Query 029600
Match_columns 191
No_of_seqs 113 out of 1085
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 01:43:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 1E-43 3.6E-48 331.8 15.0 175 3-190 50-228 (547)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 1.9E-43 6.5E-48 330.0 15.8 174 3-190 50-227 (546)
3 1iok_A Chaperonin 60; chaperon 100.0 1.5E-43 5.2E-48 330.5 11.6 175 3-190 51-229 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 5E-43 1.7E-47 326.8 14.1 174 3-190 50-227 (543)
5 3iyg_H T-complex protein 1 sub 100.0 8.2E-40 2.8E-44 303.3 14.7 170 3-190 51-237 (515)
6 3p9d_D T-complex protein 1 sub 100.0 2.2E-39 7.7E-44 301.1 11.7 169 3-190 59-243 (528)
7 3ko1_A Chaperonin; 9-fold symm 100.0 6.1E-39 2.1E-43 299.8 14.4 168 3-190 70-255 (553)
8 3ruv_A Chaperonin, CPN; double 100.0 4.9E-39 1.7E-43 299.7 12.3 167 3-190 59-241 (543)
9 3p9d_G T-complex protein 1 sub 100.0 5.8E-40 2E-44 306.4 6.0 170 3-190 64-250 (550)
10 1a6d_A Thermosome (alpha subun 100.0 2.6E-38 8.7E-43 295.0 14.4 166 3-190 62-245 (545)
11 3iyg_B T-complex protein 1 sub 100.0 3.7E-38 1.3E-42 291.9 15.2 166 3-190 52-233 (513)
12 1q3q_A Thermosome alpha subuni 100.0 2.7E-38 9.2E-43 295.0 13.1 167 3-190 63-248 (548)
13 3aq1_B Thermosome subunit; gro 100.0 2.2E-38 7.4E-43 292.7 12.2 167 3-190 13-199 (500)
14 3p9d_B T-complex protein 1 sub 100.0 1.4E-38 4.9E-43 295.4 10.0 166 3-190 58-240 (527)
15 1a6d_B Thermosome (beta subuni 100.0 7.1E-38 2.4E-42 291.8 13.9 167 3-190 61-246 (543)
16 3iyg_A T-complex protein 1 sub 100.0 2.3E-37 7.8E-42 287.5 14.9 168 3-190 50-237 (529)
17 3p9d_A T-complex protein 1 sub 100.0 2.6E-38 8.8E-43 295.8 6.8 168 3-190 64-253 (559)
18 3iyg_D T-complex protein 1 sub 100.0 3.7E-37 1.3E-41 285.6 13.4 167 3-190 51-234 (518)
19 3iyg_Z T-complex protein 1 sub 100.0 4E-37 1.4E-41 285.3 12.4 167 3-190 50-231 (517)
20 3iyg_Q T-complex protein 1 sub 100.0 4.1E-37 1.4E-41 284.8 12.4 165 3-190 51-232 (512)
21 3iyg_G T-complex protein 1 sub 100.0 7.8E-36 2.7E-40 276.5 14.6 168 3-190 49-235 (515)
22 3iyg_E T-complex protein 1 sub 100.0 2.7E-36 9.2E-41 279.4 11.2 168 3-190 50-235 (515)
23 3p9d_C T-complex protein 1 sub 100.0 1.7E-36 5.7E-41 285.4 8.9 167 3-190 59-252 (590)
24 3p9d_E T-complex protein 1 sub 100.0 6.9E-36 2.4E-40 279.5 10.4 174 3-190 85-278 (562)
25 3p9d_F T-complex protein 1 sub 100.0 1.2E-36 4.1E-41 283.6 1.7 168 3-190 57-242 (546)
26 3p9d_H T-complex protein 1 sub 100.0 3.1E-35 1.1E-39 275.4 8.9 165 3-190 66-256 (568)
27 2jpu_A ORF C02003 protein; sol 26.3 1.1E+02 0.0037 23.0 5.0 38 52-92 5-42 (129)
28 2w84_A Peroxisomal membrane pr 21.9 95 0.0033 21.0 3.5 23 43-65 3-25 (70)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1e-43 Score=331.76 Aligned_cols=175 Identities=29% Similarity=0.438 Sum_probs=170.5
Q ss_pred chhhhhhhhccCCCc----ccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHH
Q 029600 3 RLAFSLASKVRLPNN----RIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRK 78 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP----~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~ 78 (191)
.||+||||+|+++|| +||++ +++|++||+++||| |||+||||++||+++.+++ ++|+||+.|++
T Consensus 50 nDG~tIlk~i~~~hp~en~~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~Ll~ea~~lv--~~GihP~~I~~ 117 (547)
T 1kp8_A 50 KDGVSVAREIELEDKFENMGAQMV-KEVASKANDAAGDG---------TTTATVLAQAIITEGLKAV--AAGMNPMDLKR 117 (547)
T ss_dssp CCHHHHHHHCCCSSHHHHHHHHHH-HHHHHHHHHHHSSC---------HHHHHHHHHHHHHHHHHHH--HTTCCHHHHHH
T ss_pred cCHHHHHHHccccChhhhHHHHHH-HHHHHhhccccCCC---------cchhHHHHHHHHHHHHHHH--HCCCCHHHHHH
Confidence 699999999999999 99999 99999999999999 9999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCHHHHHHHhHhcCCCchhHHHHHHHHHHHhhhcCCcEEEecCCCcCeeeEEEEeEEEcc
Q 029600 79 GVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIFITEGKEPGVKLNLYSGFKLDW 158 (191)
Q Consensus 79 G~~~a~~~vl~~L~~~a~~i~~~~~l~~vA~ts~~~d~~i~~li~~a~~~vg~~~g~I~i~~g~~~~~~~~lv~G~~~d~ 158 (191)
||++|++.+++.|+++++++++.++|.+||++|+++++.+|+++++|+.+|+. +|.|+|++|++.++++++++||+||+
T Consensus 118 G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~-dg~I~Ve~G~~~~ds~~lveG~~fdk 196 (547)
T 1kp8_A 118 GIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGK-EGVITVEDGTGLQDELDVVEGMQFDR 196 (547)
T ss_dssp HHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCT-TSEEEEECCSSSSCEEEEESCEEESC
T ss_pred HHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCc-CCcEEEEeCCccccccEEEecEEEec
Confidence 99999999999999999999999999999999999899999999999999998 89999999999988779999999999
Q ss_pred cccCCccccccccCceEecCeEEEEEcccccc
Q 029600 159 GYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 159 gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
||.||||+|++++|+++++|||||++|++|+.
T Consensus 197 g~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~ 228 (547)
T 1kp8_A 197 GYLSPYFINKPETGAVELESPFILLADKKISN 228 (547)
T ss_dssp CBSSTTCCSBTTTTBEEEESCEEECEESEECC
T ss_pred CccccccccCcccCceEecCceEEEEcCcCCC
Confidence 99999999999999999999999999999874
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.9e-43 Score=330.00 Aligned_cols=174 Identities=30% Similarity=0.470 Sum_probs=151.2
Q ss_pred chhhhhhhhccCCCcc----cchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHH
Q 029600 3 RLAFSLASKVRLPNNR----IKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRK 78 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~----akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~ 78 (191)
.||+||||+|+++||+ ||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++
T Consensus 50 nDG~TIlk~i~v~hp~~n~gAkll-~e~a~~qd~e~GDG---------TTtvvVLAgeLL~ea~~li--~~GihP~~I~~ 117 (546)
T 3rtk_A 50 NDGVSIAKEIELEDPYEKIGAELV-KEVAKKTDDVAGDG---------TTTATVLAQALVREGLRNV--AAGANPLGLKR 117 (546)
T ss_dssp -----------CCCHHHHHHHHHH-HHHHTSCC----------------CHHHHHHHHHHHHHHHHH--TTTCCHHHHHH
T ss_pred CcHHHHHHHccCCChhhhHHHHHH-HHHHHhhhhhhCCC---------cchHHHHHHHHHHHHHHHH--HCCCCHHHHHH
Confidence 6999999999999998 9999 99999999999999 9999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCHHHHHHHhHhcCCCchhHHHHHHHHHHHhhhcCCcEEEecCCCcCeeeEEEEeEEEcc
Q 029600 79 GVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIFITEGKEPGVKLNLYSGFKLDW 158 (191)
Q Consensus 79 G~~~a~~~vl~~L~~~a~~i~~~~~l~~vA~ts~~~d~~i~~li~~a~~~vg~~~g~I~i~~g~~~~~~~~lv~G~~~d~ 158 (191)
||++|++.+++.|+++|+++++.++|.+||++|++ ++.+|+++++|+.+|+. +|.|+|+++++..+++++++||+||+
T Consensus 118 G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~-dgvI~Ve~~~~~~~ds~lveGm~fdk 195 (546)
T 3rtk_A 118 GIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGN-EGVITVEESNTFGLQLELTEGMRFDK 195 (546)
T ss_dssp HHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCT-TSEEEEECCSSSSCEEEEECEEEESC
T ss_pred HHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhcc-CCceEEEecCCcccceEEeeeEEEcC
Confidence 99999999999999999999999999999999998 88999999999999999 89999998888878899999999999
Q ss_pred cccCCccccccccCceEecCeEEEEEcccccc
Q 029600 159 GYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 159 gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
||.||||+|++++|+++++|||||++|++|+.
T Consensus 196 g~~sp~~vt~~e~m~~~len~kIll~d~kIs~ 227 (546)
T 3rtk_A 196 GYISGYFVTDPERQEAVLEDPYILLVSSKVST 227 (546)
T ss_dssp CBSSGGGCSBTTTTBEEEESCEEEEBSSEECC
T ss_pred CccCcccccCcccCeeEecccEEEEECCccCC
Confidence 99999999999999999999999999998864
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.5e-43 Score=330.49 Aligned_cols=175 Identities=30% Similarity=0.477 Sum_probs=170.0
Q ss_pred chhhhhhhhccCCCc----ccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHH
Q 029600 3 RLAFSLASKVRLPNN----RIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRK 78 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP----~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~ 78 (191)
.||+||||+|+++|| +||++ +++|++||+++||| |||+||||++||+++.+++ ++|+||+.|++
T Consensus 51 nDG~tIlk~i~~~hp~en~~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~Ll~ea~~li--~~GihP~~I~~ 118 (545)
T 1iok_A 51 KDGVSVAKEIELSDKFENMGAQMV-REVASRTNDEAGDG---------TTTATVLAQAIVREGLKAV--AAGMNPMDLKR 118 (545)
T ss_dssp CCHHHHHHHCCCSSHHHHHHHHHH-HHHHHHGGGGCSTH---------HHHHHHHHHHHHHHHHHHH--HTTCCHHHHHH
T ss_pred CCHHHHHHHhccCChhhHHHHHHH-HHHHHhhccccCCC---------cchHHHHHHHHHHHHHHHH--HCCCCHHHHHH
Confidence 699999999999999 99999 99999999999999 9999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCHHHHHHHhHhcCCCchhHHHHHHHHHHHhhhcCCcEEEecCCCcCeeeEEEEeEEEcc
Q 029600 79 GVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIFITEGKEPGVKLNLYSGFKLDW 158 (191)
Q Consensus 79 G~~~a~~~vl~~L~~~a~~i~~~~~l~~vA~ts~~~d~~i~~li~~a~~~vg~~~g~I~i~~g~~~~~~~~lv~G~~~d~ 158 (191)
||++|++.+++.|+++++++++.++|.+||++|+++++.+++++++|+.+|+. +|.|+|++|++.++++++++|++||+
T Consensus 119 G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~-~g~I~Ve~G~~~~ds~~lveG~~~dk 197 (545)
T 1iok_A 119 GIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGN-EGVITVEENKGMETEVEVVEGMQFDR 197 (545)
T ss_dssp HHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCT-TSCCCCEECSSSCCEEEEECCEECSC
T ss_pred HHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhcc-CCeEEEEeCCccccceEEEecEEEec
Confidence 99999999999999999999988899999999999899999999999999998 89999999999988779999999999
Q ss_pred cccCCccccccccCceEecCeEEEEEcccccc
Q 029600 159 GYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 159 gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
||.||||+|++++|+++++|||||++|++|+.
T Consensus 198 g~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~ 229 (545)
T 1iok_A 198 GYLSPYFVTNADKMIAELEDAYILLHEKKLSS 229 (545)
T ss_dssp CCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC
T ss_pred CccccccccCcccCceeecCCeEEEEcCCcCC
Confidence 99999999999999999999999999999874
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5e-43 Score=326.80 Aligned_cols=174 Identities=28% Similarity=0.447 Sum_probs=169.2
Q ss_pred chhhhhhhhccCCCc----ccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHH
Q 029600 3 RLAFSLASKVRLPNN----RIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRK 78 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP----~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~ 78 (191)
.||+||||+|+++|| +||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++
T Consensus 50 nDG~tIlk~i~~~hp~en~~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~LL~ea~~li--~~GihP~~I~~ 117 (543)
T 1we3_A 50 KDGVTVAKEVELEDHLENIGAQLL-KEVASKTNDVAGDG---------TTTATVLAQAIVREGLKNV--AAGANPLALKR 117 (543)
T ss_dssp CCHHHHHHHCCCSSHHHHHHHHHH-HHHHHHHHHHHSSC---------HHHHHHHHHHHHHHHHHHH--HTTCCHHHHHH
T ss_pred cCHHHHHHHcccCChHHhHHHHHH-HHHHHhhheecCCC---------cchHHHHHHHHHHHHHHHH--HCCCCHHHHHH
Confidence 699999999999999 99999 99999999999999 9999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCHHHHHHHhHhcCCCchhHHHHHHHHHHHhhhcCCcEEEecCCCcCeeeEEEEeEEEcc
Q 029600 79 GVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIFITEGKEPGVKLNLYSGFKLDW 158 (191)
Q Consensus 79 G~~~a~~~vl~~L~~~a~~i~~~~~l~~vA~ts~~~d~~i~~li~~a~~~vg~~~g~I~i~~g~~~~~~~~lv~G~~~d~ 158 (191)
||++|++.+++.|+++++++++.++|.+||++|++ ++.+|+++++|+.+|+. +|.|++++|++.++++++++||+||+
T Consensus 118 G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~-~g~I~Ve~G~~~~ds~~lv~G~~~dk 195 (543)
T 1we3_A 118 GIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGK-EGIITVEESKSLETELKFVEGYQFDK 195 (543)
T ss_dssp HHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCT-TSEEEEEECSSSSCEEEEECSEEESC
T ss_pred HHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCc-CCcEEEecCCccccceEEEcCEEEec
Confidence 99999999999999999999999999999999998 89999999999999998 89999999999988789999999999
Q ss_pred cccCCccccccccCceEecCeEEEEEcccccc
Q 029600 159 GYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 159 gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
||.||||+|++++|+++++|||||++|++|+.
T Consensus 196 g~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~ 227 (543)
T 1we3_A 196 GYISPYFVTNPETMEAVLEDAFILIVEKKVSN 227 (543)
T ss_dssp CBSSGGGCSBTTTTBCCEEEEEEEEESSCBCC
T ss_pred CccccccccCcccCceeecCceEEEECCCcCC
Confidence 99999999999999999999999999998864
No 5
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.2e-40 Score=303.25 Aligned_cols=170 Identities=15% Similarity=0.169 Sum_probs=155.4
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 51 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~~~GDG---------TTtvvVLA~~Ll~~a~~li--~~GihP~~I~~G~~~ 118 (515)
T 3iyg_H 51 NDGATILKLLDVVHPAAKTL-VDIAKSQDAEVGDG---------TTSVTLLAAEFLKQVKPYV--EEGLHPQIIIRAFRT 118 (515)
T ss_pred CCHHHHHHHccCCCHHHHHH-HHHHHHhhceeCcc---------hhhHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC--C----HHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC---CcEEEec--CCCcC
Q 029600 83 AVDSVLENLSRSAQMIS--T----SEEIAQVATTSIN------GDKDIGALVARTIELVRKAE---GHIFITE--GKEPG 145 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~--~----~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~---g~I~i~~--g~~~~ 145 (191)
|++.+++.|++++.+++ + .+.|.+||+||++ +++.||+++++|+.+|+. + +.|.|++ |+...
T Consensus 119 A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~-~~d~~~I~V~k~~Gg~~~ 197 (515)
T 3iyg_H 119 ATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDD-LLQLKMIGIKKVQGGALE 197 (515)
T ss_pred HHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcc-cCCcceEEEEecCCCCcc
Confidence 99999999999999994 5 5677999999885 468899999999999986 5 7888874 55554
Q ss_pred eeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 146 VKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 146 ~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
++++++||+||+||.||||+++|+ +++||||+++|++|+.
T Consensus 198 -ds~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~ 237 (515)
T 3iyg_H 198 -ESQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVELEL 237 (515)
T ss_pred -ceEEEeeeEEecCccCcccccCCc----cccccEEEEEcccccc
Confidence 689999999999999999987655 8999999999998763
No 6
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.2e-39 Score=301.10 Aligned_cols=169 Identities=14% Similarity=0.154 Sum_probs=155.9
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 59 nDG~tIlk~i~v~hP~akll-~e~a~~qd~e~GDG---------TTtvvVLA~~Ll~~a~~li--~~GihP~~I~~G~~~ 126 (528)
T 3p9d_D 59 NDGHTILKQMAILHPVARML-VEVSAAQDSEAGDG---------TTSVVILTGALLGAAERLL--NKGIHPTIIADSFQS 126 (528)
T ss_dssp CCHHHHHHHSCCCCTTHHHH-HHHHHHHHHHTCSC---------SHHHHHHHHHHHHHHHHHH--TTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHcccCCHHHHHH-HHHHHHhhhhhCCC---------hhhHHHHHHHHHHHHHHHH--HCCCChHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC--CHHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhc-CCcEEEec-------CCCcCe
Q 029600 83 AVDSVLENLSRSAQMIS--TSEEIAQVATTSING------DKDIGALVARTIELVRKA-EGHIFITE-------GKEPGV 146 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~--~~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~-~g~I~i~~-------g~~~~~ 146 (191)
|++.+++.|++++.+++ +.+.|.++|+||+++ ++.||+++++|+.+|+.. +|.|+++. |++..
T Consensus 127 A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~- 205 (528)
T 3p9d_D 127 AAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID- 205 (528)
T ss_dssp HHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-
T ss_pred HHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-
Confidence 99999999999999998 789999999999985 588999999999999852 35555443 87776
Q ss_pred eeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 147 KLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 147 ~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
++++++||+||+||.|||| |+++++||||+++|++|+.
T Consensus 206 ds~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~ 243 (528)
T 3p9d_D 206 DTEMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISP 243 (528)
T ss_dssp CCEEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSC
T ss_pred ceEEEeeeEEeecccCccc------CcccccCceEEEEeccccc
Confidence 5899999999999999997 7889999999999999874
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=6.1e-39 Score=299.78 Aligned_cols=168 Identities=18% Similarity=0.229 Sum_probs=155.3
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 70 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~eLL~~a~~li--~~GihP~~I~~G~~~ 137 (553)
T 3ko1_A 70 NDGATILDKMDLQHPAAKLL-VQIAKGQDEETADG---------TKTAVIFSGELVKKAEDLL--YKDVHPTIIISGYKK 137 (553)
T ss_dssp CCHHHHHHSSCCCSHHHHHH-HHHHHTCSSSSSTT---------HHHHHHHHHHHHHHHHHHH--HTTCCHHHHHHHHHH
T ss_pred cCccchhhhhhccChhHHHH-HHHhhCCcccccCC---------ceeEEEehHHHHHhHHHHH--hcCCCceEEehhhhH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC--CHHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhc-CCc-------EEEe--cCCCc
Q 029600 83 AVDSVLENLSRSAQMIS--TSEEIAQVATTSING------DKDIGALVARTIELVRKA-EGH-------IFIT--EGKEP 144 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~--~~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~-~g~-------I~i~--~g~~~ 144 (191)
|++.+++.|++++.+++ +.+.|.++|+||+++ ++.||+++++|+.+|+.+ +|. |+|+ .|+..
T Consensus 138 A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~ 217 (553)
T 3ko1_A 138 AEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI 217 (553)
T ss_dssp HHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc
Confidence 99999999999999998 789999999999985 688999999999999972 266 8887 45555
Q ss_pred CeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 145 GVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 145 ~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+++++++||+||+||.|||| +++++||||+++|++|+.
T Consensus 218 -~ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~d~~Le~ 255 (553)
T 3ko1_A 218 -NDTQLVYGIVVDKEVVHPGM-------PKRLENAKIALIDASLEV 255 (553)
T ss_dssp -GGCEEESEEEECSCBSCTTS-------CSCCBSCEEEEECSCBSC
T ss_pred -ccceeeEEEEecccccCCCC-------ccccccceEEEecCcccc
Confidence 46999999999999999986 668999999999998754
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=4.9e-39 Score=299.67 Aligned_cols=167 Identities=20% Similarity=0.253 Sum_probs=155.3
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 59 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~Ll~~a~~ll--~~GihP~~I~~G~~~ 126 (543)
T 3ruv_A 59 NDGVTILREMSVEHPAAKML-IEVAKTQEKEVGDG---------TTTAVVVAGELLRKAEELL--DQNVHPTIVVKGYQA 126 (543)
T ss_dssp CCHHHHHHHSCCCCHHHHHH-HHHHHHHHHHTSSC---------HHHHHHHHHHHHHHHHHHH--TTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHccCcCHHHHHH-HHHHHHHHhhhCCC---------cccHHHHHHHHHHHHHHHH--hCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC--CHHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhcC-Cc-----EEEe--cCCCcCe
Q 029600 83 AVDSVLENLSRSAQMIS--TSEEIAQVATTSING------DKDIGALVARTIELVRKAE-GH-----IFIT--EGKEPGV 146 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~--~~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~~-g~-----I~i~--~g~~~~~ 146 (191)
|++.+++.|+++|++++ +.++|.++|+||+++ ++.||+++++|+.+|+. + |. |+|+ .|+.. +
T Consensus 127 A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~-~~g~~dl~~I~V~k~~Gg~~-~ 204 (543)
T 3ruv_A 127 AAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVD-DEGKVDKDLIKIEKKSGASI-D 204 (543)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCC-TTSCCCGGGEEEEEEECSCG-G
T ss_pred HHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhc-cCCCcccceEEEEEcCCCCc-c
Confidence 99999999999999998 789999999999974 68899999999999997 5 65 8876 56665 4
Q ss_pred eeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 147 KLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 147 ~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
++++++||+||++|.|||| +++++||||+++|++|+.
T Consensus 205 ds~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~~~Le~ 241 (543)
T 3ruv_A 205 DTELIKGVLVDKERVSAQM-------PKKVTDAKIALLNCAIEI 241 (543)
T ss_dssp GCEEESSEEESCCCSCTTS-------CSEEEEEEEEEESSCBSC
T ss_pred cceeecceEEeccccCccc-------cccccCcEEEEEcccccc
Confidence 6999999999999999986 668999999999998754
No 9
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.8e-40 Score=306.43 Aligned_cols=170 Identities=18% Similarity=0.192 Sum_probs=152.8
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 64 nDG~TIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~Ll~~a~~lv--~~GihP~~I~~G~~~ 131 (550)
T 3p9d_G 64 NDGATILKLLDVVHPAAKTL-VDISRAQDAEVGDG---------TTSVTILAGELMKEAKPFL--EEGISSHLIMKGYRK 131 (550)
T ss_dssp CCHHHHTTTSCCCSHHHHHH-HHHHHHHHTTTSSC---------HHHHHHHHHHHHHTTSHHH--HSSSCTTHHHHHHHH
T ss_pred CCHHHHHHHccCCCHHHHHH-HHHHHHhhhhhCCC---------ceehHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCCC-----HHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC------CcEEEecCCCcC
Q 029600 83 AVDSVLENLSRSAQMIST-----SEEIAQVATTSIN------GDKDIGALVARTIELVRKAE------GHIFITEGKEPG 145 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~~-----~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~------g~I~i~~g~~~~ 145 (191)
|++.+++.|++++.+++. .+.|.++|+||++ +++.||+++++|+.+|++++ +.++++ |++.+
T Consensus 132 A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~-Gg~~~ 210 (550)
T 3p9d_G 132 AVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIP-GGAME 210 (550)
T ss_dssp HHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCC-SSCGG
T ss_pred HHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEec-CCCcc
Confidence 999999999999999863 6789999999875 36889999999999998423 555554 77776
Q ss_pred eeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 146 VKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 146 ~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+ +++++||+||+||.||||++.++ .++|||||++|++|+.
T Consensus 211 d-s~lv~G~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~ 250 (550)
T 3p9d_G 211 E-SLFINGVAFKKTFSYAGFEQQPK----KFNNPKILSLNVELEL 250 (550)
T ss_dssp G-CCCCSSEEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSC
T ss_pred c-eeEEeeEEEeccccccccccCcc----cccCceEEEecccccc
Confidence 5 69999999999999999987555 6999999999999763
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.6e-38 Score=294.95 Aligned_cols=166 Identities=17% Similarity=0.250 Sum_probs=154.4
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||+++.+++ ++|+||+.|++||++
T Consensus 62 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvvLA~~LL~~a~~ll--~~GihP~~I~~G~~~ 129 (545)
T 1a6d_A 62 NDGATILKEMDVEHPTAKMI-VEVSKAQDTAVGDG---------TTTAVVLSGELLKQAETLL--DQGVHPTVISNGYRL 129 (545)
T ss_dssp CCHHHHHHHSCCCSHHHHHH-HGGGGCTTTCSTTH---------HHHHHHHHHHHHHHHHHHH--HHTCCHHHHHHHHHH
T ss_pred CcHHHHHHhhhccchHHHHH-HHHHHhcCCEECCC---------hhHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC-CHHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC---------CcEEEe--cCCCc
Q 029600 83 AVDSVLENLSRSAQMIS-TSEEIAQVATTSIN------GDKDIGALVARTIELVRKAE---------GHIFIT--EGKEP 144 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~-~~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~---------g~I~i~--~g~~~ 144 (191)
|++.+++.|++++.+ + +.+.|.++|+||++ +++.|++++++|+.+|++ + +.|+|+ +|++.
T Consensus 130 A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~-~~~g~~~~d~~~I~V~k~~G~~~ 207 (545)
T 1a6d_A 130 AVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAE-VRDGKTIVDTANIKVDKKNGGSV 207 (545)
T ss_dssp HHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCE-ESSSSEECCGGGEEEEECCCSCS
T ss_pred HHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhc-ccCCCcccccceEEEEEecCCCc
Confidence 999999999999999 7 78999999998864 468899999999999987 4 378887 78888
Q ss_pred CeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 145 GVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 145 ~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
. ++++++||+||++|.|||| +.+++||||+++|++|+.
T Consensus 208 ~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~ 245 (545)
T 1a6d_A 208 N-DTQFISGIVIDKEKVHSKM-------PDVVKNAKIALIDSALEI 245 (545)
T ss_dssp T-TCEEESEEEESCCCSCTTS-------CSEEEEEEEEEECSCBSC
T ss_pred e-eeEEEeeEEEeccCCCCCC-------cceecCCEEEEEecCCCc
Confidence 6 4799999999999999997 457999999999999764
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.7e-38 Score=291.95 Aligned_cols=166 Identities=19% Similarity=0.212 Sum_probs=152.9
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 52 nDG~tIlk~i~v~hp~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~LL~~a~~li--~~GihP~~I~~G~~~ 119 (513)
T 3iyg_B 52 NDGATILKNIGVDNPAAKVL-VDMSRVQDDEVGDG---------TTSVTVLAAELLREAESLI--AKKIHPQTIIAGWRE 119 (513)
T ss_pred CCHHHHHHHccccCHHHHHH-HHHHHHhhhhhCCC---------hhhhHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC-----CHHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC---CcEEEec--CCCcCe
Q 029600 83 AVDSVLENLSRSAQMIS-----TSEEIAQVATTSIN------GDKDIGALVARTIELVRKAE---GHIFITE--GKEPGV 146 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~-----~~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~---g~I~i~~--g~~~~~ 146 (191)
|++.+++.|++++++++ +.+.|.++|+||++ +++.||+++++|+.+|+. + +.|.|++ |+...
T Consensus 120 A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~-~~d~~~I~V~ki~gg~~~- 197 (513)
T 3iyg_B 120 ATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKG-SGNLEAIHVIKKLGGSLA- 197 (513)
T ss_pred HHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcc-cCCcCeEEEEEeCCCCcc-
Confidence 99999999999999997 57899999998885 357899999999999998 6 7888864 66654
Q ss_pred eeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 147 KLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 147 ~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
++++++||+||++|.|| |+.+++||||+++|++|+.
T Consensus 198 ds~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~~Le~ 233 (513)
T 3iyg_B 198 DSYLDEGFLLDKKIGVN--------QPKRIENAKILIANTGMDT 233 (513)
T ss_pred ceeEEeeEEEeccccCC--------CceeecCceEEEEcCCccc
Confidence 58999999999999987 5779999999999998764
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.7e-38 Score=294.97 Aligned_cols=167 Identities=20% Similarity=0.258 Sum_probs=155.0
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||+++.+++ ++|+||+.|++||++
T Consensus 63 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvvLA~~LL~~a~~ll--~~GihP~~I~~G~~~ 130 (548)
T 1q3q_A 63 NDCATILDKIDLQHPAAKMM-VEVAKTQDKEAGDG---------TTTAVVIAGELLRKAEELL--DQNIHPSIITKGYAL 130 (548)
T ss_dssp SCHHHHHHHSCCCSHHHHHH-HHHHHHHHHHTSSC---------HHHHHHHHHHHHHHHHHHH--HTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHhhccchHHHHH-HHHHHhcCCEECCC---------hhHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCCC--HHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC--C-------cEEEe--cCCC
Q 029600 83 AVDSVLENLSRSAQMIST--SEEIAQVATTSIN------GDKDIGALVARTIELVRKAE--G-------HIFIT--EGKE 143 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~~--~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~--g-------~I~i~--~g~~ 143 (191)
|++.+++.|++++.+++. .++|.++|+||++ +++.|++++++|+.+|++ + | .|+|+ +|++
T Consensus 131 A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~-~~~g~~~~d~~~I~V~k~~G~~ 209 (548)
T 1q3q_A 131 AAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAE-KKDGKYVVDLDNIKFEKKAGEG 209 (548)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCE-ESSSSEECCGGGEEEEEEEBSC
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhcc-ccCCCccccCCeEEEEEecCCC
Confidence 999999999999999974 8899999998865 468899999999999987 4 4 78887 8888
Q ss_pred cCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 144 PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 144 ~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
.+ ++++++||+||++|.|||| +.+++||||+++|++|+.
T Consensus 210 ~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~ 248 (548)
T 1q3q_A 210 VE-ESELVRGVVIDKEVVHPRM-------PKRVENAKIALINEALEV 248 (548)
T ss_dssp GG-GCEEESSEEESCCCSSTTS-------CSEESSEEEEEECSCBSC
T ss_pred cc-ceEEEeeEEEeccCCCCCC-------cceecCCEEEEEecCcCc
Confidence 86 5799999999999999997 458999999999999764
No 13
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.2e-38 Score=292.69 Aligned_cols=167 Identities=19% Similarity=0.224 Sum_probs=124.8
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 13 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvvLa~~LL~~a~~ll--~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 13 NDGATILKEMDIQHPAAKMI-VEVSKTQDAEVGDG---------TTTAAVLSGELLSKAEELI--MKGVHSTIISEGYRH 80 (500)
T ss_dssp -------------------------------CCHH---------HHHHHHHHHHHHHHHHHHH--TTTCCHHHHHHHHHH
T ss_pred CcHHHHHHhCcCCCHHHHHH-HHHHHhhhhhhCCC---------hHHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC--CHHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC--Cc--------EEEe--cCC
Q 029600 83 AVDSVLENLSRSAQMIS--TSEEIAQVATTSIN------GDKDIGALVARTIELVRKAE--GH--------IFIT--EGK 142 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~--~~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~--g~--------I~i~--~g~ 142 (191)
|++.+++.|++++++++ +.+.|.++|+||++ +++.+++++++|+.+++. + |. |+|+ +|+
T Consensus 81 A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~-~~~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVE-EEEDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEE-CCSSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcc-cccCCccccccccEEEEEecCC
Confidence 99999999999999987 48899999998865 478899999999999986 4 43 6776 788
Q ss_pred CcCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 143 EPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 143 ~~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+.. ++++++||+||++|.|||| +.+++||||+++|++|+.
T Consensus 160 ~~~-ds~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~ 199 (500)
T 3aq1_B 160 SID-DSELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEF 199 (500)
T ss_dssp CGG-GCEEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC
T ss_pred Ccc-ceEEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccc
Confidence 885 6999999999999999987 668999999999999764
No 14
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.4e-38 Score=295.41 Aligned_cols=166 Identities=22% Similarity=0.306 Sum_probs=151.4
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhc-CCChHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENA-ELDDTEIRKGVQ 81 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~-g~~p~~I~~G~~ 81 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++ |+||+.|++||+
T Consensus 58 nDG~tIlk~i~~~hP~Akll-~e~a~~qd~~~GDG---------TTtavVLA~~Ll~ea~~lv--~~~GihP~~I~~G~~ 125 (527)
T 3p9d_B 58 NDGATILKSIPLDNPAAKVL-VNISKVQDDEVGDG---------TTSVTVLSAELLREAEKLI--DQSKIHPQTIIEGYR 125 (527)
T ss_dssp CCHHHHHHTCCCCCHHHHHH-HHHHHHHHHHTCSC---------TTTTTHHHHHHHHHHHHHT--C---CCHHHHHHHHH
T ss_pred CCHHHHHHHhccCCHHHHHH-HHHHHHhHhhhCCc---------HhHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHH
Confidence 58999999999999999999 99999999999999 9999999999999999999 99 999999999999
Q ss_pred HHHHHHHHHHhhccccCCC-----HHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhcCC---cEEEec--CCCcC
Q 029600 82 MAVDSVLENLSRSAQMIST-----SEEIAQVATTSING------DKDIGALVARTIELVRKAEG---HIFITE--GKEPG 145 (191)
Q Consensus 82 ~a~~~vl~~L~~~a~~i~~-----~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~~g---~I~i~~--g~~~~ 145 (191)
+|++.+++.|++++.++++ .++|.+||+||+++ ++.||+++++|+.+|+. ++ .|+|++ |+...
T Consensus 126 ~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~-~~~~~~I~V~k~~gg~~~ 204 (527)
T 3p9d_B 126 LASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKG-STNLEHIQIIKILGGKLS 204 (527)
T ss_dssp HHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCT-TCCTTSSCCCBCCCSSSS
T ss_pred HHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcc-cCCcceEEEEEcCCCCcc
Confidence 9999999999999999986 78999999999985 67899999999999998 76 788764 66664
Q ss_pred eeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 146 VKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 146 ~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
++++++||+||+||.||| |+ +++||+|+++|++|+.
T Consensus 205 -ds~lv~G~~~dk~~~~~~----p~----~~~n~kIlll~~~le~ 240 (527)
T 3p9d_B 205 -DSFLDEGFILAKKFGNNQ----PK----RIENAKILIANTTLDT 240 (527)
T ss_dssp -CCCEESSCCCSCCCSSSC----CS----CCSSCEEEEECSCSSC
T ss_pred -ccEEEEeEEEecccCCCC----Ce----eeecceEEEecccccc
Confidence 589999999999999997 33 5689999999998874
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=7.1e-38 Score=291.76 Aligned_cols=167 Identities=16% Similarity=0.258 Sum_probs=154.4
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 61 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvvLA~~LL~~a~~ll--~~GihP~~I~~G~~~ 128 (543)
T 1a6d_B 61 NDGVTILKEMDVEHPAAKMM-VEVSKTQDSFVGDG---------TTTAVIIAGGLLQQAQGLI--NQNVHPTVISEGYRM 128 (543)
T ss_dssp CCHHHHHHHSCCCSHHHHHH-HHHHTCTTCCCTTH---------HHHHHHHHHHHHHHHHHHH--HTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHhhccchHHHHH-HHHHHhcCCEECCC---------hhHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCCC--HHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcC--Cc-------EEEe--cCCC
Q 029600 83 AVDSVLENLSRSAQMIST--SEEIAQVATTSIN------GDKDIGALVARTIELVRKAE--GH-------IFIT--EGKE 143 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~~--~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~--g~-------I~i~--~g~~ 143 (191)
|++.+++.|++++.+++. .+.|.++|+||++ +++.|++++++|+.++++ + |. |+|+ +|++
T Consensus 129 A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~-~~~g~~~~d~~~I~V~k~~G~~ 207 (543)
T 1a6d_B 129 ASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAE-LRDGKYYVDFDNIQVVKKQGGA 207 (543)
T ss_dssp HHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEE-ECSSSEEECGGGEEEEEEESSC
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcc-cccCCcccccceEEEEEecCCC
Confidence 999999999999999974 7899999998764 468899999999999987 4 53 8887 8888
Q ss_pred cCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 144 PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 144 ~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
.. ++++++||+||++|.|||| +.+++||||+++|++|+.
T Consensus 208 ~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~ 246 (543)
T 1a6d_B 208 ID-DTQLINGIIVDKEKVHPGM-------PDVVKDAKIALLDAPLEI 246 (543)
T ss_dssp GG-GCEEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBSC
T ss_pred cc-ceeEEccEEEecCCCCCCC-------cceecCCeEEEEeccccc
Confidence 86 5799999999999999997 457999999999999764
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-37 Score=287.54 Aligned_cols=168 Identities=15% Similarity=0.185 Sum_probs=152.3
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 50 nDG~tIlk~i~v~hP~akll-~~~a~~qd~e~GDG---------TTtvvvLA~eLL~~a~~li--~~GihP~~I~~G~~~ 117 (529)
T 3iyg_A 50 NDGATILKLLEVEHPAAKVL-CELADLQDKEVGDG---------TTSVVIIAAELLKNADELV--KQKIHPTSVISGYRL 117 (529)
T ss_pred CCHHHHHHHcccCChHHHHH-HHHHHHhhhhhCCC---------hhhHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhh-ccccCC--CHHHHHHHhHhcCC------CchhHHHHHHHHHHHhhh--cCC-----c--EEEe--cCC
Q 029600 83 AVDSVLENLSR-SAQMIS--TSEEIAQVATTSIN------GDKDIGALVARTIELVRK--AEG-----H--IFIT--EGK 142 (191)
Q Consensus 83 a~~~vl~~L~~-~a~~i~--~~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~--~~g-----~--I~i~--~g~ 142 (191)
|++.+++.|++ ++.+++ +.+.|.++|+||++ +++.||+++++|+.+|+. ++| . |.|+ .|+
T Consensus 118 A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~ 197 (529)
T 3iyg_A 118 ACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGR 197 (529)
T ss_pred HHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCC
Confidence 99999999999 999987 68899999999985 468899999999999982 134 2 6664 576
Q ss_pred CcCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 143 EPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 143 ~~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+.. ++++++||+||++|.||+| +..++||||+++|++|+.
T Consensus 198 ~~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIlll~~~le~ 237 (529)
T 3iyg_A 198 SQM-ESMLINGYALNCVVGSQGM-------PKRIVNAKIACLDFSLQK 237 (529)
T ss_pred Ccc-ceEEEeeeEEecCcccccC-------CcccCCceEEEecCCccc
Confidence 665 5899999999999999987 458899999999998864
No 17
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.6e-38 Score=295.80 Aligned_cols=168 Identities=15% Similarity=0.217 Sum_probs=152.5
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 64 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~LL~~a~~li--~~GihP~~I~~G~~~ 131 (559)
T 3p9d_A 64 NDGATILSLLDVQHPAGKIL-VELAQQQDREIGDG---------TTSVVIIASELLKRANELV--KNKIHPTTIITGFRV 131 (559)
T ss_dssp CCHHHHHHHHCCCSHHHHHH-HHHHHHHHHHTSSC---------HHHHHHHHHHHHHHHHHHH--TTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHhcCCCHHHHHH-HHHHHHHHHHcCCC---------cchHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 69999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhh-ccccCCC--HHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhc----CCc-----EEEe--cCC
Q 029600 83 AVDSVLENLSR-SAQMIST--SEEIAQVATTSING------DKDIGALVARTIELVRKA----EGH-----IFIT--EGK 142 (191)
Q Consensus 83 a~~~vl~~L~~-~a~~i~~--~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~----~g~-----I~i~--~g~ 142 (191)
|++.+++.|++ ++++++. .+.|.+||+||+++ ++.||+|+++|+.+|+++ +|. |.|+ .|+
T Consensus 132 A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Gg 211 (559)
T 3p9d_A 132 ALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGK 211 (559)
T ss_dssp HHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESS
T ss_pred HHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCC
Confidence 99999999999 9999985 67899999999985 788999999999999831 244 3443 388
Q ss_pred CcCeeeEEEEeEEEcccccCCccccccccCceEec--CeEEEEEcccccc
Q 029600 143 EPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQS--STYLFLYGETFRL 190 (191)
Q Consensus 143 ~~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~--~p~Ill~d~~i~~ 190 (191)
+.. ++++++||+||+||.|||| +.+++ ||||+++|++|+.
T Consensus 212 s~~-ds~lv~G~v~dk~~~~~~m-------~~~ie~~n~kIll~~~~Le~ 253 (559)
T 3p9d_A 212 SAT-ESLLVPGYALNCTVASQAM-------PKRIAGGNVKIACLDLNLQK 253 (559)
T ss_dssp CSS-CCBCCSEECCCCCCSSTTS-------CSEECSSSBCEEEETTCCSC
T ss_pred Ccc-ceeEeccEEEeecccCCCc-------ceeeccCCceEEEEeccccc
Confidence 876 4899999999999999996 56888 9999999999863
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-37 Score=285.55 Aligned_cols=167 Identities=16% Similarity=0.158 Sum_probs=151.5
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 51 nDG~tIlk~i~v~hP~akll-~~~a~~qd~~~GDG---------TTtvvVLA~~Ll~~a~~li--~~GihP~~I~~G~~~ 118 (518)
T 3iyg_D 51 NDGATILKQMQVLHPAARML-VELSKAQDIEAGDG---------TTSVVIIAGSLLDSCTKLL--QKGIHPTIISESFQK 118 (518)
T ss_pred CCHHHHHHHcccchHHHHHH-HHHHHHhhhhhCCC---------ceeHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC--CHHHHHHHhHhcCCCc------hhHHHHHHHHHHHhhhc--CCc-----EEEe--cCCCcC
Q 029600 83 AVDSVLENLSRSAQMIS--TSEEIAQVATTSINGD------KDIGALVARTIELVRKA--EGH-----IFIT--EGKEPG 145 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~--~~~~l~~vA~ts~~~d------~~i~~li~~a~~~vg~~--~g~-----I~i~--~g~~~~ 145 (191)
|++.+++.|++++.+++ +.++|.++|+||++++ +.||+++++|+.+|+.. +|. |+|+ .|+...
T Consensus 119 A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ 198 (518)
T 3iyg_D 119 ALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTID 198 (518)
T ss_pred HHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChh
Confidence 99999999999999998 7889999999999864 78999999999999852 454 6665 466654
Q ss_pred eeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 146 VKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 146 ~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
++++++||+||+||.| . ||.+++||+|+++|++|+.
T Consensus 199 -ds~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~Le~ 234 (518)
T 3iyg_D 199 -DCELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFCLSA 234 (518)
T ss_pred -hheEeccEEEeccccc-C-------CCccccCceEEEEEeeccc
Confidence 6999999999999998 3 4557899999999998864
No 19
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4e-37 Score=285.34 Aligned_cols=167 Identities=17% Similarity=0.228 Sum_probs=143.5
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||++|||++||++|.+++ ++|+||+.|++||++
T Consensus 50 nDG~tIlk~i~v~hp~akll-~~~a~~qd~e~GDG---------TTtvvvLa~~Ll~~a~~li--~~GihP~~I~~G~~~ 117 (517)
T 3iyg_Z 50 KDGNVLLHEMQIQHPTASLI-AKVATAQDDITGDG---------TTSNVLIIGELLKQADLYI--SEGLHPRIITEGFEA 117 (517)
T ss_pred CCHHHHHHHccCcCHHHHHH-HHHHHHHHHHhCCC---------ceeHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHH
Confidence 58999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC-CHHHHHHHhHhcCCCc------hhHHHHHHHHHHHhhhcCC------cEEEe--cCCCcCee
Q 029600 83 AVDSVLENLSRSAQMIS-TSEEIAQVATTSINGD------KDIGALVARTIELVRKAEG------HIFIT--EGKEPGVK 147 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~-~~~~l~~vA~ts~~~d------~~i~~li~~a~~~vg~~~g------~I~i~--~g~~~~~~ 147 (191)
|++.+++.|++++.+++ +.+.|.++|+||+++. +.+++++.+|+..|.. .+ .|.|. .|+.. ++
T Consensus 118 A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~-~~~~~dl~~I~I~k~~Gg~~-~d 195 (517)
T 3iyg_Z 118 AKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKK-QDEPIDLFMVEIMEMKHKSE-TD 195 (517)
T ss_pred HHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheecc-CCCcCChhHheeeeecCCCc-cc
Confidence 99999999999999988 7889999999999742 3455555555555432 11 12222 34444 56
Q ss_pred eEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 148 LNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 148 ~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+++++||+||+||.||+ |+++++|||||++|++|+.
T Consensus 196 s~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 196 TSLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEY 231 (517)
T ss_pred cceEeeEEEeccCCCCC-------ccccccCCeEEEecccccc
Confidence 99999999999999998 4779999999999999863
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.1e-37 Score=284.75 Aligned_cols=165 Identities=18% Similarity=0.236 Sum_probs=149.2
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 51 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~~~GDG---------TTtvvVLA~~Ll~~a~~lv--~~GihP~~I~~G~~~ 118 (512)
T 3iyg_Q 51 NDAATILRELEVQHPAAKMI-VMASHMQEQEVGDG---------TNFVLVFAGALLELAEELL--RLGLSVSEVIEGYEI 118 (512)
T ss_pred CCHHHHHHHcccCCHHHHHH-HHHHHHhhhhhCCC---------hhHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhc----cccCCCHHHHHHHhHhcCCC-----chhHHHHHHHHHHHhhhcC-CcEEEec-------CCCcC
Q 029600 83 AVDSVLENLSRS----AQMISTSEEIAQVATTSING-----DKDIGALVARTIELVRKAE-GHIFITE-------GKEPG 145 (191)
Q Consensus 83 a~~~vl~~L~~~----a~~i~~~~~l~~vA~ts~~~-----d~~i~~li~~a~~~vg~~~-g~I~i~~-------g~~~~ 145 (191)
|++.+++.|+++ +.+++++++|.++|+||+++ ++.||+++++|+.+|++ + +.|+++. |++.
T Consensus 119 A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~-~~~~i~v~~I~i~k~~Ggs~- 196 (512)
T 3iyg_Q 119 ACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFP-DSGHFNVDNIRVCKILGSGV- 196 (512)
T ss_pred HHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhc-cCCcccHhHeeEeeccCCCc-
Confidence 999999999998 66777899999999999986 68899999999999997 5 5565443 7776
Q ss_pred eeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 146 VKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 146 ~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+++++++||+||+||.| | +...+||+|+++|++++.
T Consensus 197 ~ds~lv~G~~~dk~~~~--~-------~~~~~n~kI~ll~~~le~ 232 (512)
T 3iyg_Q 197 HSSSVLHGMVFKKETEG--D-------VTSVKDAKIAVYSCPFDG 232 (512)
T ss_pred ccceEEeeEEEecCcCC--C-------CcccccCceEEEeccccc
Confidence 57999999999999976 5 446788999999988753
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.8e-36 Score=276.48 Aligned_cols=168 Identities=13% Similarity=0.179 Sum_probs=148.6
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 49 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvvLAgeLL~~a~~ll--~~GihP~~I~~G~~~ 116 (515)
T 3iyg_G 49 NDGNAILREIQVQHPAAKSM-IEISRTQDEEVGDG---------TTSVIILAGEMLSVAEHFL--EQQMHPTVVISAYRK 116 (515)
T ss_pred CCHHHHHHhcccCCHHHHHH-HHHHHHhhhhhCCC---------hhhHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCCC--HHHHHHHhHhcCCC------chhHHHHHHHHHHHhhh-cCC--------cEEEe--cCCC
Q 029600 83 AVDSVLENLSRSAQMIST--SEEIAQVATTSING------DKDIGALVARTIELVRK-AEG--------HIFIT--EGKE 143 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~~--~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~-~~g--------~I~i~--~g~~ 143 (191)
|++.+++.|++++.+++. .+.|.++|+||+++ ...+++++.+|+..|.. .++ .|.|+ +|++
T Consensus 117 A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs 196 (515)
T 3iyg_G 117 ALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGI 196 (515)
T ss_pred HHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCC
Confidence 999999999999999874 68999999999973 23456788999988762 112 14554 5777
Q ss_pred cCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 144 PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 144 ~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
.. ++++++||+||++|.||. |+++++||||+++|++|+.
T Consensus 197 ~~-ds~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 197 IE-DSCVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred cc-cceEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 75 699999999999999996 5789999999999998764
No 22
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-36 Score=279.44 Aligned_cols=168 Identities=18% Similarity=0.240 Sum_probs=146.6
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 50 nDG~tIlk~i~~~hP~Akll-~~~a~~qd~~~GDG---------TTtvvVLA~~Ll~~a~~li--~~GihP~~I~~G~~~ 117 (515)
T 3iyg_E 50 NDGATILSMMDVDHQIAKLM-VELSKSQDDEIGDG---------TTGVVVLAGALLEEAEQLL--DRGIHPIRIADGYEQ 117 (515)
T ss_pred CcHHHHHHHcccCCHHHHHH-HHHHHHhhhhhCCc---------hhHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCCC----HHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhcC------CcEEEe--cCCCc
Q 029600 83 AVDSVLENLSRSAQMIST----SEEIAQVATTSING------DKDIGALVARTIELVRKAE------GHIFIT--EGKEP 144 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~~----~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~~------g~I~i~--~g~~~ 144 (191)
|++.+++.|+++|.+++. .++|.++|+||+++ .+.+++++++|+..|...+ +.|.|+ .|++.
T Consensus 118 A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~ 197 (515)
T 3iyg_E 118 AARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRL 197 (515)
T ss_pred HHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCc
Confidence 999999999999998853 68999999999984 2567788888888875411 235554 47777
Q ss_pred CeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 145 GVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 145 ~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
. ++++++||+||+||.||||++ ..++|+|+++|++++.
T Consensus 198 ~-ds~lv~G~~~dk~~~~~~m~~-------~~~~~kIall~~~le~ 235 (515)
T 3iyg_E 198 E-DTKLIKGVIVDKDFSHPQMPK-------QVEDAKIAILTCPFEP 235 (515)
T ss_pred c-cceEEeeEEEecccccccccc-------cCCCceEEEEcCcccc
Confidence 5 589999999999999999844 5677888888887753
No 23
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.7e-36 Score=285.35 Aligned_cols=167 Identities=13% Similarity=0.153 Sum_probs=149.7
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHh-chhhcCCChHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNL-LLENAELDDTEIRKGVQ 81 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~l-i~~~~g~~p~~I~~G~~ 81 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.++ + ++|+||+.|++||+
T Consensus 59 nDG~TIlk~i~~~hP~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~eLL~~a~~l~l--~~GihP~~I~~G~~ 126 (590)
T 3p9d_C 59 NDGHAILREIDVAHPAAKSM-LELSRTQDEEVGDG---------TTTVIILAGEILAQCAPYLI--EKNIHPVIIIQALK 126 (590)
T ss_dssp CCHHHHHHHSCCCCHHHHTH-HHHTTTHHHHCSSC---------HHHHHHHHHHHHHHHHHHHH--SCCCCHHHHHHHHH
T ss_pred CCHHHHHHHhhCCCHHHHHH-HHHHHhhhhhhCCC---------ccchHHHHHHHHhhhHHhhh--hcCCCHHHHHHHHH
Confidence 69999999999999999999 99999999999999 999999999999999999 9 99999999999999
Q ss_pred HHHHHHHHHHhhccccCCC--HHHHHHHhHhcCC------CchhHHHHHHHHHHHhhhcCCcE----------------E
Q 029600 82 MAVDSVLENLSRSAQMIST--SEEIAQVATTSIN------GDKDIGALVARTIELVRKAEGHI----------------F 137 (191)
Q Consensus 82 ~a~~~vl~~L~~~a~~i~~--~~~l~~vA~ts~~------~d~~i~~li~~a~~~vg~~~g~I----------------~ 137 (191)
+|++.+++.|++++.+++. .+.|.++|+||++ +++.||+++++|+.+|+. ++.+ .
T Consensus 127 ~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~-~~~~~~~~~~~~~vDl~~~I~ 205 (590)
T 3p9d_C 127 KALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRK-DLGQTVEGEPNFEIDIKRYVR 205 (590)
T ss_dssp HHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTT-CC-----------CCCSSSSC
T ss_pred HHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcc-cccCccccccccccchhhceE
Confidence 9999999999999999874 6889999999875 368899999999999997 6533 2
Q ss_pred Ee--cCCCcCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 138 IT--EGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 138 i~--~g~~~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
|+ .|++.. ++++++||+||+++.+|. |+++++||||+++|++|+.
T Consensus 206 I~ki~Ggs~~-ds~lv~Gmvfdk~~~~~~-------m~~~~en~kIll~d~~Le~ 252 (590)
T 3p9d_C 206 VEKIPGGDVL-DSRVLKGVLLNKDVVHPK-------MSRHIENPRVVLLDCPLEY 252 (590)
T ss_dssp EEEESSCCGG-GCBCCSSEEECCCCSCTT-------SCSCEESCCEECCCCCCSC
T ss_pred EEEecCCCcc-cceeeeEEEEecccCCCC-------CcceeeeeEEEEEcccccc
Confidence 32 377765 589999999999977763 6889999999999998753
No 24
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.9e-36 Score=279.53 Aligned_cols=174 Identities=19% Similarity=0.201 Sum_probs=150.2
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+||||+|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 85 nDG~tIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvVLA~~LL~~a~~li--~~GihP~~I~~G~~~ 152 (562)
T 3p9d_E 85 NDGATILSQMELDNEIAKLL-VQLSKSQDDEIGDG---------TTGVVVLASALLDQALELI--QKGIHPIKIANGFDE 152 (562)
T ss_dssp SCHHHHHHHSCCCSHHHHHH-HHHHHHHHHHTSSC---------TTHHHHHHHHHHHHHHHHH--TTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHccCCCHHHHHH-HHHHHHHHhhcCCC---------cccHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCCCH------HHHHHHhHhcCCC------chhHHHHHHHHHHHhhhcC------CcEEEe--cCC
Q 029600 83 AVDSVLENLSRSAQMISTS------EEIAQVATTSING------DKDIGALVARTIELVRKAE------GHIFIT--EGK 142 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~~~------~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~~------g~I~i~--~g~ 142 (191)
|++.+++.|+++|.++++. +.|.++|+||+++ .+.+++++++|+..|...+ +.|.|+ .|+
T Consensus 153 A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Gg 232 (562)
T 3p9d_E 153 AAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGG 232 (562)
T ss_dssp HHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSS
T ss_pred HHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCC
Confidence 9999999999999998642 6899999999984 3568999999999886411 245554 587
Q ss_pred CcCeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 143 EPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 143 ~~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
+..+ +++++||+||+||.||||+++.+ .+..+++|+|+++|++++.
T Consensus 233 s~~d-s~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~ 278 (562)
T 3p9d_E 233 SISD-SKLINGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEP 278 (562)
T ss_dssp CGGG-CEEESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSS
T ss_pred Chhh-hceeeeEEEecCCCCCCcCcccc-cccccccceEEEecccccc
Confidence 7764 79999999999999999976542 1224589999999998865
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.2e-36 Score=283.63 Aligned_cols=168 Identities=15% Similarity=0.204 Sum_probs=149.7
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 57 nDG~tIlk~i~v~hP~akll-~e~a~~qd~e~GDG---------TTtvvVLA~eLL~~a~~li--~~GihP~~I~~G~~~ 124 (546)
T 3p9d_F 57 KDGKVLLTEMQIQSPTAVLI-ARAAAAQDEITGDG---------TTTVVCLVGELLRQAHRFI--QEGVHPRIITDGFEI 124 (546)
T ss_dssp CCHHHHHHTSCCCCHHHHHH-HHHHHHHHHHCSSC---------HHHHHHHHHHHHHHHHHHT--TTTBCHHHHHHHHHH
T ss_pred CCHHHHHHHccCcCHHHHHH-HHHHHHHHHHhCCC---------cccHHHHHHHHHHHHHHHH--hCCCChHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccCC----CHHHHHHHhHhcCCC------chhHHHHHHHHHHHhhhcC------CcEEEe--cCCCc
Q 029600 83 AVDSVLENLSRSAQMIS----TSEEIAQVATTSING------DKDIGALVARTIELVRKAE------GHIFIT--EGKEP 144 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i~----~~~~l~~vA~ts~~~------d~~i~~li~~a~~~vg~~~------g~I~i~--~g~~~ 144 (191)
|++.+++.|++++.+++ +.+.|.+||+||+++ .+.+++++.+|+..|...+ ..|.+. .|+..
T Consensus 125 A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~ 204 (546)
T 3p9d_F 125 ARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP 204 (546)
T ss_dssp HHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT
T ss_pred HHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc
Confidence 99999999999999984 678999999999984 3568999999998886311 135554 46655
Q ss_pred CeeeEEEEeEEEcccccCCccccccccCceEecCeEEEEEcccccc
Q 029600 145 GVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 190 (191)
Q Consensus 145 ~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~~p~Ill~d~~i~~ 190 (191)
. ++++++||+||+||.||+ |+++++||||+++|++|+.
T Consensus 205 ~-ds~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~Le~ 242 (546)
T 3p9d_F 205 K-DTTFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVSLEY 242 (546)
T ss_dssp T-TCCCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCCSSS
T ss_pred c-ccEEEeeEEEeccccccc-------CcceecCceEEEecCcccc
Confidence 4 689999999999999986 5789999999999998864
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.1e-35 Score=275.41 Aligned_cols=165 Identities=17% Similarity=0.206 Sum_probs=148.8
Q ss_pred chhhhhhhhccCCCcccchhhhccccccccccccCCcccCCCCCCcchhehHHHHHHHHHHhchhhcCCChHHHHHHHHH
Q 029600 3 RLAFSLASKVRLPNNRIKVVSGSRLSWSRDYVGDGEDIKFMSPYTKYKTVLAESMCNEGRNLLLENAELDDTEIRKGVQM 82 (191)
Q Consensus 3 ~~~~tIl~~i~i~hP~akll~~~~a~~qd~~vGDG~~~~~~~~~TTT~~vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~ 82 (191)
.||+|||++|+++||+||++ +++|++||+++||| |||+||||++||++|.+++ ++|+||+.|++||++
T Consensus 66 nDG~TIlk~i~v~hP~Akll-~e~a~~qd~e~GDG---------TTtvvvLa~~Ll~~a~~ll--~~GihP~~I~~G~~~ 133 (568)
T 3p9d_H 66 NDAATMLRELDIVHPAVKVL-VMATEQQKIDMGDG---------TNLVMILAGELLNVSEKLI--SMGLSAVEIIQGYNM 133 (568)
T ss_dssp SCHHHHTTTCCCCCHHHHHH-HHHHHHHHTTSSSC---------HHHHHHHHHHHHHHHHHHH--HHTCCHHHHHHHHHH
T ss_pred CCHHHHHHHcccCCHHHHHH-HHHHHhhhceeCCC---------ceehHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 59999999999999999999 99999999999999 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhhccccC----CCHHHHHHHhHhcCC-----CchhHHHHHHHHHHHhhhcC-----C-------cEEEec-
Q 029600 83 AVDSVLENLSRSAQMI----STSEEIAQVATTSIN-----GDKDIGALVARTIELVRKAE-----G-------HIFITE- 140 (191)
Q Consensus 83 a~~~vl~~L~~~a~~i----~~~~~l~~vA~ts~~-----~d~~i~~li~~a~~~vg~~~-----g-------~I~i~~- 140 (191)
|++.+++.|++++.++ ++.+.|.++|+||++ +++.||+++++|+.+|+. + + .|.|+.
T Consensus 134 A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~-~~~~~~~~~~~dl~~I~I~k~ 212 (568)
T 3p9d_H 134 ARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLP-VAQQAGEIPYFNVDSIRVVKI 212 (568)
T ss_dssp HHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC----------CCCGGGCEEEEE
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhh-ccccccCCcccccceEEEEEc
Confidence 9999999999999887 578899999999975 358899999999999986 3 3 577764
Q ss_pred -CCCcCeeeEEEEeEEEcccccCCccccccccCceEec---CeEEEEEcccccc
Q 029600 141 -GKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQS---STYLFLYGETFRL 190 (191)
Q Consensus 141 -g~~~~~~~~lv~G~~~d~gy~s~~fvt~~~~~~~~~~---~p~Ill~d~~i~~ 190 (191)
|++..+ +++++||+|+++|. +|+.+++ ||||+++|++|+.
T Consensus 213 ~Ggs~~d-S~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le~ 256 (568)
T 3p9d_H 213 MGGSLSN-STVIKGMVFNREPE---------GHVKSLSEDKKHKVAVFTCPLDI 256 (568)
T ss_dssp ESSCGGG-CEEESSCCBSSCBS---------SGGGSCCCCSSCEEEEECSCSSS
T ss_pred cCCCcch-heeeccEEEeeccc---------CCcEEEecCCcceEEEEccCccc
Confidence 888764 79999999999984 3577888 9999999999764
No 27
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=26.32 E-value=1.1e+02 Score=23.00 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=25.6
Q ss_pred ehHHHHHHHHHHhchhhcCCChHHHHHHHHHHHHHHHHHHh
Q 029600 52 VLAESMCNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLS 92 (191)
Q Consensus 52 vLa~~ll~e~~~li~~~~g~~p~~I~~G~~~a~~~vl~~L~ 92 (191)
-||..++++|..++ +.| ||.+=.+=+=.|+..+++.|.
T Consensus 5 ~lAe~yL~EA~ell--~kG-D~vQAsEK~ykAaeeaiKALA 42 (129)
T 2jpu_A 5 TSAEVYYEEAEEFL--SKG-DLVQACEKYYKAAEEAIKLLV 42 (129)
T ss_dssp CHHHHHHHHHHHHH--HHT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--hCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999 888 665555444455544444443
No 28
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=21.85 E-value=95 Score=21.05 Aligned_cols=23 Identities=13% Similarity=0.133 Sum_probs=9.9
Q ss_pred CCCCCcchhehHHHHHHHHHHhc
Q 029600 43 MSPYTKYKTVLAESMCNEGRNLL 65 (191)
Q Consensus 43 ~~~~TTT~~vLa~~ll~e~~~li 65 (191)
||+-++.-...=..|+..+.+++
T Consensus 3 m~~~~~~~~~~Re~li~~Av~FL 25 (70)
T 2w84_A 3 MATPGSENVLPREPLIATAVKFL 25 (70)
T ss_dssp ------CCSCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCchHHHHHHHHHHh
Confidence 33334443444566677776665
Done!