Query 029617
Match_columns 190
No_of_seqs 208 out of 1185
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 02:11:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1c_A Histidine triad nucleot 100.0 5E-40 1.7E-44 251.4 10.1 124 61-190 3-126 (126)
2 3oj7_A Putative histidine tria 100.0 1.7E-36 5.8E-41 228.5 11.0 113 74-189 3-116 (117)
3 3n1s_A HIT-like protein HINT; 100.0 2.6E-36 9.1E-41 228.8 10.6 112 76-189 2-114 (119)
4 1xqu_A HIT family hydrolase; p 100.0 1.6E-34 5.3E-39 227.3 11.0 113 75-189 33-146 (147)
5 4egu_A Histidine triad (HIT) p 100.0 1.5E-34 5.1E-39 218.2 10.2 111 76-188 3-114 (119)
6 3ksv_A Uncharacterized protein 100.0 1.2E-31 4E-36 211.0 10.6 104 76-184 10-116 (149)
7 3o0m_A HIT family protein; ssg 100.0 2.8E-31 9.6E-36 208.1 9.6 107 76-184 4-111 (149)
8 3imi_A HIT family protein; str 100.0 2.2E-31 7.4E-36 208.3 8.4 107 75-184 7-114 (147)
9 3lb5_A HIT-like protein involv 100.0 1.6E-30 5.4E-35 207.0 9.7 104 75-184 26-133 (161)
10 3l7x_A SMU.412C, putative HIT- 100.0 1.4E-30 4.7E-35 209.8 9.2 107 75-184 34-141 (173)
11 1y23_A HIT, histidine triad pr 100.0 2.7E-30 9.2E-35 200.6 7.1 106 76-184 4-110 (145)
12 3r6f_A HIT family protein; str 100.0 3.1E-30 1.1E-34 199.1 7.4 102 73-184 2-103 (135)
13 2eo4_A 150AA long hypothetical 100.0 1.2E-29 4.1E-34 198.3 10.0 104 79-184 1-104 (149)
14 3p0t_A Uncharacterized protein 100.0 2E-28 6.9E-33 189.1 8.9 101 77-185 5-106 (138)
15 3ano_A AP-4-A phosphorylase; d 99.9 3.3E-28 1.1E-32 202.6 9.6 109 75-185 67-177 (218)
16 1fit_A FragIle histidine prote 99.9 1.1E-25 3.9E-30 175.3 11.0 105 80-188 4-108 (147)
17 1z84_A Galactose-1-phosphate u 99.9 1.7E-25 5.8E-30 197.5 11.0 116 60-184 200-320 (351)
18 2oik_A Histidine triad (HIT) p 99.9 3.3E-25 1.1E-29 174.1 10.8 103 75-188 8-112 (154)
19 1gup_A Galactose-1-phosphate u 99.9 2.8E-25 9.4E-30 195.7 10.7 126 60-190 180-315 (348)
20 1ems_A Nitfhit, NIT-fragIle hi 99.9 1.4E-24 4.6E-29 194.8 11.2 104 76-187 296-403 (440)
21 3ohe_A Histidine triad (HIT) p 99.8 3.5E-19 1.2E-23 138.1 11.0 91 90-188 12-105 (137)
22 3i24_A HIT family hydrolase; s 99.8 7.2E-19 2.5E-23 138.3 9.7 91 90-188 12-105 (149)
23 3nrd_A Histidine triad (HIT) p 99.7 3.6E-17 1.2E-21 126.3 10.5 90 90-188 14-107 (135)
24 3sp4_A Aprataxin-like protein; 99.7 1E-17 3.4E-22 137.9 3.9 91 93-183 23-126 (204)
25 3i4s_A Histidine triad protein 99.7 5.9E-16 2E-20 121.6 10.5 86 91-188 18-110 (149)
26 3bl9_A Scavenger mRNA-decappin 99.2 1.3E-10 4.4E-15 100.4 10.3 96 83-183 142-248 (301)
27 1vlr_A MRNA decapping enzyme; 99.1 2.3E-10 7.9E-15 100.3 9.8 96 83-183 189-295 (350)
28 1z84_A Galactose-1-phosphate u 98.4 1.4E-06 4.8E-11 76.5 9.5 101 76-181 60-191 (351)
29 2pof_A CDP-diacylglycerol pyro 96.7 0.0022 7.5E-08 53.2 5.9 83 94-180 34-120 (227)
30 1gup_A Galactose-1-phosphate u 94.9 0.038 1.3E-06 48.0 5.9 64 113-181 107-171 (348)
31 3vg8_G Hypothetical protein TT 72.7 3.4 0.00012 30.3 3.6 25 155-180 76-100 (116)
32 1ts9_A Ribonuclease P protein 24.2 73 0.0025 22.6 3.5 26 91-121 35-60 (102)
33 3hfn_A ASL2047 protein; HFQ, S 20.3 1E+02 0.0035 20.6 3.4 35 83-121 29-64 (72)
No 1
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=100.00 E-value=5e-40 Score=251.40 Aligned_cols=124 Identities=52% Similarity=0.915 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHhcCCCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHH
Q 029617 61 DEEAAAKAAALNAGSEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGH 140 (190)
Q Consensus 61 ~e~~~a~~~~~~~~~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ 140 (190)
+|+.+|+++ + .+++|+||+|+++|++.++|||||+++||.|++|.+|||+|||||+| +.++.++++++.+++++
T Consensus 3 ~~~~~~~~~---~-~~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~ 76 (126)
T 3o1c_A 3 DEIAKAQVA---R-PGGDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKH--ISQISAAEDADESLLGH 76 (126)
T ss_dssp ------------C-TTCSSHHHHHHHTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCCGGGCCGGGHHHHHH
T ss_pred chhhccccc---C-CCCCCCcchhhcCCCcCCEEEECCCEEEEECCCCCCCceEEEEechH--hchHhhCchhHHHHHHH
Confidence 577777777 3 58899999999999999999999999999999999999999999999 67777777788889999
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEecCCCCCCccceEEEEEEcCCCCCCCCC
Q 029617 141 LLCASKIVAEKEGILDGFRVVINNGPGACQSVYHLHLHVLGGRQLKWPPG 190 (190)
Q Consensus 141 ll~~ak~v~~~~~~~~gyni~in~G~~agqsV~HlHlHVIPR~~~~wp~~ 190 (190)
++..+++++++++.++|||+++|+|+.+||+|+|+|+|||||++|+||||
T Consensus 77 l~~~~~~~~~~~~~~~g~ni~~n~g~~agq~v~HlH~Hiipr~~~~~~~~ 126 (126)
T 3o1c_A 77 LMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126 (126)
T ss_dssp HHHHHHHHHHHTTCTTCEEEECCCHHHHTCCSSSCCEEEEESSCCCSSCC
T ss_pred HHHHHHHHHHHhCCCCCeEEEEecCCccCCccCEeEEEEeCCcccCCCCC
Confidence 99999999999887789999999999999999999999999999999998
No 2
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=100.00 E-value=1.7e-36 Score=228.51 Aligned_cols=113 Identities=44% Similarity=0.820 Sum_probs=100.0
Q ss_pred CCCCC-ceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHh
Q 029617 74 GSEAP-TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKE 152 (190)
Q Consensus 74 ~~~~~-CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~ 152 (190)
+.+.+ |+||+|+++|.+.++|||||+++||.|++|.+|||+|||||+| +.++.+++++|.+++++++..+++++++
T Consensus 3 ~~m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~l~~~~~~~~~~- 79 (117)
T 3oj7_A 3 GSMADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQH--IASLNEITEENEAFIGKVLYKVSLIGKK- 79 (117)
T ss_dssp ------CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCSGGGCCTTTHHHHHHHHHHHHHHHHH-
T ss_pred cccCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechH--hCCHHHCCHHHHHHHHHHHHHHHHHHHh-
Confidence 45566 9999999999999999999999999999999999999999999 6677777777888999999989999887
Q ss_pred CCCCCeEEEEecCCCCCCccceEEEEEEcCCCCCCCC
Q 029617 153 GILDGFRVVINNGPGACQSVYHLHLHVLGGRQLKWPP 189 (190)
Q Consensus 153 ~~~~gyni~in~G~~agqsV~HlHlHVIPR~~~~wp~ 189 (190)
+..+|||+++|+|+.+||+|+|+|+|||||++|+||+
T Consensus 80 ~~~~g~ni~~n~g~~agq~v~H~H~Hiipr~~~~~~~ 116 (117)
T 3oj7_A 80 ECPEGYRVVNNIGEDAGQTVKHIHFHILGGKKLAWDK 116 (117)
T ss_dssp HCTTCEEEECCCSTTTTCCSSSCCEEEEESSCCCCCC
T ss_pred cCCCCeEEEEcCCCCCCeeeeEEEEEEeCCCCCCCCC
Confidence 3346999999999999999999999999999999996
No 3
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=100.00 E-value=2.6e-36 Score=228.81 Aligned_cols=112 Identities=48% Similarity=0.827 Sum_probs=103.5
Q ss_pred CCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCC-
Q 029617 76 EAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGI- 154 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~- 154 (190)
+++|+||+|++||+|+++|||||+++||.|++|.+|||+|||||+| +.++.+++++|..++++++..+++++++.+.
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~H--v~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~ 79 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIA 79 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhH--hCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999999999999999 7777777778888999999999999988543
Q ss_pred CCCeEEEEecCCCCCCccceEEEEEEcCCCCCCCC
Q 029617 155 LDGFRVVINNGPGACQSVYHLHLHVLGGRQLKWPP 189 (190)
Q Consensus 155 ~~gyni~in~G~~agqsV~HlHlHVIPR~~~~wp~ 189 (190)
++|||+++|+|+.+||+|+|+|+|||||++++|+.
T Consensus 80 ~~g~ni~~n~g~~agq~V~HlH~Hiipr~~~~~~~ 114 (119)
T 3n1s_A 80 EDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPML 114 (119)
T ss_dssp TTCEEEEEEEHHHHTCCSSSCCEEEEESSCCCCSS
T ss_pred CCCeEEEEeCCCCcCCCcCEEEEEEeCCcccCccc
Confidence 68999999999999999999999999999999875
No 4
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=100.00 E-value=1.6e-34 Score=227.26 Aligned_cols=113 Identities=44% Similarity=0.703 Sum_probs=104.0
Q ss_pred CCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCC
Q 029617 75 SEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGI 154 (190)
Q Consensus 75 ~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~ 154 (190)
.+++|+||+|+++|++.++|||||+++||.|++|.+|||+|||||+| +.++.+++++|.+++++++..+++++++.+.
T Consensus 33 ~m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrH--v~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~ 110 (147)
T 1xqu_A 33 TLENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEH--IANVKEINESNAQILIDIHKAANKVAEDLGI 110 (147)
T ss_dssp -CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSC--CSSGGGCCTTTTTHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcc--cCChhHCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36789999999999999999999999999999999999999999999 6677777777778899999999999999874
Q ss_pred -CCCeEEEEecCCCCCCccceEEEEEEcCCCCCCCC
Q 029617 155 -LDGFRVVINNGPGACQSVYHLHLHVLGGRQLKWPP 189 (190)
Q Consensus 155 -~~gyni~in~G~~agqsV~HlHlHVIPR~~~~wp~ 189 (190)
++|||+++|+|+.+||+|+|+|+|||||++++||+
T Consensus 111 ~~~gyni~~n~g~~aGq~v~HlHlHiiP~~~~~wp~ 146 (147)
T 1xqu_A 111 AEKGYRLITNCGVAAGQTVFHLHYHLLGGVDMGPKI 146 (147)
T ss_dssp TTTCEEEECCCSTTTTCCSCSCCEEEEESSCCCSCC
T ss_pred CCCCEEEEEecCcccCCCccEEEEEEeCCCcCCCCC
Confidence 57999999999999999999999999999999996
No 5
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=100.00 E-value=1.5e-34 Score=218.24 Aligned_cols=111 Identities=41% Similarity=0.684 Sum_probs=101.4
Q ss_pred CCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCC-
Q 029617 76 EAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGI- 154 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~- 154 (190)
.++|+||+|+++|++.++|||||+++||.|++|.+|||+|||||+| +.++.+++++|.+++++++..+++++++++.
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~ 80 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKH--YDSLIDIPDKEMDIVSHIHVVINKIAKEKGFD 80 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechh--hCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999999999999999 6777777777888999999999999888653
Q ss_pred CCCeEEEEecCCCCCCccceEEEEEEcCCCCCCC
Q 029617 155 LDGFRVVINNGPGACQSVYHLHLHVLGGRQLKWP 188 (190)
Q Consensus 155 ~~gyni~in~G~~agqsV~HlHlHVIPR~~~~wp 188 (190)
++|||+++|+|+.+||+|+|+|+|||||++++|.
T Consensus 81 ~~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~~~ 114 (119)
T 4egu_A 81 QTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNY 114 (119)
T ss_dssp HHCEEEEEEETTTTTCCSCSCCEEEEESSCCCCG
T ss_pred CCCEEEEEeCCCCCCCCcCEEEEEEeCCcccCcc
Confidence 5799999999999999999999999999998863
No 6
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.97 E-value=1.2e-31 Score=210.97 Aligned_cols=104 Identities=33% Similarity=0.389 Sum_probs=89.4
Q ss_pred CCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhC--
Q 029617 76 EAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEG-- 153 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~-- 153 (190)
..+|+||+|++||+|+++|||||+++||+|++|.+|||+|||||+| +.++.+++++ ++.+++..+++++++++
T Consensus 10 ~~~~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~---e~~~l~~~~~~v~~~l~~~ 84 (149)
T 3ksv_A 10 AANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEH--ASCLHELGME---DAADVGVLLAKASRAVAGP 84 (149)
T ss_dssp CTTCHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHH---HHHHHHHHHHHHHHHHHCT
T ss_pred cccCHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChh--hhhhhhCCHH---HHHHHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999999999999999 6666666654 45566666677766542
Q ss_pred -CCCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 154 -ILDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 154 -~~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
.++|||+++|+|+.+||+|+|+|+|||||+.
T Consensus 85 ~~~~g~ni~~n~g~~aGq~v~HlHiHiiPR~~ 116 (149)
T 3ksv_A 85 DGSMQYNVLQNNGSLAHQEVPHVHFHIIPKTD 116 (149)
T ss_dssp TSCCEEEEEECCSTTTTCCSSSCCEEEEEECC
T ss_pred hCCCCEEEEEecCcccCCCCCEEEEEEEeccc
Confidence 2689999999999999999999999999864
No 7
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.97 E-value=2.8e-31 Score=208.11 Aligned_cols=107 Identities=30% Similarity=0.448 Sum_probs=87.6
Q ss_pred CCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHh-CC
Q 029617 76 EAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKE-GI 154 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~-~~ 154 (190)
+++|+||+|+++|+|.++|||||+++||+|++|.+|||+|||||+| +.++.++++++...+..+++.+.+.+++. ..
T Consensus 4 m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~ 81 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTH--TVDLTDTPPETVAGMAAVGQRIARAARESGLH 81 (149)
T ss_dssp TTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred CCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechh--hCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6789999999999999999999999999999999999999999999 55555555555544444444333333344 23
Q ss_pred CCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 155 LDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 155 ~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
++|||+++|+|+.+||+|+|+|+|||||+.
T Consensus 82 ~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 111 (149)
T 3o0m_A 82 ADGNNIAINDGKAAFQTVFHIHLHVVPRRN 111 (149)
T ss_dssp CSEEEEECCCSGGGTCCSSSCCEEEEEECT
T ss_pred CCceEEEEecCCCCCCccceEEEEEECCcc
Confidence 789999999999999999999999999964
No 8
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.97 E-value=2.2e-31 Score=208.34 Aligned_cols=107 Identities=33% Similarity=0.440 Sum_probs=89.0
Q ss_pred CCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHH-HHHHHHhC
Q 029617 75 SEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCAS-KIVAEKEG 153 (190)
Q Consensus 75 ~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~a-k~v~~~~~ 153 (190)
.+++|+||+|+++|+|.++|||||+++||+|++|.+|||+|||||+| +.++.++++++...+..+++.+ +.+.+..+
T Consensus 7 ~m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H--~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~ 84 (147)
T 3imi_A 7 TADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVH--KQDIFALTPEIASHIFSVVPKIANAIKAEFN 84 (147)
T ss_dssp CGGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CCSGGGCCHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred ccCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeec--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999999999999999999 6667776665555444444332 22223345
Q ss_pred CCCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 154 ILDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 154 ~~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
++|||+++|+|+.+||+|+|+|+|||||+.
T Consensus 85 -~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 114 (147)
T 3imi_A 85 -PVGFNLLNNNGEKAGQTVFHFHLHLIPRYG 114 (147)
T ss_dssp -CSEEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred -CCCEEEEEeCCcccCCCcCEEEEEEeCCcc
Confidence 789999999999999999999999999976
No 9
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.97 E-value=1.6e-30 Score=206.99 Aligned_cols=104 Identities=39% Similarity=0.565 Sum_probs=86.8
Q ss_pred CCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHH---
Q 029617 75 SEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEK--- 151 (190)
Q Consensus 75 ~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~--- 151 (190)
.+++|+||+|+++|+|.++|||||+++||.|++|.+|||+|||||+| +.++.++++++.. +++..+++++++
T Consensus 26 ~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~ee~~---~l~~~~~~v~~~l~~ 100 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKG--SRNLLDADTETLF---PVIKAVQKIAKAVKK 100 (161)
T ss_dssp CCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSTTTSCHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeec--cchhhhCCHHHHH---HHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999 5555555555444 444444444443
Q ss_pred -hCCCCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 152 -EGILDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 152 -~~~~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
++ ++|||+++|+|+.+||+|+|+|+|||||+.
T Consensus 101 ~~~-~~g~ni~~n~g~~aGq~V~HlHiHiiPR~~ 133 (161)
T 3lb5_A 101 AFQ-ADGITVMQFNEAASQQTVYHLHFHIIPRME 133 (161)
T ss_dssp HHT-CSEEEEEEEESGGGTCCSCSCCEEEEEECT
T ss_pred hcC-CCCEEEEEecCcccCCCCCEEEEEEEcccC
Confidence 34 689999999999999999999999999964
No 10
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.96 E-value=1.4e-30 Score=209.78 Aligned_cols=107 Identities=34% Similarity=0.460 Sum_probs=88.8
Q ss_pred CCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHH-HHHHHHhC
Q 029617 75 SEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCAS-KIVAEKEG 153 (190)
Q Consensus 75 ~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~a-k~v~~~~~ 153 (190)
.+++|+||+|+++|+|.++|||||+++||+|++|.+|||+|||||+| +.++.++++++...|..+++.+ +.+.+.++
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrH--v~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~ 111 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEH--VRNALEMTQTQAANLFARIPKIARALQKATK 111 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CSCGGGCCHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccc--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999999999999999 6666666665555444444322 22323345
Q ss_pred CCCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 154 ILDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 154 ~~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
++|||+++|+|+.+||+|+|+|+|||||+.
T Consensus 112 -~~g~ni~~n~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 112 -ADGLNIINNNEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp -CSEEEEEECCSGGGTCCSCSCCEEEEEECC
T ss_pred -CCCEEEEEecCcccCCCcCEEEEEEEeccc
Confidence 789999999999999999999999999975
No 11
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.96 E-value=2.7e-30 Score=200.61 Aligned_cols=106 Identities=35% Similarity=0.444 Sum_probs=87.5
Q ss_pred CCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHH-hCC
Q 029617 76 EAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEK-EGI 154 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~-~~~ 154 (190)
.++|+||+|+++|++.++|||||+++||+|.+|.+|||+|||||+| +.++.++++++...+..+++.+.+..++ .+
T Consensus 4 ~~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h--~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~- 80 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTH--IENVYEFTDELAKQYFHAVPKIARAIRDEFE- 80 (145)
T ss_dssp -CCCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CSSGGGCCHHHHHTTTTHHHHHHHHHHHHHC-
T ss_pred CCCCcCCccccCCCCCCEEEECCCEEEEECCCCCCCCeEEEEEhhh--hhhHHhCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 4679999999999999999999999999999999999999999999 6667776666555555444433322233 44
Q ss_pred CCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 155 LDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 155 ~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
++|||+++|+|+.+||+|+|+|+|||||+.
T Consensus 81 ~~~~ni~~n~g~~~g~~v~HlH~HiiPr~~ 110 (145)
T 1y23_A 81 PIGLNTLNNNGEKAGQSVFHYHMHIIPRYG 110 (145)
T ss_dssp CSEEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred CCCEEEEEcCCcCCCCCcCEEEEEEEcccc
Confidence 689999999999999999999999999874
No 12
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.96 E-value=3.1e-30 Score=199.14 Aligned_cols=102 Identities=28% Similarity=0.467 Sum_probs=85.4
Q ss_pred cCCCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHh
Q 029617 73 AGSEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKE 152 (190)
Q Consensus 73 ~~~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~ 152 (190)
++++++|+||+|++ .+.++|||||+++||.|++|.+|||+|||||+| +.++.++++++ +.+++..++++++++
T Consensus 2 ~~~~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H--~~~l~dL~~~~---~~~l~~~~~~v~~~~ 74 (135)
T 3r6f_A 2 PGSMEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAH--HPYLHNYKPEE---LSGVLDTIRHLVQKF 74 (135)
T ss_dssp ----CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCGGG---GTTHHHHHHHHHHHH
T ss_pred CCCCCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhH--hCCHhHCCHHH---HHHHHHHHHHHHHHh
Confidence 35678999999997 678999999999999999999999999999999 55666665544 456666678888888
Q ss_pred CCCCCeEEEEecCCCCCCccceEEEEEEcCCC
Q 029617 153 GILDGFRVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 153 ~~~~gyni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
+ +++||+++|+|+ ||+|+|+|+|||||+.
T Consensus 75 ~-~~~~ni~~n~g~--gq~v~HlH~HiiPR~~ 103 (135)
T 3r6f_A 75 G-FERYNILQNNGN--HQEVFHVHFHVIPFVS 103 (135)
T ss_dssp T-CCSEEEECCSSS--SCSSSSCCEEEEECCB
T ss_pred C-CCCeEEEEEcCC--CCCccEEEEEEecccc
Confidence 7 579999999998 9999999999999863
No 13
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.96 E-value=1.2e-29 Score=198.33 Aligned_cols=104 Identities=30% Similarity=0.436 Sum_probs=86.4
Q ss_pred ceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCCCCCe
Q 029617 79 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGILDGF 158 (190)
Q Consensus 79 CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~~~gy 158 (190)
|+||+|+++|++.++|||||+++||+|++|.+|||+|||||+| +.++.++++++...+..+++.+.+..++...++||
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H--~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 78 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKH--FENYLEADEDTLAELAKVVKLVSLGIKDAVKADGL 78 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechh--hCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 9999999999999999999999999999999999999999999 66677776665555555444333333333336899
Q ss_pred EEEEecCCCCCCccceEEEEEEcCCC
Q 029617 159 RVVINNGPGACQSVYHLHLHVLGGRQ 184 (190)
Q Consensus 159 ni~in~G~~agqsV~HlHlHVIPR~~ 184 (190)
|+++|+|+.+||+|+|+|+|||||+.
T Consensus 79 ni~~n~g~~~gq~v~HlHiHviPr~~ 104 (149)
T 2eo4_A 79 RLLTNIGRSAGQVIFHLHVHIIPTWE 104 (149)
T ss_dssp EEECCCSGGGTCCSCSCCEEEEEECS
T ss_pred EEEEecCcCCCCCcCEEEEEEECCcC
Confidence 99999999999999999999999864
No 14
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.95 E-value=2e-28 Score=189.11 Aligned_cols=101 Identities=29% Similarity=0.425 Sum_probs=79.6
Q ss_pred CCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHH-HHHHHhCCC
Q 029617 77 APTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASK-IVAEKEGIL 155 (190)
Q Consensus 77 ~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak-~v~~~~~~~ 155 (190)
++|+||+|++||+|+++|||||+++||.|++|.+|||+|||||+| +.++.++++++...+..+++.+. .+.+..+ +
T Consensus 5 ~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~-~ 81 (138)
T 3p0t_A 5 MASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREE--IDNWQDVDSAAFNRVMGVSQLIGKAVCKAFR-T 81 (138)
T ss_dssp HHHHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CCCGGGSCHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred CCChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHH--hCchhhCCHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 469999999999999999999999999999999999999999999 66677766654444444443222 2222344 6
Q ss_pred CCeEEEEecCCCCCCccceEEEEEEcCCCC
Q 029617 156 DGFRVVINNGPGACQSVYHLHLHVLGGRQL 185 (190)
Q Consensus 156 ~gyni~in~G~~agqsV~HlHlHVIPR~~~ 185 (190)
+++|+. .+||+|+|+|+|||||++.
T Consensus 82 ~~~n~~-----~~gq~v~HlH~HiiPr~~~ 106 (138)
T 3p0t_A 82 ERSGLI-----IAGLEVPHLHVHVFPTRSL 106 (138)
T ss_dssp SEEEEE-----ECCSSCSSCCEEEEEESCG
T ss_pred CCCcEE-----ECCcccCEEEEEEeccccC
Confidence 788874 3699999999999999763
No 15
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.95 E-value=3.3e-28 Score=202.56 Aligned_cols=109 Identities=23% Similarity=0.266 Sum_probs=95.8
Q ss_pred CCCCceeheecccc-cCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhC
Q 029617 75 SEAPTIFDKIIAKE-IPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEG 153 (190)
Q Consensus 75 ~~~~CiFC~Ii~~e-~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~ 153 (190)
.+++|+||+|++++ .+.++|||||+++||+|++|.+|||+|||||+| +.++.++++++...|..+++.+.+++++..
T Consensus 67 ~~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrH--v~~l~dL~~ee~~~L~~l~~~v~~~l~~~~ 144 (218)
T 3ano_A 67 ASPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRR--VSELEDLTDLESAELMAFTQKAIRVIKNVS 144 (218)
T ss_dssp ---CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSC--CCCGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechh--hCChhhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 35689999999984 678999999999999999999999999999999 777777777888888888888777777766
Q ss_pred CCCCeEEEEecCCCCCCcc-ceEEEEEEcCCCC
Q 029617 154 ILDGFRVVINNGPGACQSV-YHLHLHVLGGRQL 185 (190)
Q Consensus 154 ~~~gyni~in~G~~agqsV-~HlHlHVIPR~~~ 185 (190)
.++|||+++|+|+.+||+| +|+|+|||||+.-
T Consensus 145 ~~~g~ni~~n~G~~aGq~V~~HlHiHIIPR~~g 177 (218)
T 3ano_A 145 RPHGFNVGLNLGTSAGGSLAEHLHVHVVPRWGG 177 (218)
T ss_dssp CCSEEEEEEEESGGGTCTTTTSCCEEEEEECTT
T ss_pred CCCCEEEEEecCcccCCcccCEEEEEEEcccCC
Confidence 6789999999999999999 9999999999763
No 16
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.93 E-value=1.1e-25 Score=175.35 Aligned_cols=105 Identities=24% Similarity=0.279 Sum_probs=80.8
Q ss_pred eeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 029617 80 IFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGILDGFR 159 (190)
Q Consensus 80 iFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~~~gyn 159 (190)
.||.+. ..+.++|||||+++||+|++|.+|||+|||||+| +.++.++++++...+..+++.+.+.+++...++|||
T Consensus 4 ~f~~~~--ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h--~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (147)
T 1fit_A 4 RFGQHL--IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRP--VERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLT 79 (147)
T ss_dssp EETTEE--ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred EecCcc--cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccc--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 577763 2247899999999999999999999999999999 666777666655555444443333333333368999
Q ss_pred EEEecCCCCCCccceEEEEEEcCCCCCCC
Q 029617 160 VVINNGPGACQSVYHLHLHVLGGRQLKWP 188 (190)
Q Consensus 160 i~in~G~~agqsV~HlHlHVIPR~~~~wp 188 (190)
+++|+|+.+||+|+|+|+|||||++..|+
T Consensus 80 i~~n~g~~agq~v~HlH~HiiPr~~~d~~ 108 (147)
T 1fit_A 80 FSMQDGPEAGQTVKHVHVHVLPRKAGDFH 108 (147)
T ss_dssp EEECCSGGGTCCSSSCCEEEEEECTTC--
T ss_pred EEEecCCccCCCccEEEEEEECCcCCCCC
Confidence 99999999999999999999999887654
No 17
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.92 E-value=1.7e-25 Score=197.45 Aligned_cols=116 Identities=15% Similarity=0.173 Sum_probs=97.5
Q ss_pred hhHHHHHHHHHHhcCCCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHH
Q 029617 60 NDEEAAAKAAALNAGSEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILG 139 (190)
Q Consensus 60 ~~e~~~a~~~~~~~~~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~ 139 (190)
..|++.++++ ++.+++|+||+|+++|+ +|||||+|+||.|++|.+|||+|||||+| +.++.++++++...|+
T Consensus 200 ~~e~~~~~~y---~~~~~~ciFc~ii~~E~---iV~E~e~~~af~~~~p~~P~h~lViPk~H--v~~l~dl~~~e~~~La 271 (351)
T 1z84_A 200 SSRLDGTKDY---FEETGKCCLCEAKSKHF---VIDESSHFVSVAPFAATYPFEIWIIPKDH--SSHFHHLDDVKAVDLG 271 (351)
T ss_dssp HHHHHHHHHH---HHHHSSCTTTTHHHHSE---EEEECSSEEEEECTTCSSTTCEEEEESSC--CSCGGGCCHHHHHHHH
T ss_pred HHHHHHHHHH---HhhcCCCHHHHHHhcCe---EEecCCcEEEEeccCCCCCeEEEEEeccc--cCChHHCCHHHHHHHH
Confidence 4455555555 67789999999999987 99999999999999999999999999999 6777777777888888
Q ss_pred HHHHHH-HHHHHHhCCCCCeEEEEecCCCCC----CccceEEEEEEcCCC
Q 029617 140 HLLCAS-KIVAEKEGILDGFRVVINNGPGAC----QSVYHLHLHVLGGRQ 184 (190)
Q Consensus 140 ~ll~~a-k~v~~~~~~~~gyni~in~G~~ag----qsV~HlHlHVIPR~~ 184 (190)
++++.+ +++.+.++ .+|||+++|+|+.+| |+++|+|+|||||.+
T Consensus 272 ~~l~~v~~~l~~~~~-~~~yn~~~n~gp~~g~~~~q~v~HlHiHiiPR~~ 320 (351)
T 1z84_A 272 GLLKLMLQKIAKQLN-DPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLS 320 (351)
T ss_dssp HHHHHHHHHHHHHTT-SCCEEEEEECCCTTCCGGGGGGCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEeCCCccCCCCCCccceEEEEEEccCC
Confidence 887743 55555566 469999999999877 799999999999874
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.92 E-value=3.3e-25 Score=174.09 Aligned_cols=103 Identities=14% Similarity=0.115 Sum_probs=81.0
Q ss_pred CCCCceeheecccccCccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCC
Q 029617 75 SEAPTIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGI 154 (190)
Q Consensus 75 ~~~~CiFC~Ii~~e~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~ 154 (190)
.+++|+||++ ++.++|||||+++||.|++|.+|||+|||||+| +.++.++++++...|..+++.+.+.+++...
T Consensus 8 ~~~~C~FC~~----~~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H--~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~ 81 (154)
T 2oik_A 8 FHKNCELCTT----AGGEILWQDALCRVVHVENQDYPGFCRVILNRH--VKEMSDLRPAERDHLMLVVFAVEEAVREVMR 81 (154)
T ss_dssp CCTTCHHHHS----CCSEEEEECSSEEEEECCCTTCTTCEEEEESSC--CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCccCCC----CCCeEEEECCcEEEEEcCCCCCCeEEEEEecCC--cCChHHCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999984 467899999999999999999999999999999 6677777666666666665544444443333
Q ss_pred CCCeEEEEecCCCCCCccceEEEEEEcCCCC--CCC
Q 029617 155 LDGFRVVINNGPGACQSVYHLHLHVLGGRQL--KWP 188 (190)
Q Consensus 155 ~~gyni~in~G~~agqsV~HlHlHVIPR~~~--~wp 188 (190)
++|||++ .+||+|+|+|+|||||++. .||
T Consensus 82 ~~g~ni~-----~~gq~v~HlHiHiiPr~~~d~~~~ 112 (154)
T 2oik_A 82 PDKINLA-----SLGNMTPHVHWHVIPRFKRDRHFP 112 (154)
T ss_dssp CSEEEEE-----ECCSSSCSCEEEEEEECTTSSSTT
T ss_pred CCcEEhH-----HhCCCCCEEEEEEeCCCCCCCCCC
Confidence 6899996 3689999999999999753 455
No 19
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.92 E-value=2.8e-25 Score=195.67 Aligned_cols=126 Identities=16% Similarity=0.156 Sum_probs=100.6
Q ss_pred hhHHHHHHHHHHhcCCCCCceeheecccccCc--cEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHH
Q 029617 60 NDEEAAAKAAALNAGSEAPTIFDKIIAKEIPS--SIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDI 137 (190)
Q Consensus 60 ~~e~~~a~~~~~~~~~~~~CiFC~Ii~~e~p~--~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~ 137 (190)
..|++.++++ ++.+++|+||+|+++|++. ++|||||+++||.|++|.+|||+|||||+| +.++.++++++...
T Consensus 180 ~~e~~~~~~y---~~~~~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~H--v~~l~dL~~~e~~~ 254 (348)
T 1gup_A 180 EREDRLQKEY---FAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH--VLRITDLTDAQRSD 254 (348)
T ss_dssp HHHHHHHHHH---HHHHSSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSC--CSSGGGCCHHHHHH
T ss_pred HHHHHHHHHH---HhcCCCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcc--cCChHHCCHHHHHH
Confidence 4455555555 6667899999999999876 999999999999999999999999999999 67777777777777
Q ss_pred HHHHHH-HHHHHHHHhCCCCCeEEEEecCCCC--CCccceEEEEEEc---CCC--CCCCCC
Q 029617 138 LGHLLC-ASKIVAEKEGILDGFRVVINNGPGA--CQSVYHLHLHVLG---GRQ--LKWPPG 190 (190)
Q Consensus 138 L~~ll~-~ak~v~~~~~~~~gyni~in~G~~a--gqsV~HlHlHVIP---R~~--~~wp~~ 190 (190)
|+++++ +++++.+..+...+||+++|.++.. +|+++|+|+|||| |+. .+|..|
T Consensus 255 La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~~q~v~HlHiHiiPpl~R~~~~~~~~~g 315 (348)
T 1gup_A 255 LALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVG 315 (348)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSSCCTTCCCEEEEECCBCSSSSCBCCCCT
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCCCCcccEEEEEEecchhccCCcccceee
Confidence 777765 3445555566435999999999864 4899999999999 764 345443
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.91 E-value=1.4e-24 Score=194.80 Aligned_cols=104 Identities=24% Similarity=0.393 Sum_probs=84.5
Q ss_pred CCCceeheecccccCc-cEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHH---
Q 029617 76 EAPTIFDKIIAKEIPS-SIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEK--- 151 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~-~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~--- 151 (190)
.+.|+||+ +|+|. ++|||||+++||.|++|.+|||+|||||+| +.++.++++++.. +|+..+++++++
T Consensus 296 ~~~c~fc~---~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h--~~~~~~l~~~~~~---~l~~~~~~v~~~l~~ 367 (440)
T 1ems_A 296 TGGLKFAR---FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRV--VPRLTDLTDAETA---DLFIVAKKVQAMLEK 367 (440)
T ss_dssp SSCCEETT---EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSC--CSCGGGSCHHHHH---HHHHHHHHHHHHHHH
T ss_pred cCceeeec---cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccc--cCChhHCCHHHHH---HHHHHHHHHHHHHHh
Confidence 45799998 57775 799999999999999999999999999999 6666666665544 444444444443
Q ss_pred hCCCCCeEEEEecCCCCCCccceEEEEEEcCCCCCC
Q 029617 152 EGILDGFRVVINNGPGACQSVYHLHLHVLGGRQLKW 187 (190)
Q Consensus 152 ~~~~~gyni~in~G~~agqsV~HlHlHVIPR~~~~w 187 (190)
...++|||+++|+|+.+||+|+|+|+|||||++..|
T Consensus 368 ~~~~~~~n~~~~~g~~~gq~v~HlH~Hiipr~~~d~ 403 (440)
T 1ems_A 368 HHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDF 403 (440)
T ss_dssp HTTCSEEEEECCCSGGGTCCSSSCCEEEEEECSSCC
T ss_pred hcCCCCeEEEEecCCCCCCCccEEEEEEeCCCCCCC
Confidence 233689999999999999999999999999988664
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.80 E-value=3.5e-19 Score=138.05 Aligned_cols=91 Identities=19% Similarity=0.109 Sum_probs=71.2
Q ss_pred CccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHH-HHHHHHHHHhCCCCCeEEEEecCCCC
Q 029617 90 PSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL-CASKIVAEKEGILDGFRVVINNGPGA 168 (190)
Q Consensus 90 p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll-~~ak~v~~~~~~~~gyni~in~G~~a 168 (190)
+..+|+|++.++++++.+|.+|||+||+||+| +.++.++++++...+...+ .+++.+.+..+ ++|+|++ .+
T Consensus 12 d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~-----~a 83 (137)
T 3ohe_A 12 DTHKLGESRLCDVLLMNDNTWPWVILVPRVSG--IREIYELPNEQQQRLLFESSALSEGMMELFG-GDKMNVA-----AL 83 (137)
T ss_dssp HEEEEEECSSEEEEEESCTTSCEEEEEESCTT--CCSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEE-----EC
T ss_pred ccEEEEECCcEEEEEcCCCCCCEEEEEecccc--cCChHHCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEe-----ec
Confidence 35799999999999999999999999999999 6677777666655444333 34455555555 6898886 57
Q ss_pred CCccceEEEEEEcCCC--CCCC
Q 029617 169 CQSVYHLHLHVLGGRQ--LKWP 188 (190)
Q Consensus 169 gqsV~HlHlHVIPR~~--~~wp 188 (190)
||+|+|+|+|||||++ ..||
T Consensus 84 Gq~V~HlH~HviPR~~~D~~~p 105 (137)
T 3ohe_A 84 GNMVPQLHLHHIVRYQGDPAWP 105 (137)
T ss_dssp CSSCCSCCEEEEEECTTSTTTT
T ss_pred cCcCCEEEEEEeCCCCCCCCCC
Confidence 9999999999999975 4564
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.78 E-value=7.2e-19 Score=138.26 Aligned_cols=91 Identities=11% Similarity=0.105 Sum_probs=71.3
Q ss_pred CccEEEEcCeEEEEeeCCCCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHH-HHHHHHHHHhCCCCCeEEEEecCCCC
Q 029617 90 PSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL-CASKIVAEKEGILDGFRVVINNGPGA 168 (190)
Q Consensus 90 p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll-~~ak~v~~~~~~~~gyni~in~G~~a 168 (190)
+..+|+|++.+++|++.+|.+|||+||+||+| +.++.++++++...+...+ .+++.+.+..+ ++|+|++ .+
T Consensus 12 d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~H--v~~l~dL~~e~~~~l~~~~~~va~al~~~~~-~~~~Ni~-----~a 83 (149)
T 3i24_A 12 DCIVLGNLPLCKVLLIKEDIGPWLILVPRIEE--LKEIHHMTDEQQIQFIKESSAVAQLLEDNFS-PDKINIG-----AL 83 (149)
T ss_dssp HEEEEEECSSEEEEEECBSSTTEEEEEESCTT--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHHC-CSEEEEE-----EC
T ss_pred CCEEEEECCCEEEEEcCCCCCCEEEEEeCccc--cCChhHCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEh-----hh
Confidence 35799999999999999999999999999999 6667776666554443333 34555555566 6898886 37
Q ss_pred CCccceEEEEEEcCCC--CCCC
Q 029617 169 CQSVYHLHLHVLGGRQ--LKWP 188 (190)
Q Consensus 169 gqsV~HlHlHVIPR~~--~~wp 188 (190)
||+|+|+|+|||||++ ..||
T Consensus 84 Gq~V~HlH~HvIPR~~~D~~~~ 105 (149)
T 3i24_A 84 GNLVPQLHIHHIARFTTDVAWP 105 (149)
T ss_dssp CSSCCSCCEEEEEECTTSTTTT
T ss_pred hCCCCEEEEEEeCCccCCCCCC
Confidence 9999999999999986 4565
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.71 E-value=3.6e-17 Score=126.28 Aligned_cols=90 Identities=13% Similarity=0.187 Sum_probs=67.4
Q ss_pred CccEEEEcCeEEEEeeCCCCCCeEEEEEee-cCCCCCCchhhhhhHHHHHHHHH-HHHHHHHHHhCCCCCeEEEEecCCC
Q 029617 90 PSSIVYEDEKVLAFRDINPQAPVHVLIIPK-FRDGLTTLAKAEARHGDILGHLL-CASKIVAEKEGILDGFRVVINNGPG 167 (190)
Q Consensus 90 p~~IVyEde~~vaf~d~~P~~pgHvLVIPK-rH~~l~dL~~l~~~~~~~L~~ll-~~ak~v~~~~~~~~gyni~in~G~~ 167 (190)
+..+|+|++.+.++++.+|.+|| +||||| +| +.++.++++++...+...+ .+++.+.+..+ ++|+|++ .
T Consensus 14 ~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~-----~ 84 (135)
T 3nrd_A 14 DGIPIGTLGLCQMRLMNDRRWPW-LILVPQRAD--IKEVFELTPLDQAMLTFETNLVAAGLKKATG-AEKINIG-----A 84 (135)
T ss_dssp HEEEEEECSSEEEEEESCTTSCE-EEEEECCTT--CCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE-----E
T ss_pred CCEEEEECCcEEEEEcCCCCCCE-EEEEcCccc--cCChHHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe-----e
Confidence 35799999999999999999995 578888 68 6667776666554343333 34455555566 6898885 5
Q ss_pred CCCccceEEEEEEcCCC--CCCC
Q 029617 168 ACQSVYHLHLHVLGGRQ--LKWP 188 (190)
Q Consensus 168 agqsV~HlHlHVIPR~~--~~wp 188 (190)
+||+|+|+|+|||||++ ..||
T Consensus 85 aGq~V~HlH~HviPR~~~D~~~~ 107 (135)
T 3nrd_A 85 LGNIVRQLHVHVIARREGDPNWP 107 (135)
T ss_dssp CCSSCCSCCEEEEEECTTSTTTT
T ss_pred ccCCCCEEEEEEecCCCCCCCCC
Confidence 79999999999999975 3465
No 24
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.68 E-value=1e-17 Score=137.93 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=66.6
Q ss_pred EEEEcCeEEEEeeCCCCCCeEEEEEeecC-CCCCCchhhhhhHHHHHHHHHHHHH-HH-HHHh--------CCC--CCeE
Q 029617 93 IVYEDEKVLAFRDINPQAPVHVLIIPKFR-DGLTTLAKAEARHGDILGHLLCASK-IV-AEKE--------GIL--DGFR 159 (190)
Q Consensus 93 IVyEde~~vaf~d~~P~~pgHvLVIPKrH-~~l~dL~~l~~~~~~~L~~ll~~ak-~v-~~~~--------~~~--~gyn 159 (190)
+|||||.++||.|++|.+|||+|||||+| .++.++.+.-.++.+++++|...+. ++ .+.. +.+ .+|.
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 99999999999999999999999999999 4454443322234667788877766 53 3222 222 2344
Q ss_pred EEEecCCCCCCccceEEEEEEcCC
Q 029617 160 VVINNGPGACQSVYHLHLHVLGGR 183 (190)
Q Consensus 160 i~in~G~~agqsV~HlHlHVIPR~ 183 (190)
..++.|.+++|||+|||+|||.++
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~D 126 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLD 126 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESC
T ss_pred eeEeccCCCCCcccceeEEEeccC
Confidence 456667778899999999999864
No 25
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.65 E-value=5.9e-16 Score=121.63 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=62.5
Q ss_pred ccEEEEcCeEEEEeeCCCCCCeEEEEEeec-CCCCCCchhhhhhHHHHHHHHHHHHHHHHH----HhCCCCCeEEEEecC
Q 029617 91 SSIVYEDEKVLAFRDINPQAPVHVLIIPKF-RDGLTTLAKAEARHGDILGHLLCASKIVAE----KEGILDGFRVVINNG 165 (190)
Q Consensus 91 ~~IVyEde~~vaf~d~~P~~pgHvLVIPKr-H~~l~dL~~l~~~~~~~L~~ll~~ak~v~~----~~~~~~gyni~in~G 165 (190)
..+++|.+.++++.+.. .+++|+|||||+ | +.++.++++++.. +++..++++++ ..+ ++|||++
T Consensus 18 ~~~~~e~p~~~v~l~~~-~~~~H~LVIPk~~H--~~~l~dL~~e~~~---~l~~~~~~va~~l~~~~~-~~g~N~~---- 86 (149)
T 3i4s_A 18 TIDIGDLPLSKVLVIKD-ANYPWLLLVPRRPD--AVEIIDLDEVQQA---QLMTEISRVSRALKEITK-CDKLNIA---- 86 (149)
T ss_dssp EEEEEECSSEEEEEESC-TTSCEEEEEECCTT--CCSGGGSCHHHHH---HHHHHHHHHHHHHHHHHT-CSEEEEE----
T ss_pred CEEEEEcCceEEEECCC-CCCCEEEEEecccc--cCChhHCCHHHHH---HHHHHHHHHHHHHHHhcC-CCeEEEe----
Confidence 46888999999988854 466699999999 8 6666666655444 44444444443 344 6888885
Q ss_pred CCCCCccceEEEEEEcCCC--CCCC
Q 029617 166 PGACQSVYHLHLHVLGGRQ--LKWP 188 (190)
Q Consensus 166 ~~agqsV~HlHlHVIPR~~--~~wp 188 (190)
.+||+|+|+|+|||||++ ..||
T Consensus 87 -~aGq~V~HlH~HvIPR~~~D~~~p 110 (149)
T 3i4s_A 87 -ALGNLVPQLHVHIIARRTGDAAWP 110 (149)
T ss_dssp -ECCSSCCSCCEEEEEECTTSTTTT
T ss_pred -ecCCcCCEEEEEEECCcCCCCCCC
Confidence 579999999999999975 3464
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=99.16 E-value=1.3e-10 Score=100.42 Aligned_cols=96 Identities=24% Similarity=0.369 Sum_probs=80.2
Q ss_pred eeccc-ccCccEEEEcCe----EEEEeeCC----CCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHh-
Q 029617 83 KIIAK-EIPSSIVYEDEK----VLAFRDIN----PQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKE- 152 (190)
Q Consensus 83 ~Ii~~-e~p~~IVyEde~----~vaf~d~~----P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~- 152 (190)
.|+.+ +.+.+++|||++ |++|.|.. |...-|+|+||++| ++.++.++..++.++|..|...+++++++.
T Consensus 142 nIl~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~-~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y 220 (301)
T 3bl9_A 142 NILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRR-GIRSLRDLTPEHLPLLRNILHQGQEAILQRY 220 (301)
T ss_dssp HHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSS-CCCSGGGCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEeccc-CCCChHHCCHhHHHHHHHHHHHHHHHHHHhc
Confidence 45655 445799999988 99999987 78999999999998 588888888899999999999999888764
Q ss_pred CC-CCCeEEEEecCCCCCCccceEEEEEEcCC
Q 029617 153 GI-LDGFRVVINNGPGACQSVYHLHLHVLGGR 183 (190)
Q Consensus 153 ~~-~~gyni~in~G~~agqsV~HlHlHVIPR~ 183 (190)
+. .+.+++++|.-| +++|+|+|||.-.
T Consensus 221 ~~~~~~~rlgfHy~P----S~yHLHlHvis~~ 248 (301)
T 3bl9_A 221 RMKGDHLRVYLHYLP----SYYHLHVHFTALG 248 (301)
T ss_dssp CCCGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred CCChHHeEEEecCCC----CcceEEEEEEecC
Confidence 43 356999988754 8999999999643
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=99.11 E-value=2.3e-10 Score=100.32 Aligned_cols=96 Identities=25% Similarity=0.376 Sum_probs=78.6
Q ss_pred eeccc-ccCccEEEEcCe----EEEEeeCC----CCCCeEEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHh-
Q 029617 83 KIIAK-EIPSSIVYEDEK----VLAFRDIN----PQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKE- 152 (190)
Q Consensus 83 ~Ii~~-e~p~~IVyEde~----~vaf~d~~----P~~pgHvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~- 152 (190)
.|+.+ +.+.++||||++ |++|.|.. |...-|+|+||++| ++.++.++..++.++|..|...+++++.+.
T Consensus 189 nIl~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~-dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~y 267 (350)
T 1vlr_A 189 NILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRR-GIRSLRDLTPEHLPLLRNILREGQEAILKRY 267 (350)
T ss_dssp HHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSS-CCCSGGGCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEeccc-CCCChHHCCHhHHHHHHHHHHHHHHHHHHhc
Confidence 45555 345799999988 99999987 78999999999998 588888888899999999999999888764
Q ss_pred CC-CCCeEEEEecCCCCCCccceEEEEEEcCC
Q 029617 153 GI-LDGFRVVINNGPGACQSVYHLHLHVLGGR 183 (190)
Q Consensus 153 ~~-~~gyni~in~G~~agqsV~HlHlHVIPR~ 183 (190)
+. .+.++++++.-| +++|||+|||.-.
T Consensus 268 g~~~~~lRlgfHy~P----S~yHLHlHvis~~ 295 (350)
T 1vlr_A 268 QVTGDRLRVYLHYLP----SYYHLHVHFTALG 295 (350)
T ss_dssp CCCGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred CCChHHeEEEecCCC----CcceEEEEEEecc
Confidence 43 356999988754 8999999999643
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.37 E-value=1.4e-06 Score=76.50 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=67.7
Q ss_pred CCCceeheecccccCccEEE-----EcCeEEEEeeCCCCCC------------e-----------EEEEEeecCCCCCCc
Q 029617 76 EAPTIFDKIIAKEIPSSIVY-----EDEKVLAFRDINPQAP------------V-----------HVLIIPKFRDGLTTL 127 (190)
Q Consensus 76 ~~~CiFC~Ii~~e~p~~IVy-----Ede~~vaf~d~~P~~p------------g-----------HvLVIPKrH~~l~dL 127 (190)
...|+||.--....+..+.. .+-.+++|.+.+|..+ | +++|.+.+| -.+|
T Consensus 60 ~~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H--~~~l 137 (351)
T 1z84_A 60 PSSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVH--SIQL 137 (351)
T ss_dssp -CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSS--SCCG
T ss_pred CCCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCC--CCCc
Confidence 34799998433332322222 3567899999999983 4 888999999 3445
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEecCCCCCCccceEEEEEEc
Q 029617 128 AKAEARHGDILGHLLCASKIVAEKEGI---LDGFRVVINNGPGACQSVYHLHLHVLG 181 (190)
Q Consensus 128 ~~l~~~~~~~L~~ll~~ak~v~~~~~~---~~gyni~in~G~~agqsV~HlHlHVIP 181 (190)
.+++.+ .+.+++...++-.++++. ...++++.|.|+.+|.|++|.|.||+.
T Consensus 138 ~~ls~~---e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a 191 (351)
T 1z84_A 138 SDIDPV---GIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMA 191 (351)
T ss_dssp GGSCHH---HHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEE
T ss_pred HHCCHH---HHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEe
Confidence 555444 444555554444444442 345688999999999999999999985
No 29
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=96.74 E-value=0.0022 Score=53.17 Aligned_cols=83 Identities=18% Similarity=0.362 Sum_probs=53.2
Q ss_pred EEEcCeEEEEeeCCCCCCeEEEEEeecC-CCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCC--C-CCeEEEEecCCCCC
Q 029617 94 VYEDEKVLAFRDINPQAPVHVLIIPKFR-DGLTTLAKAEARHGDILGHLLCASKIVAEKEGI--L-DGFRVVINNGPGAC 169 (190)
Q Consensus 94 VyEde~~vaf~d~~P~~pgHvLVIPKrH-~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~--~-~gyni~in~G~~ag 169 (190)
|.....+++|.| +..|.|+|+||... ..+.+-.-+++.....+..--..-..+.++.|. + +..-+.+|. ..|
T Consensus 34 Vd~~~gyvvlKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS--~~g 109 (227)
T 2pof_A 34 VKPNAGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINS--RTG 109 (227)
T ss_dssp EETTTTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBC--GGG
T ss_pred EccCCCEEEEeC--CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecC--CCC
Confidence 445566777777 55899999999987 456554444443334454444333345566663 3 346778886 357
Q ss_pred CccceEEEEEE
Q 029617 170 QSVYHLHLHVL 180 (190)
Q Consensus 170 qsV~HlHlHVI 180 (190)
-+-.|||+||=
T Consensus 110 RSQnQLHIHIs 120 (227)
T 2pof_A 110 RTQNHFHIHIS 120 (227)
T ss_dssp CSCCSCCEEEE
T ss_pred ccccceeeehh
Confidence 78889999975
No 30
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=94.91 E-value=0.038 Score=47.99 Aligned_cols=64 Identities=14% Similarity=0.027 Sum_probs=36.2
Q ss_pred EEEEEeecCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHhCCCCCeE-EEEecCCCCCCccceEEEEEEc
Q 029617 113 HVLIIPKFRDGLTTLAKAEARHGDILGHLLCASKIVAEKEGILDGFR-VVINNGPGACQSVYHLHLHVLG 181 (190)
Q Consensus 113 HvLVIPKrH~~l~dL~~l~~~~~~~L~~ll~~ak~v~~~~~~~~gyn-i~in~G~~agqsV~HlHlHVIP 181 (190)
.++|...+| -.+|.+++.++.. .++....+-.++++....|- +..|.|+.+|.|.+|-|..|+.
T Consensus 107 ~VIi~sp~H--~~~l~~l~~~~~~---~vi~~~~~r~~~l~~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a 171 (348)
T 1gup_A 107 RVICFSPDH--SKTLPELSVAALT---EIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPGGQIWA 171 (348)
T ss_dssp EEEESCSCT--TCCGGGSCHHHHH---HHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred EEEEcCCcc--cCChhhCCHHHHH---HHHHHHHHHHHHHhhcCCEEEEecccCCcCCcCCCCCceeEEe
Confidence 344444467 3445555544443 33333222222222112343 5678899999999999999985
No 31
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=72.75 E-value=3.4 Score=30.26 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=21.0
Q ss_pred CCCeEEEEecCCCCCCccceEEEEEE
Q 029617 155 LDGFRVVINNGPGACQSVYHLHLHVL 180 (190)
Q Consensus 155 ~~gyni~in~G~~agqsV~HlHlHVI 180 (190)
-|..++.+| +.+.|-+++|+|+|+.
T Consensus 76 vDHVdi~~~-~gHpGve~PHyhI~l~ 100 (116)
T 3vg8_G 76 IDHVNMIPS-GPHPGVSEPHYHIELV 100 (116)
T ss_dssp CCEEEEEEC-CCCTTCCSCEEEEEEE
T ss_pred cceEEEecC-CCCCCcccCceEEEEE
Confidence 477888886 5588999999999986
No 32
>1ts9_A Ribonuclease P protein component 1; anti-parallel, beta-sheet, alpha helix, internal salt bridge, selenomethionine, SM-fold, hydrolase; 1.70A {Archaeoglobus fulgidus} SCOP: b.137.1.1 PDB: 1tsf_A 1pc0_A
Probab=24.17 E-value=73 Score=22.62 Aligned_cols=26 Identities=15% Similarity=0.193 Sum_probs=23.0
Q ss_pred ccEEEEcCeEEEEeeCCCCCCeEEEEEeecC
Q 029617 91 SSIVYEDEKVLAFRDINPQAPVHVLIIPKFR 121 (190)
Q Consensus 91 ~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH 121 (190)
+.+|.|+.+.+.+.. .+.+.+|||.+
T Consensus 35 GiVV~ETkntf~I~t-----~~~~k~VPK~~ 60 (102)
T 1ts9_A 35 GEVVDETQNTLKIMT-----EKGLKVVAKRG 60 (102)
T ss_dssp EEEEEECSSEEEEEE-----SSSEEEEECTT
T ss_pred EEEEEeccceEEEEe-----CCcEEEEECCC
Confidence 579999999999986 46889999998
No 33
>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}
Probab=20.32 E-value=1e+02 Score=20.60 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=23.6
Q ss_pred eecccc-cCccEEEEcCeEEEEeeCCCCCCeEEEEEeecC
Q 029617 83 KIIAKE-IPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFR 121 (190)
Q Consensus 83 ~Ii~~e-~p~~IVyEde~~vaf~d~~P~~pgHvLVIPKrH 121 (190)
++.+|+ ..+.+.+.|.+|+++.+.+ ++-.+|.|..
T Consensus 29 ~L~tGd~l~G~i~WQD~~cl~L~~~~----~~~~LI~R~A 64 (72)
T 3hfn_A 29 KLVTGDAITGRVLWQDPTCVCIADEN----SRQTTIWKQA 64 (72)
T ss_dssp EETTSCEEEEEEEEECSSEEEEEC-------CEEEEEGGG
T ss_pred EecCCCEEEEEEEEECCCEEEEEcCC----CCeEEEEeee
Confidence 345554 3478999999999999766 4456667665
Done!