Query 029595
Match_columns 191
No_of_seqs 129 out of 387
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 15:26:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029595.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029595hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02838 3-hydroxyacyl-CoA deh 100.0 2.3E-42 5E-47 295.4 5.3 130 4-136 5-142 (221)
2 KOG3187 Protein tyrosine phosp 100.0 1.4E-35 2.9E-40 253.8 5.4 129 6-136 7-142 (223)
3 COG5198 Ptpl Protein tyrosine 100.0 2.9E-29 6.4E-34 208.8 5.9 128 7-137 5-138 (209)
4 PF04387 PTPLA: Protein tyrosi 100.0 4.1E-30 8.8E-35 210.7 0.2 80 55-136 1-87 (164)
5 PTZ00251 fatty acid elongase; 71.2 6.8 0.00015 34.8 4.5 125 1-128 50-191 (272)
6 PF01151 ELO: GNS1/SUR4 family 70.0 7.7 0.00017 33.5 4.5 125 1-128 27-171 (250)
7 PF14333 DUF4389: Domain of un 66.1 40 0.00086 24.6 6.9 50 10-59 14-64 (80)
8 PF06364 DUF1068: Protein of u 30.7 23 0.0005 30.1 0.8 19 163-184 43-61 (176)
9 TIGR00597 rad10 DNA repair pro 29.0 24 0.00051 27.9 0.6 16 101-116 96-111 (112)
10 KOG3292 Predicted membrane pro 23.7 1.7E+02 0.0038 25.0 4.9 32 43-75 137-168 (196)
11 PF12156 ATPase-cat_bd: Putati 23.2 22 0.00047 26.4 -0.5 22 161-182 26-47 (88)
12 PF14982 UPF0731: UPF0731 fami 20.9 47 0.001 24.6 0.8 15 155-169 37-51 (79)
No 1
>PLN02838 3-hydroxyacyl-CoA dehydratase subunit of elongase
Probab=100.00 E-value=2.3e-42 Score=295.40 Aligned_cols=130 Identities=21% Similarity=0.336 Sum_probs=120.3
Q ss_pred CCCcchhhhhHHhHHHHHHHHHHHHHHHHHHHcCCCcchhhHhHHHHHHHHHHHHHHHHHhhhcccccCcccchhhhhhh
Q 029595 4 QRQPIKLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCG 83 (191)
Q Consensus 4 ~~~l~~~YL~lYN~vq~~GWs~IL~~ll~~~l~~g~~~~~y~~v~~~l~i~QtlAvLEIvHaa~GLVrS~v~tT~mQV~s 83 (191)
.++++|.||++||++|++||++||++++.++...|+ +++|+++++.++++|++|++||+|+++|+||||+.+|+|||+|
T Consensus 5 ~~~l~~~YL~~YN~~~~~gW~~il~~~~~~~~~~~~-~~~~~~v~~~l~~~QtlAilEilHa~~GlVrS~v~~T~~QV~s 83 (221)
T PLN02838 5 GSLLRRLYLTVYNWVVFIGWAQVLYLAVTTLKESGH-EAVYAAVERPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGS 83 (221)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-chHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcchHHHHHHH
Confidence 346889999999999999999999999999988774 4679999999999999999999999999999999999999999
Q ss_pred heeeeeeeecccccccc----eeeeeehhhhhhcccchhHHHHHh-CCCCc---ceeeecC
Q 029595 84 RTLFFLVTACEIVQVSV----LCSKHHWSLSTLANLPQVHYVHST-ISYRS---TWGNVTP 136 (191)
Q Consensus 84 Rl~Ivw~I~~~~Pe~~~----~~lllAWSitEIIRY~y~~Y~~~L-lg~~~---tWLRYt~ 136 (191)
|++++|+|+...||+++ +.|++|||++|+||||| |++++ .|..| +|||||.
T Consensus 84 R~~iv~~v~~~~p~~~~~~~~~~l~~aWs~tEvIRY~y--Y~~~~~~~~~p~~L~WLRYt~ 142 (221)
T PLN02838 84 RLFLTWGILWSFPEVRSHILVTSLVISWSITEIIRYSF--FGMKEAFGFAPSWLLWLRYST 142 (221)
T ss_pred HHHHHHHHhhcCcchhcccHHHHHHHHHHHHHHHHHHH--HHHHHhcCCCcHHHHHHHHhc
Confidence 99999999999999876 77999999999999999 99985 47654 9999997
No 2
>KOG3187 consensus Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg) [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=253.80 Aligned_cols=129 Identities=23% Similarity=0.338 Sum_probs=122.7
Q ss_pred CcchhhhhHHhHHHHHHHHHHHHHHHHHHHcCCCcchhhHhHHHHHHHHHHHHHHHHHhhhcccccCcccchhhhhhhhe
Q 029595 6 QPIKLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRT 85 (191)
Q Consensus 6 ~l~~~YL~lYN~vq~~GWs~IL~~ll~~~l~~g~~~~~y~~v~~~l~i~QtlAvLEIvHaa~GLVrS~v~tT~mQV~sRl 85 (191)
.+++.||++||++|++||++++..+......+|+.+++|+++.+.++++|++|++|++|+.+|+|+||+++|++||.||+
T Consensus 7 ~~~~~yL~~YNl~~fvgw~~~~l~~~~~~~~~~~~~~~y~si~~~l~~~Qtla~lEi~~~~~g~v~S~~v~t~~Qv~sRl 86 (223)
T KOG3187|consen 7 MLKKSYLFLYNLVSFVGWIVLLLATVVLYLTKGSPAVLYDSIEKVLKFCQTLALLEIINASFGLVKSSPVVTLFQVSSRL 86 (223)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHhhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeeeeeecccc
Confidence 46899999999999999999999999999889988889999999999999999999999999999999999999999999
Q ss_pred eeeeeeecccccccc----eeeeeehhhhhhcccchhHHHHHhCCCCc---ceeeecC
Q 029595 86 LFFLVTACEIVQVSV----LCSKHHWSLSTLANLPQVHYVHSTISYRS---TWGNVTP 136 (191)
Q Consensus 86 ~Ivw~I~~~~Pe~~~----~~lllAWSitEIIRY~y~~Y~~~Llg~~~---tWLRYt~ 136 (191)
+++|++++..|+.++ ..++.+|+++|||||+| |+++++|..| +|||||.
T Consensus 87 ~il~~i~~~~~~~~~~~~~~~l~~~ws~tEIiRY~f--Y~f~~~~~~p~~l~wlRYt~ 142 (223)
T KOG3187|consen 87 FILWGIFHMCSIIQASAVVFFLLIAWSLTEIIRYSF--YAFNLLGVLPKLLTWLRYTL 142 (223)
T ss_pred eehhhhhhccchhhccchHHHHHHHHHHHHHHHHHH--HHHHhccCCchhhhHhhhhh
Confidence 999999999999884 88899999999999999 9999998864 9999996
No 3
>COG5198 Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]
Probab=99.95 E-value=2.9e-29 Score=208.82 Aligned_cols=128 Identities=16% Similarity=0.142 Sum_probs=113.6
Q ss_pred cchhhhhHHhHHHHHHHHHHHHHHHHHHHcCCCcchhhHhHHHHHHHHHHHHHHHHHhhhcccccCcccchhhhhhhhee
Q 029595 7 PIKLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTL 86 (191)
Q Consensus 7 l~~~YL~lYN~vq~~GWs~IL~~ll~~~l~~g~~~~~y~~v~~~l~i~QtlAvLEIvHaa~GLVrS~v~tT~mQV~sRl~ 86 (191)
++-.||-+||.+++.+|.+++.....-+-..++++ .|++......++|++|++|++|+.+|.|+|+++||.|||.||++
T Consensus 5 l~isyl~lYN~~s~f~w~~vlll~~lv~~kt~dpa-~f~et~~va~lvQt~ai~E~~ns~~g~v~S~~LtTv~Qv~SRl~ 83 (209)
T COG5198 5 LPISYLRLYNTASCFIWCIVLLLASLVFYKTMDPA-VFHETLRVAGLVQTFAIMEAANSSAGKVNSRYLTTVMQVISRLF 83 (209)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhccChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHH
Confidence 44589999999999999999998888777778877 68899999999999999999999999999999999999999999
Q ss_pred eeeeeeccccc-ccc---eeeeeehhhhhhcccchhHHHHHhCCCC--cceeeecCC
Q 029595 87 FFLVTACEIVQ-VSV---LCSKHHWSLSTLANLPQVHYVHSTISYR--STWGNVTPK 137 (191)
Q Consensus 87 Ivw~I~~~~Pe-~~~---~~lllAWSitEIIRY~y~~Y~~~Llg~~--~tWLRYt~~ 137 (191)
++|||+++... +++ ..+.+|||+||++||.| |++++-|.+ .+||||+.-
T Consensus 84 ivwgvf~p~~~~i~s~~y~s~~~aWsiteivRYaf--Y~F~lng~p~~l~~lRYNlF 138 (209)
T COG5198 84 IVWGVFYPYCGIINSWTYPSITTAWSITEIVRYAF--YTFRLNGIPNTLRVLRYNLF 138 (209)
T ss_pred HHHhhhhccccccccchHHHHHHHHHHHHHHHHHH--HHHHhcCCchhhhhhhhhhh
Confidence 99999955443 344 89999999999999999 999986643 599999963
No 4
>PF04387 PTPLA: Protein tyrosine phosphatase-like protein, PTPLA; InterPro: IPR007482 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types [].
Probab=99.95 E-value=4.1e-30 Score=210.74 Aligned_cols=80 Identities=28% Similarity=0.390 Sum_probs=76.8
Q ss_pred HHHHHHHHHhhhcccccCcccchhhhhhhheeeeeeeecccccccc----eeeeeehhhhhhcccchhHHHHHhCCCCc-
Q 029595 55 QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVSV----LCSKHHWSLSTLANLPQVHYVHSTISYRS- 129 (191)
Q Consensus 55 QtlAvLEIvHaa~GLVrS~v~tT~mQV~sRl~Ivw~I~~~~Pe~~~----~~lllAWSitEIIRY~y~~Y~~~Llg~~~- 129 (191)
|++|++||+|+++|+||||+.+|++||+||++++|+++...||.++ .+|++|||++|+||||| |+++++|..|
T Consensus 1 Q~~a~lEi~h~~~Glv~S~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~y--Y~~~l~~~~p~ 78 (164)
T PF04387_consen 1 QTLAVLEILHAALGLVRSPVLTTFMQVFSRLFVVWGVIYPFPEVQSSPAVPLLLIAWSLTEVIRYPY--YALKLLGIVPY 78 (164)
T ss_pred CchHHHHHHHHHhccccCccHHHHHHHHHHHHeehhhhccccccccccchhhHHHHHHhhhcchhHH--HHHHhcCCCch
Confidence 8999999999999999999999999999999999999999999865 99999999999999999 9999999875
Q ss_pred --ceeeecC
Q 029595 130 --TWGNVTP 136 (191)
Q Consensus 130 --tWLRYt~ 136 (191)
+|||||+
T Consensus 79 ~L~WLRYs~ 87 (164)
T PF04387_consen 79 WLTWLRYSA 87 (164)
T ss_pred HHHHHHHhh
Confidence 9999996
No 5
>PTZ00251 fatty acid elongase; Provisional
Probab=71.16 E-value=6.8 Score=34.85 Aligned_cols=125 Identities=13% Similarity=0.073 Sum_probs=78.3
Q ss_pred CCCCCCcc--hhhhhHHhHHHHHHHHHHHHHHHH----HHHcCC--------Ccchhh-HhHHHHHHHHHHHHHHHHHhh
Q 029595 1 MAHQRQPI--KLYLFGYNSLQAAGWIVAIFMLLS----NLLSTK--------SIAGTF-ASAGEIIWILQTAAFLEVVHG 65 (191)
Q Consensus 1 ~~~~~~l~--~~YL~lYN~vq~~GWs~IL~~ll~----~~l~~g--------~~~~~y-~~v~~~l~i~QtlAvLEIvHa 65 (191)
|++++|.. |.-+.+||++|.+.=++..+..+. .....| +....+ ...+....++=..-+.|.+=.
T Consensus 50 ~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~~~~~~~~~~~~~f~lsK~~El~DT 129 (272)
T PTZ00251 50 FHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVVPPLLNNLRKYGLHDTLCTFREDEFYTGKVGVAMGLFSISKVPEFGDT 129 (272)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCCCcchhHHHHHHHHHHHHHHHHHHHhH
Confidence 35678887 889999999998876666665542 222222 111112 344555666666678888888
Q ss_pred hcccccCcccchhhhhhhheeeeeeeecccccccc-eee-eeehhhhhhcccchhHHHHHhCCCC
Q 029595 66 AVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVSV-LCS-KHHWSLSTLANLPQVHYVHSTISYR 128 (191)
Q Consensus 66 a~GLVrS~v~tT~mQV~sRl~Ivw~I~~~~Pe~~~-~~l-llAWSitEIIRY~y~~Y~~~Llg~~ 128 (191)
.+=+.|-+ -.+++.|.==..+++.......+-.+ ... ...=|..-++=|+| |+++.+|.+
T Consensus 130 vF~VLRKK-qvsFLHvYHH~~~~~~~w~~~~~g~~~~~~~~~lNs~VH~iMY~Y--Y~lsa~g~~ 191 (272)
T PTZ00251 130 FFLIMGGK-KLPFLSWFHHVTIFLYAWMSYQQGSSIWICAAAMNYFVHSIMYFY--FALSEAGFK 191 (272)
T ss_pred hhhhhcCC-CchHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH--HHHHhcCCc
Confidence 88777777 77888887555444333222221111 211 33345688999999 999988865
No 6
>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established. The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane
Probab=69.98 E-value=7.7 Score=33.50 Aligned_cols=125 Identities=14% Similarity=0.137 Sum_probs=78.4
Q ss_pred CCCCCCc-chhhhhHHhHHHHHHHHHHHHHHHHHHHc----CC-----------Ccchhh-HhHHHHHHHHHHHHHHHHH
Q 029595 1 MAHQRQP-IKLYLFGYNSLQAAGWIVAIFMLLSNLLS----TK-----------SIAGTF-ASAGEIIWILQTAAFLEVV 63 (191)
Q Consensus 1 ~~~~~~l-~~~YL~lYN~vq~~GWs~IL~~ll~~~l~----~g-----------~~~~~y-~~v~~~l~i~QtlAvLEIv 63 (191)
|+++++. -|.-+.+||+++.+.=++.++..+..... .| +.+... +.++....++=..-+.|.+
T Consensus 27 m~~Rkp~~Lk~~~~~~N~~l~~~S~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~~~~~~~~~~~~~~~~fylSK~~Ell 106 (250)
T PF01151_consen 27 MKNRKPFNLKTLIIVYNLFLVVFSAYMFYGILPALFSSLFKGGLYSSFCQPVDFDPDSYSSGRVGFWYWLFYLSKYYELL 106 (250)
T ss_pred HhhCCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 4445444 46789999999887766666666532111 11 111111 2344455555666788988
Q ss_pred hhhcccccCcccchhhhhhhheeee---eeeecccccccceeeeeehhhhhhcccchhHHHHHhCCCC
Q 029595 64 HGAVGILPSGVWLPFMQWCGRTLFF---LVTACEIVQVSVLCSKHHWSLSTLANLPQVHYVHSTISYR 128 (191)
Q Consensus 64 Haa~GLVrS~v~tT~mQV~sRl~Iv---w~I~~~~Pe~~~~~lllAWSitEIIRY~y~~Y~~~Llg~~ 128 (191)
=..+=+.|-+ -.++++|.==..++ |......|..+.....+.=+..-++-|+| |+++.+|.+
T Consensus 107 DTvflvLrkK-~lsfLHvYHH~~~~~~~w~~~~~~~~~~~~~~~~~N~~VH~iMY~Y--Y~l~a~g~~ 171 (250)
T PF01151_consen 107 DTVFLVLRKK-QLSFLHVYHHASTLLYCWISYKYGPGGQIWFIAALNSFVHVIMYSY--YFLSALGIR 171 (250)
T ss_pred HHHHHHHhCC-CcchhHHhhhhhhhhhhhheeeeccccchhHHHHHHHHHHHHHHHH--HHHHhcccc
Confidence 8888888888 88999998555444 44443443333233334456789999999 999999864
No 7
>PF14333 DUF4389: Domain of unknown function (DUF4389)
Probab=66.09 E-value=40 Score=24.57 Aligned_cols=50 Identities=6% Similarity=0.072 Sum_probs=39.6
Q ss_pred hhhhHHhHHHHHHHHHHHHHHHHHHHcCCCcchhhHhHHHHHHHH-HHHHH
Q 029595 10 LYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWIL-QTAAF 59 (191)
Q Consensus 10 ~YL~lYN~vq~~GWs~IL~~ll~~~l~~g~~~~~y~~v~~~l~i~-QtlAv 59 (191)
.+.++++.++.+.|..++++.+..++.+...+..++-.....++. |..+.
T Consensus 14 ~~~ivl~~~~~~~~~~~~~q~~~~L~tg~~p~~L~~f~~~l~~y~~rv~~y 64 (80)
T PF14333_consen 14 PFAIVLSLASIVLGVLVLIQWFAILFTGRYPEPLFDFGAGLSRYIYRVLAY 64 (80)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999988887777777666665554 55544
No 8
>PF06364 DUF1068: Protein of unknown function (DUF1068); InterPro: IPR010471 This family consists of several hypothetical plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.
Probab=30.67 E-value=23 Score=30.09 Aligned_cols=19 Identities=47% Similarity=0.980 Sum_probs=15.4
Q ss_pred cCCCceeeccceehhhhhHHHH
Q 029595 163 CCPGCICDVSICLDQTLLTYAQ 184 (191)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~ 184 (191)
-||-|.||-| .+.+++.++
T Consensus 43 sCppC~CDCs---~~~ll~ip~ 61 (176)
T PF06364_consen 43 SCPPCDCDCS---SQPLLSIPP 61 (176)
T ss_pred CCCCCCCCCC---CHHHHHhcc
Confidence 5999999965 688888774
No 9
>TIGR00597 rad10 DNA repair protein rad10. All proteins in this family for which functions are known are components in a multiprotein endonuclease complex (usually made up of Rad1 and Rad10 homologs). This complex is used primarily for nucleotide excision repair but also for some aspects of recombination repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=28.96 E-value=24 Score=27.91 Aligned_cols=16 Identities=19% Similarity=0.185 Sum_probs=14.9
Q ss_pred eeeeeehhhhhhcccc
Q 029595 101 LCSKHHWSLSTLANLP 116 (191)
Q Consensus 101 ~~lllAWSitEIIRY~ 116 (191)
.++++|||.-|.-||-
T Consensus 96 ~TLilaws~eEaa~Yl 111 (112)
T TIGR00597 96 CTLILAWSFEEAARYL 111 (112)
T ss_pred cEEEEECCHHHHHHhh
Confidence 9999999999999983
No 10
>KOG3292 consensus Predicted membrane protein [Function unknown]
Probab=23.71 E-value=1.7e+02 Score=25.05 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=24.0
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhhcccccCccc
Q 029595 43 TFASAGEIIWILQTAAFLEVVHGAVGILPSGVW 75 (191)
Q Consensus 43 ~y~~v~~~l~i~QtlAvLEIvHaa~GLVrS~v~ 75 (191)
+-|+..+.+-+.-.++.+|+. +.+|..++|..
T Consensus 137 LlDNLlQsl~maP~Fv~lE~l-~~~Gy~P~~~~ 168 (196)
T KOG3292|consen 137 LLDNLLQSLLMAPFFVLLEVL-SVFGYEPYPGF 168 (196)
T ss_pred HHHHHHHHHHHhHHHHHHHHH-HHccCCcCcch
Confidence 345555555566668899999 99999998764
No 11
>PF12156 ATPase-cat_bd: Putative metal-binding domain of cation transport ATPase; InterPro: IPR021993 This domain is found in bacteria, and is approximately 90 amino acids in length. It is found associated with PF00403 from PFAM, PF00122 from PFAM, PF00702 from PFAM. The cysteine-rich nature and composition suggest this might be a cation-binding domain; most members are annotated as being cation transport ATPases.
Probab=23.23 E-value=22 Score=26.35 Aligned_cols=22 Identities=32% Similarity=0.776 Sum_probs=12.6
Q ss_pred cccCCCceeeccceehhhhhHH
Q 029595 161 LQCCPGCICDVSICLDQTLLTY 182 (191)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~ 182 (191)
.-||+||.=--.+=.|.-|-.|
T Consensus 26 ~FCC~GC~~V~~~i~~~gL~~y 47 (88)
T PF12156_consen 26 PFCCPGCQAVYQLIHENGLESY 47 (88)
T ss_pred ccccHHHHHHHHHHHHcchHHH
Confidence 4599999644444444444444
No 12
>PF14982 UPF0731: UPF0731 family
Probab=20.90 E-value=47 Score=24.62 Aligned_cols=15 Identities=40% Similarity=0.961 Sum_probs=12.7
Q ss_pred CCcccccccCCCcee
Q 029595 155 WPPFQLLQCCPGCIC 169 (191)
Q Consensus 155 ~~~~~~~~~~~~~~~ 169 (191)
-+|-.-|+-||||.|
T Consensus 37 ~~p~RqLrRCpgsHC 51 (79)
T PF14982_consen 37 HSPTRQLRRCPGSHC 51 (79)
T ss_pred cCccchhccCCCcce
Confidence 467778899999998
Done!