BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029595
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2
Length = 254
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTL 86
PS V L +Q R
Sbjct: 101 PSSVVLTSIQVMSRVF 116
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K +LF YN +Q G WI + +L S TF + ++++ Q A +EV++ A
Sbjct: 144 KGFLFMYNLVQFLGYSWIFVNMTVRLFILGQDSFYDTFHTIADVMYFCQMLAIMEVINPA 203
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
VG++ +GV F+Q GR LF + + E +Q
Sbjct: 204 VGLVKTGVMPAFIQVMGRNFILFVIFGSLEDMQ 236
>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1
Length = 255
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 42 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101
Query: 71 PSGVWLPFMQWCGRTL 86
PS V L Q R
Sbjct: 102 PSSVVLTSFQVMSRVF 117
>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1
Length = 254
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTL 86
PS V L Q R
Sbjct: 101 PSSVVLTSFQVMSRVF 116
>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1
Length = 254
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTL 86
PS V L Q R
Sbjct: 101 PSSVVLTSFQVMSRVF 116
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQLLGFSWIFVNLTVRFFILGKESFYDTFHNVADMMYFCQMLALVETLNAA 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ + V +Q+ GR LF + E +Q
Sbjct: 207 IGVTSTPVLPALIQFLGRNFILFLVFGTMEEMQ 239
>sp|A2AKM2|HACD4_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Mus musculus GN=Ptplad2 PE=2 SV=2
Length = 232
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 RQPIKLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEV 62
R +YLF Y +Q G WI+A + S+A TF + G ++ + Q+ + LE+
Sbjct: 13 RYRKNVYLFIYYLIQFCGHSWILANMTVRFFSFGKDSMADTFYAIGLVMRVCQSISLLEL 72
Query: 63 VHGAVGILPSGVWLPFMQWCGRT--LFFLVTACEIVQVS-VLCSKH-HWSLSTLANLPQV 118
+H +GI + ++ F+Q R LF ++T+ E VQ V+C W+L L V
Sbjct: 73 LHIYIGIESNQLFPRFLQLTERVIILFGVITSQEEVQEKCVVCVLFILWNL-----LDMV 127
Query: 119 HYVHSTIS 126
Y +S +S
Sbjct: 128 RYTYSMLS 135
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 149 KGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAA 208
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ S V +Q GR LF + E +Q
Sbjct: 209 IGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 241
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAA 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ S V +Q GR LF + E +Q
Sbjct: 207 IGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 239
>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1
Length = 281
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LEVVH +GI+P+ V
Sbjct: 72 YNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVVHCLIGIVPTSV 131
Query: 75 WLPFMQWCGR 84
+ +Q R
Sbjct: 132 LVTGVQVSSR 141
>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1
Length = 288
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 79 YNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 138
Query: 75 WLPFMQWCGR 84
+ +Q R
Sbjct: 139 LVAGVQVSSR 148
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQFLGFSWIFVNMTVRFFILGKESFYDTFHTVADMMYFCQMLAAVESINAA 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ S V Q GR LF + E +Q
Sbjct: 207 IGVTKSPVVPSLFQLLGRNFILFIIFGTMEEMQ 239
>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1
Length = 249
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 40 YNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 99
Query: 75 WLPFMQWCGR 84
+ +Q R
Sbjct: 100 IVAGVQVSSR 109
>sp|O17040|HACD_CAEEL Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase hpo-8 OS=Caenorhabditis elegans GN=hpo-8
PE=3 SV=2
Length = 218
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 8 IKLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAV 67
++ YL YN LQ GW + + L + + + S + I QTAA LEV+H V
Sbjct: 3 VQTYLVAYNVLQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIV 62
Query: 68 GILPSGVWLPFMQWCGRTLF 87
G++ S V MQ R +
Sbjct: 63 GLVRSPVGTTAMQVTSRVVL 82
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YL YN +Q G WI + +L S TF + ++++ QT A +E+++
Sbjct: 147 KGYLIMYNLVQFLGFSWIFVNMTVRLFILGKDSFYDTFHTIADMMYFCQTLALMEILNSL 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQVS--VLCSKHHWSLSTLANLP 116
+G++ S + +Q GR LF ++ + E +Q V + WS+ L P
Sbjct: 207 IGLVRSPLIPAVIQVFGRNFILFVVLGSLEEMQSKAVVFFLFYFWSIIELFRYP 260
>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2B OS=Oryza sativa subsp.
japonica GN=PAS2B PE=2 SV=1
Length = 221
Score = 37.4 bits (85), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
+LYL YN GW ++ ++ LL + A +A+ + QTAAFLE++HG VG
Sbjct: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEA-VYAAVERPLQFAQTAAFLEILHGLVG 68
Query: 69 ILPSGV 74
++ S V
Sbjct: 69 LVRSPV 74
>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2A OS=Oryza sativa subsp.
japonica GN=PAS2A PE=2 SV=2
Length = 221
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
+LYL YN GW ++ ++ LL + A +A+ + QTAAFLE++HG VG
Sbjct: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEA-VYAAVERPLQFAQTAAFLEILHGLVG 68
Query: 69 ILPSGV 74
++ S V
Sbjct: 69 LVRSPV 74
>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1
Length = 288
Score = 37.4 bits (85), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
Y+ AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 79 YDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 138
Query: 75 WLPFMQWCGR 84
+ +Q R
Sbjct: 139 IVTGVQVSSR 148
>sp|Q5VWC8|HACD4_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Homo sapiens GN=PTPLAD2 PE=1 SV=1
Length = 232
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 11 YLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
YLF Y +Q G WI + S+ TF + G ++ + Q+ + LE++H VG
Sbjct: 19 YLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVG 78
Query: 69 ILPSGVWLPFMQWCGR--TLFFLVTACEIVQVS-VLCSKH-HWSLSTLANLPQVHYVHST 124
I + + F+Q R LF ++T+ E VQ V+C W+L L V Y +S
Sbjct: 79 IESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNL-----LDMVRYTYSM 133
Query: 125 IS 126
+S
Sbjct: 134 LS 135
>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2 OS=Arabidopsis thaliana
GN=PAS2 PE=1 SV=1
Length = 221
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
++YL YN + AGW +++ ++ L T + + + + + QTAA LE++HG VG
Sbjct: 10 RVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEILHGLVG 68
Query: 69 ILPSGV 74
++ S V
Sbjct: 69 LVRSPV 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.138 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,163,047
Number of Sequences: 539616
Number of extensions: 2502749
Number of successful extensions: 6651
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6629
Number of HSP's gapped (non-prelim): 23
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)