-16 1E-20 109.7 11.3 97 89-187 72-171 (177)
56 TIGR01656 Histidinol-ppas hist 99.7 7.9E-17 1.7E-21 110.3 6.4 85 89-187 26-131 (147)
57 TIGR01691 enolase-ppase 2,3-di 99.7 8.8E-16 1.9E-20 111.3 11.2 83 88-186 93-181 (220)
58 PRK08942 D,D-heptose 1,7-bisph 99.7 3.3E-16 7.1E-21 111.0 8.5 88 89-187 28-133 (181)
59 COG0560 SerB Phosphoserine pho 99.6 2.6E-15 5.6E-20 108.4 11.2 166 2-187 2-173 (212)
60 TIGR01685 MDP-1 magnesium-depe 99.6 3.1E-16 6.8E-21 109.3 6.2 86 88-187 43-143 (174)
61 TIGR02137 HSK-PSP phosphoserin 99.6 2.1E-15 4.5E-20 108.4 10.6 154 6-187 2-157 (203)
62 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 1E-15 2.2E-20 103.0 7.7 81 89-187 24-117 (132)
63 cd01427 HAD_like Haloacid deha 99.6 8.9E-16 1.9E-20 103.2 7.1 98 89-186 23-125 (139)
64 PRK06769 hypothetical protein; 99.6 1.1E-15 2.4E-20 107.3 7.5 85 89-187 27-123 (173)
65 TIGR03333 salvage_mtnX 2-hydro 99.6 3.7E-15 8E-20 108.3 9.7 85 89-187 69-169 (214)
66 TIGR01672 AphA HAD superfamily 99.6 1E-14 2.2E-19 106.7 10.5 78 89-187 113-197 (237)
67 TIGR00213 GmhB_yaeD D,D-heptos 99.6 2.8E-15 6.1E-20 105.7 7.3 93 89-186 25-135 (176)
68 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 1.6E-14 3.5E-19 104.0 11.1 95 89-187 86-184 (202)
69 TIGR01261 hisB_Nterm histidino 99.6 2.6E-15 5.7E-20 103.9 6.7 83 89-187 28-133 (161)
70 PF00702 Hydrolase: haloacid d 99.6 1.2E-15 2.7E-20 110.6 3.9 78 89-187 126-208 (215)
71 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 5.9E-15 1.3E-19 102.8 7.0 78 91-184 43-137 (166)
72 PF06888 Put_Phosphatase: Puta 99.6 9E-14 2E-18 101.1 13.3 109 70-188 57-183 (234)
73 TIGR01686 FkbH FkbH-like domai 99.5 1.2E-13 2.6E-18 106.1 8.9 78 90-186 31-115 (320)
74 COG2179 Predicted hydrolase of 99.5 2.2E-13 4.9E-18 91.9 8.7 73 89-184 45-120 (175)
75 TIGR01670 YrbI-phosphatas 3-de 99.5 2.1E-14 4.6E-19 99.0 1.6 67 98-187 36-105 (154)
76 PRK05446 imidazole glycerol-ph 99.4 1.6E-12 3.6E-17 100.1 8.2 88 89-187 29-134 (354)
77 TIGR01452 PGP_euk phosphoglyco 99.4 4.4E-13 9.6E-18 101.2 4.8 86 90-186 143-232 (279)
78 TIGR01668 YqeG_hyp_ppase HAD s 99.4 4.2E-12 9.2E-17 88.9 8.4 75 89-186 42-121 (170)
79 KOG1615 Phosphoserine phosphat 99.3 7.4E-11 1.6E-15 81.7 13.7 96 88-187 86-186 (227)
80 PRK11009 aphA acid phosphatase 99.3 3.2E-12 7E-17 93.5 7.4 90 74-187 99-197 (237)
81 KOG3120 Predicted haloacid deh 99.3 1.3E-11 2.8E-16 87.0 10.1 112 70-188 70-196 (256)
82 PRK11590 hypothetical protein; 99.3 1.1E-11 2.5E-16 89.8 10.2 92 89-187 94-189 (211)
83 TIGR01544 HAD-SF-IE haloacid d 99.3 1.4E-11 3.1E-16 91.6 10.5 86 88-187 119-224 (277)
84 PHA02530 pseT polynucleotide k 99.3 4.5E-12 9.7E-17 96.7 7.4 92 89-187 186-282 (300)
85 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.3 8.1E-13 1.8E-17 98.5 2.5 85 91-186 121-209 (257)
86 smart00577 CPDc catalytic doma 99.3 4.2E-12 9.2E-17 87.0 4.5 82 89-188 44-129 (148)
87 TIGR01663 PNK-3'Pase polynucle 99.3 1.9E-11 4.1E-16 98.7 8.9 80 91-186 198-296 (526)
88 TIGR01533 lipo_e_P4 5'-nucleot 99.2 9.1E-11 2E-15 87.2 10.3 80 89-189 117-203 (266)
89 PRK08238 hypothetical protein; 99.2 1.5E-10 3.2E-15 93.1 11.7 79 89-187 71-152 (479)
90 PLN02645 phosphoglycolate phos 99.2 2.9E-11 6.3E-16 92.6 6.9 84 93-187 173-261 (311)
91 PRK01158 phosphoglycolate phos 99.2 1.7E-11 3.8E-16 89.9 5.4 32 156-187 155-186 (230)
92 COG0241 HisB Histidinol phosph 99.2 1.4E-10 3E-15 80.9 9.4 87 89-186 30-134 (181)
93 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.2 2.7E-11 5.8E-16 90.0 6.1 84 89-187 120-209 (249)
94 PRK10530 pyridoxal phosphate ( 99.2 3.5E-11 7.6E-16 90.5 5.9 31 157-187 198-228 (272)
95 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.1 1.5E-10 3.2E-15 85.7 6.8 80 89-187 23-108 (242)
96 PF12710 HAD: haloacid dehalog 99.1 3.2E-10 7E-15 80.8 8.2 89 93-187 92-188 (192)
97 PRK10444 UMP phosphatase; Prov 99.1 1.7E-10 3.6E-15 85.5 6.6 34 154-187 171-205 (248)
98 COG4229 Predicted enolase-phos 99.1 1.9E-09 4.1E-14 74.0 9.6 81 89-185 102-188 (229)
99 TIGR02244 HAD-IG-Ncltidse HAD 99.1 4E-09 8.7E-14 81.0 12.1 97 88-185 182-305 (343)
100 TIGR01545 YfhB_g-proteo haloac 99.1 8E-09 1.7E-13 74.8 12.9 92 89-187 93-188 (210)
101 TIGR02726 phenyl_P_delta pheny 99.0 3.2E-10 6.9E-15 79.0 5.1 68 97-187 41-111 (169)
102 TIGR01482 SPP-subfamily Sucros 99.0 4E-10 8.7E-15 82.4 4.0 32 156-187 147-178 (225)
103 TIGR01487 SPP-like sucrose-pho 99.0 4.3E-10 9.3E-15 81.8 4.0 65 108-187 112-176 (215)
104 TIGR01684 viral_ppase viral ph 99.0 2.1E-09 4.5E-14 80.1 6.8 99 92-191 148-269 (301)
105 COG0561 Cof Predicted hydrolas 99.0 1.3E-09 2.9E-14 81.7 5.8 33 155-187 186-218 (264)
106 KOG2882 p-Nitrophenyl phosphat 99.0 5.8E-09 1.3E-13 77.3 8.9 36 150-185 217-252 (306)
107 PRK00192 mannosyl-3-phosphogly 98.9 1.3E-09 2.8E-14 82.1 5.6 30 158-187 190-220 (273)
108 TIGR02463 MPGP_rel mannosyl-3- 98.9 1.7E-09 3.8E-14 78.9 5.5 31 157-187 178-208 (221)
109 PRK15126 thiamin pyrimidine py 98.9 1.8E-09 3.8E-14 81.4 5.3 32 156-187 186-217 (272)
110 PHA03398 viral phosphatase sup 98.9 9.5E-09 2.1E-13 76.7 8.6 99 92-191 150-271 (303)
111 PRK10513 sugar phosphate phosp 98.9 2.6E-09 5.7E-14 80.3 5.7 32 156-187 194-225 (270)
112 COG0647 NagD Predicted sugar p 98.9 1E-09 2.3E-14 81.4 2.6 33 153-185 186-218 (269)
113 PF12689 Acid_PPase: Acid Phos 98.8 5.8E-09 1.3E-13 72.4 5.5 77 89-184 44-134 (169)
114 PRK10976 putative hydrolase; P 98.8 7.4E-09 1.6E-13 77.7 6.3 32 156-187 188-219 (266)
115 PRK09484 3-deoxy-D-manno-octul 98.8 6E-09 1.3E-13 73.9 5.1 68 97-187 55-125 (183)
116 PRK03669 mannosyl-3-phosphogly 98.8 9.8E-09 2.1E-13 77.3 6.1 32 156-187 185-219 (271)
117 KOG3040 Predicted sugar phosph 98.7 1.3E-09 2.8E-14 76.5 -0.5 33 154-186 178-210 (262)
118 PF08645 PNK3P: Polynucleotide 98.7 8.6E-09 1.9E-13 71.3 3.6 80 91-186 30-130 (159)
119 TIGR01460 HAD-SF-IIA Haloacid 98.7 3.6E-08 7.9E-13 72.7 6.9 33 155-187 186-220 (236)
120 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.7 5.5E-09 1.2E-13 77.4 2.5 83 91-187 139-227 (242)
121 COG4996 Predicted phosphatase 98.7 1E-08 2.2E-13 66.7 3.1 78 89-187 40-129 (164)
122 PLN02887 hydrolase family prot 98.7 3.3E-08 7.2E-13 81.2 5.4 32 156-187 505-536 (580)
123 PTZ00445 p36-lilke protein; Pr 98.6 1E-07 2.2E-12 67.7 6.0 93 90-185 75-189 (219)
124 TIGR00099 Cof-subfamily Cof su 98.6 8.4E-08 1.8E-12 71.6 5.6 32 156-187 186-217 (256)
125 COG4359 Uncharacterized conser 98.6 1.2E-06 2.6E-11 60.6 10.3 158 6-186 4-171 (220)
126 PF08282 Hydrolase_3: haloacid 98.6 2.1E-08 4.5E-13 74.2 1.3 31 157-187 185-215 (254)
127 PF09419 PGP_phosphatase: Mito 98.6 5.1E-07 1.1E-11 62.5 8.0 55 106-184 79-146 (168)
128 TIGR02471 sucr_syn_bact_C sucr 98.5 2.6E-07 5.7E-12 68.1 6.6 32 156-187 157-188 (236)
129 TIGR01485 SPP_plant-cyano sucr 98.5 7.5E-07 1.6E-11 66.3 8.9 32 156-187 165-196 (249)
130 TIGR02251 HIF-SF_euk Dullard-l 98.4 1.4E-07 3E-12 65.6 3.0 83 89-188 41-126 (162)
131 TIGR02461 osmo_MPG_phos mannos 98.4 4.9E-07 1.1E-11 66.2 5.1 31 157-187 180-212 (225)
132 PF13242 Hydrolase_like: HAD-h 98.4 2.4E-07 5.2E-12 55.8 2.9 32 155-186 2-34 (75)
133 TIGR01675 plant-AP plant acid 98.4 7.9E-06 1.7E-10 59.5 10.8 41 89-129 119-165 (229)
134 PF03767 Acid_phosphat_B: HAD 98.4 1.4E-06 3.1E-11 63.9 6.9 87 89-189 114-207 (229)
135 TIGR01525 ATPase-IB_hvy heavy 98.4 5.7E-07 1.2E-11 74.3 5.2 74 89-187 383-460 (556)
136 TIGR01486 HAD-SF-IIB-MPGP mann 98.3 5.7E-07 1.2E-11 67.2 4.3 32 156-187 174-207 (256)
137 COG2503 Predicted secreted aci 98.3 4.5E-06 9.7E-11 60.3 8.0 125 4-190 78-209 (274)
138 PRK12702 mannosyl-3-phosphogly 98.3 3.6E-06 7.8E-11 63.2 6.8 31 157-187 207-239 (302)
139 TIGR01511 ATPase-IB1_Cu copper 98.2 2E-06 4.3E-11 71.2 5.6 73 89-187 404-479 (562)
140 TIGR01512 ATPase-IB2_Cd heavy 98.2 2.5E-06 5.4E-11 70.3 5.1 74 89-187 361-438 (536)
141 PLN02177 glycerol-3-phosphate 98.2 8.2E-06 1.8E-10 66.2 7.4 88 91-187 111-201 (497)
142 TIGR01680 Veg_Stor_Prot vegeta 98.2 6.2E-05 1.4E-09 56.0 11.4 41 89-129 144-190 (275)
143 PRK14502 bifunctional mannosyl 98.1 1.1E-05 2.4E-10 67.0 7.1 32 156-187 611-644 (694)
144 TIGR01522 ATPase-IIA2_Ca golgi 98.0 1.2E-05 2.5E-10 70.0 6.3 98 90-187 528-630 (884)
145 PRK10187 trehalose-6-phosphate 98.0 5.2E-05 1.1E-09 57.0 9.0 31 156-186 172-202 (266)
146 COG1778 Low specificity phosph 98.0 5.8E-06 1.3E-10 55.8 3.3 67 98-187 43-112 (170)
147 PF05152 DUF705: Protein of un 98.0 7.2E-05 1.6E-09 55.6 8.9 101 90-191 142-265 (297)
148 PF05116 S6PP: Sucrose-6F-phos 98.0 3.2E-05 6.9E-10 57.5 6.8 31 157-187 164-194 (247)
149 smart00775 LNS2 LNS2 domain. T 97.8 0.00021 4.6E-09 49.4 8.5 33 91-123 28-66 (157)
150 PF11019 DUF2608: Protein of u 97.8 0.00048 1E-08 51.3 10.9 30 156-185 160-189 (252)
151 PRK10671 copA copper exporting 97.8 6.5E-05 1.4E-09 65.2 7.0 74 89-187 649-725 (834)
152 COG3882 FkbH Predicted enzyme 97.8 7.7E-05 1.7E-09 59.2 6.6 81 89-184 254-337 (574)
153 TIGR01456 CECR5 HAD-superfamil 97.7 4.8E-06 1E-10 64.3 -0.9 21 7-27 2-22 (321)
154 COG2217 ZntA Cation transport 97.7 8.4E-05 1.8E-09 62.7 5.8 72 90-186 537-611 (713)
155 PF06941 NT5C: 5' nucleotidase 97.7 2.1E-05 4.6E-10 56.1 1.8 29 86-114 69-100 (191)
156 PTZ00174 phosphomannomutase; P 97.7 3.4E-05 7.3E-10 57.4 2.9 33 1-33 1-33 (247)
157 TIGR02250 FCP1_euk FCP1-like p 97.6 0.00014 3E-09 50.2 4.8 78 89-185 57-138 (156)
158 PRK14010 potassium-transportin 97.5 0.00029 6.2E-09 59.4 6.9 72 90-186 441-515 (673)
159 PRK01122 potassium-transportin 97.5 0.00036 7.8E-09 58.9 6.8 72 90-186 445-519 (679)
160 PRK11033 zntA zinc/cadmium/mer 97.4 0.00042 9.2E-09 59.4 7.0 71 90-187 568-641 (741)
161 TIGR01497 kdpB K+-transporting 97.4 0.00038 8.3E-09 58.6 6.5 73 90-187 446-521 (675)
162 TIGR01116 ATPase-IIA1_Ca sarco 97.4 0.00062 1.4E-08 59.8 7.2 98 90-187 537-643 (917)
163 KOG0207 Cation transport ATPas 97.2 0.00085 1.8E-08 57.2 6.4 72 90-186 723-797 (951)
164 TIGR01647 ATPase-IIIA_H plasma 97.2 0.00049 1.1E-08 59.2 4.7 94 90-186 442-546 (755)
165 COG4087 Soluble P-type ATPase 97.2 0.0018 3.8E-08 42.7 6.2 76 88-187 28-106 (152)
166 PF05761 5_nucleotid: 5' nucle 97.2 0.00077 1.7E-08 54.2 5.1 97 87-184 180-305 (448)
167 PRK10517 magnesium-transportin 97.1 0.0015 3.2E-08 57.3 6.3 93 90-186 550-649 (902)
168 PRK15122 magnesium-transportin 97.0 0.0015 3.2E-08 57.3 6.1 94 90-186 550-649 (903)
169 TIGR01524 ATPase-IIIB_Mg magne 97.0 0.002 4.4E-08 56.3 6.8 94 90-186 515-614 (867)
170 KOG2630 Enolase-phosphatase E- 97.0 0.014 3E-07 42.3 9.7 79 90-184 123-207 (254)
171 TIGR01517 ATPase-IIB_Ca plasma 97.0 0.0015 3.2E-08 57.7 5.6 97 90-186 579-680 (941)
172 COG3769 Predicted hydrolase (H 96.9 0.0063 1.4E-07 43.8 7.4 28 160-187 193-222 (274)
173 TIGR01523 ATPase-IID_K-Na pota 96.7 0.0038 8.2E-08 55.7 6.2 97 90-186 646-757 (1053)
174 COG0474 MgtA Cation transport 96.7 0.0042 9E-08 54.7 6.3 98 89-186 546-650 (917)
175 TIGR01484 HAD-SF-IIB HAD-super 96.6 0.0014 3.1E-08 47.1 2.5 32 156-187 161-192 (204)
176 PLN02423 phosphomannomutase 96.6 0.0016 3.4E-08 48.4 2.6 31 4-34 5-36 (245)
177 TIGR01456 CECR5 HAD-superfamil 96.5 0.0028 6.1E-08 49.0 3.2 34 153-186 229-276 (321)
178 KOG0202 Ca2+ transporting ATPa 96.4 0.009 1.9E-07 50.9 6.0 97 90-186 584-689 (972)
179 PF08235 LNS2: LNS2 (Lipin/Ned 96.3 0.025 5.3E-07 38.9 6.6 14 7-20 1-14 (157)
180 PF13344 Hydrolase_6: Haloacid 96.2 0.024 5.1E-07 36.1 6.0 49 89-137 13-67 (101)
181 PLN02645 phosphoglycolate phos 96.2 0.02 4.3E-07 44.2 6.4 48 90-137 44-97 (311)
182 TIGR02245 HAD_IIID1 HAD-superf 96.2 0.019 4.1E-07 41.1 5.8 39 89-127 44-84 (195)
183 COG4030 Uncharacterized protei 96.1 0.23 5E-06 36.3 11.1 38 89-126 82-121 (315)
184 TIGR01106 ATPase-IIC_X-K sodiu 96.1 0.022 4.7E-07 50.8 6.9 38 90-127 568-608 (997)
185 TIGR01494 ATPase_P-type ATPase 96.0 0.02 4.4E-07 47.1 6.2 72 89-188 346-420 (499)
186 TIGR01689 EcbF-BcbF capsule bi 95.8 0.006 1.3E-07 40.4 1.9 15 6-20 2-16 (126)
187 PLN02499 glycerol-3-phosphate 95.6 0.12 2.6E-06 42.1 8.7 31 98-128 101-134 (498)
188 TIGR01452 PGP_euk phosphoglyco 95.6 0.05 1.1E-06 41.2 6.5 47 90-136 18-70 (279)
189 PLN02382 probable sucrose-phos 95.2 0.017 3.6E-07 46.3 3.0 31 157-187 174-207 (413)
190 PRK09484 3-deoxy-D-manno-octul 95.1 0.011 2.5E-07 41.8 1.5 16 4-19 20-35 (183)
191 TIGR01657 P-ATPase-V P-type AT 95.1 0.079 1.7E-06 47.6 6.9 39 90-128 656-697 (1054)
192 TIGR00685 T6PP trehalose-phosp 94.8 0.029 6.3E-07 41.6 3.1 29 159-187 168-196 (244)
193 PF13344 Hydrolase_6: Haloacid 94.8 0.0097 2.1E-07 37.9 0.4 19 8-26 1-19 (101)
194 TIGR01484 HAD-SF-IIB HAD-super 94.8 0.019 4E-07 41.3 1.8 27 7-33 1-28 (204)
195 PF03031 NIF: NLI interacting 94.4 0.02 4.4E-07 39.4 1.3 82 89-187 35-119 (159)
196 COG0647 NagD Predicted sugar p 94.3 0.12 2.7E-06 38.9 5.4 51 87-137 21-78 (269)
197 TIGR02726 phenyl_P_delta pheny 94.3 0.023 5.1E-07 39.7 1.4 17 4-20 6-22 (169)
198 COG1778 Low specificity phosph 93.9 0.033 7.2E-07 38.0 1.4 17 4-20 7-23 (170)
199 COG2216 KdpB High-affinity K+ 93.7 0.16 3.5E-06 41.4 5.2 72 90-186 447-521 (681)
200 KOG2470 Similar to IMP-GMP spe 93.4 0.1 2.2E-06 40.4 3.5 95 89-184 239-356 (510)
201 PF03031 NIF: NLI interacting 93.0 0.038 8.2E-07 38.0 0.7 16 6-21 1-16 (159)
202 TIGR01652 ATPase-Plipid phosph 92.2 0.45 9.7E-06 43.0 6.4 38 90-127 631-671 (1057)
203 KOG3107 Predicted haloacid deh 92.1 1.9 4.2E-05 34.0 8.7 57 108-183 375-433 (468)
204 COG3700 AphA Acid phosphatase 91.7 0.38 8.2E-06 33.8 4.2 75 90-187 114-197 (237)
205 COG5610 Predicted hydrolase (H 91.5 0.84 1.8E-05 36.9 6.4 80 91-184 100-184 (635)
206 TIGR00685 T6PP trehalose-phosp 91.3 0.13 2.8E-06 38.2 1.8 16 4-19 2-17 (244)
207 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.3 0.4 8.7E-06 35.7 3.6 48 90-137 17-70 (249)
208 PRK10444 UMP phosphatase; Prov 90.1 1.2 2.7E-05 33.2 6.1 96 90-189 17-123 (248)
209 COG4502 5'(3')-deoxyribonucleo 90.0 0.31 6.8E-06 32.7 2.5 50 88-137 66-123 (180)
210 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.9 0.39 8.4E-06 36.0 2.7 47 90-136 21-73 (257)
211 TIGR01658 EYA-cons_domain eyes 88.7 1.6 3.5E-05 32.3 5.6 59 108-184 180-240 (274)
212 PLN03017 trehalose-phosphatase 88.7 0.35 7.6E-06 38.1 2.3 30 158-187 283-315 (366)
213 PF05761 5_nucleotid: 5' nucle 87.5 0.79 1.7E-05 37.3 3.8 42 3-44 10-52 (448)
214 PLN02423 phosphomannomutase 87.3 0.38 8.3E-06 35.7 1.8 27 156-187 187-217 (245)
215 PLN03063 alpha,alpha-trehalose 86.3 1.1 2.4E-05 39.3 4.2 27 158-184 678-710 (797)
216 smart00577 CPDc catalytic doma 86.1 0.5 1.1E-05 32.1 1.7 16 5-20 2-17 (148)
217 PRK14501 putative bifunctional 85.5 0.49 1.1E-05 41.0 1.8 29 157-187 656-684 (726)
218 PLN02151 trehalose-phosphatase 85.5 0.62 1.3E-05 36.6 2.1 30 158-187 269-301 (354)
219 KOG2469 IMP-GMP specific 5'-nu 85.5 1.8 3.8E-05 34.5 4.5 94 90-185 198-315 (424)
220 PTZ00174 phosphomannomutase; P 85.5 0.67 1.4E-05 34.5 2.2 28 156-187 186-217 (247)
221 TIGR02251 HIF-SF_euk Dullard-l 85.3 0.57 1.2E-05 32.5 1.7 16 6-21 2-17 (162)
222 PLN02580 trehalose-phosphatase 85.2 0.53 1.2E-05 37.4 1.7 31 157-187 300-333 (384)
223 COG1877 OtsB Trehalose-6-phosp 85.1 0.59 1.3E-05 35.2 1.8 30 158-187 182-211 (266)
224 KOG3189 Phosphomannomutase [Li 84.7 0.81 1.8E-05 32.8 2.2 28 6-33 12-39 (252)
225 PRK10513 sugar phosphate phosp 84.4 2.9 6.3E-05 31.3 5.3 40 89-128 19-61 (270)
226 TIGR02250 FCP1_euk FCP1-like p 84.0 0.95 2.1E-05 31.2 2.3 18 4-21 5-22 (156)
227 PRK00192 mannosyl-3-phosphogly 83.9 2.7 5.8E-05 31.7 5.0 41 90-130 21-64 (273)
228 PLN02205 alpha,alpha-trehalose 82.8 0.86 1.9E-05 40.2 2.1 32 156-187 760-794 (854)
229 KOG0204 Calcium transporting A 82.5 2.6 5.6E-05 36.9 4.6 39 90-128 647-688 (1034)
230 PRK14501 putative bifunctional 82.0 1.3 2.9E-05 38.4 2.9 15 4-18 491-505 (726)
231 TIGR01460 HAD-SF-IIA Haloacid 81.8 8.8 0.00019 28.3 6.9 48 89-136 13-67 (236)
232 COG5083 SMP2 Uncharacterized p 81.3 0.78 1.7E-05 36.8 1.1 18 4-21 374-391 (580)
233 TIGR01487 SPP-like sucrose-pho 81.1 3.3 7.2E-05 29.9 4.4 40 89-128 17-59 (215)
234 PLN02382 probable sucrose-phos 80.3 1.4 3.1E-05 35.5 2.4 28 156-183 245-276 (413)
235 TIGR02463 MPGP_rel mannosyl-3- 79.9 4.4 9.6E-05 29.3 4.7 37 91-127 17-56 (221)
236 PF02358 Trehalose_PPase: Treh 78.9 2.5 5.5E-05 31.1 3.2 31 157-187 164-197 (235)
237 KOG3040 Predicted sugar phosph 78.6 12 0.00026 27.3 6.2 47 89-135 22-74 (262)
238 PRK01158 phosphoglycolate phos 78.5 4.8 0.0001 29.2 4.6 39 90-128 20-61 (230)
239 KOG4549 Magnesium-dependent ph 78.5 9.8 0.00021 25.3 5.3 80 89-183 43-131 (144)
240 PRK15126 thiamin pyrimidine py 78.1 5 0.00011 30.1 4.7 40 89-128 18-60 (272)
241 KOG2134 Polynucleotide kinase 78.1 1.1 2.5E-05 35.3 1.1 18 4-21 74-91 (422)
242 KOG2882 p-Nitrophenyl phosphat 78.0 7.3 0.00016 29.9 5.3 39 89-127 37-81 (306)
243 TIGR02461 osmo_MPG_phos mannos 77.9 4.2 9.1E-05 29.8 4.1 38 91-128 16-56 (225)
244 TIGR00099 Cof-subfamily Cof su 77.5 5.9 0.00013 29.4 4.9 38 90-127 16-56 (256)
245 PLN02205 alpha,alpha-trehalose 76.9 2.2 4.7E-05 37.8 2.7 17 4-20 595-611 (854)
246 PRK10976 putative hydrolase; P 75.7 6.4 0.00014 29.4 4.7 40 89-128 18-60 (266)
247 PLN02580 trehalose-phosphatase 75.7 2.8 6E-05 33.4 2.7 17 4-20 118-134 (384)
248 PF08282 Hydrolase_3: haloacid 75.2 5.8 0.00013 28.8 4.3 39 89-127 14-55 (254)
249 TIGR01482 SPP-subfamily Sucros 74.2 7.1 0.00015 28.2 4.5 38 90-127 15-55 (225)
250 PRK10530 pyridoxal phosphate ( 73.6 6.7 0.00014 29.3 4.3 39 90-128 20-61 (272)
251 COG0561 Cof Predicted hydrolas 73.4 7.5 0.00016 29.0 4.5 40 89-128 19-61 (264)
252 PRK12702 mannosyl-3-phosphogly 71.9 9.7 0.00021 29.3 4.7 39 90-128 18-59 (302)
253 KOG2469 IMP-GMP specific 5'-nu 70.8 4.5 9.7E-05 32.3 2.8 40 4-43 26-65 (424)
254 KOG2018 Predicted dinucleotide 70.6 34 0.00074 26.7 7.3 47 93-139 177-247 (430)
255 TIGR01486 HAD-SF-IIB-MPGP mann 70.4 11 0.00023 28.1 4.7 37 91-127 17-56 (256)
256 COG5663 Uncharacterized conser 69.5 12 0.00027 26.2 4.3 17 5-21 6-22 (194)
257 PF05822 UMPH-1: Pyrimidine 5' 69.3 46 0.00099 25.0 7.8 52 71-126 75-129 (246)
258 KOG1605 TFIIF-interacting CTD 67.9 3.7 8.1E-05 30.9 1.8 17 4-20 88-104 (262)
259 PLN03064 alpha,alpha-trehalose 67.1 3.6 7.7E-05 36.8 1.8 28 156-183 766-799 (934)
260 TIGR02468 sucrsPsyn_pln sucros 66.3 11 0.00024 34.3 4.5 32 157-188 955-988 (1050)
261 KOG1618 Predicted phosphatase 66.3 1.8 3.9E-05 33.4 -0.2 20 5-24 35-54 (389)
262 KOG0209 P-type ATPase [Inorgan 65.1 17 0.00036 32.3 5.2 40 89-128 674-716 (1160)
263 PRK03669 mannosyl-3-phosphogly 63.5 15 0.00033 27.5 4.4 38 90-127 24-64 (271)
264 PF06437 ISN1: IMP-specific 5' 62.6 7.7 0.00017 30.8 2.6 26 159-184 350-379 (408)
265 COG0731 Fe-S oxidoreductases [ 61.1 28 0.00061 26.8 5.3 35 88-122 90-128 (296)
266 cd06539 CIDE_N_A CIDE_N domain 61.0 7 0.00015 23.5 1.7 17 5-21 40-56 (78)
267 cd06537 CIDE_N_B CIDE_N domain 60.7 6.9 0.00015 23.7 1.7 17 5-21 39-55 (81)
268 COG4850 Uncharacterized conser 58.8 41 0.00089 26.3 5.8 35 89-123 195-233 (373)
269 PF09269 DUF1967: Domain of un 57.6 10 0.00022 22.2 2.0 25 161-185 43-67 (69)
270 smart00266 CAD Domains present 57.4 8.4 0.00018 22.9 1.6 17 5-21 38-54 (74)
271 PF03671 Ufm1: Ubiquitin fold 56.3 17 0.00037 21.4 2.7 24 157-180 26-49 (76)
272 COG1179 Dinucleotide-utilizing 56.0 16 0.00034 27.4 3.1 89 97-187 23-117 (263)
273 KOG3128 Uncharacterized conser 52.1 13 0.00027 28.0 2.1 37 88-124 136-175 (298)
274 cd01615 CIDE_N CIDE_N domain, 51.8 12 0.00025 22.6 1.6 17 5-21 40-56 (78)
275 COG2241 CobL Precorrin-6B meth 51.7 21 0.00046 26.0 3.2 24 157-180 100-123 (210)
276 cd06536 CIDE_N_ICAD CIDE_N dom 50.7 12 0.00027 22.6 1.6 16 6-21 43-58 (80)
277 COG0381 WecB UDP-N-acetylgluco 50.1 69 0.0015 25.7 6.0 73 94-184 18-103 (383)
278 TIGR01485 SPP_plant-cyano sucr 49.2 41 0.00089 24.8 4.6 34 93-126 24-60 (249)
279 cd06538 CIDE_N_FSP27 CIDE_N do 48.6 14 0.0003 22.3 1.6 16 6-21 40-55 (79)
280 cd02071 MM_CoA_mut_B12_BD meth 47.2 35 0.00076 22.2 3.6 43 90-132 62-109 (122)
281 PF02358 Trehalose_PPase: Treh 45.3 12 0.00027 27.4 1.3 13 9-21 1-13 (235)
282 COG1208 GCD1 Nucleoside-diphos 44.5 1.4E+02 0.0031 23.6 7.2 76 92-186 32-112 (358)
283 COG2897 SseA Rhodanese-related 44.1 36 0.00079 26.1 3.6 34 156-189 71-104 (285)
284 KOG2116 Protein involved in pl 43.1 13 0.00029 31.7 1.2 17 5-21 530-546 (738)
285 PF04273 DUF442: Putative phos 42.2 74 0.0016 20.5 4.4 63 97-179 18-91 (110)
286 COG1212 KdsB CMP-2-keto-3-deox 41.8 1.5E+02 0.0032 22.2 6.8 11 160-170 107-117 (247)
287 PF02017 CIDE-N: CIDE-N domain 41.6 21 0.00045 21.5 1.6 16 6-21 41-56 (78)
288 PLN02887 hydrolase family prot 40.9 53 0.0011 28.0 4.4 39 89-127 324-365 (580)
289 TIGR03595 Obg_CgtA_exten Obg f 40.9 36 0.00078 19.8 2.6 24 161-184 43-66 (69)
290 KOG2961 Predicted hydrolase (H 40.6 33 0.00071 23.8 2.6 30 4-33 42-72 (190)
291 TIGR01501 MthylAspMutase methy 40.6 1.1E+02 0.0024 20.5 6.2 66 68-137 36-118 (134)
292 smart00455 RBD Raf-like Ras-bi 40.0 31 0.00068 20.1 2.2 25 156-180 19-43 (70)
293 TIGR00236 wecB UDP-N-acetylglu 38.6 97 0.0021 24.2 5.5 41 94-134 15-60 (365)
294 PRK14502 bifunctional mannosyl 38.0 72 0.0016 27.8 4.8 37 91-127 434-473 (694)
295 KOG0541 Alkyl hydroperoxide re 37.7 64 0.0014 22.4 3.6 43 90-132 62-108 (171)
296 KOG2836 Protein tyrosine phosp 36.5 66 0.0014 21.7 3.5 72 90-180 25-102 (173)
297 PF14314 Methyltrans_Mon: Viru 36.2 33 0.00072 29.7 2.6 23 161-183 310-332 (675)
298 PRK02261 methylaspartate mutas 36.1 1E+02 0.0022 20.7 4.5 44 90-137 66-120 (137)
299 PF07859 Abhydrolase_3: alpha/ 35.4 14 0.00031 26.2 0.3 24 161-184 54-80 (211)
300 cd01773 Faf1_like1_UBX Faf1 ik 34.5 40 0.00086 20.5 2.1 18 166-183 64-81 (82)
301 TIGR00640 acid_CoA_mut_C methy 34.4 68 0.0015 21.4 3.4 40 92-131 67-111 (132)
302 KOG0323 TFIIF-interacting CTD 34.0 67 0.0015 27.7 4.0 51 88-138 199-253 (635)
303 PRK00994 F420-dependent methyl 33.9 2.1E+02 0.0045 21.6 6.8 26 157-185 73-98 (277)
304 PF08620 RPAP1_C: RPAP1-like, 33.7 15 0.00032 21.8 0.1 9 9-17 4-12 (73)
305 PF15214 PXT1: Peroxisomal tes 33.6 15 0.00033 19.6 0.2 8 179-186 5-12 (51)
306 PRK10187 trehalose-6-phosphate 32.4 63 0.0014 24.3 3.4 36 90-125 36-75 (266)
307 PLN03190 aminophospholipid tra 30.8 62 0.0013 30.3 3.5 37 90-126 726-765 (1178)
308 PF06437 ISN1: IMP-specific 5' 30.1 34 0.00073 27.4 1.6 18 4-21 146-163 (408)
309 PF02196 RBD: Raf-like Ras-bin 30.0 65 0.0014 18.8 2.5 25 156-180 20-44 (71)
310 PRK10425 DNase TatD; Provision 30.0 2.4E+02 0.0052 21.2 6.8 32 91-122 13-47 (258)
311 PF02350 Epimerase_2: UDP-N-ac 29.9 51 0.0011 25.9 2.6 69 101-184 2-78 (346)
312 PLN02588 glycerol-3-phosphate 29.7 29 0.00064 28.9 1.2 17 5-21 50-66 (525)
313 cd00153 RalGDS_RA Ubiquitin do 29.6 98 0.0021 19.0 3.1 31 159-189 29-73 (87)
314 COG4344 Uncharacterized protei 28.6 67 0.0015 22.0 2.5 34 90-123 43-78 (175)
315 cd07043 STAS_anti-anti-sigma_f 28.5 88 0.0019 18.8 3.1 36 95-131 59-96 (99)
316 cd02072 Glm_B12_BD B12 binding 28.4 1E+02 0.0022 20.5 3.4 61 68-128 34-111 (128)
317 TIGR02471 sucr_syn_bact_C sucr 28.4 1.6E+02 0.0035 21.4 4.9 13 7-19 1-13 (236)
318 KOG0210 P-type ATPase [Inorgan 28.3 1.8E+02 0.004 25.7 5.5 81 87-186 708-793 (1051)
319 PLN02151 trehalose-phosphatase 28.1 67 0.0015 25.5 2.9 14 5-18 98-111 (354)
320 PF08735 DUF1786: Putative pyr 27.7 2.1E+02 0.0045 21.7 5.2 31 112-142 60-91 (254)
321 PLN03017 trehalose-phosphatase 27.5 70 0.0015 25.6 2.9 29 5-33 111-144 (366)
322 PLN03190 aminophospholipid tra 27.1 36 0.00077 31.7 1.4 27 157-186 857-883 (1178)
323 PRK10344 DNA-binding transcrip 26.8 33 0.00072 21.2 0.8 22 157-178 44-65 (92)
324 PRK13762 tRNA-modifying enzyme 26.5 89 0.0019 24.4 3.3 27 89-115 141-170 (322)
325 PF14213 DUF4325: Domain of un 26.3 1.4E+02 0.0031 17.4 3.8 24 6-29 18-41 (74)
326 PRK13717 conjugal transfer pro 26.3 27 0.00059 23.1 0.4 14 4-17 44-57 (128)
327 PF06901 FrpC: RTX iron-regula 26.2 44 0.00095 24.0 1.4 14 6-19 59-72 (271)
328 PF04007 DUF354: Protein of un 26.1 75 0.0016 25.0 2.9 34 93-126 14-49 (335)
329 KOG1461 Translation initiation 26.0 4E+02 0.0086 23.2 7.0 81 91-186 54-139 (673)
330 COG1872 Uncharacterized conser 26.0 1.4E+02 0.003 19.1 3.5 29 152-180 45-73 (102)
331 COG3423 Nlp Predicted transcri 26.0 31 0.00066 20.7 0.5 22 157-178 44-65 (82)
332 PF04413 Glycos_transf_N: 3-De 25.9 1E+02 0.0022 21.9 3.3 25 162-186 159-183 (186)
333 PF03612 EIIBC-GUT_N: Sorbitol 25.4 44 0.00096 23.7 1.3 13 5-17 63-75 (183)
334 PF06117 DUF957: Enterobacteri 24.8 1.5E+02 0.0032 17.0 3.1 23 6-29 25-47 (65)
335 COG3655 Predicted transcriptio 24.8 1.1E+02 0.0024 18.2 2.7 24 160-183 45-68 (73)
336 PF03603 DNA_III_psi: DNA poly 24.6 1.4E+02 0.0031 19.8 3.6 19 162-180 53-71 (128)
337 PF06189 5-nucleotidase: 5'-nu 24.6 33 0.00072 25.9 0.7 15 7-21 123-137 (264)
338 PF13443 HTH_26: Cro/C1-type H 24.4 22 0.00049 19.8 -0.2 23 157-179 37-59 (63)
339 PF13319 DUF4090: Protein of u 23.8 1.7E+02 0.0038 17.5 4.0 13 9-21 12-24 (84)
340 PF02594 DUF167: Uncharacteris 23.6 1.2E+02 0.0025 18.2 2.8 29 151-179 34-62 (77)
341 PF08541 ACP_syn_III_C: 3-Oxoa 23.5 1.5E+02 0.0032 17.8 3.4 22 157-178 18-39 (90)
342 cd08071 MPN_DUF2466 Mov34/MPN/ 22.9 1.5E+02 0.0032 19.1 3.4 28 161-190 85-112 (113)
343 PRK11867 2-oxoglutarate ferred 22.8 1E+02 0.0022 23.6 3.0 25 159-183 28-52 (286)
344 PF12844 HTH_19: Helix-turn-he 22.7 33 0.00071 19.1 0.3 21 157-177 38-58 (64)
345 PF06415 iPGM_N: BPG-independe 22.7 2.5E+02 0.0054 20.8 4.8 54 88-141 9-76 (223)
346 cd01445 TST_Repeats Thiosulfat 22.4 2.4E+02 0.0052 18.8 4.5 27 156-182 76-103 (138)
347 PRK14129 heat shock protein Hs 21.9 88 0.0019 20.0 2.0 17 4-20 18-34 (105)
348 TIGR00221 nagA N-acetylglucosa 21.6 4.3E+02 0.0093 21.2 7.2 22 90-111 174-195 (380)
349 COG0657 Aes Esterase/lipase [L 21.6 98 0.0021 23.7 2.8 23 162-184 136-161 (312)
350 PRK13663 hypothetical protein; 21.5 3.1E+02 0.0066 22.6 5.3 58 89-146 88-165 (493)
351 PF14026 DUF4242: Protein of u 21.5 1.5E+02 0.0032 17.7 2.9 22 157-178 54-75 (77)
352 PF08013 Tagatose_6_P_K: Tagat 21.3 3E+02 0.0066 22.5 5.3 70 105-184 17-92 (424)
353 KOG4388 Hormone-sensitive lipa 21.2 99 0.0021 26.6 2.8 17 168-184 462-478 (880)
354 PRK10671 copA copper exporting 21.0 65 0.0014 28.8 1.8 18 4-21 516-533 (834)
355 PF04787 Pox_H7: Late protein 20.9 1.3E+02 0.0029 20.5 2.8 31 160-190 20-51 (147)
356 TIGR02495 NrdG2 anaerobic ribo 20.6 2E+02 0.0043 20.1 4.0 27 89-115 73-102 (191)
357 PTZ00397 macrophage migration 20.6 1.4E+02 0.003 19.1 3.0 20 161-180 80-99 (116)
358 PF02593 dTMP_synthase: Thymid 20.5 3.6E+02 0.0078 19.9 5.6 71 89-177 58-137 (217)
359 TIGR02886 spore_II_AA anti-sig 20.1 1.4E+02 0.0031 18.4 2.9 34 96-130 61-96 (106)
360 PF12990 DUF3874: Domain of un 20.0 1.7E+02 0.0037 17.4 2.9 35 94-128 27-62 (73)
361 PRK06856 DNA polymerase III su 20.0 1.6E+02 0.0034 19.6 3.1 20 162-181 52-71 (128)
362 COG4957 Predicted transcriptio 20.0 75 0.0016 21.4 1.5 31 129-176 73-103 (148)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.96 E-value=1.5e-27 Score=166.25 Aligned_cols=177 Identities=51% Similarity=0.860 Sum_probs=166.1
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhh
Q 029593 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVH 81 (191)
Q Consensus 2 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (191)
.+++++++||+|.||++....+..+.++.+.+++.+++|++..++..+....+..||...+++...+...+..+|++.+.
T Consensus 12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~ 91 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVH 91 (244)
T ss_pred CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhh
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCChhHHHHHHhhccCc-EEEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593 82 GRLPYDLIKPDPQLRNLLCSITQRK-IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (191)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~l~~~g-~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~ 160 (191)
+++++..++|.+..+++|-.|++++ ++.||+++.++...++.+|+.++|+.+++.+...+ .+..+..||.+
T Consensus 92 ~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np--------~~~~~vcKP~~ 163 (244)
T KOG3109|consen 92 GRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP--------IEKTVVCKPSE 163 (244)
T ss_pred ccCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC--------CCCceeecCCH
Confidence 9999888999999999999999984 59999999999999999999999999999887664 36778889999
Q ss_pred HHHHHHHHHcCCC-CCceEEecCcccc
Q 029593 161 DAMKLALHVANVD-PRHAVRQSSFLIF 186 (191)
Q Consensus 161 ~~~~~~~~~~~~~-p~~~i~iGDs~~~ 186 (191)
.+|+.+.+..|+. |+++++|.||.+.
T Consensus 164 ~afE~a~k~agi~~p~~t~FfDDS~~N 190 (244)
T KOG3109|consen 164 EAFEKAMKVAGIDSPRNTYFFDDSERN 190 (244)
T ss_pred HHHHHHHHHhCCCCcCceEEEcCchhh
Confidence 9999999999997 9999999999764
No 2
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.95 E-value=2.1e-26 Score=163.62 Aligned_cols=170 Identities=49% Similarity=0.812 Sum_probs=134.2
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCCC
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP 85 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (191)
++|+|||||||+|+...+..++.+++.+++.+..|++..+...+...++..++.....+... .....+.+...+.....
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999999988888888888777778889987776666666666666554443332 23445566666655333
Q ss_pred CCCCCCChhHHHHHHhhccCcEEEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 86 YDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 86 ~~~~~~~~~~~~~l~~l~~~g~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
.....++||+.++|+.|+..-.++||++...+...++.+|+..+|+.++++++.+.. ...+||+|.+++.
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------~~~~KP~p~~~~~ 149 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD----------YLLPKPSPQAYEK 149 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc----------cCCCCCCHHHHHH
Confidence 345779999999999999543399999999999999999999999999999877640 0113999999999
Q ss_pred HHHHcCCCCCceEEecCcccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+++++|++|++|++|||+..|
T Consensus 150 ~~~~~~~~~~~~l~vgD~~~d 170 (184)
T TIGR01993 150 ALREAGVDPERAIFFDDSARN 170 (184)
T ss_pred HHHHhCCCccceEEEeCCHHH
Confidence 999999999999999999865
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.93 E-value=2.7e-25 Score=161.58 Aligned_cols=160 Identities=17% Similarity=0.222 Sum_probs=115.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhhhhhc
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFVHG 82 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (191)
++++|+||+||||+|+...+..++..++ ++++........ .....|.... .+..+. ....+.+...+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~-----~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~ 71 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTL-----KTYYPNQYKRED----VLPFIGPSLHDTFSKID-ESKVEEMITTYRE 71 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHH-----HHhCCCCCCHHH----HHHHhCcCHHHHHHhcC-HHHHHHHHHHHHH
Confidence 4799999999999999998888888744 443432111111 1222333322 222221 1111222221211
Q ss_pred ---CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593 83 ---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (191)
Q Consensus 83 ---~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (191)
........++||+.++|..|+++|+ |+||+....+...++.+|+..+|+.++++++... +
T Consensus 72 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------~ 137 (214)
T PRK13288 72 FNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------A 137 (214)
T ss_pred HHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC--------------C
Confidence 1112336789999999999999886 9999999999999999999999999999888776 4
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
||+|.+++.++++++++|+++++|||+++|.
T Consensus 138 Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di 168 (214)
T PRK13288 138 KPDPEPVLKALELLGAKPEEALMVGDNHHDI 168 (214)
T ss_pred CCCcHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 9999999999999999999999999999885
No 4
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=2.1e-25 Score=163.61 Aligned_cols=160 Identities=18% Similarity=0.106 Sum_probs=115.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCc-------cc
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGA-------DD 75 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~ 75 (191)
++|+|+|||||||+|+...+..++.. ..+++|.+........ ...|.... .+......... +.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLR----PVVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 57999999999999999988888887 4566776532222211 11122211 11111111111 11
Q ss_pred hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593 76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (191)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (191)
+...+.... .....++||+.++++.|+++|+ ++||++...+...++++++..+|+.+++++..+.
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------- 149 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE----------- 149 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence 222222211 1236889999999999999986 9999999888999999999999999998887665
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|+++..+++++|++|++|++|||+.+|.
T Consensus 150 ---~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di 181 (229)
T PRK13226 150 ---RKPHPLPLLVAAERIGVAPTDCVYVGDDERDI 181 (229)
T ss_pred ---CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHH
Confidence 49999999999999999999999999999874
No 5
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=5.4e-25 Score=163.19 Aligned_cols=160 Identities=24% Similarity=0.247 Sum_probs=114.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHHhcccHH-HHHHcCCC-CC-c---
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF----SETKASSLRVELFKAYGSTLA-GLRALGYD-IG-A--- 73 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~-~--- 73 (191)
++++|+|||||||+|+...+..++.+++ ++.|. +..... . .....|.... .+..+... .. .
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~-----~~~g~~~g~~~~~~~-~---~~~~~G~~~~~~~~~~~~~~~~~~~~~ 91 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREML-----QEINFNGGVPITEEF-F---VENIAGKHNEDIALGLFPDDLERGLKF 91 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHH-----HHhccccCCCCCHHH-H---HHHcCCCCHHHHHHHHcCcchhhHHHH
Confidence 6899999999999999998888888754 44432 211111 0 0011122211 11111111 00 0
Q ss_pred -cchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCC
Q 029593 74 -DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (191)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~ 149 (191)
..+...+.. .......++||+.++|+.|+++|+ |+||+....++..++++++..+|+.++++++...
T Consensus 92 ~~~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~-------- 162 (248)
T PLN02770 92 TDDKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH-------- 162 (248)
T ss_pred HHHHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC--------
Confidence 011111111 112347889999999999999987 9999999999999999999999999999998876
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|+++..++++++++|++|++|||++.|.
T Consensus 163 ------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di 194 (248)
T PLN02770 163 ------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGI 194 (248)
T ss_pred ------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHH
Confidence 49999999999999999999999999999874
No 6
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.92 E-value=1.6e-24 Score=158.25 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=113.0
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc-----HHHH-HHcCCCCCccchh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGL-RALGYDIGADDYH 77 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~ 77 (191)
++|+|+|||||||+|+... ...|.....+.+.+..|.+...........+...... .... ...+.. ...+.
T Consensus 9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 85 (224)
T PRK14988 9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICAMT 85 (224)
T ss_pred cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHHHH
Confidence 6899999999999996421 2234333333455677887654443322111111110 0111 111111 11111
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (191)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (191)
.. ......++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++.+.
T Consensus 86 ~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~------------- 147 (224)
T PRK14988 86 TE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY------------- 147 (224)
T ss_pred HH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC-------------
Confidence 11 12347899999999999999986 9999999999999999999999999999988776
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|++|..+++++|++|++|++|||+++|.
T Consensus 148 -~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di 179 (224)
T PRK14988 148 -PKEDQRLWQAVAEHTGLKAERTLFIDDSEPIL 179 (224)
T ss_pred -CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence 49999999999999999999999999998763
No 7
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=5.3e-25 Score=156.92 Aligned_cols=162 Identities=18% Similarity=0.229 Sum_probs=114.3
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccc
Q 029593 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADD 75 (191)
Q Consensus 1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 75 (191)
|+.++++|+|||||||+|+...+..++..+ .++.|.+.... . .....|.... .....+.....+.
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~-----~~~~g~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 70 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWREV-----LGRYGLQFDEQ-A----MVALNGSPTWRIAQAIIELNQADLDPHA 70 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHHH-----HHHcCCCCCHH-H----HHHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence 677899999999999999999888888873 45566643211 1 1111222211 1111122222222
Q ss_pred hhhhhh---cCCCCCCCCCChhHHHHHHhhccCc-E-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 76 YHGFVH---GRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 76 ~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~g-~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
+..... .........+.|+ .++|..|++.. + |+||++...++..++++++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--------- 140 (188)
T PRK10725 71 LAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH--------- 140 (188)
T ss_pred HHHHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC---------
Confidence 222111 1111234567786 58999998652 3 9999999999999999999999999999998876
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|+++..++++++++|++|++|||+..|.
T Consensus 141 -----~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di 172 (188)
T PRK10725 141 -----HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGI 172 (188)
T ss_pred -----CCCChHHHHHHHHHcCCCHHHeEEEeccHhhH
Confidence 49999999999999999999999999998874
No 8
>PRK11587 putative phosphatase; Provisional
Probab=99.92 E-value=1.6e-24 Score=157.89 Aligned_cols=158 Identities=18% Similarity=0.156 Sum_probs=112.7
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-HHHHHcCCCCCccchhhhhhc
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGADDYHGFVHG 82 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (191)
++|+|+|||||||+|+...+..++.+ .++++|.+...... ...|... ..++.+......+.+...+..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVLN------FIHGKQAITSLRHFMAGASEAEIQAEFTR 70 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHHH------HHcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence 47999999999999999988888887 45667876432111 1112221 122222212222222222211
Q ss_pred -----CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593 83 -----RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (191)
Q Consensus 83 -----~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (191)
........++||+.++|+.|+++|+ ++||++.......++..++ ..++.++++++...
T Consensus 71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------- 136 (218)
T PRK11587 71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------- 136 (218)
T ss_pred HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC-------------
Confidence 1112346889999999999999987 9999988888888888888 45778888877655
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|+++..+++++|++|++|++||||.+|.
T Consensus 137 -~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di 168 (218)
T PRK11587 137 -GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGV 168 (218)
T ss_pred -CCCCcHHHHHHHHHcCCCcccEEEEecchhhh
Confidence 49999999999999999999999999999874
No 9
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.92 E-value=5.2e-25 Score=160.35 Aligned_cols=158 Identities=26% Similarity=0.308 Sum_probs=116.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc----HHHHHHcCCC---CCccch
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST----LAGLRALGYD---IGADDY 76 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~ 76 (191)
++++++|||||||+|+++.+.++|.+ +++++|+....... ....+.. ...+...... ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 47999999999999999999999998 56777876433221 1112211 1111111111 111111
Q ss_pred hhhhh--cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593 77 HGFVH--GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (191)
Q Consensus 77 ~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (191)
..... ........++.||+.++++.|+++|+ +.|++.+..++..++.+|+..+|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 11111 11123457999999999999999877 7777888899999999999999999999998887
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
+||+|+.|..+++++|+.|++|++|+||++
T Consensus 141 ----~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~ 170 (221)
T COG0637 141 ----GKPAPDIYLLAAERLGVDPEECVVVEDSPA 170 (221)
T ss_pred ----CCCCCHHHHHHHHHcCCChHHeEEEecchh
Confidence 499999999999999999999999999986
No 10
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.92 E-value=1.3e-24 Score=158.74 Aligned_cols=167 Identities=26% Similarity=0.297 Sum_probs=112.7
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHhccc-----HHHHHHcCCCCCccchh
Q 029593 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS--ETKASSLRVELFKAYGST-----LAGLRALGYDIGADDYH 77 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 77 (191)
+++|+||+||||+++...+..++....+. ....|.+ ...............+.. .............+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 68999999999999998777666543322 2334443 222222111111122111 11111111111111111
Q ss_pred hhhhcC--CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593 78 GFVHGR--LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (191)
Q Consensus 78 ~~~~~~--~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (191)
...... .....+.++||+.++|+.|+++|+ ++||++...++..++++|+..+|+.++++++.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------- 148 (221)
T TIGR02253 80 AFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV----------- 148 (221)
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC-----------
Confidence 111100 112336899999999999999986 9999999999999999999999999999998876
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593 153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY 187 (191)
Q Consensus 153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~ 187 (191)
.||+|++++.+++++|++|++|++|||++ +|.
T Consensus 149 ---~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di 181 (221)
T TIGR02253 149 ---EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDI 181 (221)
T ss_pred ---CCCCHHHHHHHHHHcCCChhhEEEECCChHHHH
Confidence 49999999999999999999999999998 663
No 11
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.92 E-value=6.3e-25 Score=163.27 Aligned_cols=161 Identities=12% Similarity=0.099 Sum_probs=115.3
Q ss_pred CceEEEEecCCCCCCChH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcC-CCCCcc---chh
Q 029593 4 PFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALG-YDIGAD---DYH 77 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~---~~~ 77 (191)
.+|+|+|||||||+|+.. .+..+|.. +.+++|++...... .....|.... .+..+. .....+ .+.
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~ 93 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRLA 93 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHHH
Confidence 589999999999999964 45567776 55667775432221 1122233222 112111 111111 111
Q ss_pred hhhh---cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593 78 GFVH---GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (191)
Q Consensus 78 ~~~~---~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (191)
.... .........++||+.++|+.|+++|+ |+||++...++..++++++..+|+.++++++...
T Consensus 94 ~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~---------- 163 (260)
T PLN03243 94 IRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR---------- 163 (260)
T ss_pred HHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC----------
Confidence 1111 11112346789999999999999987 9999999999999999999999999999998776
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|++|..+++++|++|++|++||||.+|.
T Consensus 164 ----~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di 195 (260)
T PLN03243 164 ----GKPDPEMFMYAAERLGFIPERCIVFGNSNSSV 195 (260)
T ss_pred ----CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHH
Confidence 49999999999999999999999999999875
No 12
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.92 E-value=3.4e-24 Score=156.20 Aligned_cols=162 Identities=23% Similarity=0.264 Sum_probs=117.8
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-H-HcCCCCC------cc
Q 029593 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-R-ALGYDIG------AD 74 (191)
Q Consensus 3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~------~~ 74 (191)
+++++|+||+||||+|+...+..++.. ..+.+|.+....... ....|...... . ....... .+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEI----RQLIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhcCCHHHHHHHHhccccchhHHHHHH
Confidence 358999999999999999999988886 567777774333332 22222222211 1 1111110 11
Q ss_pred chhhhhhcCCCCC-CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 75 DYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
.+...+....... ...++||+.++|..|+++|+ |+||++...++..++++|+..+|+.+++++....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~--------- 143 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP--------- 143 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence 1111121111111 35799999999999999997 9999999999999999999999999999666555
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|..+..+++.++++|++++||||+.+|-
T Consensus 144 -----~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di 175 (220)
T COG0546 144 -----PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDI 175 (220)
T ss_pred -----CCcCHHHHHHHHHHhCCChhheEEECCCHHHH
Confidence 49999999999999999999999999999884
No 13
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.92 E-value=9e-25 Score=159.66 Aligned_cols=161 Identities=17% Similarity=0.161 Sum_probs=116.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-H----HcCC-CCCccchh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-R----ALGY-DIGADDYH 77 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~-~~~~~~~~ 77 (191)
++++|+||+||||+|+.+.+..++.+ +.+..|.+......+ ....+...... . .... ....+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREEL----PDTLGLRIDQVVDLWYARQPWNGPSRQEVV 76 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHH----HHhhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence 69999999999999999888888876 456667653321211 12222221111 1 1111 11111221
Q ss_pred hhhhcC---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593 78 GFVHGR---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (191)
Q Consensus 78 ~~~~~~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (191)
..+.+. .......++||+.++++.|+++|+ ++||+....++.+++++++..+|+.+++++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------- 146 (222)
T PRK10826 77 QRIIARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY---------- 146 (222)
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC----------
Confidence 111111 112346899999999999999987 9999999999999999999999999999988766
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|.+++.+++++|++|++|++|||+.+|.
T Consensus 147 ----~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di 178 (222)
T PRK10826 147 ----SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGM 178 (222)
T ss_pred ----CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhH
Confidence 59999999999999999999999999999874
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.92 E-value=5.7e-24 Score=163.80 Aligned_cols=163 Identities=13% Similarity=0.136 Sum_probs=117.1
Q ss_pred CCCCceEEEEecCCCCCCChHHH-HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-HHHcC-CCCCcc---
Q 029593 1 MDSPFNCLVFDLDDTLYPSETGI-AAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALG-YDIGAD--- 74 (191)
Q Consensus 1 M~~~~k~iifD~DGTL~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~--- 74 (191)
|...+++|||||||||+|+...+ ..+|.. +.+..|.+...... .....|..... +..+. ......
T Consensus 127 ~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e 197 (381)
T PLN02575 127 MGCGWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELR 197 (381)
T ss_pred ccCCCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHH
Confidence 33478999999999999998754 457776 44666765433221 11223333221 22211 111111
Q ss_pred ch----hhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCC
Q 029593 75 DY----HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (191)
Q Consensus 75 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~ 147 (191)
.+ ...+.... .....++||+.++|+.|+++|+ |+||+....++..++++|+..+|+.++++++...
T Consensus 198 ~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~------ 270 (381)
T PLN02575 198 RMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR------ 270 (381)
T ss_pred HHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC------
Confidence 11 11221111 2336789999999999999987 9999999999999999999999999999998776
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|++|..+++++|+.|++|++|||+..|.
T Consensus 271 --------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DI 302 (381)
T PLN02575 271 --------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTV 302 (381)
T ss_pred --------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHH
Confidence 49999999999999999999999999998763
No 15
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.91 E-value=5.5e-24 Score=155.28 Aligned_cols=160 Identities=17% Similarity=0.179 Sum_probs=114.8
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-HHHHHcCC--CCCccc---hhh
Q 029593 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGY--DIGADD---YHG 78 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~---~~~ 78 (191)
+|+|+||+||||+++.+.+..++.++ .+++|.+....+... . ..+... ..+..+.. ....+. +..
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~-----~~~~g~~~~~~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQA-----VTAAGLSPTPEEVQS--A--WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHH-----HHHcCCCCCHHHHHH--h--hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 58999999999999999888888873 455676543222111 0 122221 11222111 111111 111
Q ss_pred ----hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC--cccceeeecccCCCCCCCCCCC
Q 029593 79 ----FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRP 149 (191)
Q Consensus 79 ----~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~--~~f~~i~~~~~~~~~~~~~~~~ 149 (191)
.+..........++||+.++|..|+++|+ ++||+....++..++.+++. ++|+.++++++...
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~-------- 143 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA-------- 143 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence 22221112346899999999999999887 99999999999999999998 99999999988765
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCC-CCceEEecCccccc
Q 029593 150 DEFPVLLKPSMDAMKLALHVANVD-PRHAVRQSSFLIFY 187 (191)
Q Consensus 150 ~~~~~~~kp~~~~~~~~~~~~~~~-p~~~i~iGDs~~~~ 187 (191)
.||+|.++..+++++++. |++|++|||+++|.
T Consensus 144 ------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di 176 (220)
T TIGR03351 144 ------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDL 176 (220)
T ss_pred ------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHH
Confidence 499999999999999997 79999999999873
No 16
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.91 E-value=1e-23 Score=153.10 Aligned_cols=157 Identities=23% Similarity=0.281 Sum_probs=111.9
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-H----HHHcCCCCCcc---chhhh
Q 029593 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-G----LRALGYDIGAD---DYHGF 79 (191)
Q Consensus 8 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~---~~~~~ 79 (191)
|+||+||||+|+...+..++.. ..++.|.+....... ....+.... . +...+.+...+ ++.+.
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARV----IGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999999888777776 445666643222221 111222211 1 11112122211 11221
Q ss_pred hhcC---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593 80 VHGR---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (191)
Q Consensus 80 ~~~~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (191)
+... .......++||+.++|+.|+++|+ |+||++...++.+++++++..+|+.++++++...
T Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------ 139 (213)
T TIGR01449 72 FDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ------------ 139 (213)
T ss_pred HHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC------------
Confidence 1111 112246889999999999999886 9999999999999999999999999999887765
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|+++..++++++++|++|++|||+.+|.
T Consensus 140 --~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~ 171 (213)
T TIGR01449 140 --RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDI 171 (213)
T ss_pred --CCCChHHHHHHHHHcCCChhHeEEeCCCHHHH
Confidence 49999999999999999999999999999885
No 17
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.91 E-value=6.7e-24 Score=150.81 Aligned_cols=157 Identities=21% Similarity=0.249 Sum_probs=110.5
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh-
Q 029593 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG- 78 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 78 (191)
+++|+||+||||+|+...+..++.++ .+.+|.+... ... ....+.... .+...+.....+.+..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~-----~~~~g~~~~~--~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHL-----ADKYGIEFDK--QYN---TSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHH-----HHHcCCCCCH--HHH---HHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 58999999999999998887788773 4556665321 110 111121111 1111111222222211
Q ss_pred ------hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCC
Q 029593 79 ------FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (191)
Q Consensus 79 ------~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~ 149 (191)
.+...+......++||+.++|+.|+++|+ ++||+ ..++.+++++++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 12221112347899999999999999987 77776 668889999999999999999887766
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|+++..++++++++|+++++|||+..|.
T Consensus 141 ------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di 172 (185)
T TIGR02009 141 ------GKPHPETFLLAAELLGVSPNECVVFEDALAGV 172 (185)
T ss_pred ------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhH
Confidence 49999999999999999999999999999874
No 18
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.91 E-value=1.3e-23 Score=156.32 Aligned_cols=86 Identities=12% Similarity=0.011 Sum_probs=78.7
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
...++||+.++|+.|+++|+ |+||++...++.+++++++..+| +.++++++... +||+|+++
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~--------------~KP~p~~~ 162 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA--------------GRPAPWMA 162 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC--------------CCCCHHHH
Confidence 46899999999999999987 99999999999999999999985 88999888766 49999999
Q ss_pred HHHHHHcCCC-CCceEEecCccccc
Q 029593 164 KLALHVANVD-PRHAVRQSSFLIFY 187 (191)
Q Consensus 164 ~~~~~~~~~~-p~~~i~iGDs~~~~ 187 (191)
..+++++++. |++|++||||++|.
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di 187 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDI 187 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHH
Confidence 9999999995 99999999999874
No 19
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.90 E-value=2.3e-23 Score=152.15 Aligned_cols=159 Identities=17% Similarity=0.164 Sum_probs=113.1
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG 78 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 78 (191)
++++|+||+||||+|+...+..++.+ ..+.+|.+... .+....+ .+.... .....+.....+.+..
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~-~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSL-EEVFKRF---KGVKLYEIIDIISKEHGVTLAKAELEP 73 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCH-HHHHHHh---cCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 58999999999999999877777776 44556765322 1111111 111111 1122233333344443
Q ss_pred hhhcCC---CCCCCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccc-eeeecccCCCCCCCCCCCCCCC
Q 029593 79 FVHGRL---PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFP 153 (191)
Q Consensus 79 ~~~~~~---~~~~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~ 153 (191)
.+.... ......++||+.++|+.|+ ..+ |+||++...+...++++++..+|+ .++++++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~gv~~~L~~L~-~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------ 140 (221)
T PRK10563 74 VYRAEVARLFDSELEPIAGANALLESIT-VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------ 140 (221)
T ss_pred HHHHHHHHHHHccCCcCCCHHHHHHHcC-CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence 332211 1234788999999999995 444 999999999999999999999996 5777776665
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+||+|++|..++++++++|++|++|||++.|
T Consensus 141 --~KP~p~~~~~a~~~~~~~p~~~l~igDs~~d 171 (221)
T PRK10563 141 --WKPDPALMFHAAEAMNVNVENCILVDDSSAG 171 (221)
T ss_pred --CCCChHHHHHHHHHcCCCHHHeEEEeCcHhh
Confidence 4999999999999999999999999999987
No 20
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.90 E-value=2.7e-23 Score=149.28 Aligned_cols=86 Identities=21% Similarity=0.308 Sum_probs=80.0
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
...++|++.++|+.|+++|+ ++||++...++..++++|+..+|+.++++++++. .||+|.+|+
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~--------------~KP~~~~~~ 155 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA--------------YKPAPQVYQ 155 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC--------------CCCCHHHHH
Confidence 36789999999999999986 9999999999999999999999999999998876 499999999
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.+++++|++|++|++|||+++|.
T Consensus 156 ~~~~~~~~~p~~~~~vgD~~~Di 178 (198)
T TIGR01428 156 LALEALGVPPDEVLFVASNPWDL 178 (198)
T ss_pred HHHHHhCCChhhEEEEeCCHHHH
Confidence 99999999999999999999764
No 21
>PLN02940 riboflavin kinase
Probab=99.90 E-value=1.5e-23 Score=163.72 Aligned_cols=160 Identities=20% Similarity=0.222 Sum_probs=116.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG 78 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 78 (191)
.+++|+||+||||+|+...+..++.. +.+.+|.+..... .....|.... .+...+.+...+++..
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 48999999999999999988888887 4456676532221 1122222111 1122232333333322
Q ss_pred hhhcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHh-hcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593 79 FVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLK-RLEIADCFDQIICFETMNPNLSKATRPDEF 152 (191)
Q Consensus 79 ~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~-~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (191)
.+.... ......++||+.++|+.|+++|+ |+||+....+...++ .+++..+|+.++++++...
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~----------- 148 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK----------- 148 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence 222111 12346789999999999999987 999999999888887 7899999999999998776
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|+++..++++++++|++|++|||+..|-
T Consensus 149 ---~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di 180 (382)
T PLN02940 149 ---GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGV 180 (382)
T ss_pred ---CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHH
Confidence 49999999999999999999999999998763
No 22
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.90 E-value=1.3e-23 Score=149.34 Aligned_cols=155 Identities=20% Similarity=0.208 Sum_probs=107.5
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-H----HHHHcCCCCCccchhh---
Q 029593 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-A----GLRALGYDIGADDYHG--- 78 (191)
Q Consensus 7 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~--- 78 (191)
+|+||+||||+|+...+..++.+ +.+.+|.+...... ....+... . .+...+...+.+....
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEFN-----ESLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHHH-----HHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 58999999999999988888877 44566665322111 11111111 1 1112222222222211
Q ss_pred ----hhhcCCC-CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 79 ----FVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 79 ----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
.+..... .....++||+.++|+.|+++|+ ++||+.. ....++++++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~--------- 139 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK--------- 139 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence 1111110 1235789999999999999987 7887643 4678999999999999999888776
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+||+|++|+.++++++++|++|++|||+.+|.
T Consensus 140 -----~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di 171 (185)
T TIGR01990 140 -----GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGI 171 (185)
T ss_pred -----CCCChHHHHHHHHHcCCCHHHeEEEecCHHHH
Confidence 49999999999999999999999999999874
No 23
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.90 E-value=4.6e-23 Score=148.89 Aligned_cols=156 Identities=21% Similarity=0.232 Sum_probs=111.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCc-cchhhhhhcCCC
Q 029593 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGA-DDYHGFVHGRLP 85 (191)
Q Consensus 8 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ 85 (191)
|+|||||||+|+.+.+..++.+++.+ ..|.+...... .....+.... .+..++.+... +.+...... .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYRE----VVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHH----hcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 68999999999999888888874432 23443211111 1122222221 22222221111 111111111 1
Q ss_pred CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 86 ~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
...+.++||+.++|+.|+++|+ ++||++...++..++++|+..+|+.++++++.+. +||+|.+
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~ 136 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------PKPAPDI 136 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC--------------CCCChHH
Confidence 2347899999999999999986 9999999999999999999999999999887655 5999999
Q ss_pred HHHHHHHcCCCCCceEEecCccccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+..++++++++|++|++|||+++|.
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di 161 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDL 161 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHH
Confidence 9999999999999999999999875
No 24
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.90 E-value=6e-23 Score=153.90 Aligned_cols=86 Identities=12% Similarity=0.035 Sum_probs=77.0
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
...++||+.++|+.|+++|+ |+||+....+..+++.+++..+| +.++++++... .||+|.++
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~--------------~KP~p~~~ 164 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPA--------------GRPYPWMA 164 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCC--------------CCCChHHH
Confidence 46889999999999999987 99999999999999999888874 88888887766 49999999
Q ss_pred HHHHHHcCCC-CCceEEecCccccc
Q 029593 164 KLALHVANVD-PRHAVRQSSFLIFY 187 (191)
Q Consensus 164 ~~~~~~~~~~-p~~~i~iGDs~~~~ 187 (191)
..+++++|+. |++|++|||+++|.
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di 189 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGI 189 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHH
Confidence 9999999996 69999999999874
No 25
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.89 E-value=1.1e-22 Score=148.91 Aligned_cols=161 Identities=20% Similarity=0.221 Sum_probs=115.2
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-----HHHcCCCCCccchh
Q 029593 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-----LRALGYDIGADDYH 77 (191)
Q Consensus 3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 77 (191)
+++++|+||+||||+++...+..++.. ..+..|.+........ ...+..... +...+.....+...
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEELLE 74 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHHHHH
Confidence 479999999999999998877777776 4455666532222221 111211111 11111122222221
Q ss_pred -------hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCC
Q 029593 78 -------GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (191)
Q Consensus 78 -------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~ 147 (191)
..+.... .....+.||+.++++.|+++|+ ++||+....++.+++++++..+|+.+++++..+.
T Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 147 (226)
T PRK13222 75 KLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN------ 147 (226)
T ss_pred HHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC------
Confidence 1122211 1236799999999999999886 9999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|.+++.++++++++|++|++|||+.+|.
T Consensus 148 --------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di 179 (226)
T PRK13222 148 --------KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDI 179 (226)
T ss_pred --------CCcChHHHHHHHHHcCCChhheEEECCCHHHH
Confidence 49999999999999999999999999999875
No 26
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.89 E-value=4.9e-23 Score=154.48 Aligned_cols=161 Identities=22% Similarity=0.263 Sum_probs=115.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-HHc-C-----CCCCc---
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RAL-G-----YDIGA--- 73 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~--- 73 (191)
.+|+|+|||||||+|+.+.+..++.. +.++.|.+........ ...+.....+ ..+ . ...+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAVR----HWVGNGAPVLVRRALAGSIDHDGVDDELA 82 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhChhHHHHHHHHhcccccccCCCHHHH
Confidence 48999999999999999988888886 5566777643222211 1122221111 110 0 01111
Q ss_pred cchhhhhhcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC
Q 029593 74 DDYHGFVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR 148 (191)
Q Consensus 74 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~ 148 (191)
+.+...+.+.. ......++||+.++|+.|+++|+ ++||++...++..++.+++..+|+.+++++....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------- 155 (272)
T PRK13223 83 EQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------- 155 (272)
T ss_pred HHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC-------
Confidence 11222222111 12235789999999999999886 9999999999999999999999999999887665
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 149 PDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 149 ~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|.+++.+++++|++|++|++|||+.+|.
T Consensus 156 -------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di 187 (272)
T PRK13223 156 -------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDV 187 (272)
T ss_pred -------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHH
Confidence 49999999999999999999999999999884
No 27
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.89 E-value=8.3e-23 Score=146.68 Aligned_cols=83 Identities=20% Similarity=0.199 Sum_probs=75.0
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
.+.++..++|+.|+++|+ |+||++...++..++++|+..+|+.++++++... ||+|..+..+
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---------------KP~p~~~~~~ 170 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP---------------KPNPEPLILA 170 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC---------------CcCHHHHHHH
Confidence 344556999999999887 9999999999999999999999999999887653 9999999999
Q ss_pred HHHcCCCCCceEEecCccccc
Q 029593 167 LHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++.++++|++|++|||+++|.
T Consensus 171 ~~~~~~~~~~~i~vGD~~~Di 191 (197)
T TIGR01548 171 AKALGVEACHAAMVGDTVDDI 191 (197)
T ss_pred HHHhCcCcccEEEEeCCHHHH
Confidence 999999999999999999874
No 28
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.89 E-value=1.7e-22 Score=145.71 Aligned_cols=160 Identities=19% Similarity=0.229 Sum_probs=109.1
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHH--HHHHHHHHHHH-------h----cccH-----HHH---
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETK--ASSLRVELFKA-------Y----GSTL-----AGL--- 64 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~-------~----~~~~-----~~~--- 64 (191)
|+|+||+||||+|+...+..++.+ +.+..|.+... ........+.. + +... ..+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 689999999999999888878877 44566775322 11111111111 0 1111 111
Q ss_pred -HHcCCCCCccchhhh---hhcC-CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeec
Q 029593 65 -RALGYDIGADDYHGF---VHGR-LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF 136 (191)
Q Consensus 65 -~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~ 136 (191)
...+. ...+.+... +... .......++||+.++|..|+++|+ |+||++.. ++..++.+++..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 11111 112222221 1111 112335789999999999999886 99998765 57789999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-cc
Q 029593 137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IF 186 (191)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~ 186 (191)
++.+. .||+|.++..+++++|++|++|++|||++ +|
T Consensus 154 ~~~~~--------------~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~D 190 (203)
T TIGR02252 154 YEVGA--------------EKPDPKIFQEALERAGISPEEALHIGDSLRND 190 (203)
T ss_pred cccCC--------------CCCCHHHHHHHHHHcCCChhHEEEECCCchHH
Confidence 88776 49999999999999999999999999997 66
No 29
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.89 E-value=4e-22 Score=145.72 Aligned_cols=162 Identities=22% Similarity=0.250 Sum_probs=112.3
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHH--HHH---HHHHHHh--cc-cHH---------HHHHc
Q 029593 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS--SLR---VELFKAY--GS-TLA---------GLRAL 67 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~---~~~~~~~--~~-~~~---------~~~~~ 67 (191)
+|+|+||+||||+|+...+..++.+. .+..|.+..... ... ...+..+ +. ... ....+
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLL-----FEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHH-----HHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 58999999999999998877777763 345565432111 100 0111111 10 000 11122
Q ss_pred CCCCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC
Q 029593 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS 144 (191)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~ 144 (191)
+.+...+.+...+.... .....++||+.++|+.|+++ + ++||+....+...++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI--- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC---
Confidence 22221112333232211 12357899999999999988 5 9999999999999999999999999999988776
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHc-CCCCCceEEecCcc-ccc
Q 029593 145 KATRPDEFPVLLKPSMDAMKLALHVA-NVDPRHAVRQSSFL-IFY 187 (191)
Q Consensus 145 ~~~~~~~~~~~~kp~~~~~~~~~~~~-~~~p~~~i~iGDs~-~~~ 187 (191)
.||+|.++..+++++ +++|++|++|||++ +|.
T Consensus 151 -----------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di 184 (224)
T TIGR02254 151 -----------QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADI 184 (224)
T ss_pred -----------CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHH
Confidence 499999999999999 99999999999997 564
No 30
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.88 E-value=4.7e-22 Score=148.82 Aligned_cols=156 Identities=13% Similarity=0.162 Sum_probs=110.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-HHHHHcCCC-CCccc----hh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYD-IGADD----YH 77 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~----~~ 77 (191)
.+++++|||||||+|+.+.+..++.+ ..+++|........ .....+... ..+..++.+ ...++ +.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 58999999999999999988888887 44666764222211 111122111 122222211 01111 11
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (191)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (191)
..+... .....++||+.++|+.|+++|+ |+||+....+...++++|+..+|+.+++++..
T Consensus 132 ~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~--------------- 194 (273)
T PRK13225 132 RQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI--------------- 194 (273)
T ss_pred HHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence 222221 2346889999999999999987 99999999999999999999999998876653
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++++..+..++++++++|++|++|||+.+|.
T Consensus 195 --~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di 225 (273)
T PRK13225 195 --LSKRRALSQLVAREGWQPAAVMYVGDETRDV 225 (273)
T ss_pred --CCCHHHHHHHHHHhCcChhHEEEECCCHHHH
Confidence 3456899999999999999999999999874
No 31
>PRK09449 dUMP phosphatase; Provisional
Probab=99.87 E-value=1.8e-21 Score=142.35 Aligned_cols=83 Identities=23% Similarity=0.252 Sum_probs=75.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
..++||+.++|+.|++ |+ ++||+....++..++++|+..+|+.++++++.+. .||+|++|..
T Consensus 94 ~~~~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~--------------~KP~p~~~~~ 158 (224)
T PRK09449 94 CTPLPGAVELLNALRG-KVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV--------------AKPDVAIFDY 158 (224)
T ss_pred CccCccHHHHHHHHHh-CCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC--------------CCCCHHHHHH
Confidence 6789999999999994 55 9999999999999999999999999999998876 4999999999
Q ss_pred HHHHcCCC-CCceEEecCcc-cc
Q 029593 166 ALHVANVD-PRHAVRQSSFL-IF 186 (191)
Q Consensus 166 ~~~~~~~~-p~~~i~iGDs~-~~ 186 (191)
+++++|+. +++|++|||++ +|
T Consensus 159 ~~~~~~~~~~~~~~~vgD~~~~D 181 (224)
T PRK09449 159 ALEQMGNPDRSRVLMVGDNLHSD 181 (224)
T ss_pred HHHHcCCCCcccEEEEcCCcHHH
Confidence 99999985 58999999997 46
No 32
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.87 E-value=8.5e-23 Score=143.40 Aligned_cols=159 Identities=28% Similarity=0.410 Sum_probs=110.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-HHHcCCCCCccchhhhhhcCCCC
Q 029593 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALGYDIGADDYHGFVHGRLPY 86 (191)
Q Consensus 8 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 86 (191)
|+||+||||+++...+..++... +.+.++.+.. .................. +...+ .....+.+.+.+....
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRL----ALEEFGLEIS-AEELRELFGKSYEEALERLLERFG--IDPEEIQELFREYNLE 73 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHH----HHHHTTHHHH-HHHHHHHTTSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHHH----HHHHhCCCCC-HHHHHHHhCCCHHHHHHHhhhccc--hhHHHHHHHhhhhhhh
Confidence 79999999999988666666652 3444454421 222111111111111110 01111 0122233333222112
Q ss_pred CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
....++|++.++|..|+++|+ ++||++...++..++++|+..+|+.++++++.+. .||++.+|
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~--------------~Kp~~~~~ 139 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS--------------RKPDPDAY 139 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS--------------STTSHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh--------------hhhHHHHH
Confidence 347899999999999998886 9999999999999999999999999999998877 49999999
Q ss_pred HHHHHHcCCCCCceEEecCccccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.++++++++|++|++|||++.|.
T Consensus 140 ~~~~~~~~~~p~~~~~vgD~~~d~ 163 (176)
T PF13419_consen 140 RRALEKLGIPPEEILFVGDSPSDV 163 (176)
T ss_dssp HHHHHHHTSSGGGEEEEESSHHHH
T ss_pred HHHHHHcCCCcceEEEEeCCHHHH
Confidence 999999999999999999998763
No 33
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.87 E-value=1e-21 Score=138.47 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=73.5
Q ss_pred CCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
.+.++||+.++|+. + |+||++...++..++++++..+|+.++++++++. .||+|+.|..+
T Consensus 88 ~~~~~~g~~~~L~~-----~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~--------------~KP~p~~f~~~ 148 (175)
T TIGR01493 88 NLPPWPDSAAALAR-----VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA--------------YKPDPVVYELV 148 (175)
T ss_pred cCCCCCchHHHHHH-----HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC--------------CCCCHHHHHHH
Confidence 36799999999983 5 9999999999999999999999999999998776 49999999999
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
++++|++|++|++|||+..|
T Consensus 149 ~~~~~~~p~~~l~vgD~~~D 168 (175)
T TIGR01493 149 FDTVGLPPDRVLMVAAHQWD 168 (175)
T ss_pred HHHHCCCHHHeEeEecChhh
Confidence 99999999999999999866
No 34
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.87 E-value=9e-22 Score=148.55 Aligned_cols=163 Identities=19% Similarity=0.240 Sum_probs=105.1
Q ss_pred CceEEEEecCCCCCCCh-HHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHhcccHHH----HHHcCCC-------
Q 029593 4 PFNCLVFDLDDTLYPSE-TGIAAAVKRNIEGFLIEKCGFSET-KASSLRVELFKAYGSTLAG----LRALGYD------- 70 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~-~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~------- 70 (191)
++++|+|||||||+|+. ..+..+|.++ ++.+|.+.. ........... .+..... +...+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~~-----l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 112 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFNDA-----FKEFGLRPVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTIEKA 112 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHHH-----HHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHHHHHcCCCccccccC
Confidence 68999999999999999 8888888874 455676311 00110000111 2211111 1010110
Q ss_pred -CCccc-------hh----hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc---cce
Q 029593 71 -IGADD-------YH----GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC---FDQ 132 (191)
Q Consensus 71 -~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~---f~~ 132 (191)
...+. +. ..+........+.++||+.++|+.|+++|+ |+||++...+..+++.++...+ |+.
T Consensus 113 ~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~ 192 (286)
T PLN02779 113 PKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDV 192 (286)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEE
Confidence 01111 11 111111111235899999999999999987 9999999998888887643333 343
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 133 i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+ ++++.+. .||+|+++..+++++|++|++|++|||+++|.
T Consensus 193 v-~~~~~~~--------------~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di 232 (286)
T PLN02779 193 F-AGDDVPK--------------KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGL 232 (286)
T ss_pred E-eccccCC--------------CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhH
Confidence 4 6666554 59999999999999999999999999999875
No 35
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.86 E-value=2.3e-21 Score=155.40 Aligned_cols=162 Identities=14% Similarity=0.158 Sum_probs=110.1
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccHHH-HHHcCCCCC---ccchhh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEK-CGFSETKASSLRVELFKAYGSTLAG-LRALGYDIG---ADDYHG 78 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 78 (191)
++++|+|||||||+|+.+.+..+|.+++.++.... .+.... ... .....|..... ...+..... .+.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~ 314 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-IDK----YREIMGVPLPKVWEALLPDHSLEIREQTDA 314 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-HHH----HHHHcCCChHHHHHHHhhhcchhHHHHHHH
Confidence 57999999999999999999999988765542111 111110 111 11222222111 111111111 111222
Q ss_pred hh----hcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593 79 FV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (191)
Q Consensus 79 ~~----~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (191)
.+ .........+++||+.++|+.|+++|+ |+||+....++..++.+++..+|+.++++++...
T Consensus 315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~---------- 384 (459)
T PRK06698 315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS---------- 384 (459)
T ss_pred HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC----------
Confidence 22 111112346889999999999999887 9999999999999999999999999999887643
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
||+|+.+..++++++ |++|++|||+++|.
T Consensus 385 -----~~kP~~~~~al~~l~--~~~~v~VGDs~~Di 413 (459)
T PRK06698 385 -----LNKSDLVKSILNKYD--IKEAAVVGDRLSDI 413 (459)
T ss_pred -----CCCcHHHHHHHHhcC--cceEEEEeCCHHHH
Confidence 677889999998864 79999999999875
No 36
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.86 E-value=5.6e-21 Score=131.98 Aligned_cols=144 Identities=20% Similarity=0.210 Sum_probs=102.5
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCCCC
Q 029593 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY 86 (191)
Q Consensus 7 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (191)
+|+||+||||+|+.+.+..++...+ ++.+.+.... ....+.....+..... ..+++.. + .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~g~~~~~~~~~~~--~~~~~~~-~-----~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETL-----EEFGEDFQAL-------KALRGLAEELLYRIAT--SFEELLG-Y-----D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHH-----HHhcccHHHH-------HHHHccChHHHHHHHH--HHHHHhC-c-----c
Confidence 4899999999999988888888744 3445432211 1111111111111000 0111111 1 1
Q ss_pred CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
......||+.++++.|+++|+ ++||++...+...++.+ +..+|+.++++++.+ . ||+|.++
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~--------------Kp~~~~~ 124 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A--------------KPEPEIF 124 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C--------------CcCHHHH
Confidence 234567999999999998886 99999999999999988 888999999887765 3 9999999
Q ss_pred HHHHHHcCCCCCceEEecCccccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
..++++++++| +|++|||+..|.
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di 147 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDI 147 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHH
Confidence 99999999999 999999998774
No 37
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.86 E-value=2.8e-21 Score=140.13 Aligned_cols=86 Identities=19% Similarity=0.135 Sum_probs=72.6
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHH--HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNH--AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
...++|++.++|+.|+++|+ ++||+.... ....+...++..+|+.++++++.+. .||+|.+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~KP~p~~ 157 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------RKPDPRI 157 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC--------------CCCCHHH
Confidence 46789999999999999987 899986543 3334455678889999999887776 4999999
Q ss_pred HHHHHHHcCCCCCceEEecCccccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
|..+++++|++|++|++|||+..|.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di 182 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNL 182 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHH
Confidence 9999999999999999999998763
No 38
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.85 E-value=1.2e-21 Score=138.95 Aligned_cols=83 Identities=28% Similarity=0.362 Sum_probs=75.0
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
..+.||+.++|+.|+++|+ ++||+.... .....++|+..+|+.++++++.+. +||+|..++.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~~~~ 148 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR--------------GKPDPDIYLL 148 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC--------------CCCCHHHHHH
Confidence 5889999999999999885 999999887 666666999999999999887766 5999999999
Q ss_pred HHHHcCCCCCceEEecCcccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~ 186 (191)
++++++++|++|++|||++.|
T Consensus 149 ~~~~~~~~~~~~~~vgD~~~d 169 (183)
T TIGR01509 149 ALKKLGLKPEECLFVDDSPAG 169 (183)
T ss_pred HHHHcCCCcceEEEEcCCHHH
Confidence 999999999999999999876
No 39
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.85 E-value=1.3e-20 Score=138.25 Aligned_cols=85 Identities=27% Similarity=0.371 Sum_probs=78.6
Q ss_pred CCCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 88 LIKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
.+++.|++.+.|..++++ .+ ++||+....+...++++|+.++||.++.+++.+. .||+|.+|+.
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~--------------~KP~~~~f~~ 162 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV--------------AKPDPEIFEY 162 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc--------------CCCCcHHHHH
Confidence 378999999999999988 23 9999999999999999999999999999999987 4999999999
Q ss_pred HHHHcCCCCCceEEecCcccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+++++|++|++|++|||++..
T Consensus 163 ~~~~~g~~p~~~l~VgD~~~~ 183 (229)
T COG1011 163 ALEKLGVPPEEALFVGDSLEN 183 (229)
T ss_pred HHHHcCCCcceEEEECCChhh
Confidence 999999999999999999753
No 40
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.85 E-value=4.7e-20 Score=136.02 Aligned_cols=163 Identities=17% Similarity=0.123 Sum_probs=103.8
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHH-----------Hhccc-HHHHHHcC
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF---SETKASSLRVELFK-----------AYGST-LAGLRALG 68 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~ 68 (191)
++|+|+||+||||+|+.+.+..++.+++...-...-+. .......+...+.. ..+.. ...+...+
T Consensus 9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 88 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDAG 88 (238)
T ss_pred CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHcC
Confidence 57999999999999999988887776553321000011 11111111110000 00000 11122223
Q ss_pred CCCCcc-----chhhhhhcCCCCCCCCCChhHHHHHHhhccCc-E-EEecCChHHHHHHHhhcCCCcccceeeecccCCC
Q 029593 69 YDIGAD-----DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141 (191)
Q Consensus 69 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~ 141 (191)
.+.... .....+... ...+.++||+.++|+.|++.. + ++||++.. ++.+|+..+|+.++++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~ 161 (238)
T PRK10748 89 LSAEEASAGADAAMINFAKW--RSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR 161 (238)
T ss_pred CCHHHHHHHHHHHHHHHHHH--hhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCc
Confidence 221111 001111111 133689999999999998762 2 99998875 478899999999999988776
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY 187 (191)
Q Consensus 142 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~ 187 (191)
.||+|.+|..+++++|++|++|+||||++ .|.
T Consensus 162 --------------~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di 194 (238)
T PRK10748 162 --------------SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDV 194 (238)
T ss_pred --------------CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHH
Confidence 49999999999999999999999999995 663
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.84 E-value=6.1e-20 Score=131.99 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=74.2
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh-cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++||+.++++.|+++|+ ++||++.......+.. .++..+|+.++++++.+. .||+|++|.
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~KP~p~~~~ 148 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM--------------RKPEARIYQ 148 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC--------------CCCCHHHHH
Confidence 4689999999999999986 9999988776665544 478889999999998887 499999999
Q ss_pred HHHHHcCCCCCceEEecCcccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+++++|++|++|++|||+..|
T Consensus 149 ~~~~~~~~~p~~~l~vgD~~~d 170 (199)
T PRK09456 149 HVLQAEGFSAADAVFFDDNADN 170 (199)
T ss_pred HHHHHcCCChhHeEEeCCCHHH
Confidence 9999999999999999999876
No 42
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.83 E-value=7.2e-20 Score=133.49 Aligned_cols=163 Identities=13% Similarity=0.115 Sum_probs=100.9
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH----HHcCCCCCccchhh
Q 029593 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL----RALGYDIGADDYHG 78 (191)
Q Consensus 3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 78 (191)
+++++++|||||||++++. +.. +.+.+|...... ....+...........+ ..+ .....+.+..
T Consensus 12 ~~~k~iiFD~DGTL~~~~~-----~~~-----l~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (219)
T TIGR00338 12 RSKKLVVFDMDSTLINAET-----IDE-----IAKIAGVEEEVS-EITERAMRGELDFKASLRERVALL-KGLPVELLKE 79 (219)
T ss_pred ccCCEEEEeCcccCCCchH-----HHH-----HHHHhCCHHHHH-HHHHHHHcCCCCHHHHHHHHHHHh-CCCCHHHHHH
Confidence 4689999999999999853 222 334455542211 11111111100001111 111 1222222222
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (191)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (191)
... ..++.||+.++++.|+++|+ ++||+....++.+++.+++..+|+..+..++.. +++.+ ......
T Consensus 80 ~~~------~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~---~~~~~-~~~~~~ 149 (219)
T TIGR00338 80 VRE------NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK---LTGLV-EGPIVD 149 (219)
T ss_pred HHh------cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE---EEEEe-cCcccC
Confidence 222 25789999999999999887 999999999999999999988876533222100 00000 001122
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++|++.+++.++++++++|++|++||||.+|.
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di 181 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDL 181 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHH
Confidence 47789999999999999999999999999985
No 43
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.83 E-value=2.9e-20 Score=160.66 Aligned_cols=160 Identities=18% Similarity=0.223 Sum_probs=115.0
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-H----HcCC-CCCccc--
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-R----ALGY-DIGADD-- 75 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~-~~~~~~-- 75 (191)
++++|+|||||||+|+...+..++.+ +.++.|++..... +....+...... . ..+. ....+.
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~ 143 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDAAK 143 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence 68999999999999999988888887 4455676532211 112223222111 1 1111 112222
Q ss_pred --hhhhhhcCC-CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC-cccceeeecccCCCCCCCCCC
Q 029593 76 --YHGFVHGRL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA-DCFDQIICFETMNPNLSKATR 148 (191)
Q Consensus 76 --~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~~~~~~ 148 (191)
+...+.... ......++||+.++|+.|+++|+ |+||+....++..++++++. .+|+.++++++...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------- 216 (1057)
T PLN02919 144 KRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------- 216 (1057)
T ss_pred HHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc-------
Confidence 111221111 11123579999999999999987 99999999999999999996 78999999998876
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 149 PDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 149 ~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|++|..+++++++.|++|++|||++.|.
T Consensus 217 -------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di 248 (1057)
T PLN02919 217 -------LKPAPDIFLAAAKILGVPTSECVVIEDALAGV 248 (1057)
T ss_pred -------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHH
Confidence 49999999999999999999999999998773
No 44
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.79 E-value=4.6e-19 Score=127.24 Aligned_cols=149 Identities=7% Similarity=0.004 Sum_probs=90.9
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCC-CccchhhhhhcC
Q 029593 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDI-GADDYHGFVHGR 83 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 83 (191)
+|+|+|||||||+|+.. ++.+ +.++.|.+....... ......... ...++.+. ..+++...+...
T Consensus 2 ~k~viFDlDGTLiD~~~----~~~~-----~~~~~g~~~~~~~~~---~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 67 (197)
T PHA02597 2 KPTILTDVDGVLLSWQS----GLPY-----FAQKYNIPTDHILKM---IQDERFRDP--GELFGCDQELAKKLIEKYNNS 67 (197)
T ss_pred CcEEEEecCCceEchhh----ccHH-----HHHhcCCCHHHHHHH---HhHhhhcCH--HHHhcccHHHHHHHhhhhhHH
Confidence 69999999999999543 3333 446677764222111 111100000 01111000 011112212111
Q ss_pred CCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCc----ccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593 84 LPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIAD----CFDQIICFETMNPNLSKATRPDEFPVLLK 157 (191)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~----~f~~i~~~~~~~~~~~~~~~~~~~~~~~k 157 (191)
.......++||+.++|+.|++.+. ++||++.......++.+++.. +|+.+++++.. |
T Consensus 68 ~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-----------------~ 130 (197)
T PHA02597 68 DFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-----------------E 130 (197)
T ss_pred HHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-----------------c
Confidence 112336789999999999988654 778877666665667777765 45566666542 6
Q ss_pred CCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 158 PSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
|+|+++..+++++| |+++++|||+.+|
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~vgDs~~d 157 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCFVDDLAHN 157 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEEeCCCHHH
Confidence 77899999999999 8999999999987
No 45
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.79 E-value=2.5e-18 Score=123.69 Aligned_cols=95 Identities=11% Similarity=0.024 Sum_probs=73.6
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
..++||+.++++.|+++|+ |+||+....++.+++.+|+..+|+..+..+..+.. .+. ......+++++..++.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--~p~--~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--QPD--GIVRVTFDNKGEAVER 154 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--ecc--eeeEEccccHHHHHHH
Confidence 5799999999999999987 99999999999999999998888776655433321 000 0000113455678999
Q ss_pred HHHHcCCCCCceEEecCccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++++++++|++|++||||.+|.
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHH
Confidence 9999999999999999999885
No 46
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.77 E-value=2e-18 Score=124.04 Aligned_cols=164 Identities=16% Similarity=0.135 Sum_probs=118.7
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhc
Q 029593 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (191)
Q Consensus 3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (191)
..+.+++||+||||++++.....+++. ++.++|.......................+.......+.+++....++
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~ 82 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEE 82 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHH
Confidence 368899999999999999988888887 566777644333222111111111111122233455666776665544
Q ss_pred CCC--CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcC-CCcccceeee--cccCCCCCCCCCCCCCCCC
Q 029593 83 RLP--YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE-IADCFDQIIC--FETMNPNLSKATRPDEFPV 154 (191)
Q Consensus 83 ~~~--~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~-l~~~f~~i~~--~~~~~~~~~~~~~~~~~~~ 154 (191)
... .....+.||+.+++..|+.+|+ ++|++++...+.+.++++ +...|+.++. ..++..
T Consensus 83 ~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~------------- 149 (222)
T KOG2914|consen 83 ILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN------------- 149 (222)
T ss_pred HHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC-------------
Confidence 321 2346788999999999999998 999999999999988886 7777888776 444444
Q ss_pred CCCCCHHHHHHHHHHcCCCC-CceEEecCccc
Q 029593 155 LLKPSMDAMKLALHVANVDP-RHAVRQSSFLI 185 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p-~~~i~iGDs~~ 185 (191)
+||+|++|..+++.+|..| ++|++++|+++
T Consensus 150 -gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~ 180 (222)
T KOG2914|consen 150 -GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPV 180 (222)
T ss_pred -CCCCchHHHHHHHhcCCCCccceEEECCCHH
Confidence 5999999999999999998 99999999975
No 47
>PLN02954 phosphoserine phosphatase
Probab=99.76 E-value=1.1e-17 Score=122.39 Aligned_cols=165 Identities=16% Similarity=0.150 Sum_probs=96.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHH-cC-CCCCccchhhhhh
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA-LG-YDIGADDYHGFVH 81 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 81 (191)
.+|+|+|||||||++++.. .. +.+.+|...... +....+....-.....+.. +. .....+.+...+.
T Consensus 11 ~~k~viFDfDGTL~~~~~~-----~~-----~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEGI-----DE-----LAEFCGAGEAVA-EWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLE 79 (224)
T ss_pred cCCEEEEeCCCcccchHHH-----HH-----HHHHcCChHHHH-HHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5799999999999998542 22 445566542221 1111111110111111111 10 0112223333333
Q ss_pred cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC--cccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593 82 GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVLL 156 (191)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (191)
. ....++||+.++++.|+++|+ |+|++....++.+++.+|+. .+|+..+..+..+. ..+.........+
T Consensus 80 ~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~--~~g~~~~~~~~~~ 153 (224)
T PLN02954 80 K----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE--YAGFDENEPTSRS 153 (224)
T ss_pred H----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc--EECccCCCcccCC
Confidence 2 125689999999999999987 99999999999999999996 35543222111000 0000000111234
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+|||.+++.++++++. ++|++||||.+|.
T Consensus 154 ~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di 182 (224)
T PLN02954 154 GGKAEAVQHIKKKHGY--KTMVMIGDGATDL 182 (224)
T ss_pred ccHHHHHHHHHHHcCC--CceEEEeCCHHHH
Confidence 7788999999998875 6999999999985
No 48
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.75 E-value=6.8e-18 Score=121.77 Aligned_cols=84 Identities=23% Similarity=0.249 Sum_probs=73.7
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
.++..+++.+++..||++|+ ++||.+.. .+..+..+++..+||.++.|...+.. ||+|.+|+
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S~e~g~~--------------KPDp~If~ 175 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVESCEVGLE--------------KPDPRIFQ 175 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhhhhhccC--------------CCChHHHH
Confidence 46777888899999999996 77776654 55888899999999999999988885 99999999
Q ss_pred HHHHHcCCCCCceEEecCcccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+++.+++.|++|++|||++..
T Consensus 176 ~al~~l~v~Pee~vhIgD~l~n 197 (237)
T KOG3085|consen 176 LALERLGVKPEECVHIGDLLEN 197 (237)
T ss_pred HHHHHhCCChHHeEEecCcccc
Confidence 9999999999999999998753
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.75 E-value=1.2e-17 Score=127.37 Aligned_cols=88 Identities=10% Similarity=-0.033 Sum_probs=71.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccce-------eeecccCCCCCCCCCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-------IICFETMNPNLSKATRPDEFPVLLKP 158 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~-------i~~~~~~~~~~~~~~~~~~~~~~~kp 158 (191)
+++.||++++++.|+++|+ |+|++.....+...+++++...+.. .+++...+ ..+.+||
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------~iv~~k~ 248 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------DIVDAQY 248 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------ccCCccc
Confidence 6899999999999999997 9999998888888899988664432 12222111 1234589
Q ss_pred CHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 159 SMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
|+..++.+++++|++|++|++|||+.||.
T Consensus 249 K~~~L~~la~~lgi~~~qtIaVGDg~NDl 277 (322)
T PRK11133 249 KADTLTRLAQEYEIPLAQTVAIGDGANDL 277 (322)
T ss_pred HHHHHHHHHHHcCCChhhEEEEECCHHHH
Confidence 99999999999999999999999999984
No 50
>PLN02811 hydrolase
Probab=99.75 E-value=4.3e-18 Score=124.22 Aligned_cols=152 Identities=16% Similarity=0.147 Sum_probs=101.8
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH----HH-HHcCCC--CCccchhhhhhcCC
Q 029593 12 LDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA----GL-RALGYD--IGADDYHGFVHGRL 84 (191)
Q Consensus 12 ~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~--~~~~~~~~~~~~~~ 84 (191)
|||||+|+...+..+|.+ +.+.+|.+... .. .....|.... .+ ...+.+ ...+.+........
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-SL----KAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-HH----HHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999999988888887 44666665321 11 1122233221 11 111221 11222222111110
Q ss_pred --CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHH-HHhhcCCCcccceeeecc--cCCCCCCCCCCCCCCCCCC
Q 029593 85 --PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT-CLKRLEIADCFDQIICFE--TMNPNLSKATRPDEFPVLL 156 (191)
Q Consensus 85 --~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~-~l~~~~l~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~~ 156 (191)
......++||+.++|+.|+++|+ |+||+....... ..+..++..+|+.+++++ +.+. +
T Consensus 71 ~~~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~--------------~ 136 (220)
T PLN02811 71 QDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ--------------G 136 (220)
T ss_pred HHHHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------C
Confidence 01246789999999999999987 999988765544 344457888999999988 6655 4
Q ss_pred CCCHHHHHHHHHHcC---CCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVAN---VDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~---~~p~~~i~iGDs~~~~ 187 (191)
||+|++|..++++++ ++|++|++|||+..|.
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di 170 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGV 170 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhH
Confidence 999999999999997 9999999999999874
No 51
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.74 E-value=2.2e-17 Score=120.40 Aligned_cols=150 Identities=11% Similarity=0.041 Sum_probs=91.9
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc---cHHHHHHcCCCCCccchhhhhhc
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS---TLAGLRALGYDIGADDYHGFVHG 82 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 82 (191)
++|+|||||||++++..+. .. +.++- ..+.+....+...... .......+......+++.+.+..
T Consensus 4 ~~vifDfDgTi~~~d~~~~-~~---------~~~~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 71 (219)
T PRK09552 4 IQIFCDFDGTITNNDNIIA-IM---------KKFAP--PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLE 71 (219)
T ss_pred cEEEEcCCCCCCcchhhHH-HH---------HHhCH--HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHh
Confidence 5999999999999986542 11 22221 2223322222222111 11111121111112333333332
Q ss_pred CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--cc--ceeeecccCCCCCCCCCCCCCCCCC
Q 029593 83 RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CF--DQIICFETMNPNLSKATRPDEFPVL 155 (191)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (191)
...++||+.++++.|+++|+ |+|++....++.+++.+ +.. .+ +..++++....
T Consensus 72 -----~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~-------------- 131 (219)
T PRK09552 72 -----TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI-------------- 131 (219)
T ss_pred -----CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE--------------
Confidence 26899999999999999987 99999999999999987 643 22 22333333222
Q ss_pred CCCCHHH----------HHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDA----------MKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~----------~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||.|.. ...++++++.++++|++||||.+|.
T Consensus 132 ~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di 173 (219)
T PRK09552 132 TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDL 173 (219)
T ss_pred eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHH
Confidence 3665543 3468888999999999999999985
No 52
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.72 E-value=1.3e-16 Score=113.45 Aligned_cols=96 Identities=10% Similarity=-0.024 Sum_probs=71.8
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCC--CCCCCCC----CCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNL--SKATRPD----EFPVLLKPS 159 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~--~~~~~~~----~~~~~~kp~ 159 (191)
.++.|++.++++.|+++|+ ++||+....++..++.+++..+|+.+++.+...... ....... .....+.+|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 6889999999999999886 999999999999999999999999988765422110 0000000 112234556
Q ss_pred HHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 160 MDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+..++.++++. |+++++||||.+|.
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~~D~ 175 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGVTDV 175 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCcchh
Confidence 88888887765 89999999999995
No 53
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.71 E-value=5.8e-17 Score=117.01 Aligned_cols=153 Identities=15% Similarity=0.141 Sum_probs=92.4
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH-HHHHHHhcccHHHHHHcCCCCCccchhhhhhcC
Q 029593 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-VELFKAYGSTLAGLRALGYDIGADDYHGFVHGR 83 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (191)
+++|+|||||||++. .|.. +.+..|.+........ ..+....+.....+.. ...+.+.+......
T Consensus 1 ~~~v~FD~DGTL~~~------~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~~~- 66 (205)
T PRK13582 1 MEIVCLDLEGVLVPE------IWIA-----FAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVIAT- 66 (205)
T ss_pred CeEEEEeCCCCChhh------HHHH-----HHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHHHh-
Confidence 379999999999932 2332 3456666532110000 0011111111112221 12344445444443
Q ss_pred CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (191)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~ 160 (191)
.+++||+.+++..|+++ + ++||+....++..++.+++..+|+..+.....+.. .+ ..+|.|
T Consensus 67 -----~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i--~~--------~~~~~p 130 (205)
T PRK13582 67 -----LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI--TG--------YDLRQP 130 (205)
T ss_pred -----CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE--EC--------cccccc
Confidence 67899999999999988 5 99999999999999999998888765543321110 00 002233
Q ss_pred HHHHHHHHHcCCCCCceEEecCccccc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.....+++.++..+++|++||||.+|.
T Consensus 131 ~~k~~~l~~~~~~~~~~v~iGDs~~D~ 157 (205)
T PRK13582 131 DGKRQAVKALKSLGYRVIAAGDSYNDT 157 (205)
T ss_pred chHHHHHHHHHHhCCeEEEEeCCHHHH
Confidence 344566666677789999999999985
No 54
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.69 E-value=9.7e-17 Score=107.23 Aligned_cols=80 Identities=16% Similarity=0.122 Sum_probs=71.0
Q ss_pred CCChhHHHHHHhhccCcE---EEecC-ChHHHHHHHhhcC-------CCcccceeeecccCCCCCCCCCCCCCCCCCCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLE-------IADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~-~~~~~~~~l~~~~-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp 158 (191)
+++||+.++|+.|+++|+ ++||+ ....+...++..+ +..+|+.+++++. +|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~------------------~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW------------------LP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC------------------Cc
Confidence 688999999999999998 99999 7888888889888 7888988888752 78
Q ss_pred CHHHHHHHHHHcC--CCCCceEEecCccccc
Q 029593 159 SMDAMKLALHVAN--VDPRHAVRQSSFLIFY 187 (191)
Q Consensus 159 ~~~~~~~~~~~~~--~~p~~~i~iGDs~~~~ 187 (191)
+|..+..+++++| ++|++|++|||++.+-
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 8899999999999 9999999999998763
No 55
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.69 E-value=4.7e-16 Score=109.65 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=73.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
+.+.|++.++++.++++|+ |+|++....++.+++.+|+...+...+..+..+. .++.........+..|+..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~--~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGL--LTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCE--EeCccCCcccCCcchHHHHHHH
Confidence 5688999999999999987 9999999999999999999877766554432111 1110000112334667889999
Q ss_pred HHHHcCCCCCceEEecCccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++++++++++++++||||.+|.
T Consensus 150 ~~~~~~~~~~~~~~iGDs~~D~ 171 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSVNDL 171 (177)
T ss_pred HHHHhCCCHHHEEEEeCCHHHH
Confidence 9999999999999999999985
No 56
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.68 E-value=7.9e-17 Score=110.35 Aligned_cols=85 Identities=16% Similarity=0.079 Sum_probs=65.5
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcc--cceee-ecccCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADC--FDQII-CFETMNPNLSKAT 147 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~--f~~i~-~~~~~~~~~~~~~ 147 (191)
+.++||+.++++.|+++|+ ++||++. ..+...++++++... +.... +++..+.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------ 99 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC------
Confidence 4688999999999999987 8999873 456677888888521 11111 1233332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||+|.+++.++++++++|++|++|||+..|.
T Consensus 100 --------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di 131 (147)
T TIGR01656 100 --------RKPKPGLILEALKRLGVDASRSLVVGDRLRDL 131 (147)
T ss_pred --------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence 49999999999999999999999999998764
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.67 E-value=8.8e-16 Score=111.30 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=70.8
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 161 (191)
...++||+.++|+.|+++|+ |+||++...++..+++. ++..+|+.++... .+ .||+|+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~-~g---------------~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT-VG---------------LKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC-cc---------------cCCCHH
Confidence 35799999999999999987 99999998888888775 5667777776532 23 399999
Q ss_pred HHHHHHHHcCCCCCceEEecCcccc
Q 029593 162 AMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.|..+++++|++|++|++|||+..|
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgDs~~D 181 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSDIINE 181 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeCCHHH
Confidence 9999999999999999999999865
No 58
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.67 E-value=3.3e-16 Score=110.98 Aligned_cols=88 Identities=15% Similarity=-0.019 Sum_probs=66.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
+.++||+.++|..|+++|+ |+||++. +.+...++.+++ .|+.++.+.....
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~--------- 96 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE--------- 96 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC---------
Confidence 5789999999999999987 9998763 334455666666 4677665432110
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.....||+|.++..+++.++++|++|++|||+.+|.
T Consensus 97 ~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di 133 (181)
T PRK08942 97 DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDL 133 (181)
T ss_pred CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHH
Confidence 0111259999999999999999999999999999874
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.65 E-value=2.6e-15 Score=108.41 Aligned_cols=166 Identities=13% Similarity=0.047 Sum_probs=105.5
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---cccHHHHHHcCCCCCccchhh
Q 029593 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY---GSTLAGLRALGYDIGADDYHG 78 (191)
Q Consensus 2 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (191)
.++.++++|||||||++.+ .+.. +.+..|....- ........... .........+....+.+....
T Consensus 2 ~~~~~L~vFD~D~TLi~~~-----~~~~-----~~~~~g~~~~v-~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~ 70 (212)
T COG0560 2 RRMKKLAVFDLDGTLINAE-----LIDE-----LARGAGVGEEV-LAITERAMRGELDFEESLRLRVALLKGLPVEVLEE 70 (212)
T ss_pred CCccceEEEecccchhhHH-----HHHH-----HHHHhCCHHHH-HHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHH
Confidence 4467899999999999821 2221 33444443221 11111111111 111111112222333344444
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (191)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (191)
...+. +.+.|++.+++..++++|. |+|++....++.+.+.+|++..+......++ +. +++. .....+.
T Consensus 71 ~~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~--ltG~-v~g~~~~ 141 (212)
T COG0560 71 VREEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GK--LTGR-VVGPICD 141 (212)
T ss_pred HHHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CE--Eece-eeeeecC
Confidence 44432 6899999999999999997 9999999999999999999887776655554 21 1111 1112334
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++-|...++.+++++|+++++++++|||.||.
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDl 173 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDL 173 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhH
Confidence 45678999999999999999999999999984
No 60
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.64 E-value=3.1e-16 Score=109.33 Aligned_cols=86 Identities=15% Similarity=0.058 Sum_probs=74.5
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecC-ChHHHHHHHhhcCCC---------cccceeeecccCCCCCCCCCCCCCCCC
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLEIA---------DCFDQIICFETMNPNLSKATRPDEFPV 154 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~-~~~~~~~~l~~~~l~---------~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (191)
...++||+.++++.|+++|+ ++||+ ....++..++.+++. .+|+.+++++....
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------- 109 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------- 109 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch-------------
Confidence 36889999999999999986 99988 788889999999998 99999999886544
Q ss_pred CCCCCHHHHHHHHHHc--CCCCCceEEecCccccc
Q 029593 155 LLKPSMDAMKLALHVA--NVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~--~~~p~~~i~iGDs~~~~ 187 (191)
.||.+.+++.+.+.+ +++|++|++|||++.|.
T Consensus 110 -~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 110 -AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred -HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 377777888887777 89999999999999874
No 61
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.64 E-value=2.1e-15 Score=108.36 Aligned_cols=154 Identities=11% Similarity=0.097 Sum_probs=89.0
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCCC
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP 85 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (191)
.+++|||||||++. .|.. +....|.............+..+......+... ...+.+.+...+..
T Consensus 2 ~la~FDlD~TLi~~------~w~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~~~--- 66 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIA-----FAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVIAT--- 66 (203)
T ss_pred eEEEEeCCcccHHH------HHHH-----HHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHHHh---
Confidence 56999999999954 2333 445666543221110001111111111111111 14445555555443
Q ss_pred CCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 86 YDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 86 ~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
+.++||+.++++.+++++. |+|++....++.+++.+|+..+|......++.+. .++. ....+|.+...
T Consensus 67 ---i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~--~tG~-----~~~~~~~K~~~ 136 (203)
T TIGR02137 67 ---LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR--VVGY-----QLRQKDPKRQS 136 (203)
T ss_pred ---CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe--eECe-----eecCcchHHHH
Confidence 6899999999999998754 9999999999999999999877763222111000 0000 00124444444
Q ss_pred HHHHHHcCCCCCceEEecCccccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
...+++.+. ++++||||.||.
T Consensus 137 l~~l~~~~~---~~v~vGDs~nDl 157 (203)
T TIGR02137 137 VIAFKSLYY---RVIAAGDSYNDT 157 (203)
T ss_pred HHHHHhhCC---CEEEEeCCHHHH
Confidence 444455553 899999999984
No 62
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.64 E-value=1e-15 Score=102.97 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCC--------hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSD--------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK 157 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~k 157 (191)
..++|++.+++..|+++|+ ++||+. ...+...++++++. ++.++.+. .. .|
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~--------------~K 85 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC--------------RK 85 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC--------------CC
Confidence 4688999999999999987 999998 77888899999885 33333332 22 49
Q ss_pred CCHHHHHHHHHHc-CCCCCceEEecC-ccccc
Q 029593 158 PSMDAMKLALHVA-NVDPRHAVRQSS-FLIFY 187 (191)
Q Consensus 158 p~~~~~~~~~~~~-~~~p~~~i~iGD-s~~~~ 187 (191)
|+|+++..+++++ +++|+++++||| +.+|.
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di 117 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVYVGDQDLTDL 117 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEEEcCCCcccH
Confidence 9999999999999 599999999999 67764
No 63
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.63 E-value=8.9e-16 Score=103.23 Aligned_cols=98 Identities=22% Similarity=0.259 Sum_probs=77.2
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC--CCCCCCCCCCCCCCHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK--ATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~--~~~~~~~~~~~kp~~~~~ 163 (191)
..+++++.++++.|+++|+ ++|++....++.+++++++...++.+++.+........ ...-......+||++..+
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL 102 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence 7899999999999999876 99999999999999999998888888876654321000 000001122239999999
Q ss_pred HHHHHHcCCCCCceEEecCcccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
..++++++..++++++|||+.+|
T Consensus 103 ~~~~~~~~~~~~~~~~igD~~~d 125 (139)
T cd01427 103 LAALKLLGVDPEEVLMVGDSLND 125 (139)
T ss_pred HHHHHHcCCChhhEEEeCCCHHH
Confidence 99999999999999999999987
No 64
>PRK06769 hypothetical protein; Validated
Probab=99.63 E-value=1.1e-15 Score=107.33 Aligned_cols=85 Identities=16% Similarity=0.049 Sum_probs=65.4
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChH--------HHHHHHhhcCCCcccceee-ecccCCCCCCCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN--------HAITCLKRLEIADCFDQII-CFETMNPNLSKATRPDEFPVLL 156 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~--------~~~~~l~~~~l~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 156 (191)
+.++||+.++|+.|+++|+ ++||++.. .....++.+|+..+|.... +++..+. .
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------~ 92 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------R 92 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC--------------C
Confidence 5689999999999999987 99987641 2333466777765544333 3343333 4
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
||+|.++..++++++++|++|++|||+++|.
T Consensus 93 KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di 123 (173)
T PRK06769 93 KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDI 123 (173)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHH
Confidence 9999999999999999999999999999874
No 65
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.62 E-value=3.7e-15 Score=108.33 Aligned_cols=85 Identities=8% Similarity=-0.030 Sum_probs=62.4
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc---ceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
.+++||+.++++.|+++|+ |+|++....++.+++.++....+ +.++.++.... .||+|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------------~~p~~~~ 134 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------------DWPHPCD 134 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------eCCCCCc
Confidence 6899999999999999987 99999999999999887443332 22333322221 3565544
Q ss_pred H----------HHHHHHcCCCCCceEEecCccccc
Q 029593 163 M----------KLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~----------~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+ ..++++++..++++++||||.+|+
T Consensus 135 ~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~ 169 (214)
T TIGR03333 135 GTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDV 169 (214)
T ss_pred cccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHH
Confidence 3 466677777899999999999985
No 66
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.60 E-value=1e-14 Score=106.65 Aligned_cols=78 Identities=13% Similarity=0.009 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHhhccCcE---EEecC----ChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNS----DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~----~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 161 (191)
..+.+++.++|+.++++|+ ++||. ....++..++.+|+..+|+.+++++.... +||++.
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~--------------~Kp~~~ 178 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ--------------YQYTKT 178 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC--------------CCCCHH
Confidence 4677789999999999987 99998 55678888899999999999999877654 377764
Q ss_pred HHHHHHHHcCCCCCceEEecCccccc
Q 029593 162 AMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.+++++++ +++|||+.+|+
T Consensus 179 ---~~l~~~~i----~i~vGDs~~DI 197 (237)
T TIGR01672 179 ---QWIQDKNI----RIHYGDSDNDI 197 (237)
T ss_pred ---HHHHhCCC----eEEEeCCHHHH
Confidence 35566676 79999999996
No 67
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.60 E-value=2.8e-15 Score=105.71 Aligned_cols=93 Identities=12% Similarity=0.005 Sum_probs=65.6
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
+.++||+.++|..|+++|+ |+||++. ......++..++. |+.++.+...... .....
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~---~~~~~ 99 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG---VEEFR 99 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc---ccccc
Confidence 5788999999999999987 9999874 2334455555554 6665543221100 00000
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
......||+|.++..++++++++|++|+||||+..|
T Consensus 100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~D 135 (176)
T TIGR00213 100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLED 135 (176)
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHH
Confidence 112236999999999999999999999999999876
No 68
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.60 E-value=1.6e-14 Score=104.01 Aligned_cols=95 Identities=12% Similarity=0.009 Sum_probs=72.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeec-ccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.++++.++++|. |+|++....++.+++++|+..+|...+.. ++ + .+++.. ..+...+++|...++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g--~~~g~~-~~~~~~g~~K~~~l~ 161 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-G--IYTGNI-DGNNCKGEGKVHALA 161 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-C--EEeCCc-cCCCCCChHHHHHHH
Confidence 4689999999999999886 99999999999999999998776652221 11 0 011111 112234677888999
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.++++.++++++|+++|||.+|.
T Consensus 162 ~~~~~~~~~~~~~~~~gDs~~D~ 184 (202)
T TIGR01490 162 ELLAEEQIDLKDSYAYGDSISDL 184 (202)
T ss_pred HHHHHcCCCHHHcEeeeCCcccH
Confidence 99999999999999999999984
No 69
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.59 E-value=2.6e-15 Score=103.94 Aligned_cols=83 Identities=16% Similarity=0.229 Sum_probs=68.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCC---------------hHHHHHHHhhcCCCcccceee-e----cccCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQII-C----FETMNPNLSK 145 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---------------~~~~~~~l~~~~l~~~f~~i~-~----~~~~~~~~~~ 145 (191)
+.++||+.++|+.|+++|+ ++||.+ ...+...++.+|+. |+.++ + +++...
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~---- 101 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC---- 101 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence 6889999999999999987 999963 44677788999996 76554 4 344443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||++.++..++++++++|++|++|||+.+|.
T Consensus 102 ----------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di 133 (161)
T TIGR01261 102 ----------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDM 133 (161)
T ss_pred ----------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHH
Confidence 49999999999999999999999999998763
No 70
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.58 E-value=1.2e-15 Score=110.58 Aligned_cols=78 Identities=21% Similarity=0.227 Sum_probs=67.7
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
.++.|++.+++..|+++|+ ++|+.+...+..+.+.+|+.. .|.... . ||.+.++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~-------~--------------kP~~k~~ 184 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI-------G--------------KPEPKIF 184 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE-------T--------------TTHHHHH
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc-------c--------------cccchhH
Confidence 4788999999999999997 999888999999999999943 222222 1 9999999
Q ss_pred HHHHHHcCCCCCceEEecCccccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
..+++.++++|++|+||||+.||-
T Consensus 185 ~~~i~~l~~~~~~v~~vGDg~nD~ 208 (215)
T PF00702_consen 185 LRIIKELQVKPGEVAMVGDGVNDA 208 (215)
T ss_dssp HHHHHHHTCTGGGEEEEESSGGHH
T ss_pred HHHHHHHhcCCCEEEEEccCHHHH
Confidence 999999999999999999999985
No 71
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.58 E-value=5.9e-15 Score=102.79 Aligned_cols=78 Identities=14% Similarity=0.100 Sum_probs=64.7
Q ss_pred CChhHHHHHHhhccCcE---EEecCChH------------HHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRN------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~------------~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (191)
++||+.++|+.|+++|+ |+||++.. .++..++.+|+.. +.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCC--------------
Confidence 68999999999999987 99997763 4677889999843 55565554332
Q ss_pred CCCCHHHHHHHHHHcC--CCCCceEEecCcc
Q 029593 156 LKPSMDAMKLALHVAN--VDPRHAVRQSSFL 184 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~--~~p~~~i~iGDs~ 184 (191)
.||+|.++..++++++ ++|++++||||+.
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 4999999999999999 9999999999986
No 72
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.57 E-value=9e-14 Score=101.07 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=79.2
Q ss_pred CCCccchhhhhhcCCCCCCCCCChhHHHHHHhh--ccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCC---
Q 029593 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSI--TQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP--- 141 (191)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--- 141 (191)
++..+++.+.+.. +++.|++.++++.+ ++.|+ |+|+++.-+++.+++..|+...|+.|++-...-.
T Consensus 57 gvt~~~I~~~l~~------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G 130 (234)
T PF06888_consen 57 GVTPEDIRDALRS------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG 130 (234)
T ss_pred CCCHHHHHHHHHc------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc
Confidence 3666777777766 79999999999999 44666 9999999999999999999999988876321110
Q ss_pred ----CCCCCCCCCCCCCCCCC---CHHHHHHHHHH---cCCCCCceEEecCcccccc
Q 029593 142 ----NLSKATRPDEFPVLLKP---SMDAMKLALHV---ANVDPRHAVRQSSFLIFYF 188 (191)
Q Consensus 142 ----~~~~~~~~~~~~~~~kp---~~~~~~~~~~~---~~~~p~~~i~iGDs~~~~~ 188 (191)
.++.. +..-..-| |...++..++. -|+..+++++||||.|||=
T Consensus 131 ~l~v~pyh~----h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 131 RLRVRPYHS----HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred eEEEeCccC----CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 01111 11111111 46777777776 3788899999999999983
No 73
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.50 E-value=1.2e-13 Score=106.09 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=70.9
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh----cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR----LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~----~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
.+++++.++|..|+++|+ |+|+++...+...++. +++..+|+.+.+. +||+|..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-------------------~~pk~~~ 91 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-------------------WGPKSES 91 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-------------------cCchHHH
Confidence 468999999999999997 9999999999999999 8888889888664 2999999
Q ss_pred HHHHHHHcCCCCCceEEecCcccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+..+++++|+.|+++++|||++.+
T Consensus 92 i~~~~~~l~i~~~~~vfidD~~~d 115 (320)
T TIGR01686 92 LRKIAKKLNLGTDSFLFIDDNPAE 115 (320)
T ss_pred HHHHHHHhCCCcCcEEEECCCHHH
Confidence 999999999999999999999875
No 74
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.49 E-value=2.2e-13 Score=91.93 Aligned_cols=73 Identities=23% Similarity=0.319 Sum_probs=64.2
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
....|.+++-+..++++|+ |+||++...+..+.+.+|+ +++..+ .||.+..+++
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi~~A-------------------~KP~~~~fr~ 101 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFIYRA-------------------KKPFGRAFRR 101 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----ceeecc-------------------cCccHHHHHH
Confidence 4667788888899999987 9999999999999999988 566654 3999999999
Q ss_pred HHHHcCCCCCceEEecCcc
Q 029593 166 ALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~ 184 (191)
++++++++|++|+||||.+
T Consensus 102 Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 102 ALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred HHHHcCCChhHEEEEcchh
Confidence 9999999999999999986
No 75
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.45 E-value=2.1e-14 Score=99.00 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=59.7
Q ss_pred HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (191)
Q Consensus 98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p 174 (191)
+++.|+++|+ |+||++...+...++.+|+..+|+. .+|++.++..++++++++|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-----------------------~~~k~~~~~~~~~~~~~~~ 92 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-----------------------QSNKLIAFSDILEKLALAP 92 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-----------------------ccchHHHHHHHHHHcCCCH
Confidence 7899999987 9999999999999999999776641 1778999999999999999
Q ss_pred CceEEecCccccc
Q 029593 175 RHAVRQSSFLIFY 187 (191)
Q Consensus 175 ~~~i~iGDs~~~~ 187 (191)
++|++|||+.||.
T Consensus 93 ~~~~~vGDs~~D~ 105 (154)
T TIGR01670 93 ENVAYIGDDLIDW 105 (154)
T ss_pred HHEEEECCCHHHH
Confidence 9999999999984
No 76
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.38 E-value=1.6e-12 Score=100.09 Aligned_cols=88 Identities=14% Similarity=0.129 Sum_probs=67.1
Q ss_pred CCCChhHHHHHHhhccCcE---EEecC---------------ChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~---------------~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
..++||+.++|+.|+++|+ |+||+ ....+..+++.+++. |+.++.+.....
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~s--------- 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPE--------- 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCc---------
Confidence 6899999999999999986 99995 234566677888883 666543321110
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.....||+|.++..+++++++.|++++||||+.+|.
T Consensus 98 d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 98 DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHH
Confidence 1112359999999999999999999999999999875
No 77
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.38 E-value=4.4e-13 Score=101.19 Aligned_cols=86 Identities=16% Similarity=0.062 Sum_probs=62.0
Q ss_pred CCChhHHHHHHhhccCcE--EEecCChHHH-HHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI--IFTNSDRNHA-ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~--i~t~~~~~~~-~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
..++++.+++..|+++|. ++||.+.... ...+...+...+|+.+....... ....+||+|.++..+
T Consensus 143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~-----------~~~~gKP~p~~~~~~ 211 (279)
T TIGR01452 143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ-----------PLVVGKPSPYMFECI 211 (279)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc-----------eeccCCCCHHHHHHH
Confidence 457899999999998876 8888876432 12234455666666554321111 112369999999999
Q ss_pred HHHcCCCCCceEEecCcc-cc
Q 029593 167 LHVANVDPRHAVRQSSFL-IF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~-~~ 186 (191)
+++++++|++|+||||++ .|
T Consensus 212 ~~~~~~~~~~~lmIGD~~~tD 232 (279)
T TIGR01452 212 TENFSIDPARTLMVGDRLETD 232 (279)
T ss_pred HHHhCCChhhEEEECCChHHH
Confidence 999999999999999995 65
No 78
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.36 E-value=4.2e-12 Score=88.95 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=61.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCC-hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.++|+.|+++|+ ++||++ ...+...++.+++..++ .. .||+|.++.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~--------------~KP~p~~~~ 98 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA--------------VKPPGCAFR 98 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC--------------CCCChHHHH
Confidence 5789999999999999886 999988 56677777777763221 11 399999999
Q ss_pred HHHHHcCCCCCceEEecCcc-cc
Q 029593 165 LALHVANVDPRHAVRQSSFL-IF 186 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~-~~ 186 (191)
.++++++++|++|++|||++ .|
T Consensus 99 ~~l~~~~~~~~~~l~IGDs~~~D 121 (170)
T TIGR01668 99 RAHPEMGLTSEQVAVVGDRLFTD 121 (170)
T ss_pred HHHHHcCCCHHHEEEECCcchHH
Confidence 99999999999999999997 45
No 79
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.35 E-value=7.4e-11 Score=81.68 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=67.4
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
.+.+.||+++++..|+++|. ++|++.+..+..+...+|+.. .+....--+..++ |.+--...+...+--++..
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk--~~gfd~~~ptsdsggKa~~ 163 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK--YLGFDTNEPTSDSGGKAEV 163 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc--ccccccCCccccCCccHHH
Confidence 47889999999999999987 999999999999999999965 3322211111111 1110011223334455778
Q ss_pred HHHHHHHcCCCCCceEEecCccccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+..+.+ +.....++||||+.||-
T Consensus 164 i~~lrk--~~~~~~~~mvGDGatDl 186 (227)
T KOG1615|consen 164 IALLRK--NYNYKTIVMVGDGATDL 186 (227)
T ss_pred HHHHHh--CCChheeEEecCCcccc
Confidence 888777 88889999999999984
No 80
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.35 E-value=3.2e-12 Score=93.47 Aligned_cols=90 Identities=11% Similarity=0.008 Sum_probs=65.0
Q ss_pred cchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCC----hHHHHHHHhhcCC--CcccceeeecccCCCCCC
Q 029593 74 DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSD----RNHAITCLKRLEI--ADCFDQIICFETMNPNLS 144 (191)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~----~~~~~~~l~~~~l--~~~f~~i~~~~~~~~~~~ 144 (191)
+++++.+.... .....+.||++++++.|+++|+ ++||.+ ...++..++.+|+ ..+|+.+++++..
T Consensus 99 ~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~----- 172 (237)
T PRK11009 99 QKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP----- 172 (237)
T ss_pred HHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-----
Confidence 33444443321 2336899999999999999987 889854 4456667777999 8889988887753
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 145 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.||.+.. .++++++ +++|||+.+|+
T Consensus 173 -----------~K~~K~~---~l~~~~i----~I~IGDs~~Di 197 (237)
T PRK11009 173 -----------GQYTKTQ---WLKKKNI----RIFYGDSDNDI 197 (237)
T ss_pred -----------CCCCHHH---HHHhcCC----eEEEcCCHHHH
Confidence 2666543 4556665 99999999996
No 81
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.35 E-value=1.3e-11 Score=86.99 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=74.6
Q ss_pred CCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE----EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC
Q 029593 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (191)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~ 145 (191)
+..++++.+.+.. ++..||+.+++..+++.|- |+|.++.-.++.+++.+++..+|+.|++-.. ...+..
T Consensus 70 gv~~~~ik~~~r~------iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa-~~da~G 142 (256)
T KOG3120|consen 70 GVRIAEIKQVLRS------IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPA-CVDASG 142 (256)
T ss_pred CCCHHHHHHHHhc------CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCc-ccCCCC
Confidence 4555666666655 8999999999999999884 9999999999999999999999998876221 100000
Q ss_pred C-CC-CCC--CCCCCCC----CHHHHHHHHH---HcCCCCCceEEecCcccccc
Q 029593 146 A-TR-PDE--FPVLLKP----SMDAMKLALH---VANVDPRHAVRQSSFLIFYF 188 (191)
Q Consensus 146 ~-~~-~~~--~~~~~kp----~~~~~~~~~~---~~~~~p~~~i~iGDs~~~~~ 188 (191)
. .+ |-+ .....=| |...+..+.. +-|+..+++++||||-|||=
T Consensus 143 ~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~C 196 (256)
T KOG3120|consen 143 RLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFC 196 (256)
T ss_pred cEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence 0 00 000 1111112 2333333332 23788899999999999983
No 82
>PRK11590 hypothetical protein; Provisional
Probab=99.35 E-value=1.1e-11 Score=89.80 Aligned_cols=92 Identities=9% Similarity=-0.109 Sum_probs=57.7
Q ss_pred CCCChhHHHHH-HhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLL-CSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l-~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.+.+ +.++++|. |+||+....++.+++.+++.. .+.+++++... .+++.+ ....+.+.-|. +
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~--~~tg~~-~g~~c~g~~K~---~ 166 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR--RYGGWV-LTLRCLGHEKV---A 166 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE--EEccEE-CCccCCChHHH---H
Confidence 46799999999 56888785 999999999999999988522 23333333111 111111 01112233333 3
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.+.+.++.+...+.+.|||.+|-
T Consensus 167 ~l~~~~~~~~~~~~aY~Ds~~D~ 189 (211)
T PRK11590 167 QLERKIGTPLRLYSGYSDSKQDN 189 (211)
T ss_pred HHHHHhCCCcceEEEecCCcccH
Confidence 34444466778899999999984
No 83
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.34 E-value=1.4e-11 Score=91.55 Aligned_cols=86 Identities=12% Similarity=-0.044 Sum_probs=68.4
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccccee------eecccCCCCCCCCCCCCCCCCCCCC
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQI------ICFETMNPNLSKATRPDEFPVLLKP 158 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i------~~~~~~~~~~~~~~~~~~~~~~~kp 158 (191)
.+.+.||+.++++.|+++|+ |+|++....++.+++++++...+..+ ++.+... .++|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvl--------------tG~~ 184 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVL--------------KGFK 184 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeE--------------eCCC
Confidence 47899999999999999987 99999999999999999987655555 3222211 2344
Q ss_pred CH---------HHHHHHHHHcC--CCCCceEEecCccccc
Q 029593 159 SM---------DAMKLALHVAN--VDPRHAVRQSSFLIFY 187 (191)
Q Consensus 159 ~~---------~~~~~~~~~~~--~~p~~~i~iGDs~~~~ 187 (191)
.| ..++..++.++ .++++|++||||.+|-
T Consensus 185 ~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl 224 (277)
T TIGR01544 185 GPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDL 224 (277)
T ss_pred CCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhh
Confidence 44 56667888998 8999999999999984
No 84
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.32 E-value=4.5e-12 Score=96.71 Aligned_cols=92 Identities=12% Similarity=0.003 Sum_probs=75.2
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.+++..|+++|+ ++||++....+..++.+++.. +|+.+++.+.... |. ......||+|..+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~--~~-----~~~~~~kp~p~~~~ 258 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH--FQ-----REQGDKRPDDVVKE 258 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh--hc-----ccCCCCCCcHHHHH
Confidence 4789999999999999986 999999999999999999986 8999888873110 00 00011499999999
Q ss_pred HHHHHcCC-CCCceEEecCccccc
Q 029593 165 LALHVANV-DPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~-~p~~~i~iGDs~~~~ 187 (191)
.++++++. .|++|++|||+.+|-
T Consensus 259 ~~l~~~~~~~~~~~~~vgD~~~d~ 282 (300)
T PHA02530 259 EIFWEKIAPKYDVLLAVDDRDQVV 282 (300)
T ss_pred HHHHHHhccCceEEEEEcCcHHHH
Confidence 99999988 689999999999874
No 85
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.31 E-value=8.1e-13 Score=98.52 Aligned_cols=85 Identities=15% Similarity=0.020 Sum_probs=67.8
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~ 167 (191)
.++++.+++..|++.+. ++||.+.......+..+|+..+|+.+.++.... ....+||+|.+++.++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~~~ 189 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTK-----------ATVVGKPSKTFFLEAL 189 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCC-----------ceeecCCCHHHHHHHH
Confidence 46888999999987765 888888776666677788888888777654322 1223699999999999
Q ss_pred HHcCCCCCceEEecCcc-cc
Q 029593 168 HVANVDPRHAVRQSSFL-IF 186 (191)
Q Consensus 168 ~~~~~~p~~~i~iGDs~-~~ 186 (191)
++++++|++++||||++ +|
T Consensus 190 ~~~~~~~~~~~~vGD~~~~D 209 (257)
T TIGR01458 190 RATGCEPEEAVMIGDDCRDD 209 (257)
T ss_pred HHhCCChhhEEEECCCcHHH
Confidence 99999999999999996 55
No 86
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.28 E-value=4.2e-12 Score=86.96 Aligned_cols=82 Identities=15% Similarity=0.049 Sum_probs=72.0
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++||+.++|+.|++ ++ |+|++....++.+++++++.. +|+.++++++... +||. +.
T Consensus 44 v~l~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~--------------~KP~---~~ 105 (148)
T smart00577 44 VKKRPGVDEFLKRASE-LFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF--------------VKGK---YV 105 (148)
T ss_pred EEECCCHHHHHHHHHh-ccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc--------------cCCe---Ee
Confidence 5789999999999984 45 999999999999999999865 5688999888766 4886 99
Q ss_pred HHHHHcCCCCCceEEecCcccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFYF 188 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~~ 188 (191)
++++.++.+|++|++|||+++++-
T Consensus 106 k~l~~l~~~p~~~i~i~Ds~~~~~ 129 (148)
T smart00577 106 KDLSLLGRDLSNVIIIDDSPDSWP 129 (148)
T ss_pred ecHHHcCCChhcEEEEECCHHHhh
Confidence 999999999999999999998864
No 87
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.28 E-value=1.9e-11 Score=98.68 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=66.3
Q ss_pred CChhHHHHHHhhccCcE---EEecCCh------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDR------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (191)
++|++.+.|..|+++|+ |+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 57999999999999987 8999766 3577788888884 787776654332
Q ss_pred CCCCHHHHHHHHHHcC----CCCCceEEecCcccc
Q 029593 156 LKPSMDAMKLALHVAN----VDPRHAVRQSSFLIF 186 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~----~~p~~~i~iGDs~~~ 186 (191)
.||+|.++..++++++ +++++++||||+..|
T Consensus 262 RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr 296 (526)
T TIGR01663 262 RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGR 296 (526)
T ss_pred CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccc
Confidence 5999999999999985 899999999999854
No 88
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.24 E-value=9.1e-11 Score=87.21 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChH---HHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 161 (191)
..+.||+.+++..|+++|+ ++||+... .+...++.+|+...+ +.++..+. .++++.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-----------------~~~K~~ 179 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-----------------KSSKES 179 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-----------------CCCcHH
Confidence 5789999999999999986 88997743 455778888997643 44554432 156678
Q ss_pred HHHHHHHHcCCCCCceEEecCccccccc
Q 029593 162 AMKLALHVANVDPRHAVRQSSFLIFYFD 189 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iGDs~~~~~~ 189 (191)
....+.+.+++ +++|||+.+|+=+
T Consensus 180 rr~~I~~~y~I----vl~vGD~~~Df~~ 203 (266)
T TIGR01533 180 RRQKVQKDYEI----VLLFGDNLLDFDD 203 (266)
T ss_pred HHHHHHhcCCE----EEEECCCHHHhhh
Confidence 88888887777 8999999999844
No 89
>PRK08238 hypothetical protein; Validated
Probab=99.23 E-value=1.5e-10 Score=93.07 Aligned_cols=79 Identities=15% Similarity=0.094 Sum_probs=61.7
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
.+..|++.+.++.++++|. ++|+++...++.+++++|+ |+.++++++... .||++.. ..
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~--------------~kg~~K~-~~ 132 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN--------------LKGAAKA-AA 132 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc--------------cCCchHH-HH
Confidence 5678999999999999987 9999999999999999987 889999886543 2444322 23
Q ss_pred HHHHcCCCCCceEEecCccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.+.++ .++++++|||.+|.
T Consensus 133 l~~~l~--~~~~~yvGDS~~Dl 152 (479)
T PRK08238 133 LVEAFG--ERGFDYAGNSAADL 152 (479)
T ss_pred HHHHhC--ccCeeEecCCHHHH
Confidence 335554 36689999999985
No 90
>PLN02645 phosphoglycolate phosphatase
Probab=99.22 E-value=2.9e-11 Score=92.63 Aligned_cols=84 Identities=14% Similarity=-0.000 Sum_probs=60.5
Q ss_pred hhHHHHHHhhcc-CcE--EEecCChHH-HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 029593 93 PQLRNLLCSITQ-RKI--IFTNSDRNH-AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH 168 (191)
Q Consensus 93 ~~~~~~l~~l~~-~g~--i~t~~~~~~-~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 168 (191)
..+......|+. .|. ++||.+... ....+...|...+|+.+.++.... ....+||+|.++..+++
T Consensus 173 ~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~a~~ 241 (311)
T PLN02645 173 YKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTERE-----------PLVVGKPSTFMMDYLAN 241 (311)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCC-----------cccCCCChHHHHHHHHH
Confidence 344455566654 465 888888643 233345667777888877655432 22347999999999999
Q ss_pred HcCCCCCceEEecCcc-ccc
Q 029593 169 VANVDPRHAVRQSSFL-IFY 187 (191)
Q Consensus 169 ~~~~~p~~~i~iGDs~-~~~ 187 (191)
.++++|++++||||++ +|.
T Consensus 242 ~~~~~~~~~~~VGD~~~~Di 261 (311)
T PLN02645 242 KFGIEKSQICMVGDRLDTDI 261 (311)
T ss_pred HcCCCcccEEEEcCCcHHHH
Confidence 9999999999999997 663
No 91
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.22 E-value=1.7e-11 Score=89.93 Aligned_cols=32 Identities=9% Similarity=-0.045 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.+|+.+++.+++.+|++++++++|||+.||.
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi 186 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDL 186 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhH
Confidence 46679999999999999999999999999984
No 92
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.21 E-value=1.4e-10 Score=80.86 Aligned_cols=87 Identities=17% Similarity=0.110 Sum_probs=65.1
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~ 150 (191)
+...|++.+++..|++.|+ ++||.+- ..+...++..|+ .|+.+...-++..
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~--------- 98 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPE--------- 98 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC---------
Confidence 5788999999999999987 8888432 223333444444 5677666554443
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
......||++.++..+++++++++++.++|||++.|
T Consensus 99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~D 134 (181)
T COG0241 99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTD 134 (181)
T ss_pred CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHH
Confidence 334556999999999999999999999999999866
No 93
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.21 E-value=2.7e-11 Score=90.00 Aligned_cols=84 Identities=11% Similarity=-0.020 Sum_probs=53.1
Q ss_pred CCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcC---CCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLE---IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~---l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
...++.+...+..|++ |. ++||.+........-..+ +...+....+.+... .+||+|.++
T Consensus 120 ~~~y~~l~~a~~~l~~-g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~--------------~gKP~~~~~ 184 (249)
T TIGR01457 120 QIDYEKFATATLAIRK-GAHFIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVY--------------IGKPNAIIM 184 (249)
T ss_pred CCCHHHHHHHHHHHHC-CCeEEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccc--------------cCCChHHHH
Confidence 3456677777777753 43 788876643211100011 111233333333332 369999999
Q ss_pred HHHHHHcCCCCCceEEecCcc-ccc
Q 029593 164 KLALHVANVDPRHAVRQSSFL-IFY 187 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~-~~~ 187 (191)
+.+++.++++|++++||||++ +|.
T Consensus 185 ~~~~~~~~~~~~~~~~VGD~~~~Di 209 (249)
T TIGR01457 185 EKAVEHLGTEREETLMVGDNYLTDI 209 (249)
T ss_pred HHHHHHcCCCcccEEEECCCchhhH
Confidence 999999999999999999997 664
No 94
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.19 E-value=3.5e-11 Score=90.50 Aligned_cols=31 Identities=3% Similarity=-0.111 Sum_probs=28.6
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
-.|+.+++.+++.+|++++++++|||+.||.
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi 228 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDI 228 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhH
Confidence 4568999999999999999999999999995
No 95
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.13 E-value=1.5e-10 Score=85.73 Aligned_cols=80 Identities=16% Similarity=0.034 Sum_probs=65.5
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHH--HHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAI--TCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~--~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
..++||+.++++.|+++|+ ++||+++.... ..++.+|+.. .|+.++++.... ...
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~-------------------~~~ 83 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA-------------------VQM 83 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-------------------HHH
Confidence 3678999999999999986 99998877655 7889999988 899999876432 246
Q ss_pred HHHHHHHcCCCCCceEEecCccccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+..++++++.+|+++++|||+..|.
T Consensus 84 l~~~~~~~~~~~~~~~~vGd~~~d~ 108 (242)
T TIGR01459 84 ILESKKRFDIRNGIIYLLGHLENDI 108 (242)
T ss_pred HHhhhhhccCCCceEEEeCCcccch
Confidence 7777788899999999999987654
No 96
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.13 E-value=3.2e-10 Score=80.79 Aligned_cols=89 Identities=17% Similarity=0.124 Sum_probs=58.0
Q ss_pred hhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC--CCCCCCCCCCCCCCCCCHHHHHHH-
Q 029593 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN--LSKATRPDEFPVLLKPSMDAMKLA- 166 (191)
Q Consensus 93 ~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--~~~~~~~~~~~~~~kp~~~~~~~~- 166 (191)
|++.+++..++++|+ |+|++....++.+++.+++.... +++.+..... ...+. ......+ -|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~~~~~~~~--~~~~~~~-~K~~~l~~~~ 166 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNGGGIFTGR--ITGSNCG-GKAEALKELY 166 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTTCCEEEEE--EEEEEES-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecccceeeee--ECCCCCC-cHHHHHHHHH
Confidence 777799999998887 99999999999999999886521 2222210000 00000 0000000 156777777
Q ss_pred --HHHcCCCCCceEEecCccccc
Q 029593 167 --LHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 167 --~~~~~~~p~~~i~iGDs~~~~ 187 (191)
... +..+..+++||||.+|.
T Consensus 167 ~~~~~-~~~~~~~~~iGDs~~D~ 188 (192)
T PF12710_consen 167 IRDEE-DIDPDRVIAIGDSINDL 188 (192)
T ss_dssp HHHHH-THTCCEEEEEESSGGGH
T ss_pred HHhhc-CCCCCeEEEEECCHHHH
Confidence 555 89999999999999985
No 97
>PRK10444 UMP phosphatase; Provisional
Probab=99.12 E-value=1.7e-10 Score=85.54 Aligned_cols=34 Identities=21% Similarity=0.087 Sum_probs=30.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593 154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY 187 (191)
Q Consensus 154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~ 187 (191)
..+||+|.++..+++.++++|++|+||||++ +|.
T Consensus 171 ~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi 205 (248)
T PRK10444 171 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDI 205 (248)
T ss_pred ccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHH
Confidence 3479999999999999999999999999997 563
No 98
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.07 E-value=1.9e-09 Score=74.04 Aligned_cols=81 Identities=7% Similarity=-0.005 Sum_probs=66.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
.+++|++.+.+.+.++.|+ |.|+++...+.-+..+. ++..+|+..+.... + +|.....
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtti-G---------------~KrE~~S 165 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTI-G---------------KKRESQS 165 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccc-c---------------ccccchh
Confidence 5789999999999999997 99999988777666554 45567777776532 3 2888899
Q ss_pred HHHHHHHcCCCCCceEEecCccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
|.+++...|++|.+++++.|.++
T Consensus 166 Y~kIa~~iGl~p~eilFLSDn~~ 188 (229)
T COG4229 166 YAKIAGDIGLPPAEILFLSDNPE 188 (229)
T ss_pred HHHHHHhcCCCchheEEecCCHH
Confidence 99999999999999999999875
No 99
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.06 E-value=4e-09 Score=80.99 Aligned_cols=97 Identities=21% Similarity=0.252 Sum_probs=68.9
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc-C-------CCcccceeeecccCCCCCCCCCCC------C
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-E-------IADCFDQIICFETMNPNLSKATRP------D 150 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~-~-------l~~~f~~i~~~~~~~~~~~~~~~~------~ 150 (191)
.+.+.|++.++|+.|+++|+ |+||++...+...++.+ + +..+||.++++..... =|+...| .
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~-FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPG-FFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCc-ccCCCCceEEEeCC
Confidence 36779999999999999987 99999999999999996 7 8899999888654221 1211111 0
Q ss_pred CCCCC------CCC----CHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 151 EFPVL------LKP----SMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 151 ~~~~~------~kp----~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
..... .+| ...-...+.+.+++++++|++|||++.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~ 305 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIY 305 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcch
Confidence 00000 011 113467788889999999999999863
No 100
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.05 E-value=8e-09 Score=74.79 Aligned_cols=92 Identities=8% Similarity=-0.066 Sum_probs=55.8
Q ss_pred CCCChhHHHHHH-hhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLC-SITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~-~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.+.++ .++++|. |+||+....++.+.+..++... +.+++++.... ..+.+ ....+.+.-|...++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~--~gg~~-~g~~c~g~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERG--NGGWV-LPLRCLGHEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEe--CCceE-cCccCCChHHHHHHH
Confidence 367999999996 7888886 9999999999999888655332 22333321100 00000 111222333344344
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.++.+.+.+.+.|||.+|-
T Consensus 169 ---~~~~~~~~~~~aYsDS~~D~ 188 (210)
T TIGR01545 169 ---QKIGSPLKLYSGYSDSKQDN 188 (210)
T ss_pred ---HHhCCChhheEEecCCcccH
Confidence 44455667889999999984
No 101
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.05 E-value=3.2e-10 Score=79.03 Aligned_cols=68 Identities=13% Similarity=0.088 Sum_probs=59.6
Q ss_pred HHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 029593 97 NLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173 (191)
Q Consensus 97 ~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 173 (191)
..+..|+++|+ |+||++...++..++.+++..+|+. .||+|..++.++++++++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-----------------------~kpkp~~~~~~~~~l~~~ 97 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-----------------------IKKKTEPYAQMLEEMNIS 97 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-----------------------CCCCHHHHHHHHHHcCcC
Confidence 45667777886 9999999999999999999877762 178899999999999999
Q ss_pred CCceEEecCccccc
Q 029593 174 PRHAVRQSSFLIFY 187 (191)
Q Consensus 174 p~~~i~iGDs~~~~ 187 (191)
|++|++|||+.||.
T Consensus 98 ~~ev~~iGD~~nDi 111 (169)
T TIGR02726 98 DAEVCYVGDDLVDL 111 (169)
T ss_pred HHHEEEECCCHHHH
Confidence 99999999999985
No 102
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.99 E-value=4e-10 Score=82.42 Aligned_cols=32 Identities=9% Similarity=-0.181 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.+|+.+++.+++.+|++++++++|||+.||.
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi 178 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDI 178 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhH
Confidence 46788999999999999999999999999984
No 103
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.98 E-value=4.3e-10 Score=81.80 Aligned_cols=65 Identities=6% Similarity=-0.064 Sum_probs=43.4
Q ss_pred EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 108 i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.++...+.+...++..++...... ...+... .+..|..+++.+++.+|++++++++|||+.||.
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ei~~--------------~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 112 MREGKDVDEVREIIKERGLNLVDSG-FAIHIMK--------------KGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred ecCCccHHHHHHHHHhCCeEEEecC-ceEEEec--------------CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 3444455666667776555332211 1112111 246678899999999999999999999999984
No 104
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.96 E-value=2.1e-09 Score=80.10 Aligned_cols=99 Identities=19% Similarity=0.333 Sum_probs=71.0
Q ss_pred ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC-----------------CCC
Q 029593 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR-----------------PDE 151 (191)
Q Consensus 92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~-----------------~~~ 151 (191)
.|++.++|++|+++|+ |+|++.+..+...++.+|+..+|+.++++.+.....-.+.. ...
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~ 227 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTD 227 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCC
Confidence 4889999999999996 99999999999999999999999999988776553111100 012
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceE-EecCcc--ccccccC
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAV-RQSSFL--IFYFDFF 191 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i-~iGDs~--~~~~~~~ 191 (191)
...++|. |......+.+.|+..=+++ .|+|=. |+-||||
T Consensus 228 ~~~lPKS-prvvl~yL~~~gvn~~KtitLVDDl~~Nn~~YD~f 269 (301)
T TIGR01684 228 GKRLPKS-PRVVLWYLYDLGVNYFKSITLVDDLADNNFNYDYF 269 (301)
T ss_pred CCcCCCC-CeehHHHHHHcCCceeeeEEEeccCcccCccceeE
Confidence 2344554 7788888999998775554 455533 3345554
No 105
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.95 E-value=1.3e-09 Score=81.66 Aligned_cols=33 Identities=3% Similarity=-0.193 Sum_probs=30.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.+-.|..+++.+++.+|++++++++||||.||.
T Consensus 186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~ 218 (264)
T COG0561 186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDI 218 (264)
T ss_pred CCCchHHHHHHHHHHhCCCHHHeEEeCCccccH
Confidence 356679999999999999999999999999995
No 106
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.95 E-value=5.8e-09 Score=77.27 Aligned_cols=36 Identities=28% Similarity=0.206 Sum_probs=34.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
.++.+.+||++.++..+.+++++.|++++||||+++
T Consensus 217 R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~ 252 (306)
T KOG2882|consen 217 RQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLD 252 (306)
T ss_pred CCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccch
Confidence 678999999999999999999999999999999986
No 107
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.95 E-value=1.3e-09 Score=82.14 Aligned_cols=30 Identities=3% Similarity=-0.152 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHcCCCC-CceEEecCccccc
Q 029593 158 PSMDAMKLALHVANVDP-RHAVRQSSFLIFY 187 (191)
Q Consensus 158 p~~~~~~~~~~~~~~~p-~~~i~iGDs~~~~ 187 (191)
.|..+++.+++.+|+++ +++++|||+.||.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi 220 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDL 220 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhH
Confidence 56789999999999999 9999999999984
No 108
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.93 E-value=1.7e-09 Score=78.90 Aligned_cols=31 Identities=6% Similarity=-0.228 Sum_probs=28.0
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
-.|+.+++.+++.+|+++++|++|||+.||.
T Consensus 178 ~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi 208 (221)
T TIGR02463 178 SSKGKAANWLKATYNQPDVKTLGLGDGPNDL 208 (221)
T ss_pred CCHHHHHHHHHHHhCCCCCcEEEECCCHHHH
Confidence 4467889999999999999999999999984
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.92 E-value=1.8e-09 Score=81.37 Aligned_cols=32 Identities=3% Similarity=-0.196 Sum_probs=29.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.+|++++++++|||+.||.
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi 217 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDR 217 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHH
Confidence 35579999999999999999999999999984
No 110
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.90 E-value=9.5e-09 Score=76.68 Aligned_cols=99 Identities=20% Similarity=0.337 Sum_probs=70.9
Q ss_pred ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC---C--------------CCCC
Q 029593 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA---T--------------RPDE 151 (191)
Q Consensus 92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~---~--------------~~~~ 151 (191)
.|++.++|++|+++|+ |+||+++..+...++.+|+..+|+.+++++......... . -...
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~ 229 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD 229 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence 3888999999999997 899999999999999999999999988877655432111 0 0011
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceE-EecCcc--ccccccC
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAV-RQSSFL--IFYFDFF 191 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i-~iGDs~--~~~~~~~ 191 (191)
...+||. |.....-+.+.|+..=+++ .|+|=. |+-||||
T Consensus 230 ~~~lPKS-prvVl~yL~~~gvn~~KtiTLVDDl~~Nn~~YD~f 271 (303)
T PHA03398 230 VKNLPKS-PRVVLWYLRKKGVNYFKTITLVDDLKSNNYSYDYF 271 (303)
T ss_pred ccCCCCC-CeehHHHHHHcCcceeccEEEeccCcccCccceeE
Confidence 2255554 7888999999999875544 456533 3445554
No 111
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.90 E-value=2.6e-09 Score=80.29 Aligned_cols=32 Identities=6% Similarity=-0.113 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.+|++++++++|||+.||.
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi 225 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDI 225 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhH
Confidence 46678999999999999999999999999984
No 112
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1e-09 Score=81.44 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=30.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
.+.|||++.+++.+++.++.++++++||||++.
T Consensus 186 ~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~ 218 (269)
T COG0647 186 TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLD 218 (269)
T ss_pred cccCCCCHHHHHHHHHHhCCCcccEEEEcCCch
Confidence 456899999999999999999999999999974
No 113
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.85 E-value=5.8e-09 Score=72.38 Aligned_cols=77 Identities=14% Similarity=0.213 Sum_probs=54.1
Q ss_pred CCCChhHHHHHHhhccCcE---EEec-CChHHHHHHHhhcCCC----------cccceeeecccCCCCCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTN-SDRNHAITCLKRLEIA----------DCFDQIICFETMNPNLSKATRPDEFPV 154 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~-~~~~~~~~~l~~~~l~----------~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (191)
+.++|++.++|..|+++|+ ++|- ...+.++..|+.+++. .+|+..-...
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~----------------- 106 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP----------------- 106 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS-----------------
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec-----------------
Confidence 7899999999999999998 7774 3467899999999998 6666633322
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCcc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~ 184 (191)
-+|..-++.+.++.|++++++++|.|-.
T Consensus 107 --gsK~~Hf~~i~~~tgI~y~eMlFFDDe~ 134 (169)
T PF12689_consen 107 --GSKTTHFRRIHRKTGIPYEEMLFFDDES 134 (169)
T ss_dssp --S-HHHHHHHHHHHH---GGGEEEEES-H
T ss_pred --CchHHHHHHHHHhcCCChhHEEEecCch
Confidence 3557899999999999999999999964
No 114
>PRK10976 putative hydrolase; Provisional
Probab=98.84 E-value=7.4e-09 Score=77.71 Aligned_cols=32 Identities=3% Similarity=-0.173 Sum_probs=29.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.+|++++++++|||+.||.
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi 219 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDA 219 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccH
Confidence 45578999999999999999999999999994
No 115
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.82 E-value=6e-09 Score=73.88 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=57.9
Q ss_pred HHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 029593 97 NLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173 (191)
Q Consensus 97 ~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 173 (191)
..+..|+++|+ ++||.+...++..++.+++..+|+ + .++++..+..+++++|++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g---------------~~~k~~~l~~~~~~~gl~ 111 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G---------------QSNKLIAFSDLLEKLAIA 111 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------CCcHHHHHHHHHHHhCCC
Confidence 35666777876 999999999999999999876664 1 266789999999999999
Q ss_pred CCceEEecCccccc
Q 029593 174 PRHAVRQSSFLIFY 187 (191)
Q Consensus 174 p~~~i~iGDs~~~~ 187 (191)
|++|++|||+.||.
T Consensus 112 ~~ev~~VGDs~~D~ 125 (183)
T PRK09484 112 PEQVAYIGDDLIDW 125 (183)
T ss_pred HHHEEEECCCHHHH
Confidence 99999999999985
No 116
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.81 E-value=9.8e-09 Score=77.30 Aligned_cols=32 Identities=3% Similarity=-0.256 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHcCC---CCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANV---DPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~---~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.+|+ +++++++||||.||.
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi 219 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDA 219 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHH
Confidence 46679999999999999 999999999999994
No 117
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.74 E-value=1.3e-09 Score=76.48 Aligned_cols=33 Identities=36% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+.+||++..|+.+++.+|++|++++||||..||
T Consensus 178 vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~d 210 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALGVDPEEAVMIGDDLND 210 (262)
T ss_pred EecCCCHHHHHHHHHhcCCChHHheEEcccccc
Confidence 347999999999999999999999999999987
No 118
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.74 E-value=8.6e-09 Score=71.29 Aligned_cols=80 Identities=20% Similarity=0.165 Sum_probs=52.3
Q ss_pred CChhHHHHHHhhccCcE---EEecCC---h-----------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSD---R-----------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~---~-----------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (191)
..|++.+.|..|++.|+ |+||.. . ..+..+++.+++. +. ++.+....
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~-~~~a~~~d------------- 93 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQ-VYAAPHKD------------- 93 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EE-EEECGCSS-------------
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eE-EEecCCCC-------------
Confidence 34579999999999997 888842 1 2344455566654 22 23322221
Q ss_pred CCCCCCHHHHHHHHHHcCC----CCCceEEecCcccc
Q 029593 154 VLLKPSMDAMKLALHVANV----DPRHAVRQSSFLIF 186 (191)
Q Consensus 154 ~~~kp~~~~~~~~~~~~~~----~p~~~i~iGDs~~~ 186 (191)
...||.+.|+..+++.++. +.++++||||+..+
T Consensus 94 ~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 94 PCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp TTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred CCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence 2369999999999999874 88999999998443
No 119
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.74 E-value=3.6e-08 Score=72.70 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=29.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCce-EEecCcc-ccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHA-VRQSSFL-IFY 187 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~-i~iGDs~-~~~ 187 (191)
.+||++.+++.++++++++++++ +||||++ +|.
T Consensus 186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 46999999999999999999887 9999998 563
No 120
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.73 E-value=5.5e-09 Score=77.35 Aligned_cols=83 Identities=18% Similarity=0.108 Sum_probs=65.8
Q ss_pred CChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCccccee--eecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 91 PDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQI--ICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i--~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
-++++.+++..|+++|+ ++||.+.......+..++...++..+ .+.+... .+||+|.+++.+
T Consensus 139 ~~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~--------------~gKP~~~~~~~~ 204 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIY--------------SGKPYPAIFHKA 204 (242)
T ss_pred CHHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEec--------------CCCCCHHHHHHH
Confidence 36899999999888886 88999888776667777777777755 4444332 369999999999
Q ss_pred HHHcCCC-CCceEEecCcc-ccc
Q 029593 167 LHVANVD-PRHAVRQSSFL-IFY 187 (191)
Q Consensus 167 ~~~~~~~-p~~~i~iGDs~-~~~ 187 (191)
+++++.. +++|+||||++ +|.
T Consensus 205 ~~~~~~~~~~~~~~vGD~~~~Di 227 (242)
T TIGR01459 205 LKECSNIPKNRMLMVGDSFYTDI 227 (242)
T ss_pred HHHcCCCCcccEEEECCCcHHHH
Confidence 9999975 67999999994 664
No 121
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.72 E-value=1e-08 Score=66.67 Aligned_cols=78 Identities=18% Similarity=0.256 Sum_probs=60.5
Q ss_pred CCCChhHHHHHHhhccCcEEEec---CChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH---HH
Q 029593 89 IKPDPQLRNLLCSITQRKIIFTN---SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM---DA 162 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~i~t~---~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~---~~ 162 (191)
..++|.+++++..++..|.|++. +....+-..++.+++..+|+.++. +|.| .|
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi---------------------ePhP~K~~M 98 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI---------------------EPHPYKFLM 98 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe---------------------cCCChhHHH
Confidence 67899999999999999984444 455667788899999999999988 5544 45
Q ss_pred HHHHHHHc------CCCCCceEEecCccccc
Q 029593 163 MKLALHVA------NVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~~~~~~~~------~~~p~~~i~iGDs~~~~ 187 (191)
+.+++..+ .++|+++++++|.-.++
T Consensus 99 L~~llr~i~~er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 99 LSQLLREINTERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred HHHHHHHHHHhhccccCcceEEEEecccccH
Confidence 55555443 47899999999986543
No 122
>PLN02887 hydrolase family protein
Probab=98.67 E-value=3.3e-08 Score=81.17 Aligned_cols=32 Identities=13% Similarity=-0.008 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.+|++++++++|||+.||.
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDI 536 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDI 536 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhH
Confidence 45678999999999999999999999999994
No 123
>PTZ00445 p36-lilke protein; Provisional
Probab=98.62 E-value=1e-07 Score=67.67 Aligned_cols=93 Identities=15% Similarity=0.051 Sum_probs=56.2
Q ss_pred CCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (191)
.+.|..+.++.+|++.|+ |+|=++. +.++..++..+.+.-+..+++.-..... ...-=.
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~---~p~~y~ 151 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQ---EPSDYR 151 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccC---Chhhhh
Confidence 355666666666666665 5554444 2455566655554444555442221110 000001
Q ss_pred CCCCCCCCHHH--H--HHHHHHcCCCCCceEEecCccc
Q 029593 152 FPVLLKPSMDA--M--KLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 152 ~~~~~kp~~~~--~--~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
....-||.|.. | +.+++++|+.|+++++|+|+..
T Consensus 152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~ 189 (219)
T PTZ00445 152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMN 189 (219)
T ss_pred hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHH
Confidence 12345999999 8 9999999999999999999865
No 124
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.60 E-value=8.4e-08 Score=71.60 Aligned_cols=32 Identities=3% Similarity=-0.144 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.++++++++++|||+.||.
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~ 217 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDI 217 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhH
Confidence 45679999999999999999999999999985
No 125
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.59 E-value=1.2e-06 Score=60.61 Aligned_cols=158 Identities=13% Similarity=0.082 Sum_probs=84.7
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcC--CCCCccchhhhhhcC
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALG--YDIGADDYHGFVHGR 83 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 83 (191)
-.|+-|+|||+.-.+.... +-+.+|.+... .+...+....-+....+..+. ...+.+++...+...
T Consensus 4 ~vi~sDFDGTITl~Ds~~~----------itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk~ 71 (220)
T COG4359 4 PVIFSDFDGTITLNDSNDY----------ITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLKD 71 (220)
T ss_pred eEEEecCCCceEecchhHH----------HHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 4788899999987654222 22344443221 222222222222222222211 122234444444432
Q ss_pred CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccccee--eeccc-CCC-CCCCCCC-CCCCCCC
Q 029593 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQI--ICFET-MNP-NLSKATR-PDEFPVL 155 (191)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i--~~~~~-~~~-~~~~~~~-~~~~~~~ 155 (191)
+.+.|+.+++++.++++++ |+|+|....+..++++++-..-++.+ ++-++ ... .++..-. -+.+..+
T Consensus 72 -----i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~ 146 (220)
T COG4359 72 -----IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGH 146 (220)
T ss_pred -----cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCC
Confidence 7899999999999999987 99999999999999987622222211 00000 000 0000000 0112223
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.|| +..+.+.-+++.++++|||..|
T Consensus 147 dK~------~vI~~l~e~~e~~fy~GDsvsD 171 (220)
T COG4359 147 DKS------SVIHELSEPNESIFYCGDSVSD 171 (220)
T ss_pred Ccc------hhHHHhhcCCceEEEecCCccc
Confidence 343 3455666778889999999876
No 126
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.56 E-value=2.1e-08 Score=74.16 Aligned_cols=31 Identities=13% Similarity=0.041 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
-.|..+++.+++.+|++++++++|||+.||.
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~ 215 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDI 215 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccH
Confidence 4568999999999999999999999999996
No 127
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.56 E-value=5.1e-07 Score=62.53 Aligned_cols=55 Identities=22% Similarity=0.217 Sum_probs=37.3
Q ss_pred cE-EEecCC-------hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-----
Q 029593 106 KI-IFTNSD-------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV----- 172 (191)
Q Consensus 106 g~-i~t~~~-------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~----- 172 (191)
++ |+||+. ...++.+.+.+|+. .+.... .|| ..+..+++.++.
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~~------------------kKP--~~~~~i~~~~~~~~~~~ 134 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHRA------------------KKP--GCFREILKYFKCQKVVT 134 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeCC------------------CCC--ccHHHHHHHHhhccCCC
Confidence 35 999973 56677777887762 221111 277 666777777754
Q ss_pred CCCceEEecCcc
Q 029593 173 DPRHAVRQSSFL 184 (191)
Q Consensus 173 ~p~~~i~iGDs~ 184 (191)
.|+++++|||.+
T Consensus 135 ~p~eiavIGDrl 146 (168)
T PF09419_consen 135 SPSEIAVIGDRL 146 (168)
T ss_pred CchhEEEEcchH
Confidence 499999999975
No 128
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.54 E-value=2.6e-07 Score=68.15 Aligned_cols=32 Identities=3% Similarity=-0.304 Sum_probs=30.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.+|+.+++.++++++++++++++|||+.||.
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~ 188 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDE 188 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHH
Confidence 57889999999999999999999999999985
No 129
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.53 E-value=7.5e-07 Score=66.26 Aligned_cols=32 Identities=9% Similarity=-0.042 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.+|+.+++.+++.+++++++|++|||+.||.
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~ 196 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDI 196 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHH
Confidence 58889999999999999999999999999985
No 130
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.45 E-value=1.4e-07 Score=65.56 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=69.1
Q ss_pred CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
....||+.++|+.|++. .+ |.|++.+.+++.+++.++... +|+.+++.+.... .+|+ +.+
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~--------------~~~~---~~K 103 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF--------------TNGK---YVK 103 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE--------------eCCC---EEe
Confidence 57889999999999886 33 999999999999999999876 8888888765433 2444 667
Q ss_pred HHHHcCCCCCceEEecCcccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFYF 188 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~~ 188 (191)
.++.+|.++++|++|||++.++-
T Consensus 104 ~L~~l~~~~~~vIiVDD~~~~~~ 126 (162)
T TIGR02251 104 DLSLVGKDLSKVIIIDNSPYSYS 126 (162)
T ss_pred EchhcCCChhhEEEEeCChhhhc
Confidence 78889999999999999998763
No 131
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.40 E-value=4.9e-07 Score=66.21 Aligned_cols=31 Identities=13% Similarity=0.015 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHcCC--CCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANV--DPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~--~p~~~i~iGDs~~~~ 187 (191)
-.|+.+++.+++.+++ +++++++|||+.||-
T Consensus 180 ~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~ 212 (225)
T TIGR02461 180 SDKGKAIKRLLDLYKLRPGAIESVGLGDSENDF 212 (225)
T ss_pred CCHHHHHHHHHHHhccccCcccEEEEcCCHHHH
Confidence 4457888999998876 777999999999984
No 132
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=98.40 E-value=2.4e-07 Score=55.84 Aligned_cols=32 Identities=28% Similarity=0.186 Sum_probs=29.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCc-ccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSF-LIF 186 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs-~~~ 186 (191)
.+||+|.++..+++.++++|++++||||+ ..|
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~D 34 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETD 34 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhH
Confidence 46999999999999999999999999999 554
No 133
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.38 E-value=7.9e-06 Score=59.52 Aligned_cols=41 Identities=12% Similarity=0.076 Sum_probs=33.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCCCcc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADC 129 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l~~~ 129 (191)
.++.|++.+++..++++|+ ++|+.+... +...|...|+..+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 5899999999999999997 888887655 6677778887655
No 134
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.37 E-value=1.4e-06 Score=63.86 Aligned_cols=87 Identities=10% Similarity=0.004 Sum_probs=55.1
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
.+..|++.++++.++++|+ ++||.+. +....-|+..|...+-..+.-....... ... ..-|..-
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~--------~~~--~~yK~~~ 183 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK--------KSA--VEYKSER 183 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS----------------SHHH
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc--------ccc--cccchHH
Confidence 3788999999999999998 8888654 4566667888876554444444332110 000 0113455
Q ss_pred HHHHHHH-cCCCCCceEEecCccccccc
Q 029593 163 MKLALHV-ANVDPRHAVRQSSFLIFYFD 189 (191)
Q Consensus 163 ~~~~~~~-~~~~p~~~i~iGDs~~~~~~ 189 (191)
...+.++ +.+ ++.|||.++|+-+
T Consensus 184 r~~i~~~Gy~I----i~~iGD~~~D~~~ 207 (229)
T PF03767_consen 184 RKEIEKKGYRI----IANIGDQLSDFSG 207 (229)
T ss_dssp HHHHHHTTEEE----EEEEESSGGGCHC
T ss_pred HHHHHHcCCcE----EEEeCCCHHHhhc
Confidence 5555555 444 8889999999854
No 135
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.36 E-value=5.7e-07 Score=74.35 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=58.8
Q ss_pred CCCChhHHHHHHhhccCc-E---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g-~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.++++.|+++| + ++||.+...++..++++|+..+|..+. +++++..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~~~v~ 441 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------------PEDKLAIVK 441 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------------HHHHHHHHH
Confidence 478999999999999999 6 999999999999999999977665431 133444444
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
. ++..+++|+||||+.||-
T Consensus 442 ~----l~~~~~~v~~vGDg~nD~ 460 (556)
T TIGR01525 442 E----LQEEGGVVAMVGDGINDA 460 (556)
T ss_pred H----HHHcCCEEEEEECChhHH
Confidence 4 444678999999999984
No 136
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.34 E-value=5.7e-07 Score=67.19 Aligned_cols=32 Identities=9% Similarity=-0.219 Sum_probs=29.3
Q ss_pred CCCCHHHHHHHHHHcCCC--CCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVD--PRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~--p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++.++++ ++++++|||+.||.
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~ 207 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDL 207 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhH
Confidence 466789999999999999 99999999999995
No 137
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=98.31 E-value=4.5e-06 Score=60.29 Aligned_cols=125 Identities=14% Similarity=0.156 Sum_probs=82.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcC
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR 83 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (191)
+.++|+.|+|-|++|..+.- .+. +.... ...++.+..++..
T Consensus 78 K~~aVvlDlDETvLdNs~Yq--gy~------v~nnk------------------------------~f~pe~Wd~wV~a- 118 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQ--GYQ------VLNNK------------------------------GFTPETWDKWVQA- 118 (274)
T ss_pred CCceEEEecchHhhcCcccc--chh------hhcCC------------------------------CCCccchHHHHhh-
Confidence 34599999999999987421 122 22222 3344555555544
Q ss_pred CCCCCCCCChhHHHHHHhhccCcE---EEecCChHH----HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNH----AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (191)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~----~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (191)
....+.||+.++++...++|. .+||...+. ...-|++.|+...-...+-.... .
T Consensus 119 ---~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~----------------~ 179 (274)
T COG2503 119 ---KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD----------------K 179 (274)
T ss_pred ---cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC----------------C
Confidence 236899999999999999986 788876654 44556777887654442222211 3
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCcccccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDF 190 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~~~~ 190 (191)
||+..-++.+-+ .-.=|+.|||+++||=|.
T Consensus 180 k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 180 KSKEVRRQAVEK----DYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred CcHHHHHHHHhh----ccceeeEecCchhhhcch
Confidence 777777776666 345578999999998654
No 138
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.26 E-value=3.6e-06 Score=63.16 Aligned_cols=31 Identities=19% Similarity=0.108 Sum_probs=25.2
Q ss_pred CCCHHHHHHHHHHcCCC--CCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVD--PRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~--p~~~i~iGDs~~~~ 187 (191)
-+|..+++.+.+.++-. +-.++.+|||+||.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~ 239 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDL 239 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhH
Confidence 46688888888887654 55999999999994
No 139
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.23 E-value=2e-06 Score=71.18 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=56.8
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
..++|++.++++.|+++|+ ++|+.+...++...+.+|+. ++. +. . +++|+..++.
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~-~~-~---------------p~~K~~~v~~ 461 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRA-EV-L---------------PDDKAALIKE 461 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEc-cC-C---------------hHHHHHHHHH
Confidence 4688999999999999987 99999999999999999994 221 11 1 2445555555
Q ss_pred HHHHcCCCCCceEEecCccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+. .++++|+||||+.||.
T Consensus 462 l~----~~~~~v~~VGDg~nD~ 479 (562)
T TIGR01511 462 LQ----EKGRVVAMVGDGINDA 479 (562)
T ss_pred HH----HcCCEEEEEeCCCccH
Confidence 44 3679999999999994
No 140
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.18 E-value=2.5e-06 Score=70.27 Aligned_cols=74 Identities=11% Similarity=0.128 Sum_probs=58.4
Q ss_pred CCCChhHHHHHHhhccCcE----EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
..++|++.++++.|+++|+ ++||.+...++..++++|+..+|..+. ++++..
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~~--- 416 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------------------PEDKLE--- 416 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------------------cHHHHH---
Confidence 4788999999999999876 999999999999999999977664321 133444
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++++++..+++++||||+.||.
T Consensus 417 -~i~~l~~~~~~v~~vGDg~nD~ 438 (536)
T TIGR01512 417 -IVKELREKYGPVAMVGDGINDA 438 (536)
T ss_pred -HHHHHHhcCCEEEEEeCCHHHH
Confidence 4444555568999999999984
No 141
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.15 E-value=8.2e-06 Score=66.19 Aligned_cols=88 Identities=14% Similarity=0.010 Sum_probs=46.6
Q ss_pred CChhHHHHHHhhccCcEEEecCChHHHHHHHhh-cCCCcccceeeecccC--CCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 029593 91 PDPQLRNLLCSITQRKIIFTNSDRNHAITCLKR-LEIADCFDQIICFETM--NPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~--~~~~~~~~~~~~~~~~~kp~~~~~~~~~ 167 (191)
+.+.+.+.+....+. +++|.+....++.+.+. +|++. +++.+-. ..+.+++.+.......+.-|.. .+.
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~---rl~ 182 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VLGTELEVSKSGRATGFMKKPGVLVGDHKRD---AVL 182 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EEecccEECcCCEEeeeecCCCCCccHHHHH---HHH
Confidence 556666555442222 48998899999999975 78843 3333311 0112222211111122222333 333
Q ss_pred HHcCCCCCceEEecCccccc
Q 029593 168 HVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 168 ~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.++.+... ++.|||.+|.
T Consensus 183 ~~~g~~~~~-~aYgDS~sD~ 201 (497)
T PLN02177 183 KEFGDALPD-LGLGDRETDH 201 (497)
T ss_pred HHhCCCCce-EEEECCccHH
Confidence 556644334 8999999974
No 142
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.15 E-value=6.2e-05 Score=55.96 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=31.8
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChH---HHHHHHhhcCCCcc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADC 129 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l~~~~l~~~ 129 (191)
.++.|++.++++.++++|+ ++|+.+.. ....-|+..|...+
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~ 190 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW 190 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence 6889999999999999997 88887753 34555666777654
No 143
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.09 E-value=1.1e-05 Score=66.98 Aligned_cols=32 Identities=9% Similarity=-0.098 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEe--cCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQ--SSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~i--GDs~~~~ 187 (191)
+-.|..+++.+++.++++.+++++| |||.||.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDi 644 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDY 644 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhH
Confidence 3566899999999999999999999 9999995
No 144
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.02 E-value=1.2e-05 Score=70.04 Aligned_cols=98 Identities=10% Similarity=0.107 Sum_probs=69.9
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC--CCCCCCCCCCCCCCCHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~ 164 (191)
+++|++.++++.|+++|+ ++|+.+...+..+.+.+|+...++.++++++.....- .........+...+.|+--.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 788999999999999998 9999999999999999999876666655544321000 00000001122345666667
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.+.+.++-..+.|+|+||+.||-
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~ 630 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDA 630 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccH
Confidence 77777777779999999999994
No 145
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.02 E-value=5.2e-05 Score=57.02 Aligned_cols=31 Identities=16% Similarity=-0.045 Sum_probs=28.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+-.|..+++++++.+++..+++++|||+.||
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD 202 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTD 202 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccH
Confidence 3567899999999999999999999999998
No 146
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.01 E-value=5.8e-06 Score=55.80 Aligned_cols=67 Identities=19% Similarity=0.121 Sum_probs=55.7
Q ss_pred HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (191)
Q Consensus 98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p 174 (191)
-+..|.+.|+ |+|+.+...++...+.+|+.. ++-+. +.+-..+..+++++++.|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~----~~qG~-------------------~dK~~a~~~L~~~~~l~~ 99 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH----LYQGI-------------------SDKLAAFEELLKKLNLDP 99 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce----eeech-------------------HhHHHHHHHHHHHhCCCH
Confidence 3556677777 999999999999999999943 44332 455799999999999999
Q ss_pred CceEEecCccccc
Q 029593 175 RHAVRQSSFLIFY 187 (191)
Q Consensus 175 ~~~i~iGDs~~~~ 187 (191)
++|.+|||-+||-
T Consensus 100 e~~ayiGDD~~Dl 112 (170)
T COG1778 100 EEVAYVGDDLVDL 112 (170)
T ss_pred HHhhhhcCccccH
Confidence 9999999999983
No 147
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.98 E-value=7.2e-05 Score=55.56 Aligned_cols=101 Identities=19% Similarity=0.290 Sum_probs=68.0
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC----------CC-------C
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA----------TR-------P 149 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~----------~~-------~ 149 (191)
.+.|.+.+.|.+|++.|- +=|.|+++++...++.+++.++||.++++.......... .+ .
T Consensus 142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 345777888999999984 789999999999999999999999988755332211111 00 0
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCceE-EecCcc--ccccccC
Q 029593 150 DEFPVLLKPSMDAMKLALHVANVDPRHAV-RQSSFL--IFYFDFF 191 (191)
Q Consensus 150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i-~iGDs~--~~~~~~~ 191 (191)
.....+||. |.....-+++.|+..=+++ .|+|=. |+-||||
T Consensus 222 ~~~~~LPKS-PrVVL~yL~k~gvny~KtiTLVDDL~~Nn~~YD~F 265 (297)
T PF05152_consen 222 TNVNNLPKS-PRVVLWYLRKKGVNYFKTITLVDDLKSNNYSYDYF 265 (297)
T ss_pred CcCCCCCCC-CeehHHHHHHcCCceeeeEEEeccCcccCccceeE
Confidence 111225554 7888899999999875554 455533 3345554
No 148
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.96 E-value=3.2e-05 Score=57.52 Aligned_cols=31 Identities=6% Similarity=-0.011 Sum_probs=26.1
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
-.|..+++++++++++++++++++|||.||.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~ 194 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDL 194 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcH
Confidence 3468999999999999999999999999995
No 149
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.81 E-value=0.00021 Score=49.37 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=24.8
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHH---HHHHhh
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKR 123 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~---~~~l~~ 123 (191)
..|++.+++.+++++|+ ++|+.+.... +.+++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 35899999999999987 7777766554 356655
No 150
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.81 E-value=0.00048 Score=51.33 Aligned_cols=30 Identities=13% Similarity=0.062 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
+-+++.++..++.+.|..|+.+|+|+|+..
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~ 189 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKE 189 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence 355789999999999999999999999864
No 151
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.80 E-value=6.5e-05 Score=65.19 Aligned_cols=74 Identities=11% Similarity=-0.000 Sum_probs=58.2
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
-+++|++.+.++.|++.|+ ++|+.+...++.+.+.+|+..++..+ . |..-..
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-----------------------~--p~~K~~ 703 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-----------------------L--PDGKAE 703 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC-----------------------C--HHHHHH
Confidence 3678999999999999987 99998899999999999996544321 1 122334
Q ss_pred HHHHcCCCCCceEEecCccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++++++.++++++||||+.||-
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~ 725 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDA 725 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHH
Confidence 6666677789999999999984
No 152
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.79 E-value=7.7e-05 Score=59.17 Aligned_cols=81 Identities=11% Similarity=0.152 Sum_probs=60.0
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
..++....+.+..|+++|+ |+|-++...++++.+.. -|.+..-++... .+..+.|+.+-+++
T Consensus 254 G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh-----p~MiLkeedfa~----------~~iNW~~K~eNirk 318 (574)
T COG3882 254 GEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH-----PDMILKEEDFAV----------FQINWDPKAENIRK 318 (574)
T ss_pred chhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC-----CCeEeeHhhhhh----------heecCCcchhhHHH
Confidence 3555666788999999998 66666666777776653 244444443321 33446999999999
Q ss_pred HHHHcCCCCCceEEecCcc
Q 029593 166 ALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~ 184 (191)
+++++++..+..++++|++
T Consensus 319 IAkklNlg~dSmvFiDD~p 337 (574)
T COG3882 319 IAKKLNLGLDSMVFIDDNP 337 (574)
T ss_pred HHHHhCCCccceEEecCCH
Confidence 9999999999999999986
No 153
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.73 E-value=4.8e-06 Score=64.26 Aligned_cols=21 Identities=33% Similarity=0.572 Sum_probs=17.3
Q ss_pred EEEEecCCCCCCChHHHHHHH
Q 029593 7 CLVFDLDDTLYPSETGIAAAV 27 (191)
Q Consensus 7 ~iifD~DGTL~~~~~~~~~~~ 27 (191)
+++||+||||++++..+..+.
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~ 22 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGAS 22 (321)
T ss_pred EEEEeCcCceECCccccHHHH
Confidence 689999999999998765443
No 154
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.69 E-value=8.4e-05 Score=62.74 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=54.8
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
.+.|++++.+.+|++.|+ ++|+-++..++.+.+.+|++.++..+.. .-|.+.++
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP---------------------edK~~~V~-- 593 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP---------------------EDKAEIVR-- 593 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc---------------------HHHHHHHH--
Confidence 788999999999999998 8998889999999999999544332221 22234444
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
+++-.-..++||||+.||
T Consensus 594 --~l~~~g~~VamVGDGIND 611 (713)
T COG2217 594 --ELQAEGRKVAMVGDGIND 611 (713)
T ss_pred --HHHhcCCEEEEEeCCchh
Confidence 444444789999999998
No 155
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.67 E-value=2.1e-05 Score=56.15 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=19.6
Q ss_pred CCCCCCChhHHHHHHhhccCc--E-EEecCCh
Q 029593 86 YDLIKPDPQLRNLLCSITQRK--I-IFTNSDR 114 (191)
Q Consensus 86 ~~~~~~~~~~~~~l~~l~~~g--~-i~t~~~~ 114 (191)
....+|.||+.++++.|.+.| . ++|..+.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 445799999999999999997 3 6666543
No 156
>PTZ00174 phosphomannomutase; Provisional
Probab=97.67 E-value=3.4e-05 Score=57.37 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=27.7
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEG 33 (191)
Q Consensus 1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~ 33 (191)
|.|++|+|++|+||||++++..+.....+++.+
T Consensus 1 ~~~~~klia~DlDGTLL~~~~~is~~~~~ai~~ 33 (247)
T PTZ00174 1 MEMKKTILLFDVDGTLTKPRNPITQEMKDTLAK 33 (247)
T ss_pred CCCCCeEEEEECcCCCcCCCCCCCHHHHHHHHH
Confidence 678899999999999999987676666776666
No 157
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.58 E-value=0.00014 Score=50.16 Aligned_cols=78 Identities=21% Similarity=0.184 Sum_probs=58.6
Q ss_pred CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCC-ccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIA-DCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~-~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
+.++||+.++|+.|++. .+ |+|++.+.++..+++.++.. .+| +.+++.++... ...|
T Consensus 57 v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~------------~~~K------- 117 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGS------------PHTK------- 117 (156)
T ss_pred EEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCC------------Cccc-------
Confidence 68899999999999865 23 99999999999999999988 478 56676654221 0012
Q ss_pred HHHHHcCCCCCceEEecCccc
Q 029593 165 LALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~ 185 (191)
.+-..++.+.+.+++|+|++.
T Consensus 118 dL~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 118 SLLRLFPADESMVVIIDDRED 138 (156)
T ss_pred cHHHHcCCCcccEEEEeCCHH
Confidence 122345778899999999985
No 158
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.53 E-value=0.00029 Score=59.38 Aligned_cols=72 Identities=10% Similarity=-0.063 Sum_probs=55.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
++.|++++.+++|++.|+ ++|+-+...+..+.+.+|+.++| ... + |+--..+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~----A~~-------------------~--PedK~~i 495 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFV----AEC-------------------K--PEDKINV 495 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEE----cCC-------------------C--HHHHHHH
Confidence 788999999999999998 89988899999999999996532 211 2 3334444
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+.++-.-+.|.|+||+.||
T Consensus 496 V~~lQ~~G~~VaMtGDGvND 515 (673)
T PRK14010 496 IREEQAKGHIVAMTGDGTND 515 (673)
T ss_pred HHHHHhCCCEEEEECCChhh
Confidence 44445455779999999998
No 159
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.48 E-value=0.00036 Score=58.88 Aligned_cols=72 Identities=8% Similarity=0.052 Sum_probs=54.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
++.|++++.++.|++.|+ ++|+-+...++.+.+.+|++++ +... . |+--..+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A~~-------------------~--PedK~~i 499 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LAEA-------------------T--PEDKLAL 499 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----EccC-------------------C--HHHHHHH
Confidence 678999999999999998 8898889999999999999542 2211 2 3333344
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+.++-.-+-|.|+||+.||
T Consensus 500 V~~lQ~~G~~VaMtGDGvND 519 (679)
T PRK01122 500 IRQEQAEGRLVAMTGDGTND 519 (679)
T ss_pred HHHHHHcCCeEEEECCCcch
Confidence 44444445679999999998
No 160
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.45 E-value=0.00042 Score=59.38 Aligned_cols=71 Identities=11% Similarity=0.015 Sum_probs=53.2
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
+++|++.+.++.|++.|+ ++|+.+...++.+.+.+|+..++. .. +.-|+..++.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~~----------------p~~K~~~v~~- 624 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------LL----------------PEDKVKAVTE- 624 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------CC----------------HHHHHHHHHH-
Confidence 788999999999999998 999999999999999999952211 10 1123444444
Q ss_pred HHHcCCCCCceEEecCccccc
Q 029593 167 LHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~~ 187 (191)
++ .+.+|+||||+.||-
T Consensus 625 ---l~-~~~~v~mvGDgiNDa 641 (741)
T PRK11033 625 ---LN-QHAPLAMVGDGINDA 641 (741)
T ss_pred ---Hh-cCCCEEEEECCHHhH
Confidence 33 346899999999983
No 161
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.44 E-value=0.00038 Score=58.63 Aligned_cols=73 Identities=7% Similarity=0.026 Sum_probs=54.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
++.|++++.++.|++.|+ ++|+.+...++.+.+.+|+++++ ... . +.-|...++..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~~--~---------------PedK~~~v~~l 504 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AEA--T---------------PEDKIALIRQE 504 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cCC--C---------------HHHHHHHHHHH
Confidence 788999999999999998 99999999999999999996533 211 0 12234444444
Q ss_pred HHHcCCCCCceEEecCccccc
Q 029593 167 LHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.+ ....+.|+||+.||-
T Consensus 505 q~----~g~~VamvGDG~NDa 521 (675)
T TIGR01497 505 QA----EGKLVAMTGDGTNDA 521 (675)
T ss_pred HH----cCCeEEEECCCcchH
Confidence 33 345799999999983
No 162
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.37 E-value=0.00062 Score=59.76 Aligned_cols=98 Identities=7% Similarity=-0.015 Sum_probs=60.9
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc----ceeeecccCCCCC--CCCCCCCCCCCCCCCCH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF----DQIICFETMNPNL--SKATRPDEFPVLLKPSM 160 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~~~~--~~~~~~~~~~~~~kp~~ 160 (191)
++.+++.+.++.|+++|+ ++|+.+...+..+.+.+|+...- ...+++.....-. -.........+-..-.|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 688999999999999998 88888888999999999985311 1122221110000 00000000011123334
Q ss_pred HHHHHHHHHcCCCCCceEEecCccccc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.--..+.+.++-..+.|.|+||+.||-
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~ 643 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDA 643 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchH
Confidence 555666667776778999999999984
No 163
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.25 E-value=0.00085 Score=57.21 Aligned_cols=72 Identities=10% Similarity=0.091 Sum_probs=54.8
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
++.|++...+..|++.|+ ++|+-+...++.+.++.|+ +.+++-- . +.-|.+.++.+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi----~~V~aev-~----------------P~~K~~~Ik~l 781 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI----DNVYAEV-L----------------PEQKAEKIKEI 781 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc----ceEEecc-C----------------chhhHHHHHHH
Confidence 788999999999999998 9999999999999999994 5555521 1 12234455544
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+ ....++||||+.||
T Consensus 782 q~----~~~~VaMVGDGIND 797 (951)
T KOG0207|consen 782 QK----NGGPVAMVGDGIND 797 (951)
T ss_pred Hh----cCCcEEEEeCCCCc
Confidence 44 34789999999998
No 164
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.21 E-value=0.00049 Score=59.17 Aligned_cols=94 Identities=6% Similarity=-0.027 Sum_probs=58.7
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC--------CCCCCCCCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR--------PDEFPVLLKP 158 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~--------~~~~~~~~kp 158 (191)
++.|++.++++.|+++|+ ++|+-+...++.+.+.+|+... +++++....+...... .....+..+-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 788999999999999998 8999899999999999999641 2222111100000000 0000011122
Q ss_pred CHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 159 SMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.|+--..+.+.++-.-+.|.|+||+.||
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvND 546 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVND 546 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCccc
Confidence 3444455555555556789999999998
No 165
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.21 E-value=0.0018 Score=42.67 Aligned_cols=76 Identities=5% Similarity=-0.046 Sum_probs=58.1
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~ 164 (191)
.-++++.+.+.+..|++. + +.|+-....+....+..|+. .+.++.. .++.+-.
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~---------------------a~~e~K~ 83 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFAG---------------------ADPEMKA 83 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeecc---------------------cCHHHHH
Confidence 368899999999999987 5 66655556677777777763 3445543 2357788
Q ss_pred HHHHHcCCCCCceEEecCccccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.++..++-+-+.|+||||+.||-
T Consensus 84 ~ii~eLkk~~~k~vmVGnGaND~ 106 (152)
T COG4087 84 KIIRELKKRYEKVVMVGNGANDI 106 (152)
T ss_pred HHHHHhcCCCcEEEEecCCcchH
Confidence 88888888889999999999984
No 166
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.16 E-value=0.00077 Score=54.15 Aligned_cols=97 Identities=18% Similarity=0.123 Sum_probs=55.9
Q ss_pred CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---------CCCcccceeeecccCCCCCCCC--------
Q 029593 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---------EIADCFDQIICFETMNPNLSKA-------- 146 (191)
Q Consensus 87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---------~l~~~f~~i~~~~~~~~~~~~~-------- 146 (191)
..+...|.+..+|+.|+++|. ++||++..++...+..+ ...++||.|+....... =|+.
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~-FF~~~~pfr~vd 258 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPG-FFTEGRPFREVD 258 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCH-HHCT---EEEEE
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCc-ccCCCCceEEEE
Confidence 345667899999999999994 99999999999988875 24467999876432100 0000
Q ss_pred --CCCCC----CCCCCCC---CHHHHHHHHHHcCCCCCceEEecCcc
Q 029593 147 --TRPDE----FPVLLKP---SMDAMKLALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 147 --~~~~~----~~~~~kp---~~~~~~~~~~~~~~~p~~~i~iGDs~ 184 (191)
+.... .....+. ...-...+.+.+|....+|++|||++
T Consensus 259 ~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi 305 (448)
T PF05761_consen 259 TETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHI 305 (448)
T ss_dssp TTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESST
T ss_pred CCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCch
Confidence 00000 0001111 12446677788899999999999986
No 167
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.07 E-value=0.0015 Score=57.31 Aligned_cols=93 Identities=5% Similarity=0.004 Sum_probs=60.0
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC----CCCCCCCCCCCCCHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA----TRPDEFPVLLKPSMDA 162 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~----~~~~~~~~~~kp~~~~ 162 (191)
++.|++.++++.|+++|+ ++|+-+...+..+.+.+|+.. +.++++.+...- +. .......+...-.|+-
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l--~~~el~~~~~~~~VfAr~sPe~ 625 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL--SDDELANLAERTTLFARLTPMH 625 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC--CHHHHHHHHhhCcEEEEcCHHH
Confidence 678999999999999998 899988999999999999952 233333322110 00 0000001112233455
Q ss_pred HHHHHHHcCCCCCceEEecCcccc
Q 029593 163 MKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 163 ~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
-..+.+.++-.-+.|.|+|||.||
T Consensus 626 K~~IV~~Lq~~G~vVam~GDGvND 649 (902)
T PRK10517 626 KERIVTLLKREGHVVGFMGDGIND 649 (902)
T ss_pred HHHHHHHHHHCCCEEEEECCCcch
Confidence 555555555556789999999998
No 168
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.03 E-value=0.0015 Score=57.28 Aligned_cols=94 Identities=6% Similarity=0.011 Sum_probs=60.2
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC---CCCCCCCCCCCCCCCCCHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN---LSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---~~~~~~~~~~~~~~kp~~~~~ 163 (191)
++.|++.++++.|+++|+ ++|+-+...+..+.+.+|+.. +.++++.+...- ... .......+...-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~-~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALA-REVEERTVFAKLTPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHH-HHhhhCCEEEEeCHHHH
Confidence 778999999999999998 889888899999999999952 223332222110 000 00000011123345555
Q ss_pred HHHHHHcCCCCCceEEecCcccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
..+.+.++-.-+-|.|+|||.||
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvND 649 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGIND 649 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchh
Confidence 55556555556789999999998
No 169
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.03 E-value=0.002 Score=56.28 Aligned_cols=94 Identities=4% Similarity=0.014 Sum_probs=57.7
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC---CCCCCCCCCCCCCCCCCHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN---LSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---~~~~~~~~~~~~~~kp~~~~~ 163 (191)
++.|++.+.++.|+++|+ ++|+-+...+..+.+.+|+.. +.++++.+.... .+.. ......+...-.|+--
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~-~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELAR-ELRKYHIFARLTPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHH-HhhhCeEEEECCHHHH
Confidence 778999999999999998 899888889999999999952 223332221100 0000 0000001112233444
Q ss_pred HHHHHHcCCCCCceEEecCcccc
Q 029593 164 KLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
..+.+.++-.-+.|.|+||+.||
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvND 614 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGIND 614 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCccc
Confidence 44444444445689999999998
No 170
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.01 E-value=0.014 Score=42.29 Aligned_cols=79 Identities=9% Similarity=0.056 Sum_probs=58.0
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcC---CCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE---IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~---l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 163 (191)
..++++..++++++..|+ |.|+++...++-....-+ +..+++..+.. ..+. |-....|
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG~---------------K~e~~sy 186 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIGL---------------KVESQSY 186 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-cccc---------------eehhHHH
Confidence 688999999999999987 888888776665554432 22233333332 2222 7778999
Q ss_pred HHHHHHcCCCCCceEEecCcc
Q 029593 164 KLALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~iGDs~ 184 (191)
..+.+.++.+|.++++.-|-+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~ 207 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVP 207 (254)
T ss_pred HHHHHHhCCChhheEEeccCh
Confidence 999999999999999988864
No 171
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.98 E-value=0.0015 Score=57.66 Aligned_cols=97 Identities=10% Similarity=-0.042 Sum_probs=58.6
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC--CCCCCCCCCCCCCCCHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK 164 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~ 164 (191)
++.|++.++++.|+++|+ ++|+-+...+..+.+.+|+..--..++++++.....- ...+.....+...-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 788999999999999998 8898889999999999999642223333332111000 00000000011122234444
Q ss_pred HHHHHcCCCCCceEEecCcccc
Q 029593 165 LALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 165 ~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+.+.++-.-+.|.|+|||.||
T Consensus 659 ~iV~~lq~~g~vVam~GDGvND 680 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTND 680 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCch
Confidence 4444444445689999999998
No 172
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.94 E-value=0.0063 Score=43.85 Aligned_cols=28 Identities=7% Similarity=-0.181 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcC-CCCCc-eEEecCccccc
Q 029593 160 MDAMKLALHVAN-VDPRH-AVRQSSFLIFY 187 (191)
Q Consensus 160 ~~~~~~~~~~~~-~~p~~-~i~iGDs~~~~ 187 (191)
..+...+++.+. ..+.+ ++.+|||+||+
T Consensus 193 g~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~ 222 (274)
T COG3769 193 GQAANWLLETYRRLGGARTTLGLGDGPNDA 222 (274)
T ss_pred cHHHHHHHHHHHhcCceeEEEecCCCCCcc
Confidence 456666666554 44555 89999999996
No 173
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.74 E-value=0.0038 Score=55.66 Aligned_cols=97 Identities=7% Similarity=-0.060 Sum_probs=59.7
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc----------cceeeecccCCCCCC--CCCCCCCCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC----------FDQIICFETMNPNLS--KATRPDEFPV 154 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~----------f~~i~~~~~~~~~~~--~~~~~~~~~~ 154 (191)
++.|++.++++.|+++|+ ++|+.+...+..+.+.+|+..- -+.++++.......- .........+
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 788999999999999998 9999899999999999999532 112333332221000 0000000001
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
...-.|.--..+.+.++-.-+.|.|+|||.||
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvND 757 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVND 757 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCcch
Confidence 12223444444555554456789999999998
No 174
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.73 E-value=0.0042 Score=54.66 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=64.6
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccc--eeeecccCCCCCCC--CCCCCCCCCCCCCCHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSK--ATRPDEFPVLLKPSMD 161 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~~~--~~~~~~~~~~~kp~~~ 161 (191)
-+|.++++++++.|+++|+ ++|+-+...+..+.+.+|+..--. .++++.......-. .....+..+-..-.|.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 3789999999999999998 999989999999999999866543 35555543320000 0000011122223455
Q ss_pred HHHHHHHHcCCCCCceEEecCcccc
Q 029593 162 AMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
--.++.+.++-.-.-|.|+|||.||
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchh
Confidence 5555555555556789999999998
No 175
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.64 E-value=0.0014 Score=47.07 Aligned_cols=32 Identities=9% Similarity=-0.228 Sum_probs=30.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+.+|+.+++.++++++++++++++|||+.||.
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~ 192 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDE 192 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 57789999999999999999999999999985
No 176
>PLN02423 phosphomannomutase
Probab=96.61 E-value=0.0016 Score=48.44 Aligned_cols=31 Identities=16% Similarity=0.260 Sum_probs=23.5
Q ss_pred CceEEE-EecCCCCCCChHHHHHHHHHHHHHH
Q 029593 4 PFNCLV-FDLDDTLYPSETGIAAAVKRNIEGF 34 (191)
Q Consensus 4 ~~k~ii-fD~DGTL~~~~~~~~~~~~~~~~~~ 34 (191)
+++.++ ||+||||++++..+.....+++++.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l 36 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKEL 36 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence 567666 9999999998876766666666663
No 177
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.46 E-value=0.0028 Score=49.02 Aligned_cols=34 Identities=15% Similarity=-0.116 Sum_probs=27.8
Q ss_pred CCCCCCCHHHHHHHHHHc--------CC-----CCCceEEecCcc-cc
Q 029593 153 PVLLKPSMDAMKLALHVA--------NV-----DPRHAVRQSSFL-IF 186 (191)
Q Consensus 153 ~~~~kp~~~~~~~~~~~~--------~~-----~p~~~i~iGDs~-~~ 186 (191)
...|||++.+++.+++.+ ++ ++++++||||++ .|
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tD 276 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASD 276 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhh
Confidence 356899999999998887 43 457999999998 54
No 178
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.41 E-value=0.009 Score=50.95 Aligned_cols=97 Identities=8% Similarity=0.016 Sum_probs=63.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccc----eeeecccCCCCC--CCCCCCCCCCCCCCCCH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD----QIICFETMNPNL--SKATRPDEFPVLLKPSM 160 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~~~--~~~~~~~~~~~~~kp~~ 160 (191)
+|++++++.++.+++.|+ ++|+-+...++.+.++.|+...-+ ..++++....-. ....+.....+-..-.|
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 889999999999999998 899999999999999999865544 233333221100 00000001111111234
Q ss_pred HHHHHHHHHcCCCCCceEEecCcccc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.--.++.+.++-.-+=|.|-||+.||
T Consensus 664 ~HK~kIVeaLq~~geivAMTGDGVND 689 (972)
T KOG0202|consen 664 QHKLKIVEALQSRGEVVAMTGDGVND 689 (972)
T ss_pred hhHHHHHHHHHhcCCEEEecCCCccc
Confidence 55566666667677889999999998
No 179
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.28 E-value=0.025 Score=38.92 Aligned_cols=14 Identities=36% Similarity=0.534 Sum_probs=12.6
Q ss_pred EEEEecCCCCCCCh
Q 029593 7 CLVFDLDDTLYPSE 20 (191)
Q Consensus 7 ~iifD~DGTL~~~~ 20 (191)
.|++|+||||+.++
T Consensus 1 VVvsDIDGTiT~SD 14 (157)
T PF08235_consen 1 VVVSDIDGTITKSD 14 (157)
T ss_pred CEEEeccCCcCccc
Confidence 48999999999987
No 180
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.21 E-value=0.024 Score=36.07 Aligned_cols=49 Identities=27% Similarity=0.252 Sum_probs=34.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFE 137 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~ 137 (191)
..+.||+.++++.|+++|. ++||++. ......++.+|+.---+.++++.
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG 67 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence 4689999999999999986 9999764 34555668888876566677653
No 181
>PLN02645 phosphoglycolate phosphatase
Probab=96.16 E-value=0.02 Score=44.17 Aligned_cols=48 Identities=13% Similarity=0.015 Sum_probs=36.4
Q ss_pred CCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFE 137 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~ 137 (191)
.++|++.++++.|+++|+ ++||++. ......++.+|+....+.++++.
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~ 97 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS 97 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH
Confidence 567999999999999887 9999773 34444567788876677776643
No 182
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.15 E-value=0.019 Score=41.07 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=32.4
Q ss_pred CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCC
Q 029593 89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~ 127 (191)
....|++.++|+.+.+. .+ |-|.+...++..+++.+++.
T Consensus 44 ~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 35789999999999885 34 89999999999999988763
No 183
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.14 E-value=0.23 Score=36.27 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=31.8
Q ss_pred CCCChhHHHHHHhhccC--cEEEecCChHHHHHHHhhcCC
Q 029593 89 IKPDPQLRNLLCSITQR--KIIFTNSDRNHAITCLKRLEI 126 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~--g~i~t~~~~~~~~~~l~~~~l 126 (191)
.++.||+.+.+..|.+. .+|+|.+...+++.....+|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence 68899999999999885 348888888888888887766
No 184
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.06 E-value=0.022 Score=50.79 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=34.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
++.|++.+.++.++++|+ ++|+.+...+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 678999999999999998 88888888999999999884
No 185
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.02 E-value=0.02 Score=47.06 Aligned_cols=72 Identities=10% Similarity=0.015 Sum_probs=52.8
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
-++.+++.+.+..|++.|+ ++|+.+...+....+.+|+ ++ .-.|.--..
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~---------------------~~~p~~K~~ 397 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA---------------------RVTPEEKAA 397 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee---------------------ccCHHHHHH
Confidence 3788999999999999987 8999889899999999886 11 111333334
Q ss_pred HHHHcCCCCCceEEecCcccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFYF 188 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~~ 188 (191)
+.+.++-....+.|+||+.||-.
T Consensus 398 ~v~~l~~~g~~v~~vGDg~nD~~ 420 (499)
T TIGR01494 398 LVEALQKKGRVVAMTGDGVNDAP 420 (499)
T ss_pred HHHHHHHCCCEEEEECCChhhHH
Confidence 44444333478999999999953
No 186
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.82 E-value=0.006 Score=40.43 Aligned_cols=15 Identities=47% Similarity=0.654 Sum_probs=13.1
Q ss_pred eEEEEecCCCCCCCh
Q 029593 6 NCLVFDLDDTLYPSE 20 (191)
Q Consensus 6 k~iifD~DGTL~~~~ 20 (191)
|+|+||+||||...+
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 799999999998753
No 187
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.60 E-value=0.12 Score=42.13 Aligned_cols=31 Identities=13% Similarity=0.036 Sum_probs=22.2
Q ss_pred HHHhhccCcE--EEecCChHHHHHHHhh-cCCCc
Q 029593 98 LLCSITQRKI--IFTNSDRNHAITCLKR-LEIAD 128 (191)
Q Consensus 98 ~l~~l~~~g~--i~t~~~~~~~~~~l~~-~~l~~ 128 (191)
.++..++.|. ++|.+++-+++.+++. +|.+.
T Consensus 101 ~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCce
Confidence 3344444555 8888899999999988 77743
No 188
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.60 E-value=0.05 Score=41.22 Aligned_cols=47 Identities=17% Similarity=0.170 Sum_probs=33.6
Q ss_pred CCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeec
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICF 136 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~ 136 (191)
.++|++.++++.|+++|+ ++||++. ......++.+|+....+.++++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts 70 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS 70 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH
Confidence 467889999999999886 8888653 3344567788886555555553
No 189
>PLN02382 probable sucrose-phosphatase
Probab=95.24 E-value=0.017 Score=46.35 Aligned_cols=31 Identities=10% Similarity=-0.124 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHc---CCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVA---NVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~---~~~p~~~i~iGDs~~~~ 187 (191)
-.|..+++.+++++ |+++++++++|||.||.
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDl 207 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDA 207 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHH
Confidence 45689999999999 99999999999999984
No 190
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.09 E-value=0.011 Score=41.80 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=14.8
Q ss_pred CceEEEEecCCCCCCC
Q 029593 4 PFNCLVFDLDDTLYPS 19 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~ 19 (191)
++|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999986
No 191
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.09 E-value=0.079 Score=47.64 Aligned_cols=39 Identities=13% Similarity=0.295 Sum_probs=35.4
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
++.|++.++++.|+++|+ ++|+.+...+..+.+..|+..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN 697 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 688999999999999998 899988999999999999853
No 192
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.83 E-value=0.029 Score=41.65 Aligned_cols=29 Identities=10% Similarity=-0.173 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 159 SMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
|..+++.+++.++..++++++|||+.||.
T Consensus 168 Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~ 196 (244)
T TIGR00685 168 KGEIVKRLLWHQPGSGISPVYLGDDITDE 196 (244)
T ss_pred HHHHHHHHHHhcccCCCceEEEcCCCcHH
Confidence 46999999999999999999999999985
No 193
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.80 E-value=0.0097 Score=37.87 Aligned_cols=19 Identities=42% Similarity=0.737 Sum_probs=15.2
Q ss_pred EEEecCCCCCCChHHHHHH
Q 029593 8 LVFDLDDTLYPSETGIAAA 26 (191)
Q Consensus 8 iifD~DGTL~~~~~~~~~~ 26 (191)
++||+||||+.....++.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999988766644
No 194
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.75 E-value=0.019 Score=41.26 Aligned_cols=27 Identities=30% Similarity=0.454 Sum_probs=18.8
Q ss_pred EEEEecCCCCCCCh-HHHHHHHHHHHHH
Q 029593 7 CLVFDLDDTLYPSE-TGIAAAVKRNIEG 33 (191)
Q Consensus 7 ~iifD~DGTL~~~~-~~~~~~~~~~~~~ 33 (191)
+++||+||||++.+ ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47999999999876 3444455555554
No 195
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.40 E-value=0.02 Score=39.42 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCC-CcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEI-ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
+...|++.++|+.+.+. .+ +.|.+...++..+++.+.- ...|+.++..+..... .+. . .+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~-------------~~~--~--~K 97 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD-------------KGS--Y--IK 97 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-------------TTE--E--E-
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-------------ccc--c--cc
Confidence 56789999999999664 34 9999999999999999877 4678888876643210 011 1 14
Q ss_pred HHHHcCCCCCceEEecCccccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
-++.++-+++++++|.|++.-+
T Consensus 98 dL~~l~~~~~~vvivDD~~~~~ 119 (159)
T PF03031_consen 98 DLSKLGRDLDNVVIVDDSPRKW 119 (159)
T ss_dssp -GGGSSS-GGGEEEEES-GGGG
T ss_pred chHHHhhccccEEEEeCCHHHe
Confidence 4555577889999999998754
No 196
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.34 E-value=0.12 Score=38.86 Aligned_cols=51 Identities=14% Similarity=0.040 Sum_probs=38.0
Q ss_pred CCCCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhh-cCCCcccceeeecc
Q 029593 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKR-LEIADCFDQIICFE 137 (191)
Q Consensus 87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~-~~l~~~f~~i~~~~ 137 (191)
....++||+.++|+.|+++|+ ++||++... ....++. .+++...+.++++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 447899999999999999987 999976543 4455555 56656667777654
No 197
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=94.29 E-value=0.023 Score=39.70 Aligned_cols=17 Identities=12% Similarity=0.366 Sum_probs=15.5
Q ss_pred CceEEEEecCCCCCCCh
Q 029593 4 PFNCLVFDLDDTLYPSE 20 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~ 20 (191)
.+|+++||+||||.|..
T Consensus 6 ~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGR 22 (169)
T ss_pred cCeEEEEeCceeeECCe
Confidence 58999999999999974
No 198
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=93.87 E-value=0.033 Score=38.02 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=15.6
Q ss_pred CceEEEEecCCCCCCCh
Q 029593 4 PFNCLVFDLDDTLYPSE 20 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~ 20 (191)
++|.++||+||||+|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 68999999999999974
No 199
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=93.69 E-value=0.16 Score=41.45 Aligned_cols=72 Identities=10% Similarity=0.106 Sum_probs=54.9
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
.+.||++|=+.+||+-|+ .+|+-++-.+..+.+..|+++++.. .+| +--..+
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe-----------------------atP--EdK~~~ 501 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE-----------------------ATP--EDKLAL 501 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc-----------------------CCh--HHHHHH
Confidence 467999999999999998 7777777778888888888654321 144 444455
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
.++.+-+-.-+.|.||+-||
T Consensus 502 I~~eQ~~grlVAMtGDGTND 521 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTND 521 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCc
Confidence 56667777889999999998
No 200
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=93.41 E-value=0.1 Score=40.43 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=57.7
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCC-C------------
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATR-P------------ 149 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~-~------------ 149 (191)
+.-.|....+++.|+++|. ++||++...+...+..+ ...++||.++.-.. .+.-|+... |
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~-KP~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQAN-KPEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecC-CCcccccccCcchhhcccccchh
Confidence 4556788899999999886 99999999887777665 23356777554221 111121110 0
Q ss_pred ---CCCCCCCCC-CHHHHHHHHHHcCCCCCceEEecCcc
Q 029593 150 ---DEFPVLLKP-SMDAMKLALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 150 ---~~~~~~~kp-~~~~~~~~~~~~~~~p~~~i~iGDs~ 184 (191)
..--..+|- ....+...++.-+..-.+|+++||.+
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHl 356 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHL 356 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcc
Confidence 000000010 12345667777888999999999986
No 201
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.00 E-value=0.038 Score=38.03 Aligned_cols=16 Identities=50% Similarity=0.655 Sum_probs=13.1
Q ss_pred eEEEEecCCCCCCChH
Q 029593 6 NCLVFDLDDTLYPSET 21 (191)
Q Consensus 6 k~iifD~DGTL~~~~~ 21 (191)
|+++||+||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999998764
No 202
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=92.25 E-value=0.45 Score=43.04 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=33.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
++.+++.+.++.|+++|+ ++|+-+.+.+..+....|+-
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence 788999999999999998 99988888888888777764
No 203
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=92.06 E-value=1.9 Score=33.96 Aligned_cols=57 Identities=7% Similarity=-0.056 Sum_probs=37.5
Q ss_pred EEecCChHHHHHHHhhcCCCc--ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCc
Q 029593 108 IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSF 183 (191)
Q Consensus 108 i~t~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs 183 (191)
++|+..---.-.++=.+|+.. .++.|+++...++ ...|+++.+++|= .-.-++|||+
T Consensus 375 lvTttqLipalaKvLL~gLg~~fpiENIYSa~kiGK------------------escFerI~~RFg~-K~~yvvIgdG 433 (468)
T KOG3107|consen 375 LVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIGK------------------ESCFERIQSRFGR-KVVYVVIGDG 433 (468)
T ss_pred EEeccchhHHHHHHHHHhcCCcccchhhhhhhhccH------------------HHHHHHHHHHhCC-ceEEEEecCc
Confidence 777765433333333334443 4566777666543 5899999999998 5677889998
No 204
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=91.70 E-value=0.38 Score=33.78 Aligned_cols=75 Identities=16% Similarity=0.081 Sum_probs=43.7
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHH----HHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAIT----CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~----~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 162 (191)
.|..-++.++..-.++|- .+|+...-.+.. ..+.+.+.+....++.++ ||+|.-
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-------------------k~k~~q 174 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-------------------KPKPGQ 174 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-------------------CCCccc
Confidence 345566777777777774 777766543333 334456666555666655 444433
Q ss_pred HH--HHHHHcCCCCCceEEecCccccc
Q 029593 163 MK--LALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 163 ~~--~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
+. ..++.-++ -|+.|||-||-
T Consensus 175 y~Kt~~i~~~~~----~IhYGDSD~Di 197 (237)
T COG3700 175 YTKTQWIQDKNI----RIHYGDSDNDI 197 (237)
T ss_pred ccccHHHHhcCc----eEEecCCchhh
Confidence 32 23333343 47899998873
No 205
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.46 E-value=0.84 Score=36.90 Aligned_cols=80 Identities=16% Similarity=0.115 Sum_probs=56.5
Q ss_pred CChhHHHHHHhhccCcE---EEecC--ChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNS--DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~--~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
+.....++++.+.+++. ++|.. +.+-++..+...|.+-.-=.++.+.+..- .|.+...+..
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl--------------~KnSg~LFk~ 165 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL--------------KKNSGNLFKA 165 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh--------------hcccchHHHH
Confidence 33455678888888765 77775 45567788887776432222333333222 3888999999
Q ss_pred HHHHcCCCCCceEEecCcc
Q 029593 166 ALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~ 184 (191)
+++..+++|.+.++|||+.
T Consensus 166 Vlk~EnVd~~~w~H~GDN~ 184 (635)
T COG5610 166 VLKLENVDPKKWIHCGDNW 184 (635)
T ss_pred HHhhcCCChhheEEecCch
Confidence 9999999999999999974
No 206
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.26 E-value=0.13 Score=38.16 Aligned_cols=16 Identities=31% Similarity=0.366 Sum_probs=13.7
Q ss_pred CceEEEEecCCCCCCC
Q 029593 4 PFNCLVFDLDDTLYPS 19 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~ 19 (191)
+..+++||+||||++.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 3578999999999985
No 207
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.27 E-value=0.4 Score=35.72 Aligned_cols=48 Identities=15% Similarity=0.313 Sum_probs=37.1
Q ss_pred CCChhHHHHHHhhccCcE---EEec---CChHHHHHHHhhcCCCcccceeeecc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIADCFDQIICFE 137 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~---~~~~~~~~~l~~~~l~~~f~~i~~~~ 137 (191)
.+.|++.+++..|+++|+ ++|| .+.......++.+|+....+.++++.
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 456788999999999987 8887 34666778888899877667777653
No 208
>PRK10444 UMP phosphatase; Provisional
Probab=90.10 E-value=1.2 Score=33.16 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=53.6
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCCCcccceeeecccCCCCCCCCCC-CCCCCCCCCCCHHH
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIICFETMNPNLSKATR-PDEFPVLLKPSMDA 162 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~-~~~~~~~~kp~~~~ 162 (191)
.+.|++.+++..|+++|+ ++||+.... ....++.+|+.---+.++++...-.. +.... ....-+.+. ..
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~-~L~~~~~~~v~~~g~---~~ 92 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATAD-FLRRQEGKKAYVIGE---GA 92 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHH-HHHhCCCCEEEEEcC---HH
Confidence 568999999999999887 899977643 44455667775444555554211000 00000 000001112 34
Q ss_pred HHHHHHHcCCC----CCceEEecCccccccc
Q 029593 163 MKLALHVANVD----PRHAVRQSSFLIFYFD 189 (191)
Q Consensus 163 ~~~~~~~~~~~----p~~~i~iGDs~~~~~~ 189 (191)
+...++..|+. ..+++++|...++.|.
T Consensus 93 l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~ 123 (248)
T PRK10444 93 LIHELYKAGFTITDINPDFVIVGETRSYNWD 123 (248)
T ss_pred HHHHHHHCcCEecCCCCCEEEEeCCCCCCHH
Confidence 55555555543 3467889988876654
No 209
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=89.96 E-value=0.31 Score=32.74 Aligned_cols=50 Identities=12% Similarity=0.150 Sum_probs=32.1
Q ss_pred CCCCChhHHHHHHhhccC-cE-EEecC--ChHHHHHHHhh----cCCCcccceeeecc
Q 029593 88 LIKPDPQLRNLLCSITQR-KI-IFTNS--DRNHAITCLKR----LEIADCFDQIICFE 137 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~-g~-i~t~~--~~~~~~~~l~~----~~l~~~f~~i~~~~ 137 (191)
.+.+.|++.+++++|.+. .+ |+|.. .....+.+.+. +.+-++-..++|+.
T Consensus 66 nL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn 123 (180)
T COG4502 66 NLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN 123 (180)
T ss_pred hcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC
Confidence 478899999999999774 45 77665 34444544443 44444555566654
No 210
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.91 E-value=0.39 Score=35.98 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=35.0
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChH---HHHHHHhhcCCCcccceeeec
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCFDQIICF 136 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l~~~~l~~~f~~i~~~ 136 (191)
.+.|++.++++.|+++|+ ++||++.. .....++.+|+.--.+.++++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 378899999999999987 89986544 466677788876444555554
No 211
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=88.72 E-value=1.6 Score=32.33 Aligned_cols=59 Identities=7% Similarity=0.010 Sum_probs=41.5
Q ss_pred EEecCChHHHHHHHhhcCCCccc--ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc
Q 029593 108 IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 108 i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~ 184 (191)
++|++.---.-.+.=.++++.+| +.|+++..++ | ...|+++.+++|-+...-++|||+.
T Consensus 180 LVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----------------K--~~cFe~I~~Rfg~p~~~f~~IGDG~ 240 (274)
T TIGR01658 180 LVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG----------------K--LQCFKWIKERFGHPKVRFCAIGDGW 240 (274)
T ss_pred EEEcCccHHHHHHHHHhccCCccccccccchhhcc----------------h--HHHHHHHHHHhCCCCceEEEeCCCh
Confidence 77776643333333345666555 4466666544 4 6999999999999889999999985
No 212
>PLN03017 trehalose-phosphatase
Probab=88.69 E-value=0.35 Score=38.11 Aligned_cols=30 Identities=10% Similarity=-0.110 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHcCCCC---CceEEecCccccc
Q 029593 158 PSMDAMKLALHVANVDP---RHAVRQSSFLIFY 187 (191)
Q Consensus 158 p~~~~~~~~~~~~~~~p---~~~i~iGDs~~~~ 187 (191)
.|..+++.+++.++... .-.++|||...|=
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDE 315 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDE 315 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccH
Confidence 46899999999988653 3589999998874
No 213
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=87.54 E-value=0.79 Score=37.27 Aligned_cols=42 Identities=21% Similarity=0.336 Sum_probs=26.8
Q ss_pred CCceEEEEecCCCCCCChH-HHHHHHHHHHHHHHHHHhCCCHH
Q 029593 3 SPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSET 44 (191)
Q Consensus 3 ~~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~g~~~~ 44 (191)
.++++|-||+|-||+.... .+..-..+...+++.++.|.|..
T Consensus 10 ~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~~ 52 (448)
T PF05761_consen 10 KDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPEE 52 (448)
T ss_dssp CC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--GG
T ss_pred ccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCHH
Confidence 3699999999999999876 55555555666667777888754
No 214
>PLN02423 phosphomannomutase
Probab=87.34 E-value=0.38 Score=35.74 Aligned_cols=27 Identities=4% Similarity=-0.427 Sum_probs=23.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecC----ccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSS----FLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGD----s~~~~ 187 (191)
+-.|..+++.++ +++++++||| +.||+
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcH
Confidence 456688888888 8999999999 79996
No 215
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=86.29 E-value=1.1 Score=39.32 Aligned_cols=27 Identities=15% Similarity=0.022 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHc------CCCCCceEEecCcc
Q 029593 158 PSMDAMKLALHVA------NVDPRHAVRQSSFL 184 (191)
Q Consensus 158 p~~~~~~~~~~~~------~~~p~~~i~iGDs~ 184 (191)
.|..+.+.+++++ +-.++=++++||..
T Consensus 678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~ 710 (797)
T PLN03063 678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFL 710 (797)
T ss_pred ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCC
Confidence 4677888888766 23567788899853
No 216
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=86.14 E-value=0.5 Score=32.14 Aligned_cols=16 Identities=50% Similarity=0.603 Sum_probs=14.1
Q ss_pred ceEEEEecCCCCCCCh
Q 029593 5 FNCLVFDLDDTLYPSE 20 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~ 20 (191)
.+.+++|+||||+.+.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 4689999999999985
No 217
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=85.54 E-value=0.49 Score=40.96 Aligned_cols=29 Identities=7% Similarity=-0.223 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
-.|..+++.+++ +++++.++++||+.||-
T Consensus 656 vnKG~al~~ll~--~~~~d~vl~~GD~~nDe 684 (726)
T PRK14501 656 VNKGRAVRRLLE--AGPYDFVLAIGDDTTDE 684 (726)
T ss_pred CCHHHHHHHHHh--cCCCCEEEEECCCCChH
Confidence 446899999998 78899999999999984
No 218
>PLN02151 trehalose-phosphatase
Probab=85.52 E-value=0.62 Score=36.60 Aligned_cols=30 Identities=7% Similarity=-0.134 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHcCCCCC---ceEEecCccccc
Q 029593 158 PSMDAMKLALHVANVDPR---HAVRQSSFLIFY 187 (191)
Q Consensus 158 p~~~~~~~~~~~~~~~p~---~~i~iGDs~~~~ 187 (191)
.|..+++.+++.++..-. -+++|||-..|=
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDE 301 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDE 301 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHH
Confidence 468999999999876532 389999988873
No 219
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=85.51 E-value=1.8 Score=34.47 Aligned_cols=94 Identities=15% Similarity=0.034 Sum_probs=60.3
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccC-CC-----------------CCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETM-NP-----------------NLSK 145 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~-~~-----------------~~~~ 145 (191)
...+.+...+..+++.|. +.||++..+.-....++ +...+|+.++..... ++ ...+
T Consensus 198 ~~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~ 277 (424)
T KOG2469|consen 198 VYDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGD 277 (424)
T ss_pred eecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccc
Confidence 334445557888888875 99998887777666554 455678876654310 00 0011
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
.+.|. ...+.+++.....+++.++..-.+++++||.+-
T Consensus 278 ~~~p~--e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~ 315 (424)
T KOG2469|consen 278 NTGPL--EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIW 315 (424)
T ss_pred cCCcc--hhcccCCcchHHHHHHHhcccccceeeccccee
Confidence 12222 223445567888899999999999999999863
No 220
>PTZ00174 phosphomannomutase; Provisional
Probab=85.48 E-value=0.67 Score=34.45 Aligned_cols=28 Identities=4% Similarity=-0.365 Sum_probs=24.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecC----ccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSS----FLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGD----s~~~~ 187 (191)
+-.|..+++.+++. ++++++||| +.||.
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDi 217 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDY 217 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcH
Confidence 45568999999999 699999999 89985
No 221
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=85.34 E-value=0.57 Score=32.46 Aligned_cols=16 Identities=50% Similarity=0.625 Sum_probs=13.9
Q ss_pred eEEEEecCCCCCCChH
Q 029593 6 NCLVFDLDDTLYPSET 21 (191)
Q Consensus 6 k~iifD~DGTL~~~~~ 21 (191)
+++++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5899999999998853
No 222
>PLN02580 trehalose-phosphatase
Probab=85.22 E-value=0.53 Score=37.40 Aligned_cols=31 Identities=6% Similarity=-0.137 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHcCCCCCc---eEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVDPRH---AVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~---~i~iGDs~~~~ 187 (191)
-.|..+++.+++.+++...+ .++|||..||-
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDe 333 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDE 333 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHH
Confidence 35689999999999998763 38999999985
No 223
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=85.06 E-value=0.59 Score=35.19 Aligned_cols=30 Identities=17% Similarity=0.042 Sum_probs=25.2
Q ss_pred CCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593 158 PSMDAMKLALHVANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~~ 187 (191)
.|...++++++.......-+++.||...|-
T Consensus 182 ~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE 211 (266)
T COG1877 182 SKGAAIKYIMDELPFDGRFPIFAGDDLTDE 211 (266)
T ss_pred chHHHHHHHHhcCCCCCCcceecCCCCccH
Confidence 368889999998888778899999998874
No 224
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=84.71 E-value=0.81 Score=32.79 Aligned_cols=28 Identities=21% Similarity=0.402 Sum_probs=20.1
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKRNIEG 33 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~~~~~ 33 (191)
-.++||+||||..........+...+.+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 4899999999999876555555554433
No 225
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=84.37 E-value=2.9 Score=31.28 Aligned_cols=40 Identities=13% Similarity=0.225 Sum_probs=33.7
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
-.+.+..++++.+|+++|+ ++|+.+...+...++.+++..
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 3567888999999999997 888888888888889888754
No 226
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=84.00 E-value=0.95 Score=31.19 Aligned_cols=18 Identities=39% Similarity=0.403 Sum_probs=15.6
Q ss_pred CceEEEEecCCCCCCChH
Q 029593 4 PFNCLVFDLDDTLYPSET 21 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~ 21 (191)
+..++++|+|.||+.+..
T Consensus 5 ~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CceEEEEeCCCCcccccc
Confidence 567999999999999864
No 227
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=83.92 E-value=2.7 Score=31.67 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=34.7
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF 130 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f 130 (191)
...+.+++++..|+++|+ ++|+.+...+...++.+++..++
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 456789999999999987 88998888899999999886543
No 228
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=82.78 E-value=0.86 Score=40.20 Aligned_cols=32 Identities=9% Similarity=-0.199 Sum_probs=26.5
Q ss_pred CCCCHHHHHHHHHH---cCCCCCceEEecCccccc
Q 029593 156 LKPSMDAMKLALHV---ANVDPRHAVRQSSFLIFY 187 (191)
Q Consensus 156 ~kp~~~~~~~~~~~---~~~~p~~~i~iGDs~~~~ 187 (191)
+-.|..+++.+++. +|..|+.+++|||+.||-
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDe 794 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDE 794 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHH
Confidence 34568899998754 689999999999999984
No 229
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=82.46 E-value=2.6 Score=36.94 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=35.5
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
+..||+++.++.++.+|+ .+|+.+...++.+....|+-.
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt 688 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILT 688 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHccccc
Confidence 788999999999999998 999999999999999888854
No 230
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=81.99 E-value=1.3 Score=38.40 Aligned_cols=15 Identities=40% Similarity=0.585 Sum_probs=10.3
Q ss_pred CceEEEEecCCCCCC
Q 029593 4 PFNCLVFDLDDTLYP 18 (191)
Q Consensus 4 ~~k~iifD~DGTL~~ 18 (191)
+.++|+||+||||++
T Consensus 491 ~~rLi~~D~DGTL~~ 505 (726)
T PRK14501 491 SRRLLLLDYDGTLVP 505 (726)
T ss_pred cceEEEEecCccccC
Confidence 356777777777776
No 231
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=81.84 E-value=8.8 Score=28.28 Aligned_cols=48 Identities=25% Similarity=0.245 Sum_probs=33.5
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCC---hHHHHHHHhh-cCCCcccceeeec
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKR-LEIADCFDQIICF 136 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---~~~~~~~l~~-~~l~~~f~~i~~~ 136 (191)
-.++|++.+.+..++++|+ ++||+. .......+.. +|+.-..+.++++
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 4578899999999998876 888765 3334444555 6776556666654
No 232
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=81.28 E-value=0.78 Score=36.83 Aligned_cols=18 Identities=28% Similarity=0.344 Sum_probs=15.6
Q ss_pred CceEEEEecCCCCCCChH
Q 029593 4 PFNCLVFDLDDTLYPSET 21 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~ 21 (191)
..+.|++|+||||+.++.
T Consensus 374 n~kiVVsDiDGTITkSD~ 391 (580)
T COG5083 374 NKKIVVSDIDGTITKSDA 391 (580)
T ss_pred CCcEEEEecCCcEEehhh
Confidence 468999999999999874
No 233
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=81.10 E-value=3.3 Score=29.86 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=33.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
-.+.+...+.+.+|+++|+ ++|+.+...++...+.+++..
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 4577899999999999987 888888888888888888753
No 234
>PLN02382 probable sucrose-phosphatase
Probab=80.27 E-value=1.4 Score=35.49 Aligned_cols=28 Identities=14% Similarity=0.030 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHHHHcCCC----CCceEEecCc
Q 029593 156 LKPSMDAMKLALHVANVD----PRHAVRQSSF 183 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~----p~~~i~iGDs 183 (191)
..+.++++..+++++++- |.++.-+.+.
T Consensus 245 ~~~~~~GI~~al~~f~l~~~~~~~~~~~~~~~ 276 (413)
T PLN02382 245 TERCAAGIIQAIGHFNLGPNVSPRDVSDFLYG 276 (413)
T ss_pred CCCCccHHHHHHHHhCCCCCCChhhccccccc
Confidence 356788899999998864 5566544443
No 235
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=79.91 E-value=4.4 Score=29.29 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=31.8
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
..+..++++..|+++|+ ++||.+...++..++.+++.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34458899999999997 99999999999999999875
No 236
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=78.93 E-value=2.5 Score=31.07 Aligned_cols=31 Identities=10% Similarity=-0.107 Sum_probs=20.7
Q ss_pred CCCHHHHHHHHHHcCCC---CCceEEecCccccc
Q 029593 157 KPSMDAMKLALHVANVD---PRHAVRQSSFLIFY 187 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~---p~~~i~iGDs~~~~ 187 (191)
..|..+++.+++.++.. +.-++++||...|-
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE 197 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDE 197 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHH
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCH
Confidence 34689999999999876 89999999998763
No 237
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=78.55 E-value=12 Score=27.33 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCCCcccceeee
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIIC 135 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l~~~f~~i~~ 135 (191)
....||+.+.++.|+.++. .+||...+. +...|.++|+.--=+.|++
T Consensus 22 ~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~t 74 (262)
T KOG3040|consen 22 DAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFT 74 (262)
T ss_pred cccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcC
Confidence 3478999999999997765 889876654 4455666676443333444
No 238
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=78.51 E-value=4.8 Score=29.23 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=32.8
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
.+.|...+.+.+|+++|+ ++|+.+...+....+.+++..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 466889999999999987 888888888888888888754
No 239
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=78.45 E-value=9.8 Score=25.28 Aligned_cols=80 Identities=10% Similarity=0.047 Sum_probs=51.1
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCC-hHHHHHHHhhcCCCccccee-----eecccCCCCCCCCCCCCCCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQI-----ICFETMNPNLSKATRPDEFPVLLKPS 159 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~-~~~~~~~l~~~~l~~~f~~i-----~~~~~~~~~~~~~~~~~~~~~~~kp~ 159 (191)
.-.+++++..|.+|+++|+ ++|++. .+.+...|+.+.+..-+..- ++...++. -.+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~---------------gsk 107 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGD---------------GSK 107 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecC---------------ccc
Confidence 5678999999999999999 666654 45677788887664322221 11222222 223
Q ss_pred HHHHHHHHHHcCCCCCceEEecCc
Q 029593 160 MDAMKLALHVANVDPRHAVRQSSF 183 (191)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~i~iGDs 183 (191)
...+..+-+..+....+..++.|-
T Consensus 108 lghfke~~n~s~~~~k~~~~fdDe 131 (144)
T KOG4549|consen 108 LGHFKEFTNNSNSIEKNKQVFDDE 131 (144)
T ss_pred chhHHHHhhccCcchhceeeeccc
Confidence 456677777777776677777663
No 240
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=78.12 E-value=5 Score=30.11 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=34.0
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
-.+.+..++.+.+|+++|+ ++|+.+...++..++.+++..
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 3577889999999999997 888888888898999988754
No 241
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=78.08 E-value=1.1 Score=35.32 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=15.9
Q ss_pred CceEEEEecCCCCCCChH
Q 029593 4 PFNCLVFDLDDTLYPSET 21 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~ 21 (191)
..|.+.||+||||+++..
T Consensus 74 ~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CcceEEEecCCceeecCC
Confidence 468999999999999875
No 242
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=77.95 E-value=7.3 Score=29.85 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=29.5
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHH---HhhcCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITC---LKRLEIA 127 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~---l~~~~l~ 127 (191)
-.+.||+.+.++.|++.|. ++||++....+.. .+.+|+.
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 4789999999999999876 8999876654444 3455654
No 243
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=77.92 E-value=4.2 Score=29.79 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=31.3
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
..+...+++.+|+++|+ ++|+.+...+...++.+|+..
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34568899999999987 788888888888899998754
No 244
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=77.48 E-value=5.9 Score=29.41 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=32.8
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
.+.+...+.+.+|+++|+ ++|+.+...+...++.+++.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 566888999999999987 89999988888888888775
No 245
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=76.95 E-value=2.2 Score=37.80 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=14.3
Q ss_pred CceEEEEecCCCCCCCh
Q 029593 4 PFNCLVFDLDDTLYPSE 20 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~ 20 (191)
+.++|++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 46899999999999765
No 246
>PRK10976 putative hydrolase; Provisional
Probab=75.74 E-value=6.4 Score=29.36 Aligned_cols=40 Identities=23% Similarity=0.171 Sum_probs=33.3
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
-.+.+...+.+.+++++|+ ++|+.+...+...++.+++..
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3567888999999999997 888888888888888888753
No 247
>PLN02580 trehalose-phosphatase
Probab=75.71 E-value=2.8 Score=33.44 Aligned_cols=17 Identities=35% Similarity=0.352 Sum_probs=13.4
Q ss_pred CceEEEEecCCCCCCCh
Q 029593 4 PFNCLVFDLDDTLYPSE 20 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~ 20 (191)
+-.+++||+||||.+..
T Consensus 118 k~~~LfLDyDGTLaPIv 134 (384)
T PLN02580 118 KKIALFLDYDGTLSPIV 134 (384)
T ss_pred CCeEEEEecCCccCCCC
Confidence 34688999999998653
No 248
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=75.22 E-value=5.8 Score=28.80 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=33.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
..+.+..++++..|+++|+ ++|+.+...+...++.+++.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 4577999999999999997 88888888899999988876
No 249
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=74.20 E-value=7.1 Score=28.17 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=31.4
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
.+.+...+++.+|+++|+ ++|+.+...+...++.+++.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 466788899999999997 88888888888888888753
No 250
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=73.61 E-value=6.7 Score=29.27 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=32.8
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
.+.|...+.+.+++++|+ ++|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 567788999999999997 888888888888888888753
No 251
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=73.45 E-value=7.5 Score=28.97 Aligned_cols=40 Identities=13% Similarity=0.286 Sum_probs=35.4
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
....+..++++++++++|+ ++|+.+...+...++.+++..
T Consensus 19 ~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 19 KTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 4578899999999999998 889888989999999999875
No 252
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=71.94 E-value=9.7 Score=29.29 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=32.6
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
...+.+.+.+.+|+++|+ ++|+.....++.+.+.+++..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 456778999999999998 777778888888999998864
No 253
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=70.83 E-value=4.5 Score=32.28 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=24.7
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCH
Q 029593 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSE 43 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~ 43 (191)
++.++-||||+||...+..-..+...-+..+..+..|.+.
T Consensus 26 ~i~~~GfdmDyTL~~Y~~~~~esLay~~~~~~l~~~Gyp~ 65 (424)
T KOG2469|consen 26 NIGIVGFDMDYTLARYNLPEMESLAYDLAQFLLKDKGYPN 65 (424)
T ss_pred cCcEEeeccccchhhhcccchHHHHHHHHHHHHHhcCChh
Confidence 6899999999999987643222222113334455666653
No 254
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=70.61 E-value=34 Score=26.72 Aligned_cols=47 Identities=11% Similarity=0.131 Sum_probs=32.8
Q ss_pred hhHHHHHHhhccCcE-EEecCCh-----------------------HHHHHHHhhcCCCcccceeeecccC
Q 029593 93 PQLRNLLCSITQRKI-IFTNSDR-----------------------NHAITCLKRLEIADCFDQIICFETM 139 (191)
Q Consensus 93 ~~~~~~l~~l~~~g~-i~t~~~~-----------------------~~~~~~l~~~~l~~~f~~i~~~~~~ 139 (191)
..-..+|+.+.++|+ ++|+... ..++..++..|+..-+..+|+.+..
T Consensus 177 dtKVdLL~y~~~~~l~Viss~GaaaksDPTrv~v~Dis~t~~DPlsR~vRrrLrk~GI~~GIpVVFS~Ekp 247 (430)
T KOG2018|consen 177 DTKVDLLEYCYNHGLKVISSTGAAAKSDPTRVNVADISETEEDPLSRSVRRRLRKRGIEGGIPVVFSLEKP 247 (430)
T ss_pred hhhhHHHHHHHHcCCceEeccCccccCCCceeehhhccccccCcHHHHHHHHHHHhccccCCceEEecCCC
Confidence 344578888888888 5554221 3467778888998888888887743
No 255
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=70.45 E-value=11 Score=28.09 Aligned_cols=37 Identities=14% Similarity=0.034 Sum_probs=31.3
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
..+..++++..|+++|+ ++|+.+...+...++.+++.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34568899999999987 88888888899999998875
No 256
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=69.49 E-value=12 Score=26.19 Aligned_cols=17 Identities=24% Similarity=0.182 Sum_probs=13.7
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
..-++.|+||||.+...
T Consensus 6 ~~~~ciDIDGtit~~~t 22 (194)
T COG5663 6 QLRCCIDIDGTITDDPT 22 (194)
T ss_pred HhheeeccCCceecCcc
Confidence 34578999999999764
No 257
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=69.27 E-value=46 Score=24.95 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=37.0
Q ss_pred CCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCC
Q 029593 71 IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEI 126 (191)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l 126 (191)
+....+...+.+ +.+.+++|+.++++.|+++++ |.|.|-.+-++.++++.+.
T Consensus 75 l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~ 129 (246)
T PF05822_consen 75 LTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV 129 (246)
T ss_dssp -BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred cCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence 444555555554 347899999999999999998 9998989999999998754
No 258
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=67.87 E-value=3.7 Score=30.89 Aligned_cols=17 Identities=47% Similarity=0.544 Sum_probs=14.7
Q ss_pred CceEEEEecCCCCCCCh
Q 029593 4 PFNCLVFDLDDTLYPSE 20 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~ 20 (191)
+.|++++|+|+||+.+.
T Consensus 88 ~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 88 GRKTLVLDLDETLVHSS 104 (262)
T ss_pred CCceEEEeCCCcccccc
Confidence 46899999999998775
No 259
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=67.09 E-value=3.6 Score=36.78 Aligned_cols=28 Identities=11% Similarity=-0.121 Sum_probs=21.3
Q ss_pred CCCCHHHHHHHHHHcC------CCCCceEEecCc
Q 029593 156 LKPSMDAMKLALHVAN------VDPRHAVRQSSF 183 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~------~~p~~~i~iGDs 183 (191)
+-.|..+++.+++++. -+|+=++++||.
T Consensus 766 gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd 799 (934)
T PLN03064 766 GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHF 799 (934)
T ss_pred CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCC
Confidence 3456899999998762 357789999994
No 260
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=66.33 E-value=11 Score=34.25 Aligned_cols=32 Identities=6% Similarity=-0.103 Sum_probs=28.3
Q ss_pred CCCHHHHHHHHHHcCCCCCceEE-ecCccc-ccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVR-QSSFLI-FYF 188 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~-iGDs~~-~~~ 188 (191)
-.+..++++++.+.|++.+++++ +|||-| ||=
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e 988 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYE 988 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHH
Confidence 45689999999999999999955 999999 874
No 261
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=66.29 E-value=1.8 Score=33.42 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=16.4
Q ss_pred ceEEEEecCCCCCCChHHHH
Q 029593 5 FNCLVFDLDDTLYPSETGIA 24 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~~~~ 24 (191)
.=+++||+||+|+.....+.
T Consensus 35 ~fgfafDIDGVL~RG~~~i~ 54 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRGHRPIP 54 (389)
T ss_pred ceeEEEecccEEEecCCCCc
Confidence 34899999999999876554
No 262
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=65.13 E-value=17 Score=32.27 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=31.5
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~ 128 (191)
.++.++.+..++.|++.+. .+|+.+.-.+..+.+.+++..
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~ 716 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVE 716 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeec
Confidence 4778999999999988765 788877777777777776643
No 263
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=63.50 E-value=15 Score=27.54 Aligned_cols=38 Identities=5% Similarity=0.090 Sum_probs=32.2
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
...+..++.+.+|+++|+ ++|+.+...+...++.+++.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 345778899999999997 88888888899999998874
No 264
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=62.63 E-value=7.7 Score=30.84 Aligned_cols=26 Identities=4% Similarity=0.083 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHc----CCCCCceEEecCcc
Q 029593 159 SMDAMKLALHVA----NVDPRHAVRQSSFL 184 (191)
Q Consensus 159 ~~~~~~~~~~~~----~~~p~~~i~iGDs~ 184 (191)
|..+.+.+.+.+ +++|+++++|||-.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF 379 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQF 379 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhh
Confidence 367888888888 89999999999954
No 265
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=61.06 E-value=28 Score=26.80 Aligned_cols=35 Identities=26% Similarity=0.262 Sum_probs=28.4
Q ss_pred CCCCChhHHHHHHhhccCc-E---EEecCChHHHHHHHh
Q 029593 88 LIKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLK 122 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g-~---i~t~~~~~~~~~~l~ 122 (191)
...++|.+-++++.+++.| + ++||+....+...+.
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~ 128 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELK 128 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc
Confidence 3688999999999999998 4 999999855554444
No 266
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=60.99 E-value=7 Score=23.49 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.4
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
.-.++++-|||.++++.
T Consensus 40 ~~~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 40 LVTLVLEEDGTVVDTEE 56 (78)
T ss_pred CcEEEEeCCCCEEccHH
Confidence 45789999999998874
No 267
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=60.73 E-value=6.9 Score=23.68 Aligned_cols=17 Identities=35% Similarity=0.315 Sum_probs=14.5
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
.-.++++-|||.++++.
T Consensus 39 ~~~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 39 VLTLVLEEDGTAVDSED 55 (81)
T ss_pred ceEEEEecCCCEEccHH
Confidence 35789999999999874
No 268
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=58.84 E-value=41 Score=26.34 Aligned_cols=35 Identities=14% Similarity=0.015 Sum_probs=26.2
Q ss_pred CCCChhHHHHHHhhccCc---E-EEecCChHHHHHHHhh
Q 029593 89 IKPDPQLRNLLCSITQRK---I-IFTNSDRNHAITCLKR 123 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g---~-i~t~~~~~~~~~~l~~ 123 (191)
-+++||+...++.|.+.| + -+||++........+.
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~ef 233 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEF 233 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHH
Confidence 478999999999998877 3 8888887654444333
No 269
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=57.61 E-value=10 Score=22.16 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=17.1
Q ss_pred HHHHHHHHHcCCCCCceEEecCccc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
.++...|.+.|+.+.+++.|||=--
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig~~eF 67 (69)
T PF09269_consen 43 MGVEKALRKAGAKEGDTVRIGDYEF 67 (69)
T ss_dssp TTHHHHHHTTT--TT-EEEETTEEE
T ss_pred CCHHHHHHHcCCCCCCEEEEcCEEE
Confidence 4566777888999999999998543
No 270
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=57.39 E-value=8.4 Score=22.91 Aligned_cols=17 Identities=29% Similarity=0.298 Sum_probs=14.2
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
.-.++++-|||.++++.
T Consensus 38 ~~~l~L~eDGT~VddEe 54 (74)
T smart00266 38 PVTLVLEEDGTIVDDEE 54 (74)
T ss_pred CcEEEEecCCcEEccHH
Confidence 45788999999998874
No 271
>PF03671 Ufm1: Ubiquitin fold modifier 1 protein; InterPro: IPR005375 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade. There are many different E3 ligases, which are responsible for the type of ubiquitin chain formed, the specificity of the target protein, and the regulation of the ubiquitinylation process []. Ubiquitinylation is an important regulatory tool that controls the concentration of key signalling proteins, such as those involved in cell cycle control, as well as removing misfolded, damaged or mutant proteins that could be harmful to the cell. Several ubiquitin-like molecules have been discovered, such as Ufm1 (IPR005375 from INTERPRO), SUMO1 (IPR003653 from INTERPRO), NEDD8, Rad23 (IPR004806 from INTERPRO), Elongin B and Parkin (IPR003977 from INTERPRO), the latter being involved in Parkinson's disease []. Ubiquitin-like molecules (UBLs) can be divided into two subclasses: type-1 UBLs, which ligate to target proteins in a manner similar, but not identical, to the ubiquitylation pathway, such as SUMO, NEDD8, and UCRP/ISG15, and type-2 UBLs (also called UDPs, ubiquitin-domain proteins), which contain ubiquitin-like structure embedded in a variety of different classes of large proteins with apparently distinct functions, such as Rad23, Elongin B, Scythe, Parkin, and HOIL-1. This entry represents Ufm1 (ubiquitin-fold modifier), which is a ubiquitin-like protein with structural similarities to ubiquitin [, ]. Ufm1 is one of a number of ubiquitin-like modifiers that conjugate to target proteins in cells through Uba5 (E1) and Ufc1 (E2). The Ufm1-system is conserved in metazoa and plants, suggesting it has a potential role in multicellular organisms []. Human Ufm1 is synthesized as a precursor consisting of 85 amino-acid residues. Prior to activation by Uba5, the extra amino acids at the C-terminal region of Ufm1 are removed to expose Gly, which is necessary for conjugation to target molecule(s). C-terminal processing of Ufm1 requires two specific cysteine peptidases (IPR012462 from INTERPRO): UfSP1 and UfSP2; both peptidases are also able to release Ufm1 from Ufm1-conjugated cellular proteins. UfSP2 is present in most, if not all, of multi-cellular organisms including plant, nematode, fly, and mammal, whereas UfSP1 is not present in plants and nematodes []. For further information on ubiquitin, please see Protein of the Month [].; PDB: 1J0G_A 1WXS_A 1L7Y_A.
Probab=56.32 E-value=17 Score=21.43 Aligned_cols=24 Identities=21% Similarity=0.225 Sum_probs=19.8
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEe
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~i 180 (191)
-|-...++.+++++.+++..++.|
T Consensus 26 apftaVlkfaAeeF~vp~~tsaiI 49 (76)
T PF03671_consen 26 APFTAVLKFAAEEFKVPPATSAII 49 (76)
T ss_dssp SBHHHHHHHHHHHTTS-SSSEEEE
T ss_pred CchHHHHHHHHHHcCCCCceEEEE
Confidence 556789999999999999988776
No 272
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=55.96 E-value=16 Score=27.38 Aligned_cols=89 Identities=16% Similarity=0.111 Sum_probs=54.8
Q ss_pred HHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcC---
Q 029593 97 NLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN--- 171 (191)
Q Consensus 97 ~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~--- 171 (191)
+-++.|+++.+ +--++-..++.+.|.+.|+... .++..+++..++-..++.+.....+|||.+.++.-+...+
T Consensus 23 ~~lekl~~~~V~VvGiGGVGSw~veALaRsGig~i--tlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c 100 (263)
T COG1179 23 DGLEKLKQAHVCVVGIGGVGSWAVEALARSGIGRI--TLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPEC 100 (263)
T ss_pred hHHHHHhhCcEEEEecCchhHHHHHHHHHcCCCeE--EEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCc
Confidence 56888999988 4445667888999999988653 1223333333323334444556678999999988887754
Q ss_pred -CCCCceEEecCccccc
Q 029593 172 -VDPRHAVRQSSFLIFY 187 (191)
Q Consensus 172 -~~p~~~i~iGDs~~~~ 187 (191)
+++-+..+=.|+..+|
T Consensus 101 ~V~~~~~f~t~en~~~~ 117 (263)
T COG1179 101 EVTAINDFITEENLEDL 117 (263)
T ss_pred eEeehHhhhCHhHHHHH
Confidence 2333333344444444
No 273
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.05 E-value=13 Score=27.99 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=31.0
Q ss_pred CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc
Q 029593 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL 124 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~ 124 (191)
.+.+..|..++++.|+++++ +.|.+-.+.++.++++.
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~ 175 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQK 175 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHH
Confidence 36778899999999999988 88888888888887664
No 274
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=51.82 E-value=12 Score=22.58 Aligned_cols=17 Identities=29% Similarity=0.188 Sum_probs=14.1
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
.-.++++-|||.++++.
T Consensus 40 ~~~lvL~eDGTeVddEe 56 (78)
T cd01615 40 PVTLVLEEDGTEVDDEE 56 (78)
T ss_pred CeEEEEeCCCcEEccHH
Confidence 34689999999998874
No 275
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]
Probab=51.75 E-value=21 Score=25.99 Aligned_cols=24 Identities=13% Similarity=0.083 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEe
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~i 180 (191)
-|.+..++.++.++|++.+++-++
T Consensus 100 IPgiSS~q~a~ARlg~~~~~~~~i 123 (210)
T COG2241 100 IPGISSVQLAAARLGWPLQDTEVI 123 (210)
T ss_pred ecChhHHHHHHHHhCCChHHeEEE
Confidence 677788999999999988877665
No 276
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=50.73 E-value=12 Score=22.59 Aligned_cols=16 Identities=31% Similarity=0.326 Sum_probs=13.8
Q ss_pred eEEEEecCCCCCCChH
Q 029593 6 NCLVFDLDDTLYPSET 21 (191)
Q Consensus 6 k~iifD~DGTL~~~~~ 21 (191)
-.++++-|||.++++.
T Consensus 43 ~~lvL~eDGT~VddEe 58 (80)
T cd06536 43 ITLVLAEDGTIVEDED 58 (80)
T ss_pred eEEEEecCCcEEccHH
Confidence 5788999999998875
No 277
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=50.10 E-value=69 Score=25.73 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=46.7
Q ss_pred hHHHHHHhhccCc-E----EEecCCh--HHHHHHHhhcCCC-cccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 94 QLRNLLCSITQRK-I----IFTNSDR--NHAITCLKRLEIA-DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 94 ~~~~~l~~l~~~g-~----i~t~~~~--~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
.+..++.++.+.+ + ++|+..+ +....+++.+++. ..++.-+.-. +.+-.+..-.
T Consensus 18 Kmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~------------------~~tl~~~t~~ 79 (383)
T COG0381 18 KMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKP------------------GQTLGEITGN 79 (383)
T ss_pred HHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhcccc------------------CCCHHHHHHH
Confidence 3456678887775 3 8888887 8899999999997 4444433310 1222233333
Q ss_pred HHHHc-----CCCCCceEEecCcc
Q 029593 166 ALHVA-----NVDPRHAVRQSSFL 184 (191)
Q Consensus 166 ~~~~~-----~~~p~~~i~iGDs~ 184 (191)
++..+ ...|+-+++-||+-
T Consensus 80 ~i~~~~~vl~~~kPD~VlVhGDT~ 103 (383)
T COG0381 80 IIEGLSKVLEEEKPDLVLVHGDTN 103 (383)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcc
Confidence 33222 47899999999974
No 278
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=49.16 E-value=41 Score=24.83 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=19.6
Q ss_pred hhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCC
Q 029593 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEI 126 (191)
Q Consensus 93 ~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l 126 (191)
|.+.+++++++++|+ ++|+.+...++...+.+++
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 444566666666664 5555555556666555554
No 279
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=48.61 E-value=14 Score=22.30 Aligned_cols=16 Identities=38% Similarity=0.385 Sum_probs=13.8
Q ss_pred eEEEEecCCCCCCChH
Q 029593 6 NCLVFDLDDTLYPSET 21 (191)
Q Consensus 6 k~iifD~DGTL~~~~~ 21 (191)
-.++++-|||.++++.
T Consensus 40 ~~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 40 SSLVLDEDGTGVDTEE 55 (79)
T ss_pred cEEEEecCCcEEccHH
Confidence 4689999999998874
No 280
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.17 E-value=35 Score=22.20 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=27.5
Q ss_pred CCChhHHHHHHhhccCcE----EEec-CChHHHHHHHhhcCCCcccce
Q 029593 90 KPDPQLRNLLCSITQRKI----IFTN-SDRNHAITCLKRLEIADCFDQ 132 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~----i~t~-~~~~~~~~~l~~~~l~~~f~~ 132 (191)
...+.++++++.|++.|. ++-+ .........++.+|++.+|+.
T Consensus 62 ~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~~~~~ 109 (122)
T cd02071 62 GHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAEIFGP 109 (122)
T ss_pred hhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCEEECC
Confidence 345677888888888743 3444 344444666778888665554
No 281
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=45.30 E-value=12 Score=27.38 Aligned_cols=13 Identities=38% Similarity=0.508 Sum_probs=7.9
Q ss_pred EEecCCCCCCChH
Q 029593 9 VFDLDDTLYPSET 21 (191)
Q Consensus 9 ifD~DGTL~~~~~ 21 (191)
+||+||||.+...
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6899999998654
No 282
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=44.55 E-value=1.4e+02 Score=23.62 Aligned_cols=76 Identities=12% Similarity=0.102 Sum_probs=47.1
Q ss_pred ChhHHHHHHhhccCcE----EEecCChHHHHHHHhh-cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593 92 DPQLRNLLCSITQRKI----IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (191)
Q Consensus 92 ~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 166 (191)
.|=+...++.|+++|+ ++++...+.++..+.. .....-+..+...+..+ -...+..+
T Consensus 32 kPii~~~l~~L~~~Gv~eivi~~~y~~~~i~~~~~d~~~~~~~I~y~~e~~~lG------------------Tag~l~~a 93 (358)
T COG1208 32 KPLIEYVLEALAAAGVEEIVLVVGYLGEQIEEYFGDGEGLGVRITYVVEKEPLG------------------TAGALKNA 93 (358)
T ss_pred ccHHHHHHHHHHHCCCcEEEEEeccchHHHHHHHhcccccCCceEEEecCCcCc------------------cHHHHHHH
Confidence 3677888999999998 4445555555554433 22222233333333222 36789999
Q ss_pred HHHcCCCCCceEEecCcccc
Q 029593 167 LHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 167 ~~~~~~~p~~~i~iGDs~~~ 186 (191)
.+.++. -.=+++-||.+.+
T Consensus 94 ~~~l~~-~~f~v~~GDv~~~ 112 (358)
T COG1208 94 LDLLGG-DDFLVLNGDVLTD 112 (358)
T ss_pred HHhcCC-CcEEEEECCeeec
Confidence 998887 4566778998876
No 283
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=44.05 E-value=36 Score=26.09 Aligned_cols=34 Identities=15% Similarity=0.029 Sum_probs=28.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEecCccccccc
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFD 189 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~~~ 189 (191)
.-|.++.+..++..+|+..+.+|++=|..+.+|+
T Consensus 71 ~lp~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A 104 (285)
T COG2897 71 MLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFA 104 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCCCCeeh
Confidence 5788999999999999998887777776777665
No 284
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=43.09 E-value=13 Score=31.70 Aligned_cols=17 Identities=24% Similarity=0.341 Sum_probs=15.0
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
-|.||=|+||||+.++.
T Consensus 530 ~kIVISDIDGTITKSDv 546 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDV 546 (738)
T ss_pred CcEEEecCCCceEhhhh
Confidence 47899999999999874
No 285
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=42.19 E-value=74 Score=20.47 Aligned_cols=63 Identities=5% Similarity=0.029 Sum_probs=31.8
Q ss_pred HHHHhhccCcE--EEecCChH---------HHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 97 NLLCSITQRKI--IFTNSDRN---------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 97 ~~l~~l~~~g~--i~t~~~~~---------~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
+-+..|++.|+ |+.+.+.. ..+...+.+|+. |++.-+.+. .+.++-+..
T Consensus 18 ~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~-y~~iPv~~~-------------------~~~~~~v~~ 77 (110)
T PF04273_consen 18 EDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQ-YVHIPVDGG-------------------AITEEDVEA 77 (110)
T ss_dssp HHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-E-EEE----TT-------------------T--HHHHHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCe-EEEeecCCC-------------------CCCHHHHHH
Confidence 45668888999 88876441 244567788883 333333322 444566666
Q ss_pred HHHHcCCCCCceEE
Q 029593 166 ALHVANVDPRHAVR 179 (191)
Q Consensus 166 ~~~~~~~~p~~~i~ 179 (191)
..+.+.-.|..+++
T Consensus 78 f~~~l~~~~~Pvl~ 91 (110)
T PF04273_consen 78 FADALESLPKPVLA 91 (110)
T ss_dssp HHHHHHTTTTSEEE
T ss_pred HHHHHHhCCCCEEE
Confidence 66665544555554
No 286
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=41.80 E-value=1.5e+02 Score=22.17 Aligned_cols=11 Identities=0% Similarity=0.011 Sum_probs=5.6
Q ss_pred HHHHHHHHHHc
Q 029593 160 MDAMKLALHVA 170 (191)
Q Consensus 160 ~~~~~~~~~~~ 170 (191)
|..++.+++.+
T Consensus 107 p~~I~~~~~~L 117 (247)
T COG1212 107 PEVIRAVAENL 117 (247)
T ss_pred HHHHHHHHHHH
Confidence 45555555544
No 287
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=41.59 E-value=21 Score=21.52 Aligned_cols=16 Identities=31% Similarity=0.243 Sum_probs=13.2
Q ss_pred eEEEEecCCCCCCChH
Q 029593 6 NCLVFDLDDTLYPSET 21 (191)
Q Consensus 6 k~iifD~DGTL~~~~~ 21 (191)
-.++++-|||.++.+.
T Consensus 41 ~~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 41 VRLVLEEDGTEVDDEE 56 (78)
T ss_dssp CEEEETTTTCBESSCH
T ss_pred cEEEEeCCCcEEccHH
Confidence 3578899999999774
No 288
>PLN02887 hydrolase family protein
Probab=40.92 E-value=53 Score=28.03 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=32.9
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
-.+.+..++++.+++++|+ ++|+.+...+...++.+++.
T Consensus 324 ~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 324 SQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 3577889999999999998 88888888888888888764
No 289
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=40.91 E-value=36 Score=19.83 Aligned_cols=24 Identities=25% Similarity=0.205 Sum_probs=19.7
Q ss_pred HHHHHHHHHcCCCCCceEEecCcc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSFL 184 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs~ 184 (191)
.++...|.+.|+.+.+++.|||=.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T TIGR03595 43 LGVEDALRKAGAKDGDTVRIGDFE 66 (69)
T ss_pred CCHHHHHHHcCCCCCCEEEEccEE
Confidence 356778888999999999999744
No 290
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=40.59 E-value=33 Score=23.76 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=20.1
Q ss_pred CceEEEEecCCCCCCChH-HHHHHHHHHHHH
Q 029593 4 PFNCLVFDLDDTLYPSET-GIAAAVKRNIEG 33 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~ 33 (191)
.+|+++||=|++|.-... .+.....+.+++
T Consensus 42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~ 72 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIER 72 (190)
T ss_pred CceEEEEcCCCeeeCCcccccCchhHHHHHH
Confidence 589999999999986543 344444443333
No 291
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=40.55 E-value=1.1e+02 Score=20.50 Aligned_cols=66 Identities=6% Similarity=0.095 Sum_probs=37.2
Q ss_pred CCCCCccchhhhhhcCCC----CCC--CCCChhHHHHHHhhccCcE----EEecCC----hHH---HHHHHhhcCCCccc
Q 029593 68 GYDIGADDYHGFVHGRLP----YDL--IKPDPQLRNLLCSITQRKI----IFTNSD----RNH---AITCLKRLEIADCF 130 (191)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~l~~l~~~g~----i~t~~~----~~~---~~~~l~~~~l~~~f 130 (191)
+...+++++.+...+.-. .+. ..-.+.++++++.|+++|. ++-++. .+. .+..++.+|+
T Consensus 36 G~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv---- 111 (134)
T TIGR01501 36 GVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF---- 111 (134)
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC----
Confidence 445556666665533211 111 3445678888888888875 545553 222 2456788775
Q ss_pred ceeeecc
Q 029593 131 DQIICFE 137 (191)
Q Consensus 131 ~~i~~~~ 137 (191)
+.+|+..
T Consensus 112 ~~vF~pg 118 (134)
T TIGR01501 112 DRVFAPG 118 (134)
T ss_pred CEEECcC
Confidence 6666643
No 292
>smart00455 RBD Raf-like Ras-binding domain.
Probab=40.00 E-value=31 Score=20.15 Aligned_cols=25 Identities=28% Similarity=0.306 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEe
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~i 180 (191)
+++-.+++..++++.|+.|+.+...
T Consensus 19 g~tl~e~L~~~~~kr~l~~~~~~v~ 43 (70)
T smart00455 19 GKTVRDALAKALKKRGLNPECCVVR 43 (70)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEE
Confidence 3667899999999999999988776
No 293
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=38.62 E-value=97 Score=24.24 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=28.3
Q ss_pred hHHHHHHhhccC---cE--EEecCChHHHHHHHhhcCCCcccceee
Q 029593 94 QLRNLLCSITQR---KI--IFTNSDRNHAITCLKRLEIADCFDQII 134 (191)
Q Consensus 94 ~~~~~l~~l~~~---g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~ 134 (191)
-+..++.+|++. +. ++|+........+++.+++...++..+
T Consensus 15 ~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~ 60 (365)
T TIGR00236 15 KMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNI 60 (365)
T ss_pred HHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeec
Confidence 456778888775 33 888888877888887788864344334
No 294
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=37.97 E-value=72 Score=27.83 Aligned_cols=37 Identities=8% Similarity=0.060 Sum_probs=30.8
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~ 127 (191)
..+...+.+..|+++|+ ++|+.+...+....+.+++.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44677899999999997 88888888888888888874
No 295
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=37.71 E-value=64 Score=22.42 Aligned_cols=43 Identities=12% Similarity=0.023 Sum_probs=33.5
Q ss_pred CCChhHHHHHHhhccCcE----EEecCChHHHHHHHhhcCCCcccce
Q 029593 90 KPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQ 132 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~~~l~~~f~~ 132 (191)
.-.||.++-.++|+++|+ ++|-.+.-.+..+.+.++....+..
T Consensus 62 ~HvPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~~~V~f 108 (171)
T KOG0541|consen 62 SHVPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGANDHVKF 108 (171)
T ss_pred ccCchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCccceEEE
Confidence 456999999999999998 6777777778888888876554444
No 296
>KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]
Probab=36.47 E-value=66 Score=21.73 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=40.1
Q ss_pred CCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH----HHH
Q 029593 90 KPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM----DAM 163 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~----~~~ 163 (191)
+....+..++++|++.|. ++--....+-..-++.-||.- .|.-+. + +. .|.+ +.+
T Consensus 25 PtnaTln~fieELkKygvttvVRVCe~TYdt~~lek~GI~V-ldw~f~--d-g~---------------ppp~qvv~~w~ 85 (173)
T KOG2836|consen 25 PTNATLNKFIEELKKYGVTTVVRVCEPTYDTTPLEKEGITV-LDWPFD--D-GA---------------PPPNQVVDDWL 85 (173)
T ss_pred CCchhHHHHHHHHHhcCCeEEEEecccccCCchhhhcCceE-eecccc--c-CC---------------CCchHHHHHHH
Confidence 445677888999999997 443333333333455555521 122221 1 11 2222 445
Q ss_pred HHHHHHcCCCCCceEEe
Q 029593 164 KLALHVANVDPRHAVRQ 180 (191)
Q Consensus 164 ~~~~~~~~~~p~~~i~i 180 (191)
+.+.-++...|+.|++|
T Consensus 86 ~l~~~~f~e~p~~cvav 102 (173)
T KOG2836|consen 86 SLVKTKFREEPGCCVAV 102 (173)
T ss_pred HHHHHHHhhCCCCeEEE
Confidence 56666788889988876
No 297
>PF14314 Methyltrans_Mon: Virus-capping methyltransferase
Probab=36.18 E-value=33 Score=29.67 Aligned_cols=23 Identities=17% Similarity=0.099 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCCCCCceEEecCc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSF 183 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs 183 (191)
.-++.+++.+++++..++++|||
T Consensus 310 YKlRsIL~~~~i~~~d~l~~GDG 332 (675)
T PF14314_consen 310 YKLRSILKNLNIKYRDALCGGDG 332 (675)
T ss_pred hhHHHHHHhcCCCcceeEEEecC
Confidence 34788999999999999999997
No 298
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=36.05 E-value=1e+02 Score=20.68 Aligned_cols=44 Identities=9% Similarity=0.142 Sum_probs=27.8
Q ss_pred CCChhHHHHHHhhccCcE----EEecCC-------hHHHHHHHhhcCCCcccceeeecc
Q 029593 90 KPDPQLRNLLCSITQRKI----IFTNSD-------RNHAITCLKRLEIADCFDQIICFE 137 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~----i~t~~~-------~~~~~~~l~~~~l~~~f~~i~~~~ 137 (191)
...+.+.++++.|++.+. ++-++. ....+..++.+|+ +.+|+..
T Consensus 66 ~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~----~~vf~~~ 120 (137)
T PRK02261 66 HGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF----DRVFPPG 120 (137)
T ss_pred cCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHHHHHHcCC----CEEECcC
Confidence 455788888888887743 333333 3445567788775 6666643
No 299
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=35.39 E-value=14 Score=26.15 Aligned_cols=24 Identities=21% Similarity=0.225 Sum_probs=18.5
Q ss_pred HHHHHHHHH---cCCCCCceEEecCcc
Q 029593 161 DAMKLALHV---ANVDPRHAVRQSSFL 184 (191)
Q Consensus 161 ~~~~~~~~~---~~~~p~~~i~iGDs~ 184 (191)
++++.+++. ++.++++++.+|||.
T Consensus 54 ~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 54 AAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred cceeeeccccccccccccceEEeeccc
Confidence 455555555 789999999999984
No 300
>cd01773 Faf1_like1_UBX Faf1 ike-1 UBX domain. Faf1_like1 is a protein of unknown function with a domain architecture that includes the UAS (ubiquitin-associated) and UBX (ubiquitin-like) domains. This protein is related to other UBA/UBX-containing proteins like Faf1, p47, and SAKS1 and may serve as an adaptor molecule that shuttles proteins to the proteasome for degradation. The UBX domain has a beta-grasp fold similar to that of ubiquitin however, UBX lacks the c-terminal double glycine motif and is thus unlikely to be conjugated to other proteins.
Probab=34.45 E-value=40 Score=20.52 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=16.2
Q ss_pred HHHHcCCCCCceEEecCc
Q 029593 166 ALHVANVDPRHAVRQSSF 183 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs 183 (191)
-++.+|+.|.++++|-|.
T Consensus 64 TL~e~GL~P~~~LfVq~r 81 (82)
T cd01773 64 TLQEAGLCPQETVFVQER 81 (82)
T ss_pred CHHHcCCCCCcEEEEecC
Confidence 578999999999999886
No 301
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=34.42 E-value=68 Score=21.35 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=25.3
Q ss_pred ChhHHHHHHhhccCcE----EEecC-ChHHHHHHHhhcCCCcccc
Q 029593 92 DPQLRNLLCSITQRKI----IFTNS-DRNHAITCLKRLEIADCFD 131 (191)
Q Consensus 92 ~~~~~~~l~~l~~~g~----i~t~~-~~~~~~~~l~~~~l~~~f~ 131 (191)
.+.+.++++.|+++|. ++-++ ........++.+|++.+|+
T Consensus 67 ~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~ 111 (132)
T TIGR00640 67 LTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAEIFG 111 (132)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCEEEC
Confidence 3567788888887653 44454 3444456688888855443
No 302
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=33.98 E-value=67 Score=27.68 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=39.8
Q ss_pred CCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCC-cccc-eeeeccc
Q 029593 88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIA-DCFD-QIICFET 138 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~-~~f~-~i~~~~~ 138 (191)
.+++.|++.++|+.+.+.-- |+|-+.+.++..+.+.+.-. .+|. .|++.+.
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 37889999999999997533 99999999999999887543 3554 4666654
No 303
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=33.85 E-value=2.1e+02 Score=21.56 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=21.8
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLI 185 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~ 185 (191)
-|.|..-+.+++.-|+ -|++|||++.
T Consensus 73 ~PGP~~ARE~l~~~~i---P~IvI~D~p~ 98 (277)
T PRK00994 73 APGPKKAREILKAAGI---PCIVIGDAPG 98 (277)
T ss_pred CCCchHHHHHHHhcCC---CEEEEcCCCc
Confidence 6778888999998888 4899999874
No 304
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=33.66 E-value=15 Score=21.85 Aligned_cols=9 Identities=44% Similarity=0.778 Sum_probs=8.2
Q ss_pred EEecCCCCC
Q 029593 9 VFDLDDTLY 17 (191)
Q Consensus 9 ifD~DGTL~ 17 (191)
=|||+|.++
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 305
>PF15214 PXT1: Peroxisomal testis-specific protein 1
Probab=33.65 E-value=15 Score=19.63 Aligned_cols=8 Identities=0% Similarity=-0.135 Sum_probs=6.5
Q ss_pred EecCcccc
Q 029593 179 RQSSFLIF 186 (191)
Q Consensus 179 ~iGDs~~~ 186 (191)
.||||+|.
T Consensus 5 ~iGDsinh 12 (51)
T PF15214_consen 5 HIGDSINH 12 (51)
T ss_pred cccccccH
Confidence 58999885
No 306
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=32.42 E-value=63 Score=24.34 Aligned_cols=36 Identities=6% Similarity=-0.090 Sum_probs=27.6
Q ss_pred CCChhHHHHHHhhcc-CcE---EEecCChHHHHHHHhhcC
Q 029593 90 KPDPQLRNLLCSITQ-RKI---IFTNSDRNHAITCLKRLE 125 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~-~g~---i~t~~~~~~~~~~l~~~~ 125 (191)
.+.+.+++.|..|++ .|+ ++|+.+...+...++.++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 456888889999987 564 889888888877776554
No 307
>PLN03190 aminophospholipid translocase; Provisional
Probab=30.76 E-value=62 Score=30.26 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=31.3
Q ss_pred CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCC
Q 029593 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEI 126 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l 126 (191)
++.+++.+.++.|+++|+ ++|+.....+..+....++
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence 788999999999999997 8888777777777766555
No 308
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=30.10 E-value=34 Score=27.40 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=15.7
Q ss_pred CceEEEEecCCCCCCChH
Q 029593 4 PFNCLVFDLDDTLYPSET 21 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~ 21 (191)
+.+.|.||=|+||++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~ 163 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGA 163 (408)
T ss_pred CceEEEEcCCcccccCCC
Confidence 689999999999998653
No 309
>PF02196 RBD: Raf-like Ras-binding domain; InterPro: IPR003116 This is the Ras-binding domain found in proteins related to Ras. It is found in association with the PE-bind and pkinase domains.; GO: 0005057 receptor signaling protein activity, 0007165 signal transduction; PDB: 1RFA_A 1C1Y_B 3KUD_B 1GUA_B 3KUC_B 2L05_A 3NY5_D 1RRB_A 1WFY_A 1WXM_A.
Probab=29.96 E-value=65 Score=18.82 Aligned_cols=25 Identities=16% Similarity=0.084 Sum_probs=20.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEe
Q 029593 156 LKPSMDAMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~~~i~i 180 (191)
+++-.+++..+|++.|+.|+.+.+.
T Consensus 20 g~ti~d~L~~~~~kr~L~~~~~~V~ 44 (71)
T PF02196_consen 20 GMTIRDALSKACKKRGLNPECCDVR 44 (71)
T ss_dssp TSBHHHHHHHHHHTTT--CCCEEEE
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEE
Confidence 4666899999999999999998876
No 310
>PRK10425 DNase TatD; Provisional
Probab=29.96 E-value=2.4e+02 Score=21.18 Aligned_cols=32 Identities=6% Similarity=0.088 Sum_probs=20.5
Q ss_pred CChhHHHHHHhhccCcE---EEecCChHHHHHHHh
Q 029593 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLK 122 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~ 122 (191)
..++..+++++.+++|+ ++++.+.+.....++
T Consensus 13 ~~~d~~~vl~~a~~~gv~~~i~~~~~~~~~~~~~~ 47 (258)
T PRK10425 13 FAKDRDDVVARAFAAGVNGMLITGTNLRESQQAQK 47 (258)
T ss_pred hhccHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHH
Confidence 34677888999988886 455555454444443
No 311
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=29.90 E-value=51 Score=25.94 Aligned_cols=69 Identities=13% Similarity=0.046 Sum_probs=38.0
Q ss_pred hhccC-cE----EEecCC--hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHc-CC
Q 029593 101 SITQR-KI----IFTNSD--RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA-NV 172 (191)
Q Consensus 101 ~l~~~-g~----i~t~~~--~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~-~~ 172 (191)
+|++. ++ ++|+.. ..+...+.+.+++ ...+.....+.... .+--..++..+.+.+ ..
T Consensus 2 ~l~~~~~~~~~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 66 (346)
T PF02350_consen 2 ALQKDPGFELILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDSQSM--------------AKSTGLAIIELADVLERE 66 (346)
T ss_dssp HHHCSTTEEEEEEEECSS--CHHHHHHHHHTT---SEEEE--STTS-H--------------HHHHHHHHHHHHHHHHHH
T ss_pred hhhhCCCCCEEEEEeCCCCCHHHHHHHHhhCCC-CCCCcccccccchH--------------HHHHHHHHHHHHHHHHhc
Confidence 45554 54 888877 6777778887777 56666666443111 122233334433333 25
Q ss_pred CCCceEEecCcc
Q 029593 173 DPRHAVRQSSFL 184 (191)
Q Consensus 173 ~p~~~i~iGDs~ 184 (191)
+|+=+++.||+.
T Consensus 67 ~Pd~Vlv~GD~~ 78 (346)
T PF02350_consen 67 KPDAVLVLGDRN 78 (346)
T ss_dssp T-SEEEEETTSH
T ss_pred CCCEEEEEcCCc
Confidence 899999999974
No 312
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=29.75 E-value=29 Score=28.90 Aligned_cols=17 Identities=24% Similarity=0.532 Sum_probs=14.5
Q ss_pred ceEEEEecCCCCCCChH
Q 029593 5 FNCLVFDLDDTLYPSET 21 (191)
Q Consensus 5 ~k~iifD~DGTL~~~~~ 21 (191)
-+++++|+||||+.+..
T Consensus 50 ~~t~v~d~~g~Ll~s~s 66 (525)
T PLN02588 50 NHTLIFNVEGALLKSNS 66 (525)
T ss_pred cceEEEecccceeccCC
Confidence 46799999999998764
No 313
>cd00153 RalGDS_RA Ubiquitin domain of RalGDS-like factor (RLF) and related proteins. This CD represents the C-terminal Ras-associating (RA) domain of three closely related guanine-nucleotide exchange factors (GEF's), Ral guanine nucleotide dissociation stimulator (RalGDS), RalGDS-like (RGL), and RalGDS-like factor (RLF). The RalGDS proteins are downstream effectors of the Ras-related protein Ral, providing a mechanism for Ral activation by extracellular signals. The RA domain is structurally similar to ubiquitin and exists in a number of other signalling proteins including AF6, rasfadin, SNX27, CYR1, and STE50.
Probab=29.65 E-value=98 Score=19.01 Aligned_cols=31 Identities=6% Similarity=0.187 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHcCCCCC--------------ceEEecCccccccc
Q 029593 159 SMDAMKLALHVANVDPR--------------HAVRQSSFLIFYFD 189 (191)
Q Consensus 159 ~~~~~~~~~~~~~~~p~--------------~~i~iGDs~~~~~~ 189 (191)
-|..+++++++++++.+ +-+.|-|+.|=|||
T Consensus 29 tP~VI~ral~Khnl~~~~~~~Y~L~Q~Lp~d~El~iP~~aNvfYA 73 (87)
T cd00153 29 APQVIRRAMEKHNLESEVAEDYELVQVLPGDRELVIPDNANVFYA 73 (87)
T ss_pred CHHHHHHHHHHhCCCcCCccceEEEEEcCCCceEeccCCCceEEE
Confidence 37999999999987543 45668888888776
No 314
>COG4344 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.61 E-value=67 Score=21.99 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=29.2
Q ss_pred CCChhHHHHHHhhccCcE--EEecCChHHHHHHHhh
Q 029593 90 KPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKR 123 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~ 123 (191)
.|.|-+++.++.|++-|. -.||++....+++++.
T Consensus 43 iPl~~i~e~l~dL~elGLier~tgttiKrteAKfKk 78 (175)
T COG4344 43 IPLPRIREYLKDLKELGLIERYTGTTIKRTEAKFKK 78 (175)
T ss_pred CChHHHHHHHHHHHHcCCeeeccCchhhhhHHHHHH
Confidence 577899999999999998 8889888888887765
No 315
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=28.46 E-value=88 Score=18.76 Aligned_cols=36 Identities=11% Similarity=0.021 Sum_probs=23.4
Q ss_pred HHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccc
Q 029593 95 LRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFD 131 (191)
Q Consensus 95 ~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~ 131 (191)
+.++...++++|. .+++. ...+...++..|+.+.+.
T Consensus 59 L~~l~~~~~~~g~~v~i~~~-~~~~~~~l~~~gl~~~~~ 96 (99)
T cd07043 59 LLGAYKRARAAGGRLVLVNV-SPAVRRVLELTGLDRLFP 96 (99)
T ss_pred HHHHHHHHHHcCCeEEEEcC-CHHHHHHHHHhCcceeee
Confidence 3455666667776 55544 457888888888866543
No 316
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=28.43 E-value=1e+02 Score=20.55 Aligned_cols=61 Identities=5% Similarity=0.033 Sum_probs=35.1
Q ss_pred CCCCCccchhhhhhcCCC----CCC--CCCChhHHHHHHhhccCcE----EEecCCh-------HHHHHHHhhcCCCc
Q 029593 68 GYDIGADDYHGFVHGRLP----YDL--IKPDPQLRNLLCSITQRKI----IFTNSDR-------NHAITCLKRLEIAD 128 (191)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~l~~l~~~g~----i~t~~~~-------~~~~~~l~~~~l~~ 128 (191)
+...+++++.+...+.-. .+. ..-.+.++++++.|+++|+ ++-++.. ...+..++.+|++.
T Consensus 34 G~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv~~ 111 (128)
T cd02072 34 GVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGFDR 111 (128)
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCCCE
Confidence 445566666665533211 111 2445778888888888875 4444431 33456788888844
No 317
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=28.37 E-value=1.6e+02 Score=21.40 Aligned_cols=13 Identities=38% Similarity=0.595 Sum_probs=10.8
Q ss_pred EEEEecCCCCCCC
Q 029593 7 CLVFDLDDTLYPS 19 (191)
Q Consensus 7 ~iifD~DGTL~~~ 19 (191)
+|++|+||||++.
T Consensus 1 li~~DlDgTLl~~ 13 (236)
T TIGR02471 1 LIITDLDNTLLGD 13 (236)
T ss_pred CeEEeccccccCC
Confidence 4789999999863
No 318
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=28.32 E-value=1.8e+02 Score=25.74 Aligned_cols=81 Identities=6% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHH--hhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCL--KRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (191)
Q Consensus 87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l--~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 161 (191)
....-..++..-|+.||.++. ++++.+-+..-... +..++......++++.-.. ..|..
T Consensus 708 ~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctP----------------tQKA~ 771 (1051)
T KOG0210|consen 708 RSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTP----------------TQKAQ 771 (1051)
T ss_pred EecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecCh----------------hHHHH
Q ss_pred HHHHHHHHcCCCCCceEEecCcccc
Q 029593 162 AMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+.+.+.++-+ .++.+||||=||
T Consensus 772 v~~llq~~t~---krvc~IGDGGND 793 (1051)
T KOG0210|consen 772 VVRLLQKKTG---KRVCAIGDGGND 793 (1051)
T ss_pred HHHHHHHhhC---ceEEEEcCCCcc
No 319
>PLN02151 trehalose-phosphatase
Probab=28.13 E-value=67 Score=25.53 Aligned_cols=14 Identities=36% Similarity=0.506 Sum_probs=12.0
Q ss_pred ceEEEEecCCCCCC
Q 029593 5 FNCLVFDLDDTLYP 18 (191)
Q Consensus 5 ~k~iifD~DGTL~~ 18 (191)
-.++++|+||||.+
T Consensus 98 ~~ll~lDyDGTL~P 111 (354)
T PLN02151 98 QIVMFLDYDGTLSP 111 (354)
T ss_pred ceEEEEecCccCCC
Confidence 46889999999994
No 320
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1.97.1.4 from EC) in UniProt. It is not clear where this annotation comes from.
Probab=27.72 E-value=2.1e+02 Score=21.68 Aligned_cols=31 Identities=13% Similarity=0.111 Sum_probs=23.1
Q ss_pred CChHHHHHHHhhcCCCcccc-eeeecccCCCC
Q 029593 112 SDRNHAITCLKRLEIADCFD-QIICFETMNPN 142 (191)
Q Consensus 112 ~~~~~~~~~l~~~~l~~~f~-~i~~~~~~~~~ 142 (191)
-+....+..+..++++-.++ ..++..+++..
T Consensus 60 ~D~~~~~~~l~~fg~~~p~~~vavAvQDHG~~ 91 (254)
T PF08735_consen 60 VDPEALRGALSAFGLELPFDVVAVAVQDHGFS 91 (254)
T ss_pred CCHHHHHHHHHHcCCCCCcceeEEEecccCCC
Confidence 34566777888888887777 67788888763
No 321
>PLN03017 trehalose-phosphatase
Probab=27.53 E-value=70 Score=25.57 Aligned_cols=29 Identities=17% Similarity=0.322 Sum_probs=18.6
Q ss_pred ceEEEEecCCCCC---C-ChH-HHHHHHHHHHHH
Q 029593 5 FNCLVFDLDDTLY---P-SET-GIAAAVKRNIEG 33 (191)
Q Consensus 5 ~k~iifD~DGTL~---~-~~~-~~~~~~~~~~~~ 33 (191)
--++++|+||||+ + .+. .+......++.+
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 4688899999999 3 332 344455555544
No 322
>PLN03190 aminophospholipid translocase; Provisional
Probab=27.14 E-value=36 Score=31.72 Aligned_cols=27 Identities=4% Similarity=-0.178 Sum_probs=16.8
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593 157 KPSMDAMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+-|..+.+.+.+.. ..-+++||||.||
T Consensus 857 ~QKa~IV~~vk~~~---~~vtlaIGDGaND 883 (1178)
T PLN03190 857 LQKAGIVALVKNRT---SDMTLAIGDGAND 883 (1178)
T ss_pred HHHHHHHHHHHhcC---CcEEEEECCCcch
Confidence 33444444443332 3468999999998
No 323
>PRK10344 DNA-binding transcriptional regulator Nlp; Provisional
Probab=26.83 E-value=33 Score=21.24 Aligned_cols=22 Identities=14% Similarity=0.126 Sum_probs=19.3
Q ss_pred CCCHHHHHHHHHHcCCCCCceE
Q 029593 157 KPSMDAMKLALHVANVDPRHAV 178 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i 178 (191)
+|.|.+=+.+++.+|+.|++++
T Consensus 44 rp~PKgEriIA~aLGv~P~eIW 65 (92)
T PRK10344 44 RPWPKGEMIIAKALGTDPWVIW 65 (92)
T ss_pred CCCchHHHHHHHHHCcCHHHhC
Confidence 7778888899999999998876
No 324
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=26.50 E-value=89 Score=24.41 Aligned_cols=27 Identities=26% Similarity=0.329 Sum_probs=22.6
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN 115 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~ 115 (191)
..++|.+.++++.++++|+ +.||+...
T Consensus 141 PlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 141 PTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred ccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 4567899999999999997 89998653
No 325
>PF14213 DUF4325: Domain of unknown function (DUF4325)
Probab=26.29 E-value=1.4e+02 Score=17.35 Aligned_cols=24 Identities=13% Similarity=0.153 Sum_probs=14.9
Q ss_pred eEEEEecCCCCCCChHHHHHHHHH
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKR 29 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~ 29 (191)
+.|.+|++|+-.-+......++..
T Consensus 18 ~~V~lDF~gv~~~~ssFl~eafg~ 41 (74)
T PF14213_consen 18 EKVVLDFEGVESITSSFLNEAFGQ 41 (74)
T ss_pred CeEEEECCCcccccHHHHHHHHHH
Confidence 459999999955444333344444
No 326
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=26.26 E-value=27 Score=23.12 Aligned_cols=14 Identities=14% Similarity=0.183 Sum_probs=12.1
Q ss_pred CceEEEEecCCCCC
Q 029593 4 PFNCLVFDLDDTLY 17 (191)
Q Consensus 4 ~~k~iifD~DGTL~ 17 (191)
.+..+.||+.+||-
T Consensus 44 ~P~iV~FDmK~Tld 57 (128)
T PRK13717 44 APVTAAFNMKQTVD 57 (128)
T ss_pred CCeEEEEehHHHHH
Confidence 46899999999984
No 327
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=26.21 E-value=44 Score=24.00 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=11.7
Q ss_pred eEEEEecCCCCCCC
Q 029593 6 NCLVFDLDDTLYPS 19 (191)
Q Consensus 6 k~iifD~DGTL~~~ 19 (191)
..|-||+|||+.--
T Consensus 59 ~~v~~D~~GT~m~i 72 (271)
T PF06901_consen 59 HTVTFDFQGTKMVI 72 (271)
T ss_pred eeEEEeccceEEEe
Confidence 57999999999754
No 328
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=26.09 E-value=75 Score=25.01 Aligned_cols=34 Identities=18% Similarity=0.311 Sum_probs=27.1
Q ss_pred hhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCC
Q 029593 93 PQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEI 126 (191)
Q Consensus 93 ~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l 126 (191)
.=.+.++.+|+++|+ ++|..+...+...++.+|+
T Consensus 14 hfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~ 49 (335)
T PF04007_consen 14 HFFKNIIRELEKRGHEVLITARDKDETEELLDLYGI 49 (335)
T ss_pred HHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCC
Confidence 345677888888887 7888888888888888877
No 329
>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis]
Probab=26.02 E-value=4e+02 Score=23.25 Aligned_cols=81 Identities=10% Similarity=0.057 Sum_probs=54.5
Q ss_pred CChhHHHHHHhhccCcE----EEecCChHHHHHHHhhcCCCcccce-eeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593 91 PDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (191)
Q Consensus 91 ~~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~~~l~~~f~~-i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 165 (191)
-.|-+.-.|+.|..+|+ +++++....+..-++...+...++. +.+..... .+.-+++++.
T Consensus 54 NVpmIdYtL~~L~~agV~eVfvfc~~~~~qi~e~i~~sew~~~~~~~v~ti~s~~---------------~~S~GDamR~ 118 (673)
T KOG1461|consen 54 NVPMIDYTLEWLERAGVEEVFVFCSAHAAQIIEYIEKSEWYLPMSFIVVTICSGE---------------SRSVGDAMRD 118 (673)
T ss_pred CchHHHHHHHHHHhcCceEEEEEecccHHHHHHHHhhccccccccceEEEEcCCC---------------cCcHHHHHHH
Confidence 34777788999999998 7777777777777777555544442 22222211 2556788888
Q ss_pred HHHHcCCCCCceEEecCcccc
Q 029593 166 ALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 166 ~~~~~~~~p~~~i~iGDs~~~ 186 (191)
+=++.=++-+=+++-||....
T Consensus 119 id~k~litgDFiLVsgd~vsN 139 (673)
T KOG1461|consen 119 IDEKQLITGDFILVSGDTVSN 139 (673)
T ss_pred HHhcceeecceEEEeCCeeec
Confidence 888766676777777777654
No 330
>COG1872 Uncharacterized conserved protein [Function unknown]
Probab=26.01 E-value=1.4e+02 Score=19.10 Aligned_cols=29 Identities=17% Similarity=0.033 Sum_probs=23.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCceEEe
Q 029593 152 FPVLLKPSMDAMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~i 180 (191)
+...||-+.+.+..+.+.++++.++|..+
T Consensus 45 pP~~GKAN~~li~~Lak~~~v~kS~V~iv 73 (102)
T COG1872 45 PPVDGKANEELIKFLAKTFGVPKSSVEIV 73 (102)
T ss_pred CCCCcchhHHHHHHHHHHhCCCcccEEEE
Confidence 44557999999999999999987766544
No 331
>COG3423 Nlp Predicted transcriptional regulator [Transcription]
Probab=25.97 E-value=31 Score=20.66 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=18.3
Q ss_pred CCCHHHHHHHHHHcCCCCCceE
Q 029593 157 KPSMDAMKLALHVANVDPRHAV 178 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i 178 (191)
+|-|-+=+.+++.+|++|++++
T Consensus 44 rp~pkgEriIA~algv~P~eIW 65 (82)
T COG3423 44 RPWPKGERIIADALGVPPEEIW 65 (82)
T ss_pred CCCchHHHHHHHHhCCCHHHhC
Confidence 6667777888999999999876
No 332
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=25.89 E-value=1e+02 Score=21.89 Aligned_cols=25 Identities=8% Similarity=-0.031 Sum_probs=13.1
Q ss_pred HHHHHHHHcCCCCCceEEecCcccc
Q 029593 162 AMKLALHVANVDPRHAVRQSSFLIF 186 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iGDs~~~ 186 (191)
.-..-+.++|++++++...|+--.|
T Consensus 159 ~da~r~~~lG~~~~~v~v~GnlKfd 183 (186)
T PF04413_consen 159 ADAERFRKLGAPPERVHVTGNLKFD 183 (186)
T ss_dssp HHHHHHHTTT-S--SEEE---GGG-
T ss_pred HHHHHHHHcCCCcceEEEeCcchhc
Confidence 4455677889999999999985443
No 333
>PF03612 EIIBC-GUT_N: Sorbitol phosphotransferase enzyme II N-terminus; InterPro: IPR011618 Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The Gut family consists only of glucitol-specific permeases, but these occur both in Gram-negative and Gram-positive bacteria. Escherichia coli consists of IIA protein, a IIC protein and a IIBC protein. This entry represents the N-terminal conserved region of the IIBC component.; GO: 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=25.37 E-value=44 Score=23.67 Aligned_cols=13 Identities=38% Similarity=0.680 Sum_probs=11.1
Q ss_pred ceEEEEecCCCCC
Q 029593 5 FNCLVFDLDDTLY 17 (191)
Q Consensus 5 ~k~iifD~DGTL~ 17 (191)
+-+++.||.|||=
T Consensus 63 i~~vVIDCGGTlR 75 (183)
T PF03612_consen 63 IACVVIDCGGTLR 75 (183)
T ss_pred eEEEEEecCCcee
Confidence 5689999999983
No 334
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=24.79 E-value=1.5e+02 Score=17.04 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=16.7
Q ss_pred eEEEEecCCCCCCChHHHHHHHHH
Q 029593 6 NCLVFDLDDTLYPSETGIAAAVKR 29 (191)
Q Consensus 6 k~iifD~DGTL~~~~~~~~~~~~~ 29 (191)
.-|+||=|+.-+++....+ ++.+
T Consensus 25 s~iiFDNded~tdSa~llp-~ie~ 47 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSAALLP-AIEQ 47 (65)
T ss_pred CCeeecCCCcccchHHHHH-HHHH
Confidence 4689999999999975443 4443
No 335
>COG3655 Predicted transcriptional regulator [Transcription]
Probab=24.78 E-value=1.1e+02 Score=18.19 Aligned_cols=24 Identities=4% Similarity=0.091 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCCCCceEEecCc
Q 029593 160 MDAMKLALHVANVDPRHAVRQSSF 183 (191)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~i~iGDs 183 (191)
-..+..+|+.+.++|.+++-+-+.
T Consensus 45 ~~tL~~iC~~LeCqpgDiley~~d 68 (73)
T COG3655 45 LSTLEKICKALECQPGDILEYVPD 68 (73)
T ss_pred HHHHHHHHHHcCCChhheeEEecC
Confidence 477899999999999999987443
No 336
>PF03603 DNA_III_psi: DNA polymerase III psi subunit; InterPro: IPR004615 DNA-directed DNA polymerase (2.7.7.7 from EC) catalyzes DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The enzyme also has 3' to 5' exonuclease activity. It has a core composed of alpha, epsilon and theta chains, that associate with a tau subunit which allows the core dimerization to form the PolIII' complex. PolIII' associates with the gamma complex (gamma, delta, delta', psi and chi chains) and with the beta chain. This family is the psi subunit, the small subunit of the DNA polymerase III holoenzyme in Escherichia coli and related species, whose exact function is not known. It appears to have a narrow taxonomic distribution, being restricted to the gammaproteobacteria.; GO: 0003887 DNA-directed DNA polymerase activity, 0008408 3'-5' exonuclease activity, 0006260 DNA replication; PDB: 1EM8_B 3GLI_O 3SXU_B.
Probab=24.59 E-value=1.4e+02 Score=19.81 Aligned_cols=19 Identities=11% Similarity=0.232 Sum_probs=16.1
Q ss_pred HHHHHHHHcCCCCCceEEe
Q 029593 162 AMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~i 180 (191)
.+..+++.++++++++.++
T Consensus 53 L~~dVLrsl~L~~~q~~~l 71 (128)
T PF03603_consen 53 LFQDVLRSLKLTPEQVLHL 71 (128)
T ss_dssp HHHHHHHHTT--GGGEEEE
T ss_pred HHHHHHHHcCCCHHHhhcc
Confidence 9999999999999999986
No 337
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=24.56 E-value=33 Score=25.86 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=12.9
Q ss_pred EEEEecCCCCCCChH
Q 029593 7 CLVFDLDDTLYPSET 21 (191)
Q Consensus 7 ~iifD~DGTL~~~~~ 21 (191)
-|+||.|+||++.+.
T Consensus 123 RIAFDgDaVLfsDes 137 (264)
T PF06189_consen 123 RIAFDGDAVLFSDES 137 (264)
T ss_pred EEEEcCCeEeecCcc
Confidence 479999999998765
No 338
>PF13443 HTH_26: Cro/C1-type HTH DNA-binding domain; PDB: 3TYR_A 3TYS_A 3B7H_A.
Probab=24.40 E-value=22 Score=19.76 Aligned_cols=23 Identities=22% Similarity=0.437 Sum_probs=15.7
Q ss_pred CCCHHHHHHHHHHcCCCCCceEE
Q 029593 157 KPSMDAMKLALHVANVDPRHAVR 179 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i~ 179 (191)
.|...-+..+++.+|++|++.+-
T Consensus 37 ~~~~~~l~~ia~~l~~~~~el~~ 59 (63)
T PF13443_consen 37 NPSLDTLEKIAKALNCSPEELFE 59 (63)
T ss_dssp ---HHHHHHHHHHHT--HHHCTE
T ss_pred cccHHHHHHHHHHcCCCHHHHhh
Confidence 77889999999999999887653
No 339
>PF13319 DUF4090: Protein of unknown function (DUF4090)
Probab=23.82 E-value=1.7e+02 Score=17.50 Aligned_cols=13 Identities=31% Similarity=0.440 Sum_probs=10.5
Q ss_pred EEecCCCCCCChH
Q 029593 9 VFDLDDTLYPSET 21 (191)
Q Consensus 9 ifD~DGTL~~~~~ 21 (191)
-.|+|||-++...
T Consensus 12 GiDlDGspIP~~~ 24 (84)
T PF13319_consen 12 GIDLDGSPIPPAM 24 (84)
T ss_pred CcCCCCCcCCHHH
Confidence 3699999998764
No 340
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=23.59 E-value=1.2e+02 Score=18.18 Aligned_cols=29 Identities=14% Similarity=0.028 Sum_probs=21.8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCceEE
Q 029593 151 EFPVLLKPSMDAMKLALHVANVDPRHAVR 179 (191)
Q Consensus 151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~ 179 (191)
.+...+|-+.+.++.+.+.|+++..++-.
T Consensus 34 app~~GkAN~ali~~La~~l~v~ks~i~i 62 (77)
T PF02594_consen 34 APPVDGKANKALIRFLAKALGVPKSDIEI 62 (77)
T ss_dssp TTCCCCCHHHHHHHHHHHHCT--TTCEEE
T ss_pred cCCCcChhHHHHHHHHHHHhCCCcccEEE
Confidence 35556788899999999999999887654
No 341
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=23.51 E-value=1.5e+02 Score=17.79 Aligned_cols=22 Identities=9% Similarity=0.096 Sum_probs=16.5
Q ss_pred CCCHHHHHHHHHHcCCCCCceE
Q 029593 157 KPSMDAMKLALHVANVDPRHAV 178 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i 178 (191)
.++..+++.+++.++++++++.
T Consensus 18 q~~~~~~~~~~~~lgi~~~~~~ 39 (90)
T PF08541_consen 18 QASKKILDSIAKRLGIPPERFP 39 (90)
T ss_dssp SSSHHHHHHHHHHHTS-GGGBE
T ss_pred CCCHHHHHHHHHHcCCcHHHHH
Confidence 5556788888889999888765
No 342
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=22.91 E-value=1.5e+02 Score=19.08 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=20.8
Q ss_pred HHHHHHHHHcCCCCCceEEecCcccccccc
Q 029593 161 DAMKLALHVANVDPRHAVRQSSFLIFYFDF 190 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~~~~ 190 (191)
.-+..+++.+|++-=+-+.||+ +.||.|
T Consensus 85 ~~l~~~~~~l~i~llDHiIi~~--~~~~S~ 112 (113)
T cd08071 85 KRLKEAGELLGIRLLDHIIVGD--GGYFSF 112 (113)
T ss_pred HHHHHHHHHCCCEEeeEEEEcC--CcEEEe
Confidence 3467777889999888888886 556554
No 343
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed
Probab=22.81 E-value=1e+02 Score=23.64 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHcCCCCCceEEecCc
Q 029593 159 SMDAMKLALHVANVDPRHAVRQSSF 183 (191)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~i~iGDs 183 (191)
-...+..++.+++++|+++++|+|.
T Consensus 28 il~~l~~al~~l~~~p~d~vvvsdi 52 (286)
T PRK11867 28 ILAALQRALAELGLDPENVAVVSGI 52 (286)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCC
Confidence 5789999999999999999998875
No 344
>PF12844 HTH_19: Helix-turn-helix domain; PDB: 3LIS_B 3LFP_A 2XIU_B 2GZU_B 2XJ3_A 1UTX_A 2XI8_B 3F6W_C 3EUS_B.
Probab=22.74 E-value=33 Score=19.12 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=15.9
Q ss_pred CCCHHHHHHHHHHcCCCCCce
Q 029593 157 KPSMDAMKLALHVANVDPRHA 177 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~ 177 (191)
.|.+..+..+++.++++++..
T Consensus 38 ~~~~~~l~~i~~~~~v~~~~l 58 (64)
T PF12844_consen 38 KPSVSTLKKIAEALGVSLDEL 58 (64)
T ss_dssp --BHHHHHHHHHHHTS-HHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHH
Confidence 888999999999999987654
No 345
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=22.70 E-value=2.5e+02 Score=20.79 Aligned_cols=54 Identities=9% Similarity=0.113 Sum_probs=33.9
Q ss_pred CCCCChhHHHHHHhhccCcE------EEecCC----hHHHHHHH---hhcCCC-cccceeeecccCCC
Q 029593 88 LIKPDPQLRNLLCSITQRKI------IFTNSD----RNHAITCL---KRLEIA-DCFDQIICFETMNP 141 (191)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~g~------i~t~~~----~~~~~~~l---~~~~l~-~~f~~i~~~~~~~~ 141 (191)
.+.-.|.+.++++.++++|- ++|.+. .+++...+ +..|+. -+++.+..+.++.+
T Consensus 9 ~~~~n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~gv~~V~vH~f~DGRDt~P 76 (223)
T PF06415_consen 9 SFFKNPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQGVKKVYVHAFTDGRDTPP 76 (223)
T ss_dssp GGGTSHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT-SEEEEEEEE-SSSS-T
T ss_pred CcccCHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcCCCEEEEEEecCCCCCCc
Confidence 35567888999999998642 888854 34444443 445776 35888898888765
No 346
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=22.40 E-value=2.4e+02 Score=18.77 Aligned_cols=27 Identities=15% Similarity=0.331 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHcCCCCC-ceEEecC
Q 029593 156 LKPSMDAMKLALHVANVDPR-HAVRQSS 182 (191)
Q Consensus 156 ~kp~~~~~~~~~~~~~~~p~-~~i~iGD 182 (191)
..|.++-++..++.+|++++ .+|+.++
T Consensus 76 ~~p~~~~~~~~~~~~GI~~~~~vVvY~~ 103 (138)
T cd01445 76 MEPSEAEFAAMFEAKGIDLDKHLIATDG 103 (138)
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 46677899999999999876 5555554
No 347
>PRK14129 heat shock protein HspQ; Provisional
Probab=21.93 E-value=88 Score=19.98 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=14.1
Q ss_pred CceEEEEecCCCCCCCh
Q 029593 4 PFNCLVFDLDDTLYPSE 20 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~ 20 (191)
.++.|+||+|-+--.++
T Consensus 18 ~yrGVV~DVDP~fs~~e 34 (105)
T PRK14129 18 GYLGVVVDIDPEYSLEE 34 (105)
T ss_pred CCCeEEEeeCCCcCCCc
Confidence 58899999998887666
No 348
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=21.65 E-value=4.3e+02 Score=21.22 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=17.9
Q ss_pred CCChhHHHHHHhhccCcEEEec
Q 029593 90 KPDPQLRNLLCSITQRKIIFTN 111 (191)
Q Consensus 90 ~~~~~~~~~l~~l~~~g~i~t~ 111 (191)
+..++..++++.|+++|+++|-
T Consensus 174 PE~~~~~~~i~~l~~~gi~vs~ 195 (380)
T TIGR00221 174 PEEDQHFELIRHLKDAGIIVSA 195 (380)
T ss_pred CCCCChHHHHHHHHHCCeEEEe
Confidence 4468899999999999995553
No 349
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=21.64 E-value=98 Score=23.65 Aligned_cols=23 Identities=13% Similarity=0.105 Sum_probs=17.4
Q ss_pred HHHHHHH---HcCCCCCceEEecCcc
Q 029593 162 AMKLALH---VANVDPRHAVRQSSFL 184 (191)
Q Consensus 162 ~~~~~~~---~~~~~p~~~i~iGDs~ 184 (191)
+++.+.+ ++|++|+++++.|||.
T Consensus 136 a~~~l~~~~~~~g~dp~~i~v~GdSA 161 (312)
T COG0657 136 AYRWLRANAAELGIDPSRIAVAGDSA 161 (312)
T ss_pred HHHHHHhhhHhhCCCccceEEEecCc
Confidence 4444443 3789999999999984
No 350
>PRK13663 hypothetical protein; Provisional
Probab=21.52 E-value=3.1e+02 Score=22.64 Aligned_cols=58 Identities=22% Similarity=0.211 Sum_probs=39.3
Q ss_pred CCCChhHHHHHHhhccCcE-----EEecCCh----HHHHHHHhhcCCCcc-----------cceeeecccCCCCCCCC
Q 029593 89 IKPDPQLRNLLCSITQRKI-----IFTNSDR----NHAITCLKRLEIADC-----------FDQIICFETMNPNLSKA 146 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~-----i~t~~~~----~~~~~~l~~~~l~~~-----------f~~i~~~~~~~~~~~~~ 146 (191)
+....++..+++.+++.|+ |+|-... ...+..|+++|+..+ ++.|++-+-.+...|..
T Consensus 88 ItYd~dVLRLiD~fr~~gl~V~sVVITqy~~qp~a~~F~~rLe~~GIkvy~Hy~i~GYP~dv~~IVSdeGyGkN~yIe 165 (493)
T PRK13663 88 ITYDQDVLRLIDDFRELGLYVGSVVITQYDGQPAADAFRNRLERLGIKVYRHYPIKGYPTDVDHIVSDEGYGKNDYIE 165 (493)
T ss_pred CchhHHHHHHHHHHHhcCceeeeEEEEecCCChHHHHHHHHHHHCCCceEEecCcCCCCCCCCceECcCCCCCCCcee
Confidence 5667899999999999987 6665332 346667888888755 34466656566554543
No 351
>PF14026 DUF4242: Protein of unknown function (DUF4242)
Probab=21.45 E-value=1.5e+02 Score=17.67 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=20.1
Q ss_pred CCCHHHHHHHHHHcCCCCCceE
Q 029593 157 KPSMDAMKLALHVANVDPRHAV 178 (191)
Q Consensus 157 kp~~~~~~~~~~~~~~~p~~~i 178 (191)
-|+++.++...++-|++++++.
T Consensus 54 Ap~~eaV~~~~~~aG~p~d~I~ 75 (77)
T PF14026_consen 54 APDEEAVREHARRAGLPADRIT 75 (77)
T ss_pred CCCHHHHHHHHHHcCCCcceEE
Confidence 8899999999999999998875
No 352
>PF08013 Tagatose_6_P_K: Tagatose 6 phosphate kinase; InterPro: IPR012062 Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases [, ]. However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity []. It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ [] and other members of this family turned out to be erroneous [, ].; GO: 0019402 galactitol metabolic process; PDB: 2FIQ_A 3TXV_A.
Probab=21.27 E-value=3e+02 Score=22.54 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=36.0
Q ss_pred CcE-EEecCChHHHHHHHhhcCCCcccceee--ecccCCC-CCCCCCCCCCCCCCCCCC--HHHHHHHHHHcCCCCCceE
Q 029593 105 RKI-IFTNSDRNHAITCLKRLEIADCFDQII--CFETMNP-NLSKATRPDEFPVLLKPS--MDAMKLALHVANVDPRHAV 178 (191)
Q Consensus 105 ~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~--~~~~~~~-~~~~~~~~~~~~~~~kp~--~~~~~~~~~~~~~~p~~~i 178 (191)
.|+ -+++.+...++..+++..-.+ ....| +++.++. +-|+++ +|. .+.+..++++.|++.++++
T Consensus 17 ~gI~SVCsahp~VieAAl~~a~~~~-~pvLiEAT~NQVnq~GGYTGm---------tP~dF~~~V~~iA~~~g~~~~~ii 86 (424)
T PF08013_consen 17 VGIYSVCSAHPLVIEAALERAKEDD-SPVLIEATSNQVNQFGGYTGM---------TPADFRDFVREIADEVGFPRDRII 86 (424)
T ss_dssp B-EEEE----HHHHHHHHHHCCCS--S-EEEEEETTTCSTT-TTTTB----------HHHHHHHHHHHHHHCT--GGGEE
T ss_pred CceEEecCCCHHHHHHHHHHHHhcC-CeEEEEeccccccccCCcCCC---------CHHHHHHHHHHHHHHcCCchhhEE
Confidence 355 444567777888877754333 22222 2232221 223333 443 3667888899999999999
Q ss_pred EecCcc
Q 029593 179 RQSSFL 184 (191)
Q Consensus 179 ~iGDs~ 184 (191)
.-||.+
T Consensus 87 LGGDHL 92 (424)
T PF08013_consen 87 LGGDHL 92 (424)
T ss_dssp EEEEEE
T ss_pred ecCCCC
Confidence 999964
No 353
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=21.25 E-value=99 Score=26.61 Aligned_cols=17 Identities=6% Similarity=-0.081 Sum_probs=15.1
Q ss_pred HHcCCCCCceEEecCcc
Q 029593 168 HVANVDPRHAVRQSSFL 184 (191)
Q Consensus 168 ~~~~~~p~~~i~iGDs~ 184 (191)
..+|.+.|+++++|||.
T Consensus 462 allG~TgEriv~aGDSA 478 (880)
T KOG4388|consen 462 ALLGSTGERIVLAGDSA 478 (880)
T ss_pred HHhCcccceEEEeccCC
Confidence 56789999999999985
No 354
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.98 E-value=65 Score=28.79 Aligned_cols=18 Identities=33% Similarity=0.495 Sum_probs=16.0
Q ss_pred CceEEEEecCCCCCCChH
Q 029593 4 PFNCLVFDLDDTLYPSET 21 (191)
Q Consensus 4 ~~k~iifD~DGTL~~~~~ 21 (191)
+.++++||-.|||+....
T Consensus 516 ~v~~v~fDKTGTLT~g~~ 533 (834)
T PRK10671 516 TLDTLVFDKTGTLTEGKP 533 (834)
T ss_pred CCCEEEEcCCCccccCce
Confidence 689999999999998764
No 355
>PF04787 Pox_H7: Late protein H7; InterPro: IPR006872 This is a family of poxvirus late H7 proteins.
Probab=20.90 E-value=1.3e+02 Score=20.51 Aligned_cols=31 Identities=29% Similarity=0.399 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCCCCCceEE-ecCcccccccc
Q 029593 160 MDAMKLALHVANVDPRHAVR-QSSFLIFYFDF 190 (191)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~i~-iGDs~~~~~~~ 190 (191)
.+++...+..++..|.++++ +.++=+++.||
T Consensus 20 ~DI~~l~~~L~~~~P~~tifsid~~g~f~iDF 51 (147)
T PF04787_consen 20 KDIMVLKRHLLNKHPNDTIFSIDEDGKFFIDF 51 (147)
T ss_pred HHHHHHHHHHhcCCCcceeeeEcCCCCEEEEe
Confidence 37788888899999998888 77766677776
No 356
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=20.62 E-value=2e+02 Score=20.10 Aligned_cols=27 Identities=15% Similarity=0.148 Sum_probs=21.0
Q ss_pred CCCChhHHHHHHhhccCcE---EEecCChH
Q 029593 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN 115 (191)
Q Consensus 89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~ 115 (191)
..+.+.+.++++.+++.|+ +.||+...
T Consensus 73 Pll~~~l~~li~~~~~~g~~v~i~TNg~~~ 102 (191)
T TIGR02495 73 PTLQAGLPDFLRKVRELGFEVKLDTNGSNP 102 (191)
T ss_pred ccCcHhHHHHHHHHHHCCCeEEEEeCCCCH
Confidence 4556778899999988886 88888644
No 357
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=20.59 E-value=1.4e+02 Score=19.12 Aligned_cols=20 Identities=10% Similarity=0.051 Sum_probs=14.3
Q ss_pred HHHHHHHHHcCCCCCceEEe
Q 029593 161 DAMKLALHVANVDPRHAVRQ 180 (191)
Q Consensus 161 ~~~~~~~~~~~~~p~~~i~i 180 (191)
.+.+.+.+.+|++|+++.++
T Consensus 80 ~i~~~l~~~lgi~~~rv~I~ 99 (116)
T PTZ00397 80 AITKILASHLKVKSERVYIE 99 (116)
T ss_pred HHHHHHHHHhCcCcccEEEE
Confidence 44555556789999998763
No 358
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=20.45 E-value=3.6e+02 Score=19.87 Aligned_cols=71 Identities=13% Similarity=0.063 Sum_probs=46.2
Q ss_pred CCCChhHH-HHHHhhccCcE---EEecCChH-----HHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 029593 89 IKPDPQLR-NLLCSITQRKI---IFTNSDRN-----HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (191)
Q Consensus 89 ~~~~~~~~-~~l~~l~~~g~---i~t~~~~~-----~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~ 159 (191)
..+.|++. ++...++++|. |+...... .++..++.+|+.-.+...+|+-... ++
T Consensus 58 y~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL~~~---------------~~-- 120 (217)
T PF02593_consen 58 YGLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSLEEN---------------GN-- 120 (217)
T ss_pred eccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccccCCC---------------CC--
Confidence 46677777 55566666776 55554444 7888889999888888888765421 13
Q ss_pred HHHHHHHHHHcCCCCCce
Q 029593 160 MDAMKLALHVANVDPRHA 177 (191)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~ 177 (191)
..+...++.+|-+-=++
T Consensus 121 -p~i~~F~~~fGkP~~ei 137 (217)
T PF02593_consen 121 -PQIDEFAEYFGKPKVEI 137 (217)
T ss_pred -hhHHHHHHHhCCceEEE
Confidence 36667777787654333
No 359
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=20.11 E-value=1.4e+02 Score=18.41 Aligned_cols=34 Identities=9% Similarity=-0.087 Sum_probs=23.6
Q ss_pred HHHHHhhccCcE--EEecCChHHHHHHHhhcCCCccc
Q 029593 96 RNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCF 130 (191)
Q Consensus 96 ~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f 130 (191)
..+...++++|. .+++ ....++..++..|+...+
T Consensus 61 ~~~~~~~~~~g~~l~l~~-~~~~v~~~l~~~gl~~~~ 96 (106)
T TIGR02886 61 LGRYKKIKNEGGEVIVCN-VSPAVKRLFELSGLFKII 96 (106)
T ss_pred HHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhCCceEE
Confidence 345666777776 5554 555678888998887766
No 360
>PF12990 DUF3874: Domain of unknonw function from B. Theta Gene description (DUF3874); InterPro: IPR024450 This domain of unknown function if found in uncharacterised proteins from Bacteroides thetaiotaomicron and other Bacteroidetes.
Probab=20.05 E-value=1.7e+02 Score=17.36 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=26.8
Q ss_pred hHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCc
Q 029593 94 QLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIAD 128 (191)
Q Consensus 94 ~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~ 128 (191)
.+.++++.|+++.- .+++++....-.+|..+|+..
T Consensus 27 sa~~If~~L~k~~~~~l~~~~~~~FGriL~~~gi~~ 62 (73)
T PF12990_consen 27 SAAEIFERLQKKSPAALRGSNPNHFGRILQKLGIPR 62 (73)
T ss_pred cHHHHHHHHHHhCccccccCCHHHHHHHHHHcCCCc
Confidence 34578888887644 888888888888888888854
No 361
>PRK06856 DNA polymerase III subunit psi; Validated
Probab=20.03 E-value=1.6e+02 Score=19.63 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCCCCceEEec
Q 029593 162 AMKLALHVANVDPRHAVRQS 181 (191)
Q Consensus 162 ~~~~~~~~~~~~p~~~i~iG 181 (191)
.+..+++.+++++++|.++-
T Consensus 52 L~~dVLrsl~L~~~q~~~lt 71 (128)
T PRK06856 52 LLQDVLRSLTLSPDQVLCLT 71 (128)
T ss_pred HHHHHHHHcCCCHHHeeeeC
Confidence 99999999999999988753
No 362
>COG4957 Predicted transcriptional regulator [Transcription]
Probab=20.02 E-value=75 Score=21.36 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=20.8
Q ss_pred ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 029593 129 CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRH 176 (191)
Q Consensus 129 ~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~ 176 (191)
.-|.|+|.++. |.--..-+.+..++|++|++
T Consensus 73 tpD~IicLEDG-----------------kkfKSLKRHL~t~~gmTPd~ 103 (148)
T COG4957 73 TPDYIICLEDG-----------------KKFKSLKRHLTTHYGLTPDE 103 (148)
T ss_pred CCCeEEEeccC-----------------cchHHHHHHHhcccCCCHHH
Confidence 34789998885 44345666666677877754
Done!