Query 029616
Match_columns 190
No_of_seqs 104 out of 176
Neff 3.4
Searched_HMMs 29240
Date Tue Mar 26 02:09:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9y_A CG14216, LD40846P; phos 100.0 3E-101 1E-105 646.9 16.3 175 2-178 9-187 (198)
2 4h3k_B RNA polymerase II subun 100.0 4E-100 1E-104 646.0 17.2 175 2-178 25-203 (214)
3 4etn_A LMPTP, low molecular we 96.6 0.0018 6E-08 52.7 4.2 108 2-144 34-154 (184)
4 4egs_A Ribose 5-phosphate isom 96.6 0.0061 2.1E-07 49.0 7.1 37 2-38 34-76 (180)
5 1d1q_A Tyrosine phosphatase (E 96.4 0.0056 1.9E-07 47.9 5.7 111 2-145 7-136 (161)
6 2wmy_A WZB, putative acid phos 96.1 0.0073 2.5E-07 46.8 5.2 109 3-145 9-124 (150)
7 3rof_A Low molecular weight pr 95.9 0.016 5.4E-07 45.9 6.3 108 3-145 7-128 (158)
8 2fek_A Low molecular weight pr 95.8 0.01 3.5E-07 47.3 4.7 109 3-145 23-138 (167)
9 2wja_A Putative acid phosphata 95.5 0.014 4.7E-07 46.6 4.5 108 3-145 27-142 (168)
10 1y1l_A Arsenate reductase (ARS 95.1 0.025 8.5E-07 42.4 4.6 99 4-145 1-101 (124)
11 1p8a_A Protein tyrosine phosph 94.5 0.022 7.6E-07 43.7 3.0 113 1-145 3-120 (146)
12 1jf8_A Arsenate reductase; ptp 94.5 0.023 7.7E-07 43.1 3.0 37 2-38 3-42 (131)
13 1u2p_A Ptpase, low molecular w 94.4 0.035 1.2E-06 43.3 3.9 89 2-121 4-100 (163)
14 2gi4_A Possible phosphotyrosin 94.1 0.056 1.9E-06 42.2 4.6 90 3-122 2-100 (156)
15 3rh0_A Arsenate reductase; oxi 94.1 0.049 1.7E-06 42.7 4.2 102 3-145 21-125 (148)
16 1jl3_A Arsenate reductase; alp 94.1 0.031 1.1E-06 42.4 3.0 36 2-37 3-41 (139)
17 2l17_A Synarsc, arsenate reduc 93.8 0.037 1.3E-06 42.0 2.9 33 4-36 6-41 (134)
18 3n8i_A Low molecular weight ph 93.5 0.038 1.3E-06 43.4 2.7 113 2-145 5-132 (157)
19 4etm_A LMPTP, low molecular we 93.4 0.044 1.5E-06 43.8 2.8 89 3-121 19-116 (173)
20 3t38_A Arsenate reductase; low 93.1 0.065 2.2E-06 44.6 3.5 41 2-47 81-124 (213)
21 2cwd_A Low molecular weight ph 92.9 0.068 2.3E-06 41.8 3.2 110 2-145 4-126 (161)
22 3jvi_A Protein tyrosine phosph 92.3 0.062 2.1E-06 42.2 2.3 90 3-122 5-102 (161)
23 3iwh_A Rhodanese-like domain p 87.1 0.43 1.5E-05 34.4 3.0 30 3-33 57-86 (103)
24 2jtq_A Phage shock protein E; 87.0 0.61 2.1E-05 31.4 3.6 31 3-34 42-73 (85)
25 3foj_A Uncharacterized protein 86.3 0.42 1.4E-05 33.3 2.5 31 3-34 57-87 (100)
26 3gk5_A Uncharacterized rhodane 85.8 0.47 1.6E-05 33.7 2.6 31 3-34 56-86 (108)
27 3g5j_A Putative ATP/GTP bindin 85.6 0.53 1.8E-05 33.4 2.8 33 3-35 90-122 (134)
28 1vee_A Proline-rich protein fa 84.8 0.73 2.5E-05 33.9 3.3 32 4-36 76-108 (134)
29 3nhv_A BH2092 protein; alpha-b 84.1 0.74 2.5E-05 34.6 3.1 32 3-34 73-105 (144)
30 3eme_A Rhodanese-like domain p 83.8 0.79 2.7E-05 31.9 3.0 31 3-34 57-87 (103)
31 2fsx_A RV0390, COG0607: rhodan 80.8 1.9 6.4E-05 32.0 4.3 32 4-36 82-114 (148)
32 1qxn_A SUD, sulfide dehydrogen 79.5 1.8 6E-05 32.1 3.7 31 3-34 83-114 (137)
33 1wv9_A Rhodanese homolog TT165 78.2 1.3 4.4E-05 30.4 2.4 30 4-34 55-84 (94)
34 3d1p_A Putative thiosulfate su 77.0 1.5 5.1E-05 32.0 2.7 31 3-34 92-123 (139)
35 1gmx_A GLPE protein; transfera 76.0 1.8 6E-05 30.3 2.7 31 3-34 59-90 (108)
36 1tq1_A AT5G66040, senescence-a 73.1 2.1 7.1E-05 31.2 2.5 33 3-36 83-116 (129)
37 3hix_A ALR3790 protein; rhodan 70.5 2.1 7.1E-05 30.1 2.0 29 4-33 54-83 (106)
38 2hhg_A Hypothetical protein RP 69.9 2.5 8.5E-05 30.6 2.3 31 3-34 87-118 (139)
39 3flh_A Uncharacterized protein 66.0 4.4 0.00015 29.2 3.0 30 4-34 73-104 (124)
40 3ilm_A ALR3790 protein; rhodan 63.7 3.6 0.00012 30.7 2.2 29 4-33 58-87 (141)
41 1rcu_A Conserved hypothetical 62.8 7.8 0.00027 31.6 4.2 30 4-34 25-64 (195)
42 2fb7_A SM-like protein, LSM-14 60.3 4.2 0.00015 30.7 2.0 41 6-54 34-74 (95)
43 2k0z_A Uncharacterized protein 55.5 9.8 0.00034 26.7 3.2 30 3-33 57-86 (110)
44 4gnr_A ABC transporter substra 52.3 30 0.001 27.7 6.0 42 113-154 29-70 (353)
45 3tg1_B Dual specificity protei 51.8 11 0.00039 28.1 3.2 31 3-33 94-132 (158)
46 2vxe_A CG10686-PA; EDC3, CAR-1 49.3 8.2 0.00028 28.7 2.0 41 6-54 28-68 (88)
47 1t3k_A Arath CDC25, dual-speci 48.9 16 0.00055 27.4 3.7 33 4-36 87-128 (152)
48 1e0c_A Rhodanese, sulfurtransf 45.1 15 0.0005 29.4 3.1 31 4-34 83-114 (271)
49 1c25_A CDC25A; hydrolase, cell 45.1 15 0.0005 27.2 2.9 23 4-26 89-113 (161)
50 2a2k_A M-phase inducer phospha 44.3 15 0.00053 27.6 2.9 31 4-34 91-134 (175)
51 4gpa_A Glutamate receptor 4; P 39.8 29 0.00098 27.8 4.0 47 112-158 20-66 (389)
52 2fsu_A Protein PHNH; C-P lyase 38.8 21 0.00072 29.9 3.1 26 29-54 142-167 (210)
53 3aay_A Putative thiosulfate su 38.1 18 0.00061 29.0 2.5 33 4-36 79-112 (277)
54 1whz_A Hypothetical protein; a 37.3 18 0.00062 24.1 2.1 25 16-41 7-31 (70)
55 3sbx_A Putative uncharacterize 35.7 36 0.0012 27.5 4.0 32 2-33 13-50 (189)
56 1wek_A Hypothetical protein TT 35.2 31 0.001 28.3 3.5 32 3-34 38-76 (217)
57 1yt8_A Thiosulfate sulfurtrans 34.7 32 0.0011 30.9 3.9 63 3-68 323-391 (539)
58 2j6p_A SB(V)-AS(V) reductase; 33.4 29 0.00099 25.8 2.9 29 5-33 70-106 (152)
59 3qua_A Putative uncharacterize 33.1 41 0.0014 27.4 3.9 31 3-33 23-59 (199)
60 1weh_A Conserved hypothetical 32.2 34 0.0012 26.8 3.2 31 4-34 3-40 (171)
61 2l2q_A PTS system, cellobiose- 32.0 59 0.002 23.2 4.3 34 3-36 5-43 (109)
62 2ko6_A Uncharacterized protein 31.8 29 0.001 25.9 2.6 25 154-178 25-57 (89)
63 1t35_A Hypothetical protein YV 31.6 45 0.0015 26.6 3.9 31 4-34 3-40 (191)
64 3i2v_A Adenylyltransferase and 30.7 25 0.00086 24.4 2.0 29 4-33 74-109 (127)
65 3lop_A Substrate binding perip 30.7 94 0.0032 24.8 5.7 41 113-153 27-67 (364)
66 2eg4_A Probable thiosulfate su 30.1 33 0.0011 26.8 2.8 32 4-36 63-95 (230)
67 3lkb_A Probable branched-chain 29.9 84 0.0029 25.4 5.3 40 113-152 29-68 (392)
68 4f67_A UPF0176 protein LPG2838 29.2 26 0.00089 29.5 2.2 30 3-33 182-212 (265)
69 3ipc_A ABC transporter, substr 29.1 1.1E+02 0.0037 24.3 5.7 43 113-155 24-66 (356)
70 3i45_A Twin-arginine transloca 29.0 1E+02 0.0035 24.9 5.7 42 112-153 25-67 (387)
71 3h5l_A Putative branched-chain 28.0 1.1E+02 0.0038 25.1 5.8 42 112-153 35-77 (419)
72 1urh_A 3-mercaptopyruvate sulf 27.8 56 0.0019 26.1 3.8 29 4-33 88-118 (280)
73 2ouc_A Dual specificity protei 27.4 48 0.0016 23.1 3.1 29 4-33 85-122 (142)
74 2iz6_A Molybdenum cofactor car 26.9 34 0.0012 27.2 2.4 34 2-35 13-53 (176)
75 2wlr_A Putative thiosulfate su 26.0 42 0.0014 29.0 3.0 33 3-36 359-392 (423)
76 1tvm_A PTS system, galactitol- 25.1 96 0.0033 22.4 4.4 36 2-37 21-62 (113)
77 1qb0_A Protein (M-phase induce 25.0 35 0.0012 26.9 2.1 30 4-33 111-153 (211)
78 1uar_A Rhodanese; sulfurtransf 24.7 23 0.00077 28.5 1.0 32 3-34 80-112 (285)
79 3f4a_A Uncharacterized protein 24.6 47 0.0016 25.5 2.7 23 3-25 105-127 (169)
80 3czc_A RMPB; alpha/beta sandwi 24.5 46 0.0016 23.9 2.5 27 3-29 19-49 (110)
81 3op3_A M-phase inducer phospha 23.8 48 0.0016 26.9 2.8 67 5-85 127-193 (216)
82 2a33_A Hypothetical protein; s 22.7 80 0.0027 25.8 3.9 31 4-34 15-52 (215)
83 2rp5_A Putative uncharacterize 22.5 28 0.00096 27.6 1.1 19 68-86 78-96 (136)
84 2p7n_A Pathogenicity island 1 22.3 50 0.0017 30.5 2.8 62 14-100 278-348 (407)
85 3hzu_A Thiosulfate sulfurtrans 21.9 46 0.0016 27.8 2.4 31 3-34 260-292 (318)
86 3hzu_A Thiosulfate sulfurtrans 21.8 49 0.0017 27.6 2.5 32 3-34 112-144 (318)
87 1jx7_A Hypothetical protein YC 21.4 1.4E+02 0.0048 20.3 4.5 64 4-73 3-76 (117)
88 2r85_A PURP protein PF1517; AT 20.7 1E+02 0.0035 24.5 4.1 33 1-36 1-33 (334)
89 3eaf_A ABC transporter, substr 20.5 1.3E+02 0.0043 24.5 4.7 42 113-154 26-71 (391)
90 1ydh_A AT5G11950; structural g 20.2 1E+02 0.0035 25.2 4.1 32 4-35 11-49 (216)
No 1
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=100.00 E-value=3.4e-101 Score=646.88 Aligned_cols=175 Identities=42% Similarity=0.655 Sum_probs=169.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhh
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~M 81 (190)
++|||||||||||||||||++|+++||+|+|||||++|||||||+|+||||+|||||++||+||.+||++||++||||+|
T Consensus 9 ~l~~avVCaSN~NRSMEaH~~L~k~G~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGiL~M 88 (198)
T 3p9y_A 9 KLAVAVVDSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDLESKDKEFYTQNGLLHM 88 (198)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHTTCEEEEEECSSSEEECCSSTTCCEEECTTCCHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred CceEEEEcCCCCcccHHHHHHHHhCCCceeecCCCceeEcCCCCCCCCCccCCCCcHHHHHHHHHHhhHHHHHHcCcHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHHHHHHHHHHH
Q 029616 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEV 161 (190)
Q Consensus 82 LdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~~ileLc~~l 161 (190)
|||||+||++|||||++.+ .|||||||||||||+|||||++|++.++|||||||||||||||||++||++|||||++|
T Consensus 89 LdRNr~iK~~PERfQ~~~~--~fDvIiTcEERvfD~VvedL~~R~~~~~~pVHViNvDIkDn~EeA~~Ga~~ileL~~~l 166 (198)
T 3p9y_A 89 LDRNRRIKKCPERFQDTKE--QFDIIVTVEERVYDLVVMHMESMESVDNRPVHVLNVDVVNNAEDALMGAFVITDMINMM 166 (198)
T ss_dssp HHHHHHHCSSCCBGGGCCC--CCSEEEESSHHHHHHHHHHHHTSCCSSCCEEEEEECCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HhcCccccCCccchhccCC--CcCEEEEeechhHHHHHHHHHhcccCcCceEEEEEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999976 89999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh----HHHHHhhhhcc
Q 029616 162 CLLLFF----IVSLVYHLKHH 178 (190)
Q Consensus 162 ~~~~~~----~~~~~~~~~~~ 178 (190)
+++.|+ |.+|...+++|
T Consensus 167 ~~~~d~e~~i~~il~~fe~~~ 187 (198)
T 3p9y_A 167 AKSTDLDNDIDELIQEFEERR 187 (198)
T ss_dssp HTCSSHHHHHHHHHHHHHHHH
T ss_pred HHchhHHHHHHHHHHHHHHhc
Confidence 999988 56777777644
No 2
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=100.00 E-value=4.3e-100 Score=646.00 Aligned_cols=175 Identities=51% Similarity=0.786 Sum_probs=169.6
Q ss_pred CceEEEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhh
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~M 81 (190)
+||||||||||||||||||++|+++||+|+|||||++|||||||+++||||+|||||++||+||.+||++||++||||+|
T Consensus 25 ~Lr~avVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~d~PnvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~M 104 (214)
T 4h3k_B 25 PLRVAVVSSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHM 104 (214)
T ss_dssp -CEEEEEESSSSSHHHHHHHHHHHTTCEEEEEECSSSEEECCSSTTCCEEECTTSCHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred CCeEEEECCCCcchhHHHHHHHHHCCCceEeecCCCccCCCCCCCCCCCccCCCCCHHHHHHHHHhHCHHHHHHcCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHHHHHHHHHHH
Q 029616 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEV 161 (190)
Q Consensus 82 LdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~~ileLc~~l 161 (190)
||||++||++|||||++.+ .|||||||||||||+|||||++|++.+++||||||||||||||||++||++|||||++|
T Consensus 105 LdRN~~iK~~PER~Q~~~~--~fDvViTcEERvfD~Vvedl~~R~~~~~~pvHVINvdIkDn~EeA~~Ga~~ileL~~~l 182 (214)
T 4h3k_B 105 LDRNKRIKPRPERFQNCKD--LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCI 182 (214)
T ss_dssp HHHHHTTCSSCCBGGGCCC--CCSEEEESSHHHHHHHHHHHHHSCCSSCCEEEEEEECCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HhCCccccCCChhhhccCC--CccEEEEccchhHHHHHHHHHhcCCCCCceEEEEEecccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 89999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh----HHHHHhhhhcc
Q 029616 162 CLLLFF----IVSLVYHLKHH 178 (190)
Q Consensus 162 ~~~~~~----~~~~~~~~~~~ 178 (190)
+++.|+ |.+|...++.|
T Consensus 183 e~~~D~e~~id~il~~fe~k~ 203 (214)
T 4h3k_B 183 QHTEDMENEIDELLQEFEEKS 203 (214)
T ss_dssp HHSSCHHHHHHHHHHHHHHHH
T ss_pred HhcccHHHHHHHHHHHHHHhc
Confidence 999997 66777777765
No 3
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=96.58 E-value=0.0018 Score=52.68 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=68.2
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC------CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHh
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRH------GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKR 75 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~------Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~ 75 (190)
++||-+||..|.=||=-|..+|++. ++.|.|-||+.. ||..++. ..-+ .-.+
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~---~G~~~dp-----------~a~~--------vl~e 91 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFAS---PNGKATP-----------HAVE--------ALFE 91 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCC---TTCBCCH-----------HHHH--------HHHH
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCc---CCCCCCH-----------HHHH--------HHHH
Confidence 4689999999999999999988864 789999999873 5655442 1111 2244
Q ss_pred cCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEE-------EeeccCCH
Q 029616 76 NGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI-------NLEVKDNH 144 (190)
Q Consensus 76 NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVI-------NvDIkDnh 144 (190)
.||= +...|..|.+..- ..||+|||.++.-.+.+.+..-. ....|+.+ .-||.|-.
T Consensus 92 ~Gid--------ishrar~lt~~d~-~~~DlIltMd~~~~~~l~~~~P~----~~~Kv~lL~~~~~~~~~dVpDPy 154 (184)
T 4etn_A 92 KHIA--------LNHVSSPLTEELM-ESADLVLAMTHQHKQIIASQFGR----YRDKVFTLKEYVTGSHGDVLDPF 154 (184)
T ss_dssp TTCC--------CCCBCCBCCHHHH-HHCSEEEESSHHHHHHHHHHCGG----GGGGEEEHHHHHHSSCCCCCCCT
T ss_pred cCCC--------chhccCcCCHHHc-CCCCEEEEcCcHHHHHHHHHCCC----ccceEEEhhhhccCCCCccCCCC
Confidence 5651 1123333432211 14999999998887777665432 11223332 56888875
No 4
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=96.55 E-value=0.0061 Score=48.96 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=31.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHh----C--CCCeeeecCCCc
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKR----H--GFDVSSYGTGAH 38 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k----~--Gf~V~SfGTGs~ 38 (190)
++||-+||.-|--||=-|..+|+. . .+.|.|.||+..
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~ 76 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAP 76 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCC
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCc
Confidence 579999999999999999998863 2 478999999764
No 5
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=96.35 E-value=0.0056 Score=47.90 Aligned_cols=111 Identities=16% Similarity=0.231 Sum_probs=67.3
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC----C-----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHH
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRH----G-----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPEL 72 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~----G-----f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~l 72 (190)
+.+|-.||..|.=||--|..+|++. | +.|.|-||+.. .||..++. ..-+ .
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~--~~g~~~~p-----------~a~~--------~ 65 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY--HVGESPDH-----------RTVS--------I 65 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT--TBTCCCCH-----------HHHH--------H
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC--cCCCCCCH-----------HHHH--------H
Confidence 4689999999999999999888753 3 77999999862 34544331 1112 2
Q ss_pred HHhcCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEE----------EeeccC
Q 029616 73 YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI----------NLEVKD 142 (190)
Q Consensus 73 Y~~NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVI----------NvDIkD 142 (190)
-.+.||= +...|..|.+..- ..||+|||-++.-.+.+.+..-. .....|+.+ .-||.|
T Consensus 66 l~~~Gid--------~s~~ar~l~~~~~-~~~DlIl~M~~~~~~~l~~~~p~---~~~~kv~~l~~~~~~~~~~~~~i~D 133 (161)
T 1d1q_A 66 CKQHGVK--------INHKGKQIKTKHF-DEYDYIIGMDESNINNLKKIQPE---GSKAKVCLFGDWNTNDGTVQTIIED 133 (161)
T ss_dssp HHHTTCC--------CCCCBCBCCGGGG-GTCSEEEESSHHHHHHHHHHCCT---TCSCEEEEGGGGCCCSSSSCSSCCC
T ss_pred HHHcCcC--------CCceEeECCHHHH-hhCCEEEEeCHHHHHHHHHHCCc---cchhhEEeHhhhcccccCCCCcCCC
Confidence 3445662 1123333433211 14999999988776666554321 122345553 248888
Q ss_pred CHH
Q 029616 143 NHE 145 (190)
Q Consensus 143 nhE 145 (190)
-.-
T Consensus 134 P~~ 136 (161)
T 1d1q_A 134 PWY 136 (161)
T ss_dssp CTT
T ss_pred CCC
Confidence 863
No 6
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=96.14 E-value=0.0073 Score=46.83 Aligned_cols=109 Identities=18% Similarity=0.280 Sum_probs=70.0
Q ss_pred ceEEEEccCCCCcchHHHHhHHh--CCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchh
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILP 80 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k--~Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~ 80 (190)
.+|-.||..|.=||=-|..+|++ .++.|.|-||+. .||..++. . .-+ .-.+.||=
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~~~~~v~SAGt~~---~~g~~~~p---------~--a~~--------~l~e~Gid- 65 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGA---LVDHTADE---------S--AIR--------VAEKNGLC- 65 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTSEEEEEETTC---CTTCCCCH---------H--HHH--------HHHHTTCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhcCCCEEEeccccC---CCCCCCCH---------H--HHH--------HHHHcCCC-
Confidence 48999999999999999999996 369999999998 58876552 1 111 22345551
Q ss_pred hhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEE-EEe----eccCCHH
Q 029616 81 MLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV-INL----EVKDNHE 145 (190)
Q Consensus 81 MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHV-INv----DIkDnhE 145 (190)
+ . ...|..|.+..- ..||+|||.++.-.+.++..+-. ....|+. ... ||.|-..
T Consensus 66 ~-~-----~~~ar~l~~~~~-~~~DlIi~m~~~~~~~l~~~~p~----~~~kv~~l~~~~~~~~i~DP~~ 124 (150)
T 2wmy_A 66 L-K-----GHRGTKFTSALA-RQYDLLLVMEYSHLEQISRIAPE----ARGKTMLFGHWLDSKEIPDPYR 124 (150)
T ss_dssp C-T-----TCCCCBCCHHHH-TTCSEEEESCHHHHHHHHHHCGG----GGGGEEETTTTSSSCCCCCCTT
T ss_pred c-c-----CCcccCCCHHHh-ccCCEEEEcCHHHHHHHHHhCCC----ccceEeehHHhCCCCCCCCCCC
Confidence 1 1 123444543211 14999999999877777664432 1112332 233 8998754
No 7
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=95.91 E-value=0.016 Score=45.91 Aligned_cols=108 Identities=19% Similarity=0.308 Sum_probs=65.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC----C---CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHh
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRH----G---FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKR 75 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~----G---f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~ 75 (190)
.+|-.||..|.=||--|..+|++. | +.|.|-||+.. -.|..++. ..-+ .-.+
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~--~~G~~~~~-----------~a~~--------~l~~ 65 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW--NLGEPPHE-----------GTQK--------ILNK 65 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC--STTCCCCH-----------HHHH--------HHHH
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc--ccCCCCCH-----------HHHH--------HHHH
Confidence 589999999999999999888753 3 78999999852 11433331 1112 2234
Q ss_pred cCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEE------E-eeccCCHH
Q 029616 76 NGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI------N-LEVKDNHE 145 (190)
Q Consensus 76 NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVI------N-vDIkDnhE 145 (190)
.|| .+ .. ..|..+.... .||+|||.++.-.+.+..-. +...+.||.+ . -||.|-.-
T Consensus 66 ~Gi-d~-~~-----~~ar~l~~~~---~~DlIi~Md~~~~~~l~~~~----p~~~~kv~~l~~~~~~~~~~VpDPyy 128 (158)
T 3rof_A 66 HNI-PF-DG-----MISELFEATD---DFDYIVAMDQSNVDNIKSIN----PNLKGQLFKLLEFSNMEESDVPDPYY 128 (158)
T ss_dssp TTC-CC-TT-----CCCCBCCTTC---CCSEEEESSHHHHHHHHHHC----TTCCSEEEEGGGGCCSSCSSCCCHHH
T ss_pred cCC-Cc-CC-----CcceECChhh---cCCEEEEcCHHHHHHHHHhc----CCCcCEEEEehhhccCCCCcCCCCCC
Confidence 454 11 10 1233333222 49999999988777665543 2222356654 2 68888864
No 8
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=95.77 E-value=0.01 Score=47.28 Aligned_cols=109 Identities=22% Similarity=0.293 Sum_probs=69.6
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC--CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchh
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILP 80 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~--Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~ 80 (190)
.+|-.||.-|.=||=-|..+|++. ++.|.|-||+. .||..++. . .-+ .-.+.||=
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~~~~~v~SAGt~~---~~g~~~~p---------~--a~~--------vl~e~Gid- 79 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGA---LVGKGADP---------T--AIS--------VAAEHQLS- 79 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTCEEEEEETTC---CTTCCCCH---------H--HHH--------HHHHTTCC-
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCC---CCCCCCCH---------H--HHH--------HHHHcCCC-
Confidence 489999999999999999999963 69999999998 68877552 1 111 22345551
Q ss_pred hhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEE-EEe----eccCCHH
Q 029616 81 MLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV-INL----EVKDNHE 145 (190)
Q Consensus 81 MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHV-INv----DIkDnhE 145 (190)
+ . ...|..|.+..- ..||+|||.++.-.+.++..+-.- ..+ ++. ... ||.|-..
T Consensus 80 ~-s-----~~~sr~l~~~~~-~~~DlIitM~~~~~~~l~~~~p~~---~~k-v~~l~~w~~~~~I~DP~~ 138 (167)
T 2fek_A 80 L-E-----GHCARQISRRLC-RNYDLILTMEKRHIERLCEMAPEM---RGK-VMLFGHWDNECEIPDPYR 138 (167)
T ss_dssp C-T-----TCCCCBCCHHHH-HHSSEEEESCHHHHHHHHHHCGGG---GGG-EEEGGGGTTTCCCCCCTT
T ss_pred c-c-----CCcCccCCHHHh-ccCCEEEEcCHHHHHHHHHhCCcc---cce-EEehHHhCCCCCCCCCCC
Confidence 1 1 123444433211 149999999998777776644321 112 332 233 8998854
No 9
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=95.49 E-value=0.014 Score=46.58 Aligned_cols=108 Identities=18% Similarity=0.270 Sum_probs=68.4
Q ss_pred ceEEEEccCCCCcchHHHHhHHh--CCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchh
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILP 80 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k--~Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~ 80 (190)
.+|-.||..|.=||=-|..+|++ .++.|.|-||+. .||..++. .. - +.-.+.||
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~~~~~v~SAGt~~---~~g~~~~p---------~a--~--------~vl~e~Gi-- 82 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGA---LVDHAADE---------SA--I--------RVAEKNGL-- 82 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHSTTSEEEEEETTC---CTTCCCCH---------HH--H--------HC---CCC--
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCC---CCCCCCCH---------HH--H--------HHHHHcCC--
Confidence 48999999999999999999996 369999999998 68876552 11 1 11233454
Q ss_pred hhhcccCC-CCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEE-EEe----eccCCHH
Q 029616 81 MLKRNIGV-KAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV-INL----EVKDNHE 145 (190)
Q Consensus 81 MLdRNr~I-K~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHV-INv----DIkDnhE 145 (190)
.+ ...|..|.+..- ..||+|||.++.-.+.++..+-. ....|+. ... ||.|-..
T Consensus 83 ------d~s~~~sr~l~~~~~-~~~DlIitM~~~~~~~l~~~~p~----~~~kv~~l~~w~~~~~I~DP~~ 142 (168)
T 2wja_A 83 ------CLKGHRGTKFTSALA-RQYDLLLVMEYSHLEQISRIAPE----ARGKTMLFGHWLDSKEIPDPYR 142 (168)
T ss_dssp ------CCTTCCCCBCCHHHH-TTCSEEEESSHHHHHHHHHHCTT----TGGGEEETTCC---CCCCCCTT
T ss_pred ------CcccCccCCCChhHh-ccCCEEEEcCHHHHHHHHHhCCc----ccceEEeeHhhCCCCCCCCCCC
Confidence 12 123555543211 15999999998877766664332 1112332 233 8999753
No 10
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=95.11 E-value=0.025 Score=42.40 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=62.0
Q ss_pred eEEEEccCCCCcchHHHHhHHhC--CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhh
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~--Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~M 81 (190)
||-.||..|.=||--|..+|++. ++.|.|-||+. |..++ ...-+ .-.+.||=
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~v~SAGt~~-----g~~~~-----------~~a~~--------~l~e~Gid-- 54 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAKSWKAESAGVEK-----AERVD-----------ETVKR--------LLAERGLK-- 54 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCSSCCEEEEESSC-----CSSCC-----------HHHHH--------HHHTTTCC--
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcCCEEEEecCCCC-----CCCCC-----------HHHHH--------HHHHcCcC--
Confidence 57899999999999999999987 69999999995 43322 11222 23445652
Q ss_pred hhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEEEeeccCCHH
Q 029616 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHE 145 (190)
Q Consensus 82 LdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhE 145 (190)
-...|..|.+..- ..||+|||.++. + .-+.....++....||.|-..
T Consensus 55 ------s~~~sr~l~~~~~-~~~D~Ii~m~~~------~----~~p~~~~~~~~~~~~i~DP~~ 101 (124)
T 1y1l_A 55 ------AKEKPRTVDEVNL-DDFDLIVTVCEE------S----SCVVLPTDKPVTRWHIENPAG 101 (124)
T ss_dssp ------CCSSCCBGGGSCG-GGCSCEEEEECS------S----CCBCCSCSSCEEEEECCCCTT
T ss_pred ------CCCccccCChhHh-cCCCEEEEecCc------c----cCcCCCCCeeecceecCCCCC
Confidence 1123444543321 259999999875 1 111111223446679999874
No 11
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=94.50 E-value=0.022 Score=43.71 Aligned_cols=113 Identities=18% Similarity=0.208 Sum_probs=66.3
Q ss_pred CCceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcC
Q 029616 1 MKYRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNG 77 (190)
Q Consensus 1 ~~l~~AvVCaSN~NRSMEAH~~L~k~---Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NG 77 (190)
++.+|-.||..|.=||--|..+|++. .+.|.|-||+.. -+|..++ ...-+- -.+.|
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~--~~g~~~~-----------p~a~~~--------l~e~G 61 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF--HVGQSPD-----------TRSQKV--------CKSNG 61 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT--SCSCSCT-----------HHHHHH--------HHHHS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc--ccCCCCC-----------HHHHHH--------HHHcC
Confidence 45789999999999999999999864 389999999851 0132222 222222 23345
Q ss_pred chhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEEE--eeccCCHH
Q 029616 78 ILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVIN--LEVKDNHE 145 (190)
Q Consensus 78 lL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVIN--vDIkDnhE 145 (190)
|= + . ...|..|.+..- ..||+|||-++.-.+.+.+..-. .....++.+. -||.|-.-
T Consensus 62 id-~-s-----~~~sr~l~~~~~-~~~DlIi~m~~~~~~~l~~~~p~---~~~~kv~~l~~~~~i~DP~~ 120 (146)
T 1p8a_A 62 VD-I-S-----KQRARQITKADF-SKFDVIAALDQSILSDINSMKPS---NCRAKVVLFNPPNGVDDPYY 120 (146)
T ss_dssp CC-C-C-----CCCCCCCCSHHH-HSCSEEEESSHHHHHHHHHHCCS---SCSCEEEECSCTTSSCCCSS
T ss_pred CC-h-h-----cCeeccCCHhHh-hcCCEEEEeChHHHHHHHHHCCc---ccCCeEEEeCCCCCCCCCCC
Confidence 41 1 1 113333432211 14999999998776665543221 1122344432 28998865
No 12
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=94.48 E-value=0.023 Score=43.11 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=32.5
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCc
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAH 38 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~---Gf~V~SfGTGs~ 38 (190)
+.+|-.||..|.=||=-|..+|++. ++.|.|-||+.+
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~~ 42 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETH 42 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCC
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCCC
Confidence 4679999999999999999999975 478999999963
No 13
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=94.36 E-value=0.035 Score=43.30 Aligned_cols=89 Identities=18% Similarity=0.265 Sum_probs=56.7
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC----C----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRH----G----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~----G----f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY 73 (190)
+.+|-+||..|.=||=-|..+|++. | +.|.|-||+.. .+|..++ ...-+- -
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~--~~G~~~~-----------p~a~~~--------l 62 (163)
T 1u2p_A 4 PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW--HVGSCAD-----------ERAAGV--------L 62 (163)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT--TTTCCCC-----------HHHHHH--------H
T ss_pred CCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC--cCCCCCC-----------HHHHHH--------H
Confidence 4689999999999999999888765 4 67999999862 2354433 122222 2
Q ss_pred HhcCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHH
Q 029616 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121 (190)
Q Consensus 74 ~~NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vved 121 (190)
.+.||= +...|..|....- .. |+|||-++.-.+.+.+.
T Consensus 63 ~~~Gid--------~s~~ar~l~~~~~-~~-DlIi~Md~~~~~~l~~~ 100 (163)
T 1u2p_A 63 RAHGYP--------TDHRAAQVGTEHL-AA-DLLVALDRNHARLLRQL 100 (163)
T ss_dssp HHTTCC--------CCCCCCBCCHHHH-TS-SEEEESSHHHHHHHHHT
T ss_pred HHcCcC--------CCceeeECChhhc-cC-CEEEEeCHHHHHHHHHH
Confidence 345651 1123444433211 25 99999998877766553
No 14
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=94.11 E-value=0.056 Score=42.24 Aligned_cols=90 Identities=19% Similarity=0.304 Sum_probs=58.0
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC----C----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHH
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRH----G----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYK 74 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~----G----f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~ 74 (190)
.+|-+||..|.=||=-|..+|++. | +.|.|-||+.. .||..++. ..-+ .-.
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~--~~g~~~~~-----------~a~~--------~l~ 60 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE--HDGEGMHY-----------GTKN--------KLA 60 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS--STTCCCCH-----------HHHH--------HHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc--ccCCCCCH-----------HHHH--------HHH
Confidence 379999999999999999998853 3 78999999963 35555441 1222 223
Q ss_pred hcCchhhhhcccCCC-CCccccccccCCCcccEEEecccchHHHHHHHH
Q 029616 75 RNGILPMLKRNIGVK-AAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122 (190)
Q Consensus 75 ~NGlL~MLdRNr~IK-~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl 122 (190)
+.|| .+. ..|..|.+..- ..||+|||-++.-.+.+.+..
T Consensus 61 ~~Gi--------d~s~~~ar~l~~~d~-~~~DlIi~Md~~~~~~l~~~~ 100 (156)
T 2gi4_A 61 QLNI--------EHKNFTSKKLTQKLC-DESDFLITMDNSNFKNVLKNF 100 (156)
T ss_dssp HTSC--------SCCCCCCCBCCHHHH-TTCSEEECCCHHHHHHHHHHS
T ss_pred HcCC--------CccCCccccCCHHHh-ccCCEEEEECChHHHHHHHHC
Confidence 4454 111 13444433211 159999999988877765543
No 15
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=94.08 E-value=0.049 Score=42.70 Aligned_cols=102 Identities=16% Similarity=0.224 Sum_probs=62.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCch
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGIL 79 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~---Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL 79 (190)
.+|-.||..|.-||--|..+|++. ++.|.|-||+. |..++. ..-+ .-++.||
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~-----g~~~dp-----------~a~~--------vl~e~Gi- 75 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKP-----AQGLNQ-----------LSVE--------SIAEVGA- 75 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSC-----CSSCCH-----------HHHH--------HHHHTTC-
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCC-----CCCCCH-----------HHHH--------HHHHcCC-
Confidence 579999999999999999999874 58999999983 543331 1111 2234554
Q ss_pred hhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEEEeeccCCHH
Q 029616 80 PMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHE 145 (190)
Q Consensus 80 ~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhE 145 (190)
.+ . ...|..|.+..- ..||+|||.++...+. + .....+ + ...-||.|-.-
T Consensus 76 di-s-----~h~ar~l~~~~~-~~~DlIitM~~~~~~~----~---p~~~~k-~-~~~w~VpDPy~ 125 (148)
T 3rh0_A 76 DM-S-----QGIPKAIDPELL-RTVDRVVILGDDAQVD----M---PESAQG-A-LERWSIEEPDA 125 (148)
T ss_dssp CC-T-----TCCCCBCCHHHH-HHCSEEEEESSSCCCC----C---CTTCCS-E-EEEECCCCCSC
T ss_pred Cc-C-----CCeeeECCHHHh-cCCCEEEEecChHHhh----C---ccCCCC-E-eecCCcCCCCC
Confidence 11 1 123444443211 1499999997766432 1 111122 2 56779999854
No 16
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=94.05 E-value=0.031 Score=42.43 Aligned_cols=36 Identities=28% Similarity=0.229 Sum_probs=31.8
Q ss_pred CceEEEEccCCCCcchHHHHhHHhCC---CCeeeecCCC
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRHG---FDVSSYGTGA 37 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~G---f~V~SfGTGs 37 (190)
+.+|-+||..|.=||=-|..+|++.. +.|.|-||+.
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 45799999999999999999999753 7899999996
No 17
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=93.77 E-value=0.037 Score=42.03 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=30.2
Q ss_pred eEEEEccCCCCcchHHHHhHHhC---CCCeeeecCC
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTG 36 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~---Gf~V~SfGTG 36 (190)
+|-.||.-|.=||=-|..+|++. ++.|.|-||+
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 79999999999999999999975 4889999998
No 18
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=93.54 E-value=0.038 Score=43.43 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=67.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHh----C----CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKR----H----GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k----~----Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY 73 (190)
+.+|-.||..|.=||--|..+|++ + .+.|.|-||+.. -.|..++ ...-+- -
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~--~~G~~~~-----------~~a~~~--------l 63 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY--EIGNPPD-----------YRGQSC--------M 63 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST--TTTCCCC-----------HHHHHH--------H
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc--ccCCCCC-----------HHHHHH--------H
Confidence 568999999999999989888875 3 378999999852 1243333 222222 2
Q ss_pred HhcCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEE-------EeeccCCHH
Q 029616 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI-------NLEVKDNHE 145 (190)
Q Consensus 74 ~~NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVI-------NvDIkDnhE 145 (190)
.+.||= + . ..|..+....- ..||+|||.++.-++.+.+-.-.- +.....|+.+ .-||.|-.-
T Consensus 64 ~~~Gid-~-~------~~ar~l~~~~~-~~~DlIi~M~~~n~~~l~~~~p~~-~~~~~kv~ll~~~~~~~~~dVpDPy~ 132 (157)
T 3n8i_A 64 KRHGIP-M-S------HVARQITKEDF-ATFDYILCMDESNLRDLNRKSNQV-KTCKAKIELLGSYDPQKQLIIEDPYY 132 (157)
T ss_dssp HHTTCC-C-C------CCCCBCCHHHH-HHCSEEEESSHHHHHHHHHHHTTS-SCCCCEEEEGGGGCTTCCCCCCCCTT
T ss_pred HHcCcC-C-C------CceeECCHHHc-CCCCEEEEeCcHHHHHHHHHCCCc-cCccceEEEHHHhCcCCCCCCCCCCC
Confidence 456652 2 1 12233322110 149999999999888877655321 0122334433 237888654
No 19
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=93.37 E-value=0.044 Score=43.75 Aligned_cols=89 Identities=20% Similarity=0.330 Sum_probs=54.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHh----CC----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHH
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKR----HG----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYK 74 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k----~G----f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~ 74 (190)
+||-+||.-|.=||=-|..+|++ +| +.|.|.||+.. -+|..++. ..- +.-+
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~--~~G~~~d~-----------~a~--------~~l~ 77 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGW--HIGNPPHE-----------GTQ--------EILR 77 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT--TTTCCCCH-----------HHH--------HHHH
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccC--CCCCCCCH-----------HHH--------HHHH
Confidence 58999999999999999988874 44 67999999863 13443331 111 1223
Q ss_pred hcCchhhhhcccCCCC-CccccccccCCCcccEEEecccchHHHHHHH
Q 029616 75 RNGILPMLKRNIGVKA-APQRWQDNALDGSFDIVFTFEEKVFDTVVED 121 (190)
Q Consensus 75 ~NGlL~MLdRNr~IK~-~PERfQ~~~~~~~fDvIiTcEERvfD~Vved 121 (190)
+.|| .+-. .+..+.... -..||+|||-++.-.+.+..-
T Consensus 78 ~~Gi--------d~s~h~ar~l~~~d-~~~~DlIl~Md~~~~~~l~~~ 116 (173)
T 4etm_A 78 REGI--------SFDGMLARQVSEQD-LDDFDYIIAMDAENIGSLRSM 116 (173)
T ss_dssp HTTC--------CCTTCCCCBCCHHH-HHHCSEEEESSHHHHHHHHHH
T ss_pred HCCc--------cccCCccccCCHhh-cCCCCEEEEeCchHHHHHHHH
Confidence 3443 1111 122232211 014999999999888777553
No 20
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=93.09 E-value=0.065 Score=44.60 Aligned_cols=41 Identities=27% Similarity=0.370 Sum_probs=34.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCceecCCCCCC
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAHVKLPGPSLR 47 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~---Gf~V~SfGTGs~VkLPGps~d 47 (190)
+.+|-.||..|.-||--|..+|++. ++.|.|-||. ||..++
T Consensus 81 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt~-----~g~~~d 124 (213)
T 3t38_A 81 VPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGSL-----PASEIH 124 (213)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEESS-----CCSSCC
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhccCceEEEecccC-----CCCCCC
Confidence 5789999999999999999998864 4899999985 775544
No 21
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=92.88 E-value=0.068 Score=41.76 Aligned_cols=110 Identities=22% Similarity=0.337 Sum_probs=66.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC----C----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029616 2 KYRYAMVCSSNQNRSMEAHYLLKRH----G----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEAH~~L~k~----G----f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY 73 (190)
+.+|-.||..|.=||--|..+|++. | +.|.|-||+.. .+|..++ ...-+ .-
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~--~~g~~~~-----------p~a~~--------~l 62 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAW--HVGEPMD-----------PRARR--------VL 62 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCT--TTTCCCC-----------HHHHH--------HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCC--ccCCCCC-----------HHHHH--------HH
Confidence 4689999999999999999888853 4 57999999951 2343333 11222 22
Q ss_pred HhcCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHHhcCCCCCCCeEEEE-Ee----eccCCHH
Q 029616 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI-NL----EVKDNHE 145 (190)
Q Consensus 74 ~~NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVI-Nv----DIkDnhE 145 (190)
.+.||= +...|..|.+..- ..||+|||.++.-.+.+.+..-. ... .++.+ .. ||.|-.-
T Consensus 63 ~e~Gid--------~s~~ar~l~~~~~-~~~DlIi~M~~~~~~~l~~~~p~---~~~-kv~~l~~~~~~~~i~DP~~ 126 (161)
T 2cwd_A 63 EEEGAY--------FPHVARRLTREDV-LAYDHILVMDRENLEEVLRRFPE---ARG-KVRLVLEELGGGEVQDPYY 126 (161)
T ss_dssp HHHTCC--------CCCCCCBCCHHHH-HHCSEEEESSHHHHHHHHHHCGG---GTT-TEEEGGGGGTCCCCCCCTT
T ss_pred HHcCcC--------ccccccCCCHhHh-ccCCEEEECChHHHHHHHHHCCC---ccC-cEEeehhhcCCCCCCCCCC
Confidence 345652 1123444432211 14999999998887766654332 112 34433 44 8999753
No 22
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=92.32 E-value=0.062 Score=42.17 Aligned_cols=90 Identities=20% Similarity=0.338 Sum_probs=56.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHh----CC----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHH
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKR----HG----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYK 74 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k----~G----f~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~ 74 (190)
.+|-.||..|.=||=-|..+|++ +| +.|.|-||+.. ..|..++ ...-+ .-.
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~--~~G~~~~-----------~~a~~--------~l~ 63 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY--HEGQQAD-----------SRMRK--------VGK 63 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT--TTTCBCC-----------HHHHH--------HHH
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc--ccCCCCC-----------HHHHH--------HHH
Confidence 58999999999999889888774 33 68999999862 1343333 11222 234
Q ss_pred hcCchhhhhcccCCCCCccccccccCCCcccEEEecccchHHHHHHHH
Q 029616 75 RNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122 (190)
Q Consensus 75 ~NGlL~MLdRNr~IK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl 122 (190)
+.|| .+ . ..|..+.+..- ..||+|||.++.-.+.+..-.
T Consensus 64 ~~Gi-d~-~------~~ar~l~~~~~-~~~DlIl~Md~~~~~~l~~~~ 102 (161)
T 3jvi_A 64 SRGY-QV-D------SISRPVVSSDF-KNFDYIFAMDNDNYYELLDRC 102 (161)
T ss_dssp HTTC-CC-C------CBCCBCCHHHH-HHCSEEEESSHHHHHHHHHHS
T ss_pred HcCc-CC-C------CeeeECCHHHh-cCCCEEEEeChHHHHHHHHhc
Confidence 5565 22 2 22333332210 149999999988777776644
No 23
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=87.08 E-value=0.43 Score=34.40 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.1
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeee
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSY 33 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~Sf 33 (190)
..+.++|.| .+||..|-..|+++||++.+.
T Consensus 57 ~~ivv~C~~-G~rS~~aa~~L~~~G~~~~~l 86 (103)
T 3iwh_A 57 EIYYIVCAG-GVRSAKVVEYLEANGIDAVNV 86 (103)
T ss_dssp SEEEEECSS-SSHHHHHHHHHHTTTCEEEEE
T ss_pred CeEEEECCC-CHHHHHHHHHHHHcCCCEEEe
Confidence 368899987 589999999999999988765
No 24
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=87.03 E-value=0.61 Score=31.38 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=26.4
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..+-++|.+ .+||..|=..|++.|| +|..+|
T Consensus 42 ~~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~lG 73 (85)
T 2jtq_A 42 DTVKVYCNA-GRQSGQAKEILSEMGYTHVENAG 73 (85)
T ss_dssp SEEEEEESS-SHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CcEEEEcCC-CchHHHHHHHHHHcCCCCEEecc
Confidence 368899987 4799999999999999 587774
No 25
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=86.29 E-value=0.42 Score=33.27 Aligned_cols=31 Identities=19% Similarity=0.442 Sum_probs=26.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfG 34 (190)
..+-++|.+. +||..|-..|++.||+|..+-
T Consensus 57 ~~ivvyC~~g-~rs~~a~~~L~~~G~~v~~l~ 87 (100)
T 3foj_A 57 ETYYIICKAG-GRSAQVVQYLEQNGVNAVNVE 87 (100)
T ss_dssp SEEEEECSSS-HHHHHHHHHHHTTTCEEEEET
T ss_pred CcEEEEcCCC-chHHHHHHHHHHCCCCEEEec
Confidence 3688999775 899999999999999998873
No 26
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=85.82 E-value=0.47 Score=33.73 Aligned_cols=31 Identities=29% Similarity=0.558 Sum_probs=26.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfG 34 (190)
..+-++|.+ .+||..|-..|++.||+|..+-
T Consensus 56 ~~ivvyC~~-G~rs~~aa~~L~~~G~~v~~l~ 86 (108)
T 3gk5_A 56 KKYAVICAH-GNRSAAAVEFLSQLGLNIVDVE 86 (108)
T ss_dssp SCEEEECSS-SHHHHHHHHHHHTTTCCEEEET
T ss_pred CeEEEEcCC-CcHHHHHHHHHHHcCCCEEEEc
Confidence 358899966 4899999999999999998874
No 27
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=85.57 E-value=0.53 Score=33.40 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=28.3
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeecC
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGT 35 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGT 35 (190)
..+.++|+...+||..|=..|++.||+|..+--
T Consensus 90 ~~ivvyC~~~G~rs~~a~~~L~~~G~~v~~l~G 122 (134)
T 3g5j_A 90 DNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEG 122 (134)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHHTTCCCEEETT
T ss_pred CeEEEEECCCChHHHHHHHHHHHcCCceEEEeC
Confidence 468899987779999999999999999987743
No 28
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=84.84 E-value=0.73 Score=33.85 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=27.5
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 36 (190)
.+.|+|.|- +||..|=..|+++|| +|.++--|
T Consensus 76 ~ivv~C~sG-~RS~~aa~~L~~~G~~~v~~l~GG 108 (134)
T 1vee_A 76 TLYILDKFD-GNSELVAELVALNGFKSAYAIKDG 108 (134)
T ss_dssp EEEEECSSS-TTHHHHHHHHHHHTCSEEEECTTT
T ss_pred EEEEEeCCC-CcHHHHHHHHHHcCCcceEEecCC
Confidence 588999987 699999999999999 59887555
No 29
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=84.07 E-value=0.74 Score=34.60 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=28.7
Q ss_pred ceEEEEccCCC-CcchHHHHhHHhCCCCeeeec
Q 029616 3 YRYAMVCSSNQ-NRSMEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~-NRSMEAH~~L~k~Gf~V~SfG 34 (190)
..+-++|.+.. +||..|-..|++.||+|..+-
T Consensus 73 ~~ivvyC~~g~~~rs~~aa~~L~~~G~~v~~l~ 105 (144)
T 3nhv_A 73 KVIITYCWGPACNGATKAAAKFAQLGFRVKELI 105 (144)
T ss_dssp SEEEEECSCTTCCHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEECCCCccHHHHHHHHHHHCCCeEEEeC
Confidence 36889999987 999999999999999999884
No 30
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=83.80 E-value=0.79 Score=31.90 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.6
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfG 34 (190)
..+-++|.+. +||..|=..|++.||+|..+-
T Consensus 57 ~~iv~yC~~g-~rs~~a~~~L~~~G~~v~~l~ 87 (103)
T 3eme_A 57 EIYYIVCAGG-VRSAKVVEYLEANGIDAVNVE 87 (103)
T ss_dssp SEEEEECSSS-SHHHHHHHHHHTTTCEEEEET
T ss_pred CeEEEECCCC-hHHHHHHHHHHHCCCCeEEeC
Confidence 3578999876 899999999999999988763
No 31
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=80.82 E-value=1.9 Score=32.04 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=27.1
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 36 (190)
.+.++|.|. +||..|=..|++.|| +|..+--|
T Consensus 82 ~ivvyC~~G-~rS~~aa~~L~~~G~~~v~~l~GG 114 (148)
T 2fsx_A 82 PVIFLCRSG-NRSIGAAEVATEAGITPAYNVLDG 114 (148)
T ss_dssp CEEEECSSS-STHHHHHHHHHHTTCCSEEEETTT
T ss_pred EEEEEcCCC-hhHHHHHHHHHHcCCcceEEEcCC
Confidence 588999885 799999999999999 69888433
No 32
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=79.50 E-value=1.8 Score=32.13 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=26.3
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..+.++|.+. +||..|=..|++.|| +|..+-
T Consensus 83 ~~ivvyC~~G-~rS~~aa~~L~~~G~~~v~~l~ 114 (137)
T 1qxn_A 83 KPVVVFCKTA-ARAALAGKTLREYGFKTIYNSE 114 (137)
T ss_dssp SCEEEECCSS-SCHHHHHHHHHHHTCSCEEEES
T ss_pred CeEEEEcCCC-cHHHHHHHHHHHcCCcceEEEc
Confidence 3588999886 599999999999999 688773
No 33
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=78.23 E-value=1.3 Score=30.40 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=25.6
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfG 34 (190)
.+-++|.+. +||..|=..|++.||+|..+-
T Consensus 55 ~ivvyC~~g-~rs~~a~~~L~~~G~~v~~l~ 84 (94)
T 1wv9_A 55 PLLLVCEKG-LLSQVAALYLEAEGYEAMSLE 84 (94)
T ss_dssp CEEEECSSS-HHHHHHHHHHHHHTCCEEEET
T ss_pred CEEEEcCCC-ChHHHHHHHHHHcCCcEEEEc
Confidence 578899885 699999999999999977663
No 34
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=77.04 E-value=1.5 Score=31.97 Aligned_cols=31 Identities=29% Similarity=0.495 Sum_probs=26.1
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..+.++|.+ .+||..|-..|++.|| +|..+-
T Consensus 92 ~~ivvyC~~-G~rs~~aa~~L~~~G~~~v~~l~ 123 (139)
T 3d1p_A 92 KELIFYCAS-GKRGGEAQKVASSHGYSNTSLYP 123 (139)
T ss_dssp SEEEEECSS-SHHHHHHHHHHHTTTCCSEEECT
T ss_pred CeEEEECCC-CchHHHHHHHHHHcCCCCeEEeC
Confidence 358899998 5899999999999999 577763
No 35
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=75.96 E-value=1.8 Score=30.34 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=25.6
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..+.++|.+. +||..|-..|++.|| +|..+-
T Consensus 59 ~~ivvyc~~g-~rs~~a~~~L~~~G~~~v~~l~ 90 (108)
T 1gmx_A 59 TPVMVMCYHG-NSSKGAAQYLLQQGYDVVYSID 90 (108)
T ss_dssp SCEEEECSSS-SHHHHHHHHHHHHTCSSEEEET
T ss_pred CCEEEEcCCC-chHHHHHHHHHHcCCceEEEec
Confidence 3578999875 699999999999999 577653
No 36
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=73.12 E-value=2.1 Score=31.17 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=26.9
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 36 (190)
..+.++|.+. +||..|=..|++.|| +|..+--|
T Consensus 83 ~~ivvyC~~G-~rs~~aa~~L~~~G~~~v~~l~GG 116 (129)
T 1tq1_A 83 DNIIVGCQSG-GRSIKATTDLLHAGFTGVKDIVGG 116 (129)
T ss_dssp SSEEEEESSC-SHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CeEEEECCCC-cHHHHHHHHHHHcCCCCeEEeCCc
Confidence 3588999974 799999999999999 58777433
No 37
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=70.53 E-value=2.1 Score=30.11 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=24.6
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeee
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSY 33 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 33 (190)
.+.++|.+ .+||..|-..|++.|| +|..+
T Consensus 54 ~ivvyc~~-g~rs~~a~~~L~~~G~~~v~~l 83 (106)
T 3hix_A 54 DIYVYGAG-DEQTSQAVNLLRSAGFEHVSEL 83 (106)
T ss_dssp CEEEECSS-HHHHHHHHHHHHHTTCSCEEEC
T ss_pred eEEEEECC-CChHHHHHHHHHHcCCcCEEEe
Confidence 57899987 5789999999999999 57765
No 38
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=69.89 E-value=2.5 Score=30.59 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=26.4
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..+-++|.+. +||..|-..|++.|| +|..+-
T Consensus 87 ~~ivvyC~~G-~rs~~a~~~L~~~G~~~v~~l~ 118 (139)
T 2hhg_A 87 KKFVFYCAGG-LRSALAAKTAQDMGLKPVAHIE 118 (139)
T ss_dssp SEEEEECSSS-HHHHHHHHHHHHHTCCSEEEET
T ss_pred CeEEEECCCC-hHHHHHHHHHHHcCCCCeEEec
Confidence 3588999986 799999999999999 588773
No 39
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=66.02 E-value=4.4 Score=29.19 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=25.4
Q ss_pred eEEEEccCCCCc--chHHHHhHHhCCCCeeeec
Q 029616 4 RYAMVCSSNQNR--SMEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NR--SMEAH~~L~k~Gf~V~SfG 34 (190)
.+-++|.+.. | |..|=..|++.||+|..+-
T Consensus 73 ~ivvyC~~g~-r~~s~~a~~~L~~~G~~v~~l~ 104 (124)
T 3flh_A 73 TYVVYDWTGG-TTLGKTALLVLLSAGFEAYELA 104 (124)
T ss_dssp EEEEECSSSS-CSHHHHHHHHHHHHTCEEEEET
T ss_pred eEEEEeCCCC-chHHHHHHHHHHHcCCeEEEeC
Confidence 5889998864 5 8999999999999988773
No 40
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=63.66 E-value=3.6 Score=30.75 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=25.3
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeee
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSY 33 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 33 (190)
.+.++|.+. +||..|=..|++.|| +|..+
T Consensus 58 ~ivvyC~~g-~rs~~aa~~L~~~G~~~v~~l 87 (141)
T 3ilm_A 58 DIYVYGAGD-EQTSQAVNLLRSAGFEHVSEL 87 (141)
T ss_dssp EEEEECSSH-HHHHHHHHHHHHTTCCSEEEC
T ss_pred eEEEEECCC-hHHHHHHHHHHHcCCCCEEEe
Confidence 578999965 899999999999999 58776
No 41
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=62.78 E-value=7.8 Score=31.59 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=21.9
Q ss_pred eEEEEccCCCCcc----------hHHHHhHHhCCCCeeeec
Q 029616 4 RYAMVCSSNQNRS----------MEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NRS----------MEAH~~L~k~Gf~V~SfG 34 (190)
+|||+|+|+.+.. -|.=+.|.++|+.|.| |
T Consensus 25 ~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs-G 64 (195)
T 1rcu_A 25 KVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN-G 64 (195)
T ss_dssp EEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE-C
T ss_pred eEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe-C
Confidence 6999999876422 1223467899999998 6
No 42
>2fb7_A SM-like protein, LSM-14_N (RAP55); DR.13312, BC055387, AAH55387, stronGly BENT five-stranded antiparallel beta- sheet, structural genomics, PSI; NMR {Danio rerio} SCOP: b.38.1.5 PDB: 2vxf_A
Probab=60.32 E-value=4.2 Score=30.68 Aligned_cols=41 Identities=22% Similarity=0.371 Sum_probs=26.8
Q ss_pred EEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccC
Q 029616 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF 54 (190)
Q Consensus 6 AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~dkPNvY~F 54 (190)
++.++-|...|+=| | -+|+||||-.+-. .+|-+....||++
T Consensus 34 GiL~~In~~~sTia---L----~nVRsfGTEgR~~-~~~ipp~~~vyey 74 (95)
T 2fb7_A 34 GILYTIDTENSTVA---L----AKVRSFGTEDRPT-DRPIAPRDETFEY 74 (95)
T ss_dssp EEEEEEETTTTEEE---E----ESCCCCSCCSSSC-SSCCCSCCCCSSC
T ss_pred EEEecccCccCEEE---E----EeeeEecccCCCC-CCccCCCCcceeE
Confidence 45666666666432 3 2899999988732 3556666677775
No 43
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=55.48 E-value=9.8 Score=26.72 Aligned_cols=30 Identities=13% Similarity=0.322 Sum_probs=24.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeee
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSY 33 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~Sf 33 (190)
..+-++|.+. +||..|=..|++.||....+
T Consensus 57 ~~ivvyC~~G-~rs~~aa~~L~~~G~~~~~l 86 (110)
T 2k0z_A 57 KKVLLHCRAG-RRALDAAKSMHELGYTPYYL 86 (110)
T ss_dssp SCEEEECSSS-HHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEEeCCC-chHHHHHHHHHHCCCCEEEe
Confidence 3578999875 79999999999999965444
No 44
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=52.35 E-value=30 Score=27.67 Aligned_cols=42 Identities=21% Similarity=0.105 Sum_probs=34.3
Q ss_pred chHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHHHH
Q 029616 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLT 154 (190)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~~i 154 (190)
+-....+|++|.+++-..++|-++-.|-+-+++.|...+..+
T Consensus 29 ~g~~lAv~~iN~~GGi~Gr~ielv~~D~~~~p~~a~~~a~~l 70 (353)
T 4gnr_A 29 KGAQLAVDEINAAGGIDGKQIEVVDKDNKSETAEAASVTTNL 70 (353)
T ss_dssp HHHHHHHHHHHHTTCBTTBEEEEEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEecCCCCHHHHHHHHHHH
Confidence 446778999999999889999999999988888886665543
No 45
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=51.84 E-value=11 Score=28.07 Aligned_cols=31 Identities=13% Similarity=-0.031 Sum_probs=26.4
Q ss_pred ceEEEEccCCC--------CcchHHHHhHHhCCCCeeee
Q 029616 3 YRYAMVCSSNQ--------NRSMEAHYLLKRHGFDVSSY 33 (190)
Q Consensus 3 l~~AvVCaSN~--------NRSMEAH~~L~k~Gf~V~Sf 33 (190)
..|-|.|.+.. .+|.-|-..|.+.||+|..+
T Consensus 94 ~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~~v~~L 132 (158)
T 3tg1_B 94 KEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVL 132 (158)
T ss_dssp SCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTCCEEEE
T ss_pred CeEEEEECCCCcccccCcchHHHHHHHHHHhCCCcEEEe
Confidence 36789999886 57999999999999999876
No 46
>2vxe_A CG10686-PA; EDC3, CAR-1, P-bodies, decapping, mRNA decay, LSM proteins, translational repression, transcription; NMR {Drosophila melanogaster}
Probab=49.28 E-value=8.2 Score=28.72 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=25.1
Q ss_pred EEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccC
Q 029616 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF 54 (190)
Q Consensus 6 AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~dkPNvY~F 54 (190)
++.++-|...|+=| |+ +|+||||-.+-. ..+-+....||++
T Consensus 28 GiL~~In~~~sTi~---L~----nVrsfGTEgR~~-~~~ipp~~~vy~y 68 (88)
T 2vxe_A 28 GRLYTVDPQECTIA---LS----SVRSFGTEDRDT-QFQIAPQSQIYDY 68 (88)
T ss_dssp EEEEEEETTTTEEE---EE----EEEECCCTTTCC-SSCCCCCCSCEEE
T ss_pred EEEeeecCcccEEE---EE----eeeEecCcCCCC-CcccCCCCceeeE
Confidence 45666666665432 32 899999987732 2344555567764
No 47
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=48.93 E-value=16 Score=27.36 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=25.0
Q ss_pred eEEEEccCCCCcchHHHHhHH--------hCCC-CeeeecCC
Q 029616 4 RYAMVCSSNQNRSMEAHYLLK--------RHGF-DVSSYGTG 36 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~--------k~Gf-~V~SfGTG 36 (190)
.+.++|.+..+||..|=..|. +.|| +|..+--|
T Consensus 87 ~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG 128 (152)
T 1t3k_A 87 TLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERG 128 (152)
T ss_dssp EEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESST
T ss_pred EEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 578899966889998888774 4899 68776433
No 48
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=45.10 E-value=15 Score=29.35 Aligned_cols=31 Identities=13% Similarity=0.055 Sum_probs=26.1
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
.+-++|.+...||..|-..|++.|| +|..+-
T Consensus 83 ~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~ 114 (271)
T 1e0c_A 83 VYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLN 114 (271)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHTTCCCEEEET
T ss_pred eEEEEcCCCCccHHHHHHHHHHcCCCCeEEec
Confidence 5788898876699999999999999 687653
No 49
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=45.08 E-value=15 Score=27.22 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=17.2
Q ss_pred eEEEE--ccCCCCcchHHHHhHHhC
Q 029616 4 RYAMV--CSSNQNRSMEAHYLLKRH 26 (190)
Q Consensus 4 ~~AvV--CaSN~NRSMEAH~~L~k~ 26 (190)
.+.|| |....+||..|=..|+++
T Consensus 89 ~ivvv~yC~~sg~rs~~aa~~L~~~ 113 (161)
T 1c25_A 89 RVIVVFHCEFSSERGPRMCRYVRER 113 (161)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCcchHHHHHHHHHH
Confidence 34444 885688999999999864
No 50
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=44.33 E-value=15 Score=27.57 Aligned_cols=31 Identities=6% Similarity=0.180 Sum_probs=23.0
Q ss_pred eEEEE--ccCCCCcchHHHHhHHhC----------CC-Ceeeec
Q 029616 4 RYAMV--CSSNQNRSMEAHYLLKRH----------GF-DVSSYG 34 (190)
Q Consensus 4 ~~AvV--CaSN~NRSMEAH~~L~k~----------Gf-~V~SfG 34 (190)
.+.|| |....+||..|=..|+++ || +|..+-
T Consensus 91 ~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~ 134 (175)
T 2a2k_A 91 RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILK 134 (175)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEET
T ss_pred CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEc
Confidence 35566 775578999999988864 88 787763
No 51
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=39.82 E-value=29 Score=27.76 Aligned_cols=47 Identities=6% Similarity=-0.147 Sum_probs=36.6
Q ss_pred cchHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHHHHHHHH
Q 029616 112 EKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC 158 (190)
Q Consensus 112 ERvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~~ileLc 158 (190)
+.-+...||+++++++....++-++-.|-+++..++..+++.+|+|.
T Consensus 20 ~~a~~~Av~~iN~~~~ilg~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 66 (389)
T 4gpa_A 20 YTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQY 66 (389)
T ss_dssp HHHHHHHHHHHHTCSCTTTCSSEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEEEEecCCCchHHHHHHHHHHHH
Confidence 45677889999999888878887777777777778887777777654
No 52
>2fsu_A Protein PHNH; C-P lyase, phosphonate metabolism, structural genomics montreal-kingston bacterial structural genomics initiative; HET: MSE; 1.70A {Escherichia coli} SCOP: c.67.2.1
Probab=38.78 E-value=21 Score=29.86 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=17.9
Q ss_pred CeeeecCCCceecCCCCCCCCccccC
Q 029616 29 DVSSYGTGAHVKLPGPSLREPNVYEF 54 (190)
Q Consensus 29 ~V~SfGTGs~VkLPGps~dkPNvY~F 54 (190)
.|.|+..|..++|=||-|...+...=
T Consensus 142 qv~sL~~g~~l~LsGPGI~~~~~i~~ 167 (210)
T 2fsu_A 142 QVASLSGGRMLRLTGAGIAEERMIAP 167 (210)
T ss_dssp ECSCSSSSCCEEEEC----CCEEECC
T ss_pred EccccCCCCceEEEcCCcCCceeEcC
Confidence 57789999999999999998776553
No 53
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=38.12 E-value=18 Score=28.96 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=26.7
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 36 (190)
.+-++|.+...||..|-..|+..|| +|..+--|
T Consensus 79 ~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG 112 (277)
T 3aay_A 79 TVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGG 112 (277)
T ss_dssp EEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTH
T ss_pred eEEEECCCCCchHHHHHHHHHHcCCCcEEEecCC
Confidence 5788998865578999999999999 78876433
No 54
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=37.30 E-value=18 Score=24.10 Aligned_cols=25 Identities=28% Similarity=0.318 Sum_probs=20.3
Q ss_pred chHHHHhHHhCCCCeeeecCCCceec
Q 029616 16 SMEAHYLLKRHGFDVSSYGTGAHVKL 41 (190)
Q Consensus 16 SMEAH~~L~k~Gf~V~SfGTGs~VkL 41 (190)
+=|.-++|++.||.+.. ++|||.++
T Consensus 7 ~~elik~L~~~G~~~~r-~~GSH~~~ 31 (70)
T 1whz_A 7 PEEVARKLRRLGFVERM-AKGGHRLY 31 (70)
T ss_dssp HHHHHHHHHHTTCEEEE-EETTEEEE
T ss_pred HHHHHHHHHHCCCEEeC-CCCCCceE
Confidence 45888999999998665 47898876
No 55
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=35.74 E-value=36 Score=27.55 Aligned_cols=32 Identities=9% Similarity=0.220 Sum_probs=22.6
Q ss_pred CceEEEEccCCCCcc------hHHHHhHHhCCCCeeee
Q 029616 2 KYRYAMVCSSNQNRS------MEAHYLLKRHGFDVSSY 33 (190)
Q Consensus 2 ~l~~AvVCaSN~NRS------MEAH~~L~k~Gf~V~Sf 33 (190)
+++|||.|+|+.+.+ -|.=+.|.++|+.|.+=
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~G 50 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWG 50 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEEC
Confidence 468999999884433 22235788999988764
No 56
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=35.20 E-value=31 Score=28.33 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=22.9
Q ss_pred ceEEEEccCCCCcc-------hHHHHhHHhCCCCeeeec
Q 029616 3 YRYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRS-------MEAH~~L~k~Gf~V~SfG 34 (190)
.+|||+|+|+.... -|.=+.|.++|+.|.|=|
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGG 76 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGG 76 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 57999999998641 233356778899888733
No 57
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=34.73 E-value=32 Score=30.91 Aligned_cols=63 Identities=16% Similarity=0.098 Sum_probs=39.9
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeecC-CC----ceecCCCCCCCCccccCC-CCHHHHHHHHhhc
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGT-GA----HVKLPGPSLREPNVYEFG-TPYKQMFDDLRRK 68 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGT-Gs----~VkLPGps~dkPNvY~Fg-T~Y~~Iy~dL~~k 68 (190)
..+-++|.+. +||..|=..|++.||+|..+-- |- .-.+|-.+. |..-... .+.+++.+-|...
T Consensus 323 ~~ivv~c~~g-~rs~~aa~~L~~~G~~v~~l~G~G~~~w~~~g~p~~~~--~~~~~~~~i~~~~l~~~l~~~ 391 (539)
T 1yt8_A 323 ARLVLVDDDG-VRANMSASWLAQMGWQVAVLDGLSEADFSERGAWSAPL--PRQPRADTIDPTTLADWLGEP 391 (539)
T ss_dssp CEEEEECSSS-SHHHHHHHHHHHTTCEEEEECSCCGGGCCBCSSCCCCC--CCCCCCCEECHHHHHHHTTST
T ss_pred CeEEEEeCCC-CcHHHHHHHHHHcCCeEEEecCCChHHHHHhhccccCC--CCCCcCCccCHHHHHHHhcCC
Confidence 3678899864 8999999999999999988743 42 122332221 2211222 4777877766544
No 58
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=33.38 E-value=29 Score=25.80 Aligned_cols=29 Identities=21% Similarity=0.362 Sum_probs=20.9
Q ss_pred EEEE-ccCCCCcchHHH----HhHHhCCC---Ceeee
Q 029616 5 YAMV-CSSNQNRSMEAH----YLLKRHGF---DVSSY 33 (190)
Q Consensus 5 ~AvV-CaSN~NRSMEAH----~~L~k~Gf---~V~Sf 33 (190)
+-|+ |....+||..|= ..|++.|| +|..+
T Consensus 70 ~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L 106 (152)
T 2j6p_A 70 LAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVL 106 (152)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred EEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 3444 966678998886 67888998 56655
No 59
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=33.12 E-value=41 Score=27.41 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=21.8
Q ss_pred ceEEEEccCCCCcc------hHHHHhHHhCCCCeeee
Q 029616 3 YRYAMVCSSNQNRS------MEAHYLLKRHGFDVSSY 33 (190)
Q Consensus 3 l~~AvVCaSN~NRS------MEAH~~L~k~Gf~V~Sf 33 (190)
.+|||+|+|+.+.+ -|.=+.|.++|+.|.+=
T Consensus 23 ~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~G 59 (199)
T 3qua_A 23 WAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSG 59 (199)
T ss_dssp CEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 68999999884332 22235678999998763
No 60
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=32.21 E-value=34 Score=26.77 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=22.8
Q ss_pred eEEEEccCCCCcc-------hHHHHhHHhCCCCeeeec
Q 029616 4 RYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NRS-------MEAH~~L~k~Gf~V~SfG 34 (190)
+|||+|+|+...+ -+.=+.|.++|+.|.|=|
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Gg 40 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGG 40 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECC
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 6999999997542 233456789999998754
No 61
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=31.98 E-value=59 Score=23.20 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=24.6
Q ss_pred ceEEEEccCCCCcchHHHHh---HHhCCCC--eeeecCC
Q 029616 3 YRYAMVCSSNQNRSMEAHYL---LKRHGFD--VSSYGTG 36 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~---L~k~Gf~--V~SfGTG 36 (190)
+|+.+||++-+.-||=+-++ +++.|++ |..++.+
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~ 43 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAET 43 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECST
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHH
Confidence 67999999999999877644 5577875 4444433
No 62
>2ko6_A Uncharacterized protein YIHD; alpha protein, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri}
Probab=31.80 E-value=29 Score=25.86 Aligned_cols=25 Identities=28% Similarity=0.295 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhhhh--------HHHHHhhhhcc
Q 029616 154 TFDLCQEVCLLLFF--------IVSLVYHLKHH 178 (190)
Q Consensus 154 ileLc~~l~~~~~~--------~~~~~~~~~~~ 178 (190)
.+++-|.|.+-..| |++|.||+|..
T Consensus 25 L~q~Lqkla~Eagf~g~l~~LtDdvlIYhLKMr 57 (89)
T 2ko6_A 25 LLQFLQKLAKESGFDGELADLTDDILIYHLKMR 57 (89)
T ss_dssp HHHHHHHHHHHTTCSSCTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCchhhcccceeeeeeeec
Confidence 45566666555444 99999999864
No 63
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=31.56 E-value=45 Score=26.59 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=22.4
Q ss_pred eEEEEccCCCCcc-------hHHHHhHHhCCCCeeeec
Q 029616 4 RYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NRS-------MEAH~~L~k~Gf~V~SfG 34 (190)
+|||+|+|+...+ -|.=+.|.++|+.|.|=|
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 6999999996332 223356789999998754
No 64
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=30.74 E-value=25 Score=24.39 Aligned_cols=29 Identities=21% Similarity=0.217 Sum_probs=23.5
Q ss_pred eEEEEccCCCCcchHHHHhHHhC------CC-Ceeee
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRH------GF-DVSSY 33 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~------Gf-~V~Sf 33 (190)
.+.++|.+ .+||..|-..|++. || +|..+
T Consensus 74 ~ivv~C~~-G~rs~~a~~~L~~~gg~~~~G~~~v~~l 109 (127)
T 3i2v_A 74 PIYVICKL-GNDSQKAVKILQSLSAAQELDPLTVRDV 109 (127)
T ss_dssp EEEEECSS-SSHHHHHHHHHHHHHHTTSSSCEEEEEE
T ss_pred eEEEEcCC-CCcHHHHHHHHHHhhccccCCCceEEEe
Confidence 68899987 47999999999998 34 66665
No 65
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=30.68 E-value=94 Score=24.83 Aligned_cols=41 Identities=12% Similarity=-0.049 Sum_probs=32.2
Q ss_pred chHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHHH
Q 029616 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRL 153 (190)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~~ 153 (190)
+-+...+++++.+++-.++++.++-.|.+.+++.|...+..
T Consensus 27 ~g~~~a~~~~N~~ggi~G~~i~l~~~D~~~~~~~~~~~~~~ 67 (364)
T 3lop_A 27 AGARLYFDWLNLNGGINGETIRLVARDDEQKIEQTVRNVRD 67 (364)
T ss_dssp HHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcCCeEEEEEEeCCCCCHHHHHHHHHH
Confidence 34567788999998888999999999998888777544433
No 66
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=30.07 E-value=33 Score=26.81 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=26.8
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029616 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (190)
Q Consensus 4 ~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 36 (190)
.+-++|.+...||..|-..|+ .|| +|..+--|
T Consensus 63 ~ivvyc~~g~~~s~~a~~~L~-~G~~~v~~l~GG 95 (230)
T 2eg4_A 63 PVVLYDEGLTSRLCRTAFFLG-LGGLEVQLWTEG 95 (230)
T ss_dssp SEEEECSSSCHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred EEEEEcCCCCccHHHHHHHHH-cCCceEEEeCCC
Confidence 577889887679999999999 999 59877656
No 67
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=29.91 E-value=84 Score=25.44 Aligned_cols=40 Identities=8% Similarity=-0.150 Sum_probs=31.7
Q ss_pred chHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHH
Q 029616 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGR 152 (190)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~ 152 (190)
+-+...+++++.+++-.++++.++-.|.+.+++.|...+.
T Consensus 29 ~g~~~a~~~iN~~ggi~G~~i~l~~~D~~~~~~~~~~~~~ 68 (392)
T 3lkb_A 29 AAVEDYCKWANERKLVPGVVFNCVVRDDQYNNANTQRFFE 68 (392)
T ss_dssp HHHHHHHHHHHHHTSSTTEEEEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcCCeEeEEEEecCCCCHHHHHHHHH
Confidence 4567778999999888889999999998888877654443
No 68
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=29.17 E-value=26 Score=29.54 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=25.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeee
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSY 33 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 33 (190)
.++.+.|.+ .+||..|=..|++.|| +|..+
T Consensus 182 k~IVvyC~~-G~RS~~Aa~~L~~~Gf~nV~~L 212 (265)
T 4f67_A 182 KKIAMFCTG-GIRCEKTTAYMKELGFEHVYQL 212 (265)
T ss_dssp SCEEEECSS-SHHHHHHHHHHHHHTCSSEEEE
T ss_pred CeEEEEeCC-ChHHHHHHHHHHHcCCCCEEEe
Confidence 468999986 6799999999999999 67776
No 69
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=29.09 E-value=1.1e+02 Score=24.26 Aligned_cols=43 Identities=7% Similarity=-0.022 Sum_probs=32.2
Q ss_pred chHHHHHHHHhcCCCCCCCeEEEEEeeccCCHHHHHhhHHHHH
Q 029616 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTF 155 (190)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHVINvDIkDnhEeA~~Ga~~il 155 (190)
+-+...+++++.+++-.++++.++-.|.+.+++.|...+..++
T Consensus 24 ~g~~~a~~~iN~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~ 66 (356)
T 3ipc_A 24 KGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQGISVANKFV 66 (356)
T ss_dssp HHHHHHHHHHHHTTCBTTBCEEEEEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence 3456678899998887889999998898888877655444433
No 70
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=29.00 E-value=1e+02 Score=24.91 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=32.4
Q ss_pred cchHHHHHHHHhcCCCCCC-CeEEEEEeeccCCHHHHHhhHHH
Q 029616 112 EKVFDTVVEDLNTREQPFM-KTVLVINLEVKDNHEEAAIGGRL 153 (190)
Q Consensus 112 ERvfD~Vvedl~~R~~~~~-~pVHVINvDIkDnhEeA~~Ga~~ 153 (190)
.+-+...+++++.+++-.. +++.++-.|.+.+.+.|...+..
T Consensus 25 ~~g~~~a~~~iN~~ggi~Gg~~i~l~~~D~~~~~~~~~~~~~~ 67 (387)
T 3i45_A 25 RNGWQLAVEQINAAGGLLGGRPLEVISRDDGGDPGKAVTAAQE 67 (387)
T ss_dssp HHHHHHHHHHHHHTTCBTTTBCEEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcceEEEEecCCCCHHHHHHHHHH
Confidence 3456778899999988777 89999988988887777554443
No 71
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=27.98 E-value=1.1e+02 Score=25.09 Aligned_cols=42 Identities=2% Similarity=0.101 Sum_probs=32.1
Q ss_pred cchHHHHHHHHhcCCCCCCCeEEEEEeecc-CCHHHHHhhHHH
Q 029616 112 EKVFDTVVEDLNTREQPFMKTVLVINLEVK-DNHEEAAIGGRL 153 (190)
Q Consensus 112 ERvfD~Vvedl~~R~~~~~~pVHVINvDIk-DnhEeA~~Ga~~ 153 (190)
.+-+...+|+++.+++-.++++-++-.|.+ .+.+.|...+..
T Consensus 35 ~~g~~lA~~~iN~~ggi~G~~i~l~~~D~~~~~~~~a~~~a~~ 77 (419)
T 3h5l_A 35 QRGIQMAADEINAVGGILGRPIELVFADTQSKGVDVVIQSAQR 77 (419)
T ss_dssp HHHHHHHHHHHHTTTSBTTBCEEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcCceEEEEEEccCCCCCHHHHHHHHHH
Confidence 345677899999998888899999999987 477766554443
No 72
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=27.77 E-value=56 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=24.6
Q ss_pred eEEEEccCCCCc-chHHHHhHHhCCC-Ceeee
Q 029616 4 RYAMVCSSNQNR-SMEAHYLLKRHGF-DVSSY 33 (190)
Q Consensus 4 ~~AvVCaSN~NR-SMEAH~~L~k~Gf-~V~Sf 33 (190)
.+-|.|.+. +| |..|-..|+..|| +|..+
T Consensus 88 ~ivvyc~~g-~~~a~~a~~~L~~~G~~~v~~l 118 (280)
T 1urh_A 88 HLIVYDEGN-LFSAPRAWWMLRTFGVEKVSIL 118 (280)
T ss_dssp EEEEECSSS-CSSHHHHHHHHHHTTCSCEEEE
T ss_pred eEEEECCCC-CccHHHHHHHHHHcCCCCEEEe
Confidence 578889885 56 9999999999999 78776
No 73
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=27.42 E-value=48 Score=23.14 Aligned_cols=29 Identities=14% Similarity=0.027 Sum_probs=22.1
Q ss_pred eEEEEccCCCCcc---------hHHHHhHHhCCCCeeee
Q 029616 4 RYAMVCSSNQNRS---------MEAHYLLKRHGFDVSSY 33 (190)
Q Consensus 4 ~~AvVCaSN~NRS---------MEAH~~L~k~Gf~V~Sf 33 (190)
.+-+.|.+.. || ..+-..|.+.||+|..+
T Consensus 85 ~ivvyc~~g~-~~~~~~~~~~~~~~~~~L~~~G~~v~~l 122 (142)
T 2ouc_A 85 EIIVYDENTN-EPSRVMPSQPLHIVLESLKREGKEPLVL 122 (142)
T ss_dssp CEEEECSSCC-CGGGCCTTSHHHHHHHHHHHTTCCCEEE
T ss_pred cEEEEECCCC-chhhcCcccHHHHHHHHHHHcCCcEEEE
Confidence 5788898865 43 45777889999988766
No 74
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=26.92 E-value=34 Score=27.24 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=24.2
Q ss_pred CceEEEEccCCCCcc-------hHHHHhHHhCCCCeeeecC
Q 029616 2 KYRYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYGT 35 (190)
Q Consensus 2 ~l~~AvVCaSN~NRS-------MEAH~~L~k~Gf~V~SfGT 35 (190)
+.+|||+||++...| -|.=+.|.++|+.|.|=|.
T Consensus 13 ~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg 53 (176)
T 2iz6_A 13 KPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGR 53 (176)
T ss_dssp CCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 468999999993333 2223467899999998665
No 75
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=25.98 E-value=42 Score=29.04 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=26.9
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 36 (190)
..+.+.|.|. +||..|=..|...|| +|..|--|
T Consensus 359 ~~ivvyC~sG-~rs~~aa~~L~~~G~~~v~~~~GG 392 (423)
T 2wlr_A 359 QQVSFYCGTG-WRASETFMYARAMGWKNVSVYDGG 392 (423)
T ss_dssp SEEEEECSSS-HHHHHHHHHHHHTTCSSEEEESSH
T ss_pred CcEEEECCcH-HHHHHHHHHHHHcCCCCcceeCcc
Confidence 3578999875 689999899999999 79888433
No 76
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=25.11 E-value=96 Score=22.38 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=25.3
Q ss_pred CceEEEEccCCCCcchHH----HHhHHhCCCC--eeeecCCC
Q 029616 2 KYRYAMVCSSNQNRSMEA----HYLLKRHGFD--VSSYGTGA 37 (190)
Q Consensus 2 ~l~~AvVCaSN~NRSMEA----H~~L~k~Gf~--V~SfGTGs 37 (190)
.+|+.+||++-+.-|+=+ -+.+++.|+. |..++.+.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~ 62 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNE 62 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHH
Confidence 358999999999998632 3456788986 45554443
No 77
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=24.97 E-value=35 Score=26.89 Aligned_cols=30 Identities=10% Similarity=0.297 Sum_probs=22.5
Q ss_pred eEEEE--ccCCCCcchHHHHhHHh----------CCC-Ceeee
Q 029616 4 RYAMV--CSSNQNRSMEAHYLLKR----------HGF-DVSSY 33 (190)
Q Consensus 4 ~~AvV--CaSN~NRSMEAH~~L~k----------~Gf-~V~Sf 33 (190)
.+.|| |....+||..|=..|++ .|| +|..+
T Consensus 111 ~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L 153 (211)
T 1qb0_A 111 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYIL 153 (211)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEE
T ss_pred CeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEE
Confidence 35455 88557899999888886 699 78776
No 78
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=24.71 E-value=23 Score=28.48 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=26.0
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..+.++|.+..-||..|-..|++.|| +|..+-
T Consensus 80 ~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~ 112 (285)
T 1uar_A 80 TTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMN 112 (285)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHTTCSCEEEET
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCCeEEec
Confidence 35788998865479999999999999 688764
No 79
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=24.60 E-value=47 Score=25.46 Aligned_cols=23 Identities=30% Similarity=0.366 Sum_probs=18.5
Q ss_pred ceEEEEccCCCCcchHHHHhHHh
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKR 25 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k 25 (190)
..|.|+|.|.++||..|=..|.+
T Consensus 105 ~~IVvyC~sG~~Rs~~aa~~l~~ 127 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSAAMLLLR 127 (169)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCcHHHHHHHHHH
Confidence 36889999999999887766654
No 80
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=24.49 E-value=46 Score=23.89 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=22.4
Q ss_pred ceEEEEccCCCCcchHHH----HhHHhCCCC
Q 029616 3 YRYAMVCSSNQNRSMEAH----YLLKRHGFD 29 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH----~~L~k~Gf~ 29 (190)
.|+.+||++-+--|+=+- +.+++.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 579999999999997666 667788886
No 81
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=23.76 E-value=48 Score=26.86 Aligned_cols=67 Identities=18% Similarity=0.322 Sum_probs=39.7
Q ss_pred EEEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhhhhc
Q 029616 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKR 84 (190)
Q Consensus 5 ~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY~~NGlL~MLdR 84 (190)
|.+.|....+||..|-.+|++.|.... ++| ..--||||...=.|.. ..++-+++.+-.+-.+|++-
T Consensus 127 VVvyC~~SG~Rs~~aa~~L~~~~~~~~--------~y~--~lGf~~V~~L~GG~~a----W~~~~~~lcep~~y~pm~~~ 192 (216)
T 3op3_A 127 IVFHCEFSSERGPRMCRCLREEDRSLN--------QYP--ALYYPELYILKGGYRD----FFPEYMELCEPQSYCPMHHQ 192 (216)
T ss_dssp EEEECCC--CCHHHHHHHHHHHHHHTS--------STT--CCSCCCEEEETTHHHH----HTTTCGGGEESSCBCCCCCS
T ss_pred EEEEeCCCChHHHHHHHHHHHcCcccc--------ccc--ccCCCcEEEECCcHHH----HHHhCcccccCCCCCCCCCH
Confidence 888999888999999999998742211 112 1123455555434433 33445566666677888775
Q ss_pred c
Q 029616 85 N 85 (190)
Q Consensus 85 N 85 (190)
+
T Consensus 193 ~ 193 (216)
T 3op3_A 193 D 193 (216)
T ss_dssp S
T ss_pred H
Confidence 5
No 82
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=22.74 E-value=80 Score=25.75 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=21.9
Q ss_pred eEEEEccCCCCcc---hH-H---HHhHHhCCCCeeeec
Q 029616 4 RYAMVCSSNQNRS---ME-A---HYLLKRHGFDVSSYG 34 (190)
Q Consensus 4 ~~AvVCaSN~NRS---ME-A---H~~L~k~Gf~V~SfG 34 (190)
+|||+|.|..... .+ | =+.|.++|+.|.|=|
T Consensus 15 ~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGG 52 (215)
T 2a33_A 15 RICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGG 52 (215)
T ss_dssp EEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECC
Confidence 6999999987543 11 2 244789999998744
No 83
>2rp5_A Putative uncharacterized protein CEP-1; oligomerization domain, SAM domain, transcription; NMR {Caenorhabditis elegans}
Probab=22.47 E-value=28 Score=27.59 Aligned_cols=19 Identities=32% Similarity=0.371 Sum_probs=16.3
Q ss_pred cChHHHHhcCchhhhhccc
Q 029616 68 KDPELYKRNGILPMLKRNI 86 (190)
Q Consensus 68 kD~~lY~~NGlL~MLdRNr 86 (190)
.|..+|++|||..|+|=.+
T Consensus 78 ~d~d~Fr~~Gi~TM~Dl~k 96 (136)
T 2rp5_A 78 HDSVLFNANGIYTMGDMIR 96 (136)
T ss_dssp TTHHHHHHHTCCSTTHHHH
T ss_pred chHHHHHHccceeHHHHHH
Confidence 5788999999999998654
No 84
>2p7n_A Pathogenicity island 1 effector protein; CVR69, structural genomics, PSI-2, protein structure initiative; 2.80A {Chromobacterium violaceum}
Probab=22.28 E-value=50 Score=30.47 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=40.8
Q ss_pred CcchHHHHhHHhCC--------CCeeeecCCCceecCCCCCCCCccccCC-CCHHHHHHHHhhcChHHHHhcCchhhhhc
Q 029616 14 NRSMEAHYLLKRHG--------FDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQMFDDLRRKDPELYKRNGILPMLKR 84 (190)
Q Consensus 14 NRSMEAH~~L~k~G--------f~V~SfGTGs~VkLPGps~dkPNvY~Fg-T~Y~~Iy~dL~~kD~~lY~~NGlL~MLdR 84 (190)
+..+||-.++++-| |.|.....|....+ .|+ +||++|+++|..+- .
T Consensus 278 ~s~~ea~~W~kkLgL~~~p~~gF~V~~k~~gG~i~I-----------~~Dlspi~~m~~sl~g~g------d-------- 332 (407)
T 2p7n_A 278 GSESDARKWAKEMGLPDAPPPGFSCVQKAADGNWVV-----------VVDMTPIDTMIRDVGALG------S-------- 332 (407)
T ss_dssp BCHHHHHHHHHHTTCCCCCTTSCCSEEECTTSSEEE-----------ECCCHHHHHHHHHHHHTC------C--------
T ss_pred CcHHHHHHHHHHhCCCcCCCCCeeEEEecCCCceEE-----------EeChHHHHHHHhcccCCC------C--------
Confidence 34588888888888 66654443333222 234 79999999987553 1
Q ss_pred ccCCCCCccccccccC
Q 029616 85 NIGVKAAPQRWQDNAL 100 (190)
Q Consensus 85 Nr~IK~~PERfQ~~~~ 100 (190)
+..+..-..+||.|..
T Consensus 333 g~~~ei~tAsyQAWqA 348 (407)
T 2p7n_A 333 GTELELDNAKFQAWQS 348 (407)
T ss_dssp CC-CCCCTTTHHHHHH
T ss_pred CCcccccHHHHHHHHH
Confidence 2356678889999864
No 85
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=21.89 E-value=46 Score=27.78 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=24.6
Q ss_pred ceEEEEccCCCCcchHHHHhHHh-CCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKR-HGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k-~Gf-~V~SfG 34 (190)
..+.+.|.|- +||..|=..|.+ .|| +|..|-
T Consensus 260 ~~ivvyC~sG-~rs~~a~~~L~~~~G~~~v~~~~ 292 (318)
T 3hzu_A 260 DQTVVYCRIG-ERSSHTWFVLTHLLGKADVRNYD 292 (318)
T ss_dssp CCCEEECSSS-HHHHHHHHHHHHTSCCSSCEECT
T ss_pred CcEEEEcCCh-HHHHHHHHHHHHHcCCCCeeEeC
Confidence 3578999875 799999999987 999 477763
No 86
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=21.77 E-value=49 Score=27.63 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=26.9
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029616 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (190)
Q Consensus 3 l~~AvVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 34 (190)
..|-|.|.+..-||..|-..|+..|| +|..+-
T Consensus 112 ~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~ 144 (318)
T 3hzu_A 112 DTVVIYGDKSNWWAAYALWVFTLFGHADVRLLN 144 (318)
T ss_dssp CEEEEECSGGGHHHHHHHHHHHHTTCSCEEEET
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCceEEcc
Confidence 36889999877689999999999999 587763
No 87
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=21.40 E-value=1.4e+02 Score=20.34 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=39.2
Q ss_pred eEEEEccCC---CCcchHHHHhHH---hC-CC-CeeeecCCCceec--CCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029616 4 RYAMVCSSN---QNRSMEAHYLLK---RH-GF-DVSSYGTGAHVKL--PGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (190)
Q Consensus 4 ~~AvVCaSN---~NRSMEAH~~L~---k~-Gf-~V~SfGTGs~VkL--PGps~dkPNvY~FgT~Y~~Iy~dL~~kD~~lY 73 (190)
|++++.++. ..++.+|=.+.. +. |. .|.=|=+|.-|.+ +|..+ |.. -++.+.++.|..++-++|
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~~~~~~--~~~----~~~~~~l~~l~~~gv~v~ 76 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKP--GEG----YNIQQMLEILTAQNVPVK 76 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCC--SSS----CCHHHHHHHHHHTTCCEE
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHhcCCCC--CcC----CCHHHHHHHHHHCCCEEE
Confidence 688888886 455555433332 34 88 7766666666665 44322 221 468888888877765554
No 88
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=20.71 E-value=1e+02 Score=24.48 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=26.5
Q ss_pred CCceEEEEccCCCCcchHHHHhHHhCCCCeeeecCC
Q 029616 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTG 36 (190)
Q Consensus 1 ~~l~~AvVCaSN~NRSMEAH~~L~k~Gf~V~SfGTG 36 (190)
|+++++|+++. -....-+.+++.|++|.-+...
T Consensus 1 m~m~Ililg~g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 1 MKVRIATYASH---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CCSEEEEESST---THHHHHHHHHHTTCCEEEESCG
T ss_pred CceEEEEECCh---hHHHHHHHHHhCCCEEEEEECC
Confidence 68899999997 3456677788999999877655
No 89
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=20.48 E-value=1.3e+02 Score=24.51 Aligned_cols=42 Identities=12% Similarity=-0.159 Sum_probs=32.4
Q ss_pred chHHHHHHHHhcCCCC--CCC--eEEEEEeeccCCHHHHHhhHHHH
Q 029616 113 KVFDTVVEDLNTREQP--FMK--TVLVINLEVKDNHEEAAIGGRLT 154 (190)
Q Consensus 113 RvfD~Vvedl~~R~~~--~~~--pVHVINvDIkDnhEeA~~Ga~~i 154 (190)
+-+...+++++.+++- .++ ++.++-.|.+.+++.|...+..+
T Consensus 26 ~g~~~a~~~iN~~ggi~~~G~~~~l~l~~~D~~~~~~~a~~~~~~l 71 (391)
T 3eaf_A 26 LGAELAFKYFNEKGIYTKDGVRVNINYIKRDYAYNPTTAEEYYREF 71 (391)
T ss_dssp HHHHHHHHHHHHHCEECTTCCEEEEEEEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccCCeEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 4467788999998877 788 99999999998888776554443
No 90
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.25 E-value=1e+02 Score=25.16 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=22.8
Q ss_pred eEEEEccCCCCc-c------hHHHHhHHhCCCCeeeecC
Q 029616 4 RYAMVCSSNQNR-S------MEAHYLLKRHGFDVSSYGT 35 (190)
Q Consensus 4 ~~AvVCaSN~NR-S------MEAH~~L~k~Gf~V~SfGT 35 (190)
+|||+|+|+... + -|.=+.|.++|+.|.+=|.
T Consensus 11 ~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 11 KICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp EEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred eEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 699999887643 2 2333677899999876544
Done!