Query 029615
Match_columns 190
No_of_seqs 151 out of 1578
Neff 8.7
Searched_HMMs 29240
Date Tue Mar 26 02:07:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029615.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029615hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z2w_A Vacuolar protein sortin 100.0 5.4E-39 1.8E-43 246.1 24.4 183 1-183 10-192 (192)
2 2a22_A Vacuolar protein sortin 100.0 2.1E-37 7.1E-42 241.4 24.7 181 2-182 26-215 (215)
3 3ck2_A Conserved uncharacteriz 100.0 9.5E-33 3.2E-37 208.5 15.0 170 1-181 6-175 (176)
4 2kkn_A Uncharacterized protein 100.0 9.9E-32 3.4E-36 203.7 18.2 154 1-168 22-178 (178)
5 3qfm_A SAPH, putative uncharac 100.0 6.8E-29 2.3E-33 199.5 17.6 165 1-169 11-230 (270)
6 1s3l_A Hypothetical protein MJ 100.0 8.7E-29 3E-33 189.3 14.0 148 1-163 25-187 (190)
7 1nnw_A Hypothetical protein; s 100.0 1.5E-27 5.1E-32 188.8 16.1 160 1-168 1-222 (252)
8 1su1_A Hypothetical protein YF 99.9 2.9E-27 9.8E-32 183.2 14.2 159 1-177 25-204 (208)
9 3rqz_A Metallophosphoesterase; 99.9 9.7E-26 3.3E-30 178.5 12.3 156 1-169 3-219 (246)
10 1uf3_A Hypothetical protein TT 99.9 4E-25 1.4E-29 171.3 13.2 152 1-168 5-227 (228)
11 3ib7_A ICC protein; metallopho 99.9 1.1E-23 3.8E-28 171.8 19.1 170 2-171 26-281 (330)
12 3d03_A Phosphohydrolase; glyce 99.9 1.4E-23 4.8E-28 166.9 16.0 168 2-169 1-255 (274)
13 2yvt_A Hypothetical protein AQ 99.9 1E-23 3.6E-28 166.9 15.1 150 1-164 5-257 (260)
14 1xm7_A Hypothetical protein AQ 99.9 8.7E-24 3E-28 161.7 13.0 136 2-137 2-173 (195)
15 3av0_A DNA double-strand break 99.9 2E-22 6.9E-27 169.1 14.1 170 1-173 20-269 (386)
16 4fbk_A DNA repair and telomere 99.9 4.5E-21 1.5E-25 163.2 17.8 182 1-183 76-381 (472)
17 3t1i_A Double-strand break rep 99.9 2.1E-21 7.2E-26 164.4 14.9 182 1-183 32-337 (431)
18 4fbw_A DNA repair protein RAD3 99.9 6.7E-21 2.3E-25 160.7 16.4 182 1-183 13-318 (417)
19 1g5b_A Serine/threonine protei 99.9 2.6E-21 8.9E-26 150.6 10.3 133 1-138 12-208 (221)
20 2q8u_A Exonuclease, putative; 99.9 9.6E-21 3.3E-25 156.0 13.9 175 1-178 18-289 (336)
21 2nxf_A Putative dimetal phosph 99.8 3.3E-19 1.1E-23 144.0 18.4 84 81-169 222-314 (322)
22 2xmo_A LMO2642 protein; phosph 99.8 3.5E-19 1.2E-23 151.4 17.1 81 81-169 237-333 (443)
23 3rl5_A Metallophosphoesterase 99.8 6.9E-19 2.4E-23 142.4 17.7 129 2-140 60-279 (296)
24 3tho_B Exonuclease, putative; 99.8 6.5E-19 2.2E-23 147.5 16.8 172 2-177 1-270 (379)
25 1ute_A Protein (II purple acid 99.8 4.1E-19 1.4E-23 143.1 15.0 180 2-184 7-304 (313)
26 1ii7_A MRE11 nuclease; RAD50, 99.8 7.3E-19 2.5E-23 144.7 13.0 170 2-179 1-279 (333)
27 3tgh_A Glideosome-associated p 99.7 2.5E-15 8.4E-20 124.2 15.7 103 81-184 192-308 (342)
28 2qjc_A Diadenosine tetraphosph 99.6 4.4E-16 1.5E-20 124.2 9.0 144 2-160 19-240 (262)
29 1xzw_A Purple acid phosphatase 99.5 1E-12 3.5E-17 111.2 18.5 180 2-184 127-423 (426)
30 2qfp_A Purple acid phosphatase 99.4 1.3E-11 4.5E-16 104.3 18.4 179 2-183 120-415 (424)
31 2z72_A Protein-tyrosine-phosph 99.4 5.4E-12 1.8E-16 104.2 12.6 64 1-67 70-153 (342)
32 2dfj_A Diadenosinetetraphospha 99.4 3.1E-12 1.1E-16 102.9 9.9 63 2-67 1-69 (280)
33 1wao_1 Serine/threonine protei 99.4 2.1E-11 7.2E-16 104.5 15.7 156 2-169 213-455 (477)
34 3h63_A Serine/threonine-protei 99.2 6.4E-10 2.2E-14 90.5 14.9 157 2-169 60-302 (315)
35 1hp1_A 5'-nucleotidase; metall 99.1 5.1E-09 1.7E-13 90.6 19.1 65 2-67 9-95 (516)
36 3qfk_A Uncharacterized protein 99.1 5.7E-09 2E-13 90.6 16.5 32 107-138 238-269 (527)
37 2ie4_C PP2A-alpha;, serine/thr 99.0 1.4E-08 4.9E-13 82.5 15.4 63 2-67 50-121 (309)
38 3icf_A PPT, serine/threonine-p 99.0 4.8E-09 1.6E-13 86.0 12.1 115 2-122 64-262 (335)
39 2z1a_A 5'-nucleotidase; metal- 98.9 2.7E-08 9.2E-13 86.9 14.8 65 2-67 30-119 (552)
40 3e7a_A PP-1A, serine/threonine 98.9 1.5E-08 5E-13 81.9 12.1 114 2-121 56-252 (299)
41 3ive_A Nucleotidase; structura 98.9 5.8E-08 2E-12 84.0 16.6 32 107-138 224-257 (509)
42 2wdc_A SOXB, sulfur oxidation 98.8 3.8E-07 1.3E-11 79.8 19.1 119 32-161 123-324 (562)
43 1aui_A Calcineurin, serine/thr 98.8 4.7E-08 1.6E-12 83.9 12.5 63 2-67 83-154 (521)
44 1fjm_A Protein serine/threonin 98.8 8.9E-09 3.1E-13 84.4 7.2 63 2-67 57-128 (330)
45 3ztv_A NAD nucleotidase, NADN; 98.8 2.5E-07 8.5E-12 81.2 16.6 66 2-68 13-107 (579)
46 3e0j_A DNA polymerase subunit 98.6 3.3E-07 1.1E-11 78.1 12.4 149 3-160 202-453 (476)
47 3ll8_A Serine/threonine-protei 98.6 3.7E-08 1.3E-12 81.2 6.1 63 2-67 70-141 (357)
48 4h2g_A 5'-nucleotidase; dimer, 98.6 1.3E-06 4.5E-11 76.1 15.4 64 2-67 26-118 (546)
49 3jyf_A 2',3'-cyclic nucleotide 98.6 1.8E-06 6.2E-11 71.0 14.8 34 105-138 231-278 (339)
50 3gve_A YFKN protein; alpha-bet 98.5 3E-06 1E-10 69.7 14.1 33 106-138 239-285 (341)
51 4h1s_A 5'-nucleotidase; hydrol 98.5 5E-06 1.7E-10 72.1 15.0 65 2-68 4-97 (530)
52 2yeq_A Apased, PHOD, alkaline 98.3 4.5E-05 1.5E-09 66.2 18.3 72 99-170 361-461 (527)
53 3c9f_A 5'-nucleotidase; 2',3'- 98.2 3.4E-05 1.2E-09 67.3 14.7 65 2-67 16-107 (557)
54 1t71_A Phosphatase, conserved 98.2 1.5E-06 5.1E-11 69.6 5.5 126 2-132 5-202 (281)
55 3flo_A DNA polymerase alpha su 97.9 0.00067 2.3E-08 57.6 16.5 48 107-159 381-428 (460)
56 1t70_A Phosphatase; crystal, X 97.6 0.00022 7.6E-09 56.2 8.6 128 2-132 1-192 (255)
57 2z06_A Putative uncharacterize 97.5 0.00081 2.8E-08 52.8 10.1 128 2-132 1-189 (252)
58 3aon_B V-type sodium ATPase su 86.3 0.38 1.3E-05 32.9 2.2 65 1-66 2-82 (115)
59 2d00_A V-type ATP synthase sub 86.0 0.42 1.4E-05 32.3 2.3 64 2-65 4-84 (109)
60 2ov6_A V-type ATP synthase sub 76.5 0.96 3.3E-05 30.0 1.3 63 2-64 1-81 (101)
61 2vvr_A Ribose-5-phosphate isom 55.8 6.5 0.00022 28.0 2.3 34 1-39 1-34 (149)
62 2r7a_A Bacterial heme binding 52.6 20 0.0007 26.8 4.9 34 29-62 57-90 (256)
63 3sk3_A Acetate kinase, acetoki 50.7 9.9 0.00034 31.7 2.9 36 114-160 6-42 (415)
64 3md9_A Hemin-binding periplasm 49.4 25 0.00084 26.3 4.9 34 29-62 57-90 (255)
65 4hwg_A UDP-N-acetylglucosamine 47.1 14 0.00048 30.1 3.3 42 22-63 85-126 (385)
66 2r79_A Periplasmic binding pro 46.6 29 0.00099 26.5 4.9 34 29-62 57-90 (283)
67 1n2z_A Vitamin B12 transport p 42.4 31 0.001 25.7 4.4 34 29-62 55-88 (245)
68 3jyw_G 60S ribosomal protein L 36.2 69 0.0023 21.4 4.9 47 21-67 31-81 (113)
69 3v7e_A Ribosome-associated pro 35.5 78 0.0027 19.5 4.9 44 22-66 18-65 (82)
70 2xzm_U Ribosomal protein L7AE 34.8 56 0.0019 22.2 4.3 46 22-67 31-80 (126)
71 2pln_A HP1043, response regula 33.1 49 0.0017 21.4 3.9 37 28-65 59-97 (137)
72 3cpq_A 50S ribosomal protein L 32.3 1.1E+02 0.0036 20.0 5.5 44 22-66 28-75 (110)
73 3f6c_A Positive transcription 32.0 92 0.0032 19.8 5.1 11 1-11 1-11 (134)
74 3hcw_A Maltose operon transcri 31.2 82 0.0028 23.7 5.3 41 23-63 60-100 (295)
75 3psh_A Protein HI_1472; substr 30.9 56 0.0019 25.4 4.3 35 29-64 82-116 (326)
76 2e1z_A Propionate kinase; TDCD 30.5 24 0.00081 29.4 2.1 25 124-159 16-40 (415)
77 3j21_Z 50S ribosomal protein L 30.1 93 0.0032 19.8 4.7 45 22-67 22-70 (99)
78 3k7p_A Ribose 5-phosphate isom 29.8 28 0.00096 25.5 2.2 34 2-40 23-58 (179)
79 4em8_A Ribose 5-phosphate isom 29.8 16 0.00054 25.9 0.8 34 1-39 7-40 (148)
80 3k4h_A Putative transcriptiona 29.6 83 0.0028 23.4 5.1 41 23-63 61-101 (292)
81 3dnf_A ISPH, LYTB, 4-hydroxy-3 29.6 43 0.0015 26.5 3.4 78 32-122 31-127 (297)
82 4a17_F RPL7A, 60S ribosomal pr 29.5 1.1E+02 0.0038 23.6 5.6 46 22-67 131-180 (255)
83 2lbw_A H/ACA ribonucleoprotein 29.3 60 0.0021 21.7 3.7 45 23-67 28-76 (121)
84 3w01_A Heptaprenylglyceryl pho 28.5 1.3E+02 0.0043 22.9 5.8 46 21-67 27-77 (235)
85 3ot5_A UDP-N-acetylglucosamine 28.4 36 0.0012 27.7 2.9 41 22-62 105-146 (403)
86 3huu_A Transcription regulator 28.2 89 0.0031 23.6 5.1 41 23-63 75-115 (305)
87 1w41_A 50S ribosomal protein L 27.9 1.2E+02 0.0041 19.3 5.1 43 22-65 23-70 (101)
88 1ilo_A Conserved hypothetical 27.8 89 0.0031 17.8 4.4 10 1-10 1-10 (77)
89 2vqe_B 30S ribosomal protein S 27.4 88 0.003 24.1 4.7 38 30-67 157-208 (256)
90 3gv0_A Transcriptional regulat 27.3 73 0.0025 23.8 4.4 39 23-61 58-96 (288)
91 2i4r_A V-type ATP synthase sub 27.1 44 0.0015 21.9 2.6 48 19-66 41-92 (102)
92 2vvp_A Ribose-5-phosphate isom 26.6 12 0.00041 27.0 -0.3 34 1-39 3-36 (162)
93 3dzc_A UDP-N-acetylglucosamine 26.5 40 0.0014 27.2 2.9 41 22-62 102-143 (396)
94 2kqs_B Death domain-associated 26.0 27 0.00093 16.9 1.0 11 2-12 13-23 (26)
95 3bbn_B Ribosomal protein S2; s 25.4 1.1E+02 0.0039 23.1 5.0 27 31-57 157-183 (231)
96 3iz5_H 60S ribosomal protein L 25.2 1.4E+02 0.0047 23.1 5.4 46 22-67 134-183 (258)
97 3jy6_A Transcriptional regulat 25.0 1.2E+02 0.0042 22.3 5.3 38 23-61 55-92 (276)
98 3kke_A LACI family transcripti 24.5 1.7E+02 0.0057 22.0 6.0 39 23-62 63-102 (303)
99 3qk7_A Transcriptional regulat 24.5 90 0.0031 23.4 4.4 41 22-62 56-96 (294)
100 2lpm_A Two-component response 24.2 78 0.0027 21.1 3.5 42 24-67 46-92 (123)
101 3h75_A Periplasmic sugar-bindi 24.1 87 0.003 24.3 4.4 41 22-62 52-94 (350)
102 4hn9_A Iron complex transport 23.6 58 0.002 25.5 3.2 31 29-61 114-144 (335)
103 2ebj_A Pyrrolidone carboxyl pe 23.5 40 0.0014 24.8 2.0 21 20-40 46-66 (192)
104 4e7p_A Response regulator; DNA 23.5 1.6E+02 0.0054 19.2 6.0 41 26-66 61-106 (150)
105 3c48_A Predicted glycosyltrans 23.4 32 0.0011 27.5 1.7 12 1-12 20-31 (438)
106 3hdg_A Uncharacterized protein 23.1 1.1E+02 0.0037 19.6 4.2 38 28-65 48-90 (137)
107 3iz5_f 60S ribosomal protein L 23.1 1.5E+02 0.0052 19.5 4.8 45 22-67 33-81 (112)
108 2yq5_A D-isomer specific 2-hyd 22.5 1.3E+02 0.0043 24.1 5.0 33 30-62 44-78 (343)
109 3nhm_A Response regulator; pro 22.5 1.5E+02 0.0052 18.6 5.0 41 26-66 42-89 (133)
110 3eod_A Protein HNR; response r 22.4 1.5E+02 0.0052 18.6 5.8 41 26-66 46-91 (130)
111 3d8u_A PURR transcriptional re 22.2 1.4E+02 0.0047 21.9 5.0 35 27-61 55-89 (275)
112 3tlk_A Ferrienterobactin-bindi 21.7 1E+02 0.0035 23.9 4.3 34 29-63 113-148 (326)
113 1p2f_A Response regulator; DRR 21.7 2.2E+02 0.0074 20.1 6.4 37 30-66 42-83 (220)
114 3vzx_A Heptaprenylglyceryl pho 21.5 1.7E+02 0.0057 22.1 5.2 40 28-67 28-72 (228)
115 1rdu_A Conserved hypothetical 21.5 38 0.0013 22.2 1.5 30 102-131 56-87 (116)
116 3giu_A Pyrrolidone-carboxylate 21.4 34 0.0012 25.7 1.3 20 21-40 52-71 (215)
117 3h5t_A Transcriptional regulat 20.9 1.2E+02 0.0042 23.5 4.7 41 21-61 118-158 (366)
118 2jnb_A NHP2-like protein 1; sp 20.9 58 0.002 22.8 2.4 44 24-67 59-106 (144)
119 2hqr_A Putative transcriptiona 20.9 1.6E+02 0.0054 20.9 5.0 42 24-66 37-80 (223)
120 2iuy_A Avigt4, glycosyltransfe 20.6 36 0.0012 26.3 1.4 64 1-64 3-94 (342)
121 2ale_A SNU13, NHP2/L7AE family 20.6 1.4E+02 0.0047 20.4 4.3 45 23-67 40-88 (134)
No 1
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=100.00 E-value=5.4e-39 Score=246.11 Aligned_cols=183 Identities=64% Similarity=1.141 Sum_probs=161.8
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCCcccccCCCCceEEEECC
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQ 80 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~~~p~~~~~~~~~ 80 (190)
||||+++||+|++.....+.+.+.+++++.++|.|+++||+++.++++.|+++..++++|+||||....+|....++.++
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~~~~~~l~~~~~~~~~v~GNhD~~~~lp~~~~~~~~~ 89 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQ 89 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSHHHHHHHHHHCSEEEECCCTTCCCTTSCSEEEEEETT
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCHHHHHHHHhcCCCEEEEcCCcCccccCCcceEEEECC
Confidence 89999999999865444556777777767789999999999999999999998878999999999988899888899999
Q ss_pred EEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCe
Q 029615 81 FKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLR 160 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~ 160 (190)
++|+++||+++.++.+++.+..+++..+++++++||+|.+.....+++.++||||++.++.+++....++|+++++++++
T Consensus 90 ~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~~ 169 (192)
T 1z2w_A 90 FKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQAST 169 (192)
T ss_dssp EEEEEECSCCCCBTTCHHHHHHHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTE
T ss_pred EEEEEECCCcCCCCCCHHHHHHHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCCcCCCCcEEEEEEECCE
Confidence 99999999998877777888777777899999999999999888899999999999876555556678999999999999
Q ss_pred EEEEEEEeeCCeEEEEEEEEeeC
Q 029615 161 VVVYVYELIDGEVKVDKIDFKKT 183 (190)
Q Consensus 161 ~~~~~~~i~~~~~~~~~~~~~~~ 183 (190)
++++++++..+++.+.+++|+|+
T Consensus 170 ~~~~~~~~~~~~~~v~~~~~~~~ 192 (192)
T 1z2w_A 170 VVTYVYQLIGDDVKVERIEYKKS 192 (192)
T ss_dssp EEEEEEEEETTEEEEEEEEEECC
T ss_pred EEEEEEEccCCEEEEEEEEEccC
Confidence 99999999999999999999874
No 2
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=100.00 E-value=2.1e-37 Score=241.40 Aligned_cols=181 Identities=48% Similarity=0.869 Sum_probs=157.4
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCCccccc---------CCCC
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEET---------RYPE 72 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~---------~~p~ 72 (190)
|||+++||+|++.....+.+.+.+++++.++|.|+++||+++.++++.|+++..|+++|+||||... .+|.
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~~~l~~l~~~~~~v~~V~GNHD~~~~~~~~~~~~~lp~ 105 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQEYVEMLKNITKNVYIVSGDLDSAIFNPDPESNGVFPE 105 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCHHHHHHHHHHCSCEEECCCTTCCSCCBCCGGGTBCCCS
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHHcCCCEEEecCCCcCcccccChhhHhhCCc
Confidence 9999999999865433444556666666789999999999999999999998878999999999865 4677
Q ss_pred ceEEEECCEEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEE
Q 029615 73 TKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFV 152 (190)
Q Consensus 73 ~~~~~~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ 152 (190)
...++.++.+|+++||+++.++.+.+.+.++++..+++++++||+|.+.....+++.++||||++.++.+++....++|+
T Consensus 106 ~~~~~~~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~ 185 (215)
T 2a22_A 106 YVVVQIGEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAPPSFM 185 (215)
T ss_dssp EEEEEETTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTSTTCCCEEE
T ss_pred eEEEecCCeEEEEEcCCccCCCCCHHHHHHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCCCCCCCcEE
Confidence 77788899999999999988877778887777777999999999999998888999999999998765555666789999
Q ss_pred EEEEeCCeEEEEEEEeeCCeEEEEEEEEee
Q 029615 153 LMDIDGLRVVVYVYELIDGEVKVDKIDFKK 182 (190)
Q Consensus 153 ll~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 182 (190)
++++++++++++++++.++++++.+++|.|
T Consensus 186 il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 186 LMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp EEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 999999999999999999999999999976
No 3
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=100.00 E-value=9.5e-33 Score=208.54 Aligned_cols=170 Identities=17% Similarity=0.186 Sum_probs=136.3
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCCcccccCCCCceEEEECC
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQ 80 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~~~p~~~~~~~~~ 80 (190)
||||+++||+|++. ...+++.+.+++ ++|.|+++||+.. +.++++..++++|+||||....+|....++.++
T Consensus 6 ~m~i~~isD~H~~~---~~~~~~~~~~~~-~~d~i~~~GD~~~----~~l~~l~~~~~~v~GNhD~~~~~p~~~~~~~~~ 77 (176)
T 3ck2_A 6 KQTIIVMSDSHGDS---LIVEEVRDRYVG-KVDAVFHNGDSEL----RPDSPLWEGIRVVKGNMDFYAGYPERLVTELGS 77 (176)
T ss_dssp CEEEEEECCCTTCH---HHHHHHHHHHTT-TSSEEEECSCCCS----CTTCGGGTTEEECCCTTCCSTTCCSEEEEEETT
T ss_pred CcEEEEEecCCCCH---HHHHHHHHHhhc-CCCEEEECCCCch----HHHHhhhCCeEEecCcccchhcCCcEEEEEECC
Confidence 59999999999732 112334444444 8999999999743 233444347999999999988899888889999
Q ss_pred EEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCe
Q 029615 81 FKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLR 160 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~ 160 (190)
.+|+++||+++.++.+.+.+.++++..+++++++||+|.+...+.+++.++||||++.+ ++..+.++|+++++++++
T Consensus 78 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~---~~~~~~~~y~il~~~~~~ 154 (176)
T 3ck2_A 78 TKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQP---RGTIRECLYARVEIDDSY 154 (176)
T ss_dssp EEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSC---CTTCCSCCEEEEEECSSE
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcC---CCCCCCCeEEEEEEcCCE
Confidence 99999999988766667778777778899999999999999988899999999999975 233344899999999999
Q ss_pred EEEEEEEeeCCeEEEEEEEEe
Q 029615 161 VVVYVYELIDGEVKVDKIDFK 181 (190)
Q Consensus 161 ~~~~~~~i~~~~~~~~~~~~~ 181 (190)
++++++++.+..+......|.
T Consensus 155 ~~v~~~~~~~~~~~~~~~~~~ 175 (176)
T 3ck2_A 155 FKVDFLTRDHEVYPGLSKEFS 175 (176)
T ss_dssp EEEEEECTTSCBCTTCCEEEE
T ss_pred EEEEEEEECCEEcchhhcccc
Confidence 999999998777665555554
No 4
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=100.00 E-value=9.9e-32 Score=203.69 Aligned_cols=154 Identities=25% Similarity=0.421 Sum_probs=124.7
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCCcccc---cCCCCceEEE
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEE---TRYPETKTLT 77 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~---~~~p~~~~~~ 77 (190)
||||+++||+|+......+.+.+.++. .++|.|+++||+++.++++.|+++..|+++|+||||.. ..+|....++
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~--~~~D~ii~~GD~~~~~~~~~l~~~~~~v~~V~GNhD~~~~~~~lp~~~~~~ 99 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL--KEYDGVIGLGDYVDLDTVILLEKFSKEFYGVHGNMDYPDVKEHLPFSKVLL 99 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG--GGCSEEEESSCBSCHHHHHHHHHHTSSEEECCCSSSCGGGGGTSCSCEEEE
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh--cCCCEEEECCCCCCHHHHHHHHhcCCCEEEEECCCCcHHHHhhCCcceEEE
Confidence 899999999996333345555555544 68999999999999999999999877899999999984 3688888899
Q ss_pred ECCEEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEe
Q 029615 78 IGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDID 157 (190)
Q Consensus 78 ~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~ 157 (190)
+++.+|+++||++. +....+.+.+..+ .+++++++||+|.+...+.+++.++||||++. ++|++++++
T Consensus 100 ~~g~~i~l~HG~~~-~~~~~~~~~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~----------~sy~il~~~ 167 (178)
T 2kkn_A 100 VEGVTIGMCHGWGA-PWDLKDRLLKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE----------GSYAVLELD 167 (178)
T ss_dssp ETTEEEEECCSCCC-HHHHHHHHHHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT----------TEEEEEEEE
T ss_pred ECCEEEEEECCCCC-CCCHHHHHHHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC----------CeEEEEEEC
Confidence 99999999999753 1111112222223 68999999999999988889999999999883 799999999
Q ss_pred CCeEEEEEEEe
Q 029615 158 GLRVVVYVYEL 168 (190)
Q Consensus 158 ~~~~~~~~~~i 168 (190)
+++++++++++
T Consensus 168 ~~~~~~~~~~l 178 (178)
T 2kkn_A 168 GGEVRFELKTL 178 (178)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 99999988764
No 5
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.96 E-value=6.8e-29 Score=199.49 Aligned_cols=165 Identities=19% Similarity=0.294 Sum_probs=128.7
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEecCCccccc-------
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKIICPDLHIIRGEYDEET------- 68 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~------- 68 (190)
|+||+++||+|++. ..+ +++.+.+++.++|.|+++||+++ .++++.|+++. ++++|+||||...
T Consensus 11 ~~~i~~iSDiHg~~--~~l-~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~~~ 86 (270)
T 3qfm_A 11 MTKIALLSDIHGNT--TAL-EAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-ITARVLGNWEDSLWHGVRKE 86 (270)
T ss_dssp CEEEEEECCCTTCH--HHH-HHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-EEEECCCHHHHHHHHHHTTC
T ss_pred ccEEEEEecCCCCH--HHH-HHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-CEEEEcCChHHHHHHhhccc
Confidence 78999999999842 123 23333344568999999999998 47888998874 6899999999862
Q ss_pred -------------------------------CCCCceEEEECCEEEEEeecCccCCC-------CCHHHHHHHhhcCCcc
Q 029615 69 -------------------------------RYPETKTLTIGQFKLGLCHGHQVIPW-------GDLDSLAMLQRQLDVD 110 (190)
Q Consensus 69 -------------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~-------~~~~~l~~~~~~~~~~ 110 (190)
.+|....++.++.+|+++||++..++ ...+.+..+++..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d 166 (270)
T 3qfm_A 87 LDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCD 166 (270)
T ss_dssp SCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCS
T ss_pred cCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCC
Confidence 35666677889999999999875432 2345677777778999
Q ss_pred EEEECcccCcceEEe-cCeEEEccCCCcCCCCCCC---CCCCCcEEEEEEeCCe-EEEEEEEee
Q 029615 111 ILVTGHTHQFTAYKH-EGGVVINPGSATGAFSSIT---YDVNPSFVLMDIDGLR-VVVYVYELI 169 (190)
Q Consensus 111 ~~i~GH~H~~~~~~~-~~~~~inpGs~~~~~~~~~---~~~~~~y~ll~~~~~~-~~~~~~~i~ 169 (190)
+++|||||.+..... +++.++||||++.++.+.+ ..+.++|+++++++++ ++++++.+.
T Consensus 167 ~~i~GHtH~~~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~~~rv~ 230 (270)
T 3qfm_A 167 IAVYGHIHQQLLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRVD 230 (270)
T ss_dssp EEECCSSCSEEEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEECCcCchHheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEEEEEeC
Confidence 999999999988774 7899999999998743211 1457899999999886 689999885
No 6
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.96 E-value=8.7e-29 Score=189.28 Aligned_cols=148 Identities=18% Similarity=0.265 Sum_probs=113.5
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCCcccccC------CC---
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETR------YP--- 71 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~~------~p--- 71 (190)
||||+++||+|++. ..+ +++.+.+++.++|.|+++||++++++++.|+++..++++|+||||.... .|
T Consensus 25 ~m~i~~iSD~Hg~~--~~l-~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l~~l~~~~~~V~GNhD~~~~~~~~~~~~~~~ 101 (190)
T 1s3l_A 25 HMKIGIMSDTHDHL--PNI-RKAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERCKLKEWLKDINE 101 (190)
T ss_dssp -CEEEEECCCTTCH--HHH-HHHHHHHHHSCCSEEEECSCCCSTHHHHHGGGCSSEEEEECCTTCCCHHHHHHHHHHHCT
T ss_pred CeEEEEEeeCCCCH--HHH-HHHHHHHhhcCCCEEEECCCCCCHHHHHHHHhcCCCEEEEeCCCcchHHHHHHHhcccCh
Confidence 79999999999732 122 3333444457899999999999988888888876789999999998642 11
Q ss_pred -----CceEEEECCEEEEEeecCccCCCCCHHHHHHHhhcC-CccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCC
Q 029615 72 -----ETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQL-DVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITY 145 (190)
Q Consensus 72 -----~~~~~~~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~-~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~ 145 (190)
....++.++.+|+++||++.. +.+.+++. +++++++||+|.+...+.+++.++||||++. + .
T Consensus 102 ~~l~~~~~~~~~~~~~ill~Hg~~~~-------l~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r----~ 169 (190)
T 1s3l_A 102 ENIIDDFISVEIDDLKFFITHGHHQS-------VLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-Y----L 169 (190)
T ss_dssp TCEEESEEEEEETTEEEEEEESCCHH-------HHHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-T----T
T ss_pred hhhcccceEEeeCCcEEEEECCChHH-------HHHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-c----C
Confidence 124567789999999997642 33334444 8999999999999998889999999999986 3 2
Q ss_pred CCCCcEEEEEEeCCeEEE
Q 029615 146 DVNPSFVLMDIDGLRVVV 163 (190)
Q Consensus 146 ~~~~~y~ll~~~~~~~~~ 163 (190)
..+++|++++++++++++
T Consensus 170 ~~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 170 TGIPTIGILDTEKKEYRE 187 (190)
T ss_dssp TSCCEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEcCCCcEEE
Confidence 346999999998875543
No 7
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.95 E-value=1.5e-27 Score=188.82 Aligned_cols=160 Identities=24% Similarity=0.288 Sum_probs=117.9
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhc---CC--CccEEEEcCCCCC-----HHHHHHHhhhC--CcEEEecCCccccc
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLV---PG--KIQHIVCTGNLCI-----KEVHDYLKIIC--PDLHIIRGEYDEET 68 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~---~~--~~D~vi~~GDl~~-----~~~~~~l~~l~--~~~~~v~GNHD~~~ 68 (190)
||||+++||+|++.. .+ +++.+.++ +. ++|.|+++||+++ .++++.|+++. .++++|+||||...
T Consensus 1 mm~i~~isD~H~~~~--~l-~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~~ 77 (252)
T 1nnw_A 1 MVYVAVLANIAGNLP--AL-TAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQII 77 (252)
T ss_dssp -CEEEEEECCTTCHH--HH-HHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHH
T ss_pred CcEEEEEeecCCCHH--HH-HHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHHh
Confidence 999999999998421 22 22333333 44 7999999999997 36778887764 57999999999753
Q ss_pred ------------------------------------------CCCCceEEEECCEEEEEeecCccCCC-------CCHHH
Q 029615 69 ------------------------------------------RYPETKTLTIGQFKLGLCHGHQVIPW-------GDLDS 99 (190)
Q Consensus 69 ------------------------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~-------~~~~~ 99 (190)
.+|.....+.++.+|+++|+++..+. ...+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~ 157 (252)
T 1nnw_A 78 AMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSY 157 (252)
T ss_dssp HHSCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHH
T ss_pred hccccccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHH
Confidence 13444455668899999999874221 12356
Q ss_pred HHHHhhcC-CccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeEEEEEEEe
Q 029615 100 LAMLQRQL-DVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYEL 168 (190)
Q Consensus 100 l~~~~~~~-~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~~~~~~~i 168 (190)
+.++++.. ++++++|||+|.+.....+++.++||||++.+ +++.+.++|+++++++.. ++++.+
T Consensus 158 l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~in~Gs~~~~---~~~~~~~~y~il~~~~~~--v~~~~v 222 (252)
T 1nnw_A 158 YEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFP---PGKEHKATFALVDVDTLK--PKFIEV 222 (252)
T ss_dssp HHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSSC---SSSSCCEEEEEEETTTCC--EEEEEE
T ss_pred HHHHHhcCCCCCEEEECCccccceEecCCeEEEECCCccCC---CCCCCcceEEEEECCCCe--EEEEEe
Confidence 76777776 89999999999999988899999999999975 344567899999987744 444444
No 8
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.95 E-value=2.9e-27 Score=183.19 Aligned_cols=159 Identities=25% Similarity=0.312 Sum_probs=117.4
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-------------HHHHHHHhhhCCcEEEecCCcccc
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-------------KEVHDYLKIICPDLHIIRGEYDEE 67 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-------------~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
||||+++||+|++. ...+++.+.+++.++|.|+++||+++ .++++.|+++..++++|+||||..
T Consensus 25 mmki~~iSD~H~~~---~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 25 MMKLMFASDIHGSL---PATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 101 (208)
T ss_dssp CCEEEEECCCTTBH---HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred cEEEEEEEcCCCCH---HHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCchH
Confidence 89999999999842 12233444444468999999999985 356778887766899999999986
Q ss_pred c-----CCC---CceEEEECCEEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCC
Q 029615 68 T-----RYP---ETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGA 139 (190)
Q Consensus 68 ~-----~~p---~~~~~~~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~ 139 (190)
. .+| ....++.++.+|+++||++..+. .+..+ ...+++++||+|.+.....+++.++||||++.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~~i~l~Hg~~~~~~----~l~~~---~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~p 174 (208)
T 1su1_A 102 VDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPE----NLPAL---NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIP 174 (208)
T ss_dssp HHHHHSSSCCCCSEEEEECSSCEEEEECSSSSBTT----BCCCC---CTTCEEECCSSCCCEEEEETTEEEEECCCSSCC
T ss_pred HHHhhhhccccCceEEEEECCcEEEEECCCCCCcc----hhhhh---cCCCEEEECCcccCccEEeCCEEEEECCCCcCC
Confidence 3 344 34567788999999999886431 11111 245899999999999888899999999999975
Q ss_pred CCCCCCCCCCcEEEEEEeCCeEEEEEEEeeCCeEEEEE
Q 029615 140 FSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDK 177 (190)
Q Consensus 140 ~~~~~~~~~~~y~ll~~~~~~~~~~~~~i~~~~~~~~~ 177 (190)
+ + ..+++|++++. + +++++++++.++....
T Consensus 175 r---~-~~~~sy~il~~--~--~~~~~~~~~~~~~~~~ 204 (208)
T 1su1_A 175 K---G-GNPASYGMLDN--D--VLSVIALNDQSIIAQV 204 (208)
T ss_dssp C---T-TCCCEEEEEET--T--EEEEEETTTCCEEEEE
T ss_pred C---C-CCCCEEEEEEC--C--eEEEEEeCCCEEEEEe
Confidence 2 2 34689999994 3 5778888766555443
No 9
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.93 E-value=9.7e-26 Score=178.46 Aligned_cols=156 Identities=19% Similarity=0.250 Sum_probs=113.8
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEecCCcccccCC--CC-
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKIICPDLHIIRGEYDEETRY--PE- 72 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~~~--p~- 72 (190)
||||+++||+|++. ..+ +++.+.+. ++|.|+++||+++ .++++.|+++.. +++|+||||..... +.
T Consensus 3 ~mri~~isDiHg~~--~~l-~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~~-~~~v~GNhD~~~~~~~~~~ 76 (246)
T 3rqz_A 3 AMRILIISDVHANL--VAL-EAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLAP-NISVIGNHDWACIGRLSLD 76 (246)
T ss_dssp CCCEEEECCCTTCH--HHH-HHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHCS-SEECCCHHHHHHTCCCCCC
T ss_pred CcEEEEEeecCCCH--HHH-HHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcCC-CEEEeCchHHHHhccCCcc
Confidence 79999999999742 122 23333333 9999999999998 567888888753 79999999987410 00
Q ss_pred ----------------------------ceEEEECCEEEEEeecCccCCC----CCHHHHHHHhhcCCccEEEECcccCc
Q 029615 73 ----------------------------TKTLTIGQFKLGLCHGHQVIPW----GDLDSLAMLQRQLDVDILVTGHTHQF 120 (190)
Q Consensus 73 ----------------------------~~~~~~~~~~i~~~Hg~~~~~~----~~~~~l~~~~~~~~~~~~i~GH~H~~ 120 (190)
......+ +++++||.+..+. .....+.+.++..++++++|||||.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~--~i~~~Hg~p~~~~~~~~~~~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 77 EFNPVARFASYWTTMQLQAEHLQYLESLPNRMIDG--DWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp --CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEET--TEEEESSCSSSTTTCCCCSHHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ccCHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEEC--CEEEEECCcCCccccccCChHHHHHHHhccCCCEEEECCcCcc
Confidence 0112223 6999999886543 23455666777889999999999999
Q ss_pred ceEEe---------------------cCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeEEEEEEEee
Q 029615 121 TAYKH---------------------EGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELI 169 (190)
Q Consensus 121 ~~~~~---------------------~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~~~~~~~i~ 169 (190)
..... ++..++||||+|.| +++.+.++|++++.+++ +++++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~P---rdg~p~A~Y~i~d~~~~--~v~~~rv~ 219 (246)
T 3rqz_A 155 LYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQP---RDGDPRASYAIFEPDAQ--RVTFHRVE 219 (246)
T ss_dssp EEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCC---CSSCCSEEEEEEEGGGT--EEEEEEEC
T ss_pred cEEEecccccccccccccccceeecCCCeEEEECCccCCC---CCcCCcceEEEEECCCC--EEEEEEeC
Confidence 87662 36899999999985 56777889999998876 45555553
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.93 E-value=4e-25 Score=171.28 Aligned_cols=152 Identities=16% Similarity=0.089 Sum_probs=108.3
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCH--------HHHHHHhhhCCcEEEecCCcccccC---
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIK--------EVHDYLKIICPDLHIIRGEYDEETR--- 69 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~--------~~~~~l~~l~~~~~~v~GNHD~~~~--- 69 (190)
||||+++||+|++. ...+++.+.+++.++|.|+++||+++. +.++.|++++.|+++|+||||....
T Consensus 5 ~mri~~iSD~H~~~---~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~~~~ 81 (228)
T 1uf3_A 5 VRYILATSNPMGDL---EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYL 81 (228)
T ss_dssp CCEEEEEECCTTCH---HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHH
T ss_pred eEEEEEEeeccCCH---HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhHHHH
Confidence 48999999999842 112334444444589999999999972 3566777777789999999997531
Q ss_pred ---------CCCc-----eEEEE-------------------------------------------CCEEEEEeecCccC
Q 029615 70 ---------YPET-----KTLTI-------------------------------------------GQFKLGLCHGHQVI 92 (190)
Q Consensus 70 ---------~p~~-----~~~~~-------------------------------------------~~~~i~~~Hg~~~~ 92 (190)
.|.. ....+ ++.+|+++|+++..
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~~~ 161 (228)
T 1uf3_A 82 REAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYH 161 (228)
T ss_dssp HHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCB
T ss_pred HhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCCCCeEEEEccCccc
Confidence 0100 00010 24689999998764
Q ss_pred C---CCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeEEEEEEEe
Q 029615 93 P---WGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYEL 168 (190)
Q Consensus 93 ~---~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~~~~~~~i 168 (190)
. ..+.+.+.+++++.+++++++||+| +.....+++.++||||++ .++|+++++++ .+++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~GH~H-~~~~~~~~~~~in~Gs~~----------~~~~~i~~~~~--~~~~~~~v 227 (228)
T 1uf3_A 162 KGLNEQGSHEVAHLIKTHNPLLVLVAGKG-QKHEMLGASWVVVPGDLS----------EGEYSLLDLRA--RKLETGNV 227 (228)
T ss_dssp TTTBTTSBHHHHHHHHHHCCSEEEECCSS-CEEEEETTEEEEECCBGG----------GTEEEEEETTT--TEEEEEEC
T ss_pred CCccccCHHHHHHHHHHhCCCEEEEcccc-cCccccCCceEEEecccC----------CCceEEEEecc--eEeeeccc
Confidence 2 2344556667777799999999999 656677889999999987 26999999876 56666654
No 11
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.92 E-value=1.1e-23 Score=171.83 Aligned_cols=170 Identities=20% Similarity=0.184 Sum_probs=118.1
Q ss_pred eEEEEEecCCCCCCCC------ChHH---HHHhhhcC--CCccEEEEcCCCCC---H----HHHHHHhh----hCCcEEE
Q 029615 2 VLVLALGDLHIPHRAA------DLPA---KFKSMLVP--GKIQHIVCTGNLCI---K----EVHDYLKI----ICPDLHI 59 (190)
Q Consensus 2 mri~~iSD~H~~~~~~------~~~~---~l~~~~~~--~~~D~vi~~GDl~~---~----~~~~~l~~----l~~~~~~ 59 (190)
|||+++||+|++.... ...+ ++.+.+++ .++|+|+++||+++ . ...+.+++ +..|+++
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~ 105 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVW 105 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 8999999999753221 1122 23333333 79999999999998 2 22334433 3679999
Q ss_pred ecCCcccccC------------CCCceEEEECCE------------------------------------EEEEeecCcc
Q 029615 60 IRGEYDEETR------------YPETKTLTIGQF------------------------------------KLGLCHGHQV 91 (190)
Q Consensus 60 v~GNHD~~~~------------~p~~~~~~~~~~------------------------------------~i~~~Hg~~~ 91 (190)
|+||||.... -+....++.++. +|+++|+++.
T Consensus 106 v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~~~~~~~iv~~Hh~p~ 185 (330)
T 3ib7_A 106 VMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPI 185 (330)
T ss_dssp CCCTTSCHHHHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSCCTTCEEEECSSCSS
T ss_pred eCCCCCCHHHHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHHhcccCCeEEEEECCCC
Confidence 9999996421 111223333333 5677887765
Q ss_pred CCC---------CCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCC-------CCCCCCCcEEEEE
Q 029615 92 IPW---------GDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSS-------ITYDVNPSFVLMD 155 (190)
Q Consensus 92 ~~~---------~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~-------~~~~~~~~y~ll~ 155 (190)
... .+.+.+.+++++.+++++++||+|.+.....+++.++++||.+....+ ......++|++++
T Consensus 186 ~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~ 265 (330)
T 3ib7_A 186 PSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVH 265 (330)
T ss_dssp CCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEE
T ss_pred CCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEE
Confidence 321 234567778888899999999999999988999999999999853221 1124567899999
Q ss_pred EeCCeEEEEEEEeeCC
Q 029615 156 IDGLRVVVYVYELIDG 171 (190)
Q Consensus 156 ~~~~~~~~~~~~i~~~ 171 (190)
+++++++++++++...
T Consensus 266 i~~~~~~~~~v~~~~~ 281 (330)
T 3ib7_A 266 VYPDTVVHSVIPLGGG 281 (330)
T ss_dssp ECSSCEEEEEEECSCC
T ss_pred EECCCeEEEEeccCCC
Confidence 9999999999998643
No 12
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.91 E-value=1.4e-23 Score=166.89 Aligned_cols=168 Identities=17% Similarity=0.173 Sum_probs=116.5
Q ss_pred eEEEEEecCCCCCCCC------ChHHHHHh---hhcC--CCccEEEEcCCCCC---H----HHHHHHhhhCCcEEEecCC
Q 029615 2 VLVLALGDLHIPHRAA------DLPAKFKS---MLVP--GKIQHIVCTGNLCI---K----EVHDYLKIICPDLHIIRGE 63 (190)
Q Consensus 2 mri~~iSD~H~~~~~~------~~~~~l~~---~~~~--~~~D~vi~~GDl~~---~----~~~~~l~~l~~~~~~v~GN 63 (190)
|||+++||+|++.... ...+.+.+ .+++ .++|+|+++||+++ . .+.+.|+++..|+++|+||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 8999999999864210 11122332 2333 36899999999997 2 3345666776789999999
Q ss_pred cccccCC-----------CC-----ceEEE------------------------------------ECCEEEEEeecCcc
Q 029615 64 YDEETRY-----------PE-----TKTLT------------------------------------IGQFKLGLCHGHQV 91 (190)
Q Consensus 64 HD~~~~~-----------p~-----~~~~~------------------------------------~~~~~i~~~Hg~~~ 91 (190)
||....+ +. ...++ .++.+|+++|++++
T Consensus 81 HD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~iv~~H~p~~ 160 (274)
T 3d03_A 81 HDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPL 160 (274)
T ss_dssp TSCHHHHHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSS
T ss_pred CCCHHHHHHHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCCCCCEEEEECCCCc
Confidence 9985310 11 11111 13578999999876
Q ss_pred CCC---------CCHHHHHHHhhcC-CccEEEECcccCcceEEecCe-EEEccCCCcCCCCC------CCCCCCCcEEEE
Q 029615 92 IPW---------GDLDSLAMLQRQL-DVDILVTGHTHQFTAYKHEGG-VVINPGSATGAFSS------ITYDVNPSFVLM 154 (190)
Q Consensus 92 ~~~---------~~~~~l~~~~~~~-~~~~~i~GH~H~~~~~~~~~~-~~inpGs~~~~~~~------~~~~~~~~y~ll 154 (190)
... ...+.+.+++++. +++++++||+|.+.....+++ .++|||+.+..... .....+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~ 240 (274)
T 3d03_A 161 PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMH 240 (274)
T ss_dssp CCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEE
T ss_pred ccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCCCccccccccCCCceEEE
Confidence 421 1345666777776 899999999999988888884 77899998754211 113457899999
Q ss_pred EEeCCeEEEEEEEee
Q 029615 155 DIDGLRVVVYVYELI 169 (190)
Q Consensus 155 ~~~~~~~~~~~~~i~ 169 (190)
++++++++++++.+.
T Consensus 241 ~i~~~~~~~~~~~~~ 255 (274)
T 3d03_A 241 RQVGEQWVSYQHSLA 255 (274)
T ss_dssp EEETTEEEEEEEECS
T ss_pred EEeCCcEEEEEEecC
Confidence 999999999999984
No 13
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.91 E-value=1e-23 Score=166.91 Aligned_cols=150 Identities=13% Similarity=0.174 Sum_probs=104.7
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCCH--H-----------------------------HH--
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIK--E-----------------------------VH-- 47 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~--~-----------------------------~~-- 47 (190)
||||+++||+|++.. .+ +++.+.+++.++|.|+++||+++. . ..
T Consensus 5 ~mri~~iSDlH~~~~--~~-~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD--LL-PKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKF 81 (260)
T ss_dssp CCEEEEEECCTTCGG--GH-HHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChH--HH-HHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHH
Confidence 489999999998532 33 344444445689999999999982 1 12
Q ss_pred -HHHhhhCCcEEEecCCcccccCC------------CC-----ceE-EEE------------------------------
Q 029615 48 -DYLKIICPDLHIIRGEYDEETRY------------PE-----TKT-LTI------------------------------ 78 (190)
Q Consensus 48 -~~l~~l~~~~~~v~GNHD~~~~~------------p~-----~~~-~~~------------------------------ 78 (190)
+.|+++..|+++|+||||..... |. ... +++
T Consensus 82 l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
T 2yvt_A 82 FREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYV 161 (260)
T ss_dssp HHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHHH
T ss_pred HHHHHhcCCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcchhhH
Confidence 23333357899999999986310 00 011 111
Q ss_pred -----------CCEEEEEeecCccCC----------CCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCc
Q 029615 79 -----------GQFKLGLCHGHQVIP----------WGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSAT 137 (190)
Q Consensus 79 -----------~~~~i~~~Hg~~~~~----------~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~ 137 (190)
.+.+|+++|+++... ..+.+.+.+++++.++++++|||+| +...+.+++.++||||++
T Consensus 162 ~~~l~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~~in~Gs~~ 240 (260)
T 2yvt_A 162 EYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTIVVNPGEFE 240 (260)
T ss_dssp HHHGGGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEEEEECCBGG
T ss_pred HHHHHHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEEEEeCCCCC
Confidence 356799999987532 1134556667777799999999999 767777889999999987
Q ss_pred CCCCCCCCCCCCcEEEEEEeCCeEEEE
Q 029615 138 GAFSSITYDVNPSFVLMDIDGLRVVVY 164 (190)
Q Consensus 138 ~~~~~~~~~~~~~y~ll~~~~~~~~~~ 164 (190)
. ++|++++++++.+++.
T Consensus 241 ~----------g~~~ii~~~~~~~~~~ 257 (260)
T 2yvt_A 241 E----------GRYAFLDLTQHKIKLE 257 (260)
T ss_dssp G----------TEEEEEETTTTEEEEE
T ss_pred C----------CceEEEEEcCCEEEee
Confidence 3 3999999998865543
No 14
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.91 E-value=8.7e-24 Score=161.68 Aligned_cols=136 Identities=14% Similarity=0.121 Sum_probs=101.3
Q ss_pred eEEEEEecCCCCCCC----------CChHHHHHhhhcC--CCccEEEEcCCCCCH-----HHHHHHhhhCCcEEEecCCc
Q 029615 2 VLVLALGDLHIPHRA----------ADLPAKFKSMLVP--GKIQHIVCTGNLCIK-----EVHDYLKIICPDLHIIRGEY 64 (190)
Q Consensus 2 mri~~iSD~H~~~~~----------~~~~~~l~~~~~~--~~~D~vi~~GDl~~~-----~~~~~l~~l~~~~~~v~GNH 64 (190)
|||+++||+|++... ..+.+.+.+.+++ .++|.|+++||+++. ++.+.|+++..|+++|+|||
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GNh 81 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNH 81 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTT
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCCC
Confidence 789999999975431 1233444444443 589999999999873 67888888877899999999
Q ss_pred cccc--------CCCCceEEE-ECCEEEEEeecCccCCCCC-----HHHHHHHhhcCCccEEEECcccCcceEEec----
Q 029615 65 DEET--------RYPETKTLT-IGQFKLGLCHGHQVIPWGD-----LDSLAMLQRQLDVDILVTGHTHQFTAYKHE---- 126 (190)
Q Consensus 65 D~~~--------~~p~~~~~~-~~~~~i~~~Hg~~~~~~~~-----~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~---- 126 (190)
|... .+|....++ .++.+|+++||++...... .+.+.++++..+++++++||+|.+.....+
T Consensus 82 D~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~H~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~ 161 (195)
T 1xm7_A 82 DKDKESLKEYFDEIYDFYKIIEHKGKRILLSHYPAKDPITERYPDRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKD 161 (195)
T ss_dssp CCCHHHHTTTCSEEESSEEEEEETTEEEEEESSCSSCSSCCSCHHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTS
T ss_pred CCchhhhhhhhhchhHHHHHHhcCCcEEEEEccCCcCCCcccccchHHHHHHHHHHcCCcEEEECCcCCCCccccccccc
Confidence 9864 244545555 7899999999988654322 356666777778999999999999887664
Q ss_pred -CeEEEccCCCc
Q 029615 127 -GGVVINPGSAT 137 (190)
Q Consensus 127 -~~~~inpGs~~ 137 (190)
++.++|+|+-.
T Consensus 162 ~g~~~~nvg~~~ 173 (195)
T 1xm7_A 162 YRIECINANVEW 173 (195)
T ss_dssp SSCCEEECBGGG
T ss_pred CCcceEEEeEec
Confidence 67789998854
No 15
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.89 E-value=2e-22 Score=169.13 Aligned_cols=170 Identities=15% Similarity=0.095 Sum_probs=112.3
Q ss_pred CeEEEEEecCCCCCCCCCh----------HHHHHhhhcCCCccEEEEcCCCCCH---------HHHHHHhhh---CCcEE
Q 029615 1 MVLVLALGDLHIPHRAADL----------PAKFKSMLVPGKIQHIVCTGNLCIK---------EVHDYLKII---CPDLH 58 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~----------~~~l~~~~~~~~~D~vi~~GDl~~~---------~~~~~l~~l---~~~~~ 58 (190)
||||+++||+|++...... .+.+.+.+.+.+||+|+++||+++. .+.+.|+++ +.|++
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~pv~ 99 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVY 99 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 5999999999986431111 1233333457899999999999981 134556665 57999
Q ss_pred EecCCcccccCC----CCc-------------------eEEE---------------------------ECCEEEEEeec
Q 029615 59 IIRGEYDEETRY----PET-------------------KTLT---------------------------IGQFKLGLCHG 88 (190)
Q Consensus 59 ~v~GNHD~~~~~----p~~-------------------~~~~---------------------------~~~~~i~~~Hg 88 (190)
+|+||||..... |.. .-+. .++.+|+++|+
T Consensus 100 ~v~GNHD~~~~~~~~~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~~~~~~~~~~l~~l~~~~~~~~~~Ill~H~ 179 (386)
T 3av0_A 100 IVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQ 179 (386)
T ss_dssp ECCCGGGSCSSTTSCCGGGGGTTTCEECSEEEEEEETTEEEEEEEECCCCSTTHHHHHHHHHHHHHHHHTCSSEEEEECC
T ss_pred EEcCCCCCCccccccCHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCHHHHHHHHHHHHHhhhhcccCCCEEEEECc
Confidence 999999986422 100 0011 04578999998
Q ss_pred CccCCCCCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCC-----CCCcEEEEEEeC---Ce
Q 029615 89 HQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYD-----VNPSFVLMDIDG---LR 160 (190)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~-----~~~~y~ll~~~~---~~ 160 (190)
++.....+...+. ...-.++|++++||+|.+.....++..++||||+... .+++. ..++|+++++++ +.
T Consensus 180 ~~~~~~~~~~~~~-~~~l~~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~--~~~e~~~~~~~~kg~~lv~i~~~~~~~ 256 (386)
T 3av0_A 180 GINPYIPLDYELE-HFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEII--YRNEYEDYKKEGKGFYLVDFSGNDLDI 256 (386)
T ss_dssp CCTTTSSSSCSSC-GGGSCCCSEEEECSCCSCEEEECSSSEEEECCCSSCC--SGGGTHHHHHHCSEEEEEECCSSSCCG
T ss_pred CccccCCCCcccC-HHHhhhCCeEEccCCCCCccccCCCceEEECCccccc--CcchhccccCCCCEEEEEEEecCcCCC
Confidence 7642111000010 1111248999999999996555678899999999753 12221 468999999998 67
Q ss_pred EEEEEEEeeCCeE
Q 029615 161 VVVYVYELIDGEV 173 (190)
Q Consensus 161 ~~~~~~~i~~~~~ 173 (190)
++++++++...++
T Consensus 257 ~~v~~i~l~~r~~ 269 (386)
T 3av0_A 257 SDIEKIDIECREF 269 (386)
T ss_dssp GGEEEEECCCCCE
T ss_pred ceEEEEECCccee
Confidence 7899999966555
No 16
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.87 E-value=4.5e-21 Score=163.24 Aligned_cols=182 Identities=17% Similarity=0.155 Sum_probs=121.1
Q ss_pred CeEEEEEecCCCCCCCC------Ch---HHHHHhhhcCCCccEEEEcCCCCC-----H----HHHHHHhh----------
Q 029615 1 MVLVLALGDLHIPHRAA------DL---PAKFKSMLVPGKIQHIVCTGNLCI-----K----EVHDYLKI---------- 52 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~------~~---~~~l~~~~~~~~~D~vi~~GDl~~-----~----~~~~~l~~---------- 52 (190)
||||+++||+|++.... .. .+++.+.+.+.+||+|+++||+++ . .+++.|++
T Consensus 76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~~~ 155 (472)
T 4fbk_A 76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCEL 155 (472)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCCCC
T ss_pred CeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcchh
Confidence 69999999999864321 11 233444445789999999999998 1 23344433
Q ss_pred --------------------------hCCcEEEecCCcccccCC------------------------------CC----
Q 029615 53 --------------------------ICPDLHIIRGEYDEETRY------------------------------PE---- 72 (190)
Q Consensus 53 --------------------------l~~~~~~v~GNHD~~~~~------------------------------p~---- 72 (190)
.+.|++++.||||..... |.
T Consensus 156 e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~~~d~i~~~pv~l~k 235 (472)
T 4fbk_A 156 ELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQK 235 (472)
T ss_dssp EEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCSCSSSEEECCEEEEE
T ss_pred eecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcccCCceeEEEEEEEe
Confidence 146899999999997310 00
Q ss_pred ------------------------ce--EEEE-----CCEEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcc
Q 029615 73 ------------------------TK--TLTI-----GQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121 (190)
Q Consensus 73 ------------------------~~--~~~~-----~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~ 121 (190)
.. .+.. +.++|+++|+........ ..+..-+...++|++++||+|.+.
T Consensus 236 g~~~valyGl~y~~d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~-~yipe~ll~~g~DyValGH~H~~~ 314 (472)
T 4fbk_A 236 GFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT-SYLPESFIQDFYDFVLWGHEHECL 314 (472)
T ss_dssp TTEEEEEEECCCCCHHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTT-SSCCGGGSCTTCSEEEEESCCSCE
T ss_pred CCceEEEEecCCCchhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCcc-ccCChhhhhcCCCEEEecCcccce
Confidence 00 0111 236899999865422110 001111234589999999999998
Q ss_pred eEE----ecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeEEEEEEEeeC-CeEEEEEEEEeeC
Q 029615 122 AYK----HEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELID-GEVKVDKIDFKKT 183 (190)
Q Consensus 122 ~~~----~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 183 (190)
... .++..++||||+.....+..+..+++|++++++++.++++++++.. .++...++++...
T Consensus 315 ~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~L~~~ 381 (472)
T 4fbk_A 315 IDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSEV 381 (472)
T ss_dssp EEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred eeecccCCCCeEEEECCCccccccCccCCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEEecc
Confidence 764 2578999999987542222233688999999999999999999976 6677777766443
No 17
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.87 E-value=2.1e-21 Score=164.42 Aligned_cols=182 Identities=18% Similarity=0.195 Sum_probs=119.6
Q ss_pred CeEEEEEecCCCCCCCCC---------hHHHHHhhhcCCCccEEEEcCCCCC---------HHHHHHHhhh---------
Q 029615 1 MVLVLALGDLHIPHRAAD---------LPAKFKSMLVPGKIQHIVCTGNLCI---------KEVHDYLKII--------- 53 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~---------~~~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~l--------- 53 (190)
||||+++||+|++..... ..+++.+.+++.+||+|+++||+++ ..+.+.|+++
T Consensus 32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~~ 111 (431)
T 3t1i_A 32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQF 111 (431)
T ss_dssp EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCCC
T ss_pred CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCcccc
Confidence 599999999998654321 1233444456789999999999998 1233444432
Q ss_pred ---------------------------CCcEEEecCCcccccC------------------C---C--Cc-----eEEE-
Q 029615 54 ---------------------------CPDLHIIRGEYDEETR------------------Y---P--ET-----KTLT- 77 (190)
Q Consensus 54 ---------------------------~~~~~~v~GNHD~~~~------------------~---p--~~-----~~~~- 77 (190)
+.|+++|.||||...+ + . +. ..+.
T Consensus 112 ~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~~~e~i~~~Pv~l~~ 191 (431)
T 3t1i_A 112 EILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQK 191 (431)
T ss_dssp EECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCCCSSCEEECCEEEEE
T ss_pred eeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcCcccceeeEEEEEec
Confidence 4689999999998731 0 0 00 0000
Q ss_pred ------------------------------------ECCEEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcc
Q 029615 78 ------------------------------------IGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121 (190)
Q Consensus 78 ------------------------------------~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~ 121 (190)
-+.++|+++|+..... .....+..-+...++|++++||+|.+.
T Consensus 192 g~~~valyGl~~~~~~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~-g~~~~ip~~l~~~~~Dyv~lGH~H~~~ 270 (431)
T 3t1i_A 192 GSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKH-GSTNFIPEQFLDDFIDLVIWGHEHECK 270 (431)
T ss_dssp TTEEEEEEEECCCCHHHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCS-SSSSSCCGGGSCTTCCEEEECSCCSCE
T ss_pred CCEeEEEEeCCCCCHHHHhhhhccccceeecccccCCCceEEEEECCCccCC-CccccCCHhHhhCCCCEEEeccccccc
Confidence 0125788888754211 000111112234579999999999998
Q ss_pred eEE----ecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeEEEEEEEee-CCeEEEEEEEEeeC
Q 029615 122 AYK----HEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELI-DGEVKVDKIDFKKT 183 (190)
Q Consensus 122 ~~~----~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 183 (190)
... .++..++||||+........+..+.+|++++++++.++++++++. -.++...++++...
T Consensus 271 ~~~~~~~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v~l~~~ 337 (431)
T 3t1i_A 271 IAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLANH 337 (431)
T ss_dssp EEEEECTTTCCEEEECCCSSCCSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred ccccccCCCCEEEEeCCCCcccCcCcccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEEEEecc
Confidence 754 246799999998863111112356799999999999999999998 57788888876543
No 18
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.86 E-value=6.7e-21 Score=160.72 Aligned_cols=182 Identities=17% Similarity=0.161 Sum_probs=119.3
Q ss_pred CeEEEEEecCCCCCCCC------ChH---HHHHhhhcCCCccEEEEcCCCCC-----H----HHHHHHhh----------
Q 029615 1 MVLVLALGDLHIPHRAA------DLP---AKFKSMLVPGKIQHIVCTGNLCI-----K----EVHDYLKI---------- 52 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~------~~~---~~l~~~~~~~~~D~vi~~GDl~~-----~----~~~~~l~~---------- 52 (190)
||||+++||+|++.... ... +++.+.+++.+||+|+++||+++ . .+.+.|++
T Consensus 13 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~~~ 92 (417)
T 4fbw_A 13 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCEL 92 (417)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCCCC
T ss_pred CeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcccc
Confidence 69999999999864321 112 23444445789999999999998 1 22334433
Q ss_pred --------------------------hCCcEEEecCCcccccCC------------------------------C-----
Q 029615 53 --------------------------ICPDLHIIRGEYDEETRY------------------------------P----- 71 (190)
Q Consensus 53 --------------------------l~~~~~~v~GNHD~~~~~------------------------------p----- 71 (190)
.+.|++++.||||...+. |
T Consensus 93 e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~~~i~~~pv~l~~ 172 (417)
T 4fbw_A 93 ELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQK 172 (417)
T ss_dssp EECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC---CEEECCEEEEE
T ss_pred eeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccCCceeEEeEEEEe
Confidence 146899999999986310 1
Q ss_pred -------------C----------ce--EEEE-----CCEEEEEeecCccCCCCCHHHHHHHhhcCCccEEEECcccCcc
Q 029615 72 -------------E----------TK--TLTI-----GQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFT 121 (190)
Q Consensus 72 -------------~----------~~--~~~~-----~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~~~~i~GH~H~~~ 121 (190)
. .. .+.. +.++|+++|+........ ..+..-+...++|++++||+|.+.
T Consensus 173 g~~~valyG~~~~~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~-~yip~~l~~~~~DyvalGH~H~~~ 251 (417)
T 4fbw_A 173 GFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT-SYLPESFIQDFYDFVLWGHEHECL 251 (417)
T ss_dssp TTEEEEEEEECCCCHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSS-SSCCGGGSCTTCSEEEEESCCSCE
T ss_pred cCceEEEEeccCCchhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCc-ccCchhHhhcCCCEEEecCccccc
Confidence 0 00 0111 347899999754321100 000012334589999999999998
Q ss_pred eEE----ecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeEEEEEEEeeC-CeEEEEEEEEeeC
Q 029615 122 AYK----HEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELID-GEVKVDKIDFKKT 183 (190)
Q Consensus 122 ~~~----~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 183 (190)
... .++..++||||+.....+..+..+++|++++++++.++++++++.. .++....+++...
T Consensus 252 ~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 252 IDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred eeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEeecc
Confidence 764 3578999999987542111123688999999999999999999976 5677777776554
No 19
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.85 E-value=2.6e-21 Score=150.59 Aligned_cols=133 Identities=20% Similarity=0.286 Sum_probs=92.9
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcC-CCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEecCCccccc------
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVP-GKIQHIVCTGNLCI-----KEVHDYLKIICPDLHIIRGEYDEET------ 68 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~------ 68 (190)
||||+++||+|++. ..+.+ +.+.+.. .++|.|+++||+++ .++++.|.+ .++++|+||||...
T Consensus 12 ~~~i~visDiHg~~--~~l~~-~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~~~~~~~~ 86 (221)
T 1g5b_A 12 YRNIWVVGDLHGCY--TNLMN-KLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQMMIDGLSE 86 (221)
T ss_dssp CSCEEEECCCTTCH--HHHHH-HHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHHHHHHHST
T ss_pred CceEEEEEcCCCCH--HHHHH-HHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHHHHhhhcc
Confidence 58999999999742 12323 3333333 47999999999998 345555543 47999999999652
Q ss_pred ----------------------------------CCCCceEEEECCEEEEEeecCccCC---CC---CH-------HHHH
Q 029615 69 ----------------------------------RYPETKTLTIGQFKLGLCHGHQVIP---WG---DL-------DSLA 101 (190)
Q Consensus 69 ----------------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~---~~---~~-------~~l~ 101 (190)
.+|....++.++.+++++||..... +. .. ..+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~lw~~~~~~ 166 (221)
T 1g5b_A 87 RGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNRERIS 166 (221)
T ss_dssp TCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHHHCCHHHH
T ss_pred CCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccccCchhhh
Confidence 1355556677899999999974211 11 11 2222
Q ss_pred HHhh-----cCCccEEEECcccCcceEEecCeEEEccCCCcC
Q 029615 102 MLQR-----QLDVDILVTGHTHQFTAYKHEGGVVINPGSATG 138 (190)
Q Consensus 102 ~~~~-----~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~ 138 (190)
..++ ..+++++++||||.+.....+++.+|||||+..
T Consensus 167 ~~~~~~~~~~~~~~~vv~GHth~~~~~~~~~~~~in~Gs~~g 208 (221)
T 1g5b_A 167 NSQNGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAVFC 208 (221)
T ss_dssp HHHTTCCCCCBTSSEEEECSSCCSSCEEETTEEECCCCHHHH
T ss_pred hhccccCCcccCCCEEEECCCCCccceeeCCEEEEECCCCcC
Confidence 2233 357889999999999988889999999999863
No 20
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.85 E-value=9.6e-21 Score=155.96 Aligned_cols=175 Identities=18% Similarity=0.109 Sum_probs=109.3
Q ss_pred CeEEEEEecCCCC----CCCCC---------hHHHHHhhhcCCCccEEEEcCC-CCC-----HH----HHHHHhhhC--C
Q 029615 1 MVLVLALGDLHIP----HRAAD---------LPAKFKSMLVPGKIQHIVCTGN-LCI-----KE----VHDYLKIIC--P 55 (190)
Q Consensus 1 mmri~~iSD~H~~----~~~~~---------~~~~l~~~~~~~~~D~vi~~GD-l~~-----~~----~~~~l~~l~--~ 55 (190)
+|||+++||+|++ ..... ..+++.+.++++++|+|+++|| ++| .+ +.+.|+++. .
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~ 97 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTA 97 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 4999999999975 21111 1233444445679999999999 998 12 345666664 6
Q ss_pred cEEEecCCccccc-----------C--C---C-----------Cce--EE------------------------------
Q 029615 56 DLHIIRGEYDEET-----------R--Y---P-----------ETK--TL------------------------------ 76 (190)
Q Consensus 56 ~~~~v~GNHD~~~-----------~--~---p-----------~~~--~~------------------------------ 76 (190)
|+++|+||||... + + . ... +.
T Consensus 98 pv~~i~GNHD~~~~~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~ 177 (336)
T 2q8u_A 98 PVVVLPGNHDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLY 177 (336)
T ss_dssp CEEECCC------CHHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCccccccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8999999999753 1 0 0 000 00
Q ss_pred ----EECCEEEEEeecCccCCCCC-HHH------HHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCC
Q 029615 77 ----TIGQFKLGLCHGHQVIPWGD-LDS------LAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITY 145 (190)
Q Consensus 77 ----~~~~~~i~~~Hg~~~~~~~~-~~~------l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~ 145 (190)
..+..+|+++|++....... .+. +...+...++|++++||+|.+..... +..++||||+... .+++
T Consensus 178 ~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~-~~~i~y~GS~~~~--s~~e 254 (336)
T 2q8u_A 178 EEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQK-QPLTIYPGSLIRI--DFGE 254 (336)
T ss_dssp HHHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEEE-TTEEEECCCSSCC--SGGG
T ss_pred HhccCCCCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeCC-CccEEECCCCcCC--Cccc
Confidence 12457899999877543211 111 11112345899999999999987653 4678999998643 2222
Q ss_pred -CCCCcEEEEEEeCC-eEEEEEEEeeCCeEEEEEE
Q 029615 146 -DVNPSFVLMDIDGL-RVVVYVYELIDGEVKVDKI 178 (190)
Q Consensus 146 -~~~~~y~ll~~~~~-~~~~~~~~i~~~~~~~~~~ 178 (190)
..+++|++++++++ .++++++++...++...++
T Consensus 255 ~~~~~~~~lv~i~~~~~~~v~~i~~~~r~~~~~~~ 289 (336)
T 2q8u_A 255 EADEKGAVFVELKRGEPPRYERIDASPLPLKTLYY 289 (336)
T ss_dssp TTCCCEEEEEEEETTSCCEEEEEECCCCCEEEEEE
T ss_pred cCCCCEEEEEEEeCCCccEEEEEECCCEEEEEeec
Confidence 34789999999976 4899999997766555444
No 21
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.83 E-value=3.3e-19 Score=144.04 Aligned_cols=84 Identities=14% Similarity=0.040 Sum_probs=59.7
Q ss_pred EEEEEeecCccCCCC-------CHHHHHHHhhcC-CccEEEECcccCcceEE-ecCeEEEccCCCcCCCCCCCCCCCCcE
Q 029615 81 FKLGLCHGHQVIPWG-------DLDSLAMLQRQL-DVDILVTGHTHQFTAYK-HEGGVVINPGSATGAFSSITYDVNPSF 151 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~~-------~~~~l~~~~~~~-~~~~~i~GH~H~~~~~~-~~~~~~inpGs~~~~~~~~~~~~~~~y 151 (190)
..|+++|.++..... ..+.+..+++++ +++++++||+|.+.... .+++.++++|++... ....++|
T Consensus 222 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~-----~~~~~~y 296 (322)
T 2nxf_A 222 RVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET-----PPHSHAF 296 (322)
T ss_dssp EEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGC-----CTTSCEE
T ss_pred cEEEEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecchhhC-----CCCCCcE
Confidence 345666655542111 345566666666 68899999999998877 788999988887531 2356899
Q ss_pred EEEEEeCCeEEEEEEEee
Q 029615 152 VLMDIDGLRVVVYVYELI 169 (190)
Q Consensus 152 ~ll~~~~~~~~~~~~~i~ 169 (190)
+++++++++++++.+...
T Consensus 297 ~~v~~~~~~~~~~~~~~~ 314 (322)
T 2nxf_A 297 ATAYLYEDRMVMKGRGRV 314 (322)
T ss_dssp EEEEECSSEEEEEEEETS
T ss_pred EEEEEECCeEEEEecccc
Confidence 999999999888766553
No 22
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.82 E-value=3.5e-19 Score=151.39 Aligned_cols=81 Identities=9% Similarity=-0.057 Sum_probs=61.5
Q ss_pred EEEEEeecCccCCC---------CCHHHHHHHhhcCCccEEEECcccCcceEEec-----CeEEEccCCCcCCCCCCCCC
Q 029615 81 FKLGLCHGHQVIPW---------GDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE-----GGVVINPGSATGAFSSITYD 146 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~---------~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~-----~~~~inpGs~~~~~~~~~~~ 146 (190)
..|+++|+++.... ...+.+.+++++.+++++++||+|.+.....+ +...+++||++..
T Consensus 237 ~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~~------- 309 (443)
T 2xmo_A 237 KLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVF------- 309 (443)
T ss_dssp EEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTST-------
T ss_pred eEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCccccC-------
Confidence 56899998875321 13566777778889999999999998876542 3678899998742
Q ss_pred CCCcEEEEEEeCCe--EEEEEEEee
Q 029615 147 VNPSFVLMDIDGLR--VVVYVYELI 169 (190)
Q Consensus 147 ~~~~y~ll~~~~~~--~~~~~~~i~ 169 (190)
+++|+++++++++ ++.+.+.++
T Consensus 310 -p~~y~il~i~~~~~~~~~~~~~l~ 333 (443)
T 2xmo_A 310 -PHKYGNITYSAKNKNFTYQSQKLD 333 (443)
T ss_dssp -TCEEEEEEEETTTTEEEEEEEECC
T ss_pred -CCCeEEEEEeCCCceEEEEEEEEe
Confidence 5899999999876 677776663
No 23
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.82 E-value=6.9e-19 Score=142.36 Aligned_cols=129 Identities=16% Similarity=0.116 Sum_probs=92.9
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-------HHHHHHHhhhC-CcEEEecCCcccccC----
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-------KEVHDYLKIIC-PDLHIIRGEYDEETR---- 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-------~~~~~~l~~l~-~~~~~v~GNHD~~~~---- 69 (190)
|||+++||+|+... .+ +-.++|.|+++||+++ .+.+++|+++. .++++|+||||....
T Consensus 60 mri~~iSD~H~~~~--~l--------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~~d~~~~ 129 (296)
T 3rl5_A 60 TRFVCISDTRSRTD--GI--------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFM 129 (296)
T ss_dssp EEEEEEBCCTTCCT--TC--------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGGGCHHHH
T ss_pred eEEEEEeeCCCCcc--hh--------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccccchhhh
Confidence 89999999998542 11 2258999999999998 23566777775 568999999999521
Q ss_pred ---------------------------CCC------ceEEEE-----------------------------------CCE
Q 029615 70 ---------------------------YPE------TKTLTI-----------------------------------GQF 81 (190)
Q Consensus 70 ---------------------------~p~------~~~~~~-----------------------------------~~~ 81 (190)
+.. ....++ .+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~~~ 209 (296)
T 3rl5_A 130 ADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGT 209 (296)
T ss_dssp HHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCTTC
T ss_pred hhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCCCC
Confidence 000 011111 234
Q ss_pred EEEEeecCccCCC---------CCHHHHHHHh-hcCCccEEEECcccCcce-EEecCeEEEccCCCcCCC
Q 029615 82 KLGLCHGHQVIPW---------GDLDSLAMLQ-RQLDVDILVTGHTHQFTA-YKHEGGVVINPGSATGAF 140 (190)
Q Consensus 82 ~i~~~Hg~~~~~~---------~~~~~l~~~~-~~~~~~~~i~GH~H~~~~-~~~~~~~~inpGs~~~~~ 140 (190)
.|+++|++++... .+.+.+.+.+ ++.++++++|||+|.+.. .+.+++.++||||++.++
T Consensus 210 dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~ 279 (296)
T 3rl5_A 210 DILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSF 279 (296)
T ss_dssp SEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTS
T ss_pred eEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCc
Confidence 6899999887541 2345666666 578999999999999865 456889999999999754
No 24
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.81 E-value=6.5e-19 Score=147.53 Aligned_cols=172 Identities=15% Similarity=0.105 Sum_probs=107.5
Q ss_pred eEEEEEecCCCCCC----CCC---------hHHHHHhhhcCCCccEEEEcCCCC-C-----H-------HHHHHHhhhCC
Q 029615 2 VLVLALGDLHIPHR----AAD---------LPAKFKSMLVPGKIQHIVCTGNLC-I-----K-------EVHDYLKIICP 55 (190)
Q Consensus 2 mri~~iSD~H~~~~----~~~---------~~~~l~~~~~~~~~D~vi~~GDl~-~-----~-------~~~~~l~~l~~ 55 (190)
|||+++||+|++.. ... ..+.+.+.+++.++|+|+++||++ + . +.+..|.+. .
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 89999999998654 211 123344444568999999999999 6 1 122334444 7
Q ss_pred cEEEecCCccccc---------CCCC---------ceEE-----------------------------------------
Q 029615 56 DLHIIRGEYDEET---------RYPE---------TKTL----------------------------------------- 76 (190)
Q Consensus 56 ~~~~v~GNHD~~~---------~~p~---------~~~~----------------------------------------- 76 (190)
|+++|+||||... .++. ...+
T Consensus 80 ~v~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~~l~~~~ 159 (379)
T 3tho_B 80 PVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLY 159 (379)
T ss_dssp CEEECCCTTSCTTHHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCccccCccccccccccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHHHHHHHH
Confidence 8999999999642 0000 0000
Q ss_pred ----EECCEEEEEeecCccCCCC--CHHH-----HHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCC
Q 029615 77 ----TIGQFKLGLCHGHQVIPWG--DLDS-----LAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITY 145 (190)
Q Consensus 77 ----~~~~~~i~~~Hg~~~~~~~--~~~~-----l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~ 145 (190)
..+..+|+++|++..+... +.+. +...+...++||+++||+|.+.... ++..++||||+... .+++
T Consensus 160 ~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~-~~~~i~y~GS~~~~--~f~E 236 (379)
T 3tho_B 160 EEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQ-KQPLTIYPGSLIRI--DFGE 236 (379)
T ss_dssp HHHHTCSSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEEE-ETTEEEECCCSSCC--SGGG
T ss_pred HHhcCCCCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEeC-CCCcEEecCCCCCC--Cccc
Confidence 0245789999987653221 1111 1111223589999999999996443 33578999998642 2233
Q ss_pred -CCCCcEEEEEEeCCe-EEEEEEEeeCCeEEEEE
Q 029615 146 -DVNPSFVLMDIDGLR-VVVYVYELIDGEVKVDK 177 (190)
Q Consensus 146 -~~~~~y~ll~~~~~~-~~~~~~~i~~~~~~~~~ 177 (190)
..+++|+++++++++ .++++++....++....
T Consensus 237 ~~~~k~~~lv~~~~~~~~~v~~i~~~~r~~~~~~ 270 (379)
T 3tho_B 237 EADEKGAVFVELKRGEPPRYERIDASPLPLKTLY 270 (379)
T ss_dssp SSSCCEEEEEECCSSSCCEEEEEECCCCCEEEEE
T ss_pred ccCCCEEEEEEEcCCCcceEEEeCCCCeeeEEEE
Confidence 346899999998764 68888884344444443
No 25
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.81 E-value=4.1e-19 Score=143.14 Aligned_cols=180 Identities=14% Similarity=0.134 Sum_probs=119.0
Q ss_pred eEEEEEecCCCCCCCC-------ChHHHHHhhhcCCCccEEEEcCCCCC---------HHHHHHHhh------h-CCcEE
Q 029615 2 VLVLALGDLHIPHRAA-------DLPAKFKSMLVPGKIQHIVCTGNLCI---------KEVHDYLKI------I-CPDLH 58 (190)
Q Consensus 2 mri~~iSD~H~~~~~~-------~~~~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~------l-~~~~~ 58 (190)
|||+++||+|...... .+.+.+.+++++.++|+|+++||++. .+..+.+++ + ..|++
T Consensus 7 ~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 86 (313)
T 1ute_A 7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH 86 (313)
T ss_dssp EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred eEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEE
Confidence 8999999999854211 12234445455679999999999842 233444443 4 57999
Q ss_pred EecCCcccccC---------------CCC--------------ce-EEE-------------------------------
Q 029615 59 IIRGEYDEETR---------------YPE--------------TK-TLT------------------------------- 77 (190)
Q Consensus 59 ~v~GNHD~~~~---------------~p~--------------~~-~~~------------------------------- 77 (190)
+++||||.... +|. .. ++.
T Consensus 87 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 166 (313)
T 1ute_A 87 VLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 166 (313)
T ss_dssp ECCCHHHHHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHH
T ss_pred EECCCCccCCCccccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccchHHHHH
Confidence 99999997421 111 00 000
Q ss_pred ----------ECCEEEEEeecCccCCCC---C---HHHHHHHhhcCCccEEEECcccCcceEE-ecCeEEEccCCCcCCC
Q 029615 78 ----------IGQFKLGLCHGHQVIPWG---D---LDSLAMLQRQLDVDILVTGHTHQFTAYK-HEGGVVINPGSATGAF 140 (190)
Q Consensus 78 ----------~~~~~i~~~Hg~~~~~~~---~---~~~l~~~~~~~~~~~~i~GH~H~~~~~~-~~~~~~inpGs~~~~~ 140 (190)
...++|+++|++++.... . .+.+..++++++++++++||+|...... .+++.++++|+.+...
T Consensus 167 ~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~ 246 (313)
T 1ute_A 167 AWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMD 246 (313)
T ss_dssp HHHHHHHHHCCCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCC
T ss_pred HHHHHHHHhCCCCeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcC
Confidence 024688999988764321 1 2344556777899999999999876655 5789999999988531
Q ss_pred CCCC-----------------CCCCCcEEEEEEeCCeEEEEEEEeeCCeEEEEEEEEeeCC
Q 029615 141 SSIT-----------------YDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTS 184 (190)
Q Consensus 141 ~~~~-----------------~~~~~~y~ll~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 184 (190)
+.. ....++|++++++++.++++++.+.+.. +.++.++|++
T Consensus 247 -~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~~~~~~~~~~~~~g~~--~~~~~l~~~~ 304 (313)
T 1ute_A 247 -PSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKS--LFKTKLPRRA 304 (313)
T ss_dssp -CCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETTSCE--EEEEEECCCC
T ss_pred -ccccccccCCCcccceeccCcCCCCceEEEEEEcCEEEEEEEcCCCcE--EEEEEecccc
Confidence 110 1123799999999999999999985543 4455666653
No 26
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.79 E-value=7.3e-19 Score=144.66 Aligned_cols=170 Identities=18% Similarity=0.118 Sum_probs=106.3
Q ss_pred eEEEEEecCCCCCCCCC----------hHHHHHhhhcCCCccEEEEcCCCCC-----H----HHHHHHhhh---CCcEEE
Q 029615 2 VLVLALGDLHIPHRAAD----------LPAKFKSMLVPGKIQHIVCTGNLCI-----K----EVHDYLKII---CPDLHI 59 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~----------~~~~l~~~~~~~~~D~vi~~GDl~~-----~----~~~~~l~~l---~~~~~~ 59 (190)
|||+++||+|++..... ..+.+.+.++++++|+|+++||+++ . ...+.|+++ +.|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 89999999998643111 1122333345689999999999998 1 122344443 468999
Q ss_pred ecCCcccccCCC---------Cc-eE------------------------------------------------------
Q 029615 60 IRGEYDEETRYP---------ET-KT------------------------------------------------------ 75 (190)
Q Consensus 60 v~GNHD~~~~~p---------~~-~~------------------------------------------------------ 75 (190)
|+||||...... .. .+
T Consensus 81 v~GNHD~~~~~~~~~~~l~~~g~v~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~~~~~~~~l~~ 160 (333)
T 1ii7_A 81 IEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKR 160 (333)
T ss_dssp ECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCCCSSSEEEEECTTSCEEEEEEETTEEEEEECCCCHHHHHSSTTHHHH
T ss_pred eCCcCCCccCCcCHHHHHHHcCCcEEecccccccccceeeecccCCCceeeccCcCCEEEEecCCcCHHHHHHHHHHHHH
Confidence 999999863100 00 00
Q ss_pred -EEECCEEEEEeecCccCC-----C-CCHHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCC---
Q 029615 76 -LTIGQFKLGLCHGHQVIP-----W-GDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITY--- 145 (190)
Q Consensus 76 -~~~~~~~i~~~Hg~~~~~-----~-~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~--- 145 (190)
+..++.+|+++|++.... . ...-.+..+. .++|++++||+|.+.....++..+++|||+... ..++
T Consensus 161 ~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~~~l~--~~~dyvalGH~H~~q~~~~~~~~i~ypGS~~~~--~~~E~~~ 236 (333)
T 1ii7_A 161 LFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLP--EGYLYYALGHIHKRYETSYSGSPVVYPGSLERW--DFGDYEV 236 (333)
T ss_dssp HCCCCSSEEEEEECCBHHHHHTTTCCCCSBCGGGSC--TTCSEEEEESCSSCEEEEETTEEEEECCCSSCC--SGGGCSE
T ss_pred hhCCCCCeEEEEcCChhhcccccccccceecHHHCC--ccCCEEEccccccceecCCCCceEEEcCCCeec--ccchhcc
Confidence 001123788888764211 0 0000011121 368999999999999776678899999998752 1111
Q ss_pred -------------CCCCcEEEEEEeCCeEEEEEEEeeCCeEEEEEEE
Q 029615 146 -------------DVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKID 179 (190)
Q Consensus 146 -------------~~~~~y~ll~~~~~~~~~~~~~i~~~~~~~~~~~ 179 (190)
..+.+|.+++ ..+++++++...++...+++
T Consensus 237 ~~~~~G~~~~p~~~~~kg~~lv~----~~~~~~i~l~~r~~~~~~i~ 279 (333)
T 1ii7_A 237 RYEWDGIKFKERYGVNKGFYIVE----DFKPRFVEIKVRPFIDVKIK 279 (333)
T ss_dssp EEEECSSSEEEEECCCCEEEEEE----TTEEEEEECCCCCEEEEEEE
T ss_pred ccccccccccccccCCCeEEEEe----cCceeEEECCCCceEEEEec
Confidence 2378999999 35788888877776544443
No 27
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.66 E-value=2.5e-15 Score=124.16 Aligned_cols=103 Identities=15% Similarity=0.175 Sum_probs=73.7
Q ss_pred EEEEEeecCccCCC--CC----HHHHHHHhhcCCccEEEECcccCcceEEecCeEEEccCCCcCCCCC-CC-------CC
Q 029615 81 FKLGLCHGHQVIPW--GD----LDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSS-IT-------YD 146 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~--~~----~~~l~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~-~~-------~~ 146 (190)
+.|++.|.+++... .+ .+.+..++++++++++++||.|.......+++.++..|+.+..+.. .. ..
T Consensus 192 ~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~ 271 (342)
T 3tgh_A 192 FIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFS 271 (342)
T ss_dssp EEEEECSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEETTEEEEEECCSSCCCCCCSSCCTTEEEEE
T ss_pred cEEEEECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEeeCCcEEEEeCccccccccCCCCCCcceeec
Confidence 56777776665322 11 2345567788899999999999998888889999999988754311 00 12
Q ss_pred CCCcEEEEEEeCCeEEEEEEEeeCCeEEEEEEEEeeCC
Q 029615 147 VNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTS 184 (190)
Q Consensus 147 ~~~~y~ll~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 184 (190)
...+|+++++++++++++++...++++ ..++++.|+.
T Consensus 272 ~~~Gf~~l~v~~~~l~~~~~~~~~G~v-ld~~~i~k~~ 308 (342)
T 3tgh_A 272 SDIGFCVHELSNNGIVTKFVSSKKGEV-IYTHKLNIKK 308 (342)
T ss_dssp CSSEEEEEEEETTEEEEEEEETTTTEE-EEEEEEECCC
T ss_pred CCCcEEEEEEECCEEEEEEEECCCCcE-EEEEEEECCC
Confidence 568999999999999999998545553 5566666654
No 28
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.64 E-value=4.4e-16 Score=124.24 Aligned_cols=144 Identities=16% Similarity=0.156 Sum_probs=95.0
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCC-ccEEEEcCCCCC-----HHHHHHHhhhCCcEEEecCCccccc-----CC
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGK-IQHIVCTGNLCI-----KEVHDYLKIICPDLHIIRGEYDEET-----RY 70 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~-~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~-----~~ 70 (190)
+||+++||+|+.. ..+ +++.+.+...+ +|.++++||+++ .++++.|.++ ++++|+||||... ..
T Consensus 19 ~~i~visDiHg~~--~~l-~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~--~~~~v~GNHd~~~~~~~~~~ 93 (262)
T 2qjc_A 19 GRVIIVGDIHGCR--AQL-EDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL--GAYSVLGNHDAKLLKLVKKL 93 (262)
T ss_dssp SCEEEECCCTTCH--HHH-HHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH--TCEECCCHHHHHHHHHHHCC
T ss_pred CeEEEEeCCCCCH--HHH-HHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC--CCEEEeCcChHHHHhhhcCC
Confidence 4999999999742 122 33334344444 499999999998 4667777765 5899999999753 10
Q ss_pred ----------------------CC---------ceEEEECCEEEEEeecCccCCC----CCHHHHHHH------------
Q 029615 71 ----------------------PE---------TKTLTIGQFKLGLCHGHQVIPW----GDLDSLAML------------ 103 (190)
Q Consensus 71 ----------------------p~---------~~~~~~~~~~i~~~Hg~~~~~~----~~~~~l~~~------------ 103 (190)
+. .....+++.+++++||.....+ ...+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~~~~~l~~ir~~~~~~~~~~~ 173 (262)
T 2qjc_A 94 GKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQYEDEVTTMRNLIEKEQEATG 173 (262)
T ss_dssp -------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGCCHHHHHHCCEEEEC------
T ss_pred CccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccCCHHHHhhhhhcccccccCCC
Confidence 10 1234556678999999643111 112222110
Q ss_pred -----------------hhc-CCccEEEECcccCcceEEec--CeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCe
Q 029615 104 -----------------QRQ-LDVDILVTGHTHQFTAYKHE--GGVVINPGSATGAFSSITYDVNPSFVLMDIDGLR 160 (190)
Q Consensus 104 -----------------~~~-~~~~~~i~GH~H~~~~~~~~--~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~ 160 (190)
++. .+.+++++||+|.......+ ++..||||++.. ..+.++.+++++
T Consensus 174 G~~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~~~g----------G~Lt~l~l~~~~ 240 (262)
T 2qjc_A 174 GVTLTATEETNDGGKPWASMWRGPETVVFGHDARRGLQEQYKPLAIGLDSRCVYG----------GRLSAAVFPGGC 240 (262)
T ss_dssp -CCEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGCCBCTTTTTEEECCCBGGGT----------SEEEEEEETTTE
T ss_pred CccccccCCCCcCCCChhhccCCCCEEEECCCccccccccCCCCEEEeeCccccC----------CeeEEEEEcCCc
Confidence 011 24789999999998877777 899999999752 477788887763
No 29
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.52 E-value=1e-12 Score=111.22 Aligned_cols=180 Identities=15% Similarity=0.150 Sum_probs=113.7
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcC-CCccEEEEcCCCCCH--------H----HHHHHhhh--CCcEEEecCCccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVP-GKIQHIVCTGNLCIK--------E----VHDYLKII--CPDLHIIRGEYDE 66 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~~--------~----~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
+||+++||+|... ...+.+..+.+. .++|+|+++||++.. . ..+.++.+ ..|+++++||||.
T Consensus 127 ~~f~~~gD~~~~~---~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 127 YVFGLIGDIGQTH---DSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEI 203 (426)
T ss_dssp EEEEEECSCTTBH---HHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGC
T ss_pred eEEEEEEeCCCCC---chHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEecccccc
Confidence 7999999999732 112334444433 489999999999951 1 12233333 4689999999997
Q ss_pred cc-----------------CCCC---------ceEEEE-----------------------------------CCEEEEE
Q 029615 67 ET-----------------RYPE---------TKTLTI-----------------------------------GQFKLGL 85 (190)
Q Consensus 67 ~~-----------------~~p~---------~~~~~~-----------------------------------~~~~i~~ 85 (190)
.. .+|. ...++. ..++|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 283 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVL 283 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEE
T ss_pred ccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEE
Confidence 42 1221 111111 1257888
Q ss_pred eecCccCCC----CC----HHHHHHHhhcCCccEEEECcccCcceEE-------------------ecCeEEEccCCCcC
Q 029615 86 CHGHQVIPW----GD----LDSLAMLQRQLDVDILVTGHTHQFTAYK-------------------HEGGVVINPGSATG 138 (190)
Q Consensus 86 ~Hg~~~~~~----~~----~~~l~~~~~~~~~~~~i~GH~H~~~~~~-------------------~~~~~~inpGs~~~ 138 (190)
.|.+++... .+ .+.+..++++++++++++||+|...... .+++.+|..|+.|.
T Consensus 284 ~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 284 VHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCC
T ss_pred eccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCcc
Confidence 887665321 11 2345567778899999999999865431 24678888887664
Q ss_pred CCC-------CCC-----CCCCCcEEEEEEeCC-eEEEEEEEeeCCe-EEEEEEEEeeCC
Q 029615 139 AFS-------SIT-----YDVNPSFVLMDIDGL-RVVVYVYELIDGE-VKVDKIDFKKTS 184 (190)
Q Consensus 139 ~~~-------~~~-----~~~~~~y~ll~~~~~-~~~~~~~~i~~~~-~~~~~~~~~~~~ 184 (190)
... +.. .....+|+.+++.++ .+.++++.-.+++ ....++++.|..
T Consensus 364 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 364 SEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred ccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 211 000 123578999999655 6889998765555 356788887753
No 30
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.42 E-value=1.3e-11 Score=104.25 Aligned_cols=179 Identities=16% Similarity=0.155 Sum_probs=109.8
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcC-CCccEEEEcCCCCCHH------------HHHHHhhh--CCcEEEecCCccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVP-GKIQHIVCTGNLCIKE------------VHDYLKII--CPDLHIIRGEYDE 66 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~~~------------~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
|||+++||+|... ...+.+..+.+. .++|+|+++||++... ..+.++.+ ..|+++++||||.
T Consensus 120 ~~f~~igD~~~~~---~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~ 196 (424)
T 2qfp_A 120 YTFGLIGDLGQSF---DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEI 196 (424)
T ss_dssp EEEEEECSCTTBH---HHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHH
T ss_pred eEEEEEEeCCCCC---ChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCccc
Confidence 7999999999742 112334444332 3899999999999621 12233333 3689999999996
Q ss_pred cc-----------------CCCC---------ceEEEE-----------------------------------CCEEEEE
Q 029615 67 ET-----------------RYPE---------TKTLTI-----------------------------------GQFKLGL 85 (190)
Q Consensus 67 ~~-----------------~~p~---------~~~~~~-----------------------------------~~~~i~~ 85 (190)
.. .+|. ...++. ..++|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 276 (424)
T 2qfp_A 197 EFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVL 276 (424)
T ss_dssp CCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEE
T ss_pred ccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEE
Confidence 41 1221 111211 1256777
Q ss_pred eecCccCC----CCC----HHHHHHHhhcCCccEEEECcccCcceEE-------------------ecCeEEEccCCCcC
Q 029615 86 CHGHQVIP----WGD----LDSLAMLQRQLDVDILVTGHTHQFTAYK-------------------HEGGVVINPGSATG 138 (190)
Q Consensus 86 ~Hg~~~~~----~~~----~~~l~~~~~~~~~~~~i~GH~H~~~~~~-------------------~~~~~~inpGs~~~ 138 (190)
.|.+.+.. +.+ .+.+..++++++++++++||+|...... .++..+|..|+.+.
T Consensus 277 ~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~ 356 (424)
T 2qfp_A 277 MHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGN 356 (424)
T ss_dssp CSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCT
T ss_pred eCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCC
Confidence 77665432 111 1344566778899999999999854321 13467787777654
Q ss_pred CCCC---C----C-----CCCCCcEEEEEEeCC-eEEEEEEEeeCCeE-EEEEEEEeeC
Q 029615 139 AFSS---I----T-----YDVNPSFVLMDIDGL-RVVVYVYELIDGEV-KVDKIDFKKT 183 (190)
Q Consensus 139 ~~~~---~----~-----~~~~~~y~ll~~~~~-~~~~~~~~i~~~~~-~~~~~~~~~~ 183 (190)
.... . . .....+|+.+++.++ .+.++++.-.++++ ...++++.|+
T Consensus 357 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~ 415 (424)
T 2qfp_A 357 YGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNR 415 (424)
T ss_dssp TSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECT
T ss_pred ccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEec
Confidence 2110 0 0 123568999999654 68888886655554 4678888776
No 31
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.37 E-value=5.4e-12 Score=104.18 Aligned_cols=64 Identities=22% Similarity=0.204 Sum_probs=44.5
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcC--------CCccEEEEcCCCCC-----HHHHHHHhhh-------CCcEEEe
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVP--------GKIQHIVCTGNLCI-----KEVHDYLKII-------CPDLHII 60 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~--------~~~D~vi~~GDl~~-----~~~~~~l~~l-------~~~~~~v 60 (190)
+|||+++||+|+.. ..+.+ +.+.+.. .++|.++++||++| .++++.|.++ +.+++++
T Consensus 70 ~~~i~vigDiHG~~--~~l~~-ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v 146 (342)
T 2z72_A 70 IKKVVALSDVHGQY--DVLLT-LLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLL 146 (342)
T ss_dssp CCEEEEECCCTTCH--HHHHH-HHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEEECCCCCH--HHHHH-HHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 48999999999842 12222 2222211 25899999999998 4666666554 3579999
Q ss_pred cCCcccc
Q 029615 61 RGEYDEE 67 (190)
Q Consensus 61 ~GNHD~~ 67 (190)
+||||..
T Consensus 147 ~GNHE~~ 153 (342)
T 2z72_A 147 MGNHEQM 153 (342)
T ss_dssp CCHHHHH
T ss_pred ecCCcHH
Confidence 9999974
No 32
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.36 E-value=3.1e-12 Score=102.88 Aligned_cols=63 Identities=19% Similarity=0.250 Sum_probs=46.9
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcC-CCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEecCCcccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVP-GKIQHIVCTGNLCI-----KEVHDYLKIICPDLHIIRGEYDEE 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
|||+++||+|+... .+ .++.+.+.. .++|.++++||+++ .++++.|.++..++++|+||||..
T Consensus 1 M~i~vigDiHG~~~--~l-~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYD--EL-IALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHH--HH-HHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHH--HH-HHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCcHH
Confidence 89999999998421 22 233333333 46899999999998 467888888766899999999976
No 33
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.36 E-value=2.1e-11 Score=104.51 Aligned_cols=156 Identities=15% Similarity=0.142 Sum_probs=94.5
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCC-CccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCccccc---
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPG-KIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEET--- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~~--- 68 (190)
||++++||+|+.. ..+.+ +.+..... ..|.++++||++| .+++..|.++ +.++++++||||...
T Consensus 213 ~~~~vigDiHG~~--~~l~~-~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~ 289 (477)
T 1wao_1 213 EKITVCGDTHGQF--YDLLN-IFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQ 289 (477)
T ss_dssp CEEEEECBCTTCH--HHHHH-HHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHH
T ss_pred cceEEEeCCCCCH--HHHHH-HHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhh
Confidence 7899999999842 12323 22222222 3467999999999 4677766554 457999999999652
Q ss_pred -------------------------CCCCceEEEECCEEEEEeecCccCCC-----------------------------
Q 029615 69 -------------------------RYPETKTLTIGQFKLGLCHGHQVIPW----------------------------- 94 (190)
Q Consensus 69 -------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~----------------------------- 94 (190)
.+|.... ++ .+++++||.+..+.
T Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~lp~~~~--~~-~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~~~~dllWsd 366 (477)
T 1wao_1 290 IYGFEGEVKAKYTAQMYELFSEVFEWLPLAQC--IN-GKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSD 366 (477)
T ss_dssp HHSHHHHHHHHSCTTHHHHHHHHHTTSCSEEE--ET-TTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSSHHHHHHHCE
T ss_pred hcChHHHHHHHhhHHHHHHHHHHhccCCcEEE--Ec-CcEEEECCCCCccccCCHHHHHhccCCCCCchhhhhhhhccCC
Confidence 1333222 33 36999998652110
Q ss_pred -----------------CCHHHHHHHhhcCCccEEEECcccCcceEEe--cCeE-EEccCCCcCCCCCCCCCCCCcEEEE
Q 029615 95 -----------------GDLDSLAMLQRQLDVDILVTGHTHQFTAYKH--EGGV-VINPGSATGAFSSITYDVNPSFVLM 154 (190)
Q Consensus 95 -----------------~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~~--~~~~-~inpGs~~~~~~~~~~~~~~~y~ll 154 (190)
.+++.+.++++..+.++++.||++.+.-++. ++.. -|-..+ .+. ......=+++
T Consensus 367 p~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~-~y~-----~~~~n~~~~~ 440 (477)
T 1wao_1 367 PQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAP-NYC-----DQMGNKASYI 440 (477)
T ss_dssp ECSSSSCEECTTSSSEEECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCT-TTT-----SSSCCEEEEE
T ss_pred CCccCCcCcCCCCCceeECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCc-ccc-----cCCCccEEEE
Confidence 0234556677788999999999998754443 3322 221111 110 1123344667
Q ss_pred EEeCCeEEEEEEEee
Q 029615 155 DIDGLRVVVYVYELI 169 (190)
Q Consensus 155 ~~~~~~~~~~~~~i~ 169 (190)
.++++.++.+|....
T Consensus 441 ~~~~~~~~~~~~~~~ 455 (477)
T 1wao_1 441 HLQGSDLRPQFHQFT 455 (477)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEECCCCeEEEEEEe
Confidence 776777776666654
No 34
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=99.19 E-value=6.4e-10 Score=90.49 Aligned_cols=157 Identities=17% Similarity=0.169 Sum_probs=93.7
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCC-CccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCccccc---
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPG-KIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEET--- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~~--- 68 (190)
||+.++||+|+.. .++.+.|.. .... ..+.++++||++| .|++..|.++ +..+++++||||...
T Consensus 60 ~ri~viGDIHG~~--~~L~~ll~~-~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~ 136 (315)
T 3h63_A 60 EKITVCGDTHGQF--YDLLNIFEL-NGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQ 136 (315)
T ss_dssp CEEEEECCCTTCH--HHHHHHHHH-HCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHH
T ss_pred ceEEEEecCCCCH--HHHHHHHHH-hCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccc
Confidence 7899999999842 133333322 2222 3456999999999 4677776654 357999999999763
Q ss_pred -------------------------CCCCceEEEECCEEEEEeecCccCCC-----------------------------
Q 029615 69 -------------------------RYPETKTLTIGQFKLGLCHGHQVIPW----------------------------- 94 (190)
Q Consensus 69 -------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~----------------------------- 94 (190)
.+|...+ +++ +++++||....++
T Consensus 137 ~ygf~~e~~~k~~~~l~~~~~~~f~~LPla~i--i~~-~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g~~~dllWsD 213 (315)
T 3h63_A 137 IYGFEGEVKAKYTAQMYELFSEVFEWLPLAQC--ING-KVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSD 213 (315)
T ss_dssp HHSHHHHHHHHSCHHHHHHHHHHHTTSCSEEE--ETT-TEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSSHHHHHHHCE
T ss_pred cccccHHHHHHhhhHHHHHHHHHHhcCCcEEE--EcC-CEEEeCCCCCCcccCCHHHHHhCcccccccccchhhhheecC
Confidence 2343332 333 6999999763221
Q ss_pred -----------------CCHHHHHHHhhcCCccEEEECcccCcceEE--ecCeEEEccCCCcCCCCCCCCCCCCcEEEEE
Q 029615 95 -----------------GDLDSLAMLQRQLDVDILVTGHTHQFTAYK--HEGGVVINPGSATGAFSSITYDVNPSFVLMD 155 (190)
Q Consensus 95 -----------------~~~~~l~~~~~~~~~~~~i~GH~H~~~~~~--~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~ 155 (190)
.+++...+++++.+.++++=||.-...-++ .++. ++..=|..- .....+ ..=|++.
T Consensus 214 P~~~~g~~~s~RG~g~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~-~iTvfSapn--Y~~~~~--N~~a~~~ 288 (315)
T 3h63_A 214 PQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGR-CVTVFSAPN--YCDQMG--NKASYIH 288 (315)
T ss_dssp ECSSSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGT-EEEECCCTT--GGGTSC--CCEEEEE
T ss_pred CCCCCCcCcCCCCceEEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCe-EEEEECCcc--cCCCCC--ccEEEEE
Confidence 023445667788899999999998653332 2332 232222110 011122 3345667
Q ss_pred EeCCeEEEEEEEee
Q 029615 156 IDGLRVVVYVYELI 169 (190)
Q Consensus 156 ~~~~~~~~~~~~i~ 169 (190)
++++.++.++....
T Consensus 289 ~~~~~~~~~~~~f~ 302 (315)
T 3h63_A 289 LQGSDLRPQFHQFT 302 (315)
T ss_dssp EETTEEEEEEEEEC
T ss_pred EECCCCeEeeEEEe
Confidence 76777766666553
No 35
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=99.13 E-value=5.1e-09 Score=90.63 Aligned_cols=65 Identities=11% Similarity=0.060 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCCC-----Ch--HHHHHhhhcCC----Cc-cEEEEcCCCCC----------HHHHHHHhhhCCcEEE
Q 029615 2 VLVLALGDLHIPHRAA-----DL--PAKFKSMLVPG----KI-QHIVCTGNLCI----------KEVHDYLKIICPDLHI 59 (190)
Q Consensus 2 mri~~iSD~H~~~~~~-----~~--~~~l~~~~~~~----~~-D~vi~~GDl~~----------~~~~~~l~~l~~~~~~ 59 (190)
|||+++||+|+..... .+ .+.+.+.++++ ++ ++++.+||+++ ....+.|++++. -++
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg~-d~~ 87 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY-DAM 87 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTC-CEE
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccCC-CEE
Confidence 7999999999842210 11 12233322221 34 79999999987 134567777764 478
Q ss_pred ecCCcccc
Q 029615 60 IRGEYDEE 67 (190)
Q Consensus 60 v~GNHD~~ 67 (190)
+.||||..
T Consensus 88 ~~GNHEfd 95 (516)
T 1hp1_A 88 AIGNHEFD 95 (516)
T ss_dssp ECCGGGGS
T ss_pred eecccccc
Confidence 89999985
No 36
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=99.07 E-value=5.7e-09 Score=90.61 Aligned_cols=32 Identities=38% Similarity=0.640 Sum_probs=28.9
Q ss_pred CCccEEEECcccCcceEEecCeEEEccCCCcC
Q 029615 107 LDVDILVTGHTHQFTAYKHEGGVVINPGSATG 138 (190)
Q Consensus 107 ~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~ 138 (190)
.++|++++||+|.......+++++++||+.+.
T Consensus 238 ~giDlIlgGHtH~~~~~~v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 238 KDIDIFITGHQHRQIAERFKQTAVIQPGTRGT 269 (527)
T ss_dssp GGCSEEECCSSCCEEEEEETTEEEEEECSTTS
T ss_pred CCCcEEEECCCCcccceEECCEEEeccChhhC
Confidence 58999999999998877889999999999874
No 37
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=99.00 E-value=1.4e-08 Score=82.48 Aligned_cols=63 Identities=19% Similarity=0.195 Sum_probs=45.9
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCcccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEE 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
|+|.++||+|+.. ..+.+ +.+.......+.++++||++| .+++..|.++ +..+++++||||..
T Consensus 50 ~~i~viGDIHG~~--~~L~~-ll~~~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 50 CPVTVCGDVHGQF--HDLME-LFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp SSEEEECCCTTCH--HHHHH-HHHHHCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred CCEEEEecCCCCH--HHHHH-HHHHcCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 6899999999842 13322 333344456788999999999 4677777654 34799999999986
No 38
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=98.99 E-value=4.8e-09 Score=86.00 Aligned_cols=115 Identities=15% Similarity=0.117 Sum_probs=76.5
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCC-CccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCccccc---
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPG-KIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEET--- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~~--- 68 (190)
||+.++||+|+.. ..+.+ +.+.+... .-+.++++||++| .+++..|.++ +..+++++||||...
T Consensus 64 ~ri~viGDIHG~~--~~L~~-ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~ 140 (335)
T 3icf_A 64 VKISVCGDTHGQF--YDVLN-LFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNK 140 (335)
T ss_dssp CEEEEECCCTTCH--HHHHH-HHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHH
T ss_pred ceEEEEecCCCCH--HHHHH-HHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhh
Confidence 7899999999842 13333 23323323 2356999999999 4667766554 257999999999752
Q ss_pred -------------------------CCCCceEEEECCEEEEEeecCccCCC-----------------------------
Q 029615 69 -------------------------RYPETKTLTIGQFKLGLCHGHQVIPW----------------------------- 94 (190)
Q Consensus 69 -------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~----------------------------- 94 (190)
.+|...+ +++ +++++||....+.
T Consensus 141 ~ygf~~e~~~k~~~~l~~~~~~~f~~LPlaai--i~~-~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g~~~dlLWSD 217 (335)
T 3icf_A 141 IYGFEDECKYKYSQRIFNMFAQSFESLPLATL--INN-DYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWAD 217 (335)
T ss_dssp HHSHHHHHHHHSCHHHHHHHHHHHTTSCSEEE--ETT-TEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSSHHHHHHHCE
T ss_pred ccccchHhHhhccHHHHHHHHHHHhhcceeEE--EcC-cEEEecCCcCCCccCCHHHHHhCccccccccccchhhhhccC
Confidence 2444332 344 7999998763211
Q ss_pred -----------------CCHHHHHHHhhcCCccEEEECcccCcce
Q 029615 95 -----------------GDLDSLAMLQRQLDVDILVTGHTHQFTA 122 (190)
Q Consensus 95 -----------------~~~~~l~~~~~~~~~~~~i~GH~H~~~~ 122 (190)
.+++...+++++.+.++++=||.-...-
T Consensus 218 P~~~~g~~~s~RG~g~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~G 262 (335)
T 3icf_A 218 PQEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGG 262 (335)
T ss_dssp ECSSSSEEECCCC--EEECHHHHHHHHHHTTCSEEEECSSCCTEE
T ss_pred CCCcCCcccCCCCCceeeCHHHHHHHHHHCCCeEEEEcCceecCe
Confidence 0234566788889999999999976533
No 39
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.92 E-value=2.7e-08 Score=86.85 Aligned_cols=65 Identities=6% Similarity=0.052 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCCCC------------Ch--HHHHHhhhcCCCcc-EEEEcCCCCC----------HHHHHHHhhhCCc
Q 029615 2 VLVLALGDLHIPHRAA------------DL--PAKFKSMLVPGKIQ-HIVCTGNLCI----------KEVHDYLKIICPD 56 (190)
Q Consensus 2 mri~~iSD~H~~~~~~------------~~--~~~l~~~~~~~~~D-~vi~~GDl~~----------~~~~~~l~~l~~~ 56 (190)
+||+++||+|+..... .+ .+.+.+.++++.+| .++.+||+++ ....+.|++++.
T Consensus 30 l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg~- 108 (552)
T 2z1a_A 30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRY- 108 (552)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTTC-
T ss_pred EEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcCC-
Confidence 6899999999742211 11 22233333445677 8899999997 234566777654
Q ss_pred EEEecCCcccc
Q 029615 57 LHIIRGEYDEE 67 (190)
Q Consensus 57 ~~~v~GNHD~~ 67 (190)
-+++.||||..
T Consensus 109 d~~~lGNHEfd 119 (552)
T 2z1a_A 109 RAMALGNHEFD 119 (552)
T ss_dssp CEEECCGGGGT
T ss_pred Ccccccccccc
Confidence 47889999986
No 40
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=98.91 E-value=1.5e-08 Score=81.92 Aligned_cols=114 Identities=18% Similarity=0.161 Sum_probs=76.9
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCccccc----
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEET---- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~~---- 68 (190)
++|+++||+|+.. ..+.+ +.+.......+.++++||++| .|++..|.++ +..+++++||||...
T Consensus 56 ~~i~viGDIHG~~--~~L~~-ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ 132 (299)
T 3e7a_A 56 APLKICGDIHGQY--YDLLR-LFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 132 (299)
T ss_dssp SSEEEECBCTTCH--HHHHH-HHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHH
T ss_pred CCEEEEecCCCCH--HHHHH-HHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhccc
Confidence 4789999999842 23333 333334456788999999999 4677766554 347999999999862
Q ss_pred ------------------------CCCCceEEEECCEEEEEeecCccC------------------------------CC
Q 029615 69 ------------------------RYPETKTLTIGQFKLGLCHGHQVI------------------------------PW 94 (190)
Q Consensus 69 ------------------------~~p~~~~~~~~~~~i~~~Hg~~~~------------------------------~~ 94 (190)
.+|...+ +++ +++++||.... |.
T Consensus 133 ygF~~e~~~ky~~~l~~~~~~~f~~LPlaai--i~~-~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~~~~dllWsDP~ 209 (299)
T 3e7a_A 133 YGFYDECKRRYNIKLWKTFTDCFNCLPIAAI--VDE-KIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPD 209 (299)
T ss_dssp HSHHHHHHHHSCHHHHHHHHHHHTTCCCEEE--ETT-TEEEESSCCCTTCCCTHHHHTCCSSCCCCSSSHHHHHHHCEEC
T ss_pred ccchHHHHHHhhHHHHHHHHHHHhhCCceEE--ECC-eEEEEcCccCcccCCHHHHHhccCCCcCCcchhhhhhhcCCcc
Confidence 2344333 333 69999986421 00
Q ss_pred ----------------CCHHHHHHHhhcCCccEEEECcccCcc
Q 029615 95 ----------------GDLDSLAMLQRQLDVDILVTGHTHQFT 121 (190)
Q Consensus 95 ----------------~~~~~l~~~~~~~~~~~~i~GH~H~~~ 121 (190)
.+++.+.+++++.+.++++-||.=...
T Consensus 210 ~~~~~~~~~~RG~~~~fG~~~~~~fl~~n~l~~IiR~Hq~v~~ 252 (299)
T 3e7a_A 210 KDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVED 252 (299)
T ss_dssp TTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTT
T ss_pred ccccCcccCCCCcceeeCHHHHHHHHHHCCCeEEEEcCeeeec
Confidence 123456677888899999999997643
No 41
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.91 E-value=5.8e-08 Score=83.95 Aligned_cols=32 Identities=31% Similarity=0.400 Sum_probs=26.4
Q ss_pred CCccEEEECcccCcc--eEEecCeEEEccCCCcC
Q 029615 107 LDVDILVTGHTHQFT--AYKHEGGVVINPGSATG 138 (190)
Q Consensus 107 ~~~~~~i~GH~H~~~--~~~~~~~~~inpGs~~~ 138 (190)
.++|+++.||+|... ....+++.++.+|+.+.
T Consensus 224 ~giDlIlgGHtH~~~~~~~~~~~~~ivqag~~g~ 257 (509)
T 3ive_A 224 KGLDILITGHAHVGTPEPIKVGNTLILSTDSGGI 257 (509)
T ss_dssp SSCCEEEEESSCCCCSSCEEETTEEEECCCSTTS
T ss_pred CCCcEEEeCCcCccCCCCeeeCCEEEEecChhhc
Confidence 579999999999854 34678899999998774
No 42
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.83 E-value=3.8e-07 Score=79.81 Aligned_cols=119 Identities=15% Similarity=0.245 Sum_probs=75.3
Q ss_pred cc-EEEEcCCCCC----------HHHHHHHhhhCCcEEEecCCcccccC------------C-----------------C
Q 029615 32 IQ-HIVCTGNLCI----------KEVHDYLKIICPDLHIIRGEYDEETR------------Y-----------------P 71 (190)
Q Consensus 32 ~D-~vi~~GDl~~----------~~~~~~l~~l~~~~~~v~GNHD~~~~------------~-----------------p 71 (190)
+| .++.+||+++ ....+.|++++.++. + ||||...+ + +
T Consensus 123 pd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~ 200 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFP 200 (562)
T ss_dssp CCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSC
T ss_pred CCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcEE-e-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCcccC
Confidence 88 8999999998 234577888876664 7 99998531 1 1
Q ss_pred CceEEEECCEEEEEeecCc-c----CC--------CC---------------------------CHHHHHHHhhc-CCcc
Q 029615 72 ETKTLTIGQFKLGLCHGHQ-V----IP--------WG---------------------------DLDSLAMLQRQ-LDVD 110 (190)
Q Consensus 72 ~~~~~~~~~~~i~~~Hg~~-~----~~--------~~---------------------------~~~~l~~~~~~-~~~~ 110 (190)
...+++.+|.+|.++=-.. . .+ .. +.+.-.+++++ .++|
T Consensus 201 py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~iIvLsH~g~~~d~~la~~~~giD 280 (562)
T 2wdc_A 201 AYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGID 280 (562)
T ss_dssp SEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTCSEEEEEECSCHHHHHHHHTTSSSCC
T ss_pred CeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCCCEEEEEeCCCCcchHHHHhcCCCCc
Confidence 2245677888887653110 0 00 00 00111234444 5899
Q ss_pred EEEECcccCcce--EEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCeE
Q 029615 111 ILVTGHTHQFTA--YKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRV 161 (190)
Q Consensus 111 ~~i~GH~H~~~~--~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~~ 161 (190)
++++||+|.... ...++++++.+|+.+.. -+..-++++++++
T Consensus 281 lIlgGHtH~~~~~~~~~~~t~vvqag~~g~~---------lg~i~l~~~~g~v 324 (562)
T 2wdc_A 281 LILSGHTHDLTPRPWRVGKTWIVAGSAAGKA---------LMRVDLKLWKGGI 324 (562)
T ss_dssp EEEECSSCCCCSSCEEETTEEEEECCSTTCE---------EEEEEEEEETTEE
T ss_pred EEEeCCCCCCCccCEEECCEEEEecCccccE---------EEEEEEEEeCCcE
Confidence 999999998653 34588999999998852 3555556666654
No 43
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=98.82 E-value=4.7e-08 Score=83.87 Aligned_cols=63 Identities=21% Similarity=0.167 Sum_probs=45.5
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCcccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEE 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
|++.++||+|+... ++.+ +.+.......|.++++||++| .+++.+|.++ +..+++++||||..
T Consensus 83 ~pI~VIGDIHGq~~--dL~~-LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFF--DLMK-LFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHH--HHHH-HHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHH--HHHH-HHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 68999999998421 3333 333333456799999999999 4677777654 24699999999976
No 44
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=98.80 E-value=8.9e-09 Score=84.36 Aligned_cols=63 Identities=16% Similarity=0.066 Sum_probs=45.8
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCcccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEE 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
|++.++||+|+.. ..+.+ +.+.......|.++++||++| .++++.|.++ +..+++++||||..
T Consensus 57 ~~i~viGDIHG~~--~~L~~-ll~~~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQY--YDLLR-LFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCH--HHHHH-HHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCH--HHHHH-HHHHhCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 5799999999842 13333 333334456788999999999 5777777654 35799999999976
No 45
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.79 E-value=2.5e-07 Score=81.21 Aligned_cols=66 Identities=9% Similarity=0.020 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCCCCC---------------hHHHHHh---hhcCCCcc-EEEEcCCCCC----------HHHHHHHhh
Q 029615 2 VLVLALGDLHIPHRAAD---------------LPAKFKS---MLVPGKIQ-HIVCTGNLCI----------KEVHDYLKI 52 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~---------------~~~~l~~---~~~~~~~D-~vi~~GDl~~----------~~~~~~l~~ 52 (190)
++|+++||+|+...... -.+++.. .++++.++ +++.+||+++ ....+.|++
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~ 92 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMNA 92 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHHH
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHHh
Confidence 68999999997432211 0222333 23334455 8899999997 235677777
Q ss_pred hCCcEEEecCCccccc
Q 029615 53 ICPDLHIIRGEYDEET 68 (190)
Q Consensus 53 l~~~~~~v~GNHD~~~ 68 (190)
++.. +++.||||+..
T Consensus 93 lg~D-~~tlGNHEfd~ 107 (579)
T 3ztv_A 93 GNFH-YFTLGNHEFDA 107 (579)
T ss_dssp HTCS-EEECCSGGGTT
T ss_pred cCcC-eeecccccccc
Confidence 7654 57899999863
No 46
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=98.64 E-value=3.3e-07 Score=78.08 Aligned_cols=149 Identities=15% Similarity=0.218 Sum_probs=95.6
Q ss_pred EEEEEecCCCCCCCCC---hHHHHHhhhc-----------CCCccEEEEcCCCCCH-----------------------H
Q 029615 3 LVLALGDLHIPHRAAD---LPAKFKSMLV-----------PGKIQHIVCTGNLCIK-----------------------E 45 (190)
Q Consensus 3 ri~~iSD~H~~~~~~~---~~~~l~~~~~-----------~~~~D~vi~~GDl~~~-----------------------~ 45 (190)
+|+++||+|.+..... -.+.|.+++. ..++..+|++||+++. +
T Consensus 202 ~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~~~ 281 (476)
T 3e0j_A 202 FVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVE 281 (476)
T ss_dssp EEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHHHH
T ss_pred EEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhhHH
Confidence 7999999998654211 1234556552 2468999999999971 1
Q ss_pred HH----HHHhhhC--CcEEEecCCccccc-CCC----------------------CceEEEECCEEEEEeecCcc-----
Q 029615 46 VH----DYLKIIC--PDLHIIRGEYDEET-RYP----------------------ETKTLTIGQFKLGLCHGHQV----- 91 (190)
Q Consensus 46 ~~----~~l~~l~--~~~~~v~GNHD~~~-~~p----------------------~~~~~~~~~~~i~~~Hg~~~----- 91 (190)
.+ ++|.++. .++.+.|||||... .+| ....++++|++|+.+||...
T Consensus 282 ~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqnidDi~k 361 (476)
T 3e0j_A 282 AVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFR 361 (476)
T ss_dssp HHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCCHHHHHh
Confidence 11 2334442 68999999999874 122 23567899999999998652
Q ss_pred -CCCCCHH-HHHH-------------------------HhhcCCccEEEECcccCcceEEec-----CeEEEccCCCcCC
Q 029615 92 -IPWGDLD-SLAM-------------------------LQRQLDVDILVTGHTHQFTAYKHE-----GGVVINPGSATGA 139 (190)
Q Consensus 92 -~~~~~~~-~l~~-------------------------~~~~~~~~~~i~GH~H~~~~~~~~-----~~~~inpGs~~~~ 139 (190)
.+...+- .++. +.-..-++++++||.|........ .+++|+..+++.
T Consensus 362 y~~~~~~l~~me~~LkwrHlAPTaPdTl~~yP~~~~DpfVi~~~PhVyf~Gnq~~f~t~~~~~~~~~~vrLv~VP~Fs~- 440 (476)
T 3e0j_A 362 YSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFSA- 440 (476)
T ss_dssp HSCCCCHHHHHHHHHHBTCSCTTSCCC------CCSCTTSCSSCCSEEEEEEESSCEEEEEECSSCCEEEEEEEECHHH-
T ss_pred cCCCCCHHHHHHHHHHHhccCCCCCCceeeccCCCCCceeecCCCcEEEeCCCCccceeEEecCCCCeEEEEEcCCcCC-
Confidence 1111111 0111 112335789999999998765542 367788777775
Q ss_pred CCCCCCCCCCcEEEEEEeCCe
Q 029615 140 FSSITYDVNPSFVLMDIDGLR 160 (190)
Q Consensus 140 ~~~~~~~~~~~y~ll~~~~~~ 160 (190)
.++.+++++..-.
T Consensus 441 --------T~~~vLvdl~tLe 453 (476)
T 3e0j_A 441 --------TQTACLVNLRSLA 453 (476)
T ss_dssp --------HCEEEEEETTTTB
T ss_pred --------CCeEEEEECcccc
Confidence 4788888877543
No 47
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=98.63 E-value=3.7e-08 Score=81.23 Aligned_cols=63 Identities=21% Similarity=0.172 Sum_probs=45.7
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEecCCcccc
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI-----KEVHDYLKII----CPDLHIIRGEYDEE 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
++++++||+|+.. .++.+ +.+.......|.++++||++| .|++..|.++ +..+++++||||..
T Consensus 70 ~pi~ViGDIHG~~--~dL~~-ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQF--FDLMK-LFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCH--HHHHH-HHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCH--HHHHH-HHHhcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 5799999999842 13333 333334567789999999999 4667766554 24799999999986
No 48
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.60 E-value=1.3e-06 Score=76.08 Aligned_cols=64 Identities=14% Similarity=0.236 Sum_probs=41.9
Q ss_pred eEEEEEecCCCCCCCC---------------ChHHHHHh---hhcCCCc-cEEEEcCCCCC----------HHHHHHHhh
Q 029615 2 VLVLALGDLHIPHRAA---------------DLPAKFKS---MLVPGKI-QHIVCTGNLCI----------KEVHDYLKI 52 (190)
Q Consensus 2 mri~~iSD~H~~~~~~---------------~~~~~l~~---~~~~~~~-D~vi~~GDl~~----------~~~~~~l~~ 52 (190)
++|+++||+|+..... .+ +++.. .++++.+ ++++.+||+++ ....+.|++
T Consensus 26 l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~-a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~ 104 (546)
T 4h2g_A 26 LTILHTNDVHSRLEQTSEDSSKCVDASRCMGGV-ARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 104 (546)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCH-HHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEecccccCCcccccccccccccccccCCH-HHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHh
Confidence 6899999999742211 11 22333 2333344 69999999998 234567777
Q ss_pred hCCcEEEecCCcccc
Q 029615 53 ICPDLHIIRGEYDEE 67 (190)
Q Consensus 53 l~~~~~~v~GNHD~~ 67 (190)
++.. +++.||||+.
T Consensus 105 lg~d-~~~~GNHEfd 118 (546)
T 4h2g_A 105 LRYD-AMALGNHEFD 118 (546)
T ss_dssp HTCS-EEECCGGGGT
T ss_pred cCCc-EEeccCcccc
Confidence 7654 6889999965
No 49
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.58 E-value=1.8e-06 Score=70.97 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=26.6
Q ss_pred hcCCccEEEECcccCcce--------------EEecCeEEEccCCCcC
Q 029615 105 RQLDVDILVTGHTHQFTA--------------YKHEGGVVINPGSATG 138 (190)
Q Consensus 105 ~~~~~~~~i~GH~H~~~~--------------~~~~~~~~inpGs~~~ 138 (190)
+-.++|+++.||+|.... ...++++++.||+.+.
T Consensus 231 ~v~gID~IlgGHsH~~~~~~~~~~~~g~~~~~g~vn~v~vvqag~~G~ 278 (339)
T 3jyf_A 231 QVPGVDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGD 278 (339)
T ss_dssp TSTTCCEEEECSSCSEESSGGGTTSTTEETTTTEETTEEEEEECSTTS
T ss_pred hCCCCCEEEeCCCccccccccccccCCccccCccCCCEEEEcCCcccc
Confidence 446899999999998642 1456889999999885
No 50
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.50 E-value=3e-06 Score=69.66 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=25.8
Q ss_pred cCCccEEEECcccCcceE--------------EecCeEEEccCCCcC
Q 029615 106 QLDVDILVTGHTHQFTAY--------------KHEGGVVINPGSATG 138 (190)
Q Consensus 106 ~~~~~~~i~GH~H~~~~~--------------~~~~~~~inpGs~~~ 138 (190)
-.++|+++.||+|..... ..++++++.||+.+.
T Consensus 239 v~giD~IigGHsH~~~~~~~~~~~~~~~~~~g~v~~~~vvqag~~g~ 285 (341)
T 3gve_A 239 TKGIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVMPSSWGK 285 (341)
T ss_dssp CSCCCEEEECSSCCEESCGGGTTSTTEETTTTEETTEEEEEECSTTS
T ss_pred CCCCcEEEECCCCccCCCcccccccccccccccCCCEEEEeCChhhc
Confidence 368999999999986421 356789999998884
No 51
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=98.45 E-value=5e-06 Score=72.11 Aligned_cols=65 Identities=12% Similarity=0.200 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCCC---------------ChHHHHHhh---hcCCCcc-EEEEcCCCCC----------HHHHHHHhh
Q 029615 2 VLVLALGDLHIPHRAA---------------DLPAKFKSM---LVPGKIQ-HIVCTGNLCI----------KEVHDYLKI 52 (190)
Q Consensus 2 mri~~iSD~H~~~~~~---------------~~~~~l~~~---~~~~~~D-~vi~~GDl~~----------~~~~~~l~~ 52 (190)
.+|++++|+|+.-... .+ +++..+ +++++++ +++.+||++. ....+.|+.
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~-arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGV-ARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCH-HHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcH-HHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 5899999999732110 12 223332 2334444 6778999998 234566777
Q ss_pred hCCcEEEecCCccccc
Q 029615 53 ICPDLHIIRGEYDEET 68 (190)
Q Consensus 53 l~~~~~~v~GNHD~~~ 68 (190)
++. -..+.||||+..
T Consensus 83 lgy-Da~~lGNHEFd~ 97 (530)
T 4h1s_A 83 LRY-DAMALGNHEFDN 97 (530)
T ss_dssp TTC-CEEECCGGGGTT
T ss_pred cCC-CEEEEchhhhcc
Confidence 653 478899999874
No 52
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=98.35 E-value=4.5e-05 Score=66.17 Aligned_cols=72 Identities=10% Similarity=0.114 Sum_probs=46.4
Q ss_pred HHHHHhhcCCcc--EEEECcccCcceEEec-----------CeEEEccCCCcCCCC--------------CC--CCCCCC
Q 029615 99 SLAMLQRQLDVD--ILVTGHTHQFTAYKHE-----------GGVVINPGSATGAFS--------------SI--TYDVNP 149 (190)
Q Consensus 99 ~l~~~~~~~~~~--~~i~GH~H~~~~~~~~-----------~~~~inpGs~~~~~~--------------~~--~~~~~~ 149 (190)
.+..++++.+++ ++|+||.|......+. ++.++.++..+.... |. -.....
T Consensus 361 ~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~ 440 (527)
T 2yeq_A 361 RVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYR 440 (527)
T ss_dssp HHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCE
T ss_pred HHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCC
Confidence 445566677774 9999999998765431 244544332221110 00 011367
Q ss_pred cEEEEEEeCCeEEEEEEEeeC
Q 029615 150 SFVLMDIDGLRVVVYVYELID 170 (190)
Q Consensus 150 ~y~ll~~~~~~~~~~~~~i~~ 170 (190)
+|++++++.+.++++++.+.+
T Consensus 441 Gy~~v~vt~~~~~~~~~~v~~ 461 (527)
T 2yeq_A 441 GYVRCTVTPHQWKADYRVMPF 461 (527)
T ss_dssp EEEEEEEETTEEEEEEEEESC
T ss_pred CEEEEEEeccEEEEEEEEeCC
Confidence 899999999999999999854
No 53
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.22 E-value=3.4e-05 Score=67.34 Aligned_cols=65 Identities=8% Similarity=-0.061 Sum_probs=42.2
Q ss_pred eEEEEEecCCCCCCCC--------Ch--HHHHHhhhc----CCCccE-EEEcCCCCCH------------HHHHHHhhhC
Q 029615 2 VLVLALGDLHIPHRAA--------DL--PAKFKSMLV----PGKIQH-IVCTGNLCIK------------EVHDYLKIIC 54 (190)
Q Consensus 2 mri~~iSD~H~~~~~~--------~~--~~~l~~~~~----~~~~D~-vi~~GDl~~~------------~~~~~l~~l~ 54 (190)
++|++++|+|+..... .. .+++.+.++ ++++|. ++.+||+++. ...+.|++++
T Consensus 16 l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~lg 95 (557)
T 3c9f_A 16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD 95 (557)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC
T ss_pred EEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhcC
Confidence 7999999999843211 11 233333332 356784 7999999971 2355666765
Q ss_pred CcEEEecCCcccc
Q 029615 55 PDLHIIRGEYDEE 67 (190)
Q Consensus 55 ~~~~~v~GNHD~~ 67 (190)
. -+++.||||+.
T Consensus 96 ~-Da~tlGNHEfD 107 (557)
T 3c9f_A 96 Y-DLLTIGNHELY 107 (557)
T ss_dssp C-SEECCCGGGSS
T ss_pred C-CEEeecchhcc
Confidence 4 36688999986
No 54
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.21 E-value=1.5e-06 Score=69.57 Aligned_cols=126 Identities=15% Similarity=0.133 Sum_probs=75.8
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhh----cCCCccEEEEcCCCCC------HHHHHHHhhhCCcEEEecCCcccccC--
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSML----VPGKIQHIVCTGNLCI------KEVHDYLKIICPDLHIIRGEYDEETR-- 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~----~~~~~D~vi~~GDl~~------~~~~~~l~~l~~~~~~v~GNHD~~~~-- 69 (190)
|||+++||+|+.. .. +.+.+.+ ++.++|.++..||-.. ....+.|.+++..+ ...|||++...
T Consensus 5 m~ilf~GDv~G~~---G~-~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~Da-~TlGNHefD~g~~ 79 (281)
T 1t71_A 5 IKFIFLGDVYGKA---GR-NIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNY-ITMGNHTWFQKLD 79 (281)
T ss_dssp CEEEEECEEBHHH---HH-HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCE-EECCTTTTCCGGG
T ss_pred EEEEEECCcCChH---HH-HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCCE-EEEccCcccCCcc
Confidence 8999999999731 21 2222222 2235899988888764 56788888887644 45599998753
Q ss_pred ---------------CC----------CceEEEECCEEEEEee--cCc-cCC--CC------------------------
Q 029615 70 ---------------YP----------ETKTLTIGQFKLGLCH--GHQ-VIP--WG------------------------ 95 (190)
Q Consensus 70 ---------------~p----------~~~~~~~~~~~i~~~H--g~~-~~~--~~------------------------ 95 (190)
+| ...+++.+|.+|.++- |.. +.+ ..
T Consensus 80 ~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~~~~~diIIv~~H~ 159 (281)
T 1t71_A 80 LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILKRDCDLHIVDFHA 159 (281)
T ss_dssp HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTTCCCSEEEEEEEC
T ss_pred HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHhhcCCCEEEEEeCC
Confidence 11 1235677888876543 332 221 00
Q ss_pred -CHHHHHHHhhc--CCccEEEECcccCcceE-Ee--cCeEEEc
Q 029615 96 -DLDSLAMLQRQ--LDVDILVTGHTHQFTAY-KH--EGGVVIN 132 (190)
Q Consensus 96 -~~~~l~~~~~~--~~~~~~i~GH~H~~~~~-~~--~~~~~in 132 (190)
...+-..+++. .++|+++-||||.+... ++ +++.++.
T Consensus 160 g~t~Ek~~la~~~dg~VD~VvGgHTHv~t~d~~il~~gt~~i~ 202 (281)
T 1t71_A 160 ETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYIT 202 (281)
T ss_dssp SCHHHHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEES
T ss_pred CchHHHHHHHHhCCCCeEEEEeCCCCcCCCceEEecCCcEEEe
Confidence 01111223332 25999999999997643 22 6777775
No 55
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.00067 Score=57.60 Aligned_cols=48 Identities=25% Similarity=0.257 Sum_probs=38.0
Q ss_pred CCccEEEECcccCcceEEecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCC
Q 029615 107 LDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGL 159 (190)
Q Consensus 107 ~~~~~~i~GH~H~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~ 159 (190)
..+|++|..=--.++....++..+||||.+... ..+.++||.+.+..-
T Consensus 381 ~~PDilI~PS~l~~F~kvv~~~v~INPG~l~k~-----~~g~GTya~l~i~~~ 428 (460)
T 3flo_A 381 FSPDIMIIPSELQHFARVVQNVVVINPGRFIRA-----TGNRGSYAQITVQCP 428 (460)
T ss_dssp CCCSEEECCCSSCCEEEEETTEEEEECCCSBCT-----TSCBCEEEEEEECCC
T ss_pred CCCCEEEcCCCCcCceEEeCCEEEECcccccCC-----CCCCceeEEEEEeCC
Confidence 357788887777788888899999999999853 233589999999754
No 56
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.64 E-value=0.00022 Score=56.16 Aligned_cols=128 Identities=14% Similarity=0.100 Sum_probs=72.5
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcCCCCC------HHHHHHHhhhCCcEEEecCCcccccC------
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCI------KEVHDYLKIICPDLHIIRGEYDEETR------ 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~------~~~~~~l~~l~~~~~~v~GNHD~~~~------ 69 (190)
|||++++|+=+.... ...+.+.+.++++. |.++..|+-.. ....+.|.+++..+. ..|||++...
T Consensus 1 m~ilf~GDv~g~~G~-~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~Da~-TlGNHefD~~~l~~~l 77 (255)
T 1t70_A 1 MRVLFIGDVFGQPGR-RVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHRDAARGALEAGAGCL-TLGNHAWHHKDIYPML 77 (255)
T ss_dssp CEEEEECCBBHHHHH-HHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEE-ECCTTTTSSTTHHHHH
T ss_pred CEEEEEeccCChHHH-HHHHHHHHHHHhhC-CEEEECCCCccCCcCCCHHHHHHHHhCCCCEE-EeccccccCchHHHHH
Confidence 899999999752111 11222222233344 88777766553 567788888876554 4599997741
Q ss_pred ------------CC-------CceEEEECCEEEEEee--cCccCCC-C-------------------------CHHHHHH
Q 029615 70 ------------YP-------ETKTLTIGQFKLGLCH--GHQVIPW-G-------------------------DLDSLAM 102 (190)
Q Consensus 70 ------------~p-------~~~~~~~~~~~i~~~H--g~~~~~~-~-------------------------~~~~l~~ 102 (190)
+| ...+++.+|.+|.++- |..+.+. . ...+-..
T Consensus 78 ~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l~~d~IIv~~H~e~t~Ek~~ 157 (255)
T 1t70_A 78 SEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERDDLGTVFVDFHAEATSEKEA 157 (255)
T ss_dssp HTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCSSCCEEEEEEECSCHHHHHH
T ss_pred hhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHhCCCEEEEEeCCCChHHHHH
Confidence 12 1235666777766543 3222110 0 0111122
Q ss_pred Hhhc--CCccEEEECcccCcceEE-e--cCeEEEc
Q 029615 103 LQRQ--LDVDILVTGHTHQFTAYK-H--EGGVVIN 132 (190)
Q Consensus 103 ~~~~--~~~~~~i~GH~H~~~~~~-~--~~~~~in 132 (190)
+++. .++|+++-||||.+.... + +++.++.
T Consensus 158 la~~~dg~vd~VvGgHTHv~~~d~~il~~gt~~i~ 192 (255)
T 1t70_A 158 MGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQT 192 (255)
T ss_dssp HHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEES
T ss_pred HHHhCCCCeEEEEeCCCCcCCCceEEcCCCeEEEE
Confidence 3332 259999999999986532 2 7877775
No 57
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.51 E-value=0.00081 Score=52.82 Aligned_cols=128 Identities=17% Similarity=0.184 Sum_probs=74.0
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEc-CCCCC-----HHHHHHHhhhCCcEEEecCCcccccC------
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCT-GNLCI-----KEVHDYLKIICPDLHIIRGEYDEETR------ 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~-GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~~------ 69 (190)
|||++++|+=+......+...+.+ ++++. |+++.. ||.+. .+.++.|.+++..+. ..|||++...
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~-lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~-T~GNHefD~~~l~~~l 77 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPD-IRDRY-DLVIANGENAARGKGLDRRSYRLLREAGVDLV-SLGNHAWDHKEVYALL 77 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHH-HGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEE-ECCTTTTSCTTHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHH-HHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCCCEE-EeccEeeECchHHHHh
Confidence 899999999752211112222333 33344 776654 55544 677888988887665 6699997742
Q ss_pred ----------CCC------ceEEEECCEEEEEee--cCccCC-CCC-------------------------HHHHHHHhh
Q 029615 70 ----------YPE------TKTLTIGQFKLGLCH--GHQVIP-WGD-------------------------LDSLAMLQR 105 (190)
Q Consensus 70 ----------~p~------~~~~~~~~~~i~~~H--g~~~~~-~~~-------------------------~~~l~~~~~ 105 (190)
+|. ..+++.+|.+|.++- |..+.+ ..+ ..+-..++.
T Consensus 78 ~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk~d~IIv~~H~g~tsek~~la~ 157 (252)
T 2z06_A 78 ESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEKADYVLVEVHAEATSEKMALAH 157 (252)
T ss_dssp HHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCCCSEEEEEEECSCHHHHHHHHH
T ss_pred ccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhCCCEEEEEeCCCcHHHHHHHHH
Confidence 221 246778888887653 332221 111 111112222
Q ss_pred --cCCccEEEECcccCcceE--Ee-cCeEEEc
Q 029615 106 --QLDVDILVTGHTHQFTAY--KH-EGGVVIN 132 (190)
Q Consensus 106 --~~~~~~~i~GH~H~~~~~--~~-~~~~~in 132 (190)
..++|+++-||||.+... .. +++.|+.
T Consensus 158 ~~dg~Vd~VvGgHTHv~t~d~~il~~gt~~it 189 (252)
T 2z06_A 158 YLDGRASAVLGTHTHVPTLDATRLPKGTLYQT 189 (252)
T ss_dssp HHBTTBSEEEEESSCSCBSCCEECTTSCEEES
T ss_pred hCCCCeEEEEcCCCCcCCCccEEcCCCcEeec
Confidence 235999999999997542 23 6666664
No 58
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=86.27 E-value=0.38 Score=32.88 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=41.1
Q ss_pred CeEEEEEecCCCCC-------------CCCChHHHHHhhhcCCCccEEEEcCCCCC--HHHHHHHhhhCCc-EEEecCCc
Q 029615 1 MVLVLALGDLHIPH-------------RAADLPAKFKSMLVPGKIQHIVCTGNLCI--KEVHDYLKIICPD-LHIIRGEY 64 (190)
Q Consensus 1 mmri~~iSD~H~~~-------------~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~~l~~~-~~~v~GNH 64 (190)
+|||++++|--.-. ..++..+.|.+++++ ++..|+++=++.+ ++.++.+++...| ++.+|+++
T Consensus 2 ~mKiaVIGD~Dtv~GFrLaGie~~~v~~~ee~~~~~~~l~~~-digIIlIte~ia~~i~~~i~~~~~~~~P~IveIPs~~ 80 (115)
T 3aon_B 2 TYKIGVVGDKDSVSPFRLFGFDVQHGTTKTEIRKTIDEMAKN-EYGVIYITEQCANLVPETIERYKGQLTPAIILIPSHQ 80 (115)
T ss_dssp EEEEEEESCHHHHGGGGGGTCEEECCCSHHHHHHHHHHHHHT-TEEEEEEEHHHHTTCHHHHHHHHTSSSCEEEEECBTT
T ss_pred ceEEEEEECHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhc-CceEEEEeHHHHHHhHHHHHHHhCCCCCEEEEECCCC
Confidence 18999999943200 111234456666665 8999999988877 5556666654334 45688877
Q ss_pred cc
Q 029615 65 DE 66 (190)
Q Consensus 65 D~ 66 (190)
-.
T Consensus 81 g~ 82 (115)
T 3aon_B 81 GT 82 (115)
T ss_dssp BC
T ss_pred CC
Confidence 44
No 59
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=85.95 E-value=0.42 Score=32.30 Aligned_cols=64 Identities=14% Similarity=0.098 Sum_probs=42.5
Q ss_pred eEEEEEecCCC-------------CCCCCChHHHHHhhhcCCCccEEEEcCCCCC--HHHHHHHh-hhCCc-EEEecCCc
Q 029615 2 VLVLALGDLHI-------------PHRAADLPAKFKSMLVPGKIQHIVCTGNLCI--KEVHDYLK-IICPD-LHIIRGEY 64 (190)
Q Consensus 2 mri~~iSD~H~-------------~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~-~l~~~-~~~v~GNH 64 (190)
|||+++||--. ....+...+.|.+++++.++..|+++=++.+ ++.++.++ +...| ++.+|+.+
T Consensus 4 mkiaVIgD~dtv~GFrLaGi~~~~v~~~ee~~~~~~~l~~~~digIIlIte~~a~~i~~~i~~~~~~~~~P~Il~IPs~~ 83 (109)
T 2d00_A 4 VRMAVIADPETAQGFRLAGLEGYGASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLMRGRDLPVLLPIAGLK 83 (109)
T ss_dssp CCEEEEECHHHHHHHHHTTSEEEECSSHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHHHHHHTTCCCCCEEEEESCGG
T ss_pred cEEEEEeCHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHhhCCCeEEEEEeHHHHHhhHHHHHHHHhCCCCeEEEEECCCc
Confidence 89999999421 0011123455677666779999999999998 55666664 33334 56689888
Q ss_pred c
Q 029615 65 D 65 (190)
Q Consensus 65 D 65 (190)
+
T Consensus 84 ~ 84 (109)
T 2d00_A 84 E 84 (109)
T ss_dssp G
T ss_pred c
Confidence 4
No 60
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=76.47 E-value=0.96 Score=30.02 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=42.0
Q ss_pred eEEEEEecCCC--------------CCCCCChHHHHHhhhcCCCccEEEEcCCCCC--HHHH-HHHhh-hCCcEEEecCC
Q 029615 2 VLVLALGDLHI--------------PHRAADLPAKFKSMLVPGKIQHIVCTGNLCI--KEVH-DYLKI-ICPDLHIIRGE 63 (190)
Q Consensus 2 mri~~iSD~H~--------------~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~-~~l~~-l~~~~~~v~GN 63 (190)
|||++++|--. ....+...+.|.+++++.++..|+++=++.+ ++.+ +...+ ..+-++.+|++
T Consensus 1 MkiaVIGD~dtv~GFrLaGi~~v~~v~~~ee~~~~~~~l~~~~digIIlite~~a~~i~~~i~~~~~~~~~P~Iv~IP~~ 80 (101)
T 2ov6_A 1 MELAVIGKSEFVTGFRLAGISKVYETPDIPATESAVRSVLEDKSVGILVMHNDDIGNLPEVLRKNLNESVQPTVVALGGS 80 (101)
T ss_dssp CCEEEEECHHHHHHHHHHTCCEEEECCSTTTHHHHHHHHHHHTSSSEEEEEHHHHTTCTTTTHHHHHHHCCSCEEEECTT
T ss_pred CEEEEEECHHHHHHHHHcCCCceEecCCHHHHHHHHHHHhhCCCeEEEEEcHHHHHHhHHHHHHHHhCCCCcEEEEECCC
Confidence 78899988321 1122355667888777779999999988877 3333 55543 33446779999
Q ss_pred c
Q 029615 64 Y 64 (190)
Q Consensus 64 H 64 (190)
+
T Consensus 81 ~ 81 (101)
T 2ov6_A 81 G 81 (101)
T ss_dssp S
T ss_pred C
Confidence 8
No 61
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=55.81 E-value=6.5 Score=27.97 Aligned_cols=34 Identities=18% Similarity=0.049 Sum_probs=23.1
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcC
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTG 39 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~G 39 (190)
||||++.||--+ ..+.+.+.+.+++.+. -|+-.|
T Consensus 1 ~MkIaigsDhaG----~~lK~~i~~~L~~~G~-eV~D~G 34 (149)
T 2vvr_A 1 MKKIAFGCDHVG----FILKHEIVAHLVERGV-EVIDKG 34 (149)
T ss_dssp CCEEEEEECTTG----GGGHHHHHHHHHHTTC-EEEECC
T ss_pred CcEEEEEeCchh----HHHHHHHHHHHHHCCC-EEEEeC
Confidence 899999999654 2456667777755555 455555
No 62
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=52.56 E-value=20 Score=26.83 Aligned_cols=34 Identities=9% Similarity=-0.003 Sum_probs=27.5
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecC
Q 029615 29 PGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
+.+||.||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (256)
T 2r7a_A 57 SLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPR 90 (256)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecC
Confidence 5799999987754557788999999888888864
No 63
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=50.74 E-value=9.9 Score=31.69 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=17.9
Q ss_pred ECcccCcceEEecC-eEEEccCCCcCCCCCCCCCCCCcEEEEEEeCCe
Q 029615 114 TGHTHQFTAYKHEG-GVVINPGSATGAFSSITYDVNPSFVLMDIDGLR 160 (190)
Q Consensus 114 ~GH~H~~~~~~~~~-~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~~ 160 (190)
.||+|.-...+-+. +++|||||.+- .|++++.+++.
T Consensus 6 ~~~~~gm~~~Ms~klILviN~GSSS~-----------K~~lf~~~~~~ 42 (415)
T 3sk3_A 6 HHHHHGMASHMSSKLVLVLNCGSSSL-----------KFAIIDAVNGD 42 (415)
T ss_dssp ------------CCEEEEEEECSSCE-----------EEEEEETTTCC
T ss_pred ccccccccccCCCCeEEEEeCchHhh-----------hheeEECCCCC
Confidence 35555443333333 78999999884 68888866554
No 64
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=49.40 E-value=25 Score=26.35 Aligned_cols=34 Identities=9% Similarity=-0.051 Sum_probs=27.4
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecC
Q 029615 29 PGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
+.+||.||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (255)
T 3md9_A 57 AMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPG 90 (255)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCC
Confidence 5799999988765446788999999888988863
No 65
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=47.09 E-value=14 Score=30.10 Aligned_cols=42 Identities=12% Similarity=-0.046 Sum_probs=27.6
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCC
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGE 63 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
.+.+++++.+||.|+..||....-..-.-...+.|+..+.++
T Consensus 85 ~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag 126 (385)
T 4hwg_A 85 KVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG 126 (385)
T ss_dssp HHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC
Confidence 456667788999999999976522222223445678776654
No 66
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=46.61 E-value=29 Score=26.53 Aligned_cols=34 Identities=9% Similarity=-0.006 Sum_probs=27.1
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecC
Q 029615 29 PGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
+.+||.||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (283)
T 2r79_A 57 ALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSA 90 (283)
T ss_dssp TTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCC
T ss_pred hcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecC
Confidence 5799999987655557788999999888888754
No 67
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=42.36 E-value=31 Score=25.66 Aligned_cols=34 Identities=9% Similarity=-0.049 Sum_probs=26.0
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecC
Q 029615 29 PGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
+.+||.||....-...+.++.|++++.|++.+..
T Consensus 55 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 55 ALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp HTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 4689999986433456788999999878887753
No 68
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=36.22 E-value=69 Score=21.39 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=34.0
Q ss_pred HHHHhhhcCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEecCCcccc
Q 029615 21 AKFKSMLVPGKIQHIVCTGNLCIKEVHDYL----KIICPDLHIIRGEYDEE 67 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD~~ 67 (190)
....+.+++.+.-.||++.|....+....| ++.+.|++++.+.-+..
T Consensus 31 ~~v~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~LG 81 (113)
T 3jyw_G 31 NHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG 81 (113)
T ss_dssp HHHHHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTTTH
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 445666788999999999998665544433 34467999999886654
No 69
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=35.50 E-value=78 Score=19.50 Aligned_cols=44 Identities=7% Similarity=0.022 Sum_probs=31.2
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhh----hCCcEEEecCCccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKI----ICPDLHIIRGEYDE 66 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~----l~~~~~~v~GNHD~ 66 (190)
...+.+++.+.-.|+++.|.-. +....+.. .+.|++.++++-+.
T Consensus 18 ~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~sk~eL 65 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVESMKKL 65 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEESCHHHH
T ss_pred HHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 4555677889999999999655 45444433 35789999876543
No 70
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=34.79 E-value=56 Score=22.21 Aligned_cols=46 Identities=2% Similarity=-0.128 Sum_probs=31.8
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhh----hCCcEEEecCCcccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKI----ICPDLHIIRGEYDEE 67 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~----l~~~~~~v~GNHD~~ 67 (190)
...+.+++.+.-.||++.|.-..+....+.. .+.|++++.++-+..
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG 80 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASLG 80 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 3445556789999999999765444343433 357999998887764
No 71
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=33.09 E-value=49 Score=21.43 Aligned_cols=37 Identities=3% Similarity=-0.134 Sum_probs=19.4
Q ss_pred cCCCccEEEEcCCCCCHHHHHHHhhh--CCcEEEecCCcc
Q 029615 28 VPGKIQHIVCTGNLCIKEVHDYLKII--CPDLHIIRGEYD 65 (190)
Q Consensus 28 ~~~~~D~vi~~GDl~~~~~~~~l~~l--~~~~~~v~GNHD 65 (190)
.+..+|.|+ ..|.-..++++.|++. ..|++++.+..|
T Consensus 59 ~~~~~dlvi-~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 97 (137)
T 2pln_A 59 DIRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPT 97 (137)
T ss_dssp HHSCCSEEE-ECSTTHHHHHHHHHHHSTTSEEEEEESSCC
T ss_pred HcCCCCEEE-EcCccHHHHHHHHHhcCCCccEEEEeCCCC
Confidence 345677777 4443334455555544 345555555544
No 72
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=32.28 E-value=1.1e+02 Score=20.04 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=29.2
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEecCCccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKII----CPDLHIIRGEYDE 66 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v~GNHD~ 66 (190)
...+.+++.+.-.||++.|. ..+....|..+ ..|++.+.++-+.
T Consensus 28 ~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~~~sk~e 75 (110)
T 3cpq_A 28 RTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQHKITSLE 75 (110)
T ss_dssp HHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEECCSCHHH
T ss_pred HHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEEcCCHHH
Confidence 34455667889999999998 65555555433 4688877444443
No 73
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=31.98 E-value=92 Score=19.79 Aligned_cols=11 Identities=9% Similarity=0.126 Sum_probs=7.7
Q ss_pred CeEEEEEecCC
Q 029615 1 MVLVLALGDLH 11 (190)
Q Consensus 1 mmri~~iSD~H 11 (190)
||||+++.|--
T Consensus 1 ~~~ilivdd~~ 11 (134)
T 3f6c_A 1 SLNAIIIDDHP 11 (134)
T ss_dssp CEEEEEECCCH
T ss_pred CeEEEEEcCCH
Confidence 57888877654
No 74
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=31.17 E-value=82 Score=23.69 Aligned_cols=41 Identities=7% Similarity=-0.034 Sum_probs=28.5
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCC
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGE 63 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
+.+.+...++|.||+.+--.+.+.++.+.+.+.|++++-..
T Consensus 60 ~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~~~iPvV~i~~~ 100 (295)
T 3hcw_A 60 VYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKP 100 (295)
T ss_dssp HHHHHHTTCCSEEEESCCCTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHhCCcCEEEEcCcccChHHHHHHHhCCCCEEEECCC
Confidence 44445568999999987544556677777777788776443
No 75
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=30.85 E-value=56 Score=25.38 Aligned_cols=35 Identities=11% Similarity=-0.055 Sum_probs=27.9
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCCc
Q 029615 29 PGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEY 64 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNH 64 (190)
+.+||.||..+. ...+.++.|++++.|++.+..+.
T Consensus 82 ~l~PDlIi~~~~-~~~~~~~~L~~~Gipvv~~~~~~ 116 (326)
T 3psh_A 82 ALKPDVVFVTNY-APSEMIKQISDVNIPVVAISLRT 116 (326)
T ss_dssp HTCCSEEEEETT-CCHHHHHHHHTTTCCEEEECSCC
T ss_pred ccCCCEEEEeCC-CChHHHHHHHHcCCCEEEEeccc
Confidence 469999998754 45678899999988999987654
No 76
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=30.52 E-value=24 Score=29.41 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=18.4
Q ss_pred EecCeEEEccCCCcCCCCCCCCCCCCcEEEEEEeCC
Q 029615 124 KHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGL 159 (190)
Q Consensus 124 ~~~~~~~inpGs~~~~~~~~~~~~~~~y~ll~~~~~ 159 (190)
+...+++|||||.+- .|++++.+++
T Consensus 16 ~~~~ILviN~GSSS~-----------K~~lf~~~~~ 40 (415)
T 2e1z_A 16 EFPVVLVINCGSSSI-----------KFSVLDVATC 40 (415)
T ss_dssp -CCEEEEEEECSSEE-----------EEEEEETTTC
T ss_pred CCCeEEEEECCchhh-----------eEEEEECCCC
Confidence 345689999999884 7888886544
No 77
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.10 E-value=93 Score=19.83 Aligned_cols=45 Identities=18% Similarity=0.107 Sum_probs=29.3
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhh----hCCcEEEecCCcccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKI----ICPDLHIIRGEYDEE 67 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~----l~~~~~~v~GNHD~~ 67 (190)
...+.+++.+.-.||++.| ..++....+.. ...|++.+.++-+..
T Consensus 22 ~v~kai~~gka~lViiA~D-~~~~~~~~i~~~c~~~~ip~~~~~~s~~eL 70 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKN-APKEIKDDIYYYAKLSDIPVYEFEGTSVEL 70 (99)
T ss_dssp HHHHHHHHTCCSEEEEECC-CCHHHHHHHHHHHHHTTCCEEEECCCSCGG
T ss_pred HHHHHHHcCCccEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEeCCCHHHH
Confidence 3455566788999999999 56555555433 347887764554443
No 78
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=29.84 E-value=28 Score=25.45 Aligned_cols=34 Identities=12% Similarity=-0.041 Sum_probs=22.3
Q ss_pred eEEEEEecCCCCCCCCChHHHHHhhhcC--CCccEEEEcCC
Q 029615 2 VLVLALGDLHIPHRAADLPAKFKSMLVP--GKIQHIVCTGN 40 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~--~~~D~vi~~GD 40 (190)
|||++.||--+ ..+.+.+.+.|++ ... -|+-.|-
T Consensus 23 MkIaIgsDhaG----~~lK~~i~~~L~~~~~G~-eV~D~G~ 58 (179)
T 3k7p_A 23 RRVAIGTDHPA----FAIHENLILYVKEAGDEF-VPVYCGP 58 (179)
T ss_dssp EEEEEEECTGG----GGGHHHHHHHHHHTCTTE-EEEECSC
T ss_pred eEEEEEECchH----HHHHHHHHHHHHhcCCCC-eEEEcCC
Confidence 89999999664 2456667777754 444 4566663
No 79
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=29.78 E-value=16 Score=25.95 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=21.2
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcC
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTG 39 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~G 39 (190)
||||++-||--+ ..+.+.+.+.|++.+.+ |+-.|
T Consensus 7 ~mkI~igsDhaG----~~lK~~i~~~L~~~G~e-V~D~G 40 (148)
T 4em8_A 7 VKRVFLSSDHAG----VELRLFLSAYLRDLGCE-VFDCG 40 (148)
T ss_dssp CSEEEEEECGGG----HHHHHHHHHHHHHTTCE-EEECC
T ss_pred eeEEEEEECchh----HHHHHHHHHHHHHCCCE-EEEeC
Confidence 589999999654 14555666666544443 44555
No 80
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.59 E-value=83 Score=23.41 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=28.3
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCC
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGE 63 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
+.+.+...++|.||+.+--.+.+.++.+.+.+.|++++-..
T Consensus 61 ~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~~~ 101 (292)
T 3k4h_A 61 VVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKP 101 (292)
T ss_dssp HHHHHHTTCCCEEEESCCBTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHcCCCCEEEEeCCCCChHHHHHHHHCCCCEEEECCC
Confidence 34444568899999987544456677787777788777443
No 81
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=29.56 E-value=43 Score=26.52 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=46.6
Q ss_pred ccEEEEcCCCCC-HHHHHHHhhhCCcEEEecCCcccccCCCCceEEEECCEEEEEeecCccCCC------------CC--
Q 029615 32 IQHIVCTGNLCI-KEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPW------------GD-- 96 (190)
Q Consensus 32 ~D~vi~~GDl~~-~~~~~~l~~l~~~~~~v~GNHD~~~~~p~~~~~~~~~~~i~~~Hg~~~~~~------------~~-- 96 (190)
..-|+..|+++. +.+.+.|++.+ +.+|.. | .+|. +..-|+=+||-+.... .+
T Consensus 31 ~~~iy~~g~IVHN~~Vv~~L~~~G--v~~v~~--~---ev~~------g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP 97 (297)
T 3dnf_A 31 QGKVYTLGPIIHNPQEVNRLKNLG--VFPSQG--E---EFKE------GDTVIIRSHGIPPEKEEALRKKGLKVIDATCP 97 (297)
T ss_dssp CSCEEESSCSSSCHHHHHHHHHHT--EEECCS--S---CCCT------TCEEEECTTCCCHHHHHHHHHTTCEEEECCCH
T ss_pred CCCEEEeCCcccCHHHHHHHHhCC--CEEech--h---hCCC------CCEEEEECCCCCHHHHHHHHHCCCEEEeCCCc
Confidence 345999999998 78889999876 677754 3 3342 2234455677442110 00
Q ss_pred -HHHHHHH---hhcCCccEEEECcccCcce
Q 029615 97 -LDSLAML---QRQLDVDILVTGHTHQFTA 122 (190)
Q Consensus 97 -~~~l~~~---~~~~~~~~~i~GH~H~~~~ 122 (190)
....... ..+.+..+++.||.-.|..
T Consensus 98 ~V~Kvh~~v~~~~~~Gy~iiiiG~~~HpEV 127 (297)
T 3dnf_A 98 YVKAVHEAVCQLTREGYFVVLVGEKNHPEV 127 (297)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESCTTCHHH
T ss_pred chHHHHHHHHHHHhCCCEEEEEecCCCceE
Confidence 1111111 2245889999999887654
No 82
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=29.49 E-value=1.1e+02 Score=23.58 Aligned_cols=46 Identities=9% Similarity=0.121 Sum_probs=34.6
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEecCCcccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYL----KIICPDLHIIRGEYDEE 67 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD~~ 67 (190)
...+.+++.+.-+||+++|....+....| ++.+.|+++|.|.-+..
T Consensus 131 eVtKaIekgKAqLVVIA~DvdPielv~~LPaLCee~~VPY~~V~sK~~LG 180 (255)
T 4a17_F 131 HITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKGKAALG 180 (255)
T ss_dssp HHHHHHHTSCCSEEEEESCCSSTHHHHHHHHHHHHTTCCEEEESCHHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 45566678899999999998776655555 34468999999887764
No 83
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=29.26 E-value=60 Score=21.73 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=31.6
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHHh----hhCCcEEEecCCcccc
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYLK----IICPDLHIIRGEYDEE 67 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~----~l~~~~~~v~GNHD~~ 67 (190)
..+.+++.+.-.||++.|.-..+....|. +.+.|+++++++-+..
T Consensus 28 v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG 76 (121)
T 2lbw_A 28 VVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLG 76 (121)
T ss_dssp HHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHH
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHH
Confidence 44556678999999999987744444443 3457899998776654
No 84
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=28.45 E-value=1.3e+02 Score=22.90 Aligned_cols=46 Identities=7% Similarity=0.065 Sum_probs=31.5
Q ss_pred HHHHhhhcCCCccEEEEcCCC-CC-H---HHHHHHhhhCCcEEEecCCcccc
Q 029615 21 AKFKSMLVPGKIQHIVCTGNL-CI-K---EVHDYLKIICPDLHIIRGEYDEE 67 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl-~~-~---~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
+.+.++ .+.+.|.|++.|.. +. . ++++.+++...|++..+||.+.-
T Consensus 27 ~~l~~~-~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil~p~~~~~~ 77 (235)
T 3w01_A 27 DDLDAI-CMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIESV 77 (235)
T ss_dssp HHHHHH-HTSSCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEEECCCSTTC
T ss_pred HHHHHH-HHcCCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEEecCCHHHh
Confidence 444444 46889999999975 33 2 44555555446999999998654
No 85
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=28.40 E-value=36 Score=27.67 Aligned_cols=41 Identities=5% Similarity=-0.057 Sum_probs=25.5
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHH-HHHHHhhhCCcEEEecC
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKE-VHDYLKIICPDLHIIRG 62 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~-~~~~l~~l~~~~~~v~G 62 (190)
.+.+++++.+||.|++.||....- ....-+..+.|+..+.+
T Consensus 105 ~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~a 146 (403)
T 3ot5_A 105 GINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEA 146 (403)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC
Confidence 456666778999999999965421 11122334567766553
No 86
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=28.23 E-value=89 Score=23.57 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=28.6
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecCC
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGE 63 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
+.+.+...++|.||+.+--.+.+.++.+.+.+.|++.+-..
T Consensus 75 ~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 75 VKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCC
Confidence 44445568999999987544556677787777788776443
No 87
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.88 E-value=1.2e+02 Score=19.31 Aligned_cols=43 Identities=9% Similarity=0.053 Sum_probs=28.1
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEe-cCCcc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKII----CPDLHII-RGEYD 65 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v-~GNHD 65 (190)
...+.+++.+.-.|+++.| ...+....|..+ +.|++.+ ..+-+
T Consensus 23 ~v~kai~~gka~lViiA~D-~~~~~~~~l~~~c~~~~vp~~~~~~s~~e 70 (101)
T 1w41_A 23 KSIQYAKMGGAKLIIVARN-ARPDIKEDIEYYARLSGIPVYEFEGTSVE 70 (101)
T ss_dssp HHHHHHHHTCCSEEEEETT-SCHHHHHHHHHHHHHHTCCEEEESSCHHH
T ss_pred HHHHHHHcCCCcEEEEeCC-CCHHHHHHHHHHHHhcCCCEEEecCCHHH
Confidence 3445566788999999999 565555555433 5687775 44433
No 88
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=27.75 E-value=89 Score=17.78 Aligned_cols=10 Identities=20% Similarity=0.225 Sum_probs=8.5
Q ss_pred CeEEEEEecC
Q 029615 1 MVLVLALGDL 10 (190)
Q Consensus 1 mmri~~iSD~ 10 (190)
||+|-+.++.
T Consensus 1 m~~v~f~a~w 10 (77)
T 1ilo_A 1 MMKIQIYGTG 10 (77)
T ss_dssp CEEEEEECSS
T ss_pred CcEEEEEcCC
Confidence 8999999974
No 89
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=27.37 E-value=88 Score=24.15 Aligned_cols=38 Identities=13% Similarity=-0.046 Sum_probs=24.4
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcE--------------EEecCCcccc
Q 029615 30 GKIQHIVCTGNLCIKEVHDYLKIICPDL--------------HIIRGEYDEE 67 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~--------------~~v~GNHD~~ 67 (190)
..||.|+++.=..+.-++..-.+++.|+ |.+|||-|..
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~dp~~VdypIP~NDds~ 208 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAI 208 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSCGGGCSEECCSCSSCH
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCCchhcceEeecCCchH
Confidence 5899999987555543444444455444 6778887665
No 90
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=27.28 E-value=73 Score=23.83 Aligned_cols=39 Identities=5% Similarity=-0.033 Sum_probs=26.2
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
+.+.+.+.++|.||+.+--.+.+.++.+.+.+.|++++-
T Consensus 58 ~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 58 IRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHG 96 (288)
T ss_dssp HHHHHHHTCCSEEEEESCCTTCHHHHHHHHTTCCEEEES
T ss_pred HHHHHHcCCccEEEEecCCCCcHHHHHHhhCCCCEEEEC
Confidence 444444578999998875444566777777777777653
No 91
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=27.07 E-value=44 Score=21.86 Aligned_cols=48 Identities=8% Similarity=0.002 Sum_probs=29.4
Q ss_pred hHHHHHhhhcCCCccEEEEcCCCCC--HHHHHHHhhh--CCcEEEecCCccc
Q 029615 19 LPAKFKSMLVPGKIQHIVCTGNLCI--KEVHDYLKII--CPDLHIIRGEYDE 66 (190)
Q Consensus 19 ~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
..+.|.+++++.++..|+++-++.+ ++.++...+- .+-++.+|+++-.
T Consensus 41 ~~~~~~~l~~~~digIIlIte~ia~~i~~~i~~~~~~~~~P~IieIPs~~g~ 92 (102)
T 2i4r_A 41 IVKAVEDVLKRDDVGVVIMKQEYLKKLPPVLRREIDEKVEPTFVSVGGTGGV 92 (102)
T ss_dssp HHHHHHHHHHCSSEEEEEEEGGGSTTSCHHHHTTTTTCCSSEEEEEC-----
T ss_pred HHHHHHHHhhCCCeEEEEEeHHHHHHHHHHHHHHHhCCCccEEEEECCCCCC
Confidence 4456777777779999999999988 4555544442 2335668887643
No 92
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=26.58 E-value=12 Score=26.95 Aligned_cols=34 Identities=15% Similarity=-0.023 Sum_probs=22.4
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHhhhcCCCccEEEEcC
Q 029615 1 MVLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTG 39 (190)
Q Consensus 1 mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~G 39 (190)
||||++.||--+ ..+.+.+.+.+++.+. -|+-.|
T Consensus 3 ~MkIaigsDhaG----~~lK~~i~~~L~~~G~-eV~D~G 36 (162)
T 2vvp_A 3 GMRVYLGADHAG----YELKQRIIEHLKQTGH-EPIDCG 36 (162)
T ss_dssp CCEEEEEECHHH----HHHHHHHHHHHHHTTC-EEEECS
T ss_pred CCEEEEEeCchh----HHHHHHHHHHHHHCCC-EEEEeC
Confidence 589999999653 1455567777755555 555666
No 93
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=26.52 E-value=40 Score=27.24 Aligned_cols=41 Identities=5% Similarity=0.007 Sum_probs=25.7
Q ss_pred HHHhhhcCCCccEEEEcCCCCCH-HHHHHHhhhCCcEEEecC
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIK-EVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~-~~~~~l~~l~~~~~~v~G 62 (190)
.+.+++++.+||.|+..||.... ......+..+.|+..+.+
T Consensus 102 ~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a 143 (396)
T 3dzc_A 102 GMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA 143 (396)
T ss_dssp HHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC
T ss_pred HHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC
Confidence 45566677899999999997652 111222334567766543
No 94
>2kqs_B Death domain-associated protein 6; SUMO, SIM, DAXX, nucleus, phosphoprotein, UBL conjugation PA apoptosis, transcription, transcription regulation; NMR {Homo sapiens}
Probab=26.05 E-value=27 Score=16.89 Aligned_cols=11 Identities=18% Similarity=0.229 Sum_probs=9.1
Q ss_pred eEEEEEecCCC
Q 029615 2 VLVLALGDLHI 12 (190)
Q Consensus 2 mri~~iSD~H~ 12 (190)
.+++++||+|.
T Consensus 13 ~evivlsds~~ 23 (26)
T 2kqs_B 13 EEIIVLSDSDX 23 (26)
T ss_pred ceEEEcccccc
Confidence 36889999996
No 95
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=25.39 E-value=1.1e+02 Score=23.08 Aligned_cols=27 Identities=0% Similarity=-0.273 Sum_probs=15.6
Q ss_pred CccEEEEcCCCCCHHHHHHHhhhCCcE
Q 029615 31 KIQHIVCTGNLCIKEVHDYLKIICPDL 57 (190)
Q Consensus 31 ~~D~vi~~GDl~~~~~~~~l~~l~~~~ 57 (190)
.||.|+++.=..+.-++..-.+++.|+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPv 183 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPT 183 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCE
Confidence 699999885444433344444455444
No 96
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=25.19 E-value=1.4e+02 Score=23.07 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=34.3
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEecCCcccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKII----CPDLHIIRGEYDEE 67 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
...+++++.....|+++.|.-..|....|..+ +.|+.+|+|--+..
T Consensus 134 eVTklVE~kKAqLVVIA~DVdPiElV~fLPaLC~k~gVPY~iVk~KarLG 183 (258)
T 3iz5_H 134 HVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183 (258)
T ss_dssp HHHHHHHTTCEEEEEEESCCSSTHHHHHHHHHHTTTTCCEEEESCHHHHH
T ss_pred HHHHHHHcCcceEEEEeCCCChHHHHhHHHHHHHhcCCCeEEECCHHHHH
Confidence 35556678899999999997766666665544 57899999876653
No 97
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.97 E-value=1.2e+02 Score=22.30 Aligned_cols=38 Identities=0% Similarity=-0.135 Sum_probs=26.8
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
+.+.+...++|.||+.+--. .+.++.+.+.+.|++.+-
T Consensus 55 ~~~~l~~~~vdgiIi~~~~~-~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 55 LLRAIGSRGFDGLILQSFSN-PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHTTTCSEEEEESSCC-HHHHHHHHTTSSCEEEES
T ss_pred HHHHHHhCCCCEEEEecCCc-HHHHHHHHHCCCCEEEEe
Confidence 33334467899999988655 666777777777887763
No 98
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=24.46 E-value=1.7e+02 Score=21.97 Aligned_cols=39 Identities=5% Similarity=0.074 Sum_probs=26.8
Q ss_pred HHhhhcCCCccEEEEcCCCCCHH-HHHHHhhhCCcEEEecC
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKE-VHDYLKIICPDLHIIRG 62 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~-~~~~l~~l~~~~~~v~G 62 (190)
+.+.+...++|.||+.+--.+.+ .++.+.+ +.|++++-.
T Consensus 63 ~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~ 102 (303)
T 3kke_A 63 LSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINS 102 (303)
T ss_dssp HHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESC
T ss_pred HHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECC
Confidence 44444568999999988544444 6777777 778877643
No 99
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=24.46 E-value=90 Score=23.45 Aligned_cols=41 Identities=5% Similarity=0.022 Sum_probs=28.2
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecC
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
.+.+.+...++|.||+.+--.+.+.++.+.+.+.|++.+-.
T Consensus 56 ~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~~~ 96 (294)
T 3qk7_A 56 SLIHLVETRRVDALIVAHTQPEDFRLQYLQKQNFPFLALGR 96 (294)
T ss_dssp HHHHHHHHTCCSEEEECSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHcCCCCEEEEeCCCCChHHHHHHHhCCCCEEEECC
Confidence 34454555789999998865555667777777777776643
No 100
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=24.19 E-value=78 Score=21.11 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=30.1
Q ss_pred HhhhcCCCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEecCCcccc
Q 029615 24 KSMLVPGKIQHIVCTGNLCI-----KEVHDYLKIICPDLHIIRGEYDEE 67 (190)
Q Consensus 24 ~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
.+.+++..||.|+. |+.- .++++.+++...|++++.|+-|..
T Consensus 46 l~~~~~~~~Dlvll--Di~mP~~~G~el~~~lr~~~ipvI~lTa~~~~~ 92 (123)
T 2lpm_A 46 LDIARKGQFDIAII--DVNLDGEPSYPVADILAERNVPFIFATGYGSKG 92 (123)
T ss_dssp HHHHHHCCSSEEEE--CSSSSSCCSHHHHHHHHHTCCSSCCBCTTCTTS
T ss_pred HHHHHhCCCCEEEE--ecCCCCCCHHHHHHHHHcCCCCEEEEecCccHH
Confidence 33445678999988 4432 577788887777899999986653
No 101
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=24.14 E-value=87 Score=24.25 Aligned_cols=41 Identities=7% Similarity=0.092 Sum_probs=26.7
Q ss_pred HHHhhhcC-CCccEEEEcCCCCC-HHHHHHHhhhCCcEEEecC
Q 029615 22 KFKSMLVP-GKIQHIVCTGNLCI-KEVHDYLKIICPDLHIIRG 62 (190)
Q Consensus 22 ~l~~~~~~-~~~D~vi~~GDl~~-~~~~~~l~~l~~~~~~v~G 62 (190)
.+..++.+ .++|.|++.++-.. .+.++.+.+.+.|++++-.
T Consensus 52 ~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 52 QARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEES
T ss_pred HHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcC
Confidence 45555554 79999999985322 4556666666677776543
No 102
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.60 E-value=58 Score=25.52 Aligned_cols=31 Identities=10% Similarity=0.119 Sum_probs=24.8
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029615 29 PGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
+.+||.||..+. ..+.++.|++++.|++.+.
T Consensus 114 al~PDLIi~~~~--~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 114 AATPDVVFLPMK--LKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp HTCCSEEEEEGG--GHHHHHHHHHTTCCEEEEC
T ss_pred hcCCCEEEEeCc--chhHHHHHHHcCCCEEEEc
Confidence 469999998764 4677889999888888885
No 103
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=23.49 E-value=40 Score=24.78 Aligned_cols=21 Identities=10% Similarity=-0.070 Sum_probs=16.4
Q ss_pred HHHHHhhhcCCCccEEEEcCC
Q 029615 20 PAKFKSMLVPGKIQHIVCTGN 40 (190)
Q Consensus 20 ~~~l~~~~~~~~~D~vi~~GD 40 (190)
.+.+.+++++.+||.|+|+|=
T Consensus 46 ~~~l~~~~~~~~pd~vi~~G~ 66 (192)
T 2ebj_A 46 LGEALEDLHREGPKAVLHLGL 66 (192)
T ss_dssp HHHHHHHHHTTCCSEEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecc
Confidence 345667777789999999993
No 104
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=23.48 E-value=1.6e+02 Score=19.20 Aligned_cols=41 Identities=7% Similarity=0.113 Sum_probs=22.0
Q ss_pred hhcCCCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEecCCccc
Q 029615 26 MLVPGKIQHIVCTGNLCI---KEVHDYLKIIC--PDLHIIRGEYDE 66 (190)
Q Consensus 26 ~~~~~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD~ 66 (190)
.+.+..+|.|++-=++-+ .++++.+++.. .|++++.++.+.
T Consensus 61 ~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 106 (150)
T 4e7p_A 61 LLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRA 106 (150)
T ss_dssp HHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCH
T ss_pred HhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCH
Confidence 344566777777555544 34445555432 355666655443
No 105
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=23.37 E-value=32 Score=27.54 Aligned_cols=12 Identities=8% Similarity=-0.114 Sum_probs=10.1
Q ss_pred CeEEEEEecCCC
Q 029615 1 MVLVLALGDLHI 12 (190)
Q Consensus 1 mmri~~iSD~H~ 12 (190)
||||+++++...
T Consensus 20 mmkIl~i~~~~~ 31 (438)
T 3c48_A 20 HMRVAMISMHTS 31 (438)
T ss_dssp CCEEEEECTTSC
T ss_pred hheeeeEEeecc
Confidence 899999997553
No 106
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=23.09 E-value=1.1e+02 Score=19.55 Aligned_cols=38 Identities=16% Similarity=0.006 Sum_probs=20.9
Q ss_pred cCCCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEecCCcc
Q 029615 28 VPGKIQHIVCTGNLCI---KEVHDYLKIIC--PDLHIIRGEYD 65 (190)
Q Consensus 28 ~~~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD 65 (190)
++.++|.|++--++-+ .+.++.+++.. .|++++.+..+
T Consensus 48 ~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 90 (137)
T 3hdg_A 48 GLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSE 90 (137)
T ss_dssp HHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCC
T ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcC
Confidence 3456777777655544 34455555443 35555555544
No 107
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=23.05 E-value=1.5e+02 Score=19.49 Aligned_cols=45 Identities=11% Similarity=0.012 Sum_probs=30.3
Q ss_pred HHHhhhcCCCccEEEEcCCCCCHHHHHHHh---h-hCCcEEEecCCcccc
Q 029615 22 KFKSMLVPGKIQHIVCTGNLCIKEVHDYLK---I-ICPDLHIIRGEYDEE 67 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~---~-l~~~~~~v~GNHD~~ 67 (190)
...+.+++.+.-.||++.|.-. .....+. . ...|++.+.|+-+..
T Consensus 33 ~t~kai~~gkakLVilA~D~~~-~~~~~i~~~c~~~~ipv~~~~~s~~eL 81 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANNCPP-LRKSEIETYAMLAKISVHHFHGNNVDL 81 (112)
T ss_dssp HHHHHHHTTCCSEEEECSCCCH-HHHHHHHHHHHHTTCCEECCCCTTCTH
T ss_pred HHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCcEEEeCCCHHHH
Confidence 3445566789999999999754 3333332 2 347888887777665
No 108
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=22.53 E-value=1.3e+02 Score=24.12 Aligned_cols=33 Identities=12% Similarity=-0.124 Sum_probs=19.4
Q ss_pred CCccEEEEcC-CCCCHH-HHHHHhhhCCcEEEecC
Q 029615 30 GKIQHIVCTG-NLCIKE-VHDYLKIICPDLHIIRG 62 (190)
Q Consensus 30 ~~~D~vi~~G-Dl~~~~-~~~~l~~l~~~~~~v~G 62 (190)
.+.|.|+..+ +-++.+ +++.+.+.+-+++...|
T Consensus 44 ~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~ 78 (343)
T 2yq5_A 44 EGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRI 78 (343)
T ss_dssp TTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESS
T ss_pred cCCcEEEEcCCCCcCHHHHHHhccccCceEEEECc
Confidence 4677777764 456667 77777653334555444
No 109
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.51 E-value=1.5e+02 Score=18.62 Aligned_cols=41 Identities=5% Similarity=-0.057 Sum_probs=25.5
Q ss_pred hhcCCCccEEEEcCCCCC---HHHHHHHhhh----CCcEEEecCCccc
Q 029615 26 MLVPGKIQHIVCTGNLCI---KEVHDYLKII----CPDLHIIRGEYDE 66 (190)
Q Consensus 26 ~~~~~~~D~vi~~GDl~~---~~~~~~l~~l----~~~~~~v~GNHD~ 66 (190)
.+.+.++|.|++-=++-+ .++++.+++. ..|++++.+..+.
T Consensus 42 ~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~ 89 (133)
T 3nhm_A 42 QALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPR 89 (133)
T ss_dssp HHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-
T ss_pred HHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcH
Confidence 344567898888655544 4556666654 2477777776554
No 110
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=22.40 E-value=1.5e+02 Score=18.58 Aligned_cols=41 Identities=7% Similarity=0.041 Sum_probs=21.9
Q ss_pred hhcCCCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEecCCccc
Q 029615 26 MLVPGKIQHIVCTGNLCI---KEVHDYLKIIC--PDLHIIRGEYDE 66 (190)
Q Consensus 26 ~~~~~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD~ 66 (190)
.+.+.++|.|++-=++-+ .++++.+++.. .|++++.+..+.
T Consensus 46 ~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~ 91 (130)
T 3eod_A 46 LLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENM 91 (130)
T ss_dssp HHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCH
T ss_pred HHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCH
Confidence 345567887777544433 34555555543 466666665544
No 111
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=22.17 E-value=1.4e+02 Score=21.86 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=24.7
Q ss_pred hcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029615 27 LVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61 (190)
Q Consensus 27 ~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
+...++|.|++.+--.+.+.++.+++.+.|++++-
T Consensus 55 l~~~~vdgii~~~~~~~~~~~~~l~~~~iPvV~~~ 89 (275)
T 3d8u_A 55 FLESRPAGVVLFGSEHSQRTHQLLEASNTPVLEIA 89 (275)
T ss_dssp HHTSCCCCEEEESSCCCHHHHHHHHHHTCCEEEES
T ss_pred HHhcCCCEEEEeCCCCCHHHHHHHHhCCCCEEEEe
Confidence 34678999888875445566777777777887763
No 112
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=21.73 E-value=1e+02 Score=23.90 Aligned_cols=34 Identities=18% Similarity=0.031 Sum_probs=25.8
Q ss_pred CCCccEEEEcCCCCC--HHHHHHHhhhCCcEEEecCC
Q 029615 29 PGKIQHIVCTGNLCI--KEVHDYLKIICPDLHIIRGE 63 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~--~~~~~~l~~l~~~~~~v~GN 63 (190)
+.+||.||..+...+ .+.++.|++++ |++.+..+
T Consensus 113 ~l~PDLIi~~~~~~~~~~~~~~~L~~~g-pvv~~~~~ 148 (326)
T 3tlk_A 113 AQMPDLILISATGGDSALALYDQLSTIA-PTLIINYD 148 (326)
T ss_dssp TTCCSEEEEESSSTTCCGGGHHHHHTTS-CEEEECCS
T ss_pred hCCCCEEEEeCCCccchHHHHHHHHhhC-CEEEEcCC
Confidence 579999998765433 46788999988 88887654
No 113
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=21.71 E-value=2.2e+02 Score=20.06 Aligned_cols=37 Identities=14% Similarity=-0.023 Sum_probs=21.8
Q ss_pred CCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEecCCccc
Q 029615 30 GKIQHIVCTGNLCI---KEVHDYLKIIC--PDLHIIRGEYDE 66 (190)
Q Consensus 30 ~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD~ 66 (190)
..||.|++-=++-+ .++++.+++.. .|++++.+..|.
T Consensus 42 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~ 83 (220)
T 1p2f_A 42 EAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDD 83 (220)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCH
Confidence 46777776444433 35556666542 467777776654
No 114
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=21.52 E-value=1.7e+02 Score=22.06 Aligned_cols=40 Identities=3% Similarity=-0.012 Sum_probs=28.4
Q ss_pred cCCCccEEEEcCCC-CC-H---HHHHHHhhhCCcEEEecCCcccc
Q 029615 28 VPGKIQHIVCTGNL-CI-K---EVHDYLKIICPDLHIIRGEYDEE 67 (190)
Q Consensus 28 ~~~~~D~vi~~GDl-~~-~---~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
.+.+.|+|++.|=. +. . ++++.+++...|++.-+||.+.-
T Consensus 28 ~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~~v 72 (228)
T 3vzx_A 28 CESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAI 72 (228)
T ss_dssp HTSSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEECSCGGGC
T ss_pred HHcCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEeCCCHHHc
Confidence 46789999999954 32 3 34445555456999999998664
No 115
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=21.51 E-value=38 Score=22.21 Aligned_cols=30 Identities=13% Similarity=0.017 Sum_probs=16.9
Q ss_pred HHhhcCCccEEEECcccCcceEEe--cCeEEE
Q 029615 102 MLQRQLDVDILVTGHTHQFTAYKH--EGGVVI 131 (190)
Q Consensus 102 ~~~~~~~~~~~i~GH~H~~~~~~~--~~~~~i 131 (190)
.++...+++++++|..-......+ .|+.++
T Consensus 56 ~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~ 87 (116)
T 1rdu_A 56 QSLVSKGVEYLIASNVGRNAFETLKAAGVKVY 87 (116)
T ss_dssp HHHHTTTCCEEECSSCCSSCHHHHHTTTCEEE
T ss_pred HHHHHcCCCEEEECCCCHhHHHHHHHCCCEEE
Confidence 344456788888887765443322 345444
No 116
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=21.42 E-value=34 Score=25.68 Aligned_cols=20 Identities=10% Similarity=0.247 Sum_probs=15.7
Q ss_pred HHHHhhhcCCCccEEEEcCC
Q 029615 21 AKFKSMLVPGKIQHIVCTGN 40 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GD 40 (190)
+.+.+++++.+||+|||+|=
T Consensus 52 ~~l~~~i~~~~Pd~Vi~vG~ 71 (215)
T 3giu_A 52 NIINKTLASNHYDVVLAIGQ 71 (215)
T ss_dssp HHHHHHHHHSCCSEEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEecc
Confidence 45666667789999999994
No 117
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=20.91 E-value=1.2e+02 Score=23.55 Aligned_cols=41 Identities=7% Similarity=-0.060 Sum_probs=28.9
Q ss_pred HHHHhhhcCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029615 21 AKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIR 61 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
..+.+.+...++|.||+++--.+.+.++.+.+.+.|++++-
T Consensus 118 ~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~i~ 158 (366)
T 3h5t_A 118 VSAQQLVNNAAVDGVVIYSVAKGDPHIDAIRARGLPAVIAD 158 (366)
T ss_dssp HHHHHHHHTCCCSCEEEESCCTTCHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHhCCCCEEEEecCCCChHHHHHHHHCCCCEEEEC
Confidence 34455555789999999886444566777777777888763
No 118
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=20.88 E-value=58 Score=22.76 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=29.5
Q ss_pred HhhhcCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEecCCcccc
Q 029615 24 KSMLVPGKIQHIVCTGNLCIKEVHDYLKII----CPDLHIIRGEYDEE 67 (190)
Q Consensus 24 ~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
.+.+++.+.-.||+++|.-..++...|..+ +.|++++.++-+..
T Consensus 59 ~KaI~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v~sk~eLG 106 (144)
T 2jnb_A 59 TKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 106 (144)
T ss_dssp HHHHHHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEESCSHHHH
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 334456788999999997665555555433 46888888776554
No 119
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=20.85 E-value=1.6e+02 Score=20.89 Aligned_cols=42 Identities=2% Similarity=-0.077 Sum_probs=26.0
Q ss_pred HhhhcCCCccEEEEcCCCCCHHHHHHHhhh--CCcEEEecCCccc
Q 029615 24 KSMLVPGKIQHIVCTGNLCIKEVHDYLKII--CPDLHIIRGEYDE 66 (190)
Q Consensus 24 ~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
.+.+.+..||.|+ +.|.-..++++.+++. ..|++++.+..|.
T Consensus 37 l~~l~~~~~dlvi-lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~ 80 (223)
T 2hqr_A 37 EYLMDIRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPTS 80 (223)
T ss_dssp HHHHTTSCCSEEE-ECCTTHHHHHHHHHHHCTTSEEEEEESSCCH
T ss_pred HHHHhcCCCCEEE-eCCCCHHHHHHHHHhCCCCCcEEEEECCCCH
Confidence 3344566789888 6654445666666654 3467777766554
No 120
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.56 E-value=36 Score=26.29 Aligned_cols=64 Identities=11% Similarity=-0.022 Sum_probs=34.4
Q ss_pred CeEEEEEecC--------C---CCCCCCC---hHHHHHhhhcCCCccEEEEcCCCCC--------------HHHHHHHhh
Q 029615 1 MVLVLALGDL--------H---IPHRAAD---LPAKFKSMLVPGKIQHIVCTGNLCI--------------KEVHDYLKI 52 (190)
Q Consensus 1 mmri~~iSD~--------H---~~~~~~~---~~~~l~~~~~~~~~D~vi~~GDl~~--------------~~~~~~l~~ 52 (190)
||||++++.. - .+..... ....+.+.+.+.+.+..+++.+-.. ....+.+++
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 82 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRT 82 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTTEEECSCCSHHHHHHHHHH
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCcceeccCCcHHHHHHHHHh
Confidence 5999999997 1 1111011 1223444455566777777655322 134455665
Q ss_pred hCCcEEEecCCc
Q 029615 53 ICPDLHIIRGEY 64 (190)
Q Consensus 53 l~~~~~~v~GNH 64 (190)
....++.+.+..
T Consensus 83 ~~~Dvi~~~~~~ 94 (342)
T 2iuy_A 83 ADVDVVHDHSGG 94 (342)
T ss_dssp CCCSEEEECSSS
T ss_pred cCCCEEEECCch
Confidence 555666665554
No 121
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=20.55 E-value=1.4e+02 Score=20.42 Aligned_cols=45 Identities=11% Similarity=-0.046 Sum_probs=30.4
Q ss_pred HHhhhcCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEecCCcccc
Q 029615 23 FKSMLVPGKIQHIVCTGNLCIKEVHDYL----KIICPDLHIIRGEYDEE 67 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD~~ 67 (190)
..+.+++.+.-.||+++|.-..++...| ++.+.|++++.++-+..
T Consensus 40 v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG 88 (134)
T 2ale_A 40 ATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALG 88 (134)
T ss_dssp HHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 3444566889999999998764433333 34468888887776554
Done!