BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029615
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STT2|VPS29_ARATH Vacuolar protein sorting-associated protein 29 OS=Arabidopsis
thaliana GN=VPS29 PE=2 SV=1
Length = 190
Score = 350 bits (898), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 167/189 (88%), Positives = 175/189 (92%)
Query: 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHII 60
MVLVLALGDLH+PHRAADLP KFKSMLVPGKIQHI+CTGNLCIKE+HDYLK ICPDLHI+
Sbjct: 1 MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60
Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQF 120
RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQL VDILVTGHTHQF
Sbjct: 61 RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120
Query: 121 TAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
TAYKHEGGVVINPGSATGA+SSI DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180
Query: 181 KKTSTCHSA 189
KK T S
Sbjct: 181 KKPPTTSSG 189
>sp|Q7ZV68|VPS29_DANRE Vacuolar protein sorting-associated protein 29 OS=Danio rerio
GN=vps29 PE=2 SV=1
Length = 182
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 150/182 (82%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A+++E INPGSATGA+S++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFENENKFYINPGSATGAYSALESNITPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 KT 183
K+
Sbjct: 181 KS 182
>sp|Q5R9Z1|VPS29_PONAB Vacuolar protein sorting-associated protein 29 OS=Pongo abelii
GN=VPS29 PE=2 SV=1
Length = 182
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 149/182 (81%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 KT 183
K+
Sbjct: 181 KS 182
>sp|Q9QZ88|VPS29_MOUSE Vacuolar protein sorting-associated protein 29 OS=Mus musculus
GN=Vps29 PE=1 SV=1
Length = 182
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 149/182 (81%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 KT 183
K+
Sbjct: 181 KS 182
>sp|B2RZ78|VPS29_RAT Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus
GN=Vps29 PE=1 SV=2
Length = 182
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 149/182 (81%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F
Sbjct: 61 GDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 KT 183
K+
Sbjct: 181 KS 182
>sp|Q3T0M0|VPS29_BOVIN Vacuolar protein sorting-associated protein 29 OS=Bos taurus
GN=VPS29 PE=2 SV=1
Length = 186
Score = 260 bits (664), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 148/181 (81%)
Query: 3 LVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62
LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK + D+HI+RG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 63 EYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTA 122
++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEA 125
Query: 123 YKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 182
++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++KK
Sbjct: 126 FEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 185
Query: 183 T 183
+
Sbjct: 186 S 186
>sp|Q9UBQ0|VPS29_HUMAN Vacuolar protein sorting-associated protein 29 OS=Homo sapiens
GN=VPS29 PE=1 SV=1
Length = 182
Score = 259 bits (662), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 148/181 (81%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 K 182
K
Sbjct: 181 K 181
>sp|Q6DEU3|VPS29_XENTR Vacuolar protein sorting-associated protein 29 OS=Xenopus
tropicalis GN=vps29 PE=2 SV=1
Length = 182
Score = 258 bits (660), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 148/182 (81%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 KT 183
K+
Sbjct: 181 KS 182
>sp|Q6GP62|VPS29_XENLA Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis
GN=vps29 PE=2 SV=1
Length = 182
Score = 258 bits (660), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 148/182 (81%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE DYLK + D+HI+R
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 182 KT 183
K+
Sbjct: 181 KS 182
>sp|Q5ZIL2|VPS29_CHICK Vacuolar protein sorting-associated protein 29 OS=Gallus gallus
GN=VPS29 PE=2 SV=1
Length = 186
Score = 257 bits (656), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 147/181 (81%)
Query: 3 LVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62
LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC K+ +DYLK + D+H++RG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKDTYDYLKTLAGDVHVVRG 65
Query: 63 EYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTA 122
++DE YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEA 125
Query: 123 YKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 182
++HE INPGSATGA+ ++ ++ PSFVLMDI VV YVY+LI +VKV++I++KK
Sbjct: 126 FEHENKFYINPGSATGAYHALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 185
Query: 183 T 183
+
Sbjct: 186 S 186
>sp|Q54IF7|VPS29_DICDI Vacuolar protein sorting-associated protein 29 OS=Dictyostelium
discoideum GN=vps29 PE=3 SV=1
Length = 183
Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 145/181 (80%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+ ++A+GD+H+PHR+ +P +FK +LVP KIQHI+CTGNL KE+HDY K++ D+HI+R
Sbjct: 1 MFIIAIGDVHVPHRSYGIPPEFKKLLVPEKIQHILCTGNLVSKEIHDYFKVLTSDVHIVR 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G+ DE T YP+TK ++IGQFK GLCHGHQ++PWGD SLA LQRQLDVD+L++GHTH
Sbjct: 61 GDLDENTSYPDTKIVSIGQFKFGLCHGHQIVPWGDRASLAALQRQLDVDVLISGHTHVLE 120
Query: 122 AYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
++ G + +NPGSATGAFS+I+ DV PSFVLMD+ + VY+Y+LIDG+VKV+KID
Sbjct: 121 VFESNGKLFVNPGSATGAFSNISNDVIPSFVLMDVQSNNITVYIYKLIDGQVKVEKIDHV 180
Query: 182 K 182
K
Sbjct: 181 K 181
>sp|Q9UTI5|VPS29_SCHPO Vacuolar protein sorting-associated protein 29
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps29 PE=3 SV=1
Length = 187
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 128/185 (69%), Gaps = 4/185 (2%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61
+LVL +GD HIP RA L KF+ +L+PGKI I+C GNL V++YLK +C DL +++
Sbjct: 1 MLVLVIGDFHIPDRAPKLSEKFRQLLIPGKISQIICLGNLTSTSVYEYLKHVCSDLKLVK 60
Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121
G +D ++ P +T+G FK+G +GH V+P ++L++L R++D DIL+ G TH+F
Sbjct: 61 GAFDISSKAPIAGKITLGSFKIGYTNGHLVVPQDSPEALSILAREMDADILLFGGTHKFA 120
Query: 122 AYKHEGGVVINPGSATGA--FSSITYD--VNPSFVLMDIDGLRVVVYVYELIDGEVKVDK 177
AY+ +G +NPGSATGA S++ D + PSFVLMD+ G +++YVY + DGEV+V+K
Sbjct: 121 AYELDGCFFVNPGSATGAPNVSAVEDDEKIVPSFVLMDVQGAVLILYVYRIFDGEVRVEK 180
Query: 178 IDFKK 182
+ ++K
Sbjct: 181 MQYRK 185
>sp|P38759|VPS29_YEAST Vacuolar protein sorting-associated protein 29 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS29 PE=1
SV=1
Length = 282
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 94/173 (54%), Gaps = 26/173 (15%)
Query: 2 VLVLALGDLHIPHRAADLPAKFKSML-VPGKIQHIVCTGNLCIKEVHDYLKI---ICPDL 57
+L+LAL D HIP RA DLP KFK +L VP KI + GN + +D+LK I ++
Sbjct: 1 MLLLALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGNST--KSYDFLKFVNQISNNI 58
Query: 58 HIIRGEYD-------------EETR----YPETKTLTIGQFKLGLCHGHQVIPWGDLDSL 100
I+RGE+D + +R P + G K+G C G+ V+P D SL
Sbjct: 59 TIVRGEFDNGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLSL 118
Query: 101 AMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSS---ITYDVNPS 150
L RQLDVDIL+ G TH AY EG +NPGS TGAF++ I +DV S
Sbjct: 119 LALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 141 SSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 182
S I +PSF L+DI G +Y+Y ++GEVKVDK+ ++K
Sbjct: 240 SDINGSNSPSFCLLDIQGNTCTLYIYLYVNGEVKVDKVVYEK 281
>sp|O27802|Y1774_METTH Putative metallophosphoesterase MTH_1774 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1774 PE=3 SV=1
Length = 172
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Query: 2 VLVLALGDLHIPHRAADLP-AKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHII 60
+L+ + D HIP RA+++P A F + ++ I+ G+L ++ L+ + P + +
Sbjct: 1 MLIGVISDTHIPDRASEIPEAVFDAF---RDVELILHAGDLTSPDILTELETLAP-VECV 56
Query: 61 RGEYDEE--TRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTH 118
+G D P ++ I F++GL HG +V P GD L L +L D+L++GHTH
Sbjct: 57 QGNMDRHYGIETPRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTH 115
Query: 119 QFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDG 158
Q + E V++NPGS T + +PS +++ IDG
Sbjct: 116 QPFIRELEDMVLLNPGSPT-----VPRLTDPSVMVLRIDG 150
>sp|Q58040|Y623_METJA Putative metallophosphoesterase MJ0623 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0623 PE=3 SV=1
Length = 192
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 2 VLVLALGDLHIPHRAADLP-AKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHII 60
+L+ + D H+ RA +LP A F + I+ G++ KE+ D LK + + +
Sbjct: 34 MLIGVISDTHLYDRAFELPKAVFDEF---SNVDLIIHCGDVTDKEILDSLKDLA-KVVAV 89
Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQF 120
+G D P + L I K+G+ HG V P GD L +L +++ VD+L++GHTH
Sbjct: 90 KGNMDY-LNLPRKEILEINDIKIGVIHGDVVYPRGDRLKLRLLGKEMGVDVLISGHTHTP 148
Query: 121 TAYKHEGGVVINPGSAT 137
+++NPGS T
Sbjct: 149 FIDDCRDILLLNPGSPT 165
>sp|P67095|YFCE_ECOLI Phosphodiesterase YfcE OS=Escherichia coli (strain K12) GN=yfcE
PE=1 SV=1
Length = 184
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 60 IRGEYDEET-----RYPET---KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDI 111
+RG D E +P T + + + + +L L HGH P ++L L + D+
Sbjct: 70 VRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP----ENLPALNQN---DV 122
Query: 112 LVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNP-SFVLMDIDGLRVVVYVYELID 170
LV GHTH A + NPGS SI NP S+ ++D D L V+ + I
Sbjct: 123 LVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLDNDVLSVIALNDQSII 177
Query: 171 GEVKVD 176
+V ++
Sbjct: 178 AQVAIN 183
>sp|P67096|YFCE_ECOL6 Phosphodiesterase YfcE OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yfcE PE=3 SV=1
Length = 184
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 60 IRGEYDEET-----RYPET---KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDI 111
+RG D E +P T + + + + +L L HGH P ++L L + D+
Sbjct: 70 VRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP----ENLPALNQN---DV 122
Query: 112 LVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNP-SFVLMDIDGLRVVVYVYELID 170
LV GHTH A + NPGS SI NP S+ ++D D L V+ + I
Sbjct: 123 LVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLDNDVLSVIALNDQSII 177
Query: 171 GEVKVD 176
+V ++
Sbjct: 178 AQVAIN 183
>sp|P67097|YFCE_ECO57 Phosphodiesterase YfcE OS=Escherichia coli O157:H7 GN=yfcE PE=3
SV=1
Length = 184
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 60 IRGEYDEET-----RYPET---KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDI 111
+RG D E +P T + + + + +L L HGH P ++L L + D+
Sbjct: 70 VRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP----ENLPALNQN---DV 122
Query: 112 LVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNP-SFVLMDIDGLRVVVYVYELID 170
LV GHTH A + NPGS SI NP S+ ++D D L V+ + I
Sbjct: 123 LVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLDNDVLSVIALNDQSII 177
Query: 171 GEVKVD 176
+V ++
Sbjct: 178 AQVAIN 183
>sp|P47449|Y207_MYCGE Putative metallophosphoesterase MG207 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG207 PE=3
SV=2
Length = 163
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 72 ETKTLTIGQFKLGLCHGHQVIPWGDLDS----LAMLQRQLDVDILVTGHTHQFTAYKHEG 127
E + +GQ L HGHQ P +L L + +Q D+L+ GH+H K
Sbjct: 60 EIEIFQLGQINFVLMHGHQA-PRDNLKKWYQLLVLKAQQYPCDVLIFGHSHIEYTNKINM 118
Query: 128 GVVINPGS 135
+INPGS
Sbjct: 119 IQLINPGS 126
>sp|P94559|YSNB_BACSU Putative metallophosphoesterase YsnB OS=Bacillus subtilis (strain
168) GN=ysnB PE=3 SV=2
Length = 169
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 59 IIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTH 118
+++G D + + LT G K+ + HGH L ++ +L D++ GH+H
Sbjct: 50 VVKGNCDFAGDFKDELLLTAGSRKILVTHGHLHGIKQTLLNVYYRAEELGADVICFGHSH 109
Query: 119 QFTAYKHEGGVVINPGS 135
+ G ++INPGS
Sbjct: 110 IAGSEVLRGKLMINPGS 126
>sp|Q58346|P936_METJA Phosphodiesterase MJ0936 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0936 PE=1 SV=1
Length = 166
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 65 DEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYK 124
+EE + ++ I K + HGH L M + D+++ GHTH+ +
Sbjct: 75 NEENIIDDFISVEIDDLKFFITHGHH------QSVLEMAIKSGLYDVVIYGHTHERVFEE 128
Query: 125 HEGGVVINPGSATGAFSSI 143
+ +VINPG G + I
Sbjct: 129 VDDVLVINPGECCGYLTGI 147
>sp|B0TWY6|RF3_FRAP2 Peptide chain release factor 3 OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=prfC PE=3 SV=1
Length = 525
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 25/94 (26%)
Query: 43 IKEVHDYLKIICPDLH-------IIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWG 95
+ EV D +KI C ++ +G YD Y + TL G HGH++ P+
Sbjct: 153 LDEVEDIMKIKCAPMNWPIGMGKFFKGVYD---LYNDEVTLFEG------GHGHEIHPYK 203
Query: 96 DLDSLAMLQRQLDVDI---------LVTGHTHQF 120
+ LA + Q+ D+ LV G +H+F
Sbjct: 204 KIKGLANAKDQIGADLFDDLEMEIDLVRGASHEF 237
>sp|Q95QD7|LIN54_CAEEL Protein lin-54 OS=Caenorhabditis elegans GN=lin-54 PE=1 SV=1
Length = 435
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 116 HTHQFTAYKHEGGVVINPG---SATGAFSSITYDVNPSFVLMDIDG 158
T++ T YK+ GG V N S T A S+ T D P V+ D G
Sbjct: 287 ETYRMTRYKNSGGAVSNTNALMSLTNASSTATPDSGPGSVVTDEHG 332
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,453,770
Number of Sequences: 539616
Number of extensions: 3120020
Number of successful extensions: 6443
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 6413
Number of HSP's gapped (non-prelim): 42
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)