Query 029610
Match_columns 190
No_of_seqs 158 out of 1379
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 15:40:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029610.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029610hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 99.9 7.9E-21 1.7E-25 156.2 12.7 129 2-182 4-136 (220)
2 PRK13226 phosphoglycolate phos 99.8 8.5E-18 1.9E-22 138.8 11.2 123 1-177 11-137 (229)
3 PRK13225 phosphoglycolate phos 99.7 1.3E-16 2.9E-21 135.7 11.3 118 3-177 63-184 (273)
4 PRK11587 putative phosphatase; 99.7 4.1E-16 8.8E-21 127.5 13.1 118 2-176 3-124 (218)
5 PRK13288 pyrophosphatase PpaX; 99.7 2.3E-16 5E-21 128.2 11.2 117 2-176 3-123 (214)
6 TIGR03351 PhnX-like phosphonat 99.7 5.9E-16 1.3E-20 126.0 12.9 121 3-175 2-127 (220)
7 PLN03243 haloacid dehalogenase 99.7 3.6E-16 7.8E-21 132.2 11.7 123 3-178 25-152 (260)
8 PRK13223 phosphoglycolate phos 99.7 8.1E-16 1.8E-20 130.5 13.2 127 1-176 12-142 (272)
9 TIGR01449 PGP_bact 2-phosphogl 99.7 4.1E-16 8.9E-21 125.9 10.1 124 5-178 1-128 (213)
10 PLN02770 haloacid dehalogenase 99.7 6.9E-16 1.5E-20 129.0 11.6 126 2-178 22-151 (248)
11 PRK13478 phosphonoacetaldehyde 99.6 2E-15 4.3E-20 127.2 13.0 130 3-175 5-141 (267)
12 TIGR01422 phosphonatase phosph 99.6 2.4E-15 5.3E-20 125.4 12.8 131 3-176 3-140 (253)
13 PLN02575 haloacid dehalogenase 99.6 2.1E-15 4.5E-20 133.7 11.6 123 3-178 132-259 (381)
14 PRK13222 phosphoglycolate phos 99.6 1.6E-14 3.5E-19 117.4 12.4 127 3-179 7-137 (226)
15 TIGR01454 AHBA_synth_RP 3-amin 99.6 7E-15 1.5E-19 118.8 9.6 112 5-176 1-116 (205)
16 PRK11590 hypothetical protein; 99.6 1.2E-14 2.6E-19 118.8 10.7 123 3-174 7-135 (211)
17 PRK06698 bifunctional 5'-methy 99.6 1.5E-14 3.1E-19 131.0 11.0 128 1-176 240-371 (459)
18 PRK10826 2-deoxyglucose-6-phos 99.6 4.1E-14 9E-19 115.7 11.9 126 1-178 6-135 (222)
19 TIGR02009 PGMB-YQAB-SF beta-ph 99.6 4.6E-14 1E-18 111.4 11.2 119 3-175 2-126 (185)
20 TIGR01990 bPGM beta-phosphoglu 99.5 5E-14 1.1E-18 111.2 10.8 125 4-179 1-129 (185)
21 PLN02779 haloacid dehalogenase 99.5 7.2E-14 1.6E-18 119.5 12.1 135 3-172 41-181 (286)
22 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 3.2E-14 6.9E-19 114.5 8.2 130 4-176 2-147 (197)
23 COG0637 Predicted phosphatase/ 99.5 2E-13 4.3E-18 112.7 12.8 127 1-180 1-131 (221)
24 PRK10725 fructose-1-P/6-phosph 99.5 1.1E-13 2.5E-18 109.7 10.9 120 3-177 6-128 (188)
25 PLN02940 riboflavin kinase 99.5 1.7E-13 3.7E-18 121.7 10.5 118 3-175 12-134 (382)
26 PRK10563 6-phosphogluconate ph 99.5 6.2E-13 1.3E-17 108.4 11.5 123 3-178 5-128 (221)
27 TIGR02252 DREG-2 REG-2-like, H 99.4 4.6E-13 9.9E-18 107.7 9.2 133 3-176 1-145 (203)
28 TIGR02253 CTE7 HAD superfamily 99.4 2.9E-13 6.3E-18 110.0 7.0 40 137-176 92-135 (221)
29 PRK10748 flavin mononucleotide 99.4 8.4E-13 1.8E-17 109.7 8.4 128 3-164 11-140 (238)
30 PRK09449 dUMP phosphatase; Pro 99.4 1.1E-12 2.5E-17 107.0 8.5 40 137-176 93-135 (224)
31 PHA02597 30.2 hypothetical pro 99.4 1.1E-12 2.4E-17 105.3 8.1 110 1-175 1-113 (197)
32 TIGR01993 Pyr-5-nucltdase pyri 99.4 7.5E-13 1.6E-17 105.2 6.5 41 137-177 82-123 (184)
33 PLN02919 haloacid dehalogenase 99.4 6.5E-12 1.4E-16 123.9 12.9 122 3-175 76-201 (1057)
34 TIGR02254 YjjG/YfnB HAD superf 99.3 7.8E-12 1.7E-16 101.3 9.1 43 137-180 95-141 (224)
35 PLN02954 phosphoserine phospha 99.3 5E-11 1.1E-15 97.2 11.5 38 138-175 83-124 (224)
36 TIGR01672 AphA HAD superfamily 99.2 2.5E-11 5.4E-16 101.6 7.6 44 134-177 109-160 (237)
37 PF13419 HAD_2: Haloacid dehal 99.2 8.3E-12 1.8E-16 96.0 3.6 112 5-175 1-117 (176)
38 TIGR01428 HAD_type_II 2-haloal 99.2 8.4E-11 1.8E-15 94.3 9.1 42 137-178 90-135 (198)
39 TIGR01549 HAD-SF-IA-v1 haloaci 99.2 7.1E-11 1.5E-15 90.9 7.7 36 137-172 62-101 (154)
40 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.2 7.4E-11 1.6E-15 94.1 7.3 40 137-176 78-121 (201)
41 TIGR02247 HAD-1A3-hyp Epoxide 99.2 4.4E-11 9.4E-16 96.9 5.8 29 137-165 92-123 (211)
42 PRK09552 mtnX 2-hydroxy-3-keto 99.2 6.6E-11 1.4E-15 96.9 6.9 37 137-174 72-112 (219)
43 TIGR01545 YfhB_g-proteo haloac 99.1 5.2E-10 1.1E-14 91.8 11.4 58 109-174 72-134 (210)
44 TIGR01493 HAD-SF-IA-v2 Haloaci 99.1 2.2E-10 4.7E-15 90.0 7.8 41 137-181 88-129 (175)
45 PRK14988 GMP/IMP nucleotidase; 99.1 7.1E-10 1.5E-14 91.5 10.5 41 136-176 90-134 (224)
46 PRK13582 thrH phosphoserine ph 99.1 7.8E-10 1.7E-14 88.9 9.1 39 136-175 65-107 (205)
47 TIGR00338 serB phosphoserine p 99.1 1.5E-09 3.3E-14 88.2 10.3 40 137-176 83-126 (219)
48 PLN02811 hydrolase 99.0 2.7E-09 5.9E-14 87.3 10.3 107 9-168 1-110 (220)
49 TIGR01489 DKMTPPase-SF 2,3-dik 98.9 7.4E-09 1.6E-13 81.5 7.5 40 138-177 71-114 (188)
50 TIGR02137 HSK-PSP phosphoserin 98.8 2.4E-08 5.3E-13 81.6 9.6 40 137-176 66-108 (203)
51 TIGR01509 HAD-SF-IA-v3 haloaci 98.8 1.5E-08 3.3E-13 79.3 7.7 37 138-175 84-124 (183)
52 PRK09456 ?-D-glucose-1-phospha 98.8 1.1E-07 2.5E-12 76.5 11.8 32 139-170 84-118 (199)
53 COG0560 SerB Phosphoserine pho 98.7 1.1E-07 2.5E-12 78.3 10.6 41 138-178 76-120 (212)
54 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.7 1.2E-07 2.6E-12 75.9 9.2 59 109-176 66-128 (202)
55 KOG2914 Predicted haloacid-hal 98.7 3.1E-07 6.8E-12 76.3 11.5 116 3-173 11-130 (222)
56 TIGR01488 HAD-SF-IB Haloacid D 98.6 1.6E-07 3.5E-12 73.4 7.3 39 137-175 71-113 (177)
57 COG1011 Predicted hydrolase (H 98.6 4.8E-07 1E-11 73.4 10.1 45 137-181 97-144 (229)
58 PRK11133 serB phosphoserine ph 98.5 7.5E-07 1.6E-11 77.8 10.4 40 137-176 179-222 (322)
59 TIGR03333 salvage_mtnX 2-hydro 98.5 1.4E-06 3.1E-11 71.1 10.8 38 137-174 68-109 (214)
60 PRK11009 aphA acid phosphatase 98.5 1.6E-07 3.4E-12 78.8 4.4 42 133-174 108-157 (237)
61 TIGR01662 HAD-SF-IIIA HAD-supe 98.5 4.1E-07 8.8E-12 68.4 6.2 38 138-175 24-73 (132)
62 TIGR01685 MDP-1 magnesium-depe 98.5 1.9E-07 4E-12 74.9 4.3 40 136-175 42-86 (174)
63 PF06888 Put_Phosphatase: Puta 98.4 1.5E-06 3.2E-11 72.8 8.2 47 136-182 68-120 (234)
64 TIGR01691 enolase-ppase 2,3-di 98.1 5.5E-05 1.2E-09 62.7 11.2 38 135-172 91-132 (220)
65 PF00702 Hydrolase: haloacid d 98.0 1.3E-05 2.8E-10 63.9 6.1 40 136-175 124-167 (215)
66 PRK08942 D,D-heptose 1,7-bisph 98.0 7.4E-06 1.6E-10 65.1 4.3 26 138-163 28-56 (181)
67 KOG3120 Predicted haloacid deh 97.9 8.8E-05 1.9E-09 61.6 9.5 115 2-182 13-132 (256)
68 TIGR01533 lipo_e_P4 5'-nucleot 97.9 3.9E-05 8.4E-10 65.4 7.0 41 136-176 115-162 (266)
69 PF12710 HAD: haloacid dehalog 97.8 0.00011 2.3E-09 57.9 8.6 35 142-176 92-130 (192)
70 PRK08238 hypothetical protein; 97.8 0.00017 3.6E-09 66.3 10.7 37 138-174 71-111 (479)
71 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.2 0.00025 5.4E-09 58.9 3.2 46 136-181 21-73 (242)
72 TIGR01261 hisB_Nterm histidino 97.2 0.00025 5.4E-09 55.9 3.0 40 136-175 26-84 (161)
73 PF06941 NT5C: 5' nucleotidase 97.2 0.0014 3.1E-08 52.5 7.2 31 134-164 68-101 (191)
74 TIGR01664 DNA-3'-Pase DNA 3'-p 97.1 0.00052 1.1E-08 54.3 4.0 38 139-176 42-95 (166)
75 TIGR01681 HAD-SF-IIIC HAD-supe 97.0 0.00045 9.8E-09 52.2 2.7 35 139-173 29-68 (128)
76 smart00577 CPDc catalytic doma 97.0 0.0007 1.5E-08 52.3 3.7 39 137-175 43-84 (148)
77 KOG3085 Predicted hydrolase (H 97.0 0.0023 4.9E-08 53.8 6.9 45 137-182 111-159 (237)
78 TIGR01656 Histidinol-ppas hist 96.9 0.0011 2.4E-08 50.9 4.1 38 138-175 26-82 (147)
79 PRK01158 phosphoglycolate phos 96.9 0.00054 1.2E-08 55.8 2.3 30 2-31 3-32 (230)
80 PRK15126 thiamin pyrimidine py 96.9 0.00059 1.3E-08 57.3 2.3 31 1-31 1-31 (272)
81 TIGR00213 GmhB_yaeD D,D-heptos 96.9 0.0014 3E-08 51.8 4.3 26 138-163 25-53 (176)
82 PRK10976 putative hydrolase; P 96.8 0.00065 1.4E-08 56.7 2.3 31 1-31 1-31 (266)
83 TIGR02250 FCP1_euk FCP1-like p 96.8 0.0013 2.7E-08 51.8 3.6 40 136-175 55-97 (156)
84 PTZ00174 phosphomannomutase; P 96.8 0.00067 1.4E-08 56.6 2.1 31 1-31 3-34 (247)
85 PLN02177 glycerol-3-phosphate 96.7 0.023 5E-07 52.6 11.3 57 109-175 89-147 (497)
86 PRK10530 pyridoxal phosphate ( 96.6 0.0012 2.5E-08 55.1 2.3 31 1-31 2-32 (272)
87 PRK10513 sugar phosphate phosp 96.6 0.0014 3E-08 54.8 2.3 30 2-31 3-32 (270)
88 PRK05446 imidazole glycerol-ph 96.5 0.003 6.5E-08 56.0 4.3 42 134-175 25-85 (354)
89 KOG1615 Phosphoserine phosphat 96.5 0.033 7.2E-07 45.7 9.5 41 136-176 85-129 (227)
90 cd01427 HAD_like Haloacid deha 96.4 0.005 1.1E-07 44.4 4.3 45 137-181 22-70 (139)
91 PRK06769 hypothetical protein; 96.4 0.0041 8.9E-08 49.2 4.1 26 138-163 27-55 (173)
92 PRK00192 mannosyl-3-phosphogly 96.4 0.002 4.4E-08 54.3 2.4 31 1-31 3-33 (273)
93 TIGR01675 plant-AP plant acid 96.4 0.012 2.7E-07 49.1 6.7 40 137-176 118-164 (229)
94 TIGR01487 SPP-like sucrose-pho 96.3 0.0025 5.4E-08 51.7 2.4 29 3-31 2-30 (215)
95 COG0561 Cof Predicted hydrolas 96.3 0.0023 5E-08 53.4 2.2 31 1-31 2-32 (264)
96 TIGR01482 SPP-subfamily Sucros 96.2 0.0024 5.2E-08 51.7 1.7 27 5-31 1-27 (225)
97 PHA02530 pseT polynucleotide k 96.2 0.0064 1.4E-07 51.7 4.3 44 137-180 185-233 (300)
98 TIGR01544 HAD-SF-IE haloacid d 96.1 0.031 6.8E-07 48.0 8.1 42 137-178 119-164 (277)
99 PLN02423 phosphomannomutase 96.1 0.0034 7.3E-08 52.6 2.1 29 3-31 8-36 (245)
100 TIGR02244 HAD-IG-Ncltidse HAD 96.1 0.0029 6.3E-08 55.9 1.7 39 135-173 180-223 (343)
101 TIGR01668 YqeG_hyp_ppase HAD s 96.0 0.0096 2.1E-07 47.0 4.4 39 137-175 41-84 (170)
102 PHA03398 viral phosphatase sup 96.0 0.0049 1.1E-07 53.4 2.7 38 141-178 150-191 (303)
103 PF13344 Hydrolase_6: Haloacid 95.9 0.0063 1.4E-07 44.2 2.6 46 137-182 12-64 (101)
104 PLN02645 phosphoglycolate phos 95.8 0.0065 1.4E-07 52.5 2.6 70 113-183 19-95 (311)
105 TIGR01686 FkbH FkbH-like domai 95.8 0.0049 1.1E-07 53.5 1.8 39 137-175 29-75 (320)
106 PF03767 Acid_phosphat_B: HAD 95.7 0.0054 1.2E-07 51.1 1.7 38 139-176 115-159 (229)
107 TIGR01663 PNK-3'Pase polynucle 95.6 0.014 3.1E-07 54.3 4.4 36 140-175 198-249 (526)
108 TIGR01684 viral_ppase viral ph 95.6 0.0085 1.8E-07 51.9 2.4 38 141-178 148-189 (301)
109 PLN02887 hydrolase family prot 95.5 0.0084 1.8E-07 56.5 2.6 31 1-31 307-337 (580)
110 TIGR01689 EcbF-BcbF capsule bi 95.5 0.0079 1.7E-07 45.8 1.9 14 3-16 2-15 (126)
111 PRK03669 mannosyl-3-phosphogly 95.4 0.0092 2E-07 50.3 2.1 29 3-31 8-36 (271)
112 TIGR01680 Veg_Stor_Prot vegeta 95.4 0.053 1.1E-06 46.5 6.7 39 137-175 143-188 (275)
113 TIGR00099 Cof-subfamily Cof su 95.3 0.0092 2E-07 49.5 1.8 28 4-31 1-28 (256)
114 PF08282 Hydrolase_3: haloacid 95.3 0.0082 1.8E-07 48.3 1.3 27 5-31 1-27 (254)
115 PRK12702 mannosyl-3-phosphogly 95.2 0.011 2.4E-07 51.2 2.2 29 3-31 2-30 (302)
116 TIGR01681 HAD-SF-IIIC HAD-supe 95.1 0.027 5.9E-07 42.4 3.6 14 3-16 1-14 (128)
117 TIGR01525 ATPase-IB_hvy heavy 95.1 0.022 4.7E-07 53.2 3.6 44 134-177 379-427 (556)
118 PF12689 Acid_PPase: Acid Phos 95.0 0.037 8E-07 44.2 4.3 40 136-175 42-86 (169)
119 TIGR01484 HAD-SF-IIB HAD-super 95.0 0.012 2.7E-07 46.9 1.6 28 4-31 1-29 (204)
120 COG4359 Uncharacterized conser 94.7 0.32 7E-06 39.7 8.9 37 137-173 71-111 (220)
121 TIGR01456 CECR5 HAD-superfamil 94.4 0.028 6.1E-07 48.8 2.6 27 4-31 2-28 (321)
122 TIGR01512 ATPase-IB2_Cd heavy 94.4 0.034 7.4E-07 51.7 3.2 43 134-176 357-404 (536)
123 smart00775 LNS2 LNS2 domain. T 94.4 0.023 4.9E-07 44.5 1.7 14 4-17 1-14 (157)
124 TIGR01684 viral_ppase viral ph 94.3 0.031 6.8E-07 48.4 2.4 30 2-31 126-158 (301)
125 PRK09484 3-deoxy-D-manno-octul 94.2 0.021 4.5E-07 45.6 1.2 15 2-16 21-35 (183)
126 cd01427 HAD_like Haloacid deha 94.1 0.019 4.1E-07 41.3 0.7 15 4-18 1-15 (139)
127 TIGR02463 MPGP_rel mannosyl-3- 94.0 0.031 6.6E-07 45.3 1.8 15 4-18 1-15 (221)
128 TIGR01670 YrbI-phosphatas 3-de 94.0 0.084 1.8E-06 40.9 4.2 33 144-176 36-69 (154)
129 PHA03398 viral phosphatase sup 93.8 0.042 9.1E-07 47.7 2.3 30 2-31 128-160 (303)
130 TIGR01458 HAD-SF-IIA-hyp3 HAD- 93.7 0.064 1.4E-06 45.1 3.3 44 140-183 22-72 (257)
131 TIGR02461 osmo_MPG_phos mannos 93.7 0.031 6.7E-07 46.1 1.4 27 4-31 1-27 (225)
132 TIGR01486 HAD-SF-IIB-MPGP mann 93.7 0.036 7.7E-07 46.2 1.6 15 4-18 1-15 (256)
133 TIGR01656 Histidinol-ppas hist 93.4 0.042 9E-07 42.1 1.6 16 3-18 1-16 (147)
134 PRK10187 trehalose-6-phosphate 93.4 0.048 1E-06 46.2 2.1 14 3-16 15-28 (266)
135 PF03031 NIF: NLI interacting 93.4 0.033 7.1E-07 43.0 0.9 34 140-173 37-73 (159)
136 TIGR02251 HIF-SF_euk Dullard-l 93.3 0.13 2.9E-06 40.3 4.3 38 139-176 42-82 (162)
137 TIGR01670 YrbI-phosphatas 3-de 93.3 0.036 7.9E-07 43.0 1.0 37 150-188 110-148 (154)
138 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.2 0.13 2.8E-06 43.0 4.3 45 138-182 16-67 (249)
139 TIGR01664 DNA-3'-Pase DNA 3'-p 93.1 0.051 1.1E-06 42.9 1.6 16 2-17 13-28 (166)
140 TIGR01452 PGP_euk phosphoglyco 93.1 0.13 2.8E-06 43.7 4.2 47 137-183 16-69 (279)
141 TIGR02726 phenyl_P_delta pheny 93.0 0.13 2.8E-06 40.9 3.8 30 146-175 44-74 (169)
142 PRK14502 bifunctional mannosyl 92.9 0.067 1.4E-06 51.3 2.4 29 3-31 417-445 (694)
143 TIGR01511 ATPase-IB1_Cu copper 92.8 0.13 2.8E-06 48.1 4.2 39 137-175 403-445 (562)
144 PRK10444 UMP phosphatase; Prov 92.7 0.088 1.9E-06 44.2 2.6 15 3-17 2-16 (248)
145 PLN02499 glycerol-3-phosphate 92.2 1.2 2.6E-05 41.3 9.4 58 109-176 75-134 (498)
146 TIGR02471 sucr_syn_bact_C sucr 92.1 0.14 3E-06 42.0 3.1 25 4-29 1-25 (236)
147 TIGR02726 phenyl_P_delta pheny 92.0 0.074 1.6E-06 42.3 1.3 15 3-17 8-22 (169)
148 TIGR00685 T6PP trehalose-phosp 91.9 0.08 1.7E-06 44.0 1.4 14 3-16 4-17 (244)
149 PF08645 PNK3P: Polynucleotide 91.5 0.097 2.1E-06 41.1 1.4 16 3-18 1-16 (159)
150 TIGR01485 SPP_plant-cyano sucr 91.5 0.21 4.6E-06 41.4 3.5 28 4-31 3-33 (249)
151 COG0647 NagD Predicted sugar p 91.2 0.19 4.1E-06 43.0 3.0 48 136-183 21-76 (269)
152 PF12689 Acid_PPase: Acid Phos 91.1 0.12 2.7E-06 41.2 1.7 16 2-17 3-18 (169)
153 PRK00192 mannosyl-3-phosphogly 91.1 0.35 7.5E-06 40.7 4.5 40 138-177 20-63 (273)
154 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.9 0.091 2E-06 44.2 0.8 32 139-170 120-154 (257)
155 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.8 0.11 2.4E-06 43.4 1.2 28 3-31 2-29 (249)
156 PRK10444 UMP phosphatase; Prov 90.4 0.26 5.6E-06 41.4 3.1 44 139-182 17-67 (248)
157 TIGR01452 PGP_euk phosphoglyco 90.4 0.13 2.8E-06 43.6 1.2 26 138-164 142-170 (279)
158 TIGR01460 HAD-SF-IIA Haloacid 89.8 0.14 3E-06 42.5 0.9 26 5-31 1-26 (236)
159 PLN02645 phosphoglycolate phos 89.7 0.17 3.8E-06 43.7 1.5 28 3-31 29-56 (311)
160 COG1778 Low specificity phosph 89.6 0.18 3.9E-06 40.0 1.4 17 1-17 7-23 (170)
161 PF13344 Hydrolase_6: Haloacid 89.5 0.19 4.1E-06 36.4 1.3 19 5-23 1-19 (101)
162 PLN03017 trehalose-phosphatase 88.3 0.3 6.5E-06 43.6 2.0 29 3-31 112-145 (366)
163 PLN02205 alpha,alpha-trehalose 88.1 0.49 1.1E-05 46.7 3.5 17 1-17 595-611 (854)
164 PRK14501 putative bifunctional 88.0 0.45 9.7E-06 45.9 3.2 13 3-15 493-505 (726)
165 PLN02151 trehalose-phosphatase 87.9 0.32 7E-06 43.2 2.0 29 3-31 99-132 (354)
166 smart00577 CPDc catalytic doma 87.8 0.3 6.6E-06 37.4 1.6 16 3-18 3-18 (148)
167 COG1877 OtsB Trehalose-6-phosp 87.8 0.27 5.8E-06 42.0 1.4 16 3-18 19-34 (266)
168 PRK09484 3-deoxy-D-manno-octul 87.6 0.87 1.9E-05 36.2 4.2 30 147-176 59-89 (183)
169 PF05116 S6PP: Sucrose-6F-phos 87.4 0.66 1.4E-05 38.8 3.5 27 3-29 3-29 (247)
170 KOG3109 Haloacid dehalogenase- 87.1 6.5 0.00014 33.0 9.0 39 137-175 98-138 (244)
171 TIGR00213 GmhB_yaeD D,D-heptos 87.0 0.35 7.7E-06 38.0 1.6 14 3-16 2-15 (176)
172 TIGR01460 HAD-SF-IIA Haloacid 87.0 1.3 2.9E-05 36.5 5.1 47 137-183 12-66 (236)
173 TIGR01522 ATPase-IIA2_Ca golgi 86.3 1.5 3.2E-05 43.4 5.8 38 139-176 528-569 (884)
174 TIGR02245 HAD_IIID1 HAD-superf 86.3 0.38 8.3E-06 39.2 1.4 15 3-17 22-36 (195)
175 PRK10671 copA copper exporting 85.7 1.1 2.4E-05 43.9 4.5 40 137-176 648-691 (834)
176 COG4229 Predicted enolase-phos 85.3 2.1 4.5E-05 35.1 5.1 39 126-165 91-132 (229)
177 PF02358 Trehalose_PPase: Treh 84.8 0.72 1.6E-05 37.9 2.4 13 6-18 1-13 (235)
178 TIGR02461 osmo_MPG_phos mannos 84.4 2.1 4.5E-05 35.2 5.0 39 138-176 14-56 (225)
179 PLN02580 trehalose-phosphatase 84.2 0.54 1.2E-05 42.3 1.5 15 3-17 120-134 (384)
180 TIGR02463 MPGP_rel mannosyl-3- 83.7 1.9 4.2E-05 34.6 4.5 35 141-175 18-56 (221)
181 PRK11033 zntA zinc/cadmium/mer 83.6 1.6 3.4E-05 42.4 4.5 39 138-176 567-609 (741)
182 COG4996 Predicted phosphatase 83.3 0.62 1.3E-05 36.1 1.3 16 3-18 1-16 (164)
183 PRK12702 mannosyl-3-phosphogly 83.0 1.9 4.2E-05 37.5 4.3 41 137-177 16-60 (302)
184 TIGR01261 hisB_Nterm histidino 82.8 0.69 1.5E-05 36.3 1.4 16 3-18 2-17 (161)
185 TIGR01663 PNK-3'Pase polynucle 81.3 0.87 1.9E-05 42.6 1.7 15 3-17 169-183 (526)
186 TIGR02251 HIF-SF_euk Dullard-l 80.6 0.99 2.1E-05 35.3 1.6 15 3-17 2-16 (162)
187 TIGR01456 CECR5 HAD-superfamil 79.5 4.1 8.8E-05 35.4 5.2 47 137-183 14-72 (321)
188 KOG2134 Polynucleotide kinase 79.3 0.91 2E-05 40.9 1.1 19 3-21 76-94 (422)
189 PRK06769 hypothetical protein; 78.9 1.3 2.7E-05 34.9 1.7 12 3-14 5-16 (173)
190 COG0647 NagD Predicted sugar p 78.6 1.3 2.8E-05 38.0 1.8 23 3-25 9-31 (269)
191 PF08645 PNK3P: Polynucleotide 78.3 1.5 3.3E-05 34.3 2.0 23 140-162 30-55 (159)
192 COG3769 Predicted hydrolase (H 77.9 1.3 2.8E-05 37.3 1.5 15 1-15 6-20 (274)
193 COG2179 Predicted hydrolase of 77.1 2.7 5.8E-05 33.7 3.1 35 142-176 49-87 (175)
194 TIGR01487 SPP-like sucrose-pho 76.8 4.4 9.5E-05 32.5 4.4 39 138-176 17-59 (215)
195 PF08282 Hydrolase_3: haloacid 76.6 3.4 7.4E-05 32.9 3.7 37 139-175 15-55 (254)
196 PRK01158 phosphoglycolate phos 75.7 4.8 0.0001 32.4 4.4 37 140-176 21-61 (230)
197 PLN02382 probable sucrose-phos 75.1 1.6 3.5E-05 39.4 1.6 14 4-17 11-24 (413)
198 PRK10530 pyridoxal phosphate ( 74.6 5.9 0.00013 32.6 4.7 38 139-176 20-61 (272)
199 PLN03064 alpha,alpha-trehalose 74.5 1.6 3.5E-05 43.5 1.5 14 3-16 592-605 (934)
200 COG0241 HisB Histidinol phosph 74.4 3.2 6.9E-05 33.5 2.9 24 139-162 31-57 (181)
201 TIGR00099 Cof-subfamily Cof su 74.1 6.2 0.00013 32.5 4.7 38 139-176 16-57 (256)
202 PLN03063 alpha,alpha-trehalose 74.1 1.7 3.6E-05 42.7 1.5 16 3-18 508-523 (797)
203 TIGR01668 YqeG_hyp_ppase HAD s 73.7 2.3 4.9E-05 33.4 1.9 14 3-16 26-39 (170)
204 COG2503 Predicted secreted aci 72.0 11 0.00023 32.2 5.6 41 136-176 119-167 (274)
205 TIGR01482 SPP-subfamily Sucros 71.9 7.3 0.00016 31.1 4.5 37 139-175 15-55 (225)
206 PF09419 PGP_phosphatase: Mito 71.3 5.7 0.00012 31.7 3.6 29 3-31 42-75 (168)
207 TIGR01116 ATPase-IIA1_Ca sarco 71.3 4.8 0.0001 40.0 3.9 39 139-177 537-579 (917)
208 TIGR01459 HAD-SF-IIA-hyp4 HAD- 70.9 1.1 2.3E-05 37.1 -0.7 36 140-176 139-178 (242)
209 PRK15126 thiamin pyrimidine py 70.7 7.3 0.00016 32.4 4.4 38 139-176 19-60 (272)
210 KOG2882 p-Nitrophenyl phosphat 70.6 5.6 0.00012 34.7 3.7 48 133-181 33-88 (306)
211 PRK03669 mannosyl-3-phosphogly 70.0 7.6 0.00017 32.5 4.4 37 139-175 24-64 (271)
212 TIGR01486 HAD-SF-IIB-MPGP mann 69.6 10 0.00022 31.4 5.0 36 140-175 17-56 (256)
213 PF03031 NIF: NLI interacting 68.9 5.1 0.00011 30.5 2.9 16 3-18 1-16 (159)
214 PRK05446 imidazole glycerol-ph 68.6 3.3 7.2E-05 36.8 2.0 17 1-17 1-17 (354)
215 COG0561 Cof Predicted hydrolas 68.2 9.2 0.0002 31.6 4.5 39 138-176 19-61 (264)
216 TIGR01485 SPP_plant-cyano sucr 67.9 6.1 0.00013 32.6 3.4 36 142-177 24-63 (249)
217 PRK10976 putative hydrolase; P 67.5 9.7 0.00021 31.4 4.5 37 140-176 20-60 (266)
218 TIGR02250 FCP1_euk FCP1-like p 66.8 3.5 7.7E-05 32.1 1.6 19 3-21 7-25 (156)
219 TIGR01686 FkbH FkbH-like domai 66.7 3.3 7.1E-05 35.8 1.5 16 2-17 3-18 (320)
220 PRK10513 sugar phosphate phosp 65.8 11 0.00023 31.2 4.5 37 140-176 21-61 (270)
221 smart00775 LNS2 LNS2 domain. T 62.8 15 0.00032 28.5 4.4 33 139-171 27-66 (157)
222 PF08235 LNS2: LNS2 (Lipin/Ned 61.4 4.4 9.6E-05 32.0 1.2 13 4-16 1-13 (157)
223 COG5663 Uncharacterized conser 61.4 3.8 8.2E-05 33.0 0.8 16 4-19 8-23 (194)
224 TIGR02471 sucr_syn_bact_C sucr 61.2 13 0.00028 30.3 4.0 28 150-177 28-56 (236)
225 COG4030 Uncharacterized protei 59.4 29 0.00062 29.6 5.7 37 138-174 82-121 (315)
226 COG4502 5'(3')-deoxyribonucleo 56.9 4.2 9.1E-05 32.0 0.4 29 2-31 3-31 (180)
227 TIGR01484 HAD-SF-IIB HAD-super 56.0 14 0.00031 29.1 3.4 35 139-173 17-55 (204)
228 TIGR01497 kdpB K+-transporting 54.7 28 0.00061 33.7 5.6 50 139-188 446-504 (675)
229 COG0241 HisB Histidinol phosph 54.3 7.6 0.00017 31.3 1.5 17 3-19 6-22 (181)
230 PF03387 Herpes_UL46: Herpesvi 53.6 1.2E+02 0.0025 28.1 9.0 97 9-125 16-114 (444)
231 KOG3040 Predicted sugar phosph 52.4 28 0.0006 29.3 4.5 44 140-183 24-74 (262)
232 PRK10187 trehalose-6-phosphate 51.0 20 0.00043 30.2 3.6 38 137-174 34-76 (266)
233 PRK13762 tRNA-modifying enzyme 50.6 39 0.00084 29.5 5.5 27 137-163 140-169 (322)
234 KOG3189 Phosphomannomutase [Li 50.0 12 0.00027 31.1 2.1 28 4-31 13-40 (252)
235 COG0731 Fe-S oxidoreductases [ 49.7 33 0.00071 29.9 4.8 52 136-187 89-150 (296)
236 COG5083 SMP2 Uncharacterized p 49.4 9.4 0.0002 35.2 1.4 15 3-17 376-390 (580)
237 PHA02530 pseT polynucleotide k 49.2 11 0.00024 31.8 1.8 16 3-18 159-174 (300)
238 PF05152 DUF705: Protein of un 49.1 9.9 0.00021 33.0 1.5 17 2-18 122-138 (297)
239 PF08620 RPAP1_C: RPAP1-like, 48.4 6.5 0.00014 27.1 0.2 10 5-14 3-12 (73)
240 PTZ00445 p36-lilke protein; Pr 46.0 8.5 0.00018 32.0 0.6 13 3-15 44-56 (219)
241 COG4996 Predicted phosphatase 46.0 24 0.00052 27.5 3.0 40 136-175 38-81 (164)
242 COG4087 Soluble P-type ATPase 45.4 24 0.00051 27.5 2.9 40 135-175 26-69 (152)
243 KOG0206 P-type ATPase [General 45.1 61 0.0013 33.4 6.5 39 139-177 651-693 (1151)
244 TIGR02245 HAD_IIID1 HAD-superf 44.7 36 0.00079 27.7 4.1 33 142-174 48-83 (195)
245 TIGR01689 EcbF-BcbF capsule bi 43.2 36 0.00077 25.7 3.6 30 138-167 23-55 (126)
246 PRK11426 hypothetical protein; 42.0 38 0.00083 26.0 3.6 30 100-129 74-103 (132)
247 COG1778 Low specificity phosph 41.6 42 0.00092 26.8 3.8 35 142-176 40-76 (170)
248 KOG1605 TFIIF-interacting CTD 40.7 16 0.00035 31.2 1.5 17 2-18 89-105 (262)
249 PRK14502 bifunctional mannosyl 40.3 42 0.0009 32.7 4.3 37 139-175 433-473 (694)
250 PF08006 DUF1700: Protein of u 40.2 73 0.0016 25.0 5.2 21 109-129 16-36 (181)
251 PLN02887 hydrolase family prot 40.1 42 0.00091 31.9 4.3 37 139-175 325-365 (580)
252 TIGR02244 HAD-IG-Ncltidse HAD 39.5 15 0.00033 32.5 1.2 16 3-18 13-28 (343)
253 COG2179 Predicted hydrolase of 39.1 17 0.00037 29.2 1.3 12 3-14 29-40 (175)
254 smart00266 CAD Domains present 37.9 18 0.00039 25.0 1.1 15 4-18 40-54 (74)
255 cd06537 CIDE_N_B CIDE_N domain 37.7 18 0.0004 25.4 1.2 15 4-18 41-55 (81)
256 cd01615 CIDE_N CIDE_N domain, 37.1 19 0.00041 25.1 1.1 15 4-18 42-56 (78)
257 COG2442 Uncharacterized conser 36.7 98 0.0021 21.5 4.7 29 87-125 43-71 (79)
258 cd06539 CIDE_N_A CIDE_N domain 36.3 20 0.00044 25.0 1.2 15 4-18 42-56 (78)
259 PF06117 DUF957: Enterobacteri 35.7 58 0.0013 21.8 3.2 28 3-31 25-52 (65)
260 KOG0398 Mitochondrial/chloropl 35.2 40 0.00087 28.4 2.9 41 138-178 229-275 (278)
261 cd06536 CIDE_N_ICAD CIDE_N dom 35.1 21 0.00046 25.0 1.1 15 4-18 44-58 (80)
262 PRK01122 potassium-transportin 34.7 1.1E+02 0.0023 29.9 6.1 37 139-175 445-485 (679)
263 PF06189 5-nucleotidase: 5'-nu 34.5 20 0.00043 30.7 1.1 17 5-21 124-140 (264)
264 PRK10076 pyruvate formate lyas 33.7 85 0.0018 25.7 4.7 61 110-170 19-87 (213)
265 PF02017 CIDE-N: CIDE-N domain 33.5 24 0.00051 24.6 1.1 15 4-18 42-56 (78)
266 TIGR01647 ATPase-IIIA_H plasma 33.2 61 0.0013 31.7 4.3 38 139-176 442-483 (755)
267 PF05822 UMPH-1: Pyrimidine 5' 32.6 1.4E+02 0.003 25.3 5.9 60 102-175 67-130 (246)
268 TIGR01106 ATPase-IIC_X-K sodiu 32.5 56 0.0012 33.0 4.0 37 139-175 568-608 (997)
269 TIGR01494 ATPase_P-type ATPase 32.5 74 0.0016 29.1 4.6 37 138-174 346-386 (499)
270 PF06901 FrpC: RTX iron-regula 32.1 23 0.0005 29.3 1.0 18 3-20 59-76 (271)
271 PF05761 5_nucleotid: 5' nucle 31.5 58 0.0013 30.0 3.7 33 142-174 186-223 (448)
272 TIGR01524 ATPase-IIIB_Mg magne 31.3 1.2E+02 0.0025 30.3 6.0 37 139-175 515-555 (867)
273 PTZ00174 phosphomannomutase; P 31.1 71 0.0015 26.3 3.9 32 139-170 22-56 (247)
274 TIGR01523 ATPase-IID_K-Na pota 31.0 67 0.0014 32.8 4.3 38 139-176 646-687 (1053)
275 PF13720 Acetyltransf_11: Udp 29.7 45 0.00098 23.2 2.1 24 104-127 22-45 (83)
276 cd06538 CIDE_N_FSP27 CIDE_N do 29.2 31 0.00066 24.2 1.1 15 4-18 41-55 (79)
277 KOG4549 Magnesium-dependent ph 28.8 1.1E+02 0.0023 23.7 4.1 40 137-176 42-86 (144)
278 PLN02580 trehalose-phosphatase 28.7 65 0.0014 29.1 3.4 35 137-171 139-176 (384)
279 PRK00010 rplE 50S ribosomal pr 28.5 62 0.0013 26.0 3.0 39 137-177 134-178 (179)
280 CHL00078 rpl5 ribosomal protei 28.5 62 0.0014 26.1 3.0 38 138-177 136-179 (181)
281 KOG1618 Predicted phosphatase 28.2 28 0.00061 31.0 1.0 27 4-31 37-63 (389)
282 PRK14010 potassium-transportin 28.1 84 0.0018 30.5 4.3 37 139-175 441-481 (673)
283 smart00497 IENR1 Intron encode 28.0 46 0.00099 20.3 1.7 26 3-32 3-28 (53)
284 TIGR01517 ATPase-IIB_Ca plasma 27.6 89 0.0019 31.3 4.5 38 139-176 579-620 (941)
285 PHA03321 tegument protein VP11 27.2 4.4E+02 0.0095 25.6 8.6 100 9-127 36-136 (694)
286 PF09419 PGP_phosphatase: Mito 26.8 1E+02 0.0023 24.4 4.0 38 138-175 58-108 (168)
287 PLN02151 trehalose-phosphatase 26.6 74 0.0016 28.4 3.4 34 137-170 118-153 (354)
288 PF04255 DUF433: Protein of un 25.0 1.9E+02 0.0041 18.3 4.3 24 87-120 31-54 (56)
289 COG3882 FkbH Predicted enzyme 24.5 41 0.0009 31.5 1.4 16 2-17 222-237 (574)
290 KOG2469 IMP-GMP specific 5'-nu 24.0 39 0.00084 30.8 1.1 27 150-176 212-240 (424)
291 COG2217 ZntA Cation transport 23.9 1.1E+02 0.0024 29.9 4.2 37 139-175 537-577 (713)
292 PF02358 Trehalose_PPase: Treh 23.8 54 0.0012 26.7 1.9 38 137-174 17-59 (235)
293 PHA03322 tegument protein VP11 23.3 3.1E+02 0.0068 26.4 6.9 98 9-126 35-134 (674)
294 TIGR01652 ATPase-Plipid phosph 23.2 1E+02 0.0022 31.4 4.0 39 139-177 631-673 (1057)
295 PRK15122 magnesium-transportin 22.5 1.1E+02 0.0023 30.7 4.0 37 139-175 550-590 (903)
296 PLN03017 trehalose-phosphatase 22.5 1.1E+02 0.0024 27.5 3.6 32 139-170 133-166 (366)
297 PF10551 MULE: MULE transposas 22.4 1.8E+02 0.0038 19.6 4.1 36 154-189 57-93 (93)
298 cd00153 RalGDS_RA Ubiquitin do 22.0 31 0.00068 24.5 0.1 36 153-188 18-56 (87)
299 KOG1613 Exosomal 3'-5' exoribo 21.8 78 0.0017 27.1 2.4 27 2-31 151-177 (298)
300 PRK10517 magnesium-transportin 20.7 1.3E+02 0.0027 30.2 4.1 37 139-175 550-590 (902)
301 TIGR01657 P-ATPase-V P-type AT 20.5 1.6E+02 0.0034 30.1 4.7 38 139-176 656-697 (1054)
302 cd06535 CIDE_N_CAD CIDE_N doma 20.1 71 0.0015 22.2 1.6 19 4-24 42-60 (77)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.85 E-value=7.9e-21 Score=156.24 Aligned_cols=129 Identities=22% Similarity=0.275 Sum_probs=100.8
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
.++|+||+||||+||.+.+..|++.+++.++ ++.. ....++.+||.|.+.++ .+.+..
T Consensus 4 ~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~ig~~~~~~~-~~~~~~-------- 61 (220)
T COG0546 4 IKAILFDLDGTLVDSAEDILRAFNAALAELG------LPPL-------DEEEIRQLIGLGLDELI-ERLLGE-------- 61 (220)
T ss_pred CCEEEEeCCCccccChHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhcCCHHHHH-HHHhcc--------
Confidence 4899999999999999999999999999994 5543 24789999999988755 222211
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
... +...+.++.|+++|.+.|.+.. .+++||||.++|+ ++|++++|+
T Consensus 62 ------~~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~ 111 (220)
T COG0546 62 ------ADE----------------------EAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGIV 111 (220)
T ss_pred ------ccc----------------------hhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEEE
Confidence 000 0011445667777777766554 5799999999999 899999999
Q ss_pred cCCChHHHHHHH-HhCCCCchHHHH
Q 029610 159 TTKQMLYYESLQ-ELQYHLTEFMVW 182 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~~~~~~v~ 182 (190)
|||++..+..++ ++|+...+..|.
T Consensus 112 T~k~~~~~~~~l~~~gl~~~F~~i~ 136 (220)
T COG0546 112 TNKPERELDILLKALGLADYFDVIV 136 (220)
T ss_pred eCCcHHHHHHHHHHhCCccccceEE
Confidence 999999999999 999988876543
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.75 E-value=8.5e-18 Score=138.78 Aligned_cols=123 Identities=20% Similarity=0.249 Sum_probs=90.7
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccc
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~ 80 (190)
|.++|+|||||||+||.+.+..+.+.+++++ |++..+ .+.++..+|.|.+..+ +.+..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~--~~~~~------- 68 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPIT-------LAQLRPVVSKGARAML--AVAFP------- 68 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhhhHHHHHH--HHHhc-------
Confidence 7799999999999999999999999999999 455432 4667888888876543 22211
Q ss_pred ccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEE
Q 029610 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (190)
. .+++..++....+++.|.+.+ ....++|||+.++|+ ++|++++|
T Consensus 69 ------~----------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i 116 (229)
T PRK13226 69 ------E----------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGI 116 (229)
T ss_pred ------c----------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence 0 111222344455566655432 335689999999999 78999999
Q ss_pred EcCCChHHHHHHH-HhCCCCc
Q 029610 158 VTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~~~ 177 (190)
+||++...+..++ ++|+...
T Consensus 117 ~Tn~~~~~~~~~l~~~~l~~~ 137 (229)
T PRK13226 117 VTNKPEYLARLILPQLGWEQR 137 (229)
T ss_pred ECCCCHHHHHHHHHHcCchhc
Confidence 9999999999999 9988543
No 3
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.70 E-value=1.3e-16 Score=135.72 Aligned_cols=118 Identities=19% Similarity=0.144 Sum_probs=85.2
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++++|||||||+||.+.+..+.+.+++.+| ++..+ .+.++.++|...+.++ +.
T Consensus 63 k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~~~~-------~~~~~~~~g~~~~~i~--~~------------ 115 (273)
T PRK13225 63 QAIIFDFDGTLVDSLPTVVAIANAHAPDFG------YDPID-------ERDYAQLRQWSSRTIV--RR------------ 115 (273)
T ss_pred CEEEECCcCccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH--HH------------
Confidence 789999999999999999999999999994 44332 2345555665443321 11
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEc
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT 159 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (190)
++.++++.++....|+++|.+ +....++|||+.++|+ ++|++++|+|
T Consensus 116 -------------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi~laIvS 165 (273)
T PRK13225 116 -------------------------AGLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSLCLGILS 165 (273)
T ss_pred -------------------------cCCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCCeEEEEe
Confidence 122233334445556555532 2346789999999999 7899999999
Q ss_pred CCChHHHHHHH-HhCCCCc
Q 029610 160 TKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 160 nK~~~~a~~lL-~~gl~~~ 177 (190)
|+++..++.++ ++|+...
T Consensus 166 n~~~~~~~~~L~~~gl~~~ 184 (273)
T PRK13225 166 SNSRQNIEAFLQRQGLRSL 184 (273)
T ss_pred CCCHHHHHHHHHHcCChhh
Confidence 99999999999 9998643
No 4
>PRK11587 putative phosphatase; Provisional
Probab=99.69 E-value=4.1e-16 Score=127.51 Aligned_cols=118 Identities=17% Similarity=0.134 Sum_probs=79.4
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
.++|+|||||||+||.+.+..+.+.+++++ |++.. +..+.+.|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH--HHHhc--------
Confidence 389999999999999999999999999999 45421 223444576655433 22211
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
+ .+.+.+.+.+..++ .|.. ......++|||+.++|+ ++|++++|+
T Consensus 58 -----~----------------------~~~~~~~~~~~~~~-~~~~----~~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 -----G----------------------ASEAEIQAEFTRLE-QIEA----TDTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred -----c----------------------CCcHHHHHHHHHHH-HHHH----hhhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 0 11112222222211 1211 12346789999999998 789999999
Q ss_pred cCCChHHHHHHH-HhCCCC
Q 029610 159 TTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~~ 176 (190)
||++...+...+ ..|+..
T Consensus 106 Tn~~~~~~~~~l~~~~l~~ 124 (218)
T PRK11587 106 TSGSVPVASARHKAAGLPA 124 (218)
T ss_pred cCCCchHHHHHHHhcCCCC
Confidence 999999888888 888854
No 5
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.69 E-value=2.3e-16 Score=128.22 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=83.1
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
.++|+|||||||+||.+.+..+.+.++++++ .+..+ .+.++...|.+....+ +.+
T Consensus 3 ~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~~~~~~G~~~~~~~--~~~---------- 57 (214)
T PRK13288 3 INTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------REDVLPFIGPSLHDTF--SKI---------- 57 (214)
T ss_pred ccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHHHHHHhCcCHHHHH--Hhc----------
Confidence 4899999999999999999999999999994 32221 2445666665543321 111
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
.++..++....|+..|.+. .....++|||+.++|+ ++|++++|+
T Consensus 58 -----------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~~~i~ 104 (214)
T PRK13288 58 -----------------------------DESKVEEMITTYREFNHEH----HDELVTEYETVYETLKTLKKQGYKLGIV 104 (214)
T ss_pred -----------------------------CHHHHHHHHHHHHHHHHHh----hhhhcccCcCHHHHHHHHHHCCCeEEEE
Confidence 1122233344455554332 2345789999999999 789999999
Q ss_pred cCCChHHHHHHH-HhCCCC
Q 029610 159 TTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~~ 176 (190)
||+++..+...+ .+|+..
T Consensus 105 S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 105 TTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred eCCCHHHHHHHHHHcCChh
Confidence 999999999999 999864
No 6
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.68 E-value=5.9e-16 Score=126.04 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=86.9
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhh-ccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHIL-RPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~i-r~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++|+|||||||+||.+.+..+.+.+++.+| ++.. .+++ +.+.|.+...++ +.+..
T Consensus 2 k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~~g~~~~~~~--~~~~~-------- 57 (220)
T TIGR03351 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAAG------LSPT--------PEEVQSAWMGQSKIEAI--RALLA-------- 57 (220)
T ss_pred cEEEEecCCCeeccCchHHHHHHHHHHHcC------CCCC--------HHHHHHhhcCCCHHHHH--HHHHh--------
Confidence 789999999999999999999999999984 5432 1233 337777655433 22211
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
.+|.+++..++.+..|++.|...|.. ...++|||+.++|+ ++|++++|+
T Consensus 58 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~iv 109 (220)
T TIGR03351 58 -------------------------LDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVALT 109 (220)
T ss_pred -------------------------ccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEEE
Confidence 11233333445556666666544321 24689999999999 789999999
Q ss_pred cCCChHHHHHHH-HhCCC
Q 029610 159 TTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~ 175 (190)
||++...+..+| ++|+.
T Consensus 110 T~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 110 TGFDRDTAERLLEKLGWT 127 (220)
T ss_pred eCCchHHHHHHHHHhhhh
Confidence 999999999999 99986
No 7
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.68 E-value=3.6e-16 Score=132.20 Aligned_cols=123 Identities=15% Similarity=0.055 Sum_probs=84.1
Q ss_pred cEEEEecCcccccChHHHHH-HHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSL-SAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~-a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++|+|||||||+||.+.++. +.+.+++++| ++... .+.++.++|.+....+ +.+...
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G------~~~~~-------~e~~~~~~G~~~~~~~--~~l~~~------- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEEG------KRPPP-------AFLLKRAEGMKNEQAI--SEVLCW------- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH--HHHhcc-------
Confidence 78999999999999877764 7789999994 44321 2456778998876543 222110
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
. .+.+...+....++.+|... .....++|||+.++|+ ++|++++|+
T Consensus 83 -----~----------------------~~~~~~~~l~~~~~~~~~~~----~~~~~~l~pg~~e~L~~L~~~g~~l~I~ 131 (260)
T PLN03243 83 -----S----------------------RDFLQMKRLAIRKEDLYEYM----QGGLYRLRPGSREFVQALKKHEIPIAVA 131 (260)
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHH----HccCcccCCCHHHHHHHHHHCCCEEEEE
Confidence 0 01112223333344444211 1234689999999999 789999999
Q ss_pred cCCChHHHHHHH-HhCCCCch
Q 029610 159 TTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~~~~ 178 (190)
||++...++.++ ++|+...+
T Consensus 132 Tn~~~~~~~~~l~~~gl~~~F 152 (260)
T PLN03243 132 STRPRRYLERAIEAVGMEGFF 152 (260)
T ss_pred eCcCHHHHHHHHHHcCCHhhC
Confidence 999999999999 99986433
No 8
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.67 E-value=8.1e-16 Score=130.52 Aligned_cols=127 Identities=18% Similarity=0.245 Sum_probs=90.7
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccc
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~ 80 (190)
|.++|+|||||||+||.+.+..+.+.+++.+| ++.. ..+.++.++|+|...++ ...+..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~~l~~------- 70 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELG------RPPA-------GLEAVRHWVGNGAPVLV-RRALAG------- 70 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhChhHHHHH-HHHhcc-------
Confidence 67899999999999999999999999999994 4432 13567788998876533 122210
Q ss_pred ccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEE
Q 029610 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (190)
. ...++.+++..++....|++.|... .....+|||+.++|+ ++|++++|
T Consensus 71 ------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~i 122 (272)
T PRK13223 71 ------S-----------------IDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMAL 122 (272)
T ss_pred ------c-----------------ccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence 0 0011233344445555566655432 234689999999999 78999999
Q ss_pred EcCCChHHHHHHH-HhCCCC
Q 029610 158 VTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~~ 176 (190)
+||++...+..++ ++|+..
T Consensus 123 vTn~~~~~~~~~l~~~~i~~ 142 (272)
T PRK13223 123 ITNKPERFVAPLLDQMKIGR 142 (272)
T ss_pred EECCcHHHHHHHHHHcCcHh
Confidence 9999999999999 888743
No 9
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.67 E-value=4.1e-16 Score=125.91 Aligned_cols=124 Identities=17% Similarity=0.166 Sum_probs=86.2
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccccc
Q 029610 5 YALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSV 84 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~~ 84 (190)
|+|||||||+||.+.+..+.+.+++.++ ++..+ .+.++.++|.+....+ +.+....
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~g~~~~~~~--~~~~~~~--------- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALG------LPPAT-------LARVIGFIGNGVPVLM--ERVLAWA--------- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhcccHHHHH--HHHhhcc---------
Confidence 6999999999999999999999999994 54332 3556677787765433 2221100
Q ss_pred ccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCC
Q 029610 85 SEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK 161 (190)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK 161 (190)
+. ..+.+..++..+.|.++|.+. .....++|||+.++|+ ++|++++|+||+
T Consensus 57 --~~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~ 110 (213)
T TIGR01449 57 --GQ--------------------EPDAQRVAELRKLFDRHYEEV----AGELTSVFPGVEATLGALRAKGLRLGLVTNK 110 (213)
T ss_pred --cc--------------------ccChHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 00 012223334445555555433 3445789999999999 789999999999
Q ss_pred ChHHHHHHH-HhCCCCch
Q 029610 162 QMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 162 ~~~~a~~lL-~~gl~~~~ 178 (190)
+...++.++ ++|+...+
T Consensus 111 ~~~~~~~~l~~~~l~~~f 128 (213)
T TIGR01449 111 PTPLARPLLELLGLAKYF 128 (213)
T ss_pred CHHHHHHHHHHcCcHhhC
Confidence 999999999 99985433
No 10
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.66 E-value=6.9e-16 Score=129.00 Aligned_cols=126 Identities=13% Similarity=0.023 Sum_probs=84.5
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
.++|+|||||||+||.+.+..+.+.+++++|.+ .|.+.. .....+.++|.+.+..+ +.+..
T Consensus 22 ~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~~~-------~~~~~~~~~G~~~~~~~--~~~~~-------- 82 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVPIT-------EEFFVENIAGKHNEDIA--LGLFP-------- 82 (248)
T ss_pred cCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCCCC-------HHHHHHHcCCCCHHHHH--HHHcC--------
Confidence 478999999999999999999999999999421 012211 11234667787766533 22211
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
. .. +...+....++.+|.+.. .....+|||+.++|+ ++|++++|+
T Consensus 83 -----~-~~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I~ 130 (248)
T PLN02770 83 -----D-DL----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAAV 130 (248)
T ss_pred -----c-ch----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEEE
Confidence 0 00 001112233444444322 235789999999999 789999999
Q ss_pred cCCChHHHHHHH-HhCCCCch
Q 029610 159 TTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~~~~ 178 (190)
||+++..++..+ ++|+...+
T Consensus 131 Tn~~~~~~~~~l~~~gl~~~F 151 (248)
T PLN02770 131 TNAPRENAELMISLLGLSDFF 151 (248)
T ss_pred eCCCHHHHHHHHHHcCChhhC
Confidence 999999999999 99986443
No 11
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.65 E-value=2e-15 Score=127.20 Aligned_cols=130 Identities=13% Similarity=0.083 Sum_probs=85.6
Q ss_pred cEEEEecCcccccChHH-HHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSCGE-SSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~-i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++|+|||||||+||... ...+.+.+++.+| ++.. .++++..+|.+....+ +.+..
T Consensus 5 k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~G~~~~~~~--~~~~~-------- 60 (267)
T PRK13478 5 QAVIFDWAGTTVDFGSFAPTQAFVEAFAQFG------VEIT--------LEEARGPMGLGKWDHI--RALLK-------- 60 (267)
T ss_pred EEEEEcCCCCeecCCCccHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHh--------
Confidence 89999999999999654 3678889999884 4421 2456677787654433 22211
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccC--ChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSE--NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIY 156 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~--~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~la 156 (190)
... +...+...+|. ++++..+....|+.+|.+. ......+|||+.++|+ ++|++++
T Consensus 61 --------~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~~g~~l~ 121 (267)
T PRK13478 61 --------MPR-------VAARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRARGIKIG 121 (267)
T ss_pred --------cHH-------HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHHCCCEEE
Confidence 000 01111122232 3344555556666665443 2345789999999999 7899999
Q ss_pred EEcCCChHHHHHHH-HhCCC
Q 029610 157 IVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 157 I~TnK~~~~a~~lL-~~gl~ 175 (190)
|+||+++..+..++ .+++.
T Consensus 122 I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 122 STTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred EEcCCcHHHHHHHHHHHhhc
Confidence 99999999999998 87753
No 12
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.64 E-value=2.4e-15 Score=125.38 Aligned_cols=131 Identities=14% Similarity=0.120 Sum_probs=87.7
Q ss_pred cEEEEecCcccccChH-HHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSCG-ESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~-~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++|+|||||||+||.. .+..+.+.+++.+| ++.. .++++..+|.+....+ +.+..
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~G~~~~~~~--~~~~~-------- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEFG------VQIT--------LEEARGPMGLGKWDHI--RALLK-------- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHcC------CCcc--------HHHHHHhcCccHHHHH--HHHhc--------
Confidence 6899999999999965 34778888998884 4421 2456677787765433 22211
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhcc--CChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIY 156 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~la 156 (190)
...... .+.+.+| .+++++.+....|+++|.+. .....++|||+.++|+ ++|++++
T Consensus 59 --------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~l~ 119 (253)
T TIGR01422 59 --------MPAVAE-------RWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRARGIKIG 119 (253)
T ss_pred --------CHHHHH-------HHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHHCCCeEE
Confidence 000111 1122223 23444555566666665443 2345789999999999 7899999
Q ss_pred EEcCCChHHHHHHH-HhCCCC
Q 029610 157 IVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 157 I~TnK~~~~a~~lL-~~gl~~ 176 (190)
|+||+++..++.++ ++|+..
T Consensus 120 IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 120 STTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred EECCCcHHHHHHHHHHHHhcC
Confidence 99999999999999 888754
No 13
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.63 E-value=2.1e-15 Score=133.67 Aligned_cols=123 Identities=14% Similarity=0.061 Sum_probs=85.7
Q ss_pred cEEEEecCcccccChHHHHH-HHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSL-SAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~-a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++|||||||||+||.+.++. +.+.+++.+| ++..+ .+.++.++|.+.+..+ +.+...
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G------~~~~~-------~e~~~~~~G~~~~~~l--~~ll~~------- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEEG------KSPPP-------AFILRRVEGMKNEQAI--SEVLCW------- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH--HHHhhc-------
Confidence 78999999999999998886 5555667774 54331 2456788888876643 222110
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 158 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (190)
..++++.++....++++|.+. ......+|||+.++|+ ++|++++|+
T Consensus 190 ---------------------------~~~~~~~e~l~~~~~~~y~~~----~~~~~~l~pGa~ElL~~Lk~~GiklaIa 238 (381)
T PLN02575 190 ---------------------------SRDPAELRRMATRKEEIYQAL----QGGIYRLRTGSQEFVNVLMNYKIPMALV 238 (381)
T ss_pred ---------------------------cCCHHHHHHHHHHHHHHHHHH----hccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence 011222334445555555433 2345689999999999 889999999
Q ss_pred cCCChHHHHHHH-HhCCCCch
Q 029610 159 TTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~~~~ 178 (190)
||+++..++.++ ++||..-+
T Consensus 239 Sn~~~~~~~~~L~~lgL~~yF 259 (381)
T PLN02575 239 STRPRKTLENAIGSIGIRGFF 259 (381)
T ss_pred eCCCHHHHHHHHHHcCCHHHc
Confidence 999999999999 99986543
No 14
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.59 E-value=1.6e-14 Score=117.45 Aligned_cols=127 Identities=23% Similarity=0.254 Sum_probs=90.2
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+....+.+.+++.++ .+.++ .+.++.++|.+...++ .+.+.. .
T Consensus 7 ~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~-~------- 64 (226)
T PRK13222 7 RAVAFDLDGTLVDSAPDLAAAVNAALAALG------LPPAG-------EERVRTWVGNGADVLV-ERALTW-A------- 64 (226)
T ss_pred cEEEEcCCcccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH-HHHHhh-c-------
Confidence 899999999999999999999999999884 44332 3556778888876543 222211 0
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEc
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT 159 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (190)
+ ...+.++.++....+.++|... .....+++||+.++|+ ++|++++|+|
T Consensus 65 ----~--------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i~S 116 (226)
T PRK13222 65 ----G--------------------REPDEELLEKLRELFDRHYAEN----VAGGSRLYPGVKETLAALKAAGYPLAVVT 116 (226)
T ss_pred ----c--------------------CCccHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEEe
Confidence 0 0123334444455555555432 2345789999999999 7899999999
Q ss_pred CCChHHHHHHH-HhCCCCchH
Q 029610 160 TKQMLYYESLQ-ELQYHLTEF 179 (190)
Q Consensus 160 nK~~~~a~~lL-~~gl~~~~~ 179 (190)
|+....++.++ ++|+...+.
T Consensus 117 ~~~~~~~~~~l~~~~l~~~f~ 137 (226)
T PRK13222 117 NKPTPFVAPLLEALGIADYFS 137 (226)
T ss_pred CCCHHHHHHHHHHcCCccCcc
Confidence 99999999999 999865443
No 15
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.59 E-value=7e-15 Score=118.78 Aligned_cols=112 Identities=23% Similarity=0.279 Sum_probs=78.2
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccccc
Q 029610 5 YALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSV 84 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~~ 84 (190)
|+|||||||+||.+.+..+.+.+++.+. |.+.. ..+.++.++|.+.+..+ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~g~~~~~~~--~~~------------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEEYRRHLGRYFPDIM--RIM------------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHHHHHHhCccHHHHH--HHc-------------
Confidence 6999999999999999999999999852 33322 13567778887766533 211
Q ss_pred ccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCC
Q 029610 85 SEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK 161 (190)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK 161 (190)
+. +.+.... .++..|. .....++|||+.++|+ ++|++++|+||+
T Consensus 54 --~~----------------------~~~~~~~---~~~~~~~------~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~ 100 (205)
T TIGR01454 54 --GL----------------------PLEMEEP---FVRESYR------LAGEVEVFPGVPELLAELRADGVGTAIATGK 100 (205)
T ss_pred --CC----------------------CHHHHHH---HHHHHHH------hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 11 0000000 0111111 1245799999999999 789999999999
Q ss_pred ChHHHHHHH-HhCCCC
Q 029610 162 QMLYYESLQ-ELQYHL 176 (190)
Q Consensus 162 ~~~~a~~lL-~~gl~~ 176 (190)
+...++..+ ++|+..
T Consensus 101 ~~~~~~~~l~~~~l~~ 116 (205)
T TIGR01454 101 SGPRARSLLEALGLLP 116 (205)
T ss_pred chHHHHHHHHHcCChh
Confidence 999999999 999854
No 16
>PRK11590 hypothetical protein; Provisional
Probab=99.58 E-value=1.2e-14 Score=118.78 Aligned_cols=123 Identities=14% Similarity=0.134 Sum_probs=85.9
Q ss_pred cEEEEecCcccccChHHHHHHHHHHH-HHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAA-KVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~-~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++++|||||||+ .+++..+++..+ +++ |++.. ....++.++|.|.....-.+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~~~~~ig~~l~~~~~~~~~---------- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLPLLPVIGLGLLVKGRAARW---------- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhHHHHHhccCcccchhhhhh----------
Confidence 799999999999 666888888877 777 34433 2467788899886542210000
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH----hCCCcEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK----FASSRIYI 157 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~----~~g~~laI 157 (190)
+ ...++ -. ...|.+++++++..+.|+++|.+. ..+|||+.++|+ ++|++++|
T Consensus 62 -----~--~~~~~-------~~--~~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I 117 (211)
T PRK11590 62 -----P--MSLLL-------WG--CTFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL 117 (211)
T ss_pred -----h--HHHHH-------HH--HHcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence 0 00000 00 012556677777788887776432 578999999994 57999999
Q ss_pred EcCCChHHHHHHH-HhCC
Q 029610 158 VTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl 174 (190)
||||++..++.++ .+|+
T Consensus 118 vSas~~~~~~~il~~l~~ 135 (211)
T PRK11590 118 ITGSPQPLVEQVYFDTPW 135 (211)
T ss_pred EeCCcHHHHHHHHHHccc
Confidence 9999999999999 9885
No 17
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.57 E-value=1.5e-14 Score=131.01 Aligned_cols=128 Identities=14% Similarity=0.140 Sum_probs=83.7
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccc
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~ 80 (190)
|.++|+|||||||+||.+.+..+.+.++++++.....+... ..+.++.++|......+ +.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~--------~~~~~~~~~G~~~~~~~--~~l~~------- 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT--------PIDKYREIMGVPLPKVW--EALLP------- 302 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC--------CHHHHHHHcCCChHHHH--HHHhh-------
Confidence 56899999999999999999999999999983110000111 12456777887765533 22211
Q ss_pred ccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEE
Q 029610 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (190)
. .+ .+..++....|+++|.+.. .....+||||+.++|+ ++|++++|
T Consensus 303 ------~--------------------~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~I 351 (459)
T PRK06698 303 ------D--------------------HS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIYI 351 (459)
T ss_pred ------h--------------------cc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEEE
Confidence 0 00 0001112223333332211 1235689999999998 78999999
Q ss_pred EcCCChHHHHHHH-HhCCCC
Q 029610 158 VTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~~ 176 (190)
+||++...+..++ ++|+..
T Consensus 352 vS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 352 ASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred EeCCchHHHHHHHHHCCcHh
Confidence 9999999999999 999854
No 18
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.56 E-value=4.1e-14 Score=115.70 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=83.9
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccc
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~ 80 (190)
|.++|+|||||||+||-+.+..+.+.+++.+| ++.. ..+.++..+|...+..+ +.+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~--~~~~~~------ 64 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLG------VDIS-------RREELPDTLGLRIDQVV--DLWYAR------ 64 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCC------CCCC-------HHHHHHHhhCCCHHHHH--HHHHHh------
Confidence 45899999999999999999999999999984 4422 12445666666554422 222110
Q ss_pred ccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEE
Q 029610 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (190)
.++......+....+++.+.+. ......+|||+.++|+ ++|++++|
T Consensus 65 ---------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i 113 (222)
T PRK10826 65 ---------------------------QPWNGPSRQEVVQRIIARVISL----IEETRPLLPGVREALALCKAQGLKIGL 113 (222)
T ss_pred ---------------------------cCCCCCCHHHHHHHHHHHHHHH----HhcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence 0010111122333344444322 2345789999999999 78999999
Q ss_pred EcCCChHHHHHHH-HhCCCCch
Q 029610 158 VTTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~~~~ 178 (190)
+||+....++.++ .+|+.-.+
T Consensus 114 ~S~~~~~~~~~~l~~~~l~~~f 135 (222)
T PRK10826 114 ASASPLHMLEAVLTMFDLRDYF 135 (222)
T ss_pred EeCCcHHHHHHHHHhCcchhcc
Confidence 9999999999999 99875443
No 19
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.55 E-value=4.6e-14 Score=111.42 Aligned_cols=119 Identities=14% Similarity=0.141 Sum_probs=80.3
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+....+.+.+++.+| ++. + .+....+.|.+....+ +.+..
T Consensus 2 ~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~-~-------~~~~~~~~g~~~~~~~--~~~~~--------- 56 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAPLHAQAWKHLADKYG------IEF-D-------KQYNTSLGGLSREDIL--RAILK--------- 56 (185)
T ss_pred CeEEEcCCCcccCChHHHHHHHHHHHHHcC------CCC-C-------HHHHHHcCCCCHHHHH--HHHHH---------
Confidence 789999999999999999999999999984 431 1 1334455665544322 22211
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhc--cCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEE
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDW--SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~--g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (190)
.+ +.+++++.+....+.++|.+... ....++|||+.++|+ ++|++++|
T Consensus 57 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~i 109 (185)
T TIGR02009 57 ------------------------LRKPGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVGL 109 (185)
T ss_pred ------------------------hcCCCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEEE
Confidence 11 23444444555555555543211 234789999999998 78999999
Q ss_pred EcCCChHHHHHHH-HhCCC
Q 029610 158 VTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~ 175 (190)
+||+ ..++.++ ++|+.
T Consensus 110 ~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 110 GSSS--KNADRILAKLGLT 126 (185)
T ss_pred EeCc--hhHHHHHHHcChH
Confidence 9999 6678888 88875
No 20
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.55 E-value=5e-14 Score=111.21 Aligned_cols=125 Identities=15% Similarity=0.136 Sum_probs=81.3
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccccc
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSS 83 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~ 83 (190)
+|+|||||||+||.+....+.+.+++.+| ++.. .+..+.+.|.+....+ +.+....
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~-------- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELG------IPFD--------EEFNESLKGVSREDSL--ERILDLG-------- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCChHHHH--HHHHHhc--------
Confidence 58999999999999999999999999994 5421 2334566665554432 2221100
Q ss_pred cccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcC
Q 029610 84 VSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 160 (190)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~Tn 160 (190)
+. ..++++..+..+.+.++|.+.+.. .....+||||.++|+ ++|++++|+||
T Consensus 57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~ 111 (185)
T TIGR01990 57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA 111 (185)
T ss_pred ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence 00 123333444455555555443321 223589999999999 78999999999
Q ss_pred CChHHHHHHH-HhCCCCchH
Q 029610 161 KQMLYYESLQ-ELQYHLTEF 179 (190)
Q Consensus 161 K~~~~a~~lL-~~gl~~~~~ 179 (190)
+.. ...++ ++|+...+.
T Consensus 112 ~~~--~~~~l~~~~l~~~f~ 129 (185)
T TIGR01990 112 SKN--APTVLEKLGLIDYFD 129 (185)
T ss_pred Ccc--HHHHHHhcCcHhhCc
Confidence 754 45678 888864443
No 21
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.54 E-value=7.2e-14 Score=119.53 Aligned_cols=135 Identities=18% Similarity=0.150 Sum_probs=77.6
Q ss_pred cEEEEecCcccccCh-HHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 3 DLYALDFDGVLCDSC-GESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 3 ~lviFDlDGTLvDS~-~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
++|+|||||||+||. +.+..+.+.+++.+| +++... -...+..++. +|.|...+. +.+...
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G------~~~~~~--~~~~~~~~~~-~g~~~~~~~--~~~~~~------- 102 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEFG------LRPVEW--DVELYDELLN-IGGGKERMT--WYFNEN------- 102 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHcC------CCCCCC--CHHHHHHHHc-cCCChHHHH--HHHHHc-------
Confidence 689999999999999 888899999999994 532100 0011223444 777765432 222110
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccC-CCCCCCCHHHHHH---hCCCcEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIG-ANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~-~~~lypGv~e~L~---~~g~~laI 157 (190)
+.+.... .....+++..++....+.+.+.+.|.+.+.. ..++|||+.++|+ ++|++++|
T Consensus 103 -----~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I 165 (286)
T PLN02779 103 -----GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV 165 (286)
T ss_pred -----CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence 0000000 0000112222222222222222222222222 2589999999998 78999999
Q ss_pred EcCCChHHHHHHH-Hh
Q 029610 158 VTTKQMLYYESLQ-EL 172 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~ 172 (190)
+||++...+..++ ++
T Consensus 166 vTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 166 CSTSNEKAVSKIVNTL 181 (286)
T ss_pred EeCCCHHHHHHHHHHh
Confidence 9999999999888 66
No 22
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.52 E-value=3.2e-14 Score=114.48 Aligned_cols=130 Identities=15% Similarity=0.062 Sum_probs=80.0
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHH-------HHHHHHHHhccc
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYEN-------LLLVRLLLEIRM 76 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~-------~l~~~~l~~~~~ 76 (190)
+|+|||||||+||.+.+..+.+.+++.++ .+..+ .+.++.++|.|... ..+.+.+...
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 66 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFG------GVSVT-------HADIDHTKLAGNANNDWQLTHRLVVDGLNSA-- 66 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHc------CCCCC-------HHHHHHHHHccCccCchHHHHHHHHHhhhcc--
Confidence 68999999999999999999999999994 32221 35677788866421 0111211100
Q ss_pred ccccccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhh--hh---cccCCCCCCCCHHHHHH--
Q 029610 77 PSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKD--LT---TWIGANRFYPGIPDALK-- 149 (190)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y--~~---~~~~~~~lypGv~e~L~-- 149 (190)
. . .+ ..++...++....|++.|.... .. .......+.|++.++|+
T Consensus 67 ----------~--~---------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l 118 (197)
T TIGR01548 67 ----------S--S---------------ER-VRDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLREL 118 (197)
T ss_pred ----------c--c---------------hh-ccCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHH
Confidence 0 0 00 0011112333344555543210 00 00012345666699998
Q ss_pred -hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 150 -FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 150 -~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
++|++++|+||+++..++.+| .+|+..
T Consensus 119 ~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 147 (197)
T TIGR01548 119 HRAPKGMAVVTGRPRKDAAKFLTTHGLEI 147 (197)
T ss_pred HHcCCcEEEECCCCHHHHHHHHHHcCchh
Confidence 789999999999999999999 999863
No 23
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.52 E-value=2e-13 Score=112.70 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=82.0
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccc
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~ 80 (190)
|.++||||||||||||.+-...+...+++++| ++.. .+..+...|.+....+ +.+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~----- 59 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYG------IEIS--------DEEIRELHGGGIARII--DLLRKLA----- 59 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcC------CCCC--------HHHHHHHHCCChHHHH--HHHHHHh-----
Confidence 67999999999999999999999999999994 5432 2445555564422212 2221100
Q ss_pred ccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEE
Q 029610 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI 157 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (190)
. +....+....-..++.... ......+++|||.++|+ ++|+++++
T Consensus 60 ------~---------------------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~pGv~~~l~~L~~~~i~~av 107 (221)
T COG0637 60 ------A---------------------GEDPADLAELERLLYEAEA-----LELEGLKPIPGVVELLEQLKARGIPLAV 107 (221)
T ss_pred ------c---------------------CCcccCHHHHHHHHHHHHH-----hhhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence 0 0000000001111111111 12456789999999999 78899999
Q ss_pred EcCCChHHHHHHH-HhCCCCchHH
Q 029610 158 VTTKQMLYYESLQ-ELQYHLTEFM 180 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~~~~~~ 180 (190)
+||.++..++.+| .+|+...+..
T Consensus 108 aS~s~~~~~~~~L~~~gl~~~f~~ 131 (221)
T COG0637 108 ASSSPRRAAERVLARLGLLDYFDV 131 (221)
T ss_pred ecCChHHHHHHHHHHccChhhcch
Confidence 9999999999999 9998655544
No 24
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.52 E-value=1.1e-13 Score=109.70 Aligned_cols=120 Identities=12% Similarity=0.061 Sum_probs=77.0
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+.+..+.+.+++.+| ++.. .+.++.+.|......+ +.+....
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~------- 62 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYG------LQFD--------EQAMVALNGSPTWRIA--QAIIELN------- 62 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHHHh-------
Confidence 789999999999999999999999999984 4321 2345666676554322 2221100
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH--hCCCcEEEEcC
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTT 160 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (190)
+. ..+.+++. ..+..+|.+. ......+|||+ ++|+ .++++++|+||
T Consensus 63 ----~~--------------------~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~l~I~T~ 110 (188)
T PRK10725 63 ----QA--------------------DLDPHALA---REKTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRPMAVGTG 110 (188)
T ss_pred ----CC--------------------CCCHHHHH---HHHHHHHHHH----HhccCCCccHH-HHHHHHHhCCCEEEEcC
Confidence 00 01111111 1222223222 12346789975 7777 55699999999
Q ss_pred CChHHHHHHH-HhCCCCc
Q 029610 161 KQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 161 K~~~~a~~lL-~~gl~~~ 177 (190)
+++..+...+ ++|+...
T Consensus 111 ~~~~~~~~~l~~~~l~~~ 128 (188)
T PRK10725 111 SESAIAEALLAHLGLRRY 128 (188)
T ss_pred CchHHHHHHHHhCCcHhH
Confidence 9999999999 9998643
No 25
>PLN02940 riboflavin kinase
Probab=99.49 E-value=1.7e-13 Score=121.69 Aligned_cols=118 Identities=12% Similarity=0.025 Sum_probs=80.3
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+.+..+.+.+++++| .+.. .++++..+|.+....+ +.+..
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~G------~~~~--------~~~~~~~~G~~~~~~~--~~~~~--------- 66 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKYG------KQWD--------GREAQKIVGKTPLEAA--ATVVE--------- 66 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHH---------
Confidence 689999999999999999999999999994 4422 2446677776655432 21211
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEc
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT 159 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (190)
.++.+ ...++....+++.|.++ ....++|||+.++|+ ++|++++|+|
T Consensus 67 ------------------------~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~pGv~elL~~Lk~~g~~l~IvT 116 (382)
T PLN02940 67 ------------------------DYGLP-CSTDEFNSEITPLLSEQ-----WCNIKALPGANRLIKHLKSHGVPMALAS 116 (382)
T ss_pred ------------------------HhCCC-CCHHHHHHHHHHHHHHH-----HccCCCCcCHHHHHHHHHHCCCcEEEEe
Confidence 01111 01122233444444333 235789999999999 8999999999
Q ss_pred CCChHHHHHHH--HhCCC
Q 029610 160 TKQMLYYESLQ--ELQYH 175 (190)
Q Consensus 160 nK~~~~a~~lL--~~gl~ 175 (190)
|+++..++..+ ++|+.
T Consensus 117 n~~~~~~~~~l~~~~gl~ 134 (382)
T PLN02940 117 NSPRANIEAKISCHQGWK 134 (382)
T ss_pred CCcHHHHHHHHHhccChH
Confidence 99999988777 46663
No 26
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.46 E-value=6.2e-13 Score=108.44 Aligned_cols=123 Identities=12% Similarity=0.011 Sum_probs=80.3
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+.+..+.+.+++..| ++... .+..+.+.|......+ +.+..
T Consensus 5 ~~viFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~~~--------- 60 (221)
T PRK10563 5 EAVFFDCDGTLVDSEVICSRAYVTMFAEFG------ITLSL-------EEVFKRFKGVKLYEII--DIISK--------- 60 (221)
T ss_pred CEEEECCCCCCCCChHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH--HHHHH---------
Confidence 899999999999999998999999999884 44211 1223445555443322 22211
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHHhCCCcEEEEcCCC
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQ 162 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~ 162 (190)
.+|.+. ..++....|++.+...+ ....++|||+.++|+.-+++++|+||++
T Consensus 61 ------------------------~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivTn~~ 111 (221)
T PRK10563 61 ------------------------EHGVTL-AKAELEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVSNGP 111 (221)
T ss_pred ------------------------HhCCCC-CHHHHHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEeCCc
Confidence 112211 01122233444433222 3457899999999995579999999999
Q ss_pred hHHHHHHH-HhCCCCch
Q 029610 163 MLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 163 ~~~a~~lL-~~gl~~~~ 178 (190)
...+...| .+|+...+
T Consensus 112 ~~~~~~~l~~~~l~~~F 128 (221)
T PRK10563 112 VSKMQHSLGKTGMLHYF 128 (221)
T ss_pred HHHHHHHHHhcChHHhC
Confidence 99999999 99986544
No 27
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.44 E-value=4.6e-13 Score=107.73 Aligned_cols=133 Identities=14% Similarity=0.136 Sum_probs=76.1
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhh-hccc------cccChHHHHHHHHHHhcc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHI-LRPV------VETGYENLLLVRLLLEIR 75 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~-ir~~------Ig~G~~~~l~~~~l~~~~ 75 (190)
++|+|||||||+||.+.+..+.+.+++++| ++.. +.++...+.. .+.. .|.+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 59 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYG------VEVS-PDELEQAFRRAFKAMSEAFPNFGFS-------------- 59 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhC------CCCC-HHHHHHHHHHHHHHHHhhCCCCCCC--------------
Confidence 689999999999999999999999999994 5432 1111111110 1110 0000
Q ss_pred cccccccccccCcchhhHhhhhhhhhhhhhhhccC-ChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hC
Q 029610 76 MPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE-NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FA 151 (190)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~-~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~ 151 (190)
.+.+..++ |.......+...|. +.+.+.+.+..++.+|.. ....++|||+.++|+ ++
T Consensus 60 ----------~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~l~~L~~~ 120 (203)
T TIGR02252 60 ----------SGLTPQQW---WQKLVRDTFGRAGVPDPESFEKIFEELYSYFAT------PEPWQVYPDAIKLLKDLRER 120 (203)
T ss_pred ----------CCCCHHHH---HHHHHHHHHHhcCCCCchhHHHHHHHHHHHhcC------CCcceeCcCHHHHHHHHHHC
Confidence 01111100 11111112222222 223344455555544421 123579999999999 68
Q ss_pred CCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 152 SSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 152 g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
|++++|+||++.. +...+ ++|+..
T Consensus 121 g~~~~i~Sn~~~~-~~~~l~~~~l~~ 145 (203)
T TIGR02252 121 GLILGVISNFDSR-LRGLLEALGLLE 145 (203)
T ss_pred CCEEEEEeCCchh-HHHHHHHCCcHH
Confidence 9999999999875 47788 888743
No 28
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.43 E-value=2.9e-13 Score=109.98 Aligned_cols=40 Identities=25% Similarity=0.206 Sum_probs=36.0
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..++|||+.++|+ ++|++++|+||++...+...+ ++|+..
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~ 135 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD 135 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH
Confidence 4689999999999 789999999999999999999 998854
No 29
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.40 E-value=8.4e-13 Score=109.66 Aligned_cols=128 Identities=13% Similarity=0.033 Sum_probs=69.5
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+.+..+.+.+++.++...+ ++.... ....+.++..++.......
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~---------------- 69 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQ----NEDLQRLRQALREAEPEIY---------------- 69 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCC----HHHHHHHHHHHHHhCchhh----------------
Confidence 7899999999999999999999988877621100 010000 0011222222211111000
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH--hCCCcEEEEcC
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTT 160 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (190)
.+.. .-.......+++.+|.+.+..+...+.+...|.. +.....+|||+.++|+ +++++++|+||
T Consensus 70 -----~~~~---~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn 136 (238)
T PRK10748 70 -----HDVT---RWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN 136 (238)
T ss_pred -----CcHH---HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence 0000 0001122334455666554433333333333321 2345789999999999 66799999999
Q ss_pred CChH
Q 029610 161 KQML 164 (190)
Q Consensus 161 K~~~ 164 (190)
++..
T Consensus 137 ~~~~ 140 (238)
T PRK10748 137 GNAQ 140 (238)
T ss_pred CCch
Confidence 8865
No 30
>PRK09449 dUMP phosphatase; Provisional
Probab=99.39 E-value=1.1e-12 Score=106.95 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=35.9
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..++|||+.++|+ ++|++++|+||++...++..+ ++|+..
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~ 135 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD 135 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH
Confidence 4679999999999 778999999999999999999 988754
No 31
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.39 E-value=1.1e-12 Score=105.26 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=68.6
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccc
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~ 80 (190)
|.++|+|||||||+|+.. +++.+++++ |++. ++++..+|.+....+ ...
T Consensus 1 m~k~viFDlDGTLiD~~~----~~~~~~~~~------g~~~----------~~~~~~~g~~~~~~~-~~~---------- 49 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQS----GLPYFAQKY------NIPT----------DHILKMIQDERFRDP-GEL---------- 49 (197)
T ss_pred CCcEEEEecCCceEchhh----ccHHHHHhc------CCCH----------HHHHHHHhHhhhcCH-HHH----------
Confidence 889999999999999554 556777877 4431 344555664422211 010
Q ss_pred ccccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH--hCCCcEEEE
Q 029610 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIV 158 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~--~~g~~laI~ 158 (190)
++.++++..+.+..|+.. .+....++|||+.++|+ +++++++++
T Consensus 50 ---------------------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~pG~~e~L~~L~~~~~~~i~ 95 (197)
T PHA02597 50 ---------------------------FGCDQELAKKLIEKYNNS-------DFIRYLSAYDDALDVINKLKEDYDFVAV 95 (197)
T ss_pred ---------------------------hcccHHHHHHHhhhhhHH-------HHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence 111222333444444421 22345779999999999 445678999
Q ss_pred cCCChHHHHHHH-HhCCC
Q 029610 159 TTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 159 TnK~~~~a~~lL-~~gl~ 175 (190)
||++......++ ++++.
T Consensus 96 Tn~~~~~~~~~~~~~~l~ 113 (197)
T PHA02597 96 TALGDSIDALLNRQFNLN 113 (197)
T ss_pred eCCccchhHHHHhhCCHH
Confidence 999877776677 77664
No 32
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.38 E-value=7.5e-13 Score=105.17 Aligned_cols=41 Identities=15% Similarity=-0.012 Sum_probs=34.9
Q ss_pred CCCCCCCHHHHHHhCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 137 ANRFYPGIPDALKFASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
..++|||+.++|+.-.++++|+||++...+...+ ++|+...
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~ 123 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDC 123 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhh
Confidence 4679999999999333689999999999999999 9998543
No 33
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.36 E-value=6.5e-12 Score=123.89 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=81.5
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
++|+|||||||+||.+.+..+.+.+++++| ++.. .+.++.++|.+...++ +.+..
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~it--------~e~~~~~~G~~~~~~~--~~~~~--------- 130 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEMG------VEVT--------VEDFVPFMGTGEANFL--GGVAS--------- 130 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHcC------CCCC--------HHHHHHHhCCCHHHHH--HHHHH---------
Confidence 789999999999999999999999999984 5421 2445667776654432 22211
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEc
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT 159 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (190)
.++++....++..+.+.+.|.++|... ....+|||+.++|+ ++|++++|+|
T Consensus 131 ------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvS 184 (1057)
T PLN02919 131 ------------------------VKGVKGFDPDAAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVAS 184 (1057)
T ss_pred ------------------------hcCCCCCCHHHHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEe
Confidence 001100001112233333443333221 12358999999999 8899999999
Q ss_pred CCChHHHHHHH-HhCCC
Q 029610 160 TKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 160 nK~~~~a~~lL-~~gl~ 175 (190)
|+....++.+| ++|+.
T Consensus 185 n~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 185 SADRIKVDANLAAAGLP 201 (1057)
T ss_pred CCcHHHHHHHHHHcCCC
Confidence 99999999999 99985
No 34
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.32 E-value=7.8e-12 Score=101.33 Aligned_cols=43 Identities=16% Similarity=0.043 Sum_probs=36.7
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCchHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTEFM 180 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~~~ 180 (190)
..++|||+.++|+ ++ ++++|+||++...+..++ .+|+...+..
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~ 141 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDD 141 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCE
Confidence 4689999999999 55 999999999999999999 9998654433
No 35
>PLN02954 phosphoserine phosphatase
Probab=99.27 E-value=5e-11 Score=97.24 Aligned_cols=38 Identities=24% Similarity=0.396 Sum_probs=35.7
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
.++|||+.++|+ ++|++++|+||+.+..++.++ ++|+.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 579999999999 889999999999999999999 99985
No 36
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.23 E-value=2.5e-11 Score=101.65 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=38.2
Q ss_pred ccCCCCCCCCHHHHHH---hCCCcEEEEcCC----ChHHHHHHH-HhCCCCc
Q 029610 134 WIGANRFYPGIPDALK---FASSRIYIVTTK----QMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK----~~~~a~~lL-~~gl~~~ 177 (190)
+...+.++||+.++|+ ++|++++||||| ++..++.++ ++|+...
T Consensus 109 ~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~ 160 (237)
T TIGR01672 109 WDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM 160 (237)
T ss_pred cccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh
Confidence 3456789999999999 899999999998 788999999 9999643
No 37
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.21 E-value=8.3e-12 Score=95.96 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=72.5
Q ss_pred EEEecCcccccChHHHHHHHHH-HHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccccc
Q 029610 5 YALDFDGVLCDSCGESSLSAVK-AAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSS 83 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a~~~-a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~ 83 (190)
|+||+||||+|+...+..+... +++.++ .+ . ..+.++...+.+....+ ..+.
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~------~~-~-------~~~~~~~~~~~~~~~~~--~~~~----------- 53 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFG------LE-I-------SAEELRELFGKSYEEAL--ERLL----------- 53 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTT------HH-H-------HHHHHHHHTTSHHHHHH--HHHH-----------
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhC------CC-C-------CHHHHHHHhCCCHHHHH--HHhh-----------
Confidence 7999999999999988888876 466663 33 1 13444444444443322 1111
Q ss_pred cccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcC
Q 029610 84 VSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 160 (190)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~Tn 160 (190)
..++.+...+.+.+.++ . .....++|||+.++|+ ++|++++|+||
T Consensus 54 ----------------------~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn 101 (176)
T PF13419_consen 54 ----------------------ERFGIDPEEIQELFREY---N-------LESKLQPYPGVRELLERLKAKGIPLVIVSN 101 (176)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHH---H-------HHGGEEESTTHHHHHHHHHHTTSEEEEEES
T ss_pred ----------------------hccchhHHHHHHHhhhh---h-------hhhccchhhhhhhhhhhcccccceeEEeec
Confidence 11111112222222222 1 1235689999999999 69999999999
Q ss_pred CChHHHHHHH-HhCCC
Q 029610 161 KQMLYYESLQ-ELQYH 175 (190)
Q Consensus 161 K~~~~a~~lL-~~gl~ 175 (190)
.+...++..+ ++|+.
T Consensus 102 ~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 102 GSRERIERVLERLGLD 117 (176)
T ss_dssp SEHHHHHHHHHHTTHG
T ss_pred CCcccccccccccccc
Confidence 9999999999 99887
No 38
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.20 E-value=8.4e-11 Score=94.30 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=36.7
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCch
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~ 178 (190)
..++|||+.++|+ ++|++++|+||.+...++.++ ++|+.-.+
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f 135 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF 135 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh
Confidence 3579999999999 779999999999999999999 99985333
No 39
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.18 E-value=7.1e-11 Score=90.89 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=31.9
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-Hh
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-EL 172 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~ 172 (190)
...++||+.++|+ ++|++++|+||+++..+..++ ++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3457899999999 789999999999999999988 74
No 40
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.17 E-value=7.4e-11 Score=94.05 Aligned_cols=40 Identities=10% Similarity=0.024 Sum_probs=36.4
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..++|||+.++|+ ++|++++|+||+....++.++ ++|+..
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~ 121 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY 121 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe
Confidence 4579999999999 789999999999999999999 999754
No 41
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.16 E-value=4.4e-11 Score=96.86 Aligned_cols=29 Identities=14% Similarity=0.126 Sum_probs=25.2
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLY 165 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~ 165 (190)
..++|||+.++|+ ++|++++|+||++...
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~ 123 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTD 123 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 5789999999999 7899999999987543
No 42
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.16 E-value=6.6e-11 Score=96.93 Aligned_cols=37 Identities=14% Similarity=0.207 Sum_probs=34.3
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
+.++|||+.++|+ ++|++++|+||+....++.+| ++ +
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-C
Confidence 4689999999999 899999999999999999999 87 5
No 43
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.14 E-value=5.2e-10 Score=91.79 Aligned_cols=58 Identities=16% Similarity=0.290 Sum_probs=48.2
Q ss_pred cCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH----hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK----FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~----~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
|.+.+++++..+.|++.|.+ .+.+|||+.++|+ ++|++++|||||++..++.+. ..++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~ 134 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNF 134 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccc
Confidence 67788888888888877643 2578999999994 479999999999999999999 7554
No 44
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.12 E-value=2.2e-10 Score=89.97 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=35.5
Q ss_pred CCCCCCCHHHHHHhCCCcEEEEcCCChHHHHHHH-HhCCCCchHHH
Q 029610 137 ANRFYPGIPDALKFASSRIYIVTTKQMLYYESLQ-ELQYHLTEFMV 181 (190)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~lL-~~gl~~~~~~v 181 (190)
...+|||+.++|+ +++|+||++.......+ ++|+...+..|
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v 129 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRA 129 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhh
Confidence 4579999999996 58999999999999999 99987766554
No 45
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.10 E-value=7.1e-10 Score=91.49 Aligned_cols=41 Identities=7% Similarity=-0.068 Sum_probs=36.7
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
...++|||+.++|+ ++|++++|+||++...++..+ ++|+..
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~ 134 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA 134 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH
Confidence 45789999999999 789999999999999999999 888743
No 46
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.07 E-value=7.8e-10 Score=88.90 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=35.1
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
...++|||+.++|+ ++ ++++|+||+....++.++ ++|+.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 35679999999999 55 999999999999999999 99975
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.05 E-value=1.5e-09 Score=88.16 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=35.8
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..+++||+.++|+ ++|++++|+||.....+..++ .+|++.
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~ 126 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA 126 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 3579999999999 789999999999999999999 998753
No 48
>PLN02811 hydrolase
Probab=99.01 E-value=2.7e-09 Score=87.34 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=66.1
Q ss_pred cCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccccccccCc
Q 029610 9 FDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGL 88 (190)
Q Consensus 9 lDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~~~~~~ 88 (190)
|||||+||.+.+..+.+.+++.+| ++. + .+.++.++|.+....+ +.+.+.. +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~G~~~~~~~--~~~~~~~-----------~~ 53 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYG------KTF-D-------WSLKAKMMGKKAIEAA--RIFVEES-----------GL 53 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcC------CCC-C-------HHHHHHccCCCHHHHH--HHHHHHh-----------CC
Confidence 799999999999999999999994 542 1 2456778887765433 2222100 00
Q ss_pred chhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCCChHH
Q 029610 89 TVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQMLY 165 (190)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~ 165 (190)
+. ..+.+++.+ ++..+...+ .....+||||.++|+ ++|++++|+||++...
T Consensus 54 ~~------------------~~~~~~~~~----~~~~~~~~~----~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 54 SD------------------SLSPEDFLV----EREAMLQDL----FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CC------------------CCCHHHHHH----HHHHHHHHH----HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 00 001111111 122221111 234689999999999 8899999999998764
Q ss_pred HHH
Q 029610 166 YES 168 (190)
Q Consensus 166 a~~ 168 (190)
...
T Consensus 108 ~~~ 110 (220)
T PLN02811 108 FDL 110 (220)
T ss_pred HHH
Confidence 443
No 49
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.87 E-value=7.4e-09 Score=81.52 Aligned_cols=40 Identities=5% Similarity=0.145 Sum_probs=36.2
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
.+++||+.++|+ ++|++++|+||+....++.++ ++|+...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~ 114 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV 114 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh
Confidence 589999999999 789999999999999999999 9988543
No 50
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.83 E-value=2.4e-08 Score=81.61 Aligned_cols=40 Identities=10% Similarity=0.148 Sum_probs=35.1
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..++|||+.++|+ +++.+++|+||+....++.++ ++|++.
T Consensus 66 ~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~ 108 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT 108 (203)
T ss_pred hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch
Confidence 3579999999999 444699999999999999999 999874
No 51
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.82 E-value=1.5e-08 Score=79.27 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=32.2
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
.++|||+.++|+ ++|++++|+||.+... ..++ ++|+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 689999999999 7899999999999988 6666 68774
No 52
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.78 E-value=1.1e-07 Score=76.46 Aligned_cols=32 Identities=9% Similarity=0.149 Sum_probs=27.7
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ 170 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL 170 (190)
.+|||+.++|+ ++|++++|+||++......++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~ 118 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHH
Confidence 58999999999 789999999999987765544
No 53
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.73 E-value=1.1e-07 Score=78.26 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=37.8
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCch
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~ 178 (190)
.+++||+.++++ ++|++++|+|+-+..+++++. .+|++...
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~ 120 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVV 120 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchhe
Confidence 689999999999 899999999999999999999 99987543
No 54
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.68 E-value=1.2e-07 Score=75.93 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=47.4
Q ss_pred cCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
|.+.+++.+..+.+.+.+. ...+|||+.++|+ ++|++++|+|++++..++.++ ++|++-
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~ 128 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN 128 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc
Confidence 6777777766665544321 2468999999998 789999999999999999999 999863
No 55
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=98.67 E-value=3.1e-07 Score=76.27 Aligned_cols=116 Identities=11% Similarity=0.082 Sum_probs=77.2
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhccccccccc
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~ 82 (190)
.+++||+||||+||-..+..+.+.-+..+| .+. ..+......|.+...++ +.+... .
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~yg------k~~--------~~~~~~~~mG~~~~eaa--~~~~~~-~------ 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYG------KPY--------PWDVKVKSMGKRTSEAA--RLFVKK-L------ 67 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcC------CCC--------hHHHHHHHcCCCHHHHH--HHHHhh-c------
Confidence 579999999999999999999999999995 322 13444557887766644 444310 0
Q ss_pred ccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEc
Q 029610 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT 159 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (190)
.+..+.+ ++......-... ......+.||+.++++ .+|++++++|
T Consensus 68 --~dp~s~e----------------------e~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gip~alat 115 (222)
T KOG2914|consen 68 --PDPVSRE----------------------EFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGIPVALAT 115 (222)
T ss_pred --CCCCCHH----------------------HHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence 0011222 221111111111 2356889999999999 8899999999
Q ss_pred CCChHHHHHHH-HhC
Q 029610 160 TKQMLYYESLQ-ELQ 173 (190)
Q Consensus 160 nK~~~~a~~lL-~~g 173 (190)
|-++...+.-+ +++
T Consensus 116 ~s~~~~~~~k~~~~~ 130 (222)
T KOG2914|consen 116 SSTSASFELKISRHE 130 (222)
T ss_pred cCCcccHHHHHHHhh
Confidence 99888887777 554
No 56
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.59 E-value=1.6e-07 Score=73.40 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=35.7
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..+++||+.++|+ ++|++++|+|+.....++.++ ++|+.
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 3568999999999 889999999999999999999 99885
No 57
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.58 E-value=4.8e-07 Score=73.42 Aligned_cols=45 Identities=22% Similarity=-0.006 Sum_probs=36.1
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCCCCchHHH
Q 029610 137 ANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQYHLTEFMV 181 (190)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl~~~~~~v 181 (190)
..++||++.+.|+ ++.++++|+||-........+ .+|+...+..|
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v 144 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAV 144 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheE
Confidence 4689999999999 333889999998888888888 98876555444
No 58
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.53 E-value=7.5e-07 Score=77.76 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=36.1
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..+++||+.++|+ ++|++++|+||....+++.++ ++|++.
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~ 222 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA 222 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe
Confidence 3679999999999 889999999999999999999 999853
No 59
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.50 E-value=1.4e-06 Score=71.09 Aligned_cols=38 Identities=8% Similarity=0.134 Sum_probs=34.3
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
...++||+.++|+ ++|++++|+||+....++.++ +++.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCC
Confidence 3689999999999 789999999999999999999 8754
No 60
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.46 E-value=1.6e-07 Score=78.76 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=36.2
Q ss_pred cccCCCCCCCCHHHHHH---hCCCcEEEEcC----CChHHHHHHH-HhCC
Q 029610 133 TWIGANRFYPGIPDALK---FASSRIYIVTT----KQMLYYESLQ-ELQY 174 (190)
Q Consensus 133 ~~~~~~~lypGv~e~L~---~~g~~laI~Tn----K~~~~a~~lL-~~gl 174 (190)
++...+.||||+.++|+ ++|++++++|| |.+..++.++ ++|+
T Consensus 108 ~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 108 GWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 34566899999999999 89999999999 4577888888 8999
No 61
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.46 E-value=4.1e-07 Score=68.45 Aligned_cols=38 Identities=32% Similarity=0.364 Sum_probs=34.1
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCC--------hHHHHHHH-HhCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQ--------MLYYESLQ-ELQYH 175 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~--------~~~a~~lL-~~gl~ 175 (190)
.++|||+.++|+ ++|++++|+||++ ...+..++ ++|+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 368999999998 7899999999999 88899999 98886
No 62
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.45 E-value=1.9e-07 Score=74.89 Aligned_cols=40 Identities=8% Similarity=0.022 Sum_probs=36.2
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCC-ChHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTK-QMLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~lL-~~gl~ 175 (190)
....+||||.++|+ ++|++++|+||+ +...+..++ .+|+.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 35689999999999 799999999999 899999999 99986
No 63
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.38 E-value=1.5e-06 Score=72.82 Aligned_cols=47 Identities=11% Similarity=0.193 Sum_probs=40.0
Q ss_pred CCCCCCCCHHHHHH-----hCCCcEEEEcCCChHHHHHHH-HhCCCCchHHHH
Q 029610 136 GANRFYPGIPDALK-----FASSRIYIVTTKQMLYYESLQ-ELQYHLTEFMVW 182 (190)
Q Consensus 136 ~~~~lypGv~e~L~-----~~g~~laI~TnK~~~~a~~lL-~~gl~~~~~~v~ 182 (190)
...++-||+.++++ +.|+.+.|+|.-..-+++.+| +.|+.-.+..|+
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~ 120 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIF 120 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEE
Confidence 35688999999999 369999999999999999999 999976655443
No 64
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=98.08 E-value=5.5e-05 Score=62.69 Aligned_cols=38 Identities=18% Similarity=0.249 Sum_probs=33.7
Q ss_pred cCCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-Hh
Q 029610 135 IGANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-EL 172 (190)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~ 172 (190)
.....+|||+.++|+ ++|++++|+||++....+.++ ++
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 446789999999999 889999999999999888887 75
No 65
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.01 E-value=1.3e-05 Score=63.90 Aligned_cols=40 Identities=20% Similarity=0.240 Sum_probs=36.4
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
...+++||+.++|+ ++|++++|+|+-....+..+. .+||.
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~ 167 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF 167 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc
Confidence 34578999999999 889999999999999999999 99994
No 66
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.99 E-value=7.4e-06 Score=65.06 Aligned_cols=26 Identities=23% Similarity=0.210 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCCh
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQM 163 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~ 163 (190)
..+|||+.++|+ ++|++++|+||++.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~ 56 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSG 56 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 358999999999 78999999999973
No 67
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.93 E-value=8.8e-05 Score=61.57 Aligned_cols=115 Identities=17% Similarity=0.235 Sum_probs=76.2
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccc
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~ 81 (190)
..+++||||-||+|-=.+-+.+- .+ |.. ..+.++|+.+.+|.=.-++.|.+-..
T Consensus 13 ril~~FDFD~TIid~dSD~wVv~-----~l--------p~~------~l~~qL~~t~p~~~Wne~M~rv~k~L------- 66 (256)
T KOG3120|consen 13 RILLVFDFDRTIIDQDSDNWVVD-----EL--------PTT------DLFNQLRDTYPKGFWNELMDRVFKEL------- 66 (256)
T ss_pred cEEEEEecCceeecCCcchHHHH-----hc--------ccc------hhHHHHHHhcccchHHHHHHHHHHHH-------
Confidence 36899999999999877755443 22 211 13567787777553333445555321
Q ss_pred cccccCcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCC-CcEEE
Q 029610 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FAS-SRIYI 157 (190)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g-~~laI 157 (190)
.+.|.+.+++ ++.+ ...+.-||+.++++ +.| +.+.|
T Consensus 67 ------------------------heqgv~~~~i-------k~~~---------r~iP~~Pgmv~lik~~ak~g~~eliI 106 (256)
T KOG3120|consen 67 ------------------------HEQGVRIAEI-------KQVL---------RSIPIVPGMVRLIKSAAKLGCFELII 106 (256)
T ss_pred ------------------------HHcCCCHHHH-------HHHH---------hcCCCCccHHHHHHHHHhCCCceEEE
Confidence 0113333322 2222 23577899999999 556 49999
Q ss_pred EcCCChHHHHHHH-HhCCCCchHHHH
Q 029610 158 VTTKQMLYYESLQ-ELQYHLTEFMVW 182 (190)
Q Consensus 158 ~TnK~~~~a~~lL-~~gl~~~~~~v~ 182 (190)
+|-...-|++.+| ++|++--|..||
T Consensus 107 VSDaNsfFIe~~Lea~~~~d~F~~If 132 (256)
T KOG3120|consen 107 VSDANSFFIEEILEAAGIHDLFSEIF 132 (256)
T ss_pred EecCchhHHHHHHHHccHHHHHHHHh
Confidence 9999999999999 999988777776
No 68
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.88 E-value=3.9e-05 Score=65.44 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=34.1
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCCh---HHHHHHH-HhCCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQM---LYYESLQ-ELQYHL 176 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~---~~a~~lL-~~gl~~ 176 (190)
....++||+.++|+ ++|++++|+||+++ ..+...| .+|+..
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~ 162 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQ 162 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCC
Confidence 35679999999999 89999999999884 4455788 888864
No 69
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.85 E-value=0.00011 Score=57.87 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=30.7
Q ss_pred CCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 142 PGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
|++.++|+ ++|+++.|+|+.+...++.++ .+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 44449998 789999999999999999999 999864
No 70
>PRK08238 hypothetical protein; Validated
Probab=97.83 E-value=0.00017 Score=66.33 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=34.4
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
.+++||+.+.|+ ++|++++|+||+++..++.++ ++|+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 357799999999 899999999999999999999 9997
No 71
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.23 E-value=0.00025 Score=58.94 Aligned_cols=46 Identities=20% Similarity=0.314 Sum_probs=38.8
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHH--HHH-HhCCCC-chHHH
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYE--SLQ-ELQYHL-TEFMV 181 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~--~lL-~~gl~~-~~~~v 181 (190)
...++|||+.++|+ ++|++++|+|||++.... ..| ++|+.. .+..|
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~I 73 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMI 73 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceE
Confidence 35689999999999 789999999999998776 788 999986 55444
No 72
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.23 E-value=0.00025 Score=55.94 Aligned_cols=40 Identities=20% Similarity=0.120 Sum_probs=34.5
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCC---------------hHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQ---------------MLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~---------------~~~a~~lL-~~gl~ 175 (190)
...++||||.++|+ ++|++++|+|||+ ...+..++ ++|+.
T Consensus 26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 84 (161)
T TIGR01261 26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII 84 (161)
T ss_pred HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc
Confidence 34689999999999 7899999999984 66788888 88887
No 73
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.20 E-value=0.0014 Score=52.49 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=20.6
Q ss_pred ccCCCCCCCCHHHHHH---hCCCcEEEEcCCChH
Q 029610 134 WIGANRFYPGIPDALK---FASSRIYIVTTKQML 164 (190)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~ 164 (190)
.....+|+||+.|+|+ +.|..+.++|+.+..
T Consensus 68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 68 FFSNLPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp TTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 3456789999999999 778777777776543
No 74
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.14 E-value=0.00052 Score=54.31 Aligned_cols=38 Identities=26% Similarity=0.414 Sum_probs=32.6
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChH------------HHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQML------------YYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~------------~a~~lL-~~gl~~ 176 (190)
.+||||.++|+ ++|++++|+|||+.. .+..++ ++|+..
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~ 95 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI 95 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE
Confidence 47999999999 889999999999974 567888 988753
No 75
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.04 E-value=0.00045 Score=52.17 Aligned_cols=35 Identities=11% Similarity=-0.031 Sum_probs=32.4
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCC-ChHHHHHHH-HhC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTK-QMLYYESLQ-ELQ 173 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~lL-~~g 173 (190)
++|||+.++|+ ++|++++|+||+ +...+..++ +++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999 789999999999 899998988 877
No 76
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.02 E-value=0.0007 Score=52.27 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=35.9
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 137 ANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
...++||+.++|+ .++++++|+||+++..++.++ ++++.
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 4678999999999 778999999999999999999 99884
No 77
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.02 E-value=0.0023 Score=53.77 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=33.5
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCchHHHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTEFMVW 182 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~~~v~ 182 (190)
...+.+|+.++|+ ++|..++|+||=..+.= .++ .+|+.--++.|.
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv 159 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVV 159 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhh
Confidence 4567899999999 88999999999886644 666 777754444443
No 78
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.93 E-value=0.0011 Score=50.93 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=32.4
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCCh---------------HHHHHHH-HhCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQM---------------LYYESLQ-ELQYH 175 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~lL-~~gl~ 175 (190)
.++|||+.++|+ ++|++++|+||+++ ..+..++ ++|+.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 368999999999 89999999999984 5677788 88874
No 79
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.91 E-value=0.00054 Score=55.76 Aligned_cols=30 Identities=33% Similarity=0.407 Sum_probs=24.0
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
.|+|+||+||||+|+-..+......+++++
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l 32 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKA 32 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHH
Confidence 599999999999998766666666666665
No 80
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.88 E-value=0.00059 Score=57.31 Aligned_cols=31 Identities=26% Similarity=0.204 Sum_probs=24.5
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|.|+|+||+||||+++-..|......+++++
T Consensus 1 m~kli~~DlDGTLl~~~~~i~~~~~~ai~~l 31 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDHHLGEKTLSTLARL 31 (272)
T ss_pred CccEEEEeCCCcCcCCCCcCCHHHHHHHHHH
Confidence 7899999999999998666666665566655
No 81
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.87 E-value=0.0014 Score=51.81 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=23.9
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCCh
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQM 163 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~ 163 (190)
.++|||+.++|+ ++|++++|+|||+.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 468999999999 89999999999995
No 82
>PRK10976 putative hydrolase; Provisional
Probab=96.84 E-value=0.00065 Score=56.74 Aligned_cols=31 Identities=29% Similarity=0.224 Sum_probs=24.5
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|.|+|++|+||||+|+-..+......+++++
T Consensus 1 mikli~~DlDGTLl~~~~~is~~~~~ai~~l 31 (266)
T PRK10976 1 MYQVVASDLDGTLLSPDHTLSPYAKETLKLL 31 (266)
T ss_pred CceEEEEeCCCCCcCCCCcCCHHHHHHHHHH
Confidence 7799999999999998766666666666655
No 83
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=96.82 E-value=0.0013 Score=51.75 Aligned_cols=40 Identities=13% Similarity=0.106 Sum_probs=36.5
Q ss_pred CCCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..+++|||+.++|+ ++++.++|+|||++..|..++ .++..
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35789999999999 777999999999999999999 99876
No 84
>PTZ00174 phosphomannomutase; Provisional
Probab=96.81 E-value=0.00067 Score=56.64 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=25.5
Q ss_pred CC-cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MA-DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~-~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+ |+|+||+||||+|+-..+......+++.+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l 34 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKL 34 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHH
Confidence 44 89999999999999877777766676666
No 85
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.68 E-value=0.023 Score=52.61 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=40.9
Q ss_pred cCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHHhCCCcEEEEcCCChHHHHHHH-H-hCCC
Q 029610 109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQMLYYESLQ-E-LQYH 175 (190)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~lL-~-~gl~ 175 (190)
|.+.+++++...++...|... .++|.+.+.++++|.. +|+|.-++..++.++ . +|++
T Consensus 89 G~~~~el~~~~r~~l~~f~~~---------~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYAE---------DVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHHH---------hcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC
Confidence 667777766655555544321 2678777777766654 999999999999999 6 7887
No 86
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.63 E-value=0.0012 Score=55.11 Aligned_cols=31 Identities=23% Similarity=0.191 Sum_probs=23.4
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|.|+|+||+||||+|+-..+......+++++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~ 32 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARA 32 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHH
Confidence 1599999999999998766666555566555
No 87
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.56 E-value=0.0014 Score=54.81 Aligned_cols=30 Identities=27% Similarity=0.222 Sum_probs=23.6
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
.|+|+||+||||+++-..+......+++++
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l 32 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAA 32 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHH
Confidence 499999999999998766666666666665
No 88
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.52 E-value=0.003 Score=55.99 Aligned_cols=42 Identities=19% Similarity=0.175 Sum_probs=35.3
Q ss_pred ccCCCCCCCCHHHHHH---hCCCcEEEEcCC---------------ChHHHHHHH-HhCCC
Q 029610 134 WIGANRFYPGIPDALK---FASSRIYIVTTK---------------QMLYYESLQ-ELQYH 175 (190)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~lL-~~gl~ 175 (190)
.....++||||.++|+ ++|++++|+||| +...+..++ .+|+.
T Consensus 25 ~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~ 85 (354)
T PRK05446 25 SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK 85 (354)
T ss_pred CcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc
Confidence 3556899999999999 789999999997 466777888 88875
No 89
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.46 E-value=0.033 Score=45.69 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=37.5
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
...++=|||+|+.. ++|.+++++|+--+.++..+- .+||+.
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 46788899999998 999999999999999999999 999865
No 90
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=96.42 E-value=0.005 Score=44.44 Aligned_cols=45 Identities=27% Similarity=0.216 Sum_probs=38.9
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCchHHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTEFMV 181 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~~~v 181 (190)
..+++||+.++|+ ++|++++|+||.....++..+ .+|+..++..+
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i 70 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV 70 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhhe
Confidence 4689999999999 779999999999999999999 99886555444
No 91
>PRK06769 hypothetical protein; Validated
Probab=96.41 E-value=0.0041 Score=49.24 Aligned_cols=26 Identities=15% Similarity=0.227 Sum_probs=23.7
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCCh
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQM 163 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~ 163 (190)
.++||||.++|+ ++|++++|+||++.
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 468999999999 78999999999985
No 92
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.39 E-value=0.002 Score=54.33 Aligned_cols=31 Identities=35% Similarity=0.210 Sum_probs=22.0
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|.|+|++|+||||+|+-..+...+..+++.+
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l 33 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKAL 33 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHH
Confidence 7799999999999995444444444455554
No 93
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.35 E-value=0.012 Score=49.14 Aligned_cols=40 Identities=8% Similarity=-0.035 Sum_probs=34.1
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHH---HHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLY---YESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~lL-~~gl~~ 176 (190)
..++.||+.++++ ++|+++.++|+.++.. +..-| ..|++.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~ 164 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG 164 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC
Confidence 5678899999999 8899999999999777 77777 888763
No 94
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.31 E-value=0.0025 Score=51.67 Aligned_cols=29 Identities=31% Similarity=0.386 Sum_probs=23.3
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+|+||+||||+|+-..+......+++++
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l 30 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKA 30 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHH
Confidence 78999999999998766666666666666
No 95
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.31 E-value=0.0023 Score=53.44 Aligned_cols=31 Identities=35% Similarity=0.343 Sum_probs=27.0
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|.++|+||+||||+++-..+...+..+++.+
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~ 32 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARL 32 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHH
Confidence 4599999999999999998888888887755
No 96
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.20 E-value=0.0024 Score=51.69 Aligned_cols=27 Identities=33% Similarity=0.351 Sum_probs=21.8
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHh
Q 029610 5 YALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+||+||||+|+-..+......+++++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l 27 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKA 27 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHH
Confidence 689999999999877777766677764
No 97
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.18 E-value=0.0064 Score=51.67 Aligned_cols=44 Identities=16% Similarity=0.011 Sum_probs=38.1
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC-chHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL-TEFM 180 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~-~~~~ 180 (190)
...+|||+.++|+ ++|++++|+|||+...++.++ ++++.- .+..
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~ 233 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD 233 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh
Confidence 3579999999999 889999999999999999999 998873 4433
No 98
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.10 E-value=0.031 Score=48.01 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=37.8
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCch
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~ 178 (190)
..++.||+.++|+ ++|++++|+|+.....++.+| ++|+..+.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 5789999999999 899999999999999999999 99985443
No 99
>PLN02423 phosphomannomutase
Probab=96.09 E-value=0.0034 Score=52.56 Aligned_cols=29 Identities=21% Similarity=0.202 Sum_probs=23.6
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
.+++||+||||+|+-..+......+++++
T Consensus 8 ~i~~~D~DGTLl~~~~~i~~~~~~ai~~l 36 (245)
T PLN02423 8 VIALFDVDGTLTAPRKEATPEMLEFMKEL 36 (245)
T ss_pred eEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence 35569999999999888877777777777
No 100
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=96.08 E-value=0.0029 Score=55.88 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=34.7
Q ss_pred cCCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-Hh-C
Q 029610 135 IGANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-EL-Q 173 (190)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~-g 173 (190)
.....++||+.++|+ ++|++++|+|||+...++.+| ++ |
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 344567999999999 889999999999999999999 85 6
No 101
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.05 E-value=0.0096 Score=46.99 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=33.8
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCC-hHHHHHHH-HhCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQ-MLYYESLQ-ELQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~-~~~a~~lL-~~gl~ 175 (190)
...+|||+.++|+ ++|++++|+||++ ...+..++ ++|+.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 3479999999999 7899999999999 68888888 88875
No 102
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.00 E-value=0.0049 Score=53.40 Aligned_cols=38 Identities=11% Similarity=-0.125 Sum_probs=34.7
Q ss_pred CCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCch
Q 029610 141 YPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~ 178 (190)
=|||.++|+ ++|++++|+|||+++.+..+| .+|+...+
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yF 191 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYF 191 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccc
Confidence 399999999 889999999999999999999 99997654
No 103
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.91 E-value=0.0063 Score=44.23 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=32.2
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHH---HHHHH-HhCCCCchHHHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLY---YESLQ-ELQYHLTEFMVW 182 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~lL-~~gl~~~~~~v~ 182 (190)
..+++||+.|+|+ ++|+++.++||.+... ...-| .+|+....+.|+
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ 64 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII 64 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE
Confidence 4679999999999 8899999999977433 33445 889988776554
No 104
>PLN02645 phosphoglycolate phosphatase
Probab=95.79 E-value=0.0065 Score=52.54 Aligned_cols=70 Identities=21% Similarity=0.372 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCCChHH---HHHHH-HhCCCCchHHHHH
Q 029610 113 DALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQMLY---YESLQ-ELQYHLTEFMVWE 183 (190)
Q Consensus 113 e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~lL-~~gl~~~~~~v~~ 183 (190)
+++.+++..|+-.+.+.+-.-|.. ..+|||+.++|+ ++|++++++||++... ...-| ++|+...++.|+.
T Consensus 19 ~~~~~~~~~~~~~~~D~DGtl~~~-~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~t 95 (311)
T PLN02645 19 ENADELIDSVETFIFDCDGVIWKG-DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFS 95 (311)
T ss_pred HHHHHHHHhCCEEEEeCcCCeEeC-CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEee
Confidence 334444444444444444333433 469999999998 7899999999998433 33445 7899888877653
No 105
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.76 E-value=0.0049 Score=53.50 Aligned_cols=39 Identities=3% Similarity=-0.039 Sum_probs=34.8
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-H----hCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-E----LQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~----~gl~ 175 (190)
...+|||+.++|+ ++|++++|||||++..+..++ + +++.
T Consensus 29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~ 75 (320)
T TIGR01686 29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA 75 (320)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH
Confidence 4567999999999 899999999999999999999 8 6654
No 106
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=95.68 E-value=0.0054 Score=51.07 Aligned_cols=38 Identities=11% Similarity=0.124 Sum_probs=30.5
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChH---HHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQML---YYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~lL-~~gl~~ 176 (190)
++.||+.++++ ++|+.+.++||.++. .+..-| ..|+..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG 159 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence 67899999999 899999999997755 555566 777643
No 107
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.63 E-value=0.014 Score=54.28 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=32.2
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCCh------------HHHHHHH-HhCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQM------------LYYESLQ-ELQYH 175 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~------------~~a~~lL-~~gl~ 175 (190)
+||||.+.|+ ++|++++|+|||+. ..+..++ ++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 7999999999 89999999999998 4588888 88875
No 108
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=95.55 E-value=0.0085 Score=51.90 Aligned_cols=38 Identities=11% Similarity=-0.057 Sum_probs=34.5
Q ss_pred CCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCch
Q 029610 141 YPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~~ 178 (190)
=||+.++|+ ++|++++|+||++++.+...| ++|+...+
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YF 189 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYF 189 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCccc
Confidence 399999999 889999999999999999999 99998544
No 109
>PLN02887 hydrolase family protein
Probab=95.55 E-value=0.0084 Score=56.45 Aligned_cols=31 Identities=29% Similarity=0.218 Sum_probs=24.2
Q ss_pred CCcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|.|+|+||+||||+|+-..|......+++++
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl 337 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEA 337 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence 4589999999999998766666666666655
No 110
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.52 E-value=0.0079 Score=45.80 Aligned_cols=14 Identities=14% Similarity=0.306 Sum_probs=12.9
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
|+|+||+||||++.
T Consensus 2 K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 2 KRLVMDLDNTITLT 15 (126)
T ss_pred CEEEEeCCCCcccC
Confidence 79999999999975
No 111
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.41 E-value=0.0092 Score=50.28 Aligned_cols=29 Identities=28% Similarity=0.083 Sum_probs=20.7
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
++|++|+||||+|+-..+......+.+++
T Consensus 8 ~lI~~DlDGTLL~~~~~i~~~~~~ai~~l 36 (271)
T PRK03669 8 LLIFTDLDGTLLDSHTYDWQPAAPWLTRL 36 (271)
T ss_pred eEEEEeCccCCcCCCCcCcHHHHHHHHHH
Confidence 78999999999998554444444455554
No 112
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=95.39 E-value=0.053 Score=46.52 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=31.0
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChH---HHHHHH-HhCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQML---YYESLQ-ELQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~lL-~~gl~ 175 (190)
..++.||+.++.+ ++|+++.++||.++. .+..-| ..|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 5678899999998 899999999999863 355556 67775
No 113
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.30 E-value=0.0092 Score=49.53 Aligned_cols=28 Identities=29% Similarity=0.235 Sum_probs=20.0
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
+++||+||||+|+-..+......+++++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l 28 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKL 28 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence 5899999999998655555555555554
No 114
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.27 E-value=0.0082 Score=48.32 Aligned_cols=27 Identities=33% Similarity=0.346 Sum_probs=20.4
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHh
Q 029610 5 YALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+||+||||+++-..|......+++.+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l 27 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKEL 27 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhh
Confidence 789999999998766665555555555
No 115
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.24 E-value=0.011 Score=51.20 Aligned_cols=29 Identities=28% Similarity=0.088 Sum_probs=21.4
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+|++||||||+|+-..+...+..+++.+
T Consensus 2 KLIftDLDGTLLd~~~~~~~~a~~aL~~L 30 (302)
T PRK12702 2 RLVLSSLDGSLLDLEFNSYGAARQALAAL 30 (302)
T ss_pred cEEEEeCCCCCcCCCCcCCHHHHHHHHHH
Confidence 78999999999996655555555555554
No 116
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.06 E-value=0.027 Score=42.37 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=13.2
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
No 117
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=95.06 E-value=0.022 Score=53.15 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=38.8
Q ss_pred ccCCCCCCCCHHHHHH---hCC-CcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 134 WIGANRFYPGIPDALK---FAS-SRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
.....++|||+.++|+ ++| ++++|+||+++..++.++ ++|++..
T Consensus 379 i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~ 427 (556)
T TIGR01525 379 IALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEV 427 (556)
T ss_pred EEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCee
Confidence 3345789999999999 789 999999999999999999 9999643
No 118
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.00 E-value=0.037 Score=44.20 Aligned_cols=40 Identities=18% Similarity=0.344 Sum_probs=28.0
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEc-CCChHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVT-TKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~T-nK~~~~a~~lL-~~gl~ 175 (190)
...++||+|.+.|+ ++|+++|||| +...+-|+.+| .+++.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 34689999999999 8999999999 45567999999 99988
No 119
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.98 E-value=0.012 Score=46.94 Aligned_cols=28 Identities=32% Similarity=0.368 Sum_probs=19.1
Q ss_pred EEEEecCcccccCh-HHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCDSC-GESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvDS~-~~i~~a~~~a~~~l 31 (190)
+++||+||||+++- ..+...+..+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l 29 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERL 29 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHH
Confidence 58999999999875 33444444555554
No 120
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=94.66 E-value=0.32 Score=39.70 Aligned_cols=37 Identities=11% Similarity=0.140 Sum_probs=33.3
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQ 173 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~g 173 (190)
..++=||..+..+ +++++..|+|+--..++..++ ..+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv 111 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV 111 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc
Confidence 4567799999999 899999999999999999999 776
No 121
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=94.43 E-value=0.028 Score=48.84 Aligned_cols=27 Identities=30% Similarity=0.290 Sum_probs=21.1
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
+++||+||||+++-.- +.++..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 5899999999999876 55555566666
No 122
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=94.41 E-value=0.034 Score=51.67 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=38.5
Q ss_pred ccCCCCCCCCHHHHHH---hCCC-cEEEEcCCChHHHHHHH-HhCCCC
Q 029610 134 WIGANRFYPGIPDALK---FASS-RIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~-~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.....++|||+.++|+ ++|+ +++|+||+++..++.++ ++|++.
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~ 404 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE 404 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh
Confidence 3445789999999999 8899 99999999999999999 999964
No 123
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.35 E-value=0.023 Score=44.54 Aligned_cols=14 Identities=29% Similarity=0.420 Sum_probs=12.7
Q ss_pred EEEEecCcccccCh
Q 029610 4 LYALDFDGVLCDSC 17 (190)
Q Consensus 4 lviFDlDGTLvDS~ 17 (190)
+|+||+||||++|-
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 58999999999986
No 124
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=94.26 E-value=0.031 Score=48.44 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=21.5
Q ss_pred CcEEEEecCcccccChHHH---HHHHHHHHHHh
Q 029610 2 ADLYALDFDGVLCDSCGES---SLSAVKAAKVR 31 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i---~~a~~~a~~~l 31 (190)
.++|+||+||||++.-..+ -..+..+++.|
T Consensus 126 ~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred ceEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 4799999999999997543 24454555555
No 125
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=94.23 E-value=0.021 Score=45.58 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 029610 2 ADLYALDFDGVLCDS 16 (190)
Q Consensus 2 ~~lviFDlDGTLvDS 16 (190)
.|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 479999999999997
No 126
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=94.12 E-value=0.019 Score=41.32 Aligned_cols=15 Identities=40% Similarity=0.474 Sum_probs=13.4
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
+++||+||||+++-+
T Consensus 1 ~~vfD~D~tl~~~~~ 15 (139)
T cd01427 1 AVLFDLDGTLLDSEP 15 (139)
T ss_pred CeEEccCCceEccCc
Confidence 589999999999875
No 127
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=94.01 E-value=0.031 Score=45.31 Aligned_cols=15 Identities=40% Similarity=0.452 Sum_probs=12.7
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
+|++|+||||+|+-.
T Consensus 1 ~i~~DlDGTLL~~~~ 15 (221)
T TIGR02463 1 WVFSDLDGTLLDSHS 15 (221)
T ss_pred CEEEeCCCCCcCCCC
Confidence 589999999999743
No 128
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.99 E-value=0.084 Score=40.91 Aligned_cols=33 Identities=12% Similarity=-0.040 Sum_probs=28.6
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 144 IPDALKFASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+.+.|+++|++++|+|||+...+..++ ++|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~ 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE
Confidence 455556889999999999999999999 999873
No 129
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=93.76 E-value=0.042 Score=47.71 Aligned_cols=30 Identities=10% Similarity=0.058 Sum_probs=20.9
Q ss_pred CcEEEEecCcccccChHHH---HHHHHHHHHHh
Q 029610 2 ADLYALDFDGVLCDSCGES---SLSAVKAAKVR 31 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i---~~a~~~a~~~l 31 (190)
.++|+||+||||+++-..+ -..+..+++.|
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL 160 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL 160 (303)
T ss_pred ccEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence 4799999999999996655 23343444444
No 130
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=93.74 E-value=0.064 Score=45.12 Aligned_cols=44 Identities=25% Similarity=0.249 Sum_probs=36.4
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCChH---HHHHHH-HhCCCCchHHHHH
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQML---YYESLQ-ELQYHLTEFMVWE 183 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~---~a~~lL-~~gl~~~~~~v~~ 183 (190)
++||+.+.|+ ++|++++++||.+.. .....| .+|+++..+.|+-
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~t 72 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFT 72 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEc
Confidence 8999999999 789999999996665 366667 8899888777653
No 131
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.73 E-value=0.031 Score=46.15 Aligned_cols=27 Identities=22% Similarity=0.103 Sum_probs=16.8
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
+|+||+||||+++-. +...+..+++++
T Consensus 1 li~~DlDGTLl~~~~-~~~~~~~ai~~l 27 (225)
T TIGR02461 1 VIFTDLDGTLLPPGY-EPGPAREALEEL 27 (225)
T ss_pred CEEEeCCCCCcCCCC-CchHHHHHHHHH
Confidence 589999999998532 223333444443
No 132
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=93.66 E-value=0.036 Score=46.18 Aligned_cols=15 Identities=40% Similarity=0.576 Sum_probs=13.3
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
+|+||+||||+|+-.
T Consensus 1 li~~DlDGTll~~~~ 15 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG 15 (256)
T ss_pred CEEEcCCCCCcCCCC
Confidence 589999999999865
No 133
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.43 E-value=0.042 Score=42.10 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=14.4
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++++||+||||.++-.
T Consensus 1 ~~~~~d~dgtl~~~~~ 16 (147)
T TIGR01656 1 PALFLDRDGVINEDTV 16 (147)
T ss_pred CeEEEeCCCceeccCC
Confidence 5799999999999985
No 134
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=93.42 E-value=0.048 Score=46.16 Aligned_cols=14 Identities=29% Similarity=0.553 Sum_probs=12.5
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 48999999999983
No 135
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.37 E-value=0.033 Score=42.96 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=20.7
Q ss_pred CCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhC
Q 029610 140 FYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQ 173 (190)
Q Consensus 140 lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~g 173 (190)
+-||+.+.|+ .+.+.++|.|+..+..++.++ .++
T Consensus 37 ~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 37 LRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp E-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHT
T ss_pred eCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhh
Confidence 3466777666 555677777777777777776 554
No 136
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=93.30 E-value=0.13 Score=40.25 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=33.2
Q ss_pred CCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..=||+.++|+ .+.+.++|.|++++..|+.++ +++...
T Consensus 42 ~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~ 82 (162)
T TIGR02251 42 FKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGG 82 (162)
T ss_pred EECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCC
Confidence 44599999999 556999999999999999999 998653
No 137
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.29 E-value=0.036 Score=42.96 Aligned_cols=37 Identities=5% Similarity=-0.005 Sum_probs=22.6
Q ss_pred hCCCcEEEEcCCChHHHHHHHHhCCCCc--hHHHHHHHHHh
Q 029610 150 FASSRIYIVTTKQMLYYESLQELQYHLT--EFMVWELVQRW 188 (190)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~lL~~gl~~~--~~~v~~~~~~~ 188 (190)
..|+..++...+. .++..-+.-+..+ ++.+||.++.|
T Consensus 110 ~ag~~~~v~~~~~--~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 110 KVGLSVAVADAHP--LLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HCCCeEecCCcCH--HHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 7788877777764 2322224334434 45689988887
No 138
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.21 E-value=0.13 Score=43.03 Aligned_cols=45 Identities=11% Similarity=0.015 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcC---CChHHHHHHH-HhCCCCchHHHH
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTT---KQMLYYESLQ-ELQYHLTEFMVW 182 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~Tn---K~~~~a~~lL-~~gl~~~~~~v~ 182 (190)
..++||+.+.|+ ++|+++.++|| ++...+...+ .+|+..+.+.|+
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 467899999998 89999999998 6678888888 999988876664
No 139
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.10 E-value=0.051 Score=42.89 Aligned_cols=16 Identities=31% Similarity=0.538 Sum_probs=14.1
Q ss_pred CcEEEEecCcccccCh
Q 029610 2 ADLYALDFDGVLCDSC 17 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~ 17 (190)
.++++||+||||+++-
T Consensus 13 ~k~~~~D~Dgtl~~~~ 28 (166)
T TIGR01664 13 SKVAAFDLDGTLITTR 28 (166)
T ss_pred CcEEEEeCCCceEecC
Confidence 4899999999999864
No 140
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=93.10 E-value=0.13 Score=43.65 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=37.0
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCC---hHHHHHHH-HhCCCCchHHHHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQ---MLYYESLQ-ELQYHLTEFMVWE 183 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~---~~~a~~lL-~~gl~~~~~~v~~ 183 (190)
..++|||+.++|+ ++|++++++||.+ ......-+ .+|+......|+-
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t 69 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS 69 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence 3568999999998 7899999999954 44444566 8999888777664
No 141
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=92.99 E-value=0.13 Score=40.89 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=26.7
Q ss_pred HHHHhCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 146 DALKFASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 146 e~L~~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..|+++|++++|+|||++..++.++ ++|+.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~ 74 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIK 74 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHCCCc
Confidence 4445789999999999999999999 99996
No 142
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=92.92 E-value=0.067 Score=51.26 Aligned_cols=29 Identities=24% Similarity=0.282 Sum_probs=19.1
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+|++|+||||+|+-..+......+++.+
T Consensus 417 KLIfsDLDGTLLd~d~~i~~~t~eAL~~L 445 (694)
T PRK14502 417 KIVYTDLDGTLLNPLTYSYSTALDALRLL 445 (694)
T ss_pred eEEEEECcCCCcCCCCccCHHHHHHHHHH
Confidence 89999999999996443333333444444
No 143
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=92.85 E-value=0.13 Score=48.14 Aligned_cols=39 Identities=10% Similarity=0.155 Sum_probs=36.4
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..+++||+.++|+ ++|++++|+||+++..++.++ ++|++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 4679999999999 789999999999999999999 99996
No 144
>PRK10444 UMP phosphatase; Provisional
Probab=92.67 E-value=0.088 Score=44.22 Aligned_cols=15 Identities=33% Similarity=0.372 Sum_probs=13.7
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
++|+||+||||.++-
T Consensus 2 ~~v~~DlDGtL~~~~ 16 (248)
T PRK10444 2 KNVICDIDGVLMHDN 16 (248)
T ss_pred cEEEEeCCCceEeCC
Confidence 789999999999994
No 145
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=92.17 E-value=1.2 Score=41.33 Aligned_cols=58 Identities=10% Similarity=0.036 Sum_probs=36.5
Q ss_pred cCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHHhCCCcEEEEcCCChHHHHHHH-H-hCCCC
Q 029610 109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQMLYYESLQ-E-LQYHL 176 (190)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~lL-~-~gl~~ 176 (190)
|+..+++++.-.++...| |.+... |..-+...+.| +.+|+|.-|+-.++..+ . +|.+.
T Consensus 75 Gl~~~die~vaRavlpkf---~~~dv~------~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~ 134 (498)
T PLN02499 75 GVHESEIESVARAVLPKF---YMDDVD------MEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADE 134 (498)
T ss_pred CCCHHHHHHHHHHHhhHH---HHhhCC------HHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCce
Confidence 666666655555444443 222211 22333333566 99999999999999999 5 88764
No 146
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=92.11 E-value=0.14 Score=42.01 Aligned_cols=25 Identities=16% Similarity=0.096 Sum_probs=18.5
Q ss_pred EEEEecCcccccChHHHHHHHHHHHH
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAK 29 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~ 29 (190)
+|++||||||.|+-..+.... .+.+
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~ 25 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR 25 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH
Confidence 588999999999876665543 4444
No 147
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=92.04 E-value=0.074 Score=42.30 Aligned_cols=15 Identities=47% Similarity=0.696 Sum_probs=13.8
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
|+++||+||||.|..
T Consensus 8 ~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 8 KLVILDVDGVMTDGR 22 (169)
T ss_pred eEEEEeCceeeECCe
Confidence 799999999999983
No 148
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.86 E-value=0.08 Score=44.01 Aligned_cols=14 Identities=29% Similarity=0.700 Sum_probs=12.6
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
++++|||||||++.
T Consensus 4 ~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 4 RAFFFDYDGTLSEI 17 (244)
T ss_pred EEEEEecCccccCC
Confidence 68999999999984
No 149
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=91.55 E-value=0.097 Score=41.09 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=12.1
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
|+++||+||||+-+-.
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 6789999999998765
No 150
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=91.47 E-value=0.21 Score=41.36 Aligned_cols=28 Identities=21% Similarity=0.208 Sum_probs=18.8
Q ss_pred EEEEecCccccc---ChHHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCD---SCGESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvD---S~~~i~~a~~~a~~~l 31 (190)
+|+.||||||+| +-..+..-...+.+++
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~ 33 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDH 33 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHh
Confidence 677899999997 4455555555555544
No 151
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=91.18 E-value=0.19 Score=43.02 Aligned_cols=48 Identities=23% Similarity=0.172 Sum_probs=37.2
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHH----HHH-HhCCCCchHHHHH
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYE----SLQ-ELQYHLTEFMVWE 183 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~----~lL-~~gl~~~~~~v~~ 183 (190)
...++|||+.+.|+ ++|+++..+||.+.+..+ ++. ..+++.+.+.|+.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~T 76 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVT 76 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeec
Confidence 45789999999999 899999999997765444 333 3677788877753
No 152
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=91.14 E-value=0.12 Score=41.20 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=11.4
Q ss_pred CcEEEEecCcccccCh
Q 029610 2 ADLYALDFDGVLCDSC 17 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~ 17 (190)
+++|+||||+||-+--
T Consensus 3 PklvvFDLD~TlW~~~ 18 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPW 18 (169)
T ss_dssp -SEEEE-STTTSSSS-
T ss_pred CcEEEEcCcCCCCchh
Confidence 5899999999996543
No 153
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=91.13 E-value=0.35 Score=40.71 Aligned_cols=40 Identities=25% Similarity=0.127 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
..++|++.++|+ ++|++++|||||+...+..++ ++|+..+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 457788899998 889999999999999999999 9998643
No 154
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.92 E-value=0.091 Score=44.19 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=24.5
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ 170 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL 170 (190)
-.|+++.++++ +.+++++|+|||+.......+
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~ 154 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG 154 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC
Confidence 45889999888 568899999999876554333
No 155
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.84 E-value=0.11 Score=43.42 Aligned_cols=28 Identities=14% Similarity=0.156 Sum_probs=20.0
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+++||+||||.++-..+-.+ ..+++.+
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a-~~~l~~l 29 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEA-ETFVHEL 29 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCH-HHHHHHH
Confidence 789999999999987655533 3444433
No 156
>PRK10444 UMP phosphatase; Provisional
Probab=90.39 E-value=0.26 Score=41.38 Aligned_cols=44 Identities=11% Similarity=0.112 Sum_probs=36.1
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH----HhCCCCchHHHH
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ----ELQYHLTEFMVW 182 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL----~~gl~~~~~~v~ 182 (190)
+++||+.+.|+ ++|+++.++||.+......+. .+|+..+.+.|+
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ 67 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY 67 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe
Confidence 78999999998 889999999998876655554 578888877664
No 157
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=90.36 E-value=0.13 Score=43.65 Aligned_cols=26 Identities=12% Similarity=0.243 Sum_probs=20.9
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChH
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQML 164 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~ 164 (190)
.--|+|+.++|+ ++|. ++|+|||+..
T Consensus 142 ~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~ 170 (279)
T TIGR01452 142 HFSYAKLREACAHLREPGC-LFVATNRDPW 170 (279)
T ss_pred CCCHHHHHHHHHHHhcCCC-EEEEeCCCCC
Confidence 345999999999 4676 8999999864
No 158
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.83 E-value=0.14 Score=42.47 Aligned_cols=26 Identities=27% Similarity=0.252 Sum_probs=18.4
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHh
Q 029610 5 YALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
++||+||||.|+-.-+-.|. .+++.+
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~-e~i~~l 26 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAA-EALNRL 26 (236)
T ss_pred CEEeCcCccCcCCccCcCHH-HHHHHH
Confidence 68999999999987655333 444444
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=89.74 E-value=0.17 Score=43.66 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=18.8
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
|+++||+||||.++-..+ ..+-.+++.+
T Consensus 29 ~~~~~D~DGtl~~~~~~~-~ga~e~l~~l 56 (311)
T PLN02645 29 ETFIFDCDGVIWKGDKLI-EGVPETLDML 56 (311)
T ss_pred CEEEEeCcCCeEeCCccC-cCHHHHHHHH
Confidence 789999999999976433 3333444333
No 160
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=89.65 E-value=0.18 Score=40.00 Aligned_cols=17 Identities=47% Similarity=0.589 Sum_probs=15.0
Q ss_pred CCcEEEEecCcccccCh
Q 029610 1 MADLYALDFDGVLCDSC 17 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~ 17 (190)
|.|+++||.||||.|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 35899999999999986
No 161
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.46 E-value=0.19 Score=36.39 Aligned_cols=19 Identities=26% Similarity=0.450 Sum_probs=14.1
Q ss_pred EEEecCcccccChHHHHHH
Q 029610 5 YALDFDGVLCDSCGESSLS 23 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~~a 23 (190)
++||+||||.++-..+--|
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999976544433
No 162
>PLN03017 trehalose-phosphatase
Probab=88.30 E-value=0.3 Score=43.62 Aligned_cols=29 Identities=28% Similarity=0.236 Sum_probs=17.9
Q ss_pred cEEEEecCcccc---c-ChH-HHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLC---D-SCG-ESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLv---D-S~~-~i~~a~~~a~~~l 31 (190)
.+|+||+||||+ + .-. .+...+..+++++
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~L 145 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKL 145 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHH
Confidence 478899999999 3 332 2334444445555
No 163
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=88.06 E-value=0.49 Score=46.68 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=14.4
Q ss_pred CCcEEEEecCcccccCh
Q 029610 1 MADLYALDFDGVLCDSC 17 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~ 17 (190)
|.++|++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 45899999999999655
No 164
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=88.03 E-value=0.45 Score=45.91 Aligned_cols=13 Identities=46% Similarity=0.792 Sum_probs=12.4
Q ss_pred cEEEEecCccccc
Q 029610 3 DLYALDFDGVLCD 15 (190)
Q Consensus 3 ~lviFDlDGTLvD 15 (190)
++++||+||||++
T Consensus 493 rLi~~D~DGTL~~ 505 (726)
T PRK14501 493 RLLLLDYDGTLVP 505 (726)
T ss_pred eEEEEecCccccC
Confidence 7999999999997
No 165
>PLN02151 trehalose-phosphatase
Probab=87.92 E-value=0.32 Score=43.24 Aligned_cols=29 Identities=24% Similarity=0.210 Sum_probs=18.4
Q ss_pred cEEEEecCcccc----cChH-HHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLC----DSCG-ESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLv----DS~~-~i~~a~~~a~~~l 31 (190)
.+++|||||||+ |.-. .+...+..+++.+
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~L 132 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKL 132 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHHH
Confidence 478999999999 3333 2333444555555
No 166
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=87.82 E-value=0.3 Score=37.43 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.2
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
.++++||||||+++..
T Consensus 3 ~~lvldld~tl~~~~~ 18 (148)
T smart00577 3 KTLVLDLDETLVHSTH 18 (148)
T ss_pred cEEEEeCCCCeECCCC
Confidence 5799999999999965
No 167
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=87.80 E-value=0.27 Score=42.05 Aligned_cols=16 Identities=38% Similarity=0.611 Sum_probs=14.5
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++++|||||||++-.+
T Consensus 19 ~~~~lDyDGTl~~i~~ 34 (266)
T COG1877 19 RLLFLDYDGTLTEIVP 34 (266)
T ss_pred eEEEEecccccccccc
Confidence 7999999999999874
No 168
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=87.63 E-value=0.87 Score=36.19 Aligned_cols=30 Identities=17% Similarity=0.115 Sum_probs=26.2
Q ss_pred HHHhCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 147 ALKFASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 147 ~L~~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.|+++|++++|+||++...++.++ ++|+..
T Consensus 59 ~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~ 89 (183)
T PRK09484 59 CLLTSGIEVAIITGRKSKLVEDRMTTLGITH 89 (183)
T ss_pred HHHHCCCEEEEEeCCCcHHHHHHHHHcCCce
Confidence 344789999999999999999999 999863
No 169
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=87.42 E-value=0.66 Score=38.79 Aligned_cols=27 Identities=30% Similarity=0.310 Sum_probs=20.0
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHH
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAK 29 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~ 29 (190)
.+++.||||||+|+-+......+..++
T Consensus 3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~ 29 (247)
T PF05116_consen 3 RLLASDLDGTLIDGDDEALARLEELLE 29 (247)
T ss_dssp EEEEEETBTTTBHCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCcCCCHHHHHHHHHHHH
Confidence 689999999999766665555554444
No 170
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=87.09 E-value=6.5 Score=33.01 Aligned_cols=39 Identities=15% Similarity=0.068 Sum_probs=29.5
Q ss_pred CCCCCCCHHHHHHhCC-CcEEEEcCCChHHHHHHH-HhCCC
Q 029610 137 ANRFYPGIPDALKFAS-SRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 137 ~~~lypGv~e~L~~~g-~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..+|=|-.+++|-+-. .+..|-||..+.-|.++| .+||.
T Consensus 98 ~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGie 138 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIE 138 (244)
T ss_pred hcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChH
Confidence 3456666778877222 228999999999999999 99984
No 171
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=87.04 E-value=0.35 Score=37.97 Aligned_cols=14 Identities=29% Similarity=0.259 Sum_probs=12.3
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
++++||.||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999953
No 172
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=86.99 E-value=1.3 Score=36.51 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=36.3
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcC---CChHHHHHHH-H-hCCCCchHHHHH
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTT---KQMLYYESLQ-E-LQYHLTEFMVWE 183 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~Tn---K~~~~a~~lL-~-~gl~~~~~~v~~ 183 (190)
...+|||+.+.|+ ++|+++.++|| |+.......| . +|+....+.|+.
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iit 66 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIIT 66 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeee
Confidence 4568999999998 78999999995 5555555555 4 899888777764
No 173
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=86.32 E-value=1.5 Score=43.38 Aligned_cols=38 Identities=21% Similarity=0.226 Sum_probs=35.9
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+|+||+.++++ ++|+++.++|++....+..+. +.|+..
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~ 569 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPS 569 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 78999999999 899999999999999999999 999964
No 174
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=86.29 E-value=0.38 Score=39.23 Aligned_cols=15 Identities=40% Similarity=0.456 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
+++++||||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 699999999999864
No 175
>PRK10671 copA copper exporting ATPase; Provisional
Probab=85.68 E-value=1.1 Score=43.93 Aligned_cols=40 Identities=15% Similarity=0.097 Sum_probs=36.5
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
..+++||+.+.|+ ++|++++++|++++..++.++ ++|++.
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~ 691 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE 691 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE
Confidence 4578999999999 889999999999999999999 999964
No 176
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=85.34 E-value=2.1 Score=35.09 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=29.5
Q ss_pred HHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCCChHH
Q 029610 126 WMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQMLY 165 (190)
Q Consensus 126 y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~ 165 (190)
|.+-|..+- -...+||.+.+.|+ ++|++++|-||-+-..
T Consensus 91 Wa~Gy~sge-lkahlypDav~~ik~wk~~g~~vyiYSSGSV~A 132 (229)
T COG4229 91 WAHGYESGE-LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA 132 (229)
T ss_pred HHhccccCc-cccccCHhHHHHHHHHHHcCCcEEEEcCCCchh
Confidence 333454443 35789999999999 8999999999977553
No 177
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=84.82 E-value=0.72 Score=37.93 Aligned_cols=13 Identities=38% Similarity=0.639 Sum_probs=8.0
Q ss_pred EEecCcccccChH
Q 029610 6 ALDFDGVLCDSCG 18 (190)
Q Consensus 6 iFDlDGTLvDS~~ 18 (190)
+||+||||++-.+
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6999999998775
No 178
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=84.38 E-value=2.1 Score=35.25 Aligned_cols=39 Identities=21% Similarity=0.011 Sum_probs=33.5
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
....|+..+.|+ ++|+++.++|+++...+..++ .+|+..
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 346678889988 789999999999999999999 999743
No 179
>PLN02580 trehalose-phosphatase
Probab=84.20 E-value=0.54 Score=42.27 Aligned_cols=15 Identities=33% Similarity=0.432 Sum_probs=12.0
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
.+++|||||||+.=.
T Consensus 120 ~~LfLDyDGTLaPIv 134 (384)
T PLN02580 120 IALFLDYDGTLSPIV 134 (384)
T ss_pred eEEEEecCCccCCCC
Confidence 478899999997543
No 180
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=83.74 E-value=1.9 Score=34.63 Aligned_cols=35 Identities=23% Similarity=0.151 Sum_probs=29.7
Q ss_pred CCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 141 YPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
.|...+.|+ ++|++++||||++...+..++ .++++
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 333567776 889999999999999999999 99876
No 181
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=83.56 E-value=1.6 Score=42.42 Aligned_cols=39 Identities=10% Similarity=0.081 Sum_probs=36.4
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.+++||+.++|+ ++|++++++|++.+..++.+. ++||+.
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~ 609 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF 609 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe
Confidence 478999999999 789999999999999999999 999964
No 182
>COG4996 Predicted phosphatase [General function prediction only]
Probab=83.27 E-value=0.62 Score=36.12 Aligned_cols=16 Identities=25% Similarity=0.262 Sum_probs=13.6
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++|+||.||||-|--.
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 5899999999999643
No 183
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=82.96 E-value=1.9 Score=37.52 Aligned_cols=41 Identities=17% Similarity=0.120 Sum_probs=34.8
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
.+..++-+.+.|+ ++|++++++|+|+...+..+. .++++.|
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 3456777888888 899999999999999999999 9998754
No 184
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=82.77 E-value=0.69 Score=36.27 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=14.0
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++++||.||||.++.+
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 6899999999999654
No 185
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=81.31 E-value=0.87 Score=42.60 Aligned_cols=15 Identities=20% Similarity=0.501 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
|+++||+||||+.+.
T Consensus 169 Kia~fD~DGTLi~t~ 183 (526)
T TIGR01663 169 KIAGFDLDGTIIKTK 183 (526)
T ss_pred cEEEEECCCCccccC
Confidence 789999999999864
No 186
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.57 E-value=0.99 Score=35.30 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
+.+++|||+|||-|.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 579999999999994
No 187
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=79.55 E-value=4.1 Score=35.35 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=38.1
Q ss_pred CCCCCCCHHHHHH---hC----CCcEEEEcCCC----hHHHHHHH-HhCCCCchHHHHH
Q 029610 137 ANRFYPGIPDALK---FA----SSRIYIVTTKQ----MLYYESLQ-ELQYHLTEFMVWE 183 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~----g~~laI~TnK~----~~~a~~lL-~~gl~~~~~~v~~ 183 (190)
..+++||+.++|+ .+ |+++.++||.. +..++.+. .+|+.+..+.|+.
T Consensus 14 g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~ 72 (321)
T TIGR01456 14 GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQ 72 (321)
T ss_pred CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHh
Confidence 3567999999998 55 99999999986 44466777 8999998887765
No 188
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=79.34 E-value=0.91 Score=40.87 Aligned_cols=19 Identities=26% Similarity=0.527 Sum_probs=16.3
Q ss_pred cEEEEecCcccccChHHHH
Q 029610 3 DLYALDFDGVLCDSCGESS 21 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~ 21 (190)
+.+.||+||||+|+.+...
T Consensus 76 K~i~FD~dgtlI~t~sg~v 94 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTKSGKV 94 (422)
T ss_pred ceEEEecCCceeecCCcce
Confidence 6899999999999987543
No 189
>PRK06769 hypothetical protein; Validated
Probab=78.94 E-value=1.3 Score=34.94 Aligned_cols=12 Identities=25% Similarity=0.365 Sum_probs=11.1
Q ss_pred cEEEEecCcccc
Q 029610 3 DLYALDFDGVLC 14 (190)
Q Consensus 3 ~lviFDlDGTLv 14 (190)
++++||.||||.
T Consensus 5 ~~~~~d~d~~~~ 16 (173)
T PRK06769 5 QAIFIDRDGTIG 16 (173)
T ss_pred cEEEEeCCCccc
Confidence 899999999993
No 190
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=78.62 E-value=1.3 Score=37.97 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=19.1
Q ss_pred cEEEEecCcccccChHHHHHHHH
Q 029610 3 DLYALDFDGVLCDSCGESSLSAV 25 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~ 25 (190)
+.++||+||||.++-..|--|..
T Consensus 9 ~~~l~DlDGvl~~G~~~ipga~e 31 (269)
T COG0647 9 DGFLFDLDGVLYRGNEAIPGAAE 31 (269)
T ss_pred CEEEEcCcCceEeCCccCchHHH
Confidence 78999999999999876666553
No 191
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=78.32 E-value=1.5 Score=34.29 Aligned_cols=23 Identities=43% Similarity=0.769 Sum_probs=19.0
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQ 162 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~ 162 (190)
++|+|.+.|+ +.|+.++|+||..
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~ 55 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQS 55 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-C
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCcc
Confidence 4579999999 8999999999973
No 192
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=77.91 E-value=1.3 Score=37.28 Aligned_cols=15 Identities=40% Similarity=0.448 Sum_probs=13.7
Q ss_pred CCcEEEEecCccccc
Q 029610 1 MADLYALDFDGVLCD 15 (190)
Q Consensus 1 ~~~lviFDlDGTLvD 15 (190)
|..+|+-|+||||++
T Consensus 6 ~~~lIFtDlD~TLl~ 20 (274)
T COG3769 6 MPLLIFTDLDGTLLP 20 (274)
T ss_pred cceEEEEcccCcccC
Confidence 568899999999999
No 193
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=77.12 E-value=2.7 Score=33.70 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=28.9
Q ss_pred CCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 142 PGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
|.+.+-+. ++|+++.|+||+.+.-+.... ++|+.+
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 44555554 889999999999999999999 999864
No 194
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=76.76 E-value=4.4 Score=32.51 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=33.5
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.++-|...+.|+ ++|++++|+|+++...++.++ .++++-
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 346678888888 789999999999999999999 888763
No 195
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=76.56 E-value=3.4 Score=32.85 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=32.2
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
.+-|...+.|+ ++|++++|+|+++...+..++ .+++.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 35577778887 799999999999999999999 88876
No 196
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=75.68 E-value=4.8 Score=32.36 Aligned_cols=37 Identities=5% Similarity=0.009 Sum_probs=31.1
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+-|...+.|+ ++|++++|+|+++...+..++ .++++.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 4466777777 789999999999999999998 888763
No 197
>PLN02382 probable sucrose-phosphatase
Probab=75.10 E-value=1.6 Score=39.40 Aligned_cols=14 Identities=21% Similarity=0.385 Sum_probs=11.4
Q ss_pred EEEEecCcccccCh
Q 029610 4 LYALDFDGVLCDSC 17 (190)
Q Consensus 4 lviFDlDGTLvDS~ 17 (190)
+|+-||||||+|+-
T Consensus 11 lI~sDLDGTLL~~~ 24 (413)
T PLN02382 11 MIVSDLDHTMVDHH 24 (413)
T ss_pred EEEEcCCCcCcCCC
Confidence 55669999999873
No 198
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=74.60 E-value=5.9 Score=32.64 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=32.3
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.+-|...+.|+ ++|++++|||+++...+..++ .+++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 46677778887 789999999999999999999 888764
No 199
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.50 E-value=1.6 Score=43.51 Aligned_cols=14 Identities=29% Similarity=0.555 Sum_probs=12.5
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
++++||+||||+.-
T Consensus 592 RLlfLDyDGTLap~ 605 (934)
T PLN03064 592 RLLILGFNATLTEP 605 (934)
T ss_pred eEEEEecCceeccC
Confidence 68999999999974
No 200
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=74.39 E-value=3.2 Score=33.54 Aligned_cols=24 Identities=33% Similarity=0.548 Sum_probs=21.6
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQ 162 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~ 162 (190)
.+.||+.+.|. +.|+++.|+||++
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQs 57 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQS 57 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCC
Confidence 57899999999 8999999999965
No 201
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=74.12 E-value=6.2 Score=32.48 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=31.9
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
++-|...+.|+ ++|++++|+|+++...+..++ .++++.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34567778887 889999999999999999999 888763
No 202
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.08 E-value=1.7 Score=42.66 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=13.4
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++++||+||||+.-.+
T Consensus 508 rll~LDyDGTL~~~~~ 523 (797)
T PLN03063 508 RLLILGFYGTLTEPRN 523 (797)
T ss_pred eEEEEecCccccCCCC
Confidence 6899999999996543
No 203
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=73.66 E-value=2.3 Score=33.36 Aligned_cols=14 Identities=29% Similarity=0.173 Sum_probs=12.5
Q ss_pred cEEEEecCcccccC
Q 029610 3 DLYALDFDGVLCDS 16 (190)
Q Consensus 3 ~lviFDlDGTLvDS 16 (190)
++|++|+||||.+.
T Consensus 26 ~~vv~D~Dgtl~~~ 39 (170)
T TIGR01668 26 KGVVLDKDNTLVYP 39 (170)
T ss_pred CEEEEecCCccccC
Confidence 78999999999954
No 204
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=72.03 E-value=11 Score=32.20 Aligned_cols=41 Identities=10% Similarity=0.104 Sum_probs=33.5
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHH----HHHHH-HhCCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLY----YESLQ-ELQYHL 176 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~----a~~lL-~~gl~~ 176 (190)
..+++-||+.|.|+ ++|.++.-+||..++. +..-| .+|+.-
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~ 167 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ 167 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence 45789999999999 8999999999988776 55556 677643
No 205
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=71.93 E-value=7.3 Score=31.11 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=30.8
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
.+-|...+.|+ ++|+++++||+++...+..++ .+|+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 35566777777 799999999999999999998 88854
No 206
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=71.30 E-value=5.7 Score=31.68 Aligned_cols=29 Identities=17% Similarity=-0.012 Sum_probs=18.6
Q ss_pred cEEEEecCccccc----Ch-HHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCD----SC-GESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvD----S~-~~i~~a~~~a~~~l 31 (190)
++++||+|.||+- .+ +++....+...+..
T Consensus 42 k~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~ 75 (168)
T PF09419_consen 42 KALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQF 75 (168)
T ss_pred eEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHC
Confidence 7999999999982 33 44444544444333
No 207
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=71.29 E-value=4.8 Score=40.04 Aligned_cols=39 Identities=18% Similarity=0.216 Sum_probs=36.0
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
+|+||+.+.++ ++|+++.++|+.....+..+. +.|+..+
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~ 579 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSP 579 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCC
Confidence 58999999999 899999999999999999999 9999654
No 208
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=70.90 E-value=1.1 Score=37.12 Aligned_cols=36 Identities=3% Similarity=-0.207 Sum_probs=28.9
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
-|||+.++|+ ++|+++ |+|||+.......+ .+|...
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~ 178 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY 178 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH
Confidence 3899999998 679997 99999998887666 666543
No 209
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=70.65 E-value=7.3 Score=32.39 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=32.0
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.+-|...+.|+ ++|++++|+|+++...+..++ .++++.
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 45566777777 889999999999999999999 888763
No 210
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=70.58 E-value=5.6 Score=34.68 Aligned_cols=48 Identities=25% Similarity=0.447 Sum_probs=36.7
Q ss_pred cccCCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH----HhCCC-CchHHH
Q 029610 133 TWIGANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ----ELQYH-LTEFMV 181 (190)
Q Consensus 133 ~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL----~~gl~-~~~~~v 181 (190)
-|. ...+.||+.|.|+ +.|.++.++||.+...-+..+ ++|+. +.++.+
T Consensus 33 lW~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i 88 (306)
T KOG2882|consen 33 LWL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENI 88 (306)
T ss_pred eee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccc
Confidence 355 5789999999999 889999999998877766665 56776 444433
No 211
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=70.00 E-value=7.6 Score=32.46 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=30.9
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
.+.+-..+.|+ ++|++++|+|+++...+..++ .+|++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34455667776 789999999999999999999 98875
No 212
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=69.58 E-value=10 Score=31.36 Aligned_cols=36 Identities=19% Similarity=0.105 Sum_probs=30.4
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..+...+.|+ ++|+++.++|+++...+..++ .+|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455677777 789999999999999999999 98874
No 213
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=68.92 E-value=5.1 Score=30.54 Aligned_cols=16 Identities=38% Similarity=0.592 Sum_probs=13.3
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++++|||||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 5899999999999875
No 214
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=68.58 E-value=3.3 Score=36.81 Aligned_cols=17 Identities=29% Similarity=0.460 Sum_probs=15.3
Q ss_pred CCcEEEEecCcccccCh
Q 029610 1 MADLYALDFDGVLCDSC 17 (190)
Q Consensus 1 ~~~lviFDlDGTLvDS~ 17 (190)
|.++++||.||||+...
T Consensus 1 ~~k~l~lDrDgtl~~~~ 17 (354)
T PRK05446 1 MQKILFIDRDGTLIEEP 17 (354)
T ss_pred CCcEEEEeCCCCccCCC
Confidence 67899999999999975
No 215
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=68.20 E-value=9.2 Score=31.60 Aligned_cols=39 Identities=18% Similarity=0.176 Sum_probs=33.8
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
.+.-|-..+.|+ ++|++++|+|+.+-..+..++ .+++..
T Consensus 19 ~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 19 KTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 346677788887 899999999999999999999 999875
No 216
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=67.93 E-value=6.1 Score=32.55 Aligned_cols=36 Identities=17% Similarity=0.075 Sum_probs=30.1
Q ss_pred CCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 142 PGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
|...++++ ++|+.++++|+++...++.++ .+++..|
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p 63 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTP 63 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCC
Confidence 55666665 789999999999999999999 8887665
No 217
>PRK10976 putative hydrolase; Provisional
Probab=67.52 E-value=9.7 Score=31.44 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=30.7
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+=|...+.|+ ++|++++|||+++...+..++ .++++.
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 4455677777 789999999999999999998 888763
No 218
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=66.78 E-value=3.5 Score=32.14 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=15.9
Q ss_pred cEEEEecCcccccChHHHH
Q 029610 3 DLYALDFDGVLCDSCGESS 21 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~ 21 (190)
..+++|||.||+.|...-.
T Consensus 7 l~LVLDLDeTLihs~~~~~ 25 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTKDPT 25 (156)
T ss_pred eEEEEeCCCCcccccccCc
Confidence 4689999999999987643
No 219
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=66.70 E-value=3.3 Score=35.84 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=14.3
Q ss_pred CcEEEEecCcccccCh
Q 029610 2 ADLYALDFDGVLCDSC 17 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~ 17 (190)
.|+|++|+|+||.++.
T Consensus 3 ~k~~v~DlDnTlw~gv 18 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGV 18 (320)
T ss_pred eEEEEEcCCCCCCCCE
Confidence 4899999999998885
No 220
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=65.84 E-value=11 Score=31.18 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=30.7
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+=|...+.|+ ++|++++|||+++...+..++ .+++..
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 4456667777 889999999999999999999 888753
No 221
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=62.84 E-value=15 Score=28.55 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=28.3
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHH---HHH-H
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYE---SLQ-E 171 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~---~lL-~ 171 (190)
...||+.++++ ++|+++.++|+.+...+. ..+ .
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 56799999999 889999999999988774 666 5
No 222
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=61.42 E-value=4.4 Score=31.97 Aligned_cols=13 Identities=31% Similarity=0.532 Sum_probs=11.6
Q ss_pred EEEEecCcccccC
Q 029610 4 LYALDFDGVLCDS 16 (190)
Q Consensus 4 lviFDlDGTLvDS 16 (190)
.|++|.||||.-|
T Consensus 1 VVvsDIDGTiT~S 13 (157)
T PF08235_consen 1 VVVSDIDGTITKS 13 (157)
T ss_pred CEEEeccCCcCcc
Confidence 4899999999877
No 223
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=61.37 E-value=3.8 Score=33.04 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=12.9
Q ss_pred EEEEecCcccccChHH
Q 029610 4 LYALDFDGVLCDSCGE 19 (190)
Q Consensus 4 lviFDlDGTLvDS~~~ 19 (190)
-++.|.||||+|-.-.
T Consensus 8 ~~ciDIDGtit~~~t~ 23 (194)
T COG5663 8 RCCIDIDGTITDDPTF 23 (194)
T ss_pred heeeccCCceecCccc
Confidence 3789999999997543
No 224
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=61.20 E-value=13 Score=30.27 Aligned_cols=28 Identities=14% Similarity=-0.045 Sum_probs=24.8
Q ss_pred hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 150 FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
++|++++|+|+++...++.++ .+++..|
T Consensus 28 ~~gi~~viaTGR~~~~v~~~~~~l~l~~~ 56 (236)
T TIGR02471 28 GDAVGFGIATGRSVESAKSRYAKLNLPSP 56 (236)
T ss_pred CCCceEEEEeCCCHHHHHHHHHhCCCCCC
Confidence 789999999999999999999 8887543
No 225
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=59.37 E-value=29 Score=29.58 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=32.9
Q ss_pred CCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 138 NRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
.++-||+.++++ ++-.+-.|+|+..+..++++. +.|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence 678999999999 667788999999999999999 8886
No 226
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=56.94 E-value=4.2 Score=31.97 Aligned_cols=29 Identities=28% Similarity=0.161 Sum_probs=25.2
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
.+.+..|+|-||.|..+++....| ...+.
T Consensus 3 kk~iaIDmD~vLadll~ewv~~~N-~y~D~ 31 (180)
T COG4502 3 KKTIAIDMDTVLADLLREWVKRYN-IYKDK 31 (180)
T ss_pred CceEEeeHHHHHHHHHHHHHHHhh-hcccc
Confidence 489999999999999999999998 55555
No 227
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=56.03 E-value=14 Score=29.08 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=29.0
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQ 173 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~g 173 (190)
++-|.+.+.|+ ++|++++|+|+++...+..++ .++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 45577788887 788999999999999999988 643
No 228
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=54.74 E-value=28 Score=33.70 Aligned_cols=50 Identities=14% Similarity=0.055 Sum_probs=39.6
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC-----chHHHHHHHHHh
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL-----TEFMVWELVQRW 188 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~-----~~~~v~~~~~~~ 188 (190)
++=||+.+.++ +.|+++.++|+-....+..+. ++|++. .++.=.++|++|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v~~l 504 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALIRQE 504 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHHHHH
Confidence 45589999998 889999999999999999999 999962 223344556555
No 229
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=54.34 E-value=7.6 Score=31.35 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=14.8
Q ss_pred cEEEEecCcccccChHH
Q 029610 3 DLYALDFDGVLCDSCGE 19 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~ 19 (190)
++++||-||||..--++
T Consensus 6 k~lflDRDGtin~d~~~ 22 (181)
T COG0241 6 KALFLDRDGTINIDKGD 22 (181)
T ss_pred cEEEEcCCCceecCCCc
Confidence 69999999999877774
No 230
>PF03387 Herpes_UL46: Herpesvirus UL46 protein; InterPro: IPR005051 The UL46 protein (VP11/12) is produced in the late phase of Herpes virus infection in a manner highly dependent on viral DNA synthesis, and is mainly distributed at the edge of the nucleus in the cytoplasm. It is a tegument phosphoprotein reported to modulate the activity of UL48 (anti-TNF) protein.; GO: 0006355 regulation of transcription, DNA-dependent
Probab=53.63 E-value=1.2e+02 Score=28.08 Aligned_cols=97 Identities=19% Similarity=0.087 Sum_probs=62.8
Q ss_pred cCcccccChHHHHHHHHHHHHHhCCC-CCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccccccccC
Q 029610 9 FDGVLCDSCGESSLSAVKAAKVRWPG-LFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEG 87 (190)
Q Consensus 9 lDGTLvDS~~~i~~a~~~a~~~l~~~-~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~~~~~ 87 (190)
.+|.|+.+-.++..|+-.++++..-. .+.++-... ....++..-.+....-+|.+.+. +
T Consensus 16 ~~gClLptp~~~~~aAv~AL~~~ae~~~p~~L~~~~------R~~~L~~~~~N~VPEs~Iv~~~~--------------~ 75 (444)
T PF03387_consen 16 EKGCLLPTPEDLLEAAVRALRDRAEEVLPAGLFSAD------RASALAARRDNTVPESLIVRCVA--------------G 75 (444)
T ss_pred cCceecCCchhHHHHHHHHHHHHHHhcCCcccccHH------HHHHHhcCCCCCCChHHHHHhhc--------------c
Confidence 57999999999999998888877111 111232221 23344444445555555555553 3
Q ss_pred cchhhHhhhhhhhhhhhhhhccCChHHHHHHHH-HHHHH
Q 029610 88 LTVEGILENWSKIKPVIMEDWSENRDALVDLFG-KVRDE 125 (190)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~-~~r~~ 125 (190)
...+++...|....+..+.+.+++...+.+.+. .|-+|
T Consensus 76 D~~~eY~r~Y~~a~k~~l~~~~ls~~~v~r~~~a~Ywky 114 (444)
T PF03387_consen 76 DTNGEYRRHYDAAAKRRLARAGLSRDAVWRAYLASYWKY 114 (444)
T ss_pred CchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 346788888988888888888999988877664 44443
No 231
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=52.36 E-value=28 Score=29.26 Aligned_cols=44 Identities=20% Similarity=0.260 Sum_probs=35.3
Q ss_pred CCCCHHHHHH---hCCCcEEEEcCCCh---HHHHHHH-HhCCCCchHHHHH
Q 029610 140 FYPGIPDALK---FASSRIYIVTTKQM---LYYESLQ-ELQYHLTEFMVWE 183 (190)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~---~~a~~lL-~~gl~~~~~~v~~ 183 (190)
.-||..|.|+ .++.++-.+||-.. +.+..=| .+|+++-++.||.
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~t 74 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFT 74 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcC
Confidence 6799999999 58899999999544 4444555 8899999998874
No 232
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=50.99 E-value=20 Score=30.18 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=31.2
Q ss_pred CCCCCCCHHHHHH---h-CCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 137 ANRFYPGIPDALK---F-ASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 137 ~~~lypGv~e~L~---~-~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
...+-|...+.|+ + .|+.++|+|+.+...+..++ .+++
T Consensus 34 ~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 34 QVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred cccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 3456788888888 4 69999999999999999888 7664
No 233
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=50.63 E-value=39 Score=29.51 Aligned_cols=27 Identities=19% Similarity=0.404 Sum_probs=22.6
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCCh
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQM 163 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~ 163 (190)
.-.+||.+.++++ ++|+.++|.||-..
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~ 169 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTR 169 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCC
Confidence 3457899999999 78999999999754
No 234
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=49.98 E-value=12 Score=31.06 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=18.8
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
+++||.||||.=+...+..-+...++.+
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~l 40 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKL 40 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHH
Confidence 8999999999877655444444444433
No 235
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=49.69 E-value=33 Score=29.89 Aligned_cols=52 Identities=12% Similarity=0.226 Sum_probs=37.2
Q ss_pred CCCCCCCCHHHHHH---hCC-CcEEEEcCCChHHHHHHH-H-----hCCCCchHHHHHHHHH
Q 029610 136 GANRFYPGIPDALK---FAS-SRIYIVTTKQMLYYESLQ-E-----LQYHLTEFMVWELVQR 187 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~lL-~-----~gl~~~~~~v~~~~~~ 187 (190)
..-.|||...|+++ +.| ++++|+||-..+.+.+-| . .-++-+....|.-+-|
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~~~dql~~sLdA~~~~~~~~InR 150 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELKLPDQLYVSLDAPDEKTFRRINR 150 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhccCCEEEEEeccCCHHHHHHhcC
Confidence 44579999999999 788 799999999984444333 2 2356666677766543
No 236
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=49.37 E-value=9.4 Score=35.24 Aligned_cols=15 Identities=27% Similarity=0.423 Sum_probs=12.9
Q ss_pred cEEEEecCcccccCh
Q 029610 3 DLYALDFDGVLCDSC 17 (190)
Q Consensus 3 ~lviFDlDGTLvDS~ 17 (190)
+.|++|+||||.-|=
T Consensus 376 kiVVsDiDGTITkSD 390 (580)
T COG5083 376 KIVVSDIDGTITKSD 390 (580)
T ss_pred cEEEEecCCcEEehh
Confidence 789999999998653
No 237
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=49.21 E-value=11 Score=31.79 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=13.8
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++++||+||||.+...
T Consensus 159 ~~~~~D~dgtl~~~~~ 174 (300)
T PHA02530 159 KAVIFDIDGTLAKMGG 174 (300)
T ss_pred CEEEEECCCcCcCCCC
Confidence 5899999999999653
No 238
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=49.05 E-value=9.9 Score=33.00 Aligned_cols=17 Identities=24% Similarity=0.446 Sum_probs=14.0
Q ss_pred CcEEEEecCcccccChH
Q 029610 2 ADLYALDFDGVLCDSCG 18 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~ 18 (190)
+.+|+||+|-||+.+.+
T Consensus 122 phVIVfDlD~TLItd~~ 138 (297)
T PF05152_consen 122 PHVIVFDLDSTLITDEG 138 (297)
T ss_pred CcEEEEECCCcccccCC
Confidence 36899999999997643
No 239
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=48.42 E-value=6.5 Score=27.11 Aligned_cols=10 Identities=50% Similarity=0.823 Sum_probs=8.7
Q ss_pred EEEecCcccc
Q 029610 5 YALDFDGVLC 14 (190)
Q Consensus 5 viFDlDGTLv 14 (190)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 3499999999
No 240
>PTZ00445 p36-lilke protein; Provisional
Probab=46.00 E-value=8.5 Score=32.04 Aligned_cols=13 Identities=31% Similarity=0.401 Sum_probs=12.4
Q ss_pred cEEEEecCccccc
Q 029610 3 DLYALDFDGVLCD 15 (190)
Q Consensus 3 ~lviFDlDGTLvD 15 (190)
++|++|||=||++
T Consensus 44 k~Va~D~DnTlI~ 56 (219)
T PTZ00445 44 KVIASDFDLTMIT 56 (219)
T ss_pred eEEEecchhhhhh
Confidence 7999999999999
No 241
>COG4996 Predicted phosphatase [General function prediction only]
Probab=45.95 E-value=24 Score=27.47 Aligned_cols=40 Identities=10% Similarity=0.040 Sum_probs=35.0
Q ss_pred CCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 136 GANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
...++||.|.++|+ ..|+.++.+|=+...-+-+.| .+++.
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 45689999999999 789999999999998888888 88864
No 242
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=45.35 E-value=24 Score=27.48 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=34.8
Q ss_pred cCCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 135 IGANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
...-++|+.|.+.++ +. +.++|+|+-...++.+++ -.|+.
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc
Confidence 445689999999999 56 999999999999999999 88864
No 243
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=45.14 E-value=61 Score=33.45 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=33.5
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
+|=+||+|.++ ++|+|+-|.|+-.++.|..+- ..++--+
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~ 693 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQ 693 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCC
Confidence 67799999999 899999999999999998888 7665433
No 244
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=44.71 E-value=36 Score=27.65 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=30.9
Q ss_pred CCHHHHHH--hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 142 PGIPDALK--FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 142 pGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
||+.+.|+ .+.+.++|=|+-....++.++ .+|+
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcc
Confidence 99999999 779999999999999999999 8876
No 245
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=43.21 E-value=36 Score=25.72 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=24.5
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHH
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYE 167 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~ 167 (190)
..+.+++.+.|+ ++|+.+.++|+.+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 357788999997 789999999999877543
No 246
>PRK11426 hypothetical protein; Provisional
Probab=41.99 E-value=38 Score=26.00 Aligned_cols=30 Identities=7% Similarity=0.060 Sum_probs=23.4
Q ss_pred hhhhhhhhccCChHHHHHHHHHHHHHHHHh
Q 029610 100 IKPVIMEDWSENRDALVDLFGKVRDEWMDK 129 (190)
Q Consensus 100 l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~ 129 (190)
..+.+..+.|+++++....+.++.....++
T Consensus 74 ~i~~lA~q~Gl~~~~~~~~LA~~LP~~VDk 103 (132)
T PRK11426 74 AVSDLGQKLGVDTSTASSLLAEQLPKIIDA 103 (132)
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHhHHHHhc
Confidence 445677788999999888888888777655
No 247
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=41.58 E-value=42 Score=26.77 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=28.0
Q ss_pred CCHH-HHHHhCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 142 PGIP-DALKFASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 142 pGv~-e~L~~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+|.- .+|.+.|+++||+|++....++.=. .+||..
T Consensus 40 DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~ 76 (170)
T COG1778 40 DGHGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH 76 (170)
T ss_pred CcHHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce
Confidence 4543 3444899999999999999999888 888863
No 248
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=40.67 E-value=16 Score=31.22 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=14.3
Q ss_pred CcEEEEecCcccccChH
Q 029610 2 ADLYALDFDGVLCDSCG 18 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~ 18 (190)
.|.++.|||.||+-|.-
T Consensus 89 kk~lVLDLDeTLvHss~ 105 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSSL 105 (262)
T ss_pred CceEEEeCCCccccccc
Confidence 37899999999988763
No 249
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=40.25 E-value=42 Score=32.68 Aligned_cols=37 Identities=22% Similarity=0.160 Sum_probs=30.6
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..++-..+.|+ ++|+++++||+++...+..++ .+|+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 34555667777 889999999999999999999 88874
No 250
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=40.22 E-value=73 Score=25.04 Aligned_cols=21 Identities=5% Similarity=0.069 Sum_probs=15.2
Q ss_pred cCChHHHHHHHHHHHHHHHHh
Q 029610 109 SENRDALVDLFGKVRDEWMDK 129 (190)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~ 129 (190)
++++++.++.++.|++|+.+.
T Consensus 16 ~lp~~e~~e~l~~Y~e~f~d~ 36 (181)
T PF08006_consen 16 KLPEEEREEILEYYEEYFDDA 36 (181)
T ss_pred cCCHHHHHHHHHHHHHHHHHh
Confidence 367777778888888877654
No 251
>PLN02887 hydrolase family protein
Probab=40.07 E-value=42 Score=31.91 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=31.5
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
++-|...+.|+ ++|+.++|||+++...+..++ .++++
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 45566677777 899999999999999999999 88875
No 252
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=39.46 E-value=15 Score=32.55 Aligned_cols=16 Identities=19% Similarity=0.385 Sum_probs=13.6
Q ss_pred cEEEEecCcccccChH
Q 029610 3 DLYALDFDGVLCDSCG 18 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~ 18 (190)
++|-||+|.||+-=-.
T Consensus 13 ~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 13 QVFGFDMDYTLAQYKS 28 (343)
T ss_pred CEEEECccccccccCh
Confidence 7899999999997544
No 253
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=39.13 E-value=17 Score=29.16 Aligned_cols=12 Identities=33% Similarity=0.390 Sum_probs=11.3
Q ss_pred cEEEEecCcccc
Q 029610 3 DLYALDFDGVLC 14 (190)
Q Consensus 3 ~lviFDlDGTLv 14 (190)
+.|++|||-|||
T Consensus 29 kgvi~DlDNTLv 40 (175)
T COG2179 29 KGVILDLDNTLV 40 (175)
T ss_pred cEEEEeccCcee
Confidence 689999999998
No 254
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=37.94 E-value=18 Score=24.99 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=12.3
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 40 ~l~L~eDGT~VddEe 54 (74)
T smart00266 40 TLVLEEDGTIVDDEE 54 (74)
T ss_pred EEEEecCCcEEccHH
Confidence 477899999999854
No 255
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=37.75 E-value=18 Score=25.39 Aligned_cols=15 Identities=33% Similarity=0.350 Sum_probs=12.6
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 41 ~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 41 TLVLEEDGTAVDSED 55 (81)
T ss_pred EEEEecCCCEEccHH
Confidence 478899999999854
No 256
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=37.11 E-value=19 Score=25.13 Aligned_cols=15 Identities=27% Similarity=0.257 Sum_probs=12.5
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 42 ~lvL~eDGTeVddEe 56 (78)
T cd01615 42 TLVLEEDGTEVDDEE 56 (78)
T ss_pred EEEEeCCCcEEccHH
Confidence 478999999999854
No 257
>COG2442 Uncharacterized conserved protein [Function unknown]
Probab=36.67 E-value=98 Score=21.50 Aligned_cols=29 Identities=17% Similarity=0.313 Sum_probs=22.3
Q ss_pred CcchhhHhhhhhhhhhhhhhhccCChHHHHHHHHHHHHH
Q 029610 87 GLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDE 125 (190)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~ 125 (190)
|.+.++++++|+. ++.+++.+++..+.++
T Consensus 43 G~s~eeil~dyp~----------Lt~~dI~aal~ya~~~ 71 (79)
T COG2442 43 GESIEEILADYPD----------LTLEDIRAALRYAADR 71 (79)
T ss_pred CCCHHHHHHhCCC----------CCHHHHHHHHHHHHHH
Confidence 7778888888864 6788888888866665
No 258
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=36.35 E-value=20 Score=25.01 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=12.5
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 42 ~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 42 TLVLEEDGTVVDTEE 56 (78)
T ss_pred EEEEeCCCCEEccHH
Confidence 478899999999854
No 259
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=35.68 E-value=58 Score=21.84 Aligned_cols=28 Identities=18% Similarity=-0.059 Sum_probs=20.1
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
.-|+||=|+.-+||+- +.-++.++++.+
T Consensus 25 s~iiFDNded~tdSa~-llp~ie~a~~~~ 52 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSAA-LLPAIEQARADV 52 (65)
T ss_pred CCeeecCCCcccchHH-HHHHHHHHHHHH
Confidence 4689999999999986 344555555444
No 260
>KOG0398 consensus Mitochondrial/chloroplast ribosomal protein L5/L7 [Translation, ribosomal structure and biogenesis]
Probab=35.20 E-value=40 Score=28.41 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=33.3
Q ss_pred CCCCCCHHHHHH----hCCCcEEEEcC-CChHHHHHHH-HhCCCCch
Q 029610 138 NRFYPGIPDALK----FASSRIYIVTT-KQMLYYESLQ-ELQYHLTE 178 (190)
Q Consensus 138 ~~lypGv~e~L~----~~g~~laI~Tn-K~~~~a~~lL-~~gl~~~~ 178 (190)
..+||.|....+ ..|..+.|-|| |....++.+| -+++.+.+
T Consensus 229 ~~~FPeI~An~d~~pkt~Gm~vnI~T~ak~d~~ar~lls~~~~PF~~ 275 (278)
T KOG0398|consen 229 QGVFPEIRANFDAVPKTRGMDVNISTTAKSDQEARKLLSLMGMPFRE 275 (278)
T ss_pred cccCchhhhhhhccccccceeEeecccccchHHHHHHHHhcCCcccC
Confidence 468999987776 67999999988 7777888888 78887765
No 261
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=35.06 E-value=21 Score=25.02 Aligned_cols=15 Identities=20% Similarity=0.290 Sum_probs=12.3
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 44 ~lvL~eDGT~VddEe 58 (80)
T cd06536 44 TLVLAEDGTIVEDED 58 (80)
T ss_pred EEEEecCCcEEccHH
Confidence 467899999999854
No 262
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=34.74 E-value=1.1e+02 Score=29.85 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=33.8
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
++=||+.+.++ +.|+++.++|+-....+..+- +.|++
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId 485 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 485 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 44599999998 889999999999999999999 99995
No 263
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=34.48 E-value=20 Score=30.71 Aligned_cols=17 Identities=35% Similarity=0.311 Sum_probs=13.9
Q ss_pred EEEecCcccccChHHHH
Q 029610 5 YALDFDGVLCDSCGESS 21 (190)
Q Consensus 5 viFDlDGTLvDS~~~i~ 21 (190)
|+||.||||.|--.|.+
T Consensus 124 IAFDgDaVLfsDesE~v 140 (264)
T PF06189_consen 124 IAFDGDAVLFSDESERV 140 (264)
T ss_pred EEEcCCeEeecCcchHh
Confidence 79999999998766543
No 264
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=33.72 E-value=85 Score=25.71 Aligned_cols=61 Identities=16% Similarity=-0.072 Sum_probs=36.8
Q ss_pred CChHHHHHHHHHHHHHHHHhh--hhcccCCCCCCCC-HHHHHH---hCCCcEEEEcCC--ChHHHHHHH
Q 029610 110 ENRDALVDLFGKVRDEWMDKD--LTTWIGANRFYPG-IPDALK---FASSRIYIVTTK--QMLYYESLQ 170 (190)
Q Consensus 110 ~~~e~~~~~~~~~r~~y~~~y--~~~~~~~~~lypG-v~e~L~---~~g~~laI~TnK--~~~~a~~lL 170 (190)
++++++-+.+.+.+.+|.... -..-...-.+++. +.++++ ++|+.++|.||- +.+..+.++
T Consensus 19 ~t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~ 87 (213)
T PRK10076 19 ITLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLA 87 (213)
T ss_pred cCHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH
Confidence 456666666677777664210 0001112235565 567777 789999999997 555566665
No 265
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=33.49 E-value=24 Score=24.64 Aligned_cols=15 Identities=27% Similarity=0.237 Sum_probs=11.9
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 42 ~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 42 RLVLEEDGTEVDDEE 56 (78)
T ss_dssp EEEETTTTCBESSCH
T ss_pred EEEEeCCCcEEccHH
Confidence 367889999999743
No 266
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=33.21 E-value=61 Score=31.66 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=34.7
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+|=|++.+.++ +.|+++.++|+-....+..+. +.||..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 56699999998 889999999999999999999 999964
No 267
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=32.56 E-value=1.4e+02 Score=25.29 Aligned_cols=60 Identities=5% Similarity=0.028 Sum_probs=38.7
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 102 PVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 102 ~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
..++.+.+++.+++.+++.. ....+=+|+.++++ ++++++.|.|.--...++.+| +.|..
T Consensus 67 h~llv~~~l~k~~i~~~V~~--------------s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~ 130 (246)
T PF05822_consen 67 HELLVEQGLTKSEIEEAVKE--------------SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF 130 (246)
T ss_dssp HHHHHHHT-BGGGHHHHHHC--------------S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--
T ss_pred HHHHHhcCcCHHHHHHHHHh--------------cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC
Confidence 34445556666666665542 23567799999998 899999999999999999999 76654
No 268
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=32.46 E-value=56 Score=32.99 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=34.0
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
+|=|++.+.++ ++|+++.++|+.....+..+. ..|+-
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 56689999999 899999999999999999999 99984
No 269
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=32.46 E-value=74 Score=29.12 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=34.1
Q ss_pred CCCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 138 NRFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
.++.|++.+.++ +.|+++.++|+.....+..+- ..|+
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI 386 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Confidence 478899999999 789999999999999999999 9987
No 270
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=32.06 E-value=23 Score=29.27 Aligned_cols=18 Identities=17% Similarity=0.045 Sum_probs=13.1
Q ss_pred cEEEEecCcccccChHHH
Q 029610 3 DLYALDFDGVLCDSCGES 20 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i 20 (190)
+.|-||||||+.----.+
T Consensus 59 ~~v~~D~~GT~m~iPYGY 76 (271)
T PF06901_consen 59 HTVTFDFQGTKMVIPYGY 76 (271)
T ss_pred eeEEEeccceEEEeechh
Confidence 578999999987544333
No 271
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=31.45 E-value=58 Score=29.96 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=26.3
Q ss_pred CCHHHHHH---hCCCcEEEEcCCChHHHHHHH--HhCC
Q 029610 142 PGIPDALK---FASSRIYIVTTKQMLYYESLQ--ELQY 174 (190)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~lL--~~gl 174 (190)
|.+..+|+ ++|.++.++||.+-.+++.++ -+|-
T Consensus 186 ~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~ 223 (448)
T PF05761_consen 186 PKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGP 223 (448)
T ss_dssp CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGC
T ss_pred chHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCC
Confidence 78888888 889999999999999999999 4455
No 272
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=31.29 E-value=1.2e+02 Score=30.27 Aligned_cols=37 Identities=8% Similarity=0.050 Sum_probs=34.1
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
+|=|++.+.++ ++|+++.++|+-....+..+. ..||.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 56689999999 889999999999999999999 99996
No 273
>PTZ00174 phosphomannomutase; Provisional
Probab=31.13 E-value=71 Score=26.26 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=24.8
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ 170 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL 170 (190)
++-|...+.|+ ++|++++|||+.+-..+...+
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 34455667777 789999999999888776666
No 274
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=31.00 E-value=67 Score=32.76 Aligned_cols=38 Identities=11% Similarity=-0.052 Sum_probs=34.8
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+|-|++.++++ ++|+++.++|+-....+..+. ..||..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~ 687 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIP 687 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 56799999999 899999999999999999999 999953
No 275
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=29.74 E-value=45 Score=23.19 Aligned_cols=24 Identities=8% Similarity=-0.006 Sum_probs=15.8
Q ss_pred hhhhccCChHHHHHHHHHHHHHHH
Q 029610 104 IMEDWSENRDALVDLFGKVRDEWM 127 (190)
Q Consensus 104 ~~~~~g~~~e~~~~~~~~~r~~y~ 127 (190)
-+++.|.+.+++...-..|+..|.
T Consensus 22 GLrR~Gfs~~~i~~l~~ayr~l~~ 45 (83)
T PF13720_consen 22 GLRRRGFSKEEISALRRAYRILFR 45 (83)
T ss_dssp HHHHTTS-HHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHh
Confidence 345667777777777777777763
No 276
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=29.22 E-value=31 Score=24.18 Aligned_cols=15 Identities=33% Similarity=0.271 Sum_probs=12.4
Q ss_pred EEEEecCcccccChH
Q 029610 4 LYALDFDGVLCDSCG 18 (190)
Q Consensus 4 lviFDlDGTLvDS~~ 18 (190)
-++++=|||.||+-.
T Consensus 41 ~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 41 SLVLDEDGTGVDTEE 55 (79)
T ss_pred EEEEecCCcEEccHH
Confidence 378899999999854
No 277
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=28.79 E-value=1.1e+02 Score=23.68 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=29.6
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCCh-HHHHHHH-HhCCCC
Q 029610 137 ANRFYPGIPDALK---FASSRIYIVTTKQM-LYYESLQ-ELQYHL 176 (190)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~-~~a~~lL-~~gl~~ 176 (190)
....||.+...|. ++|+.++++|+-.. ..+...| .+.+..
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQ 86 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCc
Confidence 3457888888887 89999999999654 4556666 666543
No 278
>PLN02580 trehalose-phosphatase
Probab=28.74 E-value=65 Score=29.06 Aligned_cols=35 Identities=11% Similarity=-0.059 Sum_probs=28.6
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH-H
Q 029610 137 ANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ-E 171 (190)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL-~ 171 (190)
...+-|++.++|+ .+..+++|+|+.+...+.+++ -
T Consensus 139 ~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 139 RALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred cccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 3455678899998 444789999999999999988 5
No 279
>PRK00010 rplE 50S ribosomal protein L5; Validated
Probab=28.50 E-value=62 Score=26.02 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=29.3
Q ss_pred CCCCCCCHHHHHH----hCCCcEEEEcC-CChHHHHHHH-HhCCCCc
Q 029610 137 ANRFYPGIPDALK----FASSRIYIVTT-KQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 137 ~~~lypGv~e~L~----~~g~~laI~Tn-K~~~~a~~lL-~~gl~~~ 177 (190)
....||++. .+ -.|..+.|+|| |..+.+..+| .+|+.+.
T Consensus 134 e~~~FPei~--yd~~~~i~G~~Itivtta~t~~ea~~LLs~~g~Pf~ 178 (179)
T PRK00010 134 EQIIFPEID--YDKIDKIRGMDITIVTTAKTDEEARALLKAFGFPFR 178 (179)
T ss_pred hhhcCCCcc--cCccCCcCCceEEEEeccCCHHHHHHHHHHcCCCCC
Confidence 346788884 32 57899999988 7778888888 8888653
No 280
>CHL00078 rpl5 ribosomal protein L5
Probab=28.48 E-value=62 Score=26.07 Aligned_cols=38 Identities=29% Similarity=0.260 Sum_probs=28.8
Q ss_pred CCCCCCHHHHHH----hCCCcEEEEcC-CChHHHHHHH-HhCCCCc
Q 029610 138 NRFYPGIPDALK----FASSRIYIVTT-KQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 138 ~~lypGv~e~L~----~~g~~laI~Tn-K~~~~a~~lL-~~gl~~~ 177 (190)
...||++. .+ -.|..+.|+|+ |....++.+| .+|+.+.
T Consensus 136 ~~~FPEi~--~d~~~~i~G~~Itivtta~t~~ea~~Ll~~~g~Pf~ 179 (181)
T CHL00078 136 QLMFPEID--YDKIDQIRGMDISIVTTAKTDQEGLALLKELGMPFK 179 (181)
T ss_pred hccCCCcc--cCccCCcCCCeEEEEEeeCCHHHHHHHHHHcCCCcC
Confidence 45788887 33 67899999888 6667788888 8888653
No 281
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=28.23 E-value=28 Score=30.97 Aligned_cols=27 Identities=30% Similarity=0.286 Sum_probs=20.1
Q ss_pred EEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 4 LYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
.++||.||+|+-+-.-|-.+. .|++.+
T Consensus 37 gfafDIDGVL~RG~~~i~~~~-~Alr~L 63 (389)
T KOG1618|consen 37 GFAFDIDGVLFRGHRPIPGAL-KALRRL 63 (389)
T ss_pred eEEEecccEEEecCCCCcchH-HHHHHH
Confidence 589999999998877655544 456665
No 282
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=28.13 E-value=84 Score=30.49 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=33.9
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
++=||+.+.++ +.|+++.++|+-....+..+- +.|++
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 45699999998 789999999999999999999 99995
No 283
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=27.98 E-value=46 Score=20.26 Aligned_cols=26 Identities=35% Similarity=0.372 Sum_probs=18.6
Q ss_pred cEEEEecCcccccChHHHHHHHHHHHHHhC
Q 029610 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRW 32 (190)
Q Consensus 3 ~lviFDlDGTLvDS~~~i~~a~~~a~~~l~ 32 (190)
++.++|.||+++...+ |+..|++.++
T Consensus 3 ~V~~~d~~~~~i~~f~----S~~eAa~~lg 28 (53)
T smart00497 3 PVYVYDLDGNLIGEFS----SIREAAKYLG 28 (53)
T ss_pred cEEEEeCCCCEEEEec----CHHHHHHHhC
Confidence 5789999999987444 4555666673
No 284
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=27.55 E-value=89 Score=31.31 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=34.7
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
+|-|++.++++ ++|+++.++|+-....+..+- ..||..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT 620 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCC
Confidence 56789999999 889999999999999999999 999964
No 285
>PHA03321 tegument protein VP11/12; Provisional
Probab=27.21 E-value=4.4e+02 Score=25.59 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=58.7
Q ss_pred cCcccccChHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccccccccCc
Q 029610 9 FDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGL 88 (190)
Q Consensus 9 lDGTLvDS~~~i~~a~~~a~~~l~~~~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~~~~~~ 88 (190)
++|.|+=+-.++..|+..|+++-.-. -.|...-. .+....+-..-.+....-+|.+.+ .+.
T Consensus 36 ~~GCLLPtP~~~l~aAV~AL~~~~e~---l~p~~L~~--~~R~~~L~~~~~N~VPESlIv~~~--------------~gD 96 (694)
T PHA03321 36 FGGCLLPTPEGLLGAAVGALRQRSDD---LQPAFLTG--ADRAAQLAARRHNSVPESLVVDGI--------------TGD 96 (694)
T ss_pred hcccccCChHHHHHHHHHHHHHHHhh---cCccchhh--HHHHHHHHhcccCCCCchhhhhhh--------------ccC
Confidence 58999999999999999888877211 11111000 001111222222222222222222 234
Q ss_pred chhhHhhhhhhhhhhhhhhccCChHHHHHHH-HHHHHHHH
Q 029610 89 TVEGILENWSKIKPVIMEDWSENRDALVDLF-GKVRDEWM 127 (190)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~-~~~r~~y~ 127 (190)
..++++..|....+..+.+.+++...+-.++ ..|.+|+.
T Consensus 97 ~~~EY~r~Y~~aakr~L~~~~LS~~~v~R~ila~YWkYLq 136 (694)
T PHA03321 97 PHCEYIKHYAAAALESLAEAGASSGQLSRAILAQYWKYLQ 136 (694)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 5678889999888888888899998876664 56665543
No 286
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.77 E-value=1e+02 Score=24.42 Aligned_cols=38 Identities=21% Similarity=0.216 Sum_probs=22.3
Q ss_pred CCCCCCHHHHHH---hCCC--cEEEEcCC-------ChHHHHHHH-HhCCC
Q 029610 138 NRFYPGIPDALK---FASS--RIYIVTTK-------QMLYYESLQ-ELQYH 175 (190)
Q Consensus 138 ~~lypGv~e~L~---~~g~--~laI~TnK-------~~~~a~~lL-~~gl~ 175 (190)
..+.|.+.+.++ +.+. ++.|+||. ....++.+- .+|+.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 345566666665 3333 47777776 356666666 66654
No 287
>PLN02151 trehalose-phosphatase
Probab=26.61 E-value=74 Score=28.40 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=28.7
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH
Q 029610 137 ANRFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ 170 (190)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL 170 (190)
...+-|+..+.|+ .++.+++|+|+.+...+..++
T Consensus 118 ~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 118 RAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred cccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHc
Confidence 3456788888998 667899999999999998887
No 288
>PF04255 DUF433: Protein of unknown function (DUF433); InterPro: IPR007367 This is a family of uncharacterised proteins.; PDB: 2GA1_B.
Probab=25.02 E-value=1.9e+02 Score=18.30 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=13.6
Q ss_pred CcchhhHhhhhhhhhhhhhhhccCChHHHHHHHH
Q 029610 87 GLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120 (190)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~ 120 (190)
|.+++++.++|+. ++.+++.+++.
T Consensus 31 G~s~eeI~~~yp~----------Lt~~~i~aAl~ 54 (56)
T PF04255_consen 31 GESPEEIAEDYPS----------LTLEDIRAALA 54 (56)
T ss_dssp T--HHHHHHHSTT------------HHHHHHHHH
T ss_pred CCCHHHHHHHCCC----------CCHHHHHHHHH
Confidence 6677888777764 46666666655
No 289
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.53 E-value=41 Score=31.53 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=12.7
Q ss_pred CcEEEEecCcccccCh
Q 029610 2 ADLYALDFDGVLCDSC 17 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~ 17 (190)
.|++++|||+||--++
T Consensus 222 kK~LVLDLDNTLWGGV 237 (574)
T COG3882 222 KKALVLDLDNTLWGGV 237 (574)
T ss_pred cceEEEecCCcccccc
Confidence 3789999999997443
No 290
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=23.96 E-value=39 Score=30.81 Aligned_cols=27 Identities=7% Similarity=0.201 Sum_probs=23.0
Q ss_pred hCCCcEEEEcCCChHHHHHHH--HhCCCC
Q 029610 150 FASSRIYIVTTKQMLYYESLQ--ELQYHL 176 (190)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~lL--~~gl~~ 176 (190)
+.|.++.++||..-.++..++ ++|.++
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW 240 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDW 240 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCc
Confidence 889999999999999999998 666443
No 291
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.88 E-value=1.1e+02 Score=29.91 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=33.7
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
++=|+..+.++ ++|+++.++|+-.+..++.+- ++||+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId 577 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID 577 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH
Confidence 46688999988 899999999999999999999 99984
No 292
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=23.83 E-value=54 Score=26.69 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=21.6
Q ss_pred CCCCCCCHHHHHH----hCCCcEEEEcCCChHHHHHHH-HhCC
Q 029610 137 ANRFYPGIPDALK----FASSRIYIVTTKQMLYYESLQ-ELQY 174 (190)
Q Consensus 137 ~~~lypGv~e~L~----~~g~~laI~TnK~~~~a~~lL-~~gl 174 (190)
...+.|++.++|+ .-+..++|+|+.+....+.+. -.++
T Consensus 17 ~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i 59 (235)
T PF02358_consen 17 AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNI 59 (235)
T ss_dssp G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-
T ss_pred ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCc
Confidence 4678899999999 345679999999999866665 4333
No 293
>PHA03322 tegument protein VP11/12; Provisional
Probab=23.34 E-value=3.1e+02 Score=26.39 Aligned_cols=98 Identities=16% Similarity=0.095 Sum_probs=59.6
Q ss_pred cCcccccChHHHHHHHHHHHHHhCCC-CCCCCCcchhhhhhhhhhhhccccccChHHHHHHHHHHhcccccccccccccC
Q 029610 9 FDGVLCDSCGESSLSAVKAAKVRWPG-LFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEG 87 (190)
Q Consensus 9 lDGTLvDS~~~i~~a~~~a~~~l~~~-~~~gl~~~~~~~~~~~~~~ir~~Ig~G~~~~l~~~~l~~~~~~~~~~~~~~~~ 87 (190)
++|.|+=+-.++..|+..|+++-.-. .+.+|-.. .....++..-.+....-+|...+. +
T Consensus 35 ~~GCLLPtP~~~l~aAV~AL~~~~e~l~P~~L~~~------~R~s~L~~~~~N~VPESlIv~~~~--------------~ 94 (674)
T PHA03322 35 RDGCLIPTPQDALESAVKALEEKTEKITPFQLFST------ERTEVLLGTHHNNVPESLIVSCMS--------------S 94 (674)
T ss_pred hcCcccCCchhHHHHHHHHHHHHHhccCCcccchH------HHHHHHHhccCCCCCchhheeccc--------------c
Confidence 58999999999999998888877211 00112211 012233333444444434333331 3
Q ss_pred cchhhHhhhhhhhhhhhhhhccCChHHHHHHH-HHHHHHH
Q 029610 88 LTVEGILENWSKIKPVIMEDWSENRDALVDLF-GKVRDEW 126 (190)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~-~~~r~~y 126 (190)
...++++..|....++.+++.+++...+-+.+ ..|.+|.
T Consensus 95 D~~~EYi~~Y~~aakr~L~~~~LS~~~v~r~~la~YWkYL 134 (674)
T PHA03322 95 DTNGAYISNYASEIQACLDDTKLSKGASWSVYENTYWKYL 134 (674)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 34677888999888888888899988776665 4454443
No 294
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=23.25 E-value=1e+02 Score=31.40 Aligned_cols=39 Identities=13% Similarity=0.303 Sum_probs=34.6
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCCc
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHLT 177 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~~ 177 (190)
+|=|||+++++ ++|+++.++|+-..+.|..+. ..|+-.+
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~ 673 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSR 673 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCC
Confidence 67799999999 899999999999999999998 8888543
No 295
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=22.55 E-value=1.1e+02 Score=30.73 Aligned_cols=37 Identities=8% Similarity=0.025 Sum_probs=34.1
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
+|=|++.++++ ++|+++.++|+-....+..+. ..||.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 56689999998 899999999999999999999 99996
No 296
>PLN03017 trehalose-phosphatase
Probab=22.48 E-value=1.1e+02 Score=27.48 Aligned_cols=32 Identities=13% Similarity=-0.032 Sum_probs=27.6
Q ss_pred CCCCCHHHHHH--hCCCcEEEEcCCChHHHHHHH
Q 029610 139 RFYPGIPDALK--FASSRIYIVTTKQMLYYESLQ 170 (190)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~lL 170 (190)
.+-|+..+.|+ .++++++|+|+.+...+..++
T Consensus 133 ~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhh
Confidence 56677888888 788999999999999998776
No 297
>PF10551 MULE: MULE transposase domain; InterPro: IPR018289 This entry represents a domain found in Mutator-like elements (MULE)-encoded tranposases, some of which also contain a zinc-finger motif [, ]. This domain is also found in a transposase for the insertion sequence element IS256 in transposon Tn4001 [].
Probab=22.38 E-value=1.8e+02 Score=19.60 Aligned_cols=36 Identities=6% Similarity=0.144 Sum_probs=31.4
Q ss_pred cEEEEcCCChHHHHHHH-HhCCCCchHHHHHHHHHhc
Q 029610 154 RIYIVTTKQMLYYESLQ-ELQYHLTEFMVWELVQRWK 189 (190)
Q Consensus 154 ~laI~TnK~~~~a~~lL-~~gl~~~~~~v~~~~~~~~ 189 (190)
+..|+|.+.......+- -+.-...-.+.|.+.|.||
T Consensus 57 p~~ii~D~~~~~~~Ai~~vfP~~~~~~C~~H~~~n~k 93 (93)
T PF10551_consen 57 PKVIISDFDKALINAIKEVFPDARHQLCLFHILRNIK 93 (93)
T ss_pred ceeeeccccHHHHHHHHHHCCCceEehhHHHHHHhhC
Confidence 78999999999888888 7866777789999999987
No 298
>cd00153 RalGDS_RA Ubiquitin domain of RalGDS-like factor (RLF) and related proteins. This CD represents the C-terminal Ras-associating (RA) domain of three closely related guanine-nucleotide exchange factors (GEF's), Ral guanine nucleotide dissociation stimulator (RalGDS), RalGDS-like (RGL), and RalGDS-like factor (RLF). The RalGDS proteins are downstream effectors of the Ras-related protein Ral, providing a mechanism for Ral activation by extracellular signals. The RA domain is structurally similar to ubiquitin and exists in a number of other signalling proteins including AF6, rasfadin, SNX27, CYR1, and STE50.
Probab=22.00 E-value=31 Score=24.53 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=28.6
Q ss_pred CcEEEEcC--CChHHHHHHH-HhCCCCchHHHHHHHHHh
Q 029610 153 SRIYIVTT--KQMLYYESLQ-ELQYHLTEFMVWELVQRW 188 (190)
Q Consensus 153 ~~laI~Tn--K~~~~a~~lL-~~gl~~~~~~v~~~~~~~ 188 (190)
|+-..+|| |....+++.| ++++.-....=|+|+|.-
T Consensus 18 YKSIlltsqDktP~VI~ral~Khnl~~~~~~~Y~L~Q~L 56 (87)
T cd00153 18 YKSILLTSQDKAPQVIRRAMEKHNLESEVAEDYELVQVL 56 (87)
T ss_pred EEEEEEecCCcCHHHHHHHHHHhCCCcCCccceEEEEEc
Confidence 67778888 6677888999 999988866778888753
No 299
>KOG1613 consensus Exosomal 3'-5' exoribonuclease complex, subunit Rrp43 [Translation, ribosomal structure and biogenesis]
Probab=21.83 E-value=78 Score=27.13 Aligned_cols=27 Identities=33% Similarity=0.432 Sum_probs=21.9
Q ss_pred CcEEEEecCcccccChHHHHHHHHHHHHHh
Q 029610 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR 31 (190)
Q Consensus 2 ~~lviFDlDGTLvDS~~~i~~a~~~a~~~l 31 (190)
+++|++|-||-+.|- ++.|...|++..
T Consensus 151 adIicLd~dG~~fDa---~w~al~aAlknv 177 (298)
T KOG1613|consen 151 ADIICLDYDGPVFDA---CWNALMAALKNV 177 (298)
T ss_pred EEEEEEcCCCcHHHH---HHHHHHHHHhcC
Confidence 378999999999884 577777777777
No 300
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=20.71 E-value=1.3e+02 Score=30.23 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=33.6
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYH 175 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~ 175 (190)
+|=|++.+.++ ++|+++.++|+-....+..+. ..||.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD 590 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 45588999998 889999999999999999999 99995
No 301
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=20.46 E-value=1.6e+02 Score=30.05 Aligned_cols=38 Identities=21% Similarity=0.155 Sum_probs=34.8
Q ss_pred CCCCCHHHHHH---hCCCcEEEEcCCChHHHHHHH-HhCCCC
Q 029610 139 RFYPGIPDALK---FASSRIYIVTTKQMLYYESLQ-ELQYHL 176 (190)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~lL-~~gl~~ 176 (190)
++=|++.+.++ ++|+++.++|+-....+..+. ..||-.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN 697 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 57799999999 899999999999999999999 999954
No 302
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=20.07 E-value=71 Score=22.23 Aligned_cols=19 Identities=21% Similarity=0.032 Sum_probs=14.6
Q ss_pred EEEEecCcccccChHHHHHHH
Q 029610 4 LYALDFDGVLCDSCGESSLSA 24 (190)
Q Consensus 4 lviFDlDGTLvDS~~~i~~a~ 24 (190)
.|+++=|||.| | .|+..+.
T Consensus 42 ~l~L~eDGTeV-t-EeyF~tL 60 (77)
T cd06535 42 RLCLYEDGTEV-T-EEYFPTL 60 (77)
T ss_pred EEEEecCCcEe-h-HHHHhcC
Confidence 57789999999 5 7876543
Done!