BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029598
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 98/164 (59%), Gaps = 8/164 (4%)
Query: 4 GKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKW 63
GKGW LL+VACL++AAK+EET VP L+DLQ+ +P +F+F+ K+V RMELLV++ LKW
Sbjct: 118 GKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP--QFVFEAKSVQRMELLVLNKLKW 175
Query: 64 RLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAV 123
RL +TP ++ YF+ K+S ++ ++ S + +I ST IDFL PS +AAAV
Sbjct: 176 RLRAITPCSYIRYFLRKMS--KCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAV 233
Query: 124 VLWATDH----SVDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQL 163
L + D + L K+ V++ +I + S L
Sbjct: 234 ALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGSDL 277
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 8/177 (4%)
Query: 4 GKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKW 63
GK W LL+VACL++AAK+EET+VP L+ LQ+ P F+F+ K+V RMELLV++ L+W
Sbjct: 109 GKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPM--FVFEAKSVQRMELLVLNVLRW 166
Query: 64 RLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAV 123
RL VTP +V YF+SKI+ ++ ++ + + + +I ST IDFL S IAAAV
Sbjct: 167 RLRAVTPCSYVRYFLSKINGYD--QEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAV 224
Query: 124 VLWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLHINSVQKPEHVAVNDK 180
L + D+ + L K+ V++ +I ++ S +S Q P + + K
Sbjct: 225 ALSVSGEHFDKFSFSSSFSSLEKERVKKIGEMIERDGSS----SSSQTPNNTVLQFK 277
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 18/185 (9%)
Query: 6 GWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRL 65
GW LL+VACL++AAKMEE VP+L D Q+ ++LF+ KT+ RMELLV+S L WRL
Sbjct: 124 GWPMQLLAVACLSLAAKMEEILVPSLFDFQV--AGVKYLFEAKTIKRMELLVLSVLDWRL 181
Query: 66 CTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVL 125
+VTPFDF+ +F KI +P G SHA +I+S FL PS+IAAA +L
Sbjct: 182 RSVTPFDFISFFAYKI---DPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAIL 238
Query: 126 WATDHSVDEQNLGCFHKR-------LNKDMVRRCYNLIRKNRSQLLHINSVQKPEHVAVN 178
+ ++ H+ L+K+ + RCY L+ ++ + N + P+ +A
Sbjct: 239 CVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLM---KAMAIENNRLNTPKVIA-- 293
Query: 179 DKLKV 183
KL+V
Sbjct: 294 -KLRV 297
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 15/175 (8%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
PG GW LL+V CL++AAKMEET VP++LDLQ+ +R++F+ +T+ RMELLV+ +L
Sbjct: 154 PGNGWAMQLLAVTCLSLAAKMEETLVPSILDLQM--EDARYIFEHRTIFRMELLVLDALD 211
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
WRL ++TPF F++ F K+ +P + A + ++T +FL PS+IAAA
Sbjct: 212 WRLRSITPFTFMYLFADKV---DPNGKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAA 268
Query: 123 VVLWATDH-----SVDEQNLGCFH-KRLNKDMVRRCYNLIRKNRSQLLHINSVQK 171
VL A+ S+D L + L+++ + RCY L++ QL+ N+V +
Sbjct: 269 AVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQ----QLISSNNVGR 319
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 12/177 (6%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
+ G+ W LLSVACL++AAKMEET VP LDLQ+ EP RFLF+ +T+HRMELLV+++
Sbjct: 147 LPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEP--RFLFEVETIHRMELLVLTN 204
Query: 61 LKWRLCTVTPFDFVHYFISKISCFN--PQRDGFGSVFSHAAALIISTRTVIDFLACPPST 118
L WR+ VTPF ++ YF+ K++ N P+ S ++ LI+ FL PS
Sbjct: 205 LNWRMQAVTPFSYIDYFLRKLNSGNAAPR-----SWLLRSSELILRIAAGTGFLEFRPSE 259
Query: 119 IAAAVVLWATDHS--VDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLHINSVQ-KP 172
IAAAV + V E+++ ++K V +C I+ + + IN+VQ KP
Sbjct: 260 IAAAVAATVAGEATGVVEEDIAEAFTHVDKGRVLQCQEAIQDHHYSMATINTVQPKP 316
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 27/176 (15%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
+ G+GW LL+VACL++AAKMEET VP+LLDLQ+ SR++F+P+T+ RME L++++
Sbjct: 119 LPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQV--ECSRYVFEPRTICRMEFLILTA 176
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIA 120
L WRL +VTPF F+ +F K + A++ + + I FL PS++A
Sbjct: 177 LNWRLRSVTPFTFIDFFACK---------------HISNAMVQNANSDIQFLDHCPSSMA 221
Query: 121 AAVVLWATDHS-----VDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLHINSVQK 171
AA VL AT + V+ + + L ++ + CY L+ Q L I +VQ+
Sbjct: 222 AAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLM-----QQLVIGNVQR 272
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Query: 10 HLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVT 69
LL+VA L++AAKMEET VP+ LDLQ+ + ++++F+ +T+ RMEL V+++LKWR+ VT
Sbjct: 136 QLLAVASLSLAAKMEETVVPHPLDLQVCD--AKYVFETRTIKRMELAVLNALKWRMQAVT 193
Query: 70 PFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATD 129
F+ Y++ K FN S S + LI+ST V +FL PS IAA+V L A +
Sbjct: 194 ACSFIDYYLHK---FNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALE 250
Query: 130 H---SVDEQNLGCFHKRLNKDMVRRCYNLIR 157
S+ E+ C+ K L K+ V RCY +I+
Sbjct: 251 EHETSMFERVATCY-KNLKKERVLRCYEMIQ 280
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 96/157 (61%), Gaps = 11/157 (7%)
Query: 5 KGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWR 64
K W LL+V+CL++A+KMEET VP+++DLQ+ +P +F+F+ KT+ RMELLV+++L WR
Sbjct: 138 KDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDP--KFVFEAKTIKRMELLVVTTLNWR 195
Query: 65 LCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPS----TIA 120
L +TPF F+ YF+ KIS + ++ ++ I++T I+FL PS A
Sbjct: 196 LQALTPFSFIDYFVDKISGHVSE-----NLIYRSSRFILNTTKAIEFLDFRPSEIAAAAA 250
Query: 121 AAVVLWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIR 157
+V + +DE+ + ++ V+RC NL+R
Sbjct: 251 VSVSISGETECIDEEKALSSLIYVKQERVKRCLNLMR 287
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 7 WQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLC 66
W LL VACL++AAKMEET+ P LDLQ+ P ++F +T+HRME++V+++LKWR+
Sbjct: 149 WMQQLLIVACLSLAAKMEETAAPGTLDLQVCNP--EYVFDAETIHRMEIIVLTTLKWRMQ 206
Query: 67 TVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLW 126
VTPF ++ +F+ KI N + S +I+ST FL PS IA AV L
Sbjct: 207 AVTPFTYIGHFLDKI---NEGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALS 263
Query: 127 ATDHSVDEQNLGCFHKR----LNKDMVRRCYNLIRKNRSQLLHINSVQKP 172
+ G + ++KD V RC+ +++ L+ NS P
Sbjct: 264 VVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQE--MALVMQNSTASP 311
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 9/131 (6%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P GW LL VACL++AAKMEE+S P LLDLQ+ +RF+F+P+T+ RMEL+V+ L
Sbjct: 163 PDHGWASQLLCVACLSLAAKMEESSAPPLLDLQI--EGTRFIFEPRTIQRMELIVLVELD 220
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGS--VFSHAAALIISTRTVIDFLACPPSTIA 120
WRL +VTPF FV +F K+ G S + A +I+S ++FL S++A
Sbjct: 221 WRLRSVTPFAFVDFFACKVG-----SSGRSSRILALRACQIILSAIHELEFLNHCASSMA 275
Query: 121 AAVVLWATDHS 131
AA VL+A + S
Sbjct: 276 AAAVLFAVNES 286
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 13/162 (8%)
Query: 4 GKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKW 63
GK W LL+VACL++AAKMEET VP LDLQ+ E R++F+ KT+ RMELLV+S+LKW
Sbjct: 143 GKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGE--ERYVFEAKTIQRMELLVLSTLKW 200
Query: 64 RLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAV 123
R+ VTPF +V YF+ +++ +P G ++ S L I+ T + L PS IAAAV
Sbjct: 201 RMQAVTPFSYVDYFLRELNGGDPP-SGRSALLSSELILCIARGT--ECLGFRPSEIAAAV 257
Query: 124 VLWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLH 165
V E++ H +NK+ + C +I+ +L+H
Sbjct: 258 AA----AVVGEEHAAFSH--VNKERMSHCQEVIQAM--ELIH 291
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 8/155 (5%)
Query: 5 KGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWR 64
+ W LLSV+CL++A KMEET VP +DLQ+ + + ++F+ + + RMEL+VM +LKWR
Sbjct: 136 ESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFD--AEYVFEARHIKRMELIVMKTLKWR 193
Query: 65 LCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVV 124
L VTPF F+ YF+ K FN + ++ S + L + T FL+ PS IAAAVV
Sbjct: 194 LQAVTPFSFIGYFLDK---FNEGKPPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVV 250
Query: 125 LWATDHS---VDEQNLGCFHKRLNKDMVRRCYNLI 156
L + V LG +NK+MV RCY L+
Sbjct: 251 LAVLAENQFLVFNSALGESEIPVNKEMVMRCYELM 285
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 14/163 (8%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++ K W L+SVACL++AAK+EET VP LLD Q+ E ++++F+ KT+ RMELL++S+
Sbjct: 124 LQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEE--TKYVFEAKTIQRMELLILST 181
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIA 120
L+W++ +TP FV + I ++ N + + L++S + F+ PS +A
Sbjct: 182 LEWKMHLITPISFVDHIIRRLGLKN---NAHWDFLNKCHRLLLSVISDSRFVGYLPSVVA 238
Query: 121 AAVVLWATDH-------SVDEQNLGCFHKRLNKDMVRRCYNLI 156
AA ++ + S LG + L K+ V+ CY+LI
Sbjct: 239 AATMMRIIEQVDPFDPLSYQTNLLGVLN--LTKEKVKTCYDLI 279
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 13/178 (7%)
Query: 2 KPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSL 61
+ K W L ++ACL++AAK+EE VP LLD Q+ E +R++F+ KT+ RMELLV+S+L
Sbjct: 124 QTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEE--ARYVFEAKTIQRMELLVLSTL 181
Query: 62 KWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAA 121
WR+ VTP F + I + S + + F S +L++S FL+ PS +A
Sbjct: 182 DWRMHPVTPISFFDHIIRRYSFKSHHQLEF---LSRCESLLLSIIPDSRFLSFSPSVLAT 238
Query: 122 AVV------LWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIRKNR-SQLLHINSVQKP 172
A++ L D +V + L K ++ + V +CY L+ + S+ +N +Q+P
Sbjct: 239 AIMVSVIRDLKMCDEAVYQSQLMTLLK-VDSEKVNKCYELVLDHSPSKKRMMNWMQQP 295
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++ K W L++VA L++AAK+EE VP LLDLQ+ E +R+LF+ KT+ RMELL++S+
Sbjct: 133 LQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEE--ARYLFEAKTIQRMELLILST 190
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIA 120
L+WR+ VTP F + I + Q+ F L+IS F+ PS +A
Sbjct: 191 LQWRMHPVTPISFFDHIIRRFGSKWHQQLDFC---RKCERLLISVIADTRFMRYFPSVLA 247
Query: 121 AAVVLWATDH-----SVDEQNLGCFHKRLNKDMVRRCYNLI 156
A+++ + V+ Q+ ++N++ V CY L+
Sbjct: 248 TAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELL 288
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 26/194 (13%)
Query: 5 KGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWR 64
K W LLSVACL++AAK+EE P L + +L ++ ++ RMELLV+++LKW+
Sbjct: 141 KEWALQLLSVACLSLAAKVEERRPPRLPEFKLD------MYDCASLMRMELLVLTTLKWQ 194
Query: 65 LCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVV 124
+ T TPF +++ F +K + D ++ A I ++ VI + PSTIA A +
Sbjct: 195 MITETPFSYLNCFTAKF-----RHDERKAIVLRAIECIFASIKVISSVGYQPSTIALAAI 249
Query: 125 LWA----TDHSVDEQN--LGCFHKRLNKDMVRRCYN--LIRKNRSQLLHINSVQKPEHVA 176
L A T ++DE +G ++L+ V CYN +I+++R S+Q VA
Sbjct: 250 LIARNKETAPNLDELKSVVGSLWQQLDTGHVYSCYNKMMIQEDR-------SMQSTTEVA 302
Query: 177 VNDKLKVVFGGSCD 190
+ GGS D
Sbjct: 303 SSGVSVAHIGGSED 316
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ +A+KM+ET L + +S +P + +MELL ++
Sbjct: 91 VEPTKKTRLQLLGATCMFLASKMKETVPLTAEKLCIYTDNS---VRPGELLQMELLALNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIA 120
LKW L +VTP DF+ +F++K+ + HA + T ++F+A PPS IA
Sbjct: 148 LKWDLASVTPHDFIEHFLAKLPIHQSSKQILR---KHAQTFVALCATDVNFIASPPSMIA 204
Query: 121 AAVV--------LWATDHSVDEQNLGCFHK---RLNKDMVRRCYNLIRKNRSQLLHINSV 169
A V L +TD + QNL F R + D +R C I LL +
Sbjct: 205 AGSVAAAVQGLYLKSTDSCLSSQNLTNFLSQVIRSDPDCLRSCQEQIES----LLESSLR 260
Query: 170 QKPEHVAVNDK 180
Q +H++ K
Sbjct: 261 QAQQHISTETK 271
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++ + W LLSVACL++AAKMEE VP L F+FKP + + ELL++S+
Sbjct: 111 LQKDETWAMRLLSVACLSLAAKMEERIVPGL---SQYPQDHDFVFKPDVIRKTELLILST 167
Query: 61 LKWRLCTVTPFDFVHYFISKISCFN 85
L W++ +TPF + +YF++KIS N
Sbjct: 168 LDWKMNLITPFHYFNYFLAKISQDN 192
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 21/169 (12%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKME--ETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVM 58
M K W L+S++C++++AKM + SV +L P F + + RME +++
Sbjct: 94 MPQSKPWILKLISLSCVSLSAKMRKPDMSVSDL-------PVEGEFFDAQMIERMENVIL 146
Query: 59 SSLKWRLCTVTPFDFVHYFISKISCFNPQRDGF---GSVFSHAAALIISTRTVIDFLACP 115
+LKWR+ +VTPF F+ +FIS + D S+ S + L S + I FL
Sbjct: 147 GALKWRMRSVTPFSFLAFFISLFEL--KEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFK 204
Query: 116 PSTIAAAVVLWATDHSVDEQNLGCFHKRL------NKDMVRRCYNLIRK 158
PS IA A +L+A+ Q CF R+ NKD + CY I++
Sbjct: 205 PSVIAGAALLFASFELCPLQ-FPCFSNRINQCTYVNKDELMECYKAIQE 252
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 7 WQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLC 66
W LLS+AC++VAAKMEE P L + + +F ++ RMELLV+S+L WR+
Sbjct: 144 WAARLLSIACVSVAAKMEEYQSPALSEF---DAGGGRVFCSDSIRRMELLVLSTLGWRMG 200
Query: 67 TVTPFDFVHYFISKI 81
VTPFDF+ F S++
Sbjct: 201 AVTPFDFLPCFSSRL 215
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 2 KPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSL 61
+P K + LL C+ VA+KM+ET L + +S +P + +MELL+++ L
Sbjct: 92 EPLKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPDELLQMELLLVNKL 148
Query: 62 KWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAA 121
KW L +TP DF+ +F++K+ D + HA + T + F++ PPS IAA
Sbjct: 149 KWNLAAMTPHDFIEHFLTKMPL---AEDTKQIIRKHAQTFVALCATDVKFISNPPSMIAA 205
Query: 122 AVVLWA 127
V+ A
Sbjct: 206 GSVVAA 211
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 7 WQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLC 66
W LL+VAC+++AAKMEE P L + + + F + RMELLV+S+L WR+
Sbjct: 153 WAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMA 212
Query: 67 TVTPFDFVHYFISKI 81
VTPFD++ S++
Sbjct: 213 AVTPFDYLPCLSSRL 227
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 7 WQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLC 66
W LL+++CL +AAKM+ + + D+Q E F+F + RME +V+++L+WR
Sbjct: 102 WAPRLLAISCLTLAAKMQRAAAISAADIQRGE---EFMFDEAKIQRMEQMVLNALEWRTR 158
Query: 67 TVTPFDFVHYFISKISCFNPQ 87
+VTP F+ +F+S +CF PQ
Sbjct: 159 SVTPLAFLGFFLS--ACF-PQ 176
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 5 KGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWR 64
+ W ++SV CL++A K++E ++P+L DLQ+ E + F+ T+ MEL ++ +L+WR
Sbjct: 126 EEWMVEVVSVGCLSLACKLDEVTIPSLHDLQM-EEAMGHSFRASTIRDMELTLLKALRWR 184
Query: 65 LCTVTPFDFV 74
L VTPF F+
Sbjct: 185 LACVTPFSFL 194
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 5 KGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWR 64
K W LL C+ +A+KM+ET L + +S +P + MEL V++ LKW
Sbjct: 94 KSW-LQLLGATCMFLASKMKETIPLTAEKLCIYTDNS---IRPDELLIMELRVLNKLKWD 149
Query: 65 LCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVV 124
L +VTP DF+ +F++K+ D + HA + T ++F++ PPS IAA V
Sbjct: 150 LASVTPHDFIEHFLNKMPL---TEDTKQIIRKHAQTFVALCATDVNFISNPPSMIAAGSV 206
Query: 125 LWATDHSVDEQNLG 138
A V NLG
Sbjct: 207 AAA----VQGLNLG 216
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 22 KMEETSVPNLLDLQL-----IEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHY 76
K+EET VP LLDLQL +P+ ++F+ KTV RMELLV+S+L WR+ VTP ++
Sbjct: 137 KVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYLQP 196
Query: 77 FIS 79
+
Sbjct: 197 LLG 199
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P LL C+ +A+K++ETS L + +S KP+ + EL+V+ LK
Sbjct: 92 PTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNS---IKPQELLEWELVVLGKLK 148
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L VTP DF+ + + K+ QR+ + HA I T F PPS IA
Sbjct: 149 WNLAAVTPHDFIEHILRKLP---QQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATG 205
Query: 123 VV 124
V
Sbjct: 206 SV 207
>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
Length = 295
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ VA+KM+ET L + +S +P + +MELL+++
Sbjct: 91 LEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPDELLQMELLLVNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPS 117
LKW L +TP DF+ +F+SK+ + + HA + T + F++ PPS
Sbjct: 148 LKWNLAAMTPHDFIEHFLSKMPVAEENKQ---IIRKHAQTFVALCATDVKFISNPPS 201
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ VA+KM+ET L + +S +P+ + +MELL+++
Sbjct: 91 LEPLKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPEELLQMELLLVNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVF-SHAAALIISTRTVIDFLACPPSTI 119
LKW L +TP DF+ +F+SK+ P+ D + HA + T + F++ PPS +
Sbjct: 148 LKWNLAAMTPHDFIEHFLSKM----PEADENKQIIRKHAQTFVALCATDVKFISNPPSMV 203
Query: 120 AAAVVLWA 127
AA V+ A
Sbjct: 204 AAGSVVAA 211
>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
Length = 295
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ VA+KM+ET L + +S +P+ + +MELL+++
Sbjct: 91 LEPLKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPEELLQMELLLVNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRD-GFGSVFSHAAALIISTRTVIDFLACPPSTI 119
LKW L +TP DF+ +F+SK+ P+ D ++ HA + T + F++ PPS +
Sbjct: 148 LKWNLAAMTPHDFIEHFLSKM----PEADENKQTIRKHAQTFVALCATDVKFISNPPSMV 203
Query: 120 AAAVVLWA 127
AA V+ A
Sbjct: 204 AAGSVVAA 211
>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
Length = 295
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ VA+KM+ET L + +S +P + MEL++++
Sbjct: 91 LEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPDELLHMELVLVNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPS 117
LKW L +TP DF+ +F+SK+ + + HA + T + F++ PPS
Sbjct: 148 LKWNLAAMTPHDFIEHFLSKMPVAEENKQ---IIRKHAQTFVALCATDVKFISNPPS 201
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P LL C+ +A+K++ET L + +S KP+ + EL+V+ LK
Sbjct: 91 PTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNS---VKPQELLEWELVVLGKLK 147
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L VTP DF+ + + K+ Q++ + HA I T F PPS IA
Sbjct: 148 WNLAAVTPHDFIEHILRKLP---QQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATG 204
Query: 123 VV 124
V
Sbjct: 205 SV 206
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P LL C+ +A+K++ET L + +S KP+ + EL+V+ LK
Sbjct: 91 PTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNS---VKPQELLEWELVVLGKLK 147
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L VTP DF+ + + K+ Q++ + HA I T F PPS IA
Sbjct: 148 WNLAAVTPHDFIEHILRKLP---QQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATG 204
Query: 123 VV 124
V
Sbjct: 205 SV 206
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P + LL C+ +A+K++ET L + +S KP+ + EL+V+ LK
Sbjct: 92 PTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNS---IKPQELLEWELVVLGKLK 148
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L VTP DF+ + + K+ +D + HA I T +F PPS IA
Sbjct: 149 WNLAAVTPHDFIEHILRKLPL---PKDKLVLIRKHAQTFIALCATDFNFAMYPPSMIATG 205
Query: 123 VV 124
V
Sbjct: 206 SV 207
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P LL C+ +A+K++ET L + +S KP+ + EL+V+ LK
Sbjct: 92 PTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNS---IKPQELLEWELVVLGKLK 148
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQ-RDGFGSVFSHAAALIISTRTVIDFLACPPSTIAA 121
W L VTP DF+ + + K+ PQ + + HA I T F PPS IA
Sbjct: 149 WNLAAVTPHDFIEHILRKL----PQPNEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 122 AVV 124
V
Sbjct: 205 GSV 207
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 6 GWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRL 65
W L++V L++A+K E + P L +L++ + +F TV +MEL+++ +L+WR+
Sbjct: 120 NWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTH--MFHVNTVAQMELIILKALEWRV 177
Query: 66 CTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVL 125
VT + F +SKI G + + ++ + L PPS +A A +
Sbjct: 178 NAVTSYTFSQTLVSKIGMV-----GDHMIMNRITNHLLDVICDLKMLQYPPSVVATAAIW 232
Query: 126 WATDHSVDEQNLGCFHKRLNKDMVRRCYNLIRKNR 160
+ V +++ ++ +K+ + +C + + KNR
Sbjct: 233 ILMEDKVCRESIMNLFEQNHKEKIVKCVDGM-KNR 266
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P LL C+ +A+K++ET L + +S KP+ + EL+V+ LK
Sbjct: 92 PTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNS---IKPQELLEWELVVLGKLK 148
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQ-RDGFGSVFSHAAALIISTRTVIDFLACPPSTIAA 121
W L VTP DF+ + + K+ PQ + + HA I T F PPS IA
Sbjct: 149 WNLAAVTPHDFIEHILRKL----PQPSEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 122 AVV 124
V
Sbjct: 205 GSV 207
>sp|P24385|CCND1_HUMAN G1/S-specific cyclin-D1 OS=Homo sapiens GN=CCND1 PE=1 SV=1
Length = 295
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ VA+KM+ET L + +S +P+ + +MELL+++
Sbjct: 91 LEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPEELLQMELLLVNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVF-SHAAALIISTRTVIDFLACPPS 117
LKW L +TP DF+ +F+SK+ P+ + + HA + T + F++ PPS
Sbjct: 148 LKWNLAAMTPHDFIEHFLSKM----PEAEENKQIIRKHAQTFVALCATDVKFISNPPS 201
>sp|Q5R6J5|CCND1_PONAB G1/S-specific cyclin-D1 OS=Pongo abelii GN=CCND1 PE=2 SV=1
Length = 295
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 1 MKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSS 60
++P K + LL C+ VA+KM+ET L + +S +P+ + +MELL+++
Sbjct: 91 LEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNS---IRPEELLQMELLLVNK 147
Query: 61 LKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVF-SHAAALIISTRTVIDFLACPPS 117
LKW L +TP DF+ +F+SK+ P+ + + HA + T + F++ PPS
Sbjct: 148 LKWNLAALTPHDFIEHFLSKM----PEAEENKQIIRKHAQTFVALCATDVKFISNPPS 201
>sp|P53782|CCND2_XENLA G1/S-specific cyclin-D2 OS=Xenopus laevis GN=ccnd2 PE=2 SV=1
Length = 291
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P + LL C+ +A+K++ET L + +S KP+ + EL+V+ LK
Sbjct: 92 PTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNS---IKPQELLEWELVVLGKLK 148
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L VTP DF+ + + K+ +D + HA I T +F PPS IA
Sbjct: 149 WNLAAVTPHDFIEHILRKLP---LPKDKLLLIRKHAQTFIALCATDFNFAMYPPSMIATG 205
Query: 123 VV 124
V
Sbjct: 206 SV 207
>sp|P30281|CCND3_HUMAN G1/S-specific cyclin-D3 OS=Homo sapiens GN=CCND3 PE=1 SV=2
Length = 292
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 12/138 (8%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P + Q LL C+ +A+K+ ET+ + L + + P+ + E+LV+ LK
Sbjct: 93 PTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIY---TDHAVSPRQLRDWEVLVLGKLK 149
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L V DF+ + + ++S RD V HA + T F PPS IA
Sbjct: 150 WDLAAVIAHDFLAFILHRLSL---PRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATG 206
Query: 123 VV------LWATDHSVDE 134
+ L A S DE
Sbjct: 207 SIGAAVQGLGACSMSGDE 224
>sp|Q3MHH5|CCND3_BOVIN G1/S-specific cyclin-D3 OS=Bos taurus GN=CCND3 PE=2 SV=1
Length = 292
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P + Q LL C+ +A+K+ ET+ + L + S P+ + E+LV+ LK
Sbjct: 93 PTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHS---VSPRQLRDWEVLVLGKLK 149
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA 122
W L V DF+ + ++S RD V HA + T F PPS IA
Sbjct: 150 WDLAAVIAHDFLALILHRLSL---PRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATG 206
Query: 123 VV 124
+
Sbjct: 207 SI 208
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 10 HLLSVACLAVAAKMEETS--VPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCT 67
HL+++ CL +A K EE VP + L+ + ++ P+ + +MEL V+ L W L
Sbjct: 150 HLVALCCLHIAVKYEEIEERVPTMSKLR---SWTSNMYSPEIIRKMELAVLIELGWDLGV 206
Query: 68 VTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLAC------------- 114
+TP F+ F++ + G H A R + + C
Sbjct: 207 LTPAHFLESFLALTNGGISD----GDDIEHGDAYKERYREELRYFVCQLYSLCVQDTSLL 262
Query: 115 --PPSTIAAAVVLWATDH 130
PPS IA+AV+ A H
Sbjct: 263 NQPPSQIASAVIATARVH 280
>sp|P48961|CCND3_RAT G1/S-specific cyclin-D3 OS=Rattus norvegicus GN=Ccnd3 PE=2 SV=1
Length = 293
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P + Q LL CL +A+K+ ET+ + L + + P + E+LV+ LK
Sbjct: 93 PTRKAQLQLLGTVCLLLASKLRETTPLTIEKLCIYTDQA---MAPWQLREWEVLVLGKLK 149
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIA-- 120
W L V DF+ + ++S + D V HA + T F PPS IA
Sbjct: 150 WDLAAVIAHDFLALILHRLSLPS---DRQALVKKHAQTFLALCATDYTFAMYPPSMIATG 206
Query: 121 ---AAVV-LWATDHSVDE 134
AAV+ L A S DE
Sbjct: 207 SIGAAVLGLGACSMSADE 224
>sp|P30282|CCND3_MOUSE G1/S-specific cyclin-D3 OS=Mus musculus GN=Ccnd3 PE=2 SV=1
Length = 292
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 3 PGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLK 62
P + Q LL CL +A+K+ ET+ + L + + P + E+LV+ LK
Sbjct: 93 PTRKAQLQLLGTVCLLLASKLRETTPLTIEKLCIYTDQA---VAPWQLREWEVLVLGKLK 149
Query: 63 WRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIA-- 120
W L V DF+ + ++S + D V HA + T F PPS IA
Sbjct: 150 WDLAAVIAHDFLALILHRLSLPS---DRQALVKKHAQTFLALCATDYTFAMYPPSMIATG 206
Query: 121 ---AAVV-LWATDHSVDE 134
AAV+ L A S DE
Sbjct: 207 SIGAAVLGLGACSMSADE 224
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 8 QWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCT 67
+ LL + C+ +A+K EE S P L + I ++ + V ME+ V++SL +RL
Sbjct: 254 KLQLLGITCMLIASKYEEISAPRLEEFCFITDNT---YTRLEVLSMEIKVLNSLHFRLSV 310
Query: 68 VTPFDFVHYFISKISCFNP----QRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAV 123
T F+ FI + + + + F A L ++ T + FL PS IAA+
Sbjct: 311 PTTKTFLRRFIRAAQASDKVPLIEMEYLANYF---AELTLTEYTFLRFL---PSLIAASA 364
Query: 124 VL---WATDHS 131
V W D S
Sbjct: 365 VFLARWTLDQS 375
>sp|Q38819|CCA23_ARATH Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2
Length = 450
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 8 QWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCT 67
Q LL + C+ +A+K EE S P + + I ++ + V ME V+ +++ T
Sbjct: 263 QLQLLGITCMLIASKYEEISAPRIEEFCFITDNT---YTRDQVLEMENQVLKHFSFQIYT 319
Query: 68 VTPFDFVHYFI--SKISCFNPQRDGFGSVFSHAAALIISTRTVID--FLACPPSTIAAAV 123
TP F+ F+ ++ S +P S+ A ++ T+ID FL PS +AA+
Sbjct: 320 PTPKTFLRRFLRAAQASRLSP------SLEVEFLASYLTELTLIDYHFLKFLPSVVAASA 373
Query: 124 VL---WATDHS 131
V W D S
Sbjct: 374 VFLAKWTMDQS 384
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 10 HLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVT 69
L+ + L +A+K+EE P L + + + + + RMEL+++ +LKW LC VT
Sbjct: 186 QLIGITSLFIASKLEEIYAPKLQEFAYVTDGA---CSEEDILRMELIILKALKWELCPVT 242
Query: 70 PFDFVHYFIS 79
+++ F+
Sbjct: 243 IISWLNLFLQ 252
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 10 HLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVT 69
LL V C+ +AAK EE VP + D I ++ + + ME V++ LK+ L T T
Sbjct: 255 QLLGVTCMMIAAKYEEVCVPQVEDFCYITDNT---YLRNELLEMESSVLNYLKFELTTPT 311
Query: 70 PFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDF--LACPPSTIAAAVVLWA 127
F+ F+ R S+ S A ++ +++D+ L PS +AA+ V A
Sbjct: 312 AKCFLRRFLRAAQ----GRKEVPSLLSECLACYLTELSLLDYAMLRYAPSLVAASAVFLA 367
>sp|Q5E9K7|CCNE2_BOVIN G1/S-specific cyclin-E2 OS=Bos taurus GN=CCNE2 PE=2 SV=1
Length = 404
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 10 HLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVT 69
L+ + L +A+K+EE P L + + + + + RMEL ++ +LKW LC VT
Sbjct: 186 QLIGITSLFIASKLEEIYAPKLQEFAYVTDGA---CSEEDILRMELAILKALKWELCPVT 242
Query: 70 PFDFVHYFIS 79
+++ F+
Sbjct: 243 VISWLNLFLQ 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,432,909
Number of Sequences: 539616
Number of extensions: 2511947
Number of successful extensions: 6465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 6319
Number of HSP's gapped (non-prelim): 102
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)