Your job contains 1 sequence.
>029609
MAWCSLRSLNVPTIDMGALRTRSRLAAVGIGCASVAGSSVWRSSCKKHSTPFACLSTSAV
SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNI
GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE
IECIAALPNA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029609
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092374 - symbol:AT3G20390 "AT3G20390" species... 685 1.9e-67 1
MGI|MGI:1095401 - symbol:Hrsp12 "heat-responsive protein ... 368 7.4e-34 1
UNIPROTKB|P52758 - symbol:HRSP12 "Ribonuclease UK114" spe... 366 1.2e-33 1
RGD|70940 - symbol:Hrsp12 "heat-responsive protein 12" sp... 357 1.1e-32 1
UNIPROTKB|Q3T114 - symbol:HRSP12 "Ribonuclease UK114" spe... 355 1.8e-32 1
UNIPROTKB|E1C7E1 - symbol:HRSP12 "Uncharacterized protein... 351 4.7e-32 1
UNIPROTKB|F1S0M2 - symbol:HRSP12 "Uncharacterized protein... 349 7.7e-32 1
TIGR_CMR|CHY_2460 - symbol:CHY_2460 "endoribonuclease L-P... 323 4.4e-29 1
UNIPROTKB|H0YB34 - symbol:HRSP12 "Ribonuclease UK114" spe... 315 3.1e-28 1
ZFIN|ZDB-GENE-040718-315 - symbol:hrsp12 "heat-responsive... 315 3.1e-28 1
UNIPROTKB|Q8U308 - symbol:yjgF "Enamine/imine deaminase" ... 305 3.5e-27 1
TIGR_CMR|CPS_4974 - symbol:CPS_4974 "putative endoribonuc... 303 5.7e-27 1
DICTYBASE|DDB_G0277761 - symbol:DDB_G0277761 "endoribonuc... 302 7.3e-27 1
ASPGD|ASPL0000065252 - symbol:AN7040 species:162425 "Emer... 294 5.2e-26 1
UNIPROTKB|P37552 - symbol:yabJ "Enamine/imine deaminase" ... 292 8.4e-26 1
TIGR_CMR|CJE_1579 - symbol:CJE_1579 "endoribonuclease L-P... 290 1.4e-25 1
TIGR_CMR|BA_0046 - symbol:BA_0046 "putative endoribonucle... 287 2.9e-25 1
TIGR_CMR|GSU_2235 - symbol:GSU_2235 "endoribonuclease L-P... 286 3.6e-25 1
TIGR_CMR|CBU_0304 - symbol:CBU_0304 "endoribonuclease L-P... 277 3.3e-24 1
SGD|S000000859 - symbol:HMF1 "Member of the p14.5 protein... 269 2.3e-23 1
TIGR_CMR|SO_0358 - symbol:SO_0358 "endoribonuclease L-PSP... 267 3.8e-23 1
FB|FBgn0086691 - symbol:UK114 "UK114" species:7227 "Droso... 264 7.8e-23 1
ASPGD|ASPL0000015000 - symbol:AN11062 species:162425 "Eme... 259 2.6e-22 1
UNIPROTKB|P0AGL2 - symbol:tdcF "predicted enamine/imine d... 255 7.0e-22 1
UNIPROTKB|P0AGL3 - symbol:tdcF "Putative reactive interme... 255 7.0e-22 1
UNIPROTKB|P0AGL4 - symbol:tdcF "Putative reactive interme... 255 7.0e-22 1
UNIPROTKB|G4MY05 - symbol:MGG_10440 "Endoribonuclease L-P... 253 1.1e-21 1
UNIPROTKB|H0YBX3 - symbol:HRSP12 "Ribonuclease UK114" spe... 252 1.5e-21 1
TIGR_CMR|SO_1404 - symbol:SO_1404 "endoribonuclease L-PSP... 251 1.9e-21 1
SGD|S000001313 - symbol:MMF1 "Mitochondrial protein requi... 248 3.9e-21 1
POMBASE|SPBC2G2.04c - symbol:mmf1 "YjgF family protein Mm... 246 6.3e-21 1
POMBASE|SPAC1039.10 - symbol:mmf2 "homologous Pmf1 factor... 244 1.0e-20 1
UNIPROTKB|P0AF93 - symbol:ridA "predicted enamine/imine d... 242 1.7e-20 1
UNIPROTKB|P0AF94 - symbol:yjgF "Enamine/imine deaminase" ... 242 1.7e-20 1
UNIPROTKB|P0AF95 - symbol:yjgF "Enamine/imine deaminase" ... 242 1.7e-20 1
UNIPROTKB|Q7CP78 - symbol:ridA "Enamine/imine deaminase" ... 241 2.1e-20 1
UNIPROTKB|Q9KP64 - symbol:VC_2512 "Putative uncharacteriz... 233 1.5e-19 1
TIGR_CMR|VC_2512 - symbol:VC_2512 "conserved hypothetical... 233 1.5e-19 1
TIGR_CMR|DET_1052 - symbol:DET_1052 "endoribonuclease L-P... 226 8.3e-19 1
ASPGD|ASPL0000035043 - symbol:AN9080 species:162425 "Emer... 209 5.3e-17 1
UNIPROTKB|G4N2M8 - symbol:MGG_07621 "Endoribonuclease L-P... 190 5.4e-15 1
ASPGD|ASPL0000028527 - symbol:AN5543 species:162425 "Emer... 180 6.2e-14 1
UNIPROTKB|P0AFQ5 - symbol:rutC "predicted aminoacrylate p... 180 6.2e-14 1
UNIPROTKB|Q0BZ17 - symbol:HNE_2586 "Amidohydrolase family... 183 4.5e-13 1
TIGR_CMR|SPO_2709 - symbol:SPO_2709 "endoribonuclease L-P... 153 4.5e-11 1
UNIPROTKB|G4N4Y7 - symbol:MGG_16750 "Uncharacterized prot... 135 3.6e-09 1
UNIPROTKB|P0AEB7 - symbol:yoaB "conserved protein" specie... 126 3.3e-08 1
TIGR_CMR|CPS_2046 - symbol:CPS_2046 "endoribonuclease, L-... 126 3.3e-08 1
TIGR_CMR|SPO_2000 - symbol:SPO_2000 "endoribonuclease L-P... 124 5.3e-08 1
TIGR_CMR|BA_2691 - symbol:BA_2691 "endoribonuclease L-PSP... 123 6.8e-08 1
ASPGD|ASPL0000065512 - symbol:AN7059 species:162425 "Emer... 122 8.7e-08 1
UNIPROTKB|Q8EJW9 - symbol:SO_0337 "YER057c/Yigf/Uk114 fam... 122 8.7e-08 1
TIGR_CMR|SO_0337 - symbol:SO_0337 "conserved hypothetical... 122 8.7e-08 1
TIGR_CMR|CPS_3858 - symbol:CPS_3858 "endoribonuclease, L-... 121 1.1e-07 1
ASPGD|ASPL0000036888 - symbol:AN9123 species:162425 "Emer... 119 1.8e-07 1
UNIPROTKB|O07205 - symbol:MT2777.1 "Conserved protein" sp... 119 1.8e-07 1
TIGR_CMR|SPO_2949 - symbol:SPO_2949 "endoribonuclease L-P... 116 3.8e-07 1
UNIPROTKB|Q9KRT0 - symbol:VC1556 "Putative uncharacterize... 115 4.9e-07 1
TIGR_CMR|VC_1556 - symbol:VC_1556 "conserved hypothetical... 115 4.9e-07 1
TIGR_CMR|SPO_1005 - symbol:SPO_1005 "endoribonuclease L-P... 119 1.4e-06 1
POMBASE|SPBC577.12 - symbol:mug71 "diphthamide synthetase... 126 8.1e-06 1
UNIPROTKB|G4N4I7 - symbol:MGG_05968 "Endoribonuclease L-P... 101 2.3e-05 1
TIGR_CMR|CPS_4240 - symbol:CPS_4240 "endoribonuclease, L-... 97 6.8e-05 1
TIGR_CMR|CPS_3498 - symbol:CPS_3498 "endoribonuclease, L-... 105 8.5e-05 1
SGD|S000004133 - symbol:DPH6 "Diphthamide synthetase" spe... 117 0.00014 1
TIGR_CMR|CJE_0372 - symbol:CJE_0372 "endoribonuclease L-P... 93 0.00019 1
UNIPROTKB|Q81QU0 - symbol:BAS2170 "Uncharacterized protei... 95 0.00035 1
TIGR_CMR|BA_2326 - symbol:BA_2326 "conserved hypothetical... 95 0.00035 1
TIGR_CMR|SPO_A0400 - symbol:SPO_A0400 "endoribonuclease L... 93 0.00078 1
>TAIR|locus:2092374 [details] [associations]
symbol:AT3G20390 "AT3G20390" species:3702 "Arabidopsis
thaliana" [GO:0004521 "endoribonuclease activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739 GO:GO:0005773
GO:GO:0046686 GO:GO:0009570 EMBL:CP002686 GO:GO:0009941
GO:GO:0009579 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
UniGene:At.71273 UniGene:At.8179 EMBL:AF375446 EMBL:AY060547
EMBL:AY086036 EMBL:AK227774 IPI:IPI00529853 RefSeq:NP_188674.1
HSSP:P52758 ProteinModelPortal:Q94JQ4 SMR:Q94JQ4 IntAct:Q94JQ4
STRING:Q94JQ4 PRIDE:Q94JQ4 ProMEX:Q94JQ4 EnsemblPlants:AT3G20390.1
GeneID:821584 KEGG:ath:AT3G20390 TAIR:At3g20390 InParanoid:Q94JQ4
PhylomeDB:Q94JQ4 ProtClustDB:CLSN2684749 Genevestigator:Q94JQ4
Uniprot:Q94JQ4
Length = 187
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 139/189 (73%), Positives = 161/189 (85%)
Query: 1 MAWCSLRSLNVPTIDMG-ALR-TRSRLAAVGIGCASVAGSSVWRSSCKKHSTPFACLSTS 58
M W RS+N PT+D+ ALR TR+ L A G+GCA+ AG S++R S + S PFA LS S
Sbjct: 1 MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSR--SPPFASLSVS 58
Query: 59 AVSNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLK 118
A S KE V T KAPAALGPYSQAIKANNLVF+SGVLGL+PETGKFVS+++EDQTEQVLK
Sbjct: 59 ASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLK 118
Query: 119 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 178
N+GEILKASGADYSSVVKTTI+LADL DFKTVNEIYAKYFP+P+PAR+TYQVAALPL+A+
Sbjct: 119 NMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAK 178
Query: 179 VEIECIAAL 187
+EIECIA L
Sbjct: 179 IEIECIATL 187
>MGI|MGI:1095401 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10090
"Mus musculus" [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 MGI:MGI:1095401
GO:GO:0005739 GO:GO:0005634 GO:GO:0090305 GO:GO:0004519
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ EMBL:U50631
EMBL:BC092375 EMBL:BC125590 EMBL:BC125592 IPI:IPI00130640
RefSeq:NP_032313.2 UniGene:Mm.143977 ProteinModelPortal:P52760
SMR:P52760 IntAct:P52760 STRING:P52760 PhosphoSite:P52760
SWISS-2DPAGE:P52760 PaxDb:P52760 PRIDE:P52760
Ensembl:ENSMUST00000022946 GeneID:15473 KEGG:mmu:15473
UCSC:uc007vlt.2 InParanoid:Q569N4 NextBio:288314 Bgee:P52760
CleanEx:MM_HRSP12 Genevestigator:P52760
GermOnline:ENSMUSG00000022323 Uniprot:P52760
Length = 135
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNI 120
S +++ + T KAPAA+GPYSQA++ + +++SG +GL P +G+ V + ++ +Q LKN+
Sbjct: 3 SIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNL 62
Query: 121 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 180
GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +RVE
Sbjct: 63 GEILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVE 122
Query: 181 IECIA 185
IE IA
Sbjct: 123 IEAIA 127
>UNIPROTKB|P52758 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006449 "regulation
of translational termination" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 EMBL:CH471060
GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006449 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597
OrthoDB:EOG41JZDQ EMBL:X95384 EMBL:AY026764 EMBL:CR456844
EMBL:CR541652 EMBL:BC010280 EMBL:BC012592 EMBL:BC093059
IPI:IPI00005038 RefSeq:NP_005827.1 UniGene:Hs.18426 PDB:1ONI
PDBsum:1ONI ProteinModelPortal:P52758 SMR:P52758 IntAct:P52758
STRING:P52758 PhosphoSite:P52758 DMDM:1717975 UCD-2DPAGE:P52758
PaxDb:P52758 PeptideAtlas:P52758 PRIDE:P52758 DNASU:10247
Ensembl:ENST00000254878 GeneID:10247 KEGG:hsa:10247 UCSC:uc003yii.1
GeneCards:GC08M099183 HGNC:HGNC:16897 HPA:HPA022856 HPA:HPA023489
MIM:602487 neXtProt:NX_P52758 PharmGKB:PA134890258
InParanoid:P52758 PhylomeDB:P52758 EvolutionaryTrace:P52758
GenomeRNAi:10247 NextBio:38824 ArrayExpress:P52758 Bgee:P52758
CleanEx:HS_HRSP12 Genevestigator:P52758 GermOnline:ENSG00000132541
Uniprot:P52758
Length = 137
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 67/125 (53%), Positives = 95/125 (76%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNI 120
S ++ + T KAP A+GPYSQA+ + +++SG +G+ P +G+ VS + ++ +Q LKN+
Sbjct: 3 SLIRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNM 62
Query: 121 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 180
GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S PARA YQVAALP +R+E
Sbjct: 63 GEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIE 122
Query: 181 IECIA 185
IE +A
Sbjct: 123 IEAVA 127
>RGD|70940 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR006056 Pfam:PF01042 RGD:70940
GO:GO:0005739 GO:GO:0005634 GO:GO:0005777 GO:GO:0090305
GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:D49363 EMBL:X70825 EMBL:AF015949 EMBL:BC078779 IPI:IPI00231292
PIR:S30349 RefSeq:NP_113902.1 UniGene:Rn.6987 PDB:1QAH PDBsum:1QAH
ProteinModelPortal:P52759 SMR:P52759 STRING:P52759
PhosphoSite:P52759 PRIDE:P52759 GeneID:65151 KEGG:rno:65151
UCSC:RGD:70940 InParanoid:P52759 EvolutionaryTrace:P52759
NextBio:613985 Genevestigator:P52759 GermOnline:ENSRNOG00000005437
Uniprot:P52759
Length = 137
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 67/125 (53%), Positives = 94/125 (75%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNI 120
S +++ + T+KAPAA+G YSQA+ + ++VSG +G+ P +G+ V + ++ +Q LKN+
Sbjct: 3 SIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNL 62
Query: 121 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 180
GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +R+E
Sbjct: 63 GEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIE 122
Query: 181 IECIA 185
IE IA
Sbjct: 123 IEAIA 127
>UNIPROTKB|Q3T114 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739
GO:GO:0005634 GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:BC102164 IPI:IPI00686803
RefSeq:NP_001029380.1 UniGene:Bt.1556 ProteinModelPortal:Q3T114
SMR:Q3T114 STRING:Q3T114 PRIDE:Q3T114 Ensembl:ENSBTAT00000016718
GeneID:504390 KEGG:bta:504390 CTD:10247 HOVERGEN:HBG003597
InParanoid:Q3T114 OrthoDB:EOG41JZDQ NextBio:20866637 Uniprot:Q3T114
Length = 137
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 67/125 (53%), Positives = 93/125 (74%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNI 120
S +++ + T KAPAA+GPYSQA+ + +++SG LG+ P +G+ V + ++ +Q L NI
Sbjct: 3 SLVRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNI 62
Query: 121 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 180
GEILKA+G D+++VVK T+LLAD+ DF TVN++Y +YF S PARA YQVAALP RVE
Sbjct: 63 GEILKAAGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSSFPARAAYQVAALPKGGRVE 122
Query: 181 IECIA 185
IE IA
Sbjct: 123 IEAIA 127
>UNIPROTKB|E1C7E1 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:AADN02024998 EMBL:AADN02024997
IPI:IPI00814279 ProteinModelPortal:E1C7E1
Ensembl:ENSGALT00000029404 Uniprot:E1C7E1
Length = 132
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 66/125 (52%), Positives = 94/125 (75%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNI 120
S +++ + T KAPA LG YSQA+ + ++++G +G+ P G+ VS I+++T+Q KN+
Sbjct: 3 SVVRKIISTAKAPAPLGAYSQAVLVDRTMYIAGQIGIEPSNGQLVSGGIKEETKQAFKNL 62
Query: 121 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 180
GEILKA+G DYS+VVKTT+ LAD+KDF +NEIY ++F S P+R ++QVAALP ARVE
Sbjct: 63 GEILKAAGCDYSNVVKTTVFLADIKDFNDMNEIYGQFFKSNCPSRVSFQVAALPKGARVE 122
Query: 181 IECIA 185
IE IA
Sbjct: 123 IEAIA 127
>UNIPROTKB|F1S0M2 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:CU234130 RefSeq:XP_001928988.1
UniGene:Ssc.8236 Ensembl:ENSSSCT00000006670 GeneID:100158002
KEGG:ssc:100158002 Uniprot:F1S0M2
Length = 137
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 65/123 (52%), Positives = 92/123 (74%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+++ + T KAPAA+GPYSQA+ + +++SG +G+ P +G+ V + ++ +Q L N+GE
Sbjct: 5 VRKVISTVKAPAAIGPYSQAVLVDRTIYISGQIGMDPASGQLVPGGVVEEAKQALTNMGE 64
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
ILKA+G D+++VVKTT+LLAD+ DF TVN+IY +YF PARA YQVAALP RVEIE
Sbjct: 65 ILKAAGCDFTNVVKTTVLLADINDFSTVNDIYKQYFQGNFPARAAYQVAALPKGGRVEIE 124
Query: 183 CIA 185
IA
Sbjct: 125 AIA 127
>TIGR_CMR|CHY_2460 [details] [associations]
symbol:CHY_2460 "endoribonuclease L-PSP family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004521 "endoribonuclease activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:VEMDGIM
RefSeq:YP_361254.1 ProteinModelPortal:Q3A9D0 SMR:Q3A9D0
STRING:Q3A9D0 GeneID:3726216 KEGG:chy:CHY_2460 PATRIC:21277985
BioCyc:CHYD246194:GJCN-2459-MONOMER Uniprot:Q3A9D0
Length = 125
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 62/123 (50%), Positives = 89/123 (72%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+KE + T+KAP A+GPYSQAIK N +FVSG +G+ P+TG+ V +E Q +Q ++NI +
Sbjct: 1 MKEVINTSKAPQAIGPYSQAIKVNGFLFVSGQIGINPQTGELVPGGVEAQIKQAMENIRQ 60
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
IL A+G ++S VVKTTI + ++ DF TVN+IY++YF PAR+ VA+LP A VE+E
Sbjct: 61 ILSAAGMEFSHVVKTTIFITNMDDFTTVNKIYSEYFGEVFPARSCIAVASLPKGALVEVE 120
Query: 183 CIA 185
+A
Sbjct: 121 VVA 123
>UNIPROTKB|H0YB34 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005634 GO:GO:0005737
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 HGNC:HGNC:16897 EMBL:AP003439
Ensembl:ENST00000520507 Uniprot:H0YB34
Length = 148
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 58/106 (54%), Positives = 82/106 (77%)
Query: 80 SQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTI 139
SQA+ + +++SG +G+ P +G+ VS + ++ +Q LKN+GEILKA+G D+++VVKTT+
Sbjct: 33 SQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTV 92
Query: 140 LLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 185
LLAD+ DF TVNEIY +YF S PARA YQVAALP +R+EIE +A
Sbjct: 93 LLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIEAVA 138
>ZFIN|ZDB-GENE-040718-315 [details] [associations]
symbol:hrsp12 "heat-responsive protein 12"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006056 Pfam:PF01042 ZFIN:ZDB-GENE-040718-315
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OMA:AGNTIYL CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:BX293540 EMBL:CR749175 EMBL:BC079492 IPI:IPI00501400
RefSeq:NP_001012315.1 UniGene:Dr.75381 SMR:Q6AXL2 STRING:Q6AXL2
Ensembl:ENSDART00000052097 GeneID:436849 KEGG:dre:436849
InParanoid:Q6AXL2 NextBio:20831280 Uniprot:Q6AXL2
Length = 135
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 60/125 (48%), Positives = 88/125 (70%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+++ + T APAA+GPYSQA+ + +++SG LG+ P +G+ + ++ QT+Q L NIGE
Sbjct: 5 IRKIIHTAAAPAAIGPYSQAVLVDRTMYISGQLGMDPASGQLAAG-VQAQTKQALINIGE 63
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
ILKA+G Y +VVK T+L+ D+ +F TVN++Y ++F S PARA YQV ALP VEIE
Sbjct: 64 ILKAAGCGYENVVKATVLMTDINEFNTVNDVYKQFFKSNFPARAAYQVVALPRGGLVEIE 123
Query: 183 CIAAL 187
+A L
Sbjct: 124 AVAVL 128
>UNIPROTKB|Q8U308 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:186497
"Pyrococcus furiosus DSM 3638" [GO:0019239 "deaminase activity"
evidence=IDA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE009950
GenomeReviews:AE009950_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_578397.1 HSSP:P39330 ProteinModelPortal:Q8U308 SMR:Q8U308
PRIDE:Q8U308 EnsemblBacteria:EBPYRT00000005430 GeneID:1468513
KEGG:pfu:PF0668 ProtClustDB:CLSK689587 Uniprot:Q8U308
Length = 126
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 59/123 (47%), Positives = 82/123 (66%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+KE + AP +GPYSQAIKA N +F++G + + P+TG+ V I+ QT QVL+NI
Sbjct: 1 MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKA 60
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
IL+A+G + VVK T+ L D+ DF +NE+YA+YF PARA +V+ LP D +EIE
Sbjct: 61 ILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIE 120
Query: 183 CIA 185
IA
Sbjct: 121 AIA 123
>TIGR_CMR|CPS_4974 [details] [associations]
symbol:CPS_4974 "putative endoribonuclease L-PSP"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K07567 RefSeq:YP_271613.1
ProteinModelPortal:Q47UB0 STRING:Q47UB0 GeneID:3521216
KEGG:cps:CPS_4974 PATRIC:21472741 OMA:ENHIYIS
BioCyc:CPSY167879:GI48-4975-MONOMER Uniprot:Q47UB0
Length = 129
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 58/127 (45%), Positives = 84/127 (66%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+K + T+KAP+A+GPYSQA+K NN V++SG + LV ET + +Q EQV KN+
Sbjct: 1 MKSIISTDKAPSAIGPYSQAVKVNNTVYLSGQIPLVAETMTVIEGGFAEQAEQVFKNLVA 60
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
+ +A+G D + +VK I L DL +F TVN+I ++YF P PARA QV+ LP D +EI+
Sbjct: 61 VCEAAGGDINDMVKVNIFLTDLSNFVTVNDIMSRYFSQPYPARAAIQVSKLPKDVDIEID 120
Query: 183 CIAALPN 189
+ LP+
Sbjct: 121 GVMELPS 127
>DICTYBASE|DDB_G0277761 [details] [associations]
symbol:DDB_G0277761 "endoribonuclease L-PSP"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006056
dictyBase:DDB_G0277761 Pfam:PF01042 EMBL:AAFI02000022
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
RefSeq:XP_642502.1 ProteinModelPortal:Q86KR5 STRING:Q86KR5
EnsemblProtists:DDB0169400 GeneID:8621213 KEGG:ddi:DDB_G0277761
InParanoid:Q86KR5 OMA:VEMDGIM ProtClustDB:CLSZ2452457
Uniprot:Q86KR5
Length = 129
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 64/123 (52%), Positives = 84/123 (68%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDT-IEDQTEQVLKNIGE 122
K V T AP A+GPYSQAI ANN VFVSG LG+ +T +F S+T + QT+ L N+
Sbjct: 4 KVVVKTTNAPGAIGPYSQAIIANNQVFVSGCLGIDKDTMQFTSETDVSIQTKLALTNMKN 63
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
I++A+G+ VVKTTILL + DF+ VN +Y+ +FP PAR+T+ VA LP +A VEIE
Sbjct: 64 IVEAAGSSMEKVVKTTILLKSMDDFQAVNTVYSTFFPVDPPARSTFAVACLPKNALVEIE 123
Query: 183 CIA 185
IA
Sbjct: 124 AIA 126
>ASPGD|ASPL0000065252 [details] [associations]
symbol:AN7040 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006056 Pfam:PF01042 EMBL:BN001304
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:AACD01000117 eggNOG:COG0251 InterPro:IPR006175
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OrthoDB:EOG43FM6K OMA:SIIHAER RefSeq:XP_664644.1
ProteinModelPortal:Q5AXE0 STRING:Q5AXE0
EnsemblFungi:CADANIAT00000432 GeneID:2870121 KEGG:ani:AN7040.2
Uniprot:Q5AXE0
Length = 134
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 56/119 (47%), Positives = 79/119 (66%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASG 128
TN APA SQA N+VF SG LG+ P+TGK V T++D+T Q++KN+ +L+ASG
Sbjct: 8 TNNAPAPAPFLSQATVVGNIVFCSGQLGIDPKTGKMVEGTVKDRTRQIIKNLSAVLEASG 67
Query: 129 ADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAAL 187
+ + V K + LAD+KDF+ +NE+Y + FP P PAR V LP+++ VEIEC A +
Sbjct: 68 SSLADVAKVNVFLADMKDFQDMNEVYMEGFPEPRPARTCVCVKTLPMNSDVEIECSAVV 126
>UNIPROTKB|P37552 [details] [associations]
symbol:yabJ "Enamine/imine deaminase" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0019239 "deaminase
activity" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005737 GO:GO:0009636 GO:GO:0016787 GO:GO:0019239
EMBL:AL009126 GenomeReviews:AL009126_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0009097 EMBL:D26185
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 PIR:S66077 RefSeq:NP_387929.1 PDB:1QD9
PDBsum:1QD9 ProteinModelPortal:P37552 SMR:P37552
EnsemblBacteria:EBBACT00000003065 GeneID:936988 KEGG:bsu:BSU00480
PATRIC:18971567 GenoList:BSU00480 KO:K07567 OMA:AGNTIYL
ProtClustDB:CLSK872604 BioCyc:BSUB:BSU00480-MONOMER
EvolutionaryTrace:P37552 Uniprot:P37552
Length = 125
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 58/123 (47%), Positives = 84/123 (68%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+ +AV T APAA+GPYSQ I NN+ + SG + L P +G+ V+ I++QT QV N+
Sbjct: 1 MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP-SGEMVNGDIKEQTHQVFSNLKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
+L+ +GA + +VVK T+ +AD++ F VNE+Y +YF + PAR+ +VA LP DA VEIE
Sbjct: 60 VLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIE 119
Query: 183 CIA 185
IA
Sbjct: 120 VIA 122
>TIGR_CMR|CJE_1579 [details] [associations]
symbol:CJE_1579 "endoribonuclease L-PSP, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:CP000025 GenomeReviews:CP000025_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215 OMA:PYNQAVV
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
RefSeq:YP_179562.1 ProteinModelPortal:Q5HT23 STRING:Q5HT23
GeneID:3232207 KEGG:cjr:CJE1579 PATRIC:20044950
ProtClustDB:CLSK879234 BioCyc:CJEJ195099:GJC0-1609-MONOMER
Uniprot:Q5HT23
Length = 120
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 58/113 (51%), Positives = 78/113 (69%)
Query: 73 PAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYS 132
P A+GPYS + N L+F+SG L + P++G+ S I++QT+Q LKNIG IL+ +G Y
Sbjct: 5 PKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENGISYD 64
Query: 133 SVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 185
VVKTT LAD+ DF NEIYA++F +P PAR+ + V LP A+VEIE IA
Sbjct: 65 KVVKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIA 117
>TIGR_CMR|BA_0046 [details] [associations]
symbol:BA_0046 "putative endoribonuclease L-PSP"
species:198094 "Bacillus anthracis str. Ames" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
OMA:AGNTIYL ProtClustDB:CLSK872604 HSSP:P37552 RefSeq:NP_842615.1
RefSeq:YP_016649.1 RefSeq:YP_026333.1 ProteinModelPortal:Q81VZ3
SMR:Q81VZ3 DNASU:1086283 EnsemblBacteria:EBBACT00000011279
EnsemblBacteria:EBBACT00000017967 EnsemblBacteria:EBBACT00000019901
GeneID:1086283 GeneID:2819036 GeneID:2848704 KEGG:ban:BA_0046
KEGG:bar:GBAA_0046 KEGG:bat:BAS0046
BioCyc:BANT260799:GJAJ-53-MONOMER BioCyc:BANT261594:GJ7F-55-MONOMER
Uniprot:Q81VZ3
Length = 124
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 58/121 (47%), Positives = 79/121 (65%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEIL 124
+ V TN AP A+GPYSQ I NN+ + SG + L +G+ V+ + QTEQV +N+ +L
Sbjct: 2 KVVQTNNAPQAIGPYSQGIIVNNMFYSSGQIPLTA-SGELVAGDVTVQTEQVFQNLQAVL 60
Query: 125 KASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 184
+ +GA + +VVKTT+ L D+ DF VNE+Y YF + PAR+ QVA LP D VEIE I
Sbjct: 61 EEAGASFDTVVKTTVFLKDMDDFNAVNEVYGSYFSAHKPARSCVQVAKLPKDVSVEIEVI 120
Query: 185 A 185
A
Sbjct: 121 A 121
>TIGR_CMR|GSU_2235 [details] [associations]
symbol:GSU_2235 "endoribonuclease L-PSP, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_953284.1 ProteinModelPortal:Q74AW4 GeneID:2687529
KEGG:gsu:GSU2235 PATRIC:22027325 ProtClustDB:CLSK924586
BioCyc:GSUL243231:GH27-2207-MONOMER Uniprot:Q74AW4
Length = 126
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 58/123 (47%), Positives = 79/123 (64%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+KE V T +AP A+GPYSQA++A +F+SG + L P TG+ V I QT +V+ N+
Sbjct: 1 MKEIVATEQAPKAIGPYSQAVRAGGFLFLSGQIPLDPATGEMVDGDITVQTMRVMDNMAA 60
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
+L +G + ++VKTTI LADL DF VN +Y F + PAR+T +V LP A VEIE
Sbjct: 61 VLAEAGLGFDAIVKTTIFLADLADFAAVNGVYGSRFAAAPPARSTVEVKGLPRGALVEIE 120
Query: 183 CIA 185
IA
Sbjct: 121 AIA 123
>TIGR_CMR|CBU_0304 [details] [associations]
symbol:CBU_0304 "endoribonuclease L-PSP, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
RefSeq:NP_819347.2 ProteinModelPortal:Q83EL5 PRIDE:Q83EL5
GeneID:1208186 KEGG:cbu:CBU_0304 PATRIC:17929303 OMA:MDGVMEI
ProtClustDB:CLSK913971 BioCyc:CBUR227377:GJ7S-311-MONOMER
Uniprot:Q83EL5
Length = 148
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 54/125 (43%), Positives = 78/125 (62%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+K+ + TNKAP A+G YSQA+KA N V+ SG + L PET + +S +D +V KNI
Sbjct: 22 MKQIIGTNKAPRAIGTYSQAVKAGNTVYFSGQIPLEPETMEIISGDFKDHVHRVFKNIAA 81
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
I +A+G + +VK TI L D+++F VNE+ Y+ P PARA V LP +A +EI+
Sbjct: 82 IAEAAGGSLAQIVKLTIYLTDMENFHLVNEVMKHYYEEPYPARAVIAVKQLPKNALIEID 141
Query: 183 CIAAL 187
+ L
Sbjct: 142 AVMVL 146
>SGD|S000000859 [details] [associations]
symbol:HMF1 "Member of the p14.5 protein family with
similarity to Mmf1p" species:4932 "Saccharomyces cerevisiae"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005758
"mitochondrial intermembrane space" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] InterPro:IPR006056 SGD:S000000859
Pfam:PF01042 GO:GO:0005829 GO:GO:0005634 GO:GO:0005758
EMBL:BK006939 EMBL:U18813 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
RefSeq:NP_010981.3 GeneID:856788 KEGG:sce:YER060W
RefSeq:NP_010978.3 GeneID:856785 KEGG:sce:YER057C EMBL:AB050475
EMBL:AY558456 PIR:S50560 PDB:1JD1 PDBsum:1JD1
ProteinModelPortal:P40037 SMR:P40037 DIP:DIP-4314N IntAct:P40037
MINT:MINT-555220 STRING:P40037 PaxDb:P40037 PeptideAtlas:P40037
EnsemblFungi:YER057C CYGD:YER057c GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 OMA:PYNQAVV OrthoDB:EOG483HF3
EvolutionaryTrace:P40037 NextBio:983003 Genevestigator:P40037
GermOnline:YER057C InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 Uniprot:P40037
Length = 129
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 56/120 (46%), Positives = 76/120 (63%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKA 126
V+ APAA YS A+K NNL+F+SG + + P+ K V +I D+ EQV++NI +L+A
Sbjct: 8 VICESAPAAAASYSHAMKVNNLIFLSGQIPVTPDN-KLVEGSIADKAEQVIQNIKNVLEA 66
Query: 127 SGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAA 186
S + VVK I LAD+ F N +YAKYF + PAR+ VAALPL +E+E IAA
Sbjct: 67 SNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNTHKPARSCVAVAALPLGVDMEMEAIAA 126
>TIGR_CMR|SO_0358 [details] [associations]
symbol:SO_0358 "endoribonuclease L-PSP, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
OMA:VEMDGIM HSSP:P44839 RefSeq:NP_715998.1
ProteinModelPortal:Q8EJU9 GeneID:1168235 KEGG:son:SO_0358
PATRIC:23520421 ProtClustDB:CLSK905712 Uniprot:Q8EJU9
Length = 127
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 55/124 (44%), Positives = 75/124 (60%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEI 123
K + T APAA+G YSQA+K N V++SG + LVP T + VSD E Q QV +N+ +
Sbjct: 4 KIIIATENAPAAIGTYSQAVKVGNTVYLSGQIPLVPSTMQIVSDDFEAQVVQVFENLTAV 63
Query: 124 LKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIEC 183
A+G + +VK I L DL F VNEI ++YF P PARA V LP D++VE++
Sbjct: 64 CTAAGGTINDIVKLNIFLTDLSHFAKVNEIMSRYFSQPYPARAAIGVKQLPKDSQVEMDG 123
Query: 184 IAAL 187
+ L
Sbjct: 124 VMEL 127
>FB|FBgn0086691 [details] [associations]
symbol:UK114 "UK114" species:7227 "Drosophila melanogaster"
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0006457 "protein folding" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0006457 EMBL:AE014134 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
OMA:PYNQAVV InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
EMBL:AY119558 RefSeq:NP_609747.1 UniGene:Dm.12046 HSSP:P80601
SMR:Q9V3W0 MINT:MINT-1007857 STRING:Q9V3W0
EnsemblMetazoa:FBtr0080746 EnsemblMetazoa:FBtr0332376 GeneID:34897
KEGG:dme:Dmel_CG15261 UCSC:CG15261-RA CTD:34897 FlyBase:FBgn0086691
InParanoid:Q9V3W0 OrthoDB:EOG4KSN27 GenomeRNAi:34897 NextBio:790777
Uniprot:Q9V3W0
Length = 138
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 53/123 (43%), Positives = 78/123 (63%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+++ + T A + PY+QA+ A+ V+VSG LGL +T K V +Q ++ L+N+
Sbjct: 5 VRKLISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEA 64
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
+LKA+ + V+K T+ L DL DF VNE+Y + F PAR+ +QVA LP+DA VEIE
Sbjct: 65 VLKAADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPARSCFQVAKLPMDALVEIE 124
Query: 183 CIA 185
CIA
Sbjct: 125 CIA 127
>ASPGD|ASPL0000015000 [details] [associations]
symbol:AN11062 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR006056
Pfam:PF01042 EMBL:BN001302 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 ProteinModelPortal:C8V7G7
EnsemblFungi:CADANIAT00004297 OMA:QAIKCNG Uniprot:C8V7G7
Length = 128
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 54/125 (43%), Positives = 76/125 (60%)
Query: 64 KEAVVTNKAPAAL-GPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
K V+T+KAP L G YSQAIK N +V+ SG + + ETGK + ++ T Q +KN+
Sbjct: 4 KTPVLTSKAPKPLPGIYSQAIKCNGMVYCSGAVAMDAETGKIIDGDVKAHTAQCIKNLSA 63
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
IL+ +G+D + VVK + LA++ DF +NE Y K++ P R V LPL+ VEIE
Sbjct: 64 ILEEAGSDITKVVKVNVFLANMDDFTAMNEEYMKHWGDVKPVRTCVAVKTLPLNTDVEIE 123
Query: 183 CIAAL 187
C A L
Sbjct: 124 CTAHL 128
>UNIPROTKB|P0AGL2 [details] [associations]
symbol:tdcF "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0042802 "identical
protein binding" evidence=IDA] [GO:0070689 "L-threonine catabolic
process to propionate" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006566 "threonine metabolic process"
evidence=IDA] InterPro:IPR006056 UniPathway:UPA00052 Pfam:PF01042
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016787
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 ProtClustDB:PRK11401 PIR:F65100 RefSeq:NP_417583.4
RefSeq:YP_491302.1 PDB:2UYJ PDB:2UYK PDB:2UYN PDB:2UYP PDBsum:2UYJ
PDBsum:2UYK PDBsum:2UYN PDBsum:2UYP ProteinModelPortal:P0AGL2
SMR:P0AGL2 DIP:DIP-48213N EnsemblBacteria:EBESCT00000001141
EnsemblBacteria:EBESCT00000014312 GeneID:12930270 GeneID:947624
KEGG:ecj:Y75_p3036 KEGG:eco:b3113 PATRIC:32121642 EchoBASE:EB2611
EcoGene:EG12757 BioCyc:EcoCyc:G7626-MONOMER
BioCyc:ECOL316407:JW5521-MONOMER EvolutionaryTrace:P0AGL2
Genevestigator:P0AGL2 Uniprot:P0AGL2
Length = 129
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 48/126 (38%), Positives = 79/126 (62%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+K+ + T +AP A+GPY Q + ++VF SG + + P+TG+ +D ++DQ L+N+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++
Sbjct: 60 IVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKL 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|P0AGL3 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:199310 "Escherichia coli CFT073" [GO:0006566 "threonine
metabolic process" evidence=ISS] InterPro:IPR006056
UniPathway:UPA00052 Pfam:PF01042 GO:GO:0016787 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 RefSeq:NP_755738.1 ProteinModelPortal:P0AGL3 SMR:P0AGL3
EnsemblBacteria:EBESCT00000041583 GeneID:1040096 KEGG:ecc:c3871
PATRIC:18285526 ProtClustDB:PRK11401 Uniprot:P0AGL3
Length = 129
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 48/126 (38%), Positives = 79/126 (62%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+K+ + T +AP A+GPY Q + ++VF SG + + P+TG+ +D ++DQ L+N+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++
Sbjct: 60 IVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKL 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|P0AGL4 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:623 "Shigella flexneri" [GO:0006566 "threonine metabolic
process" evidence=ISS] InterPro:IPR006056 UniPathway:UPA00052
Pfam:PF01042 EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
GO:GO:0006566 GO:GO:0070689 KO:K07567 ProtClustDB:PRK11401
RefSeq:NP_708917.2 RefSeq:NP_838627.1 ProteinModelPortal:P0AGL4
SMR:P0AGL4 EnsemblBacteria:EBESCT00000085096
EnsemblBacteria:EBESCT00000092667 GeneID:1027187 GeneID:1079601
KEGG:sfl:SF3153 KEGG:sfx:S3365 PATRIC:18708466 Uniprot:P0AGL4
Length = 129
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 48/126 (38%), Positives = 79/126 (62%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+K+ + T +AP A+GPY Q + ++VF SG + + P+TG+ +D ++DQ L+N+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++
Sbjct: 60 IVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKL 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|G4MY05 [details] [associations]
symbol:MGG_10440 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044271 "cellular nitrogen compound biosynthetic process"
evidence=IEP] InterPro:IPR006056 Pfam:PF01042 GO:GO:0044271
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:CM001232 InterPro:IPR006175 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 RefSeq:XP_003713340.1 ProteinModelPortal:G4MY05
EnsemblFungi:MGG_10440T0 GeneID:2682073 KEGG:mgr:MGG_10440
Uniprot:G4MY05
Length = 128
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 54/123 (43%), Positives = 75/123 (60%)
Query: 64 KEAVVTNKAPAAL-GPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
K AV+T+KAP L G YSQAIKAN VFVSG + + P + + + I+ T Q +KN+
Sbjct: 4 KTAVLTDKAPKPLPGIYSQAIKANGFVFVSGAVPMDPVSMQIIDGDIQAHTHQCIKNLTA 63
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
IL+ +G+ VVK + L+++ DF +NEIY +Y+ P R V LPL+ VEIE
Sbjct: 64 ILEEAGSSIEKVVKVNVFLSNMDDFAAMNEIYMQYWGEVKPCRTCVAVKTLPLNVDVEIE 123
Query: 183 CIA 185
C A
Sbjct: 124 CTA 126
>UNIPROTKB|H0YBX3 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005634 GO:GO:0005737
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 HGNC:HGNC:16897 EMBL:AP003439
Ensembl:ENST00000521560 Uniprot:H0YBX3
Length = 127
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 49/73 (67%), Positives = 60/73 (82%)
Query: 113 TEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAA 172
T Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S PARA YQVAA
Sbjct: 45 TLQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAA 104
Query: 173 LPLDARVEIECIA 185
LP +R+EIE +A
Sbjct: 105 LPKGSRIEIEAVA 117
>TIGR_CMR|SO_1404 [details] [associations]
symbol:SO_1404 "endoribonuclease L-PSP, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:SIIHAER
KO:K07567 RefSeq:NP_717024.2 HSSP:P40037 ProteinModelPortal:Q8EH27
GeneID:1169223 KEGG:son:SO_1404 PATRIC:23522460
ProtClustDB:CLSK906245 Uniprot:Q8EH27
Length = 127
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 49/123 (39%), Positives = 73/123 (59%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+K + +AP A+GPYS + NL+F SG L + + G V I +Q+ Q L+N+
Sbjct: 1 MKSIIHAERAPTAIGPYSHGTRYGNLIFTSGQLPVCKDKGGVVDGGISEQSVQCLENLKY 60
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 182
+L+A G +V+KTT L+++ DF NE+Y YF + PAR+ + V LPL +VEIE
Sbjct: 61 VLEAGGGSLDTVLKTTCYLSEISDFAAFNEVYKTYFKTDCPARSCFAVKDLPLGVKVEIE 120
Query: 183 CIA 185
IA
Sbjct: 121 AIA 123
>SGD|S000001313 [details] [associations]
symbol:MMF1 "Mitochondrial protein required for
transamination of isoleucine" species:4932 "Saccharomyces
cerevisiae" [GO:0032543 "mitochondrial translation" evidence=IGI]
[GO:0009097 "isoleucine biosynthetic process" evidence=IMP]
[GO:0005759 "mitochondrial matrix" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] InterPro:IPR006056 SGD:S000001313 Pfam:PF01042
GO:GO:0005759 EMBL:BK006942 GO:GO:0032543 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:Z38060 GO:GO:0009097
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:DQTRQCL
OrthoDB:EOG43FM6K EMBL:AB050474 EMBL:AY558301 PIR:S48428
RefSeq:NP_012213.3 RefSeq:NP_012219.3 PDB:3QUW PDBsum:3QUW
ProteinModelPortal:P40185 SMR:P40185 DIP:DIP-4714N IntAct:P40185
MINT:MINT-487056 STRING:P40185 SWISS-2DPAGE:P40185 PaxDb:P40185
PeptideAtlas:P40185 EnsemblFungi:YIL051C GeneID:854760
GeneID:854766 KEGG:sce:YIL045W KEGG:sce:YIL051C CYGD:YIL051c
NextBio:977502 Genevestigator:P40185 GermOnline:YIL051C
Uniprot:P40185
Length = 145
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 53/123 (43%), Positives = 76/123 (61%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKA 126
V T AP A YSQA+KANN V+VSG + P+ K V +I ++ EQV +N+ IL
Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDN-KPVQGSISEKAEQVFQNVKNILAE 82
Query: 127 SGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAA 186
S + ++VK + LAD+K+F N +YAK+F + PAR+ VA+LPL+ +E+E IA
Sbjct: 83 SNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAV 142
Query: 187 LPN 189
N
Sbjct: 143 EKN 145
>POMBASE|SPBC2G2.04c [details] [associations]
symbol:mmf1 "YjgF family protein Mmf1" species:4896
"Schizosaccharomyces pombe" [GO:0000002 "mitochondrial genome
maintenance" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR006056 PomBase:SPBC2G2.04c Pfam:PF01042 GO:GO:0005829
GO:GO:0005634 GO:GO:0005759 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0000002 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 PIR:T40143 RefSeq:NP_596433.1
ProteinModelPortal:O43003 STRING:O43003 PRIDE:O43003
EnsemblFungi:SPBC2G2.04c.1 GeneID:2540461 KEGG:spo:SPBC2G2.04c
OMA:DQTRQCL OrthoDB:EOG43FM6K NextBio:20801588 Uniprot:O43003
Length = 162
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 48/115 (41%), Positives = 72/115 (62%)
Query: 74 AALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSS 133
++ GPY+QAIKAN +++ SG + + GK + T+ DQT Q L N+ E+L +G+ +
Sbjct: 48 SSAGPYNQAIKANGVIYCSGQIPVA--NGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNK 105
Query: 134 VVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDA---RVEIECIA 185
+VK I LAD+ DF VN++Y + P P PAR+ V +PL ++EIECIA
Sbjct: 106 IVKVNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECIA 160
>POMBASE|SPAC1039.10 [details] [associations]
symbol:mmf2 "homologous Pmf1 factor 1, implicated in
isoleucine biosynthesis (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009097 "isoleucine biosynthetic process" evidence=ISO]
InterPro:IPR006056 Pfam:PF01042 PomBase:SPAC1039.10 GO:GO:0005739
GO:GO:0005634 GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
PIR:T50060 RefSeq:NP_595001.1 ProteinModelPortal:Q9UR06
STRING:Q9UR06 EnsemblFungi:SPAC1039.10.1 GeneID:2543017
KEGG:spo:SPAC1039.10 OMA:SIIHAER OrthoDB:EOG4FJCKC NextBio:20804048
Uniprot:Q9UR06
Length = 126
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 46/113 (40%), Positives = 70/113 (61%)
Query: 77 GPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVK 136
GPY+QA+K+ L+F SG + + G FV TI++QT ++N+ E+L+ +G+ +VK
Sbjct: 15 GPYNQAVKSGGLIFCSGQAAV--KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVK 72
Query: 137 TTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR---VEIECIAA 186
I L D+ DF +NE+Y + P P PAR T +PL ++ +EIECIAA
Sbjct: 73 VNIFLTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIAA 125
>UNIPROTKB|P0AF93 [details] [associations]
symbol:ridA "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0009097 "isoleucine biosynthetic process"
evidence=IEA] [GO:0009082 "branched-chain amino acid biosynthetic
process" evidence=IEA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019239 "deaminase activity" evidence=ISO;ISS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0005737 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0009636
GO:GO:0016787 GO:GO:0019239 EMBL:U14003 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
KO:K09022 RefSeq:NP_418664.2 RefSeq:YP_492383.1 PDB:1QU9
PDBsum:1QU9 ProteinModelPortal:P0AF93 SMR:P0AF93 DIP:DIP-36232N
SWISS-2DPAGE:P0AF93 PaxDb:P0AF93 PRIDE:P0AF93
EnsemblBacteria:EBESCT00000002907 EnsemblBacteria:EBESCT00000016129
GeneID:12933726 GeneID:948771 KEGG:ecj:Y75_p4128 KEGG:eco:b4243
PATRIC:32124063 EchoBASE:EB2415 EcoGene:EG12524
ProtClustDB:CLSK950280 BioCyc:EcoCyc:G7877-MONOMER
BioCyc:ECOL316407:JW5755-MONOMER EvolutionaryTrace:P0AF93
Genevestigator:P0AF93 Uniprot:P0AF93
Length = 128
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+ + + T APAA+GPY Q + N++ SG + + P+TG+ +D + Q Q L N+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|P0AF94 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:199310
"Escherichia coli CFT073" [GO:0019239 "deaminase activity"
evidence=ISS] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL RefSeq:NP_757189.1
ProteinModelPortal:P0AF94 SMR:P0AF94
EnsemblBacteria:EBESCT00000042525 GeneID:1037367 KEGG:ecc:c5342
PATRIC:18288330 KO:K09022 ProtClustDB:CLSK556760 Uniprot:P0AF94
Length = 128
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+ + + T APAA+GPY Q + N++ SG + + P+TG+ +D + Q Q L N+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|P0AF95 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:623 "Shigella
flexneri" [GO:0019239 "deaminase activity" evidence=ISS]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737 GO:GO:0009636
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 GO:GO:0019239
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K09022 ProtClustDB:CLSK556760
RefSeq:NP_709958.2 RefSeq:NP_839641.1 ProteinModelPortal:P0AF95
SMR:P0AF95 EnsemblBacteria:EBESCT00000085520
EnsemblBacteria:EBESCT00000090787 GeneID:1026589 GeneID:1080714
KEGG:sfl:SF4247 KEGG:sfx:S4509 PATRIC:18711038 Uniprot:P0AF95
Length = 128
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+ + + T APAA+GPY Q + N++ SG + + P+TG+ +D + Q Q L N+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|Q7CP78 [details] [associations]
symbol:ridA "Enamine/imine deaminase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0009097 "isoleucine biosynthetic process" evidence=IMP]
[GO:0019239 "deaminase activity" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0005737 GO:GO:0009636 EMBL:AE006468
GenomeReviews:AE006468_GR GO:GO:0016787 GO:GO:0019239
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022 EMBL:AF095578
RefSeq:NP_463318.1 ProteinModelPortal:Q7CP78 SMR:Q7CP78
PRIDE:Q7CP78 GeneID:1255984 KEGG:stm:STM4458 PATRIC:32387855
OMA:SQAVKIC ProtClustDB:CLSK894630 Uniprot:Q7CP78
Length = 128
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 49/126 (38%), Positives = 76/126 (60%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGE 122
+ + + T APAA+GPY Q + ++V SG + + P+TG V++ + Q Q L+N+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPKTGA-VAEDVSAQARQSLENVKA 59
Query: 123 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARV 179
I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
Query: 180 EIECIA 185
EIE IA
Sbjct: 120 EIEAIA 125
>UNIPROTKB|Q9KP64 [details] [associations]
symbol:VC_2512 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006056 Pfam:PF01042 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022
HSSP:P39330 PIR:B82067 RefSeq:NP_232141.1 ProteinModelPortal:Q9KP64
SMR:Q9KP64 DNASU:2615176 GeneID:2615176 KEGG:vch:VC2512
PATRIC:20084053 OMA:DEHNVAH ProtClustDB:CLSK874822 Uniprot:Q9KP64
Length = 129
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 50/121 (41%), Positives = 71/121 (58%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASG 128
T+ APAA+GPY Q + N+V SG + + P TG+ +D I Q Q L N+ +++ASG
Sbjct: 7 TDAAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEIPAD-IAAQARQSLDNVKAVVEASG 65
Query: 129 ADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA----PARATYQVAALPLDARVEIECI 184
+VK T+ + DL DF TVN++Y +F PAR+ +VA LP D +EIE I
Sbjct: 66 LTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVGIEIEAI 125
Query: 185 A 185
A
Sbjct: 126 A 126
>TIGR_CMR|VC_2512 [details] [associations]
symbol:VC_2512 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR006056
Pfam:PF01042 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022 HSSP:P39330
PIR:B82067 RefSeq:NP_232141.1 ProteinModelPortal:Q9KP64 SMR:Q9KP64
DNASU:2615176 GeneID:2615176 KEGG:vch:VC2512 PATRIC:20084053
OMA:DEHNVAH ProtClustDB:CLSK874822 Uniprot:Q9KP64
Length = 129
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 50/121 (41%), Positives = 71/121 (58%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASG 128
T+ APAA+GPY Q + N+V SG + + P TG+ +D I Q Q L N+ +++ASG
Sbjct: 7 TDAAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEIPAD-IAAQARQSLDNVKAVVEASG 65
Query: 129 ADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA----PARATYQVAALPLDARVEIECI 184
+VK T+ + DL DF TVN++Y +F PAR+ +VA LP D +EIE I
Sbjct: 66 LTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVGIEIEAI 125
Query: 185 A 185
A
Sbjct: 126 A 126
>TIGR_CMR|DET_1052 [details] [associations]
symbol:DET_1052 "endoribonuclease L-PSP, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:QAIKCNG
RefSeq:YP_181767.1 ProteinModelPortal:Q3Z7N2 STRING:Q3Z7N2
GeneID:3229647 KEGG:det:DET1052 PATRIC:21609149
ProtClustDB:CLSK837122 BioCyc:DETH243164:GJNF-1053-MONOMER
Uniprot:Q3Z7N2
Length = 125
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 46/117 (39%), Positives = 73/117 (62%)
Query: 72 APAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADY 131
AP A GPYS A++A + +++SG +G GK ++ +E QT++ L+ + E+LK +GA +
Sbjct: 8 APGAQGPYSLAVRAGDYLYISGQIGHTDIEGKPLAG-VEAQTKRCLEKMAELLKEAGASF 66
Query: 132 SSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALP 188
VVKTT+ L +DF +N +Y +F +P PAR+T + + VEIE +A LP
Sbjct: 67 DDVVKTTVFLKSQEDFAKMNSVYTTFFSAPKPARSTVIAGMVFPEIVVEIEAVAYLP 123
>ASPGD|ASPL0000035043 [details] [associations]
symbol:AN9080 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006056 Pfam:PF01042
EMBL:BN001306 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:SQAVKIC ProteinModelPortal:C8VH67
EnsemblFungi:CADANIAT00009535 Uniprot:C8VH67
Length = 161
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 56/167 (33%), Positives = 82/167 (49%)
Query: 19 LRTRSRLAAVGIGCASVAGSSVWRSSCKKHSTPFACLSTSAVSNLKEAVVTNKAPAALGP 78
LR RL V S+ S+ + PF T+A+S+L N P +GP
Sbjct: 2 LRASFRLVTVS---HSLLSPSIRPRISPRVRLPF---QTAAMSDLTNIFTPNACPP-VGP 54
Query: 79 YSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTT 138
YSQA+KAN +F+SG + + G V I +T+ NI IL A+G+ +++
Sbjct: 55 YSQAVKANGQIFLSGQIP-ADKNGNLVEGDIRTKTQACCDNIKAILDAAGSSVDKIIRVN 113
Query: 139 ILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 185
+ L D+ +F +N Y K+F + PAR+ LP VEIECIA
Sbjct: 114 VFLDDMSNFAEMNAQYEKFF-THKPARSCIAAKQLPKGVPVEIECIA 159
>UNIPROTKB|G4N2M8 [details] [associations]
symbol:MGG_07621 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044271 "cellular nitrogen compound biosynthetic process"
evidence=IEP] Pfam:PF01042 EMBL:CM001233 GO:GO:0044271
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 RefSeq:XP_003711544.1
ProteinModelPortal:G4N2M8 EnsemblFungi:MGG_07621T0 GeneID:2683541
KEGG:mgr:MGG_07621 Uniprot:G4N2M8
Length = 147
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 40/114 (35%), Positives = 61/114 (53%)
Query: 77 GPY-SQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVV 135
GP S + +LV+ SG P + + I QT V+ NI +LK +G + +
Sbjct: 36 GPILSGGVMTRDLVYTSGT---TPSINGTIPEGISAQTANVINNIAAVLKEAGTSWEYAL 92
Query: 136 KTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALPN 189
KTT+ LA++ D+ +N +Y + P+P PAR T Q LP + VEIE + A P+
Sbjct: 93 KTTVFLANMDDYAAMNAVYGELLPNPKPARTTIQAGKLPGNFLVEIEAVVARPH 146
>ASPGD|ASPL0000028527 [details] [associations]
symbol:AN5543 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01042 EMBL:BN001305 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 EMBL:AACD01000095 HOGENOM:HOG000267215
PANTHER:PTHR11803 OrthoDB:EOG4FJCKC RefSeq:XP_663147.1
ProteinModelPortal:Q5B1N7 EnsemblFungi:CADANIAT00003539
GeneID:2871833 KEGG:ani:AN5543.2 OMA:EIECIAQ Uniprot:Q5B1N7
Length = 116
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 41/93 (44%), Positives = 57/93 (61%)
Query: 94 VLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEI 153
V GLV G+ + I+ T VL+NI E+L+ SG+ VVK + LAD+KDF +NE+
Sbjct: 23 VPGLVFLAGQTATGEIKQATRTVLQNIKEVLELSGSSLEQVVKYNVYLADMKDFAAMNEV 82
Query: 154 YAKYFPSPAPARATYQVAALPLDARV-EIECIA 185
Y ++ P P P+R+ Q A P + V EIECIA
Sbjct: 83 YIEFLPKPMPSRSCLQ-ALPPGEGTVIEIECIA 114
>UNIPROTKB|P0AFQ5 [details] [associations]
symbol:rutC "predicted aminoacrylate peracid reductase"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006212 "uracil
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=IMP] [GO:0019740 "nitrogen utilization"
evidence=IMP] HAMAP:MF_00831 Pfam:PF01042 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016491
GO:GO:0019740 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006212 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 PIR:H64842 RefSeq:NP_415530.1 RefSeq:YP_489283.1
ProteinModelPortal:P0AFQ5 SMR:P0AFQ5 IntAct:P0AFQ5
EnsemblBacteria:EBESCT00000002580 EnsemblBacteria:EBESCT00000015649
GeneID:12931042 GeneID:945599 KEGG:ecj:Y75_p0983 KEGG:eco:b1010
PATRIC:32117249 EchoBASE:EB3617 EcoGene:EG13857 KO:K09021
OMA:TIITPPG ProtClustDB:CLSK879923 BioCyc:EcoCyc:G6521-MONOMER
BioCyc:ECOL316407:JW0995-MONOMER Genevestigator:P0AFQ5
InterPro:IPR019898 TIGRFAMs:TIGR03610 Uniprot:P0AFQ5
Length = 128
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEI 123
K ++ + A L P+ A+ +V+VSG L +D + QT VL+ I ++
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKV 62
Query: 124 LKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIEC 183
++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA VEI
Sbjct: 63 IETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIAT 122
Query: 184 IA 185
IA
Sbjct: 123 IA 124
>UNIPROTKB|Q0BZ17 [details] [associations]
symbol:HNE_2586 "Amidohydrolase family/endoribonuclease
L-PSP" species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011059 Pfam:PF01042 SUPFAM:SSF51338
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0016810
eggNOG:COG0251 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:YP_761276.1 ProteinModelPortal:Q0BZ17 STRING:Q0BZ17
GeneID:4288554 KEGG:hne:HNE_2586 PATRIC:32218029
HOGENOM:HOG000288353 OMA:VEVECMA ProtClustDB:CLSK839674
BioCyc:HNEP228405:GI69-2604-MONOMER Uniprot:Q0BZ17
Length = 755
Score = 183 (69.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 37/113 (32%), Positives = 65/113 (57%)
Query: 78 PYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKT 137
P+S A++ N++++SG +G E G+ S D +V+ ++ ++ ++GAD + K
Sbjct: 645 PFSGAVRVGNIIYLSGQIGGA-EGGR--SSDFRDHAVEVMDSVRQVAASAGADMDQIFKC 701
Query: 138 TILLADLKDFKTVNEIYAKYFPSPA-PARATYQVAALPLDARVEIECIAALPN 189
T++L D+ ++ NE+YA YF PAR+ + L L A VE+EC+A N
Sbjct: 702 TVMLEDMSNWPAFNEVYAGYFTKGRMPARSAFGADGLALGASVEVECMAYAEN 754
>TIGR_CMR|SPO_2709 [details] [associations]
symbol:SPO_2709 "endoribonuclease L-PSP, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 RefSeq:YP_167919.1 ProteinModelPortal:Q5LPY7
GeneID:3194321 KEGG:sil:SPO2709 PATRIC:23378833 OMA:IMVEIEA
Uniprot:Q5LPY7
Length = 134
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 80 SQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTI 139
S+AI+A + VF++G + + + + ++E+QT VL +I L +G VVK +
Sbjct: 23 SRAIRAGDFVFLTGQIPM-RDGVPITTGSVEEQTRAVLDDITATLALAGCTRDDVVKAMV 81
Query: 140 LLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALP 188
L DF N +Y +YFP P R+ V+ L +D RVE+E +A P
Sbjct: 82 WLRARSDFPGFNAVYGEYFPHDPPTRSAV-VSDLLVDVRVEVEVMAYKP 129
>UNIPROTKB|G4N4Y7 [details] [associations]
symbol:MGG_16750 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:CM001233 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:XP_003711906.1 ProteinModelPortal:G4N4Y7
EnsemblFungi:MGG_16750T0 GeneID:12984246 KEGG:mgr:MGG_16750
Uniprot:G4N4Y7
Length = 137
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 70 NKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGA 129
+K + +G YS+A+ + + VFVSG G TG+ + + Q EQ +NI L +GA
Sbjct: 11 SKFESQIG-YSRAVVSGDWVFVSGCTGYDYSTGEIAAGDVAAQAEQTFRNIASALGEAGA 69
Query: 130 DYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALPN 189
VV+ +L + DF + ++ ++ PA Q + VEIE A +
Sbjct: 70 GMRDVVRVRYILPNRTDFPKIWDVTKRWLGDVRPAATMVQAGLMEEAMLVEIEVTARIGG 129
Query: 190 A 190
A
Sbjct: 130 A 130
>UNIPROTKB|P0AEB7 [details] [associations]
symbol:yoaB "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0042710 "biofilm formation" evidence=IMP]
Pfam:PF01042 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 PIR:A64942 RefSeq:NP_416323.4
RefSeq:YP_490070.1 ProteinModelPortal:P0AEB7 SMR:P0AEB7
DIP:DIP-47897N EnsemblBacteria:EBESCT00000002696
EnsemblBacteria:EBESCT00000018006 GeneID:12931348 GeneID:946357
KEGG:ecj:Y75_p1784 KEGG:eco:b1809 PATRIC:32118935 EchoBASE:EB3287
EcoGene:EG13514 HOGENOM:HOG000267214 OMA:DVTIFLA
ProtClustDB:CLSK880215 BioCyc:EcoCyc:G6993-MONOMER
BioCyc:ECOL316407:JW5295-MONOMER Genevestigator:P0AEB7
Uniprot:P0AEB7
Length = 114
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 79 YSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTT 138
+S + NN ++ +GV PE +D E QT L I +L+ G++ SS++ T
Sbjct: 12 WSDVVIHNNTLYYTGV----PEN--LDADAFE-QTANTLAQIDAVLEKQGSNKSSILDAT 64
Query: 139 ILLADLKDFKTVNEIY-AKYFPSPAPARATYQVAALPLDARVEIECIAAL 187
I LAD DF +N+ + A AP R T Q + +VEI+ +AA+
Sbjct: 65 IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV 114
>TIGR_CMR|CPS_2046 [details] [associations]
symbol:CPS_2046 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:YP_268774.1 ProteinModelPortal:Q483J2 STRING:Q483J2
GeneID:3518721 KEGG:cps:CPS_2046 PATRIC:21467215 OMA:EWLVEID
ProtClustDB:CLSK869315 BioCyc:CPSY167879:GI48-2116-MONOMER
Uniprot:Q483J2
Length = 136
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 81 QAIKANNLVFVSGVLGLVPETGKFVS--DTIEDQTEQVLKNIGEILKASGADYSSVVKTT 138
QA+KA N ++V G +G G V D E Q +Q +KN+ ++L+ +G++ S VVKTT
Sbjct: 27 QAVKAGNTIYVRGQIG-TDFNGNLVGLGDPGE-QAKQAMKNVKQLLEEAGSELSHVVKTT 84
Query: 139 ILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPL-DARVEIECIAALP 188
+ D + + V + K+F P ++ L + +EI+ IA +P
Sbjct: 85 TYITDPRYREPVYQEVGKWFKGVYPISTGLVISGLAQPEWLMEIDVIAVIP 135
>TIGR_CMR|SPO_2000 [details] [associations]
symbol:SPO_2000 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 RefSeq:YP_167234.1 ProteinModelPortal:Q5LRX1
GeneID:3193577 KEGG:sil:SPO2000 PATRIC:23377331 OMA:KILMANI
ProtClustDB:CLSK751568 Uniprot:Q5LRX1
Length = 117
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 80 SQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTI 139
SQ + + V+++G +G ++ QT+ L I +L +G+D + +++TTI
Sbjct: 14 SQIVIHGDTVYLAGQVGTA-------GASVAQQTQDCLNQIDALLSEAGSDRTRILQTTI 66
Query: 140 LLADLKDFKTVNEIYAKYFPSP-APARATYQVAALPLDARVEIECIAA 186
LAD+ DF +N ++ + P+ APARA + D RVE AA
Sbjct: 67 WLADMADFAEMNAVWDSWVPAGHAPARACGEARLATPDYRVEFIVTAA 114
>TIGR_CMR|BA_2691 [details] [associations]
symbol:BA_2691 "endoribonuclease L-PSP, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:NP_845048.1 RefSeq:YP_019332.1 RefSeq:YP_028766.1
HSSP:P37552 ProteinModelPortal:Q81PV3 DNASU:1087345
EnsemblBacteria:EBBACT00000009055 EnsemblBacteria:EBBACT00000016755
EnsemblBacteria:EBBACT00000019538 GeneID:1087345 GeneID:2816679
GeneID:2850597 KEGG:ban:BA_2691 KEGG:bar:GBAA_2691 KEGG:bat:BAS2506
OMA:INIDGQI ProtClustDB:CLSK903098
BioCyc:BANT260799:GJAJ-2571-MONOMER
BioCyc:BANT261594:GJ7F-2665-MONOMER Uniprot:Q81PV3
Length = 131
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNL---VFVSGVLGLVPETGKFVS-DTIEDQTEQVLKN 119
K+ + P G YS ++A+N +++SG + + + G+ V + + QT QV +N
Sbjct: 3 KKFINPKTMPPTFG-YSHVVEASNAKRTIYISGQVAINTD-GQIVGINDLATQTRQVFEN 60
Query: 120 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP-APARATYQVAALPLD-A 177
I L+ S +++ VVK T L D+ V +I +Y + PA + +V L D
Sbjct: 61 IKIALETSDLNFNDVVKLTFFLTDISQMAIVRDIRDQYIDTNNPPASSAVEVRKLINDNL 120
Query: 178 RVEIECIA 185
+EIE IA
Sbjct: 121 LIEIEAIA 128
>ASPGD|ASPL0000065512 [details] [associations]
symbol:AN7059 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01042 EMBL:BN001304 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
EMBL:AACD01000118 RefSeq:XP_664663.1 ProteinModelPortal:Q5AXC1
EnsemblFungi:CADANIAT00000412 GeneID:2869939 KEGG:ani:AN7059.2
OMA:MRVEIRV OrthoDB:EOG49CTJ9 Uniprot:Q5AXC1
Length = 135
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 79 YSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILK-ASGADYSSVVKT 137
Y+QA++ + + +SG G PET + SD + +TEQ N+ LK A G +S V +
Sbjct: 22 YNQAVRIGDRIEISGQGGWDPETLQVHSD-LSRETEQAFANVDLALKDAGGKGWSQVYRV 80
Query: 138 TILLADLKDFKTVN---EIYAKYFPSPAPARATYQVAALPLDA-RVEIECIA 185
I ++K+ + E K+ P P V+ L L+ RVEIE IA
Sbjct: 81 RIFTTEIKNEQATGFLVENLRKWMPDHKPVLTCVGVSELALEGMRVEIEAIA 132
>UNIPROTKB|Q8EJW9 [details] [associations]
symbol:SO_0337 "YER057c/Yigf/Uk114 family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 HOGENOM:HOG000267214
OMA:CGQVCKD HSSP:P37552 RefSeq:NP_715977.1
ProteinModelPortal:Q8EJW9 GeneID:1168214 KEGG:son:SO_0337
PATRIC:23520377 ProtClustDB:CLSK905703 Uniprot:Q8EJW9
Length = 118
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 84 KANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLAD 143
+ +++V G + L + K I +QT +L+ + +L +G+ ++ T+ L D
Sbjct: 11 RMSSIVIHQGTVYLCGQVAKDKYQNITEQTTTMLEEVDALLAQAGSSREHLLSATLYLKD 70
Query: 144 LKDFKTVNEIYAKYFPSP-APARATYQVAALPLDARVEIECIAALPNA 190
+ D+ +N ++ + P APARA Q A + VE+ IAA+ A
Sbjct: 71 MNDYDAMNAVWDAWVPKGHAPARACVQAAIAEPEYLVEVSVIAAVAKA 118
>TIGR_CMR|SO_0337 [details] [associations]
symbol:SO_0337 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01042 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 HOGENOM:HOG000267214
OMA:CGQVCKD HSSP:P37552 RefSeq:NP_715977.1
ProteinModelPortal:Q8EJW9 GeneID:1168214 KEGG:son:SO_0337
PATRIC:23520377 ProtClustDB:CLSK905703 Uniprot:Q8EJW9
Length = 118
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 84 KANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLAD 143
+ +++V G + L + K I +QT +L+ + +L +G+ ++ T+ L D
Sbjct: 11 RMSSIVIHQGTVYLCGQVAKDKYQNITEQTTTMLEEVDALLAQAGSSREHLLSATLYLKD 70
Query: 144 LKDFKTVNEIYAKYFPSP-APARATYQVAALPLDARVEIECIAALPNA 190
+ D+ +N ++ + P APARA Q A + VE+ IAA+ A
Sbjct: 71 MNDYDAMNAVWDAWVPKGHAPARACVQAAIAEPEYLVEVSVIAAVAKA 118
>TIGR_CMR|CPS_3858 [details] [associations]
symbol:CPS_3858 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:YP_270520.1 ProteinModelPortal:Q47XF0 STRING:Q47XF0
GeneID:3522803 KEGG:cps:CPS_3858 PATRIC:21470621 OMA:PYPNRAA
ProtClustDB:CLSK909028 BioCyc:CPSY167879:GI48-3875-MONOMER
Uniprot:Q47XF0
Length = 125
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 74 AALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSS 133
A+ P AI ANN + + + + G+ V IE Q Q ++N ++A+
Sbjct: 11 ASKAPLEWAIIANNTLSTAQIP--INAEGQVVEGGIEAQARQTMENFKHTIEAANLTMDD 68
Query: 134 VVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV-EIECIAALP 188
V + I + N++YA+YF +P P RA VA L + + E+ AA+P
Sbjct: 69 VTQVLIYVTARDQLPVFNKVYAEYFQAPYPNRAAMIVAGLAREEMLCEVVAYAAVP 124
>ASPGD|ASPL0000036888 [details] [associations]
symbol:AN9123 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01042 EMBL:BN001306 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR006175
PANTHER:PTHR11803 ProteinModelPortal:C8VK78
EnsemblFungi:CADANIAT00009487 OMA:TIPRDIN Uniprot:C8VK78
Length = 143
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 70 NKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGA 129
+KA YSQA++ N + +SG G +T + +S ++ QT+Q NI IL A+G
Sbjct: 14 DKASFNFHAYSQAVRVGNTIHLSGQGGWDTQT-QAISSSVPRQTDQAFANIDAILHAAGG 72
Query: 130 D-YSSV--VKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDA-RVEIECIA 185
+S V V++ L D + ++ + K+ P P QV L D +VEIE A
Sbjct: 73 KGWSQVYKVRSYHLALDAEAQDSMARNFDKWIPEHKPLWTCVQVGRLAGDGMKVEIEVEA 132
Query: 186 ALP 188
+P
Sbjct: 133 HVP 135
>UNIPROTKB|O07205 [details] [associations]
symbol:MT2777.1 "Conserved protein" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] Pfam:PF01042 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
EMBL:AL123456 PIR:C70531 RefSeq:NP_217220.1 RefSeq:NP_337279.1
RefSeq:YP_006516148.1 PDB:3I7T PDBsum:3I7T SMR:O07205
EnsemblBacteria:EBMYCT00000003108 EnsemblBacteria:EBMYCT00000070986
GeneID:13319431 GeneID:887675 GeneID:925520 KEGG:mtc:MT2777.1
KEGG:mtu:Rv2704 KEGG:mtv:RVBD_2704 PATRIC:18127850
TubercuList:Rv2704 OMA:WCFVSGT ProtClustDB:CLSK792018
EvolutionaryTrace:O07205 Uniprot:O07205
Length = 142
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 74 AALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSS 133
+A+G YS+A++ LV V+G G +G D I QT L+ I L +GA +
Sbjct: 16 SAVG-YSRAVRIGPLVVVAGTTG----SG----DDIAAQTRDALRRIEIALGQAGATLAD 66
Query: 134 VVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR-VEIECIAALPNA 190
VV+T I + D+ ++ V E++A+ F P + +V AL VEIE A + +A
Sbjct: 67 VVRTRIYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSA 124
>TIGR_CMR|SPO_2949 [details] [associations]
symbol:SPO_2949 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 OMA:CGQVCKD RefSeq:YP_168157.1
ProteinModelPortal:Q5LP99 GeneID:3195985 KEGG:sil:SPO2949
PATRIC:23379331 Uniprot:Q5LP99
Length = 114
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/109 (30%), Positives = 60/109 (55%)
Query: 80 SQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTI 139
S+ +K N + ++ G +G +G D++ +QT L + +L +G+D + +++ +
Sbjct: 13 SKIVKHNGVAYLCGQVG----SG----DSVAEQTRDCLARVDALLAEAGSDNTRILQAIV 64
Query: 140 LLADLKDFKTVNEIYAKYFPSP-APARATYQVAALPLDA-RVEIECIAA 186
LAD+ DF +N ++ + P+ APARA + A L D +VEI AA
Sbjct: 65 WLADMADFAEMNAVWDAWVPAGHAPARACGE-AKLARDTLKVEIIVTAA 112
>UNIPROTKB|Q9KRT0 [details] [associations]
symbol:VC1556 "Putative uncharacterized protein VC1556"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01042 GenomeReviews:AE003852_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 EMBL:AE004233 PIR:F82185
RefSeq:NP_231196.1 ProteinModelPortal:Q9KRT0 DNASU:2613935
GeneID:2613935 KEGG:vch:VC1556 PATRIC:20082173 OMA:LVEIAFV
ProtClustDB:CLSK874428 Uniprot:Q9KRT0
Length = 120
Score = 115 (45.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 86 NNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLK 145
+++ +G+ V S ++ Q EQVL L G+D S ++ TI + D
Sbjct: 13 SDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFA 72
Query: 146 DFKTVNEIYAKYFPSP-APARATYQVAALPLDARVEIECIAA 186
D +N+I+ +FP AP+RA + D +VE+ +AA
Sbjct: 73 DLPVLNQIWDAWFPEGCAPSRACVKAELADPDYKVEMAFVAA 114
>TIGR_CMR|VC_1556 [details] [associations]
symbol:VC_1556 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF01042
GenomeReviews:AE003852_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803 EMBL:AE004233
PIR:F82185 RefSeq:NP_231196.1 ProteinModelPortal:Q9KRT0
DNASU:2613935 GeneID:2613935 KEGG:vch:VC1556 PATRIC:20082173
OMA:LVEIAFV ProtClustDB:CLSK874428 Uniprot:Q9KRT0
Length = 120
Score = 115 (45.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 86 NNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLK 145
+++ +G+ V S ++ Q EQVL L G+D S ++ TI + D
Sbjct: 13 SDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFA 72
Query: 146 DFKTVNEIYAKYFPSP-APARATYQVAALPLDARVEIECIAA 186
D +N+I+ +FP AP+RA + D +VE+ +AA
Sbjct: 73 DLPVLNQIWDAWFPEGCAPSRACVKAELADPDYKVEMAFVAA 114
>TIGR_CMR|SPO_1005 [details] [associations]
symbol:SPO_1005 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 OMA:WCFVSGT RefSeq:YP_166257.1
ProteinModelPortal:Q5LUP8 GeneID:3194692 KEGG:sil:SPO1005
PATRIC:23375303 ProtClustDB:CLSK759102 Uniprot:Q5LUP8
Length = 171
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 74 AALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSS 133
A +G Y +A+ A V V+G +G G+ D + Q L+ IG LK +GA ++
Sbjct: 65 AKIG-YCRAVVAGGFVHVAGTVG----QGE---DVVA-QCRSALEVIGAALKEAGAGFAD 115
Query: 134 VVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALP 188
VV+ T L D +F+ I A+ F + PA + + R+EIE A LP
Sbjct: 116 VVRVTYYLPDAAEFEPCWPILAETFGANPPAATMIECGLIDPKYRIEIEVTALLP 170
>POMBASE|SPBC577.12 [details] [associations]
symbol:mug71 "diphthamide synthetase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0017178 "diphthine-ammonia ligase activity" evidence=ISO]
[GO:0017183 "peptidyl-diphthamide biosynthetic process from
peptidyl-histidine" evidence=ISO] UniPathway:UPA00559
PomBase:SPBC577.12 Pfam:PF01042 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0004521 Gene3D:3.40.50.620 InterPro:IPR014729
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 HSSP:O58996
PIR:T40556 RefSeq:NP_595310.1 ProteinModelPortal:Q9USQ7
EnsemblFungi:SPBC577.12.1 GeneID:2540717 KEGG:spo:SPBC577.12
eggNOG:COG0251 HOGENOM:HOG000247962 KO:K06927 OMA:GGEFETI
OrthoDB:EOG4ZSDBS NextBio:20801839 InterPro:IPR006175
PROSITE:PS01094 Uniprot:Q9USQ7
Length = 606
Score = 126 (49.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 72 APAALGPYSQAIKANNLVFVSGVLGLVPETGKF-VSDTIEDQTEQVLKNIGEILKASGAD 130
APA +GPYSQ+I AN +VF+SG +GL+P + + D I + L++ + KA
Sbjct: 417 APANIGPYSQSICANGVVFISGQIGLIPSVMELKLHDKIFEMV-LALQHANRVAKAMRV- 474
Query: 131 YSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQ--VAALPLDARVE 180
S++ + D +D V +I+++Y + + V ALP +A VE
Sbjct: 475 -GSLIACLAYVCDSRDADCVVKIWSEYTKNTGESSPVLVALVDALPRNASVE 525
Score = 110 (43.8 bits), Expect = 0.00089, P = 0.00089
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 94 VLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEI 153
VLG V T K +T + + E + N+ E+L G +V T++L+ + F N +
Sbjct: 309 VLGNVVAT-KGSYNTFQGEAESAINNLNELLGTYGYSNKNVYFVTVILSSMSKFAEFNSV 367
Query: 154 YAKYFPSPAPARATYQVAALPLDARVEIECI 184
Y KYF P + A L + R+ + CI
Sbjct: 368 YNKYFDFTNPPSRSCVAAPLASEYRIVMSCI 398
>UNIPROTKB|G4N4I7 [details] [associations]
symbol:MGG_05968 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF01042
EMBL:CM001233 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:XP_003711809.1 ProteinModelPortal:G4N4I7
EnsemblFungi:MGG_05968T0 GeneID:2684007 KEGG:mgr:MGG_05968
Uniprot:G4N4I7
Length = 136
Score = 101 (40.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 79 YSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILK-ASGADYSSVVKT 137
YSQ+++ N + SG G +TGK +S+ E++ +Q N+ LK A G V K
Sbjct: 22 YSQSVRLGNEIKTSGQGGWDTQTGK-ISEKYEEELDQAFDNLDVALKDAGGKGLEQVYKV 80
Query: 138 TILLA-DLKD--FKTVNEIYAKYFPSPAPARATYQVAALPL-DARVEIECIAALP 188
+ L ++ + F + K FP+ P V L + VEIE A P
Sbjct: 81 NMYLTIEMTEEVFGQTAAVLKKRFPNHRPLLTVVGVTTLAFPEMHVEIEVSAYDP 135
>TIGR_CMR|CPS_4240 [details] [associations]
symbol:CPS_4240 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 HOGENOM:HOG000267214 RefSeq:YP_270890.1
ProteinModelPortal:Q47WD2 STRING:Q47WD2 GeneID:3522251
KEGG:cps:CPS_4240 PATRIC:21471345 OMA:CGQVCKD
BioCyc:CPSY167879:GI48-4250-MONOMER Uniprot:Q47WD2
Length = 115
Score = 97 (39.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 84 KANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLAD 143
+ + +V G + L + + I +QT+ +L + +L +G+D ++ TI + D
Sbjct: 10 RMSRIVKHHGTIYLCGQVAADATKDITEQTQTMLDKVDALLIQAGSDRKHILSATIYVKD 69
Query: 144 LKDFKTVNEIYAKYFPSP-APARATYQVAALPLDAR-VEIECIAA 186
+ F +N ++ + P APARA A + +A VEI +AA
Sbjct: 70 MSYFADMNAVWDAWVPEGYAPARACV-AAKMAREALLVEISVVAA 113
>TIGR_CMR|CPS_3498 [details] [associations]
symbol:CPS_3498 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000083
GenomeReviews:CP000083_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175
HOGENOM:HOG000267215 PANTHER:PTHR11803 RefSeq:YP_270172.1
ProteinModelPortal:Q47YE8 STRING:Q47YE8 GeneID:3519108
KEGG:cps:CPS_3498 PATRIC:21469935 OMA:HANAVIE
BioCyc:CPSY167879:GI48-3526-MONOMER Uniprot:Q47YE8
Length = 154
Score = 105 (42.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 83 IKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLA 142
I+++ +++VSG +G +TG S+ Q ++ ++ +LK SGAD+ VVK T+L+
Sbjct: 49 IESSPMLYVSGQVG-ASKTG---SNDFYSQVDRSFDSLQAVLKKSGADFKDVVKITLLIT 104
Query: 143 DLKDFKT---VNEIYAKYFPSPAPARATYQVAALPLDARV-EIECIAAL 187
D K V + A + SP PA V L D + EI+ IA L
Sbjct: 105 DYDPDKLAYMVKKRKAIFGDSP-PASTLIPVTRLYTDGVMFEIDAIAIL 152
>SGD|S000004133 [details] [associations]
symbol:DPH6 "Diphthamide synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0017178 "diphthine-ammonia ligase
activity" evidence=IEA;IMP;IDA] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=IEA;IMP;IDA]
UniPathway:UPA00559 SGD:S000004133 Pfam:PF01042 GO:GO:0005737
EMBL:BK006945 EMBL:X91258 EMBL:U53881 GO:GO:0090305 GO:GO:0004519
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0017183
GeneTree:ENSGT00420000029820 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 HSSP:O58996 eggNOG:COG0251 HOGENOM:HOG000247962
KO:K06927 OMA:GGEFETI OrthoDB:EOG4ZSDBS InterPro:IPR006175
PROSITE:PS01094 EMBL:Z73315 PIR:S64985 RefSeq:NP_013244.1
ProteinModelPortal:Q12429 SMR:Q12429 DIP:DIP-2618N IntAct:Q12429
MINT:MINT-539958 STRING:Q12429 PaxDb:Q12429 PeptideAtlas:Q12429
EnsemblFungi:YLR143W GeneID:850835 KEGG:sce:YLR143W CYGD:YLR143w
BioCyc:MetaCyc:MONOMER-17855 NextBio:967108 Genevestigator:Q12429
GermOnline:YLR143W GO:GO:0017178 Uniprot:Q12429
Length = 685
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 30/118 (25%), Positives = 62/118 (52%)
Query: 78 PYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKT 137
P + K N+ +++S + ++ K S+T+E Q+E + + +IL ++ + ++
Sbjct: 311 PQTTINKTNDKLYISNL-----QSRK--SETVEKQSEDIFTELADILHSNQIPRNHILSA 363
Query: 138 TILLADLKDFKTVNEIY------AKYFPSPAPARATYQVAALPLDARVEIECIAALPN 189
++L+ D+ +F +N+IY +KY P P P+RA LP D V++ + + N
Sbjct: 364 SLLIRDMSNFGKINKIYNEFLDLSKYGPLP-PSRACVGSKCLPEDCHVQLSVVVDVKN 420
>TIGR_CMR|CJE_0372 [details] [associations]
symbol:CJE_0372 "endoribonuclease L-PSP family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF01042 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 RefSeq:YP_178391.1 ProteinModelPortal:Q5HWE4
STRING:Q5HWE4 GeneID:3231134 KEGG:cjr:CJE0372 PATRIC:20042448
OMA:RACTEAR ProtClustDB:CLSK878738
BioCyc:CJEJ195099:GJC0-377-MONOMER Uniprot:Q5HWE4
Length = 116
Score = 93 (37.8 bits), Expect = 0.00019, P = 0.00019
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 106 SDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS-PAPA 164
S I+ QT++ L + + + GA +++ I LA+++DF +NE Y + + P P
Sbjct: 32 SGDIKKQTKEALAELDALFEKIGASKGDLIQIQIWLANMQDFDAMNETYDAWIKNYPKPV 91
Query: 165 RATYQVAALPLDARVEIECIAAL 187
RA +AL VEI+ L
Sbjct: 92 RACVG-SALAEGYLVEIQAFGKL 113
>UNIPROTKB|Q81QU0 [details] [associations]
symbol:BAS2170 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF01042 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:NP_844711.1 RefSeq:YP_018973.1 RefSeq:YP_028431.1
ProteinModelPortal:Q81QU0 DNASU:1084527
EnsemblBacteria:EBBACT00000008551 EnsemblBacteria:EBBACT00000013904
EnsemblBacteria:EBBACT00000019758 GeneID:1084527 GeneID:2817990
GeneID:2848586 KEGG:ban:BA_2326 KEGG:bar:GBAA_2326 KEGG:bat:BAS2170
OMA:VNIWATE ProtClustDB:CLSK918059
BioCyc:BANT260799:GJAJ-2236-MONOMER
BioCyc:BANT261594:GJ7F-2312-MONOMER Uniprot:Q81QU0
Length = 132
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 32/124 (25%), Positives = 63/124 (50%)
Query: 69 TNKAPAALGPYSQAIKA--NNLVFVS-GVLGLVPETGKFVSDTIEDQTEQVLKNIGEILK 125
TN P +G Y+ K N +FVS G +G + + G+F ++ +Q KNI ++L+
Sbjct: 12 TNM-PEPVGNYTHITKIPRNAELFVSSGQIG-INQNGQFPK-SMNEQISNTFKNIIKVLE 68
Query: 126 ASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPL-DARVEIECI 184
+ ++++K + + D+ ++ + + F + PA ++ L L + ++EIE
Sbjct: 69 SEELTAANIIKVNVWATEKIDWAYLDFEWEQLFNTQYPAMTIGYISELGLPEIKIEIEIW 128
Query: 185 AALP 188
AA P
Sbjct: 129 AAKP 132
>TIGR_CMR|BA_2326 [details] [associations]
symbol:BA_2326 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 RefSeq:NP_844711.1 RefSeq:YP_018973.1
RefSeq:YP_028431.1 ProteinModelPortal:Q81QU0 DNASU:1084527
EnsemblBacteria:EBBACT00000008551 EnsemblBacteria:EBBACT00000013904
EnsemblBacteria:EBBACT00000019758 GeneID:1084527 GeneID:2817990
GeneID:2848586 KEGG:ban:BA_2326 KEGG:bar:GBAA_2326 KEGG:bat:BAS2170
OMA:VNIWATE ProtClustDB:CLSK918059
BioCyc:BANT260799:GJAJ-2236-MONOMER
BioCyc:BANT261594:GJ7F-2312-MONOMER Uniprot:Q81QU0
Length = 132
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 32/124 (25%), Positives = 63/124 (50%)
Query: 69 TNKAPAALGPYSQAIKA--NNLVFVS-GVLGLVPETGKFVSDTIEDQTEQVLKNIGEILK 125
TN P +G Y+ K N +FVS G +G + + G+F ++ +Q KNI ++L+
Sbjct: 12 TNM-PEPVGNYTHITKIPRNAELFVSSGQIG-INQNGQFPK-SMNEQISNTFKNIIKVLE 68
Query: 126 ASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPL-DARVEIECI 184
+ ++++K + + D+ ++ + + F + PA ++ L L + ++EIE
Sbjct: 69 SEELTAANIIKVNVWATEKIDWAYLDFEWEQLFNTQYPAMTIGYISELGLPEIKIEIEIW 128
Query: 185 AALP 188
AA P
Sbjct: 129 AAKP 132
>TIGR_CMR|SPO_A0400 [details] [associations]
symbol:SPO_A0400 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:CP000032
GenomeReviews:CP000032_GR InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 RefSeq:YP_165227.1 ProteinModelPortal:Q5LKI1
GeneID:3196570 KEGG:sil:SPOA0400 PATRIC:23382156 OMA:GGQIGWN
ProtClustDB:CLSK767515 Uniprot:Q5LKI1
Length = 131
Score = 93 (37.8 bits), Expect = 0.00078, P = 0.00078
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 72 APAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADY 131
APA G + + + ++V G +G + +F S Q EQ L+NI ++++A+G
Sbjct: 12 APAK-GYANGMLTRDGHLYVGGQIGWNAQQ-QFESHDFIGQMEQALRNILDVVEAAGGRA 69
Query: 132 SSVVKTTILLADLKDFKT-VNEI---YAKYFPSPAPARATYQVAALPLD-ARVEIECIAA 186
+ + T + D K++ +EI Y K PA A V+ L D A VEIE A
Sbjct: 70 EHITRLTWYVIDKKEYMARQSEIGASYRKVMGRHFPAMAMVVVSGLVEDDALVEIEATAV 129
Query: 187 L 187
+
Sbjct: 130 I 130
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 11 22 0.46 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 593 (63 KB)
Total size of DFA: 147 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.59u 0.11s 19.70t Elapsed: 00:00:01
Total cpu time: 19.60u 0.11s 19.71t Elapsed: 00:00:01
Start: Sat May 11 04:31:28 2013 End: Sat May 11 04:31:29 2013