Query 029629
Match_columns 190
No_of_seqs 213 out of 1620
Neff 9.2
Searched_HMMs 29240
Date Tue Mar 26 02:30:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z2w_A Vacuolar protein sortin 100.0 1.3E-39 4.6E-44 245.0 24.7 183 1-183 10-192 (192)
2 2a22_A Vacuolar protein sortin 100.0 2.5E-38 8.7E-43 242.1 25.1 181 2-182 26-215 (215)
3 3ck2_A Conserved uncharacteriz 100.0 1.8E-33 6.2E-38 208.7 14.6 169 1-180 6-174 (176)
4 2kkn_A Uncharacterized protein 100.0 1.2E-32 4.1E-37 204.8 17.8 154 1-168 22-178 (178)
5 3qfm_A SAPH, putative uncharac 100.0 6.1E-30 2.1E-34 201.8 15.2 165 1-169 11-230 (270)
6 1s3l_A Hypothetical protein MJ 100.0 1.6E-29 5.6E-34 189.7 13.4 147 1-162 25-186 (190)
7 1su1_A Hypothetical protein YF 100.0 4.4E-28 1.5E-32 184.3 14.2 160 1-178 25-205 (208)
8 1nnw_A Hypothetical protein; s 100.0 3.5E-28 1.2E-32 189.3 14.0 160 1-168 1-222 (252)
9 3rqz_A Metallophosphoesterase; 99.9 7.1E-27 2.4E-31 181.8 9.7 155 1-168 3-218 (246)
10 1uf3_A Hypothetical protein TT 99.9 1.1E-25 3.7E-30 171.8 12.7 152 1-168 5-227 (228)
11 3ib7_A ICC protein; metallopho 99.9 8E-24 2.7E-28 170.0 19.5 170 2-171 26-281 (330)
12 2yvt_A Hypothetical protein AQ 99.9 2.1E-24 7.2E-29 168.2 13.7 149 1-163 5-256 (260)
13 3d03_A Phosphohydrolase; glyce 99.9 1.2E-23 3.9E-28 164.8 18.0 168 2-169 1-255 (274)
14 1xm7_A Hypothetical protein AQ 99.9 2.5E-24 8.7E-29 161.8 12.7 137 2-138 2-174 (195)
15 3av0_A DNA double-strand break 99.9 6E-23 2E-27 169.3 13.8 175 1-180 20-274 (386)
16 4fbk_A DNA repair and telomere 99.9 2.4E-22 8.2E-27 167.6 17.2 182 1-183 76-381 (472)
17 3t1i_A Double-strand break rep 99.9 5.7E-23 2E-27 170.5 12.5 182 1-183 32-337 (431)
18 4fbw_A DNA repair protein RAD3 99.9 2.1E-22 7.2E-27 166.5 14.9 182 1-183 13-318 (417)
19 1g5b_A Serine/threonine protei 99.9 4.2E-22 1.4E-26 152.4 8.9 133 1-138 12-208 (221)
20 2q8u_A Exonuclease, putative; 99.9 4.4E-21 1.5E-25 155.3 14.0 175 1-178 18-289 (336)
21 2nxf_A Putative dimetal phosph 99.8 2.1E-19 7.3E-24 143.0 17.7 68 97-169 245-314 (322)
22 3tho_B Exonuclease, putative; 99.8 8.2E-20 2.8E-24 150.2 15.5 174 2-179 1-272 (379)
23 2xmo_A LMO2642 protein; phosph 99.8 1.9E-19 6.6E-24 150.4 16.9 81 81-169 237-333 (443)
24 3rl5_A Metallophosphoesterase 99.8 3.2E-19 1.1E-23 141.4 16.8 129 2-140 60-279 (296)
25 1ute_A Protein (II purple acid 99.8 4.3E-19 1.5E-23 140.9 15.2 181 2-184 7-304 (313)
26 1ii7_A MRE11 nuclease; RAD50, 99.8 5.9E-19 2E-23 142.7 16.2 170 2-179 1-279 (333)
27 2qjc_A Diadenosine tetraphosph 99.7 4.7E-17 1.6E-21 127.5 7.6 144 2-160 19-240 (262)
28 3tgh_A Glideosome-associated p 99.7 1.1E-15 3.7E-20 123.9 15.8 85 99-184 216-308 (342)
29 1xzw_A Purple acid phosphatase 99.6 1.4E-13 4.8E-18 114.5 17.0 179 2-183 127-422 (426)
30 2qfp_A Purple acid phosphatase 99.5 2.5E-12 8.5E-17 106.9 16.1 180 2-184 120-416 (424)
31 2z72_A Protein-tyrosine-phosph 99.4 8.9E-13 3E-17 106.9 10.9 63 1-66 70-152 (342)
32 1wao_1 Serine/threonine protei 99.4 1.2E-11 4.2E-16 104.2 15.5 156 2-169 213-455 (477)
33 2dfj_A Diadenosinetetraphospha 99.4 1.1E-12 3.7E-17 103.5 8.2 63 2-67 1-69 (280)
34 3h63_A Serine/threonine-protei 99.2 4.5E-10 1.5E-14 89.6 14.8 157 2-169 60-302 (315)
35 1hp1_A 5'-nucleotidase; metall 99.2 1.8E-09 6E-14 91.9 17.9 65 2-67 9-95 (516)
36 2ie4_C PP2A-alpha;, serine/thr 99.2 1.5E-09 5.1E-14 86.6 15.8 63 2-67 50-121 (309)
37 3qfk_A Uncharacterized protein 99.1 3.8E-09 1.3E-13 90.1 16.3 32 107-138 238-269 (527)
38 3e7a_A PP-1A, serine/threonine 99.1 2E-09 6.8E-14 85.3 13.4 116 2-123 56-254 (299)
39 1fjm_A Protein serine/threonin 99.0 1.6E-09 5.5E-14 87.0 10.8 63 2-67 57-128 (330)
40 3icf_A PPT, serine/threonine-p 99.0 3.2E-09 1.1E-13 85.3 12.3 116 2-123 64-263 (335)
41 1aui_A Calcineurin, serine/thr 99.0 1E-08 3.5E-13 86.2 13.8 63 2-67 83-154 (521)
42 3ive_A Nucleotidase; structura 98.9 4.1E-08 1.4E-12 83.4 16.6 32 107-138 224-257 (509)
43 2z1a_A 5'-nucleotidase; metal- 98.9 3.9E-08 1.3E-12 84.3 15.6 65 2-67 30-119 (552)
44 3ll8_A Serine/threonine-protei 98.9 1.9E-08 6.5E-13 81.3 12.5 63 2-67 70-141 (357)
45 2wdc_A SOXB, sulfur oxidation 98.9 1.7E-07 5.8E-12 80.5 17.4 119 32-161 123-324 (562)
46 3ztv_A NAD nucleotidase, NADN; 98.8 1.5E-07 5E-12 81.2 15.7 65 2-67 13-106 (579)
47 3e0j_A DNA polymerase subunit 98.7 1.6E-07 5.6E-12 78.4 12.3 149 3-160 202-453 (476)
48 4h2g_A 5'-nucleotidase; dimer, 98.7 6.8E-07 2.3E-11 76.5 15.4 65 2-67 26-118 (546)
49 3jyf_A 2',3'-cyclic nucleotide 98.6 1.5E-06 5.2E-11 70.1 14.1 33 106-138 232-278 (339)
50 3gve_A YFKN protein; alpha-bet 98.5 4E-06 1.4E-10 67.7 13.7 32 107-138 240-285 (341)
51 2yeq_A Apased, PHOD, alkaline 98.4 2.9E-05 9.8E-10 66.2 18.7 72 99-170 361-461 (527)
52 4h1s_A 5'-nucleotidase; hydrol 98.4 8.6E-06 2.9E-10 69.4 15.5 65 2-67 4-96 (530)
53 1t71_A Phosphatase, conserved 98.3 1.7E-06 5.9E-11 67.8 7.1 130 2-132 5-202 (281)
54 3c9f_A 5'-nucleotidase; 2',3'- 98.3 2.5E-05 8.5E-10 67.0 14.9 65 2-67 16-107 (557)
55 3flo_A DNA polymerase alpha su 97.9 0.00091 3.1E-08 55.7 15.9 47 108-159 382-428 (460)
56 1t70_A Phosphatase; crystal, X 97.7 0.00029 9.8E-09 54.5 10.1 63 2-67 1-69 (255)
57 2z06_A Putative uncharacterize 97.7 0.00058 2E-08 52.6 11.2 128 2-132 1-189 (252)
58 2d00_A V-type ATP synthase sub 90.5 0.29 9.8E-06 32.5 3.8 64 2-65 4-84 (109)
59 3aon_B V-type sodium ATPase su 90.5 0.15 5.2E-06 34.2 2.4 66 1-67 2-83 (115)
60 2ov6_A V-type ATP synthase sub 83.3 0.48 1.6E-05 30.9 1.6 63 2-64 1-81 (101)
61 3dnf_A ISPH, LYTB, 4-hydroxy-3 78.5 2.3 7.9E-05 33.2 4.2 78 32-122 31-127 (297)
62 3sk3_A Acetate kinase, acetoki 62.0 4.8 0.00016 33.0 2.7 35 115-160 7-42 (415)
63 2r7a_A Bacterial heme binding 57.4 15 0.00051 27.2 4.7 34 29-62 57-90 (256)
64 3md9_A Hemin-binding periplasm 55.2 17 0.00058 26.9 4.7 34 29-62 57-90 (255)
65 2vvr_A Ribose-5-phosphate isom 54.8 6.6 0.00022 27.4 2.1 34 1-39 1-34 (149)
66 4hwg_A UDP-N-acetylglucosamine 54.3 8.6 0.00029 30.9 3.1 43 21-63 84-126 (385)
67 1n2z_A Vitamin B12 transport p 53.5 21 0.0007 26.3 4.9 33 30-62 56-88 (245)
68 2r79_A Periplasmic binding pro 51.0 21 0.00074 26.9 4.8 34 29-62 57-90 (283)
69 3cpq_A 50S ribosomal protein L 44.8 51 0.0017 21.3 5.2 42 22-64 28-73 (110)
70 3psh_A Protein HI_1472; substr 43.6 37 0.0013 26.1 5.1 34 30-64 83-116 (326)
71 3v7e_A Ribosome-associated pro 40.9 54 0.0019 19.9 4.6 43 22-65 18-64 (82)
72 3jyw_G 60S ribosomal protein L 40.8 51 0.0018 21.6 4.7 46 21-66 31-80 (113)
73 1w41_A 50S ribosomal protein L 40.8 57 0.0019 20.6 4.9 41 22-63 23-67 (101)
74 2e1z_A Propionate kinase; TDCD 40.4 12 0.00041 30.7 1.8 25 124-159 16-40 (415)
75 2i4r_A V-type ATP synthase sub 39.3 14 0.00049 23.8 1.7 49 18-66 40-92 (102)
76 1ilo_A Conserved hypothetical 39.0 46 0.0016 18.8 4.0 56 1-60 1-56 (77)
77 2vqe_B 30S ribosomal protein S 38.7 44 0.0015 25.4 4.6 29 30-58 157-185 (256)
78 2pln_A HP1043, response regula 37.5 39 0.0013 21.6 3.9 36 29-65 60-97 (137)
79 3bbn_B Ribosomal protein S2; s 37.4 59 0.002 24.3 5.1 30 31-60 157-186 (231)
80 2xzm_U Ribosomal protein L7AE 37.4 52 0.0018 21.9 4.4 44 23-66 32-79 (126)
81 3j21_Z 50S ribosomal protein L 36.1 63 0.0021 20.3 4.5 44 22-66 22-69 (99)
82 4a17_F RPL7A, 60S ribosomal pr 36.0 70 0.0024 24.2 5.3 46 21-66 130-179 (255)
83 3dzc_A UDP-N-acetylglucosamine 33.7 25 0.00086 28.1 2.8 41 22-62 102-143 (396)
84 4hn9_A Iron complex transport 33.4 40 0.0014 26.1 3.9 31 29-61 114-144 (335)
85 3ot5_A UDP-N-acetylglucosamine 31.6 29 0.001 27.8 2.8 41 22-62 105-146 (403)
86 3j20_B 30S ribosomal protein S 31.1 89 0.003 22.8 5.1 29 30-58 110-138 (202)
87 4em8_A Ribose 5-phosphate isom 30.9 15 0.00053 25.5 0.9 29 1-33 7-35 (148)
88 2lbw_A H/ACA ribonucleoprotein 30.6 55 0.0019 21.5 3.6 44 23-66 28-75 (121)
89 2zkq_b 40S ribosomal protein S 30.3 93 0.0032 24.1 5.3 29 30-58 117-145 (295)
90 3bch_A 40S ribosomal protein S 30.0 96 0.0033 23.5 5.2 30 30-59 150-179 (253)
91 2kqs_B Death domain-associated 30.0 21 0.00071 16.9 1.0 10 3-12 14-23 (26)
92 3hcw_A Maltose operon transcri 29.7 87 0.003 23.2 5.1 41 23-63 60-100 (295)
93 3f6c_A Positive transcription 29.1 1.1E+02 0.0037 19.1 5.1 11 1-11 1-11 (134)
94 2xzm_B RPS0E; ribosome, transl 28.9 88 0.003 23.5 4.8 30 30-59 113-142 (241)
95 3k4h_A Putative transcriptiona 28.8 83 0.0028 23.1 4.9 41 24-64 62-102 (292)
96 3c48_A Predicted glycosyltrans 28.3 21 0.0007 28.4 1.4 12 1-12 20-31 (438)
97 3gv0_A Transcriptional regulat 28.3 66 0.0022 23.8 4.2 40 23-62 58-97 (288)
98 3w01_A Heptaprenylglyceryl pho 28.2 1.4E+02 0.0048 22.2 5.9 46 21-67 27-77 (235)
99 2vvp_A Ribose-5-phosphate isom 28.1 12 0.00041 26.5 -0.1 34 1-39 3-36 (162)
100 1vi6_A 30S ribosomal protein S 28.1 1.2E+02 0.004 22.2 5.3 31 30-60 114-144 (208)
101 3huu_A Transcription regulator 27.1 92 0.0032 23.2 4.9 42 23-64 75-116 (305)
102 2yq5_A D-isomer specific 2-hyd 26.8 87 0.003 24.7 4.7 33 30-62 44-78 (343)
103 2aif_A Ribosomal protein L7A; 26.6 1.2E+02 0.0042 20.3 4.9 43 23-65 49-95 (135)
104 3kke_A LACI family transcripti 26.6 1.5E+02 0.0051 22.0 6.0 38 25-63 65-103 (303)
105 3kjx_A Transcriptional regulat 25.3 1.5E+02 0.005 22.6 5.8 32 29-60 122-153 (344)
106 3h75_A Periplasmic sugar-bindi 25.1 81 0.0028 24.1 4.3 43 21-63 51-95 (350)
107 2hqr_A Putative transcriptiona 25.1 1.2E+02 0.0042 21.2 5.1 40 26-66 39-80 (223)
108 3iz5_f 60S ribosomal protein L 25.0 1.3E+02 0.0046 19.4 4.7 45 22-67 33-81 (112)
109 3jy6_A Transcriptional regulat 24.9 1.3E+02 0.0044 21.9 5.3 34 27-61 59-92 (276)
110 3qk7_A Transcriptional regulat 24.8 84 0.0029 23.3 4.2 40 23-62 57-96 (294)
111 2iuy_A Avigt4, glycosyltransfe 24.7 25 0.00087 26.8 1.2 65 1-65 3-95 (342)
112 3tlk_A Ferrienterobactin-bindi 24.6 80 0.0027 24.1 4.2 34 29-63 113-148 (326)
113 2x4l_A Ferric-siderophore rece 24.3 73 0.0025 24.4 3.9 33 30-63 109-148 (325)
114 3on1_A BH2414 protein; structu 24.0 1.3E+02 0.0044 18.8 4.4 43 22-65 25-71 (101)
115 3k7p_A Ribose 5-phosphate isom 23.3 43 0.0015 24.0 2.1 33 2-39 23-57 (179)
116 2ebj_A Pyrrolidone carboxyl pe 23.3 39 0.0013 24.4 1.9 20 20-39 46-65 (192)
117 1rdu_A Conserved hypothetical 23.1 33 0.0011 22.1 1.4 32 100-131 54-87 (116)
118 3r5t_A Ferric vibriobactin ABC 23.1 70 0.0024 24.2 3.5 33 30-63 85-119 (305)
119 2phj_A 5'-nucleotidase SURE; S 22.9 58 0.002 24.6 2.9 36 1-40 1-36 (251)
120 2ale_A SNU13, NHP2/L7AE family 22.7 1E+02 0.0034 20.8 3.8 43 24-66 41-87 (134)
121 3v7q_A Probable ribosomal prot 22.4 1.5E+02 0.0052 18.5 5.0 42 22-63 26-70 (101)
122 3e3m_A Transcriptional regulat 22.3 1.4E+02 0.0047 22.8 5.2 32 29-60 124-155 (355)
123 4e7p_A Response regulator; DNA 22.0 1.7E+02 0.0057 18.8 6.1 39 27-65 62-105 (150)
124 3u5c_A 40S ribosomal protein S 21.9 1.7E+02 0.0057 22.2 5.2 29 30-58 116-144 (252)
125 2gek_A Phosphatidylinositol ma 21.9 28 0.00097 27.1 1.0 11 1-11 20-30 (406)
126 3d8u_A PURR transcriptional re 21.7 1.4E+02 0.0049 21.5 5.0 33 29-61 57-89 (275)
127 3giu_A Pyrrolidone-carboxylate 21.4 33 0.0011 25.3 1.2 21 20-40 51-71 (215)
128 3hdg_A Uncharacterized protein 21.3 1.2E+02 0.004 19.1 4.0 37 29-65 49-90 (137)
129 3nhm_A Response regulator; pro 21.1 1.6E+02 0.0054 18.3 5.0 40 27-66 43-89 (133)
130 2lpm_A Two-component response 21.0 92 0.0031 20.4 3.3 40 26-67 48-92 (123)
131 2rgy_A Transcriptional regulat 20.9 2.5E+02 0.0085 20.5 6.4 33 29-61 65-97 (290)
132 3gfv_A Uncharacterized ABC tra 20.8 62 0.0021 24.4 2.8 31 29-62 93-123 (303)
133 1efd_N Ferrichrome-binding per 20.8 47 0.0016 24.5 2.0 29 30-61 65-93 (266)
134 2q8p_A Iron-regulated surface 20.8 52 0.0018 24.2 2.3 32 30-62 59-90 (260)
135 2wi8_A Iron-uptake system-bind 20.6 97 0.0033 23.5 3.9 31 30-62 95-125 (311)
136 3lhs_A Ferrichrome ABC transpo 20.6 90 0.0031 23.3 3.7 33 29-63 83-115 (296)
137 2ll1_A U1-TRTX-SP1A; toxin; NM 20.5 31 0.0011 16.6 0.6 9 114-122 2-10 (33)
138 3h5o_A Transcriptional regulat 20.5 1.7E+02 0.0059 22.1 5.4 33 28-60 115-147 (339)
139 2jnb_A NHP2-like protein 1; sp 20.5 55 0.0019 22.4 2.1 41 26-66 61-105 (144)
140 3eod_A Protein HNR; response r 20.2 1.6E+02 0.0056 18.1 6.0 40 27-66 47-91 (130)
No 1
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=100.00 E-value=1.3e-39 Score=245.04 Aligned_cols=183 Identities=62% Similarity=1.120 Sum_probs=161.8
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCCCCCCCCCcceEEEeCC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQ 80 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~~~p~~~~~~~~~ 80 (190)
||||+++||+|++.....+.+++.+++++.++|.|+++||+++.++++.|+++..|+++|+||||....+|....++.++
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~~~~~~l~~~~~~~~~v~GNhD~~~~lp~~~~~~~~~ 89 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQ 89 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSHHHHHHHHHHCSEEEECCCTTCCCTTSCSEEEEEETT
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCHHHHHHHHhcCCCEEEEcCCcCccccCCcceEEEECC
Confidence 89999999999865444556777777766789999999999999999999998778999999999988899988899999
Q ss_pred EEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCE
Q 029629 81 FKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLR 160 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~ 160 (190)
.+|+++||++..++.+.+.+..+++..+++++++||+|.+.....+++.++||||++.++.++.....++|+++++++++
T Consensus 90 ~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~~ 169 (192)
T 1z2w_A 90 FKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQAST 169 (192)
T ss_dssp EEEEEECSCCCCBTTCHHHHHHHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTE
T ss_pred EEEEEECCCcCCCCCCHHHHHHHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCCcCCCCcEEEEEEECCE
Confidence 99999999998777777888777777899999999999999888899999999999987655555678999999999999
Q ss_pred EEEEEEEeeCCeEEEEEEEeecc
Q 029629 161 VVVYVYELIDGEVKVDKIDFKKT 183 (190)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~ 183 (190)
+++++++++.+++.+.++.|+|.
T Consensus 170 ~~~~~~~~~~~~~~v~~~~~~~~ 192 (192)
T 1z2w_A 170 VVTYVYQLIGDDVKVERIEYKKS 192 (192)
T ss_dssp EEEEEEEEETTEEEEEEEEEECC
T ss_pred EEEEEEEccCCEEEEEEEEEccC
Confidence 99999999999999999999873
No 2
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=100.00 E-value=2.5e-38 Score=242.06 Aligned_cols=181 Identities=45% Similarity=0.843 Sum_probs=158.0
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCCCCCC---------CCCc
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDS---------RYPE 72 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~---------~~p~ 72 (190)
|||+++||+|++.....+.+.+.+++++.++|.|+++||+++.++++.|+++..|+++|+||||... .+|.
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~~~l~~l~~~~~~v~~V~GNHD~~~~~~~~~~~~~lp~ 105 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQEYVEMLKNITKNVYIVSGDLDSAIFNPDPESNGVFPE 105 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCHHHHHHHHHHCSCEEECCCTTCCSCCBCCGGGTBCCCS
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHHcCCCEEEecCCCcCcccccChhhHhhCCc
Confidence 8999999999975443455666666556789999999999999999999998878999999999865 5677
Q ss_pred ceEEEeCCEEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEE
Q 029629 73 TKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFV 152 (190)
Q Consensus 73 ~~~~~~~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ 152 (190)
...++.++.+|+++||++..++.+.+.+..+++..+++++++||+|.+.....+++.++||||++.++.++.....++|+
T Consensus 106 ~~~~~~~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~ 185 (215)
T 2a22_A 106 YVVVQIGEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAPPSFM 185 (215)
T ss_dssp EEEEEETTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTSTTCCCEEE
T ss_pred eEEEecCCeEEEEEcCCccCCCCCHHHHHHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCCCCCCCcEE
Confidence 77788899999999999987777778887777778999999999999998888999999999999876555566789999
Q ss_pred EEEEeCCEEEEEEEEeeCCeEEEEEEEeec
Q 029629 153 LMDIDGLRVVVYVYELIDGEVKVDKIDFKK 182 (190)
Q Consensus 153 ll~i~~~~~~~~~~~l~~~~~~~~~~~~~~ 182 (190)
+++++++++++++++++++++++.++.|+|
T Consensus 186 il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 186 LMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp EEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 999999999999999999999999999986
No 3
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=100.00 E-value=1.8e-33 Score=208.72 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=135.0
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCCCCCCCCCcceEEEeCC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQ 80 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~~~p~~~~~~~~~ 80 (190)
||||+++||+|++. ...+++.+.+++ ++|.|+++||+.. + .++++..|+++|+||||....+|....+++++
T Consensus 6 ~m~i~~isD~H~~~---~~~~~~~~~~~~-~~d~i~~~GD~~~-~---~l~~l~~~~~~v~GNhD~~~~~p~~~~~~~~~ 77 (176)
T 3ck2_A 6 KQTIIVMSDSHGDS---LIVEEVRDRYVG-KVDAVFHNGDSEL-R---PDSPLWEGIRVVKGNMDFYAGYPERLVTELGS 77 (176)
T ss_dssp CEEEEEECCCTTCH---HHHHHHHHHHTT-TSSEEEECSCCCS-C---TTCGGGTTEEECCCTTCCSTTCCSEEEEEETT
T ss_pred CcEEEEEecCCCCH---HHHHHHHHHhhc-CCCEEEECCCCch-H---HHHhhhCCeEEecCcccchhcCCcEEEEEECC
Confidence 69999999999742 223344444444 8999999999843 2 23333348999999999988899988899999
Q ss_pred EEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCE
Q 029629 81 FKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLR 160 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~ 160 (190)
.+++++||++..+..+.+.+.++++..+++++++||+|.+.....+++.++||||++.++ .....++|++++++++.
T Consensus 78 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~---~~~~~~~y~il~~~~~~ 154 (176)
T 3ck2_A 78 TKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPR---GTIRECLYARVEIDDSY 154 (176)
T ss_dssp EEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCC---TTCCSCCEEEEEECSSE
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcCC---CCCCCCeEEEEEEcCCE
Confidence 999999999877666677787777788999999999999999888999999999999753 33334899999999999
Q ss_pred EEEEEEEeeCCeEEEEEEEe
Q 029629 161 VVVYVYELIDGEVKVDKIDF 180 (190)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~ 180 (190)
++++++++++.++......|
T Consensus 155 ~~v~~~~~~~~~~~~~~~~~ 174 (176)
T 3ck2_A 155 FKVDFLTRDHEVYPGLSKEF 174 (176)
T ss_dssp EEEEEECTTSCBCTTCCEEE
T ss_pred EEEEEEEECCEEcchhhccc
Confidence 99999999876665444444
No 4
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=100.00 E-value=1.2e-32 Score=204.77 Aligned_cols=154 Identities=25% Similarity=0.428 Sum_probs=125.1
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCCCCC---CCCCcceEEE
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDED---SRYPETKTLT 77 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~---~~~p~~~~~~ 77 (190)
||||+++||+|+......+.+.+.++. .++|.|+++||+++.++++.|+++..|+++|+||||.. ..+|....++
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~--~~~D~ii~~GD~~~~~~~~~l~~~~~~v~~V~GNhD~~~~~~~lp~~~~~~ 99 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL--KEYDGVIGLGDYVDLDTVILLEKFSKEFYGVHGNMDYPDVKEHLPFSKVLL 99 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG--GGCSEEEESSCBSCHHHHHHHHHHTSSEEECCCSSSCGGGGGTSCSCEEEE
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh--cCCCEEEECCCCCCHHHHHHHHhcCCCEEEEECCCCcHHHHhhCCcceEEE
Confidence 899999999996333345556666544 67999999999999999999999877899999999984 3688888899
Q ss_pred eCCEEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEe
Q 029629 78 IGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDID 157 (190)
Q Consensus 78 ~~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~ 157 (190)
+++.+|+++||++. +....+.+.+.++ .+++++++||||.+.....+++.++||||++. ++|++++++
T Consensus 100 ~~g~~i~l~HG~~~-~~~~~~~~~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~----------~sy~il~~~ 167 (178)
T 2kkn_A 100 VEGVTIGMCHGWGA-PWDLKDRLLKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE----------GSYAVLELD 167 (178)
T ss_dssp ETTEEEEECCSCCC-HHHHHHHHHHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT----------TEEEEEEEE
T ss_pred ECCEEEEEECCCCC-CCCHHHHHHHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC----------CeEEEEEEC
Confidence 99999999999853 1111112222333 68999999999999988889999999999973 799999999
Q ss_pred CCEEEEEEEEe
Q 029629 158 GLRVVVYVYEL 168 (190)
Q Consensus 158 ~~~~~~~~~~l 168 (190)
+++++++++++
T Consensus 168 ~~~~~~~~~~l 178 (178)
T 2kkn_A 168 GGEVRFELKTL 178 (178)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 99999988865
No 5
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.97 E-value=6.1e-30 Score=201.77 Aligned_cols=165 Identities=19% Similarity=0.255 Sum_probs=129.0
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEeccCCCCCC-------
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSLCPDLHVTRGEYDEDS------- 68 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~------- 68 (190)
|.||+++||+|++. ..+ +++.+.+++.++|.|+++||+++ .++++.|+++. |+++|+||||...
T Consensus 11 ~~~i~~iSDiHg~~--~~l-~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~~~ 86 (270)
T 3qfm_A 11 MTKIALLSDIHGNT--TAL-EAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-ITARVLGNWEDSLWHGVRKE 86 (270)
T ss_dssp CEEEEEECCCTTCH--HHH-HHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-EEEECCCHHHHHHHHHHTTC
T ss_pred ccEEEEEecCCCCH--HHH-HHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-CEEEEcCChHHHHHHhhccc
Confidence 68999999999853 233 33334444568999999999998 48899999874 7999999999651
Q ss_pred -------------------------------CCCcceEEEeCCEEEEEeeCCccCC-------CCCHHHHHHHhhccCcc
Q 029629 69 -------------------------------RYPETKTLTIGQFKLGICHGHQVIP-------WGDLDSLAMLQRQLDVD 110 (190)
Q Consensus 69 -------------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~ 110 (190)
.+|....+++++.+|+++||++..+ ....+.+.++++..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d 166 (270)
T 3qfm_A 87 LDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCD 166 (270)
T ss_dssp SCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCS
T ss_pred cCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCC
Confidence 3566667788999999999987533 23445677777778999
Q ss_pred EEEeCCCCCcceEEE-cCeEEEccCCccCCCCCCC---CCCCCeEEEEEEeCCE-EEEEEEEee
Q 029629 111 ILVTGHTHQFKAYKH-EGGVVINPGSATGAYSSFT---FDVNPSFVLMDIDGLR-VVVYVYELI 169 (190)
Q Consensus 111 ~vi~GHtH~~~~~~~-~~~~~inpGs~~~~~~~~~---~~~~~~~~ll~i~~~~-~~~~~~~l~ 169 (190)
+++|||||.+..... +++.++||||+|.|+.... .+..++|+++++++++ ++++++++.
T Consensus 167 ~~i~GHtH~~~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~~~rv~ 230 (270)
T 3qfm_A 167 IAVYGHIHQQLLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRVD 230 (270)
T ss_dssp EEECCSSCSEEEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEECCcCchHheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEEEEEeC
Confidence 999999999988774 7899999999998753321 1357899999999876 688888875
No 6
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.96 E-value=1.6e-29 Score=189.68 Aligned_cols=147 Identities=20% Similarity=0.290 Sum_probs=113.2
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCCCCCCC------CC---
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSR------YP--- 71 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNHD~~~~------~p--- 71 (190)
||||+++||+|++. .. .+++.+.+++.++|.|+++||++++++++.|+++..|+++|+||||.... .|
T Consensus 25 ~m~i~~iSD~Hg~~--~~-l~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l~~l~~~~~~V~GNhD~~~~~~~~~~~~~~~ 101 (190)
T 1s3l_A 25 HMKIGIMSDTHDHL--PN-IRKAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERCKLKEWLKDINE 101 (190)
T ss_dssp -CEEEEECCCTTCH--HH-HHHHHHHHHHSCCSEEEECSCCCSTHHHHHGGGCSSEEEEECCTTCCCHHHHHHHHHHHCT
T ss_pred CeEEEEEeeCCCCH--HH-HHHHHHHHhhcCCCEEEECCCCCCHHHHHHHHhcCCCEEEEeCCCcchHHHHHHHhcccCh
Confidence 79999999999642 22 23333434456899999999999988889998876789999999998632 11
Q ss_pred -----cceEEEeCCEEEEEeeCCccCCCCCHHHHHHHhhcc-CccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCC
Q 029629 72 -----ETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQL-DVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTF 145 (190)
Q Consensus 72 -----~~~~~~~~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~-~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~ 145 (190)
....++.++.+|+++||++.. +.+.+++. +++++++||||.+.....+++.++||||++. + .
T Consensus 102 ~~l~~~~~~~~~~~~~ill~Hg~~~~-------l~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r----~ 169 (190)
T 1s3l_A 102 ENIIDDFISVEIDDLKFFITHGHHQS-------VLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-Y----L 169 (190)
T ss_dssp TCEEESEEEEEETTEEEEEEESCCHH-------HHHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-T----T
T ss_pred hhhcccceEEeeCCcEEEEECCChHH-------HHHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-c----C
Confidence 124567789999999997642 33344444 8999999999999998899999999999985 3 2
Q ss_pred CCCCeEEEEEEeCCEEE
Q 029629 146 DVNPSFVLMDIDGLRVV 162 (190)
Q Consensus 146 ~~~~~~~ll~i~~~~~~ 162 (190)
..+++|+++++++++++
T Consensus 170 ~~~~~y~il~~~~~~v~ 186 (190)
T 1s3l_A 170 TGIPTIGILDTEKKEYR 186 (190)
T ss_dssp TSCCEEEEEETTTTEEE
T ss_pred CCCCEEEEEEcCCCcEE
Confidence 34699999999887654
No 7
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.96 E-value=4.4e-28 Score=184.31 Aligned_cols=160 Identities=22% Similarity=0.290 Sum_probs=118.5
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-------------HHHHHHHhhhCCcEEEeccCCCCC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-------------KEVHDYLKSLCPDLHVTRGEYDED 67 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-------------~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
||||+++||+|++. ...+++.+.+++.++|.|+++||+++ .++++.|+++..|+++|+||||..
T Consensus 25 mmki~~iSD~H~~~---~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 25 MMKLMFASDIHGSL---PATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 101 (208)
T ss_dssp CCEEEEECCCTTBH---HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred cEEEEEEEcCCCCH---HHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCchH
Confidence 89999999999752 22334444444467999999999985 456788888766899999999975
Q ss_pred C-----CCC---cceEEEeCCEEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCC
Q 029629 68 S-----RYP---ETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGA 139 (190)
Q Consensus 68 ~-----~~p---~~~~~~~~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~ 139 (190)
. .+| ....++.++.+|+++||++..+. .+.. ....+++++||||.+.....+++.++||||++.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~~i~l~Hg~~~~~~----~l~~---~~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~p 174 (208)
T 1su1_A 102 VDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPE----NLPA---LNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIP 174 (208)
T ss_dssp HHHHHSSSCCCCSEEEEECSSCEEEEECSSSSBTT----BCCC---CCTTCEEECCSSCCCEEEEETTEEEEECCCSSCC
T ss_pred HHHhhhhccccCceEEEEECCcEEEEECCCCCCcc----hhhh---hcCCCEEEECCcccCccEEeCCEEEEECCCCcCC
Confidence 2 333 45567889999999999876431 1111 1245999999999999888899999999999975
Q ss_pred CCCCCCCCCCeEEEEEEeCCEEEEEEEEeeCCeEEEEEE
Q 029629 140 YSSFTFDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 178 (190)
Q Consensus 140 ~~~~~~~~~~~~~ll~i~~~~~~~~~~~l~~~~~~~~~~ 178 (190)
+ . ..+++|++++. + +++++++++.++....+
T Consensus 175 r---~-~~~~sy~il~~--~--~~~~~~~~~~~~~~~~~ 205 (208)
T 1su1_A 175 K---G-GNPASYGMLDN--D--VLSVIALNDQSIIAQVA 205 (208)
T ss_dssp C---T-TCCCEEEEEET--T--EEEEEETTTCCEEEEEE
T ss_pred C---C-CCCCEEEEEEC--C--eEEEEEeCCCEEEEEec
Confidence 3 2 34689999994 3 56788887666555443
No 8
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.96 E-value=3.5e-28 Score=189.28 Aligned_cols=160 Identities=23% Similarity=0.272 Sum_probs=117.3
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhC---CC--CccEEEEcCCCCC-----HHHHHHHhhhC--CcEEEeccCCCCCC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLV---PG--KIQHIICTGNLSI-----KEVHDYLKSLC--PDLHVTRGEYDEDS 68 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~---~~--~~D~vi~~GDl~~-----~~~~~~l~~l~--~~~~~v~GNHD~~~ 68 (190)
||||+++||+|++. ..+ +++.+.++ .. ++|.|+++||+++ .++++.|+++. .++++|+||||...
T Consensus 1 mm~i~~isD~H~~~--~~l-~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~~ 77 (252)
T 1nnw_A 1 MVYVAVLANIAGNL--PAL-TAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQII 77 (252)
T ss_dssp -CEEEEEECCTTCH--HHH-HHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHH
T ss_pred CcEEEEEeecCCCH--HHH-HHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHHh
Confidence 99999999999752 223 33333333 34 7999999999997 36778888764 57999999999642
Q ss_pred ------------------------------------------CCCcceEEEeCCEEEEEeeCCccCCC-------CCHHH
Q 029629 69 ------------------------------------------RYPETKTLTIGQFKLGICHGHQVIPW-------GDLDS 99 (190)
Q Consensus 69 ------------------------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~-------~~~~~ 99 (190)
.+|.....++++.+++++||++..+. .+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~ 157 (252)
T 1nnw_A 78 AMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSY 157 (252)
T ss_dssp HHSCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHH
T ss_pred hccccccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHH
Confidence 23444455678889999999873221 12356
Q ss_pred HHHHhhcc-CccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEe
Q 029629 100 LAMLQRQL-DVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYEL 168 (190)
Q Consensus 100 ~~~~~~~~-~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l 168 (190)
+.++++.. ++++++|||||.+.....+++.++||||++.+ +.+...++|+++++++..+ +++++
T Consensus 158 l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~in~Gs~~~~---~~~~~~~~y~il~~~~~~v--~~~~v 222 (252)
T 1nnw_A 158 YEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFP---PGKEHKATFALVDVDTLKP--KFIEV 222 (252)
T ss_dssp HHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSSC---SSSSCCEEEEEEETTTCCE--EEEEE
T ss_pred HHHHHhcCCCCCEEEECCccccceEecCCeEEEECCCccCC---CCCCCcceEEEEECCCCeE--EEEEe
Confidence 77777776 89999999999999988999999999999875 3344568999999876444 44444
No 9
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.94 E-value=7.1e-27 Score=181.77 Aligned_cols=155 Identities=21% Similarity=0.251 Sum_probs=113.2
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEeccCCCCCCC--CC--
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSLCPDLHVTRGEYDEDSR--YP-- 71 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~~--~p-- 71 (190)
||||+++||+|++. ..+ +++.+.+. ++|.++++||+++ .++++.|+++. .+++|+||||.... .+
T Consensus 3 ~mri~~isDiHg~~--~~l-~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~~~ 76 (246)
T 3rqz_A 3 AMRILIISDVHANL--VAL-EAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLA-PNISVIGNHDWACIGRLSLD 76 (246)
T ss_dssp CCCEEEECCCTTCH--HHH-HHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-SSEECCCHHHHHHTCCCCCC
T ss_pred CcEEEEEeecCCCH--HHH-HHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-CCEEEeCchHHHHhccCCcc
Confidence 79999999999753 222 33333343 8999999999998 47888888875 47999999997521 00
Q ss_pred ---------------------------cceEEEeCCEEEEEeeCCccCCC----CCHHHHHHHhhccCccEEEeCCCCCc
Q 029629 72 ---------------------------ETKTLTIGQFKLGICHGHQVIPW----GDLDSLAMLQRQLDVDILVTGHTHQF 120 (190)
Q Consensus 72 ---------------------------~~~~~~~~~~~i~~~Hg~~~~~~----~~~~~~~~~~~~~~~~~vi~GHtH~~ 120 (190)
.......+ +++++||++..+. .....+.+.++..++++++|||||.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~--~i~~~Hg~p~~~~~~~~~~~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 77 EFNPVARFASYWTTMQLQAEHLQYLESLPNRMIDG--DWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp --CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEET--TEEEESSCSSSTTTCCCCSHHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ccCHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEEC--CEEEEECCcCCccccccCChHHHHHHHhccCCCEEEECCcCcc
Confidence 01112222 6999999886543 23456677778889999999999999
Q ss_pred ceEE---------------------EcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEe
Q 029629 121 KAYK---------------------HEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYEL 168 (190)
Q Consensus 121 ~~~~---------------------~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l 168 (190)
.... ..+..++||||+|+| +++.+.++|++++.+++. ++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~P---rdg~p~A~Y~i~d~~~~~--v~~~rv 218 (246)
T 3rqz_A 155 LYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQP---RDGDPRASYAIFEPDAQR--VTFHRV 218 (246)
T ss_dssp EEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCC---CSSCCSEEEEEEEGGGTE--EEEEEE
T ss_pred cEEEecccccccccccccccceeecCCCeEEEECCccCCC---CCcCCcceEEEEECCCCE--EEEEEe
Confidence 8766 236899999999986 456677899999987764 455554
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.93 E-value=1.1e-25 Score=171.82 Aligned_cols=152 Identities=16% Similarity=0.096 Sum_probs=108.3
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCH--------HHHHHHhhhCCcEEEeccCCCCCCC--C
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIK--------EVHDYLKSLCPDLHVTRGEYDEDSR--Y 70 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~--------~~~~~l~~l~~~~~~v~GNHD~~~~--~ 70 (190)
||||+++||+|++. ...+.+.+.+++.++|+|+++||+++. ++++.|+++..|+++|+||||.... +
T Consensus 5 ~mri~~iSD~H~~~---~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~~~~ 81 (228)
T 1uf3_A 5 VRYILATSNPMGDL---EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYL 81 (228)
T ss_dssp CCEEEEEECCTTCH---HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHH
T ss_pred eEEEEEEeeccCCH---HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhHHHH
Confidence 48999999999852 123444444444589999999999973 3667777777799999999997531 0
Q ss_pred ----------Cc-----ceEEEe-------------------------------------------CCEEEEEeeCCccC
Q 029629 71 ----------PE-----TKTLTI-------------------------------------------GQFKLGICHGHQVI 92 (190)
Q Consensus 71 ----------p~-----~~~~~~-------------------------------------------~~~~i~~~Hg~~~~ 92 (190)
|. ...+.+ ++.+|+++|+++..
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~~~ 161 (228)
T 1uf3_A 82 REAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYH 161 (228)
T ss_dssp HHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCB
T ss_pred HhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCCCCeEEEEccCccc
Confidence 00 000111 24679999988753
Q ss_pred C---CCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEe
Q 029629 93 P---WGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYEL 168 (190)
Q Consensus 93 ~---~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l 168 (190)
. ..+...+.+++++.+++++++||+| +.....+++.++||||++ .++|+++++++ ++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~GH~H-~~~~~~~~~~~in~Gs~~----------~~~~~i~~~~~--~~~~~~~v 227 (228)
T 1uf3_A 162 KGLNEQGSHEVAHLIKTHNPLLVLVAGKG-QKHEMLGASWVVVPGDLS----------EGEYSLLDLRA--RKLETGNV 227 (228)
T ss_dssp TTTBTTSBHHHHHHHHHHCCSEEEECCSS-CEEEEETTEEEEECCBGG----------GTEEEEEETTT--TEEEEEEC
T ss_pred CCccccCHHHHHHHHHHhCCCEEEEcccc-cCccccCCceEEEecccC----------CCceEEEEecc--eEeeeccc
Confidence 2 2234556667777899999999999 666667889999999987 36899999876 55666654
No 11
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.92 E-value=8e-24 Score=169.98 Aligned_cols=170 Identities=21% Similarity=0.188 Sum_probs=117.3
Q ss_pred eEEEEEeecCCCCCCC------ChH---HHHHhhhCC--CCccEEEEcCCCCCH-------HHHHHHhh----hCCcEEE
Q 029629 2 VLVLAIGDLHIPHRAS------DLP---QKFKSMLVP--GKIQHIICTGNLSIK-------EVHDYLKS----LCPDLHV 59 (190)
Q Consensus 2 mri~~iSD~H~~~~~~------~~~---~~l~~~~~~--~~~D~vi~~GDl~~~-------~~~~~l~~----l~~~~~~ 59 (190)
|||+++||+|+..... ... +.+.+.+++ .++|+|+++||+++. ...+.+++ +..|+++
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~ 105 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVW 105 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 8999999999843211 112 223333333 689999999999982 23334433 3679999
Q ss_pred eccCCCCCCC------------CCcceEEEeCCE------------------------------------EEEEeeCCcc
Q 029629 60 TRGEYDEDSR------------YPETKTLTIGQF------------------------------------KLGICHGHQV 91 (190)
Q Consensus 60 v~GNHD~~~~------------~p~~~~~~~~~~------------------------------------~i~~~Hg~~~ 91 (190)
|+||||.... .+....++.++. +++++|+.+.
T Consensus 106 v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~~~~~~~iv~~Hh~p~ 185 (330)
T 3ib7_A 106 VMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPI 185 (330)
T ss_dssp CCCTTSCHHHHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSCCTTCEEEECSSCSS
T ss_pred eCCCCCCHHHHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHHhcccCCeEEEEECCCC
Confidence 9999996420 112233333333 4677776654
Q ss_pred CCC---------CCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCC-------CCCCCCCeEEEEE
Q 029629 92 IPW---------GDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSS-------FTFDVNPSFVLMD 155 (190)
Q Consensus 92 ~~~---------~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~-------~~~~~~~~~~ll~ 155 (190)
... .+.+.+.+++++.+++++++||+|.+.....+|+.++|+||.+....+ .....+++|++++
T Consensus 186 ~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~ 265 (330)
T 3ib7_A 186 PSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVH 265 (330)
T ss_dssp CCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEE
T ss_pred CCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEE
Confidence 321 234567778888899999999999999989999999999999853221 1224567899999
Q ss_pred EeCCEEEEEEEEeeCC
Q 029629 156 IDGLRVVVYVYELIDG 171 (190)
Q Consensus 156 i~~~~~~~~~~~l~~~ 171 (190)
++++++.++++++...
T Consensus 266 i~~~~~~~~~v~~~~~ 281 (330)
T 3ib7_A 266 VYPDTVVHSVIPLGGG 281 (330)
T ss_dssp ECSSCEEEEEEECSCC
T ss_pred EECCCeEEEEeccCCC
Confidence 9999999999998653
No 12
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.92 E-value=2.1e-24 Score=168.19 Aligned_cols=149 Identities=15% Similarity=0.165 Sum_probs=104.1
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHH-------------------------------H---
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKE-------------------------------V--- 46 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~-------------------------------~--- 46 (190)
||||+++||+|++. .. .+++.+.++..++|+|+++||+++.. .
T Consensus 5 ~mri~~iSDlH~~~--~~-~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (260)
T 2yvt_A 5 PRKVLAIKNFKERF--DL-LPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKF 81 (260)
T ss_dssp CCEEEEEECCTTCG--GG-HHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCCh--HH-HHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHH
Confidence 48999999999863 22 34444444446899999999999831 1
Q ss_pred HHHHhhhCCcEEEeccCCCCCCCC------Cc-----------ceE-EEe------------------------------
Q 029629 47 HDYLKSLCPDLHVTRGEYDEDSRY------PE-----------TKT-LTI------------------------------ 78 (190)
Q Consensus 47 ~~~l~~l~~~~~~v~GNHD~~~~~------p~-----------~~~-~~~------------------------------ 78 (190)
++.|+++..|+++|+||||..... +. ... +++
T Consensus 82 l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
T 2yvt_A 82 FREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYV 161 (260)
T ss_dssp HHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHHH
T ss_pred HHHHHhcCCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcchhhH
Confidence 233444456899999999975210 00 011 111
Q ss_pred -----------CCEEEEEeeCCccCC----------CCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCcc
Q 029629 79 -----------GQFKLGICHGHQVIP----------WGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSAT 137 (190)
Q Consensus 79 -----------~~~~i~~~Hg~~~~~----------~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~ 137 (190)
++.+|+++|+++... ..+...+.+++++.++++++|||+| +.....+++.++||||++
T Consensus 162 ~~~l~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~~in~Gs~~ 240 (260)
T 2yvt_A 162 EYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTIVVNPGEFE 240 (260)
T ss_dssp HHHGGGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEEEEECCBGG
T ss_pred HHHHHHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEEEEeCCCCC
Confidence 246799999887532 1123456677777899999999999 777777889999999987
Q ss_pred CCCCCCCCCCCCeEEEEEEeCCEEEE
Q 029629 138 GAYSSFTFDVNPSFVLMDIDGLRVVV 163 (190)
Q Consensus 138 ~~~~~~~~~~~~~~~ll~i~~~~~~~ 163 (190)
. ++|++++++++.+++
T Consensus 241 ~----------g~~~ii~~~~~~~~~ 256 (260)
T 2yvt_A 241 E----------GRYAFLDLTQHKIKL 256 (260)
T ss_dssp G----------TEEEEEETTTTEEEE
T ss_pred C----------CceEEEEEcCCEEEe
Confidence 2 399999998886654
No 13
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.92 E-value=1.2e-23 Score=164.84 Aligned_cols=168 Identities=17% Similarity=0.139 Sum_probs=116.5
Q ss_pred eEEEEEeecCCCCCC------CC---hHHHHHhhhCC--CCccEEEEcCCCCCH-------HHHHHHhhhCCcEEEeccC
Q 029629 2 VLVLAIGDLHIPHRA------SD---LPQKFKSMLVP--GKIQHIICTGNLSIK-------EVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 2 mri~~iSD~H~~~~~------~~---~~~~l~~~~~~--~~~D~vi~~GDl~~~-------~~~~~l~~l~~~~~~v~GN 63 (190)
|||+++||+|++... .. .++.+.+.+++ .++|+|+++||+++. .+.+.|+++..|+++|+||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 799999999986421 01 12222222323 368999999999972 3456677777799999999
Q ss_pred CCCCCC--------C---C-----cceEEE------------------------------------eCCEEEEEeeCCcc
Q 029629 64 YDEDSR--------Y---P-----ETKTLT------------------------------------IGQFKLGICHGHQV 91 (190)
Q Consensus 64 HD~~~~--------~---p-----~~~~~~------------------------------------~~~~~i~~~Hg~~~ 91 (190)
||.... + + ....++ .+...|+++|+++.
T Consensus 81 HD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~iv~~H~p~~ 160 (274)
T 3d03_A 81 HDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPL 160 (274)
T ss_dssp TSCHHHHHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSS
T ss_pred CCCHHHHHHHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCCCCCEEEEECCCCc
Confidence 997421 0 1 011111 13578999998775
Q ss_pred CCC---------CCHHHHHHHhhcc-CccEEEeCCCCCcceEEEcC-eEEEccCCccCCCCC------CCCCCCCeEEEE
Q 029629 92 IPW---------GDLDSLAMLQRQL-DVDILVTGHTHQFKAYKHEG-GVVINPGSATGAYSS------FTFDVNPSFVLM 154 (190)
Q Consensus 92 ~~~---------~~~~~~~~~~~~~-~~~~vi~GHtH~~~~~~~~~-~~~inpGs~~~~~~~------~~~~~~~~~~ll 154 (190)
... .+.+.+.+++++. +++++++||+|.+.....++ ..++|||+.+..+.. .....+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~ 240 (274)
T 3d03_A 161 PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMH 240 (274)
T ss_dssp CCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEE
T ss_pred ccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCCCccccccccCCCceEEE
Confidence 321 1235666777776 89999999999998888888 477899998764321 123457899999
Q ss_pred EEeCCEEEEEEEEee
Q 029629 155 DIDGLRVVVYVYELI 169 (190)
Q Consensus 155 ~i~~~~~~~~~~~l~ 169 (190)
++++++++++++++.
T Consensus 241 ~i~~~~~~~~~~~~~ 255 (274)
T 3d03_A 241 RQVGEQWVSYQHSLA 255 (274)
T ss_dssp EEETTEEEEEEEECS
T ss_pred EEeCCcEEEEEEecC
Confidence 999999999999984
No 14
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.92 E-value=2.5e-24 Score=161.77 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=101.7
Q ss_pred eEEEEEeecCCCCCC----------CChHHHHHhhhCC--CCccEEEEcCCCCCH-----HHHHHHhhhCCcEEEeccCC
Q 029629 2 VLVLAIGDLHIPHRA----------SDLPQKFKSMLVP--GKIQHIICTGNLSIK-----EVHDYLKSLCPDLHVTRGEY 64 (190)
Q Consensus 2 mri~~iSD~H~~~~~----------~~~~~~l~~~~~~--~~~D~vi~~GDl~~~-----~~~~~l~~l~~~~~~v~GNH 64 (190)
|||+++||+|++... .+..+++.+.+++ .++|.|+++||+++. ++++.|+++..|+++|+|||
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GNh 81 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNH 81 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTT
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCCC
Confidence 789999999985431 1233444444433 579999999999874 67888888877899999999
Q ss_pred CCCC--------CCCcceEEE-eCCEEEEEeeCCccCCCCC-----HHHHHHHhhccCccEEEeCCCCCcceEEEc----
Q 029629 65 DEDS--------RYPETKTLT-IGQFKLGICHGHQVIPWGD-----LDSLAMLQRQLDVDILVTGHTHQFKAYKHE---- 126 (190)
Q Consensus 65 D~~~--------~~p~~~~~~-~~~~~i~~~Hg~~~~~~~~-----~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~---- 126 (190)
|... .+|....++ .++.+|+++||++..+... .+.+.+.++..+++++++||+|.+.....+
T Consensus 82 D~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~H~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~ 161 (195)
T 1xm7_A 82 DKDKESLKEYFDEIYDFYKIIEHKGKRILLSHYPAKDPITERYPDRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKD 161 (195)
T ss_dssp CCCHHHHTTTCSEEESSEEEEEETTEEEEEESSCSSCSSCCSCHHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTS
T ss_pred CCchhhhhhhhhchhHHHHHHhcCCcEEEEEccCCcCCCcccccchHHHHHHHHHHcCCcEEEECCcCCCCccccccccc
Confidence 9853 245555555 7899999999987644322 456667777788999999999999887664
Q ss_pred -CeEEEccCCccC
Q 029629 127 -GGVVINPGSATG 138 (190)
Q Consensus 127 -~~~~inpGs~~~ 138 (190)
+..++|+|+...
T Consensus 162 ~g~~~~nvg~~~~ 174 (195)
T 1xm7_A 162 YRIECINANVEWN 174 (195)
T ss_dssp SSCCEEECBGGGT
T ss_pred CCcceEEEeEecc
Confidence 677899998653
No 15
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.89 E-value=6e-23 Score=169.31 Aligned_cols=175 Identities=15% Similarity=0.085 Sum_probs=114.2
Q ss_pred CeEEEEEeecCCCCCCCC----------hHHHHHhhhCCCCccEEEEcCCCCCH---------HHHHHHhhh---CCcEE
Q 029629 1 MVLVLAIGDLHIPHRASD----------LPQKFKSMLVPGKIQHIICTGNLSIK---------EVHDYLKSL---CPDLH 58 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~----------~~~~l~~~~~~~~~D~vi~~GDl~~~---------~~~~~l~~l---~~~~~ 58 (190)
||||+++||+|++..... ..+++.+.+.+.+||+|+++||+++. .+.+.|+++ +.|++
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~pv~ 99 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVY 99 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 599999999998642111 12333344456889999999999982 245556665 57999
Q ss_pred EeccCCCCCCCC----Ccc-------------------eEEE---------------------------eCCEEEEEeeC
Q 029629 59 VTRGEYDEDSRY----PET-------------------KTLT---------------------------IGQFKLGICHG 88 (190)
Q Consensus 59 ~v~GNHD~~~~~----p~~-------------------~~~~---------------------------~~~~~i~~~Hg 88 (190)
+|+||||..... |.. ..+. .++.+|+++|+
T Consensus 100 ~v~GNHD~~~~~~~~~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~~~~~~~~~~l~~l~~~~~~~~~~Ill~H~ 179 (386)
T 3av0_A 100 IVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQ 179 (386)
T ss_dssp ECCCGGGSCSSTTSCCGGGGGTTTCEECSEEEEEEETTEEEEEEEECCCCSTTHHHHHHHHHHHHHHHHTCSSEEEEECC
T ss_pred EEcCCCCCCccccccCHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCHHHHHHHHHHHHHhhhhcccCCCEEEEECc
Confidence 999999986421 100 0011 04578999998
Q ss_pred CccCCCCCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCC-----CCCeEEEEEEeC---CE
Q 029629 89 HQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFD-----VNPSFVLMDIDG---LR 160 (190)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~-----~~~~~~ll~i~~---~~ 160 (190)
++.....+...+. +..-.++|++++||+|.+.....++..++||||+... ++.+. .+++|+++++++ +.
T Consensus 180 ~~~~~~~~~~~~~-~~~l~~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~--~~~e~~~~~~~~kg~~lv~i~~~~~~~ 256 (386)
T 3av0_A 180 GINPYIPLDYELE-HFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEII--YRNEYEDYKKEGKGFYLVDFSGNDLDI 256 (386)
T ss_dssp CCTTTSSSSCSSC-GGGSCCCSEEEECSCCSCEEEECSSSEEEECCCSSCC--SGGGTHHHHHHCSEEEEEECCSSSCCG
T ss_pred CccccCCCCcccC-HHHhhhCCeEEccCCCCCccccCCCceEEECCccccc--CcchhccccCCCCEEEEEEEecCcCCC
Confidence 7632111000000 0111249999999999996555678899999999753 22221 468999999987 66
Q ss_pred EEEEEEEeeCCeEEEEEEEe
Q 029629 161 VVVYVYELIDGEVKVDKIDF 180 (190)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~ 180 (190)
++++++++...++ ..+++
T Consensus 257 ~~v~~i~l~~r~~--~~~~~ 274 (386)
T 3av0_A 257 SDIEKIDIECREF--VEVNI 274 (386)
T ss_dssp GGEEEEECCCCCE--EEEEE
T ss_pred ceEEEEECCccee--EEEeC
Confidence 7889999966555 44444
No 16
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.89 E-value=2.4e-22 Score=167.55 Aligned_cols=182 Identities=16% Similarity=0.131 Sum_probs=123.0
Q ss_pred CeEEEEEeecCCCCCCC------C---hHHHHHhhhCCCCccEEEEcCCCCCH---------HHHHHHhh----------
Q 029629 1 MVLVLAIGDLHIPHRAS------D---LPQKFKSMLVPGKIQHIICTGNLSIK---------EVHDYLKS---------- 52 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~------~---~~~~l~~~~~~~~~D~vi~~GDl~~~---------~~~~~l~~---------- 52 (190)
||||+++||+|++.... + ..+++.+.+.+.+||+|+++||+++. .+++.|++
T Consensus 76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~~~ 155 (472)
T 4fbk_A 76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCEL 155 (472)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCCCC
T ss_pred CeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcchh
Confidence 69999999999964321 1 12344444556899999999999981 23444443
Q ss_pred --------------------------hCCcEEEeccCCCCCCCC---------------------C--c-----ceE---
Q 029629 53 --------------------------LCPDLHVTRGEYDEDSRY---------------------P--E-----TKT--- 75 (190)
Q Consensus 53 --------------------------l~~~~~~v~GNHD~~~~~---------------------p--~-----~~~--- 75 (190)
.+.|+++++||||..... + + ...
T Consensus 156 e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~~~d~i~~~pv~l~k 235 (472)
T 4fbk_A 156 ELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQK 235 (472)
T ss_dssp EEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCSCSSSEEECCEEEEE
T ss_pred eecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcccCCceeEEEEEEEe
Confidence 257999999999986310 0 0 000
Q ss_pred -----------------------------EEe-----CCEEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcc
Q 029629 76 -----------------------------LTI-----GQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFK 121 (190)
Q Consensus 76 -----------------------------~~~-----~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~ 121 (190)
+.. +..+|+++|+....... ...+..-+...++|++++||+|.+.
T Consensus 236 g~~~valyGl~y~~d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~-~~yipe~ll~~g~DyValGH~H~~~ 314 (472)
T 4fbk_A 236 GFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP-TSYLPESFIQDFYDFVLWGHEHECL 314 (472)
T ss_dssp TTEEEEEEECCCCCHHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSST-TSSCCGGGSCTTCSEEEEESCCSCE
T ss_pred CCceEEEEecCCCchhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCc-cccCChhhhhcCCCEEEecCcccce
Confidence 111 24678888876432110 0111111335689999999999998
Q ss_pred eEE----EcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEeeC-CeEEEEEEEeecc
Q 029629 122 AYK----HEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYELID-GEVKVDKIDFKKT 183 (190)
Q Consensus 122 ~~~----~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 183 (190)
... .++..++||||+.....+..+..+++|++++++++.++++++++.. .+|...++++...
T Consensus 315 ~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~L~~~ 381 (472)
T 4fbk_A 315 IDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSEV 381 (472)
T ss_dssp EEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred eeecccCCCCeEEEECCCccccccCccCCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEEecc
Confidence 764 2578999999997543222334688999999999999999999987 5689989887654
No 17
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.89 E-value=5.7e-23 Score=170.53 Aligned_cols=182 Identities=17% Similarity=0.197 Sum_probs=120.5
Q ss_pred CeEEEEEeecCCCCCCCC---------hHHHHHhhhCCCCccEEEEcCCCCCH---------HHHHHHhh----------
Q 029629 1 MVLVLAIGDLHIPHRASD---------LPQKFKSMLVPGKIQHIICTGNLSIK---------EVHDYLKS---------- 52 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~---------~~~~l~~~~~~~~~D~vi~~GDl~~~---------~~~~~l~~---------- 52 (190)
||||+++||+|++..... ..+++.+.+++.+||+|+++||+++. .+.+.|++
T Consensus 32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~~ 111 (431)
T 3t1i_A 32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQF 111 (431)
T ss_dssp EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCCC
T ss_pred CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCcccc
Confidence 599999999999653321 22444444556899999999999981 33444443
Q ss_pred --------------------------hCCcEEEeccCCCCCCC---C--------------------Cc-----ceEEEe
Q 029629 53 --------------------------LCPDLHVTRGEYDEDSR---Y--------------------PE-----TKTLTI 78 (190)
Q Consensus 53 --------------------------l~~~~~~v~GNHD~~~~---~--------------------p~-----~~~~~~ 78 (190)
.+.|+++|.||||.... + .+ ...++.
T Consensus 112 ~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~~~e~i~~~Pv~l~~ 191 (431)
T 3t1i_A 112 EILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQK 191 (431)
T ss_dssp EECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCCCSSCEEECCEEEEE
T ss_pred eeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcCcccceeeEEEEEec
Confidence 24799999999997621 0 00 000110
Q ss_pred -------------------------------------CCEEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcc
Q 029629 79 -------------------------------------GQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFK 121 (190)
Q Consensus 79 -------------------------------------~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~ 121 (190)
+..+|+++|+..... .....+.+-+...++|++++||+|.+.
T Consensus 192 g~~~valyGl~~~~~~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~-g~~~~ip~~l~~~~~Dyv~lGH~H~~~ 270 (431)
T 3t1i_A 192 GSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKH-GSTNFIPEQFLDDFIDLVIWGHEHECK 270 (431)
T ss_dssp TTEEEEEEEECCCCHHHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCS-SSSSSCCGGGSCTTCCEEEECSCCSCE
T ss_pred CCEeEEEEeCCCCCHHHHhhhhccccceeecccccCCCceEEEEECCCccCC-CccccCCHhHhhCCCCEEEeccccccc
Confidence 125678888753211 000111112234579999999999998
Q ss_pred eEE----EcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEee-CCeEEEEEEEeecc
Q 029629 122 AYK----HEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYELI-DGEVKVDKIDFKKT 183 (190)
Q Consensus 122 ~~~----~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l~-~~~~~~~~~~~~~~ 183 (190)
... .++..++||||+........+..+.+|++++++++.++++++++. -.++...++++...
T Consensus 271 ~~~~~~~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v~l~~~ 337 (431)
T 3t1i_A 271 IAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLANH 337 (431)
T ss_dssp EEEEECTTTCCEEEECCCSSCCSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred ccccccCCCCEEEEeCCCCcccCcCcccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEEEEecc
Confidence 765 246899999999753211112356799999999999999999998 46689999987754
No 18
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.89 E-value=2.1e-22 Score=166.52 Aligned_cols=182 Identities=17% Similarity=0.136 Sum_probs=120.9
Q ss_pred CeEEEEEeecCCCCCCC------Ch---HHHHHhhhCCCCccEEEEcCCCCCH---------HHHHHHhh----------
Q 029629 1 MVLVLAIGDLHIPHRAS------DL---PQKFKSMLVPGKIQHIICTGNLSIK---------EVHDYLKS---------- 52 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~------~~---~~~l~~~~~~~~~D~vi~~GDl~~~---------~~~~~l~~---------- 52 (190)
||||+++||+|++.... +. .+++.+.+.+.+||+|+++||+++. .+++.|++
T Consensus 13 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~~~ 92 (417)
T 4fbw_A 13 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCEL 92 (417)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCCCC
T ss_pred CeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcccc
Confidence 69999999999964321 11 2334444456899999999999981 23344433
Q ss_pred --------------------------hCCcEEEeccCCCCCCCC------------------------------C-----
Q 029629 53 --------------------------LCPDLHVTRGEYDEDSRY------------------------------P----- 71 (190)
Q Consensus 53 --------------------------l~~~~~~v~GNHD~~~~~------------------------------p----- 71 (190)
.+.|+++++||||..... |
T Consensus 93 e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~~~i~~~pv~l~~ 172 (417)
T 4fbw_A 93 ELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQK 172 (417)
T ss_dssp EECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC---CEEECCEEEEE
T ss_pred eeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccCCceeEEeEEEEe
Confidence 256899999999986310 0
Q ss_pred -------------c----------ce--EEE-----eCCEEEEEeeCCccCCCCCHHHHHHHhhccCccEEEeCCCCCcc
Q 029629 72 -------------E----------TK--TLT-----IGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFK 121 (190)
Q Consensus 72 -------------~----------~~--~~~-----~~~~~i~~~Hg~~~~~~~~~~~~~~~~~~~~~~~vi~GHtH~~~ 121 (190)
. .. .+. -+..+|+++|+........ ..+..-+...++|++++||+|.+.
T Consensus 173 g~~~valyG~~~~~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~-~yip~~l~~~~~DyvalGH~H~~~ 251 (417)
T 4fbw_A 173 GFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT-SYLPESFIQDFYDFVLWGHEHECL 251 (417)
T ss_dssp TTEEEEEEEECCCCHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSS-SSCCGGGSCTTCSEEEEESCCSCE
T ss_pred cCceEEEEeccCCchhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCc-ccCchhHhhcCCCEEEecCccccc
Confidence 0 00 011 1357888888754321100 001112335689999999999998
Q ss_pred eEE----EcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEeeC-CeEEEEEEEeecc
Q 029629 122 AYK----HEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYELID-GEVKVDKIDFKKT 183 (190)
Q Consensus 122 ~~~----~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 183 (190)
... .++..++||||+.....+..+.++++|++++++++.++++.+++.. .++...++++...
T Consensus 252 ~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 252 IDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred eeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEeecc
Confidence 764 3578999999997542211123588999999999999999999987 5588888887755
No 19
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.86 E-value=4.2e-22 Score=152.40 Aligned_cols=133 Identities=23% Similarity=0.312 Sum_probs=93.8
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCC-CCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEeccCCCCCC------
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVP-GKIQHIICTGNLSI-----KEVHDYLKSLCPDLHVTRGEYDEDS------ 68 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~------ 68 (190)
|||++++||+|++. ..+.+.+ +.++. .++|.++++||+++ .++++.|.+ .++++|+||||...
T Consensus 12 ~~~i~visDiHg~~--~~l~~~l-~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~~~~~~~~ 86 (221)
T 1g5b_A 12 YRNIWVVGDLHGCY--TNLMNKL-DTIGFDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQMMIDGLSE 86 (221)
T ss_dssp CSCEEEECCCTTCH--HHHHHHH-HHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHHHHHHHST
T ss_pred CceEEEEEcCCCCH--HHHHHHH-HHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHHHHhhhcc
Confidence 58999999999752 2233333 33333 47899999999998 355555554 47999999999531
Q ss_pred ----------------------------------CCCcceEEEeCCEEEEEeeCCccCC---CC---CH-------HHHH
Q 029629 69 ----------------------------------RYPETKTLTIGQFKLGICHGHQVIP---WG---DL-------DSLA 101 (190)
Q Consensus 69 ----------------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~---~~---~~-------~~~~ 101 (190)
.+|....++.++.+++++||+.... +. +. ..+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~lw~~~~~~ 166 (221)
T 1g5b_A 87 RGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNRERIS 166 (221)
T ss_dssp TCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHHHCCHHHH
T ss_pred CCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccccCchhhh
Confidence 2355556677899999999975311 01 11 2222
Q ss_pred HHhh-----ccCccEEEeCCCCCcceEEEcCeEEEccCCccC
Q 029629 102 MLQR-----QLDVDILVTGHTHQFKAYKHEGGVVINPGSATG 138 (190)
Q Consensus 102 ~~~~-----~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~ 138 (190)
..++ ..+++++++||||.+.....+++.+|||||+..
T Consensus 167 ~~~~~~~~~~~~~~~vv~GHth~~~~~~~~~~~~in~Gs~~g 208 (221)
T 1g5b_A 167 NSQNGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAVFC 208 (221)
T ss_dssp HHHTTCCCCCBTSSEEEECSSCCSSCEEETTEEECCCCHHHH
T ss_pred hhccccCCcccCCCEEEECCCCCccceeeCCEEEEECCCCcC
Confidence 2233 357899999999999988899999999999863
No 20
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.86 E-value=4.4e-21 Score=155.27 Aligned_cols=175 Identities=19% Similarity=0.160 Sum_probs=109.3
Q ss_pred CeEEEEEeecCCC----CCCC---------ChHHHHHhhhCCCCccEEEEcCC-CCCH---------HHHHHHhhhC--C
Q 029629 1 MVLVLAIGDLHIP----HRAS---------DLPQKFKSMLVPGKIQHIICTGN-LSIK---------EVHDYLKSLC--P 55 (190)
Q Consensus 1 Mmri~~iSD~H~~----~~~~---------~~~~~l~~~~~~~~~D~vi~~GD-l~~~---------~~~~~l~~l~--~ 55 (190)
||||+++||+|++ .... ...+++.+.++++++|+|+++|| +++. .+.+.|+++. .
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~ 97 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTA 97 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 4999999999975 2110 11334444445678999999999 9971 2355666664 6
Q ss_pred cEEEeccCCCCCC-----------C--C-----Cc---------ce--E-----------------------------E-
Q 029629 56 DLHVTRGEYDEDS-----------R--Y-----PE---------TK--T-----------------------------L- 76 (190)
Q Consensus 56 ~~~~v~GNHD~~~-----------~--~-----p~---------~~--~-----------------------------~- 76 (190)
|+++|+||||... . + +. .. + +
T Consensus 98 pv~~i~GNHD~~~~~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~ 177 (336)
T 2q8u_A 98 PVVVLPGNHDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLY 177 (336)
T ss_dssp CEEECCC------CHHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCccccccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8999999999753 1 0 00 00 0 0
Q ss_pred ----EeCCEEEEEeeCCccCCCC-CHHH------HHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCC
Q 029629 77 ----TIGQFKLGICHGHQVIPWG-DLDS------LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTF 145 (190)
Q Consensus 77 ----~~~~~~i~~~Hg~~~~~~~-~~~~------~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~ 145 (190)
..+..+|++.|+....... +.+. +...+...++|++++||+|.++.... +..++||||+... ++.+
T Consensus 178 ~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~-~~~i~y~GS~~~~--s~~e 254 (336)
T 2q8u_A 178 EEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQK-QPLTIYPGSLIRI--DFGE 254 (336)
T ss_dssp HHHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEEE-TTEEEECCCSSCC--SGGG
T ss_pred HhccCCCCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeCC-CccEEECCCCcCC--Cccc
Confidence 1244679999987643211 1111 11112345899999999999987653 4688999998643 2222
Q ss_pred -CCCCeEEEEEEeCC-EEEEEEEEeeCCeEEEEEE
Q 029629 146 -DVNPSFVLMDIDGL-RVVVYVYELIDGEVKVDKI 178 (190)
Q Consensus 146 -~~~~~~~ll~i~~~-~~~~~~~~l~~~~~~~~~~ 178 (190)
+.+++|++++++++ .++++++++...++....+
T Consensus 255 ~~~~~~~~lv~i~~~~~~~v~~i~~~~r~~~~~~~ 289 (336)
T 2q8u_A 255 EADEKGAVFVELKRGEPPRYERIDASPLPLKTLYY 289 (336)
T ss_dssp TTCCCEEEEEEEETTSCCEEEEEECCCCCEEEEEE
T ss_pred cCCCCEEEEEEEeCCCccEEEEEECCCEEEEEeec
Confidence 34789999999976 4889999998766666554
No 21
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.83 E-value=2.1e-19 Score=143.03 Aligned_cols=68 Identities=15% Similarity=0.109 Sum_probs=52.3
Q ss_pred HHHHHHHhhcc-CccEEEeCCCCCcceEE-EcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEEEEEEEEee
Q 029629 97 LDSLAMLQRQL-DVDILVTGHTHQFKAYK-HEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRVVVYVYELI 169 (190)
Q Consensus 97 ~~~~~~~~~~~-~~~~vi~GHtH~~~~~~-~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~~~~~~~l~ 169 (190)
.+.+.++++++ +++++++||+|.+.... .+|+.++++|++... ....++|+++++++++++++.+...
T Consensus 245 ~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~-----~~~~~~y~~v~~~~~~~~~~~~~~~ 314 (322)
T 2nxf_A 245 HEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET-----PPHSHAFATAYLYEDRMVMKGRGRV 314 (322)
T ss_dssp HHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGC-----CTTSCEEEEEEECSSEEEEEEEETS
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecchhhC-----CCCCCcEEEEEEECCeEEEEecccc
Confidence 34455666665 68899999999998887 788889888887531 2356899999999999888766554
No 22
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.83 E-value=8.2e-20 Score=150.23 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=110.3
Q ss_pred eEEEEEeecCCCCC----CCC---------hHHHHHhhhCCCCccEEEEcCCCC-CH------------HHHHHHhhhCC
Q 029629 2 VLVLAIGDLHIPHR----ASD---------LPQKFKSMLVPGKIQHIICTGNLS-IK------------EVHDYLKSLCP 55 (190)
Q Consensus 2 mri~~iSD~H~~~~----~~~---------~~~~l~~~~~~~~~D~vi~~GDl~-~~------------~~~~~l~~l~~ 55 (190)
|||+++||+|++.. ... ..+.+.+.+++.+||+|+++||++ +. +.+..|.+. .
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 89999999999653 111 233444444567899999999999 61 233344444 7
Q ss_pred cEEEeccCCCCCC---------CCC---------cceEE-----------------------------------------
Q 029629 56 DLHVTRGEYDEDS---------RYP---------ETKTL----------------------------------------- 76 (190)
Q Consensus 56 ~~~~v~GNHD~~~---------~~p---------~~~~~----------------------------------------- 76 (190)
|+++|+||||... .++ ....+
T Consensus 80 ~v~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~~l~~~~ 159 (379)
T 3tho_B 80 PVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLY 159 (379)
T ss_dssp CEEECCCTTSCTTHHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCccccCccccccccccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHHHHHHHH
Confidence 8999999999642 000 00000
Q ss_pred ----EeCCEEEEEeeCCccCCCC--CHHH-----HHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCC-
Q 029629 77 ----TIGQFKLGICHGHQVIPWG--DLDS-----LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFT- 144 (190)
Q Consensus 77 ----~~~~~~i~~~Hg~~~~~~~--~~~~-----~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~- 144 (190)
..+..+|++.|+....... +.++ +...+...++|++++||+|.+.... ++..++||||+... ++.
T Consensus 160 ~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~-~~~~i~y~GS~~~~--~f~E 236 (379)
T 3tho_B 160 EEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQ-KQPLTIYPGSLIRI--DFGE 236 (379)
T ss_dssp HHHHTCSSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEEE-ETTEEEECCCSSCC--SGGG
T ss_pred HHhcCCCCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEeC-CCCcEEecCCCCCC--Cccc
Confidence 0245679999976543211 1111 1111223589999999999996543 33589999999542 233
Q ss_pred CCCCCeEEEEEEeCCE-EEEEEEEeeCCeEEEEEEE
Q 029629 145 FDVNPSFVLMDIDGLR-VVVYVYELIDGEVKVDKID 179 (190)
Q Consensus 145 ~~~~~~~~ll~i~~~~-~~~~~~~l~~~~~~~~~~~ 179 (190)
.+.+.+|+++++++++ +++++++....+++..+..
T Consensus 237 ~~~~k~~~lv~~~~~~~~~v~~i~~~~r~~~~~~~~ 272 (379)
T 3tho_B 237 EADEKGAVFVELKRGEPPRYERIDASPLPLKTLYYK 272 (379)
T ss_dssp SSSCCEEEEEECCSSSCCEEEEEECCCCCEEEEECS
T ss_pred ccCCCEEEEEEEcCCCcceEEEeCCCCeeeEEEEcC
Confidence 3456899999998654 6788888445556666555
No 23
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.83 E-value=1.9e-19 Score=150.42 Aligned_cols=81 Identities=9% Similarity=-0.040 Sum_probs=60.6
Q ss_pred EEEEEeeCCccCCC---------CCHHHHHHHhhccCccEEEeCCCCCcceEEEc-----CeEEEccCCccCCCCCCCCC
Q 029629 81 FKLGICHGHQVIPW---------GDLDSLAMLQRQLDVDILVTGHTHQFKAYKHE-----GGVVINPGSATGAYSSFTFD 146 (190)
Q Consensus 81 ~~i~~~Hg~~~~~~---------~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~-----~~~~inpGs~~~~~~~~~~~ 146 (190)
..|+++|+++.... .+.+.+.+++++.+++++++||+|.+...... +...+++||++.
T Consensus 237 ~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~-------- 308 (443)
T 2xmo_A 237 KLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV-------- 308 (443)
T ss_dssp EEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS--------
T ss_pred eEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc--------
Confidence 45899998764321 13566777888889999999999998876542 368899999874
Q ss_pred CCCeEEEEEEeCCE--EEEEEEEee
Q 029629 147 VNPSFVLMDIDGLR--VVVYVYELI 169 (190)
Q Consensus 147 ~~~~~~ll~i~~~~--~~~~~~~l~ 169 (190)
.+++|+++++++++ ++.+.+.++
T Consensus 309 ~p~~y~il~i~~~~~~~~~~~~~l~ 333 (443)
T 2xmo_A 309 FPHKYGNITYSAKNKNFTYQSQKLD 333 (443)
T ss_dssp TTCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCCCeEEEEEeCCCceEEEEEEEEe
Confidence 25899999999776 666666664
No 24
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.83 E-value=3.2e-19 Score=141.40 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=92.5
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-------HHHHHHHhhhC-CcEEEeccCCCCCCC----
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-------KEVHDYLKSLC-PDLHVTRGEYDEDSR---- 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-------~~~~~~l~~l~-~~~~~v~GNHD~~~~---- 69 (190)
|||+++||+|.+.. .+ + -.++|+|+++||+++ ..++++|+++. .++++|+||||...+
T Consensus 60 mri~~iSD~H~~~~--~l-----~---i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~~d~~~~ 129 (296)
T 3rl5_A 60 TRFVCISDTRSRTD--GI-----Q---MPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFM 129 (296)
T ss_dssp EEEEEEBCCTTCCT--TC-----C---CCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGGGCHHHH
T ss_pred eEEEEEeeCCCCcc--hh-----c---cCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccccchhhh
Confidence 89999999998642 11 2 257999999999998 24567777775 468999999998421
Q ss_pred ---------------------------CC------cceEEEe-----------------------------------CCE
Q 029629 70 ---------------------------YP------ETKTLTI-----------------------------------GQF 81 (190)
Q Consensus 70 ---------------------------~p------~~~~~~~-----------------------------------~~~ 81 (190)
+. ....+++ ++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~~~ 209 (296)
T 3rl5_A 130 ADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGT 209 (296)
T ss_dssp HHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCTTC
T ss_pred hhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCCCC
Confidence 00 0011111 244
Q ss_pred EEEEeeCCccCCC---------CCHHHHHHHh-hccCccEEEeCCCCCcce-EEEcCeEEEccCCccCCC
Q 029629 82 KLGICHGHQVIPW---------GDLDSLAMLQ-RQLDVDILVTGHTHQFKA-YKHEGGVVINPGSATGAY 140 (190)
Q Consensus 82 ~i~~~Hg~~~~~~---------~~~~~~~~~~-~~~~~~~vi~GHtH~~~~-~~~~~~~~inpGs~~~~~ 140 (190)
.|+++||+++... .+.+.+.+.+ ++.++++++|||+|.+.. ...+++.++||||++.++
T Consensus 210 dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~ 279 (296)
T 3rl5_A 210 DILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSF 279 (296)
T ss_dssp SEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTS
T ss_pred eEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCc
Confidence 6899998886542 1335566666 578999999999999865 456889999999999764
No 25
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.81 E-value=4.3e-19 Score=140.90 Aligned_cols=181 Identities=17% Similarity=0.152 Sum_probs=118.3
Q ss_pred eEEEEEeecCCCCCCC-------ChHHHHHhhhCCCCccEEEEcCCCCC---------HHHHHHHhh------h-CCcEE
Q 029629 2 VLVLAIGDLHIPHRAS-------DLPQKFKSMLVPGKIQHIICTGNLSI---------KEVHDYLKS------L-CPDLH 58 (190)
Q Consensus 2 mri~~iSD~H~~~~~~-------~~~~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~------l-~~~~~ 58 (190)
|||+++||+|...... .+.+.+.+++++.++|+|+++||++. .+..+.+++ + ..|++
T Consensus 7 ~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 86 (313)
T 1ute_A 7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH 86 (313)
T ss_dssp EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred eEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEE
Confidence 8999999999863211 23345555455578999999999852 233444443 4 57999
Q ss_pred EeccCCCCCCC---------------CCcc-eEEE---------------------------------------------
Q 029629 59 VTRGEYDEDSR---------------YPET-KTLT--------------------------------------------- 77 (190)
Q Consensus 59 ~v~GNHD~~~~---------------~p~~-~~~~--------------------------------------------- 77 (190)
+++||||.... +|.. ..+.
T Consensus 87 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 166 (313)
T 1ute_A 87 VLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 166 (313)
T ss_dssp ECCCHHHHHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHH
T ss_pred EECCCCccCCCccccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccchHHHHH
Confidence 99999997421 0100 0000
Q ss_pred ----------eCCEEEEEeeCCccCCCC---C---HHHHHHHhhccCccEEEeCCCCCcceEE-EcCeEEEccCCccCCC
Q 029629 78 ----------IGQFKLGICHGHQVIPWG---D---LDSLAMLQRQLDVDILVTGHTHQFKAYK-HEGGVVINPGSATGAY 140 (190)
Q Consensus 78 ----------~~~~~i~~~Hg~~~~~~~---~---~~~~~~~~~~~~~~~vi~GHtH~~~~~~-~~~~~~inpGs~~~~~ 140 (190)
....+|+++|.++..... . .+.+..++++.+++++++||+|...... .+++.++++||.+...
T Consensus 167 ~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~ 246 (313)
T 1ute_A 167 AWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMD 246 (313)
T ss_dssp HHHHHHHHHCCCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCC
T ss_pred HHHHHHHHhCCCCeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcC
Confidence 023578888877653221 1 2345566777899999999999876655 5789999999988532
Q ss_pred CCC----------------CCCCCCeEEEEEEeCCEEEEEEEEeeCCeEEEEEEEeeccc
Q 029629 141 SSF----------------TFDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTA 184 (190)
Q Consensus 141 ~~~----------------~~~~~~~~~ll~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 184 (190)
... ......+|++++++++.++++++..++.. +..+.+.|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~~~~~~~~~~~~~g~~--~~~~~l~~~~ 304 (313)
T 1ute_A 247 PSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKS--LFKTKLPRRA 304 (313)
T ss_dssp CCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETTSCE--EEEEEECCCC
T ss_pred ccccccccCCCcccceeccCcCCCCceEEEEEEcCEEEEEEEcCCCcE--EEEEEecccc
Confidence 100 01123799999999999999999985543 3445555543
No 26
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.81 E-value=5.9e-19 Score=142.68 Aligned_cols=170 Identities=17% Similarity=0.114 Sum_probs=107.0
Q ss_pred eEEEEEeecCCCCCCC----------ChHHHHHhhhCCCCccEEEEcCCCCCH---------HHHHHHhhh---CCcEEE
Q 029629 2 VLVLAIGDLHIPHRAS----------DLPQKFKSMLVPGKIQHIICTGNLSIK---------EVHDYLKSL---CPDLHV 59 (190)
Q Consensus 2 mri~~iSD~H~~~~~~----------~~~~~l~~~~~~~~~D~vi~~GDl~~~---------~~~~~l~~l---~~~~~~ 59 (190)
|||+++||+|++.... ...+.+.+.+.+.++|+|+++||+++. .+.+.|+++ ..|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 8999999999964211 112233333456789999999999971 222334443 468999
Q ss_pred eccCCCCCCCCC---------cc-eEE-----------------------------------------------------
Q 029629 60 TRGEYDEDSRYP---------ET-KTL----------------------------------------------------- 76 (190)
Q Consensus 60 v~GNHD~~~~~p---------~~-~~~----------------------------------------------------- 76 (190)
|+||||...... .. .++
T Consensus 81 v~GNHD~~~~~~~~~~~l~~~g~v~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~~~~~~~~l~~ 160 (333)
T 1ii7_A 81 IEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKR 160 (333)
T ss_dssp ECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCCCSSSEEEEECTTSCEEEEEEETTEEEEEECCCCHHHHHSSTTHHHH
T ss_pred eCCcCCCccCCcCHHHHHHHcCCcEEecccccccccceeeecccCCCceeeccCcCCEEEEecCCcCHHHHHHHHHHHHH
Confidence 999999853110 00 000
Q ss_pred --EeCCEEEEEeeCCccCC-----C-CCHHHHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCC---
Q 029629 77 --TIGQFKLGICHGHQVIP-----W-GDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTF--- 145 (190)
Q Consensus 77 --~~~~~~i~~~Hg~~~~~-----~-~~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~--- 145 (190)
..++.+|+++|+..... . ...-....+ ..++|++++||+|.++....++..+++|||+... ...+
T Consensus 161 ~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~~~l--~~~~dyvalGH~H~~q~~~~~~~~i~ypGS~~~~--~~~E~~~ 236 (333)
T 1ii7_A 161 LFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDL--PEGYLYYALGHIHKRYETSYSGSPVVYPGSLERW--DFGDYEV 236 (333)
T ss_dssp HCCCCSSEEEEEECCBHHHHHTTTCCCCSBCGGGS--CTTCSEEEEESCSSCEEEEETTEEEEECCCSSCC--SGGGCSE
T ss_pred hhCCCCCeEEEEcCChhhcccccccccceecHHHC--CccCCEEEccccccceecCCCCceEEEcCCCeec--ccchhcc
Confidence 01123688888754210 0 000001111 1378999999999999877778999999999642 1111
Q ss_pred -------------CCCCeEEEEEEeCCEEEEEEEEeeCCeEEEEEEE
Q 029629 146 -------------DVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKID 179 (190)
Q Consensus 146 -------------~~~~~~~ll~i~~~~~~~~~~~l~~~~~~~~~~~ 179 (190)
+.+.+|.+++ ..+++++++...++...+++
T Consensus 237 ~~~~~G~~~~p~~~~~kg~~lv~----~~~~~~i~l~~r~~~~~~i~ 279 (333)
T 1ii7_A 237 RYEWDGIKFKERYGVNKGFYIVE----DFKPRFVEIKVRPFIDVKIK 279 (333)
T ss_dssp EEEECSSSEEEEECCCCEEEEEE----TTEEEEEECCCCCEEEEEEE
T ss_pred ccccccccccccccCCCeEEEEe----cCceeEEECCCCceEEEEec
Confidence 2378999998 25789999988777665554
No 27
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.68 E-value=4.7e-17 Score=127.51 Aligned_cols=144 Identities=15% Similarity=0.139 Sum_probs=95.9
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCC-ccEEEEcCCCCC-----HHHHHHHhhhCCcEEEeccCCCCCC-----C-
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGK-IQHIICTGNLSI-----KEVHDYLKSLCPDLHVTRGEYDEDS-----R- 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~-~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~-----~- 69 (190)
+||+++||+|++. .. ++++.+.++..+ +|.++++||+++ .++++.+.++ ++++|+||||... .
T Consensus 19 ~~i~visDiHg~~--~~-l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~--~~~~v~GNHd~~~~~~~~~~ 93 (262)
T 2qjc_A 19 GRVIIVGDIHGCR--AQ-LEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL--GAYSVLGNHDAKLLKLVKKL 93 (262)
T ss_dssp SCEEEECCCTTCH--HH-HHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH--TCEECCCHHHHHHHHHHHCC
T ss_pred CeEEEEeCCCCCH--HH-HHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC--CCEEEeCcChHHHHhhhcCC
Confidence 4999999999742 22 333334444444 499999999998 3677777765 6999999999642 0
Q ss_pred ---------------------CCc---------ceEEEeCCEEEEEeeCCccCCC----CCHHHHHHH------------
Q 029629 70 ---------------------YPE---------TKTLTIGQFKLGICHGHQVIPW----GDLDSLAML------------ 103 (190)
Q Consensus 70 ---------------------~p~---------~~~~~~~~~~i~~~Hg~~~~~~----~~~~~~~~~------------ 103 (190)
++. ...+++++.+++++||+..... .....+..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~~~~~l~~ir~~~~~~~~~~~ 173 (262)
T 2qjc_A 94 GKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQYEDEVTTMRNLIEKEQEATG 173 (262)
T ss_dssp -------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGCCHHHHHHCCEEEEC------
T ss_pred CccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccCCHHHHhhhhhcccccccCCC
Confidence 010 1234566678999999753211 111222110
Q ss_pred -----------------hh-ccCccEEEeCCCCCcceEEEc--CeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCE
Q 029629 104 -----------------QR-QLDVDILVTGHTHQFKAYKHE--GGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLR 160 (190)
Q Consensus 104 -----------------~~-~~~~~~vi~GHtH~~~~~~~~--~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~ 160 (190)
.+ ..+.+++++||||.+.....+ ++..|||||+.. +.++.+.+++++
T Consensus 174 G~~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~~~g----------G~Lt~l~l~~~~ 240 (262)
T 2qjc_A 174 GVTLTATEETNDGGKPWASMWRGPETVVFGHDARRGLQEQYKPLAIGLDSRCVYG----------GRLSAAVFPGGC 240 (262)
T ss_dssp -CCEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGCCBCTTTTTEEECCCBGGGT----------SEEEEEEETTTE
T ss_pred CccccccCCCCcCCCChhhccCCCCEEEECCCccccccccCCCCEEEeeCccccC----------CeeEEEEEcCCc
Confidence 01 135789999999998777777 899999999852 467788887764
No 28
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.68 E-value=1.1e-15 Score=123.86 Aligned_cols=85 Identities=18% Similarity=0.273 Sum_probs=64.6
Q ss_pred HHHHHhhccCccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCC--------CCCCCeEEEEEEeCCEEEEEEEEeeC
Q 029629 99 SLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFT--------FDVNPSFVLMDIDGLRVVVYVYELID 170 (190)
Q Consensus 99 ~~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~--------~~~~~~~~ll~i~~~~~~~~~~~l~~ 170 (190)
.+..++++++++++++||.|.......+++.++..|+.+..+.... .....+|+++++++++++++++...+
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~ 295 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKK 295 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEETTEEEEEECCSSCCCCCCSSCCTTEEEEECSSEEEEEEEETTEEEEEEEETTT
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEeeCCcEEEEeCccccccccCCCCCCcceeecCCCcEEEEEEECCEEEEEEEECCC
Confidence 4566778899999999999999988888999999999876432110 12567999999999999999998444
Q ss_pred CeEEEEEEEeeccc
Q 029629 171 GEVKVDKIDFKKTA 184 (190)
Q Consensus 171 ~~~~~~~~~~~~~~ 184 (190)
++. ..++.+.|++
T Consensus 296 G~v-ld~~~i~k~~ 308 (342)
T 3tgh_A 296 GEV-IYTHKLNIKK 308 (342)
T ss_dssp TEE-EEEEEEECCC
T ss_pred CcE-EEEEEEECCC
Confidence 444 5666666544
No 29
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.56 E-value=1.4e-13 Score=114.51 Aligned_cols=179 Identities=17% Similarity=0.174 Sum_probs=112.2
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCC-CCccEEEEcCCCCCH--------H----HHHHHhhh--CCcEEEeccCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVP-GKIQHIICTGNLSIK--------E----VHDYLKSL--CPDLHVTRGEYDE 66 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~~--------~----~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
+||+++||+|... ...+.+.++.+. .++|+|+++||++.. . ..+.++.+ ..|+++++||||.
T Consensus 127 ~~f~~~gD~~~~~---~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 127 YVFGLIGDIGQTH---DSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEI 203 (426)
T ss_dssp EEEEEECSCTTBH---HHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGC
T ss_pred eEEEEEEeCCCCC---chHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEecccccc
Confidence 7999999999742 123445554433 489999999999952 1 12333333 3689999999997
Q ss_pred CCC-----------------CC---------cceEEEeCC-----------------------------------EEEEE
Q 029629 67 DSR-----------------YP---------ETKTLTIGQ-----------------------------------FKLGI 85 (190)
Q Consensus 67 ~~~-----------------~p---------~~~~~~~~~-----------------------------------~~i~~ 85 (190)
... +| ....++.++ ++|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 283 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVL 283 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEE
T ss_pred ccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEE
Confidence 521 12 112222222 45666
Q ss_pred eeCCccCCC----C-C---HHHHHHHhhccCccEEEeCCCCCcceEE-------------------EcCeEEEccCCccC
Q 029629 86 CHGHQVIPW----G-D---LDSLAMLQRQLDVDILVTGHTHQFKAYK-------------------HEGGVVINPGSATG 138 (190)
Q Consensus 86 ~Hg~~~~~~----~-~---~~~~~~~~~~~~~~~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~~ 138 (190)
.|...+... . . .+.+..++++++++++++||+|...... .+++.+|..|+.|.
T Consensus 284 ~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 284 VHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCC
T ss_pred eccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCcc
Confidence 675443211 0 1 2345667778899999999999865431 24678888888764
Q ss_pred CCCC---CC---------CCCCCeEEEEEEeC-CEEEEEEEEeeCCe-EEEEEEEeecc
Q 029629 139 AYSS---FT---------FDVNPSFVLMDIDG-LRVVVYVYELIDGE-VKVDKIDFKKT 183 (190)
Q Consensus 139 ~~~~---~~---------~~~~~~~~ll~i~~-~~~~~~~~~l~~~~-~~~~~~~~~~~ 183 (190)
.... .. .....+|+.+++.+ ..+.+++++-.+++ .-.+++.+.|+
T Consensus 364 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 364 SEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp TTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECS
T ss_pred ccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEec
Confidence 3210 00 12346899999954 46888998766555 35678888775
No 30
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.46 E-value=2.5e-12 Score=106.89 Aligned_cols=180 Identities=16% Similarity=0.165 Sum_probs=109.4
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCC-CCccEEEEcCCCCCHH------------HHHHHhhh--CCcEEEeccCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVP-GKIQHIICTGNLSIKE------------VHDYLKSL--CPDLHVTRGEYDE 66 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~~~------------~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
|||+++||+|.... ..+.+..+.+. .++|+|+++||+++.. ..+.++.+ ..|+++++||||.
T Consensus 120 ~~f~~igD~~~~~~---~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~ 196 (424)
T 2qfp_A 120 YTFGLIGDLGQSFD---SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEI 196 (424)
T ss_dssp EEEEEECSCTTBHH---HHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHH
T ss_pred eEEEEEEeCCCCCC---hHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCccc
Confidence 79999999997421 22344444433 3899999999999621 12233322 2689999999996
Q ss_pred CC-----------------CCCc---------ceEEEeCC-----------------------------------EEEEE
Q 029629 67 DS-----------------RYPE---------TKTLTIGQ-----------------------------------FKLGI 85 (190)
Q Consensus 67 ~~-----------------~~p~---------~~~~~~~~-----------------------------------~~i~~ 85 (190)
.. .+|. ...++.++ +.|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 276 (424)
T 2qfp_A 197 EFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVL 276 (424)
T ss_dssp CCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEE
T ss_pred ccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEE
Confidence 42 1121 11233222 44556
Q ss_pred eeCCccCCC----CC----HHHHHHHhhccCccEEEeCCCCCcceEE-------------------EcCeEEEccCCccC
Q 029629 86 CHGHQVIPW----GD----LDSLAMLQRQLDVDILVTGHTHQFKAYK-------------------HEGGVVINPGSATG 138 (190)
Q Consensus 86 ~Hg~~~~~~----~~----~~~~~~~~~~~~~~~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~~ 138 (190)
.|...+... .+ .+.+..++++++++++++||+|...... .++..+|..|+.+.
T Consensus 277 ~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~ 356 (424)
T 2qfp_A 277 MHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGN 356 (424)
T ss_dssp CSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCT
T ss_pred eCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCC
Confidence 664433210 11 1345567778899999999999854321 13467787787654
Q ss_pred CCCC---CC---------CCCCCeEEEEEEeC-CEEEEEEEEeeCCe-EEEEEEEeeccc
Q 029629 139 AYSS---FT---------FDVNPSFVLMDIDG-LRVVVYVYELIDGE-VKVDKIDFKKTA 184 (190)
Q Consensus 139 ~~~~---~~---------~~~~~~~~ll~i~~-~~~~~~~~~l~~~~-~~~~~~~~~~~~ 184 (190)
.... .. .....+|+.+++.+ ..+..+++.-.+++ +..+++.+.|+.
T Consensus 357 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~ 416 (424)
T 2qfp_A 357 YGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 416 (424)
T ss_dssp TSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred ccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence 3210 00 11346899999954 46888888765555 357888888764
No 31
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.42 E-value=8.9e-13 Score=106.87 Aligned_cols=63 Identities=21% Similarity=0.189 Sum_probs=44.3
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCC--------CCccEEEEcCCCCC-----HHHHHHHhhhC-------CcEEEe
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVP--------GKIQHIICTGNLSI-----KEVHDYLKSLC-------PDLHVT 60 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~--------~~~D~vi~~GDl~~-----~~~~~~l~~l~-------~~~~~v 60 (190)
+||++++||+|++. ..+ .++.+.+.. .++|.++++||++| .++++.|.++. .+++++
T Consensus 70 ~~~i~vigDiHG~~--~~l-~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v 146 (342)
T 2z72_A 70 IKKVVALSDVHGQY--DVL-LTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLL 146 (342)
T ss_dssp CCEEEEECCCTTCH--HHH-HHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEEECCCCCH--HHH-HHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 48999999999853 223 333332221 15799999999998 36677666542 469999
Q ss_pred ccCCCC
Q 029629 61 RGEYDE 66 (190)
Q Consensus 61 ~GNHD~ 66 (190)
+||||.
T Consensus 147 ~GNHE~ 152 (342)
T 2z72_A 147 MGNHEQ 152 (342)
T ss_dssp CCHHHH
T ss_pred ecCCcH
Confidence 999996
No 32
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.38 E-value=1.2e-11 Score=104.20 Aligned_cols=156 Identities=19% Similarity=0.204 Sum_probs=93.8
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCC-CccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEeccCCCCCC---
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPG-KIQHIICTGNLSI-----KEVHDYLKSL----CPDLHVTRGEYDEDS--- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~~--- 68 (190)
||++++||+|++. .++.+.+ +..... ..|.++++||++| .+++..|..+ ..++++++||||...
T Consensus 213 ~~~~vigDiHG~~--~~l~~~l-~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~ 289 (477)
T 1wao_1 213 EKITVCGDTHGQF--YDLLNIF-ELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQ 289 (477)
T ss_dssp CEEEEECBCTTCH--HHHHHHH-HHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHH
T ss_pred cceEEEeCCCCCH--HHHHHHH-HHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhh
Confidence 7899999999852 2333333 333322 2467999999998 3677766654 357999999999642
Q ss_pred -------------------------CCCcceEEEeCCEEEEEeeCCccCCCC----------------------------
Q 029629 69 -------------------------RYPETKTLTIGQFKLGICHGHQVIPWG---------------------------- 95 (190)
Q Consensus 69 -------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~~---------------------------- 95 (190)
.+|... .++ .+++++||++..+..
T Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~lp~~~--~~~-~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~~~~dllWsd 366 (477)
T 1wao_1 290 IYGFEGEVKAKYTAQMYELFSEVFEWLPLAQ--CIN-GKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSD 366 (477)
T ss_dssp HHSHHHHHHHHSCTTHHHHHHHHHTTSCSEE--EET-TTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSSHHHHHHHCE
T ss_pred hcChHHHHHHHhhHHHHHHHHHHhccCCcEE--EEc-CcEEEECCCCCccccCCHHHHHhccCCCCCchhhhhhhhccCC
Confidence 233322 233 469999997622110
Q ss_pred ------------------CHHHHHHHhhccCccEEEeCCCCCcceEEE--cCe-EEEccCCccCCCCCCCCCCCCeEEEE
Q 029629 96 ------------------DLDSLAMLQRQLDVDILVTGHTHQFKAYKH--EGG-VVINPGSATGAYSSFTFDVNPSFVLM 154 (190)
Q Consensus 96 ------------------~~~~~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~-~~inpGs~~~~~~~~~~~~~~~~~ll 154 (190)
+.+.+.++++..+.++++.||++.+..+.. ++. .-|-+.+ . +.... ...-+++
T Consensus 367 p~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~-~---y~~~~--~n~~~~~ 440 (477)
T 1wao_1 367 PQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAP-N---YCDQM--GNKASYI 440 (477)
T ss_dssp ECSSSSCEECTTSSSEEECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCT-T---TTSSS--CCEEEEE
T ss_pred CCccCCcCcCCCCCceeECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCc-c---cccCC--CccEEEE
Confidence 123456677788999999999998765443 332 2222211 1 11111 2334677
Q ss_pred EEeCCEEEEEEEEee
Q 029629 155 DIDGLRVVVYVYELI 169 (190)
Q Consensus 155 ~i~~~~~~~~~~~l~ 169 (190)
.++++....++...+
T Consensus 441 ~~~~~~~~~~~~~~~ 455 (477)
T 1wao_1 441 HLQGSDLRPQFHQFT 455 (477)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEECCCCeEEEEEEe
Confidence 776666665555543
No 33
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.38 E-value=1.1e-12 Score=103.53 Aligned_cols=63 Identities=24% Similarity=0.260 Sum_probs=46.8
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCC-CCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEeccCCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVP-GKIQHIICTGNLSI-----KEVHDYLKSLCPDLHVTRGEYDED 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
||++++||+|++. ..+ ..+.+.+.. .++|.++++||+++ .++++.|.++..++++|+||||..
T Consensus 1 M~i~vigDiHG~~--~~l-~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCY--DEL-IALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCH--HHH-HHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHHHH
T ss_pred CeEEEEecCCCCH--HHH-HHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCcHH
Confidence 8999999999853 223 333333433 46899999999998 478888888755799999999954
No 34
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=99.21 E-value=4.5e-10 Score=89.59 Aligned_cols=157 Identities=20% Similarity=0.208 Sum_probs=92.4
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCC-CCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEeccCCCCCC---
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVP-GKIQHIICTGNLSI-----KEVHDYLKSL----CPDLHVTRGEYDEDS--- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~~--- 68 (190)
||++++||+|++. .++.+.+.. ... ...+.++++||++| .+++..|..+ ...+++++||||...
T Consensus 60 ~ri~viGDIHG~~--~~L~~ll~~-~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~ 136 (315)
T 3h63_A 60 EKITVCGDTHGQF--YDLLNIFEL-NGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQ 136 (315)
T ss_dssp CEEEEECCCTTCH--HHHHHHHHH-HCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHH
T ss_pred ceEEEEecCCCCH--HHHHHHHHH-hCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccc
Confidence 7899999999853 233333333 322 23356999999999 3677777655 246999999999652
Q ss_pred -------------------------CCCcceEEEeCCEEEEEeeCCccCCCC----------------------------
Q 029629 69 -------------------------RYPETKTLTIGQFKLGICHGHQVIPWG---------------------------- 95 (190)
Q Consensus 69 -------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~~---------------------------- 95 (190)
.+|... .++ .+++++||+...+..
T Consensus 137 ~ygf~~e~~~k~~~~l~~~~~~~f~~LPla~--ii~-~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g~~~dllWsD 213 (315)
T 3h63_A 137 IYGFEGEVKAKYTAQMYELFSEVFEWLPLAQ--CIN-GKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSD 213 (315)
T ss_dssp HHSHHHHHHHHSCHHHHHHHHHHHTTSCSEE--EET-TTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSSHHHHHHHCE
T ss_pred cccccHHHHHHhhhHHHHHHHHHHhcCCcEE--EEc-CCEEEeCCCCCCcccCCHHHHHhCcccccccccchhhhheecC
Confidence 234332 233 469999998732210
Q ss_pred ------------------CHHHHHHHhhccCccEEEeCCCCCcceEE--EcCeEEEccCCccCCCCCCCCCCCCeEEEEE
Q 029629 96 ------------------DLDSLAMLQRQLDVDILVTGHTHQFKAYK--HEGGVVINPGSATGAYSSFTFDVNPSFVLMD 155 (190)
Q Consensus 96 ------------------~~~~~~~~~~~~~~~~vi~GHtH~~~~~~--~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~ 155 (190)
+++.+.+++++.+.++++-||.=....+. .++. ++..=|. |.+...-++.+ |++.
T Consensus 214 P~~~~g~~~s~RG~g~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~-~iTvfSa--pnY~~~~~N~~--a~~~ 288 (315)
T 3h63_A 214 PQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGR-CVTVFSA--PNYCDQMGNKA--SYIH 288 (315)
T ss_dssp ECSSSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGT-EEEECCC--TTGGGTSCCCE--EEEE
T ss_pred CCCCCCcCcCCCCceEEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCe-EEEEECC--cccCCCCCccE--EEEE
Confidence 12335677778899999999998644333 2332 2211111 11111122334 6666
Q ss_pred EeCCEEEEEEEEee
Q 029629 156 IDGLRVVVYVYELI 169 (190)
Q Consensus 156 i~~~~~~~~~~~l~ 169 (190)
+++...+.++...+
T Consensus 289 ~~~~~~~~~~~~f~ 302 (315)
T 3h63_A 289 LQGSDLRPQFHQFT 302 (315)
T ss_dssp EETTEEEEEEEEEC
T ss_pred EECCCCeEeeEEEe
Confidence 76666655555443
No 35
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=99.18 E-value=1.8e-09 Score=91.95 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCC-----Ch--HHHHHhhhCCC----Cc-cEEEEcCCCCC----------HHHHHHHhhhCCcEEE
Q 029629 2 VLVLAIGDLHIPHRAS-----DL--PQKFKSMLVPG----KI-QHIICTGNLSI----------KEVHDYLKSLCPDLHV 59 (190)
Q Consensus 2 mri~~iSD~H~~~~~~-----~~--~~~l~~~~~~~----~~-D~vi~~GDl~~----------~~~~~~l~~l~~~~~~ 59 (190)
|+|+++||+|+..... .+ .+.+.+.++++ ++ ++++.+||+++ ....+.|+.++ +-++
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg-~d~~ 87 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG-YDAM 87 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT-CCEE
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC-CCEE
Confidence 7999999999853211 11 12222222211 34 79999999987 14567788876 4578
Q ss_pred eccCCCCC
Q 029629 60 TRGEYDED 67 (190)
Q Consensus 60 v~GNHD~~ 67 (190)
+.||||..
T Consensus 88 ~~GNHEfd 95 (516)
T 1hp1_A 88 AIGNHEFD 95 (516)
T ss_dssp ECCGGGGS
T ss_pred eecccccc
Confidence 99999975
No 36
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=99.16 E-value=1.5e-09 Score=86.58 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=45.9
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEeccCCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSL----CPDLHVTRGEYDED 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
|+++++||+|++. .++ .++.+.......+.++++||++| .+++..|..+ ...+++++||||..
T Consensus 50 ~~i~viGDIHG~~--~~L-~~ll~~~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 50 CPVTVCGDVHGQF--HDL-MELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp SSEEEECCCTTCH--HHH-HHHHHHHCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred CCEEEEecCCCCH--HHH-HHHHHHcCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 6899999999853 233 33334444456788999999999 3677777665 23699999999986
No 37
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=99.10 E-value=3.8e-09 Score=90.12 Aligned_cols=32 Identities=38% Similarity=0.624 Sum_probs=28.8
Q ss_pred cCccEEEeCCCCCcceEEEcCeEEEccCCccC
Q 029629 107 LDVDILVTGHTHQFKAYKHEGGVVINPGSATG 138 (190)
Q Consensus 107 ~~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~ 138 (190)
.++|++++||+|.......+++++++||+.+.
T Consensus 238 ~giDlIlgGHtH~~~~~~v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 238 KDIDIFITGHQHRQIAERFKQTAVIQPGTRGT 269 (527)
T ss_dssp GGCSEEECCSSCCEEEEEETTEEEEEECSTTS
T ss_pred CCCcEEEECCCCcccceEECCEEEeccChhhC
Confidence 58999999999998877789999999999873
No 38
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=99.09 E-value=2e-09 Score=85.26 Aligned_cols=116 Identities=19% Similarity=0.192 Sum_probs=77.4
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhhC----CcEEEeccCCCCCC----
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSLC----PDLHVTRGEYDEDS---- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~----~~~~~v~GNHD~~~---- 68 (190)
++++++||+|++. .++.+. .+.......+.++++||++| .+++..|..+. ..+++++||||...
T Consensus 56 ~~i~viGDIHG~~--~~L~~l-l~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ 132 (299)
T 3e7a_A 56 APLKICGDIHGQY--YDLLRL-FEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 132 (299)
T ss_dssp SSEEEECBCTTCH--HHHHHH-HHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHH
T ss_pred CCEEEEecCCCCH--HHHHHH-HHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhccc
Confidence 4799999999853 233333 33344456688999999999 36777666542 46999999999752
Q ss_pred ------------------------CCCcceEEEeCCEEEEEeeCCccCC--------------------------C----
Q 029629 69 ------------------------RYPETKTLTIGQFKLGICHGHQVIP--------------------------W---- 94 (190)
Q Consensus 69 ------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~--------------------------~---- 94 (190)
.+|... .++ .+++++||+.... |
T Consensus 133 ygF~~e~~~ky~~~l~~~~~~~f~~LPlaa--ii~-~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~~~~dllWsDP~ 209 (299)
T 3e7a_A 133 YGFYDECKRRYNIKLWKTFTDCFNCLPIAA--IVD-EKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPD 209 (299)
T ss_dssp HSHHHHHHHHSCHHHHHHHHHHHTTCCCEE--EET-TTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSSHHHHHHHCEEC
T ss_pred ccchHHHHHHhhHHHHHHHHHHHhhCCceE--EEC-CeEEEEcCccCcccCCHHHHHhccCCCcCCcchhhhhhhcCCcc
Confidence 234332 233 4699999975210 0
Q ss_pred ----------------CCHHHHHHHhhccCccEEEeCCCCCcceE
Q 029629 95 ----------------GDLDSLAMLQRQLDVDILVTGHTHQFKAY 123 (190)
Q Consensus 95 ----------------~~~~~~~~~~~~~~~~~vi~GHtH~~~~~ 123 (190)
.+++.+.++++..+.++++=||.=....+
T Consensus 210 ~~~~~~~~~~RG~~~~fG~~~~~~fl~~n~l~~IiR~Hq~v~~Gy 254 (299)
T 3e7a_A 210 KDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGY 254 (299)
T ss_dssp TTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSE
T ss_pred ccccCcccCCCCcceeeCHHHHHHHHHHCCCeEEEEcCeeeecce
Confidence 01334677778889999999999765443
No 39
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=99.03 E-value=1.6e-09 Score=87.03 Aligned_cols=63 Identities=16% Similarity=0.066 Sum_probs=45.7
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhh----CCcEEEeccCCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSL----CPDLHVTRGEYDED 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~~~~v~GNHD~~ 67 (190)
|+++++||+|++. .++.+ +.+.......|.++++||++| .+++++|..+ ...+++++||||..
T Consensus 57 ~~i~viGDIHG~~--~~L~~-ll~~~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQY--YDLLR-LFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCH--HHHHH-HHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCH--HHHHH-HHHHhCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 5799999999853 23333 333344445688999999999 3777777654 24699999999975
No 40
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=99.03 E-value=3.2e-09 Score=85.32 Aligned_cols=116 Identities=17% Similarity=0.177 Sum_probs=76.8
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCC-CccEEEEcCCCCC-----HHHHHHHhhhC----CcEEEeccCCCCCC---
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPG-KIQHIICTGNLSI-----KEVHDYLKSLC----PDLHVTRGEYDEDS--- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l~----~~~~~v~GNHD~~~--- 68 (190)
||+.++||+|++. .++.+.+ +.+... ..+.++++||++| .+++..|..+. ..+++++||||...
T Consensus 64 ~ri~viGDIHG~~--~~L~~ll-~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~ 140 (335)
T 3icf_A 64 VKISVCGDTHGQF--YDVLNLF-RKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNK 140 (335)
T ss_dssp CEEEEECCCTTCH--HHHHHHH-HHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHH
T ss_pred ceEEEEecCCCCH--HHHHHHH-HHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhh
Confidence 7899999999853 2333333 333322 2356999999999 36777666542 46999999999642
Q ss_pred -------------------------CCCcceEEEeCCEEEEEeeCCccCCC---------------------------C-
Q 029629 69 -------------------------RYPETKTLTIGQFKLGICHGHQVIPW---------------------------G- 95 (190)
Q Consensus 69 -------------------------~~p~~~~~~~~~~~i~~~Hg~~~~~~---------------------------~- 95 (190)
.+|... .+++ +++++||+...+. .
T Consensus 141 ~ygf~~e~~~k~~~~l~~~~~~~f~~LPlaa--ii~~-~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g~~~dlLWSD 217 (335)
T 3icf_A 141 IYGFEDECKYKYSQRIFNMFAQSFESLPLAT--LINN-DYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWAD 217 (335)
T ss_dssp HHSHHHHHHHHSCHHHHHHHHHHHTTSCSEE--EETT-TEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSSHHHHHHHCE
T ss_pred ccccchHhHhhccHHHHHHHHHHHhhcceeE--EEcC-cEEEecCCcCCCccCCHHHHHhCccccccccccchhhhhccC
Confidence 234332 3343 7999999873211 0
Q ss_pred ------------------CHHHHHHHhhccCccEEEeCCCCCcceE
Q 029629 96 ------------------DLDSLAMLQRQLDVDILVTGHTHQFKAY 123 (190)
Q Consensus 96 ------------------~~~~~~~~~~~~~~~~vi~GHtH~~~~~ 123 (190)
+++.+.+++++.+.++++=||.=....+
T Consensus 218 P~~~~g~~~s~RG~g~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy 263 (335)
T 3icf_A 218 PQEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGGV 263 (335)
T ss_dssp ECSSSSEEECCCC--EEECHHHHHHHHHHTTCSEEEECSSCCTEEE
T ss_pred CCCcCCcccCCCCCceeeCHHHHHHHHHHCCCeEEEEcCceecCeE
Confidence 1233667788889999999999764443
No 41
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=98.98 E-value=1e-08 Score=86.21 Aligned_cols=63 Identities=22% Similarity=0.169 Sum_probs=45.7
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhhC----CcEEEeccCCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSLC----PDLHVTRGEYDED 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~----~~~~~v~GNHD~~ 67 (190)
|+++++||+|++. .++.+ +.++......|.++++||++| .+++.+|..+. ..+++++||||..
T Consensus 83 ~pI~VIGDIHGq~--~dL~~-LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQF--FDLMK-LFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCH--HHHHH-HHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCH--HHHHH-HHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 6899999999853 23333 333333445799999999999 36777776653 3599999999975
No 42
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.95 E-value=4.1e-08 Score=83.41 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=26.4
Q ss_pred cCccEEEeCCCCCcc--eEEEcCeEEEccCCccC
Q 029629 107 LDVDILVTGHTHQFK--AYKHEGGVVINPGSATG 138 (190)
Q Consensus 107 ~~~~~vi~GHtH~~~--~~~~~~~~~inpGs~~~ 138 (190)
.++|++++||+|... ....+++.++.+|+.+.
T Consensus 224 ~giDlIlgGHtH~~~~~~~~~~~~~ivqag~~g~ 257 (509)
T 3ive_A 224 KGLDILITGHAHVGTPEPIKVGNTLILSTDSGGI 257 (509)
T ss_dssp SSCCEEEEESSCCCCSSCEEETTEEEECCCSTTS
T ss_pred CCCcEEEeCCcCccCCCCeeeCCEEEEecChhhc
Confidence 479999999999854 34678999999999873
No 43
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.92 E-value=3.9e-08 Score=84.34 Aligned_cols=65 Identities=9% Similarity=0.048 Sum_probs=42.6
Q ss_pred eEEEEEeecCCCCCCC------------C--hHHHHHhhhCCCCcc-EEEEcCCCCC----------HHHHHHHhhhCCc
Q 029629 2 VLVLAIGDLHIPHRAS------------D--LPQKFKSMLVPGKIQ-HIICTGNLSI----------KEVHDYLKSLCPD 56 (190)
Q Consensus 2 mri~~iSD~H~~~~~~------------~--~~~~l~~~~~~~~~D-~vi~~GDl~~----------~~~~~~l~~l~~~ 56 (190)
++|+++||+|+..... . ..+.+.+.++++.+| +++.+||+++ ....+.|+.++ +
T Consensus 30 l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg-~ 108 (552)
T 2z1a_A 30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLR-Y 108 (552)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTT-C
T ss_pred EEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcC-C
Confidence 6899999999742211 1 112222223334566 8899999997 24556777775 3
Q ss_pred EEEeccCCCCC
Q 029629 57 LHVTRGEYDED 67 (190)
Q Consensus 57 ~~~v~GNHD~~ 67 (190)
-+++.||||..
T Consensus 109 d~~~lGNHEfd 119 (552)
T 2z1a_A 109 RAMALGNHEFD 119 (552)
T ss_dssp CEEECCGGGGT
T ss_pred Ccccccccccc
Confidence 57889999975
No 44
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=98.91 E-value=1.9e-08 Score=81.30 Aligned_cols=63 Identities=22% Similarity=0.169 Sum_probs=45.7
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC-----HHHHHHHhhhC----CcEEEeccCCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI-----KEVHDYLKSLC----PDLHVTRGEYDED 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~----~~~~~v~GNHD~~ 67 (190)
++++++||+|++. .++.+ +.+.......|.++++||++| .+++..|..+. ..+++++||||..
T Consensus 70 ~pi~ViGDIHG~~--~dL~~-ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQF--FDLMK-LFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCH--HHHHH-HHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCH--HHHHH-HHHhcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 5799999999853 23333 333344556789999999999 36677665542 3699999999975
No 45
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.86 E-value=1.7e-07 Score=80.53 Aligned_cols=119 Identities=15% Similarity=0.202 Sum_probs=75.0
Q ss_pred cc-EEEEcCCCCC----------HHHHHHHhhhCCcEEEeccCCCCCC------------CC-----------------C
Q 029629 32 IQ-HIICTGNLSI----------KEVHDYLKSLCPDLHVTRGEYDEDS------------RY-----------------P 71 (190)
Q Consensus 32 ~D-~vi~~GDl~~----------~~~~~~l~~l~~~~~~v~GNHD~~~------------~~-----------------p 71 (190)
+| +++.+||+++ ....+.|+.++.++ ++ ||||... .+ +
T Consensus 123 pd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~-~~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~ 200 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDH-MV-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFP 200 (562)
T ss_dssp CCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCE-EC-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSC
T ss_pred CCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcE-Ee-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCcccC
Confidence 78 8999999997 24567788887665 47 9999742 11 1
Q ss_pred cceEEEeCCEEEEEeeCCcc-----CC--------CCC-HH--------------------------HHHHHhhc-cCcc
Q 029629 72 ETKTLTIGQFKLGICHGHQV-----IP--------WGD-LD--------------------------SLAMLQRQ-LDVD 110 (190)
Q Consensus 72 ~~~~~~~~~~~i~~~Hg~~~-----~~--------~~~-~~--------------------------~~~~~~~~-~~~~ 110 (190)
...+++.+|.+|.++--... .+ ..+ .+ .-.+++++ .++|
T Consensus 201 py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~iIvLsH~g~~~d~~la~~~~giD 280 (562)
T 2wdc_A 201 AYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGID 280 (562)
T ss_dssp SEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTCSEEEEEECSCHHHHHHHHTTSSSCC
T ss_pred CeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCCCEEEEEeCCCCcchHHHHhcCCCCc
Confidence 23456778888877652110 00 011 00 01123433 5899
Q ss_pred EEEeCCCCCcce--EEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCCEE
Q 029629 111 ILVTGHTHQFKA--YKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGLRV 161 (190)
Q Consensus 111 ~vi~GHtH~~~~--~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~~ 161 (190)
++++||+|.... ...++++++.+|+.+.. -+..-++++++++
T Consensus 281 lIlgGHtH~~~~~~~~~~~t~vvqag~~g~~---------lg~i~l~~~~g~v 324 (562)
T 2wdc_A 281 LILSGHTHDLTPRPWRVGKTWIVAGSAAGKA---------LMRVDLKLWKGGI 324 (562)
T ss_dssp EEEECSSCCCCSSCEEETTEEEEECCSTTCE---------EEEEEEEEETTEE
T ss_pred EEEeCCCCCCCccCEEECCEEEEecCccccE---------EEEEEEEEeCCcE
Confidence 999999998653 34588999999998742 3445555666654
No 46
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.81 E-value=1.5e-07 Score=81.23 Aligned_cols=65 Identities=14% Similarity=0.043 Sum_probs=42.3
Q ss_pred eEEEEEeecCCCCCCCC---------------hHHHHHhh---hCCCCcc-EEEEcCCCCC----------HHHHHHHhh
Q 029629 2 VLVLAIGDLHIPHRASD---------------LPQKFKSM---LVPGKIQ-HIICTGNLSI----------KEVHDYLKS 52 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~---------------~~~~l~~~---~~~~~~D-~vi~~GDl~~----------~~~~~~l~~ 52 (190)
++|+++||+|+...... =..++..+ ++++.++ +++.+||+++ ....+.|+.
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~ 92 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMNA 92 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHHH
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHHh
Confidence 68999999997533211 02222222 2223444 8899999997 246677888
Q ss_pred hCCcEEEeccCCCCC
Q 029629 53 LCPDLHVTRGEYDED 67 (190)
Q Consensus 53 l~~~~~~v~GNHD~~ 67 (190)
++. -+++.||||..
T Consensus 93 lg~-D~~tlGNHEfd 106 (579)
T 3ztv_A 93 GNF-HYFTLGNHEFD 106 (579)
T ss_dssp HTC-SEEECCSGGGT
T ss_pred cCc-Ceeeccccccc
Confidence 764 46789999975
No 47
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=98.71 E-value=1.6e-07 Score=78.41 Aligned_cols=149 Identities=18% Similarity=0.223 Sum_probs=92.8
Q ss_pred EEEEEeecCCCCCCCC---hHHHHHhhhC-----------CCCccEEEEcCCCCCH-----------------------H
Q 029629 3 LVLAIGDLHIPHRASD---LPQKFKSMLV-----------PGKIQHIICTGNLSIK-----------------------E 45 (190)
Q Consensus 3 ri~~iSD~H~~~~~~~---~~~~l~~~~~-----------~~~~D~vi~~GDl~~~-----------------------~ 45 (190)
+++++||+|++..... -++.|.+++. ..++..+|++||+++. +
T Consensus 202 ~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~~~ 281 (476)
T 3e0j_A 202 FVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVE 281 (476)
T ss_dssp EEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHHHH
T ss_pred EEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhhHH
Confidence 6999999999753211 1234445442 1458999999999971 1
Q ss_pred HHH----HHhhh--CCcEEEeccCCCCCC-CCC----------------------cceEEEeCCEEEEEeeCCcc-----
Q 029629 46 VHD----YLKSL--CPDLHVTRGEYDEDS-RYP----------------------ETKTLTIGQFKLGICHGHQV----- 91 (190)
Q Consensus 46 ~~~----~l~~l--~~~~~~v~GNHD~~~-~~p----------------------~~~~~~~~~~~i~~~Hg~~~----- 91 (190)
.++ +|.++ ..|+.+.|||||... .+| ....++++|.+|+.+||-..
T Consensus 282 ~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqnidDi~k 361 (476)
T 3e0j_A 282 AVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFR 361 (476)
T ss_dssp HHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCCHHHHHh
Confidence 112 22333 268999999999863 122 35678899999999998542
Q ss_pred -CCCCCHHH-HHHHh-------------------------hccCccEEEeCCCCCcceEEEc-----CeEEEccCCccCC
Q 029629 92 -IPWGDLDS-LAMLQ-------------------------RQLDVDILVTGHTHQFKAYKHE-----GGVVINPGSATGA 139 (190)
Q Consensus 92 -~~~~~~~~-~~~~~-------------------------~~~~~~~vi~GHtH~~~~~~~~-----~~~~inpGs~~~~ 139 (190)
.+..++.+ ++..+ -+.-++++++||.|........ .+++|+..+.+.
T Consensus 362 y~~~~~~l~~me~~LkwrHlAPTaPdTl~~yP~~~~DpfVi~~~PhVyf~Gnq~~f~t~~~~~~~~~~vrLv~VP~Fs~- 440 (476)
T 3e0j_A 362 YSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFSA- 440 (476)
T ss_dssp HSCCCCHHHHHHHHHHBTCSCTTSCCC------CCSCTTSCSSCCSEEEEEEESSCEEEEEECSSCCEEEEEEEECHHH-
T ss_pred cCCCCCHHHHHHHHHHHhccCCCCCCceeeccCCCCCceeecCCCcEEEeCCCCccceeEEecCCCCeEEEEEcCCcCC-
Confidence 11112211 11111 1234889999999997765542 256677666653
Q ss_pred CCCCCCCCCCeEEEEEEeCCE
Q 029629 140 YSSFTFDVNPSFVLMDIDGLR 160 (190)
Q Consensus 140 ~~~~~~~~~~~~~ll~i~~~~ 160 (190)
.++.++++++.-.
T Consensus 441 --------T~~~vLvdl~tLe 453 (476)
T 3e0j_A 441 --------TQTACLVNLRSLA 453 (476)
T ss_dssp --------HCEEEEEETTTTB
T ss_pred --------CCeEEEEECcccc
Confidence 3677777776543
No 48
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.68 E-value=6.8e-07 Score=76.53 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=41.9
Q ss_pred eEEEEEeecCCCCCCCC--------------hHHHHHhh---hCCCCc-cEEEEcCCCCC----------HHHHHHHhhh
Q 029629 2 VLVLAIGDLHIPHRASD--------------LPQKFKSM---LVPGKI-QHIICTGNLSI----------KEVHDYLKSL 53 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~--------------~~~~l~~~---~~~~~~-D~vi~~GDl~~----------~~~~~~l~~l 53 (190)
++|+++||+|+...... -..++..+ ++++.+ ++++.+||+++ ....+.|+.+
T Consensus 26 l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~l 105 (546)
T 4h2g_A 26 LTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL 105 (546)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHH
T ss_pred EEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHhc
Confidence 68999999997432210 01222222 222334 69999999997 2456777777
Q ss_pred CCcEEEeccCCCCC
Q 029629 54 CPDLHVTRGEYDED 67 (190)
Q Consensus 54 ~~~~~~v~GNHD~~ 67 (190)
+. -+++.||||..
T Consensus 106 g~-d~~~~GNHEfd 118 (546)
T 4h2g_A 106 RY-DAMALGNHEFD 118 (546)
T ss_dssp TC-SEEECCGGGGT
T ss_pred CC-cEEeccCcccc
Confidence 64 46889999953
No 49
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.58 E-value=1.5e-06 Score=70.09 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=26.1
Q ss_pred ccCccEEEeCCCCCcce--------------EEEcCeEEEccCCccC
Q 029629 106 QLDVDILVTGHTHQFKA--------------YKHEGGVVINPGSATG 138 (190)
Q Consensus 106 ~~~~~~vi~GHtH~~~~--------------~~~~~~~~inpGs~~~ 138 (190)
-.++|+++.||+|.... ...++++++.||+.+.
T Consensus 232 v~gID~IlgGHsH~~~~~~~~~~~~g~~~~~g~vn~v~vvqag~~G~ 278 (339)
T 3jyf_A 232 VPGVDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGD 278 (339)
T ss_dssp STTCCEEEECSSCSEESSGGGTTSTTEETTTTEETTEEEEEECSTTS
T ss_pred CCCCCEEEeCCCccccccccccccCCccccCccCCCEEEEcCCcccc
Confidence 45899999999998542 1456889999999884
No 50
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.47 E-value=4e-06 Score=67.69 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=25.5
Q ss_pred cCccEEEeCCCCCcce--------------EEEcCeEEEccCCccC
Q 029629 107 LDVDILVTGHTHQFKA--------------YKHEGGVVINPGSATG 138 (190)
Q Consensus 107 ~~~~~vi~GHtH~~~~--------------~~~~~~~~inpGs~~~ 138 (190)
.++|+++.||+|.... ...++++++.||+.+.
T Consensus 240 ~giD~IigGHsH~~~~~~~~~~~~~~~~~~g~v~~~~vvqag~~g~ 285 (341)
T 3gve_A 240 KGIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVMPSSWGK 285 (341)
T ss_dssp SCCCEEEECSSCCEESCGGGTTSTTEETTTTEETTEEEEEECSTTS
T ss_pred CCCcEEEECCCCccCCCcccccccccccccccCCCEEEEeCChhhc
Confidence 5899999999998632 1356889999999874
No 51
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=98.43 E-value=2.9e-05 Score=66.20 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=45.7
Q ss_pred HHHHHhhccCc--cEEEeCCCCCcceEEEc-----------CeEEEccCCccCCCCCC----------------CCCCCC
Q 029629 99 SLAMLQRQLDV--DILVTGHTHQFKAYKHE-----------GGVVINPGSATGAYSSF----------------TFDVNP 149 (190)
Q Consensus 99 ~~~~~~~~~~~--~~vi~GHtH~~~~~~~~-----------~~~~inpGs~~~~~~~~----------------~~~~~~ 149 (190)
++..++++.++ .++++||.|........ +..+++++..+....+. --....
T Consensus 361 ~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~ 440 (527)
T 2yeq_A 361 RVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYR 440 (527)
T ss_dssp HHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCE
T ss_pred HHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCC
Confidence 35556666776 49999999997764421 34555443332211000 001356
Q ss_pred eEEEEEEeCCEEEEEEEEeeC
Q 029629 150 SFVLMDIDGLRVVVYVYELID 170 (190)
Q Consensus 150 ~~~ll~i~~~~~~~~~~~l~~ 170 (190)
+|++++++.+.+.++++.+.+
T Consensus 441 Gy~~v~vt~~~~~~~~~~v~~ 461 (527)
T 2yeq_A 441 GYVRCTVTPHQWKADYRVMPF 461 (527)
T ss_dssp EEEEEEEETTEEEEEEEEESC
T ss_pred CEEEEEEeccEEEEEEEEeCC
Confidence 899999999999999998854
No 52
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=98.43 E-value=8.6e-06 Score=69.40 Aligned_cols=65 Identities=14% Similarity=0.165 Sum_probs=40.6
Q ss_pred eEEEEEeecCCCCCCCC--------------hHHHHHhhh---CCCCc-cEEEEcCCCCC----------HHHHHHHhhh
Q 029629 2 VLVLAIGDLHIPHRASD--------------LPQKFKSML---VPGKI-QHIICTGNLSI----------KEVHDYLKSL 53 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~--------------~~~~l~~~~---~~~~~-D~vi~~GDl~~----------~~~~~~l~~l 53 (190)
.+|++++|+|+...... -..++...+ +++.+ -+++.+||++. ....+.|+.+
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~l 83 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL 83 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHT
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhcc
Confidence 47999999997432100 022222222 22334 46778999997 2456677777
Q ss_pred CCcEEEeccCCCCC
Q 029629 54 CPDLHVTRGEYDED 67 (190)
Q Consensus 54 ~~~~~~v~GNHD~~ 67 (190)
+ .=.++.||||..
T Consensus 84 g-yDa~~lGNHEFd 96 (530)
T 4h1s_A 84 R-YDAMALGNHEFD 96 (530)
T ss_dssp T-CCEEECCGGGGT
T ss_pred C-CCEEEEchhhhc
Confidence 5 357899999975
No 53
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.28 E-value=1.7e-06 Score=67.85 Aligned_cols=130 Identities=14% Similarity=0.130 Sum_probs=76.3
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC------HHHHHHHhhhCCcEEEeccCCCCCCC------
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI------KEVHDYLKSLCPDLHVTRGEYDEDSR------ 69 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~------~~~~~~l~~l~~~~~~v~GNHD~~~~------ 69 (190)
|||+++||+|+..+...+...+.++.++.++|+++..||-+. ....+.|.+++.. .+..|||++.-.
T Consensus 5 m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~D-a~TlGNHefD~g~~~~~~ 83 (281)
T 1t71_A 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-YITMGNHTWFQKLDLAVV 83 (281)
T ss_dssp CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTCCGGGHHHH
T ss_pred EEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCC-EEEEccCcccCCccHHHH
Confidence 799999999974221111222333222335799999888764 4678888888753 556699987532
Q ss_pred -----------CC----------cceEEEeCCEEEEEee--CCc-cCC--CCCH-------------------------H
Q 029629 70 -----------YP----------ETKTLTIGQFKLGICH--GHQ-VIP--WGDL-------------------------D 98 (190)
Q Consensus 70 -----------~p----------~~~~~~~~~~~i~~~H--g~~-~~~--~~~~-------------------------~ 98 (190)
+| ...+++.+|.+|.++- |.. +.+ ..++ .
T Consensus 84 l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~~~~~diIIv~~H~g~t~ 163 (281)
T 1t71_A 84 INKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILKRDCDLHIVDFHAETTS 163 (281)
T ss_dssp TTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTTCCCSEEEEEEECSCHH
T ss_pred hhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHhhcCCCEEEEEeCCCchH
Confidence 11 1245677888876553 432 211 1111 0
Q ss_pred HHHHHhh--ccCccEEEeCCCCCcceEE-E--cCeEEEc
Q 029629 99 SLAMLQR--QLDVDILVTGHTHQFKAYK-H--EGGVVIN 132 (190)
Q Consensus 99 ~~~~~~~--~~~~~~vi~GHtH~~~~~~-~--~~~~~in 132 (190)
+-..++. ..++|+++.||||.+.... . +|+.++.
T Consensus 164 Ek~~la~~~dg~VD~VvGgHTHv~t~d~~il~~gt~~i~ 202 (281)
T 1t71_A 164 EKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYIT 202 (281)
T ss_dssp HHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEES
T ss_pred HHHHHHHhCCCCeEEEEeCCCCcCCCceEEecCCcEEEe
Confidence 1111222 2359999999999976532 2 6777765
No 54
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.28 E-value=2.5e-05 Score=67.00 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCCC--------Ch--HHHHHhhhC----CCCcc-EEEEcCCCCCH------------HHHHHHhhhC
Q 029629 2 VLVLAIGDLHIPHRAS--------DL--PQKFKSMLV----PGKIQ-HIICTGNLSIK------------EVHDYLKSLC 54 (190)
Q Consensus 2 mri~~iSD~H~~~~~~--------~~--~~~l~~~~~----~~~~D-~vi~~GDl~~~------------~~~~~l~~l~ 54 (190)
++|++++|+|+..... .+ ..++...++ +.+++ +++.+||+++. ...+.|+.++
T Consensus 16 l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~lg 95 (557)
T 3c9f_A 16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD 95 (557)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC
T ss_pred EEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhcC
Confidence 7899999999853211 01 233333332 25677 47999999972 3456677766
Q ss_pred CcEEEeccCCCCC
Q 029629 55 PDLHVTRGEYDED 67 (190)
Q Consensus 55 ~~~~~v~GNHD~~ 67 (190)
. -+++.||||..
T Consensus 96 ~-Da~tlGNHEfD 107 (557)
T 3c9f_A 96 Y-DLLTIGNHELY 107 (557)
T ss_dssp C-SEECCCGGGSS
T ss_pred C-CEEeecchhcc
Confidence 4 46788999975
No 55
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.00091 Score=55.72 Aligned_cols=47 Identities=26% Similarity=0.239 Sum_probs=36.8
Q ss_pred CccEEEeCCCCCcceEEEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCC
Q 029629 108 DVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGL 159 (190)
Q Consensus 108 ~~~~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~ 159 (190)
-+|+++..-.-.++....+++.+||||.+... ..+.++||.+.+..-
T Consensus 382 ~PDilI~PS~l~~F~kvv~~~v~INPG~l~k~-----~~g~GTya~l~i~~~ 428 (460)
T 3flo_A 382 SPDIMIIPSELQHFARVVQNVVVINPGRFIRA-----TGNRGSYAQITVQCP 428 (460)
T ss_dssp CCSEEECCCSSCCEEEEETTEEEEECCCSBCT-----TSCBCEEEEEEECCC
T ss_pred CCCEEEcCCCCcCceEEeCCEEEECcccccCC-----CCCCceeEEEEEeCC
Confidence 47777777777778888899999999999742 223589999999754
No 56
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.72 E-value=0.00029 Score=54.46 Aligned_cols=63 Identities=17% Similarity=0.126 Sum_probs=40.3
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCC------HHHHHHHhhhCCcEEEeccCCCCC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSI------KEVHDYLKSLCPDLHVTRGEYDED 67 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~------~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
|||++++|+=+..+...+...+.++ +++. |+++..|+-.. ....+.|.+++.. .+..|||++.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~l-r~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~D-a~TlGNHefD 69 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTI-RPQF-DFVIVNMENSAGGFGMHRDAARGALEAGAG-CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHH-GGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTCS-EEECCTTTTS
T ss_pred CEEEEEeccCChHHHHHHHHHHHHH-HhhC-CEEEECCCCccCCcCCCHHHHHHHHhCCCC-EEEecccccc
Confidence 8999999997533222222333333 3334 88887776653 4678888888754 4455999865
No 57
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.67 E-value=0.00058 Score=52.60 Aligned_cols=128 Identities=21% Similarity=0.246 Sum_probs=74.2
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcC-CCCC-----HHHHHHHhhhCCcEEEeccCCCCCC-------
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTG-NLSI-----KEVHDYLKSLCPDLHVTRGEYDEDS------- 68 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~G-Dl~~-----~~~~~~l~~l~~~~~~v~GNHD~~~------- 68 (190)
|||++++|+=+..+...+...+.++. ++. |++++.| |.+. ....+.|.+++..+ +..|||++..
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr-~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~-~T~GNHefD~~~l~~~l 77 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DRY-DLVIANGENAARGKGLDRRSYRLLREAGVDL-VSLGNHAWDHKEVYALL 77 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTCCE-EECCTTTTSCTTHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHH-hhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCCCE-EEeccEeeECchHHHHh
Confidence 89999999976433223333444433 334 7766654 5443 57788898887655 4669998653
Q ss_pred ---------CCC------cceEEEeCCEEEEEee--CCccC-CCCCH-------------------------HHHHHHhh
Q 029629 69 ---------RYP------ETKTLTIGQFKLGICH--GHQVI-PWGDL-------------------------DSLAMLQR 105 (190)
Q Consensus 69 ---------~~p------~~~~~~~~~~~i~~~H--g~~~~-~~~~~-------------------------~~~~~~~~ 105 (190)
.+| ...+++.+|.+|.++- |.... +..++ .+-..++.
T Consensus 78 ~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk~d~IIv~~H~g~tsek~~la~ 157 (252)
T 2z06_A 78 ESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEKADYVLVEVHAEATSEKMALAH 157 (252)
T ss_dssp HHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCCCSEEEEEEECSCHHHHHHHHH
T ss_pred ccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhCCCEEEEEeCCCcHHHHHHHHH
Confidence 122 2356777888876654 33222 11111 01111221
Q ss_pred --ccCccEEEeCCCCCcceE--EE-cCeEEEc
Q 029629 106 --QLDVDILVTGHTHQFKAY--KH-EGGVVIN 132 (190)
Q Consensus 106 --~~~~~~vi~GHtH~~~~~--~~-~~~~~in 132 (190)
..++|+++.||||.+... .. +|+.++.
T Consensus 158 ~~dg~Vd~VvGgHTHv~t~d~~il~~gt~~it 189 (252)
T 2z06_A 158 YLDGRASAVLGTHTHVPTLDATRLPKGTLYQT 189 (252)
T ss_dssp HHBTTBSEEEEESSCSCBSCCEECTTSCEEES
T ss_pred hCCCCeEEEEcCCCCcCCCccEEcCCCcEeec
Confidence 235999999999997652 22 5656654
No 58
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=90.49 E-value=0.29 Score=32.49 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=43.4
Q ss_pred eEEEEEeecCC-------------CCCCCChHHHHHhhhCCCCccEEEEcCCCCC--HHHHHHHh-hhCCc-EEEeccCC
Q 029629 2 VLVLAIGDLHI-------------PHRASDLPQKFKSMLVPGKIQHIICTGNLSI--KEVHDYLK-SLCPD-LHVTRGEY 64 (190)
Q Consensus 2 mri~~iSD~H~-------------~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~-~l~~~-~~~v~GNH 64 (190)
||+++++|--. -...++..+.|.++.++.++..|+++=++.+ ++.++.++ +...| ++-+|+++
T Consensus 4 mkiaVIgD~dtv~GFrLaGi~~~~v~~~ee~~~~~~~l~~~~digIIlIte~~a~~i~~~i~~~~~~~~~P~Il~IPs~~ 83 (109)
T 2d00_A 4 VRMAVIADPETAQGFRLAGLEGYGASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLMRGRDLPVLLPIAGLK 83 (109)
T ss_dssp CCEEEEECHHHHHHHHHTTSEEEECSSHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHHHHHHTTCCCCCEEEEESCGG
T ss_pred cEEEEEeCHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHhhCCCeEEEEEeHHHHHhhHHHHHHHHhCCCCeEEEEECCCc
Confidence 89999999421 0011234566777776778999999999998 45666664 33345 56689888
Q ss_pred C
Q 029629 65 D 65 (190)
Q Consensus 65 D 65 (190)
+
T Consensus 84 ~ 84 (109)
T 2d00_A 84 E 84 (109)
T ss_dssp G
T ss_pred c
Confidence 4
No 59
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=90.49 E-value=0.15 Score=34.22 Aligned_cols=66 Identities=11% Similarity=0.051 Sum_probs=43.5
Q ss_pred CeEEEEEeecCCC-------------CCCCChHHHHHhhhCCCCccEEEEcCCCCC--HHHHHHHhhhCCc-EEEeccCC
Q 029629 1 MVLVLAIGDLHIP-------------HRASDLPQKFKSMLVPGKIQHIICTGNLSI--KEVHDYLKSLCPD-LHVTRGEY 64 (190)
Q Consensus 1 Mmri~~iSD~H~~-------------~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~~l~~~-~~~v~GNH 64 (190)
+||+++++|--.- ...++..+.|.++.++ ++..|+++=++.+ ++.++.+++...| ++.+|+++
T Consensus 2 ~mKiaVIGD~Dtv~GFrLaGie~~~v~~~ee~~~~~~~l~~~-digIIlIte~ia~~i~~~i~~~~~~~~P~IveIPs~~ 80 (115)
T 3aon_B 2 TYKIGVVGDKDSVSPFRLFGFDVQHGTTKTEIRKTIDEMAKN-EYGVIYITEQCANLVPETIERYKGQLTPAIILIPSHQ 80 (115)
T ss_dssp EEEEEEESCHHHHGGGGGGTCEEECCCSHHHHHHHHHHHHHT-TEEEEEEEHHHHTTCHHHHHHHHTSSSCEEEEECBTT
T ss_pred ceEEEEEECHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhc-CceEEEEeHHHHHHhHHHHHHHhCCCCCEEEEECCCC
Confidence 1899999994320 0112345567776666 8999999998887 4566666654345 56688887
Q ss_pred CCC
Q 029629 65 DED 67 (190)
Q Consensus 65 D~~ 67 (190)
-..
T Consensus 81 g~~ 83 (115)
T 3aon_B 81 GTL 83 (115)
T ss_dssp BCC
T ss_pred CCC
Confidence 543
No 60
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=83.33 E-value=0.48 Score=30.91 Aligned_cols=63 Identities=16% Similarity=0.149 Sum_probs=42.7
Q ss_pred eEEEEEeecCC--------------CCCCCChHHHHHhhhCCCCccEEEEcCCCCC--HHHH-HHHh-hhCCcEEEeccC
Q 029629 2 VLVLAIGDLHI--------------PHRASDLPQKFKSMLVPGKIQHIICTGNLSI--KEVH-DYLK-SLCPDLHVTRGE 63 (190)
Q Consensus 2 mri~~iSD~H~--------------~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~-~~l~-~l~~~~~~v~GN 63 (190)
|||++++|--. -...++..+.|.++.++.++..|+++=++.+ ++.+ +... +..+-++.+|++
T Consensus 1 MkiaVIGD~dtv~GFrLaGi~~v~~v~~~ee~~~~~~~l~~~~digIIlite~~a~~i~~~i~~~~~~~~~P~Iv~IP~~ 80 (101)
T 2ov6_A 1 MELAVIGKSEFVTGFRLAGISKVYETPDIPATESAVRSVLEDKSVGILVMHNDDIGNLPEVLRKNLNESVQPTVVALGGS 80 (101)
T ss_dssp CCEEEEECHHHHHHHHHHTCCEEEECCSTTTHHHHHHHHHHHTSSSEEEEEHHHHTTCTTTTHHHHHHHCCSCEEEECTT
T ss_pred CEEEEEECHHHHHHHHHcCCCceEecCCHHHHHHHHHHHhhCCCeEEEEEcHHHHHHhHHHHHHHHhCCCCcEEEEECCC
Confidence 78888888321 1123456778888777778999999988877 2333 5554 333446779999
Q ss_pred C
Q 029629 64 Y 64 (190)
Q Consensus 64 H 64 (190)
+
T Consensus 81 ~ 81 (101)
T 2ov6_A 81 G 81 (101)
T ss_dssp S
T ss_pred C
Confidence 8
No 61
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=78.52 E-value=2.3 Score=33.24 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=48.4
Q ss_pred ccEEEEcCCCCC-HHHHHHHhhhCCcEEEeccCCCCCCCCCcceEEEeCCEEEEEeeCCccCCC------------CC--
Q 029629 32 IQHIICTGNLSI-KEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPW------------GD-- 96 (190)
Q Consensus 32 ~D~vi~~GDl~~-~~~~~~l~~l~~~~~~v~GNHD~~~~~p~~~~~~~~~~~i~~~Hg~~~~~~------------~~-- 96 (190)
..-|+..|+|+. +.+.+.|++.+ +.+|.. | .+|. +..-|+=.||-+.... .+
T Consensus 31 ~~~iy~~g~IVHN~~Vv~~L~~~G--v~~v~~--~---ev~~------g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP 97 (297)
T 3dnf_A 31 QGKVYTLGPIIHNPQEVNRLKNLG--VFPSQG--E---EFKE------GDTVIIRSHGIPPEKEEALRKKGLKVIDATCP 97 (297)
T ss_dssp CSCEEESSCSSSCHHHHHHHHHHT--EEECCS--S---CCCT------TCEEEECTTCCCHHHHHHHHHTTCEEEECCCH
T ss_pred CCCEEEeCCcccCHHHHHHHHhCC--CEEech--h---hCCC------CCEEEEECCCCCHHHHHHHHHCCCEEEeCCCc
Confidence 356999999987 78899999876 677754 3 3342 2344555677543110 00
Q ss_pred -HHHHH---HHhhccCccEEEeCCCCCcce
Q 029629 97 -LDSLA---MLQRQLDVDILVTGHTHQFKA 122 (190)
Q Consensus 97 -~~~~~---~~~~~~~~~~vi~GHtH~~~~ 122 (190)
..... ....+.++.+++.||.-.|.+
T Consensus 98 ~V~Kvh~~v~~~~~~Gy~iiiiG~~~HpEV 127 (297)
T 3dnf_A 98 YVKAVHEAVCQLTREGYFVVLVGEKNHPEV 127 (297)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESCTTCHHH
T ss_pred chHHHHHHHHHHHhCCCEEEEEecCCCceE
Confidence 11111 222356899999999888765
No 62
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=62.01 E-value=4.8 Score=33.02 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=17.8
Q ss_pred CCCCCcceEEEcC-eEEEccCCccCCCCCCCCCCCCeEEEEEEeCCE
Q 029629 115 GHTHQFKAYKHEG-GVVINPGSATGAYSSFTFDVNPSFVLMDIDGLR 160 (190)
Q Consensus 115 GHtH~~~~~~~~~-~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~~ 160 (190)
+|+|.-...+.+. +++|||||.+. .|++++.+++.
T Consensus 7 ~~~~gm~~~Ms~klILviN~GSSS~-----------K~~lf~~~~~~ 42 (415)
T 3sk3_A 7 HHHHGMASHMSSKLVLVLNCGSSSL-----------KFAIIDAVNGD 42 (415)
T ss_dssp -----------CCEEEEEEECSSCE-----------EEEEEETTTCC
T ss_pred cccccccccCCCCeEEEEeCchHhh-----------hheeEECCCCC
Confidence 4444333333444 78999999984 47888765544
No 63
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=57.36 E-value=15 Score=27.22 Aligned_cols=34 Identities=12% Similarity=0.016 Sum_probs=27.5
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
..+||+||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (256)
T 2r7a_A 57 SLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPR 90 (256)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecC
Confidence 4789999987654567888999999888988864
No 64
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=55.17 E-value=17 Score=26.87 Aligned_cols=34 Identities=12% Similarity=-0.004 Sum_probs=27.5
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
..+||+||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (255)
T 3md9_A 57 AMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPG 90 (255)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCC
Confidence 4789999987765556788999999889998863
No 65
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=54.82 E-value=6.6 Score=27.41 Aligned_cols=34 Identities=21% Similarity=0.085 Sum_probs=22.3
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTG 39 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~G 39 (190)
||||++.||--+ .++.+.+.+.+++.+.+ |+-.|
T Consensus 1 ~MkIaigsDhaG----~~lK~~i~~~L~~~G~e-V~D~G 34 (149)
T 2vvr_A 1 MKKIAFGCDHVG----FILKHEIVAHLVERGVE-VIDKG 34 (149)
T ss_dssp CCEEEEEECTTG----GGGHHHHHHHHHHTTCE-EEECC
T ss_pred CcEEEEEeCchh----HHHHHHHHHHHHHCCCE-EEEeC
Confidence 899999999543 24667777777555553 34444
No 66
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=54.31 E-value=8.6 Score=30.90 Aligned_cols=43 Identities=12% Similarity=-0.007 Sum_probs=28.7
Q ss_pred HHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccC
Q 029629 21 QKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
..+.+++++.+||.|+..||....-........+.|++.+.++
T Consensus 84 ~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag 126 (385)
T 4hwg_A 84 EKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG 126 (385)
T ss_dssp HHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC
Confidence 3455666778999999999986632222334456788777654
No 67
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=53.52 E-value=21 Score=26.25 Aligned_cols=33 Identities=18% Similarity=-0.004 Sum_probs=25.7
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
.+||+||....-...+.++.|++++.|++.+..
T Consensus 56 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 56 LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 689999986444457788999999888887753
No 68
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=50.99 E-value=21 Score=26.87 Aligned_cols=34 Identities=12% Similarity=0.036 Sum_probs=27.2
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
..+||+||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (283)
T 2r79_A 57 ALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSA 90 (283)
T ss_dssp TTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCC
T ss_pred hcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecC
Confidence 4789999987655557788999999888888754
No 69
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=44.82 E-value=51 Score=21.26 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=27.5
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEeccCC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKEVHDYLKSL----CPDLHVTRGEY 64 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v~GNH 64 (190)
...+.+++.+.-+||++.|. ..+....+..+ ..|++.+.++-
T Consensus 28 ~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~~~sk 73 (110)
T 3cpq_A 28 RTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQHKITS 73 (110)
T ss_dssp HHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEECCSCH
T ss_pred HHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEEcCCH
Confidence 34445566789999999999 65544444432 46888774443
No 70
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=43.60 E-value=37 Score=26.05 Aligned_cols=34 Identities=9% Similarity=-0.052 Sum_probs=27.6
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCC
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEY 64 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNH 64 (190)
.+||+||..+. ...+.++.|++++.|++.+..+.
T Consensus 83 l~PDlIi~~~~-~~~~~~~~L~~~Gipvv~~~~~~ 116 (326)
T 3psh_A 83 LKPDVVFVTNY-APSEMIKQISDVNIPVVAISLRT 116 (326)
T ss_dssp TCCSEEEEETT-CCHHHHHHHHTTTCCEEEECSCC
T ss_pred cCCCEEEEeCC-CChHHHHHHHHcCCCEEEEeccc
Confidence 68999998753 45778899999988999987654
No 71
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=40.87 E-value=54 Score=19.87 Aligned_cols=43 Identities=5% Similarity=0.060 Sum_probs=29.9
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHHHHHHHh----hhCCcEEEeccCCC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKEVHDYLK----SLCPDLHVTRGEYD 65 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~----~l~~~~~~v~GNHD 65 (190)
...+.+++.+...|+++.|.-. +....+. ..+.|++.+.++-+
T Consensus 18 ~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~sk~e 64 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVESMKK 64 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEESCHHH
T ss_pred HHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEECCHHH
Confidence 4455567788999999999876 3444333 34578999886644
No 72
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=40.85 E-value=51 Score=21.59 Aligned_cols=46 Identities=11% Similarity=0.211 Sum_probs=33.1
Q ss_pred HHHHhhhCCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEeccCCCC
Q 029629 21 QKFKSMLVPGKIQHIICTGNLSIKEVHDYL----KSLCPDLHVTRGEYDE 66 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD~ 66 (190)
....+.+++.+.-+||++.|.-..+....| ++.+.|++++.+.-+.
T Consensus 31 ~~v~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~L 80 (113)
T 3jyw_G 31 NHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARL 80 (113)
T ss_dssp HHHHHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTTT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 445566777889999999999775543333 3445799999987664
No 73
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=40.78 E-value=57 Score=20.57 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=26.2
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEeccC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKEVHDYLKSL----CPDLHVTRGE 63 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v~GN 63 (190)
...+.+++.+...||++.| ...+....+..+ +.|++.+.++
T Consensus 23 ~v~kai~~gka~lViiA~D-~~~~~~~~l~~~c~~~~vp~~~~~~s 67 (101)
T 1w41_A 23 KSIQYAKMGGAKLIIVARN-ARPDIKEDIEYYARLSGIPVYEFEGT 67 (101)
T ss_dssp HHHHHHHHTCCSEEEEETT-SCHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHHcCCCcEEEEeCC-CCHHHHHHHHHHHHhcCCCEEEecCC
Confidence 3444455678999999999 665555444433 4687775333
No 74
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=40.38 E-value=12 Score=30.66 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=18.1
Q ss_pred EEcCeEEEccCCccCCCCCCCCCCCCeEEEEEEeCC
Q 029629 124 KHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDGL 159 (190)
Q Consensus 124 ~~~~~~~inpGs~~~~~~~~~~~~~~~~~ll~i~~~ 159 (190)
+...+++|||||.+. .|++++.+++
T Consensus 16 ~~~~ILviN~GSSS~-----------K~~lf~~~~~ 40 (415)
T 2e1z_A 16 EFPVVLVINCGSSSI-----------KFSVLDVATC 40 (415)
T ss_dssp -CCEEEEEEECSSEE-----------EEEEEETTTC
T ss_pred CCCeEEEEECCchhh-----------eEEEEECCCC
Confidence 345689999999984 5788876443
No 75
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=39.26 E-value=14 Score=23.81 Aligned_cols=49 Identities=8% Similarity=0.009 Sum_probs=30.6
Q ss_pred ChHHHHHhhhCCCCccEEEEcCCCCC--HHHHHHHhhh-CCc-EEEeccCCCC
Q 029629 18 DLPQKFKSMLVPGKIQHIICTGNLSI--KEVHDYLKSL-CPD-LHVTRGEYDE 66 (190)
Q Consensus 18 ~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~~l-~~~-~~~v~GNHD~ 66 (190)
++.+.|.+++++.++..|+++-++.+ ++.++...+- ..| ++.+|+++-.
T Consensus 40 e~~~~~~~l~~~~digIIlIte~ia~~i~~~i~~~~~~~~~P~IieIPs~~g~ 92 (102)
T 2i4r_A 40 EIVKAVEDVLKRDDVGVVIMKQEYLKKLPPVLRREIDEKVEPTFVSVGGTGGV 92 (102)
T ss_dssp HHHHHHHHHHHCSSEEEEEEEGGGSTTSCHHHHTTTTTCCSSEEEEEC-----
T ss_pred HHHHHHHHHhhCCCeEEEEEeHHHHHHHHHHHHHHHhCCCccEEEEECCCCCC
Confidence 34567777777778999999999998 3555554442 234 5678887643
No 76
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=39.04 E-value=46 Score=18.83 Aligned_cols=56 Identities=7% Similarity=-0.160 Sum_probs=26.1
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEe
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVT 60 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v 60 (190)
||++-+.++. .. .-..+...+.++.++.+.+..+..=| +.+..+.+.-.+.|.+++
T Consensus 1 m~~v~f~a~w-C~-~C~~~~~~l~~~~~~~~~~~~~~~v~--~~~~~~~~~v~~~Pt~~~ 56 (77)
T 1ilo_A 1 MMKIQIYGTG-CA-NCQMLEKNAREAVKELGIDAEFEKIK--EMDQILEAGLTALPGLAV 56 (77)
T ss_dssp CEEEEEECSS-SS-TTHHHHHHHHHHHHHTTCCEEEEEEC--SHHHHHHHTCSSSSCEEE
T ss_pred CcEEEEEcCC-Ch-hHHHHHHHHHHHHHHcCCceEEEEec--CHHHHHHCCCCcCCEEEE
Confidence 8999898873 22 12233334444433222233333323 554444443333465555
No 77
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=38.69 E-value=44 Score=25.37 Aligned_cols=29 Identities=7% Similarity=-0.137 Sum_probs=21.4
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEE
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLH 58 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~ 58 (190)
..||+++++.=.-+..++..-.+++.|++
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvI 185 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVI 185 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCE
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEE
Confidence 57999999876666666777777776764
No 78
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=37.53 E-value=39 Score=21.62 Aligned_cols=36 Identities=6% Similarity=-0.018 Sum_probs=19.7
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhh--CCcEEEeccCCC
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSL--CPDLHVTRGEYD 65 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l--~~~~~~v~GNHD 65 (190)
...+|.|+ ..|.-..++++.+++. ..|++++-+..+
T Consensus 60 ~~~~dlvi-~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 97 (137)
T 2pln_A 60 IRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPT 97 (137)
T ss_dssp HSCCSEEE-ECSTTHHHHHHHHHHHSTTSEEEEEESSCC
T ss_pred cCCCCEEE-EcCccHHHHHHHHHhcCCCccEEEEeCCCC
Confidence 34577777 5554444555555554 345666655544
No 79
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=37.44 E-value=59 Score=24.27 Aligned_cols=30 Identities=7% Similarity=-0.202 Sum_probs=21.3
Q ss_pred CccEEEEcCCCCCHHHHHHHhhhCCcEEEe
Q 029629 31 KIQHIICTGNLSIKEVHDYLKSLCPDLHVT 60 (190)
Q Consensus 31 ~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v 60 (190)
.||+++++.=.-+..++..-.+++.|++++
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIai 186 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICL 186 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEE
Confidence 599999986545556667777777777553
No 80
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=37.39 E-value=52 Score=21.94 Aligned_cols=44 Identities=2% Similarity=-0.158 Sum_probs=29.3
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHH---Hh-hhCCcEEEeccCCCC
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDY---LK-SLCPDLHVTRGEYDE 66 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~---l~-~l~~~~~~v~GNHD~ 66 (190)
..+.+++.+.-+||++.|.-..+.... +- ..+.|++.+.++-+.
T Consensus 32 v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~L 79 (126)
T 2xzm_U 32 VLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASL 79 (126)
T ss_dssp HHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHH
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHH
Confidence 344455678999999999865333333 32 235799999877764
No 81
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.10 E-value=63 Score=20.29 Aligned_cols=44 Identities=20% Similarity=0.111 Sum_probs=28.1
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHHHHHHHh----hhCCcEEEeccCCCC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKEVHDYLK----SLCPDLHVTRGEYDE 66 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~----~l~~~~~~v~GNHD~ 66 (190)
...+.+++.+.-+||++.| ...+....+. ....|++...++-+.
T Consensus 22 ~v~kai~~gka~lViiA~D-~~~~~~~~i~~~c~~~~ip~~~~~~s~~e 69 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKN-APKEIKDDIYYYAKLSDIPVYEFEGTSVE 69 (99)
T ss_dssp HHHHHHHHTCCSEEEEECC-CCHHHHHHHHHHHHHTTCCEEEECCCSCG
T ss_pred HHHHHHHcCCccEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEeCCCHHH
Confidence 3444555678999999999 5655444443 234788776555443
No 82
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=36.04 E-value=70 Score=24.25 Aligned_cols=46 Identities=7% Similarity=0.142 Sum_probs=33.4
Q ss_pred HHHHhhhCCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEeccCCCC
Q 029629 21 QKFKSMLVPGKIQHIICTGNLSIKEVHDYL----KSLCPDLHVTRGEYDE 66 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD~ 66 (190)
..+.+.+++.+.-+||+++|....+....| ++.+.|+++|.|.-+.
T Consensus 130 neVtKaIekgKAqLVVIA~DvdPielv~~LPaLCee~~VPY~~V~sK~~L 179 (255)
T 4a17_F 130 NHITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKGKAAL 179 (255)
T ss_dssp HHHHHHHHTSCCSEEEEESCCSSTHHHHHHHHHHHHTTCCEEEESCHHHH
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 344555667889999999999876555444 3456899999987775
No 83
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=33.74 E-value=25 Score=28.08 Aligned_cols=41 Identities=5% Similarity=-0.010 Sum_probs=26.5
Q ss_pred HHHhhhCCCCccEEEEcCCCCCH-HHHHHHhhhCCcEEEecc
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIK-EVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~-~~~~~l~~l~~~~~~v~G 62 (190)
.+.+++++.+||.|+..||.... ......+..+.|++.+.+
T Consensus 102 ~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a 143 (396)
T 3dzc_A 102 GMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA 143 (396)
T ss_dssp HHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC
T ss_pred HHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC
Confidence 45555667899999999997652 222233445678776644
No 84
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=33.45 E-value=40 Score=26.09 Aligned_cols=31 Identities=19% Similarity=0.155 Sum_probs=25.0
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTR 61 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
..+||+||..+. ..+.++.|++++.|++.+.
T Consensus 114 al~PDLIi~~~~--~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 114 AATPDVVFLPMK--LKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp HTCCSEEEEEGG--GHHHHHHHHHTTCCEEEEC
T ss_pred hcCCCEEEEeCc--chhHHHHHHHcCCCEEEEc
Confidence 368999998764 4678899999988898885
No 85
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=31.58 E-value=29 Score=27.82 Aligned_cols=41 Identities=5% Similarity=-0.063 Sum_probs=26.1
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHH-HHHHHhhhCCcEEEecc
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKE-VHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~-~~~~l~~l~~~~~~v~G 62 (190)
.+.+++++.+||.|+..||....- .....+..+.|++.+.+
T Consensus 105 ~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~a 146 (403)
T 3ot5_A 105 GINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEA 146 (403)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC
Confidence 455566678999999999965421 12223345578776654
No 86
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.15 E-value=89 Score=22.76 Aligned_cols=29 Identities=7% Similarity=-0.117 Sum_probs=19.6
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEE
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLH 58 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~ 58 (190)
..||+++++.=..+...+..-++++.|++
T Consensus 110 ~~Pdllvv~Dp~~d~~ai~EA~~l~IP~I 138 (202)
T 3j20_B 110 FEPDVLIVTDPRADHQAMREAVEIGIPIV 138 (202)
T ss_dssp CCCSEEEESCTTTSHHHHHHHHHHTCCEE
T ss_pred cCCCeEEEeCCccchHHHHHHHHcCCCEE
Confidence 36899999854445556666667776654
No 87
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=30.87 E-value=15 Score=25.46 Aligned_cols=29 Identities=14% Similarity=-0.028 Sum_probs=18.3
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCcc
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQ 33 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D 33 (190)
||||++-||--+ .++.+.+.+.+++.+.+
T Consensus 7 ~mkI~igsDhaG----~~lK~~i~~~L~~~G~e 35 (148)
T 4em8_A 7 VKRVFLSSDHAG----VELRLFLSAYLRDLGCE 35 (148)
T ss_dssp CSEEEEEECGGG----HHHHHHHHHHHHHTTCE
T ss_pred eeEEEEEECchh----HHHHHHHHHHHHHCCCE
Confidence 588999998653 24556666666544443
No 88
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=30.60 E-value=55 Score=21.54 Aligned_cols=44 Identities=11% Similarity=0.105 Sum_probs=29.7
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEeccCCCC
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDYL----KSLCPDLHVTRGEYDE 66 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD~ 66 (190)
..+.+++.+.-+||++.|.-..+....+ +..+.|++++.++-+.
T Consensus 28 v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eL 75 (121)
T 2lbw_A 28 VVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDL 75 (121)
T ss_dssp HHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHH
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHH
Confidence 3444556789999999998874433333 3345789888877654
No 89
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=30.30 E-value=93 Score=24.14 Aligned_cols=29 Identities=3% Similarity=-0.154 Sum_probs=20.9
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEE
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLH 58 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~ 58 (190)
..||+||++.=..+...+..-++++.|++
T Consensus 117 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvI 145 (295)
T 2zkq_b 117 REPRLLVVTDPRADHQPLTEASYVNLPTI 145 (295)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHHTCCEE
T ss_pred cCCCeEEEeCCCcchhHHHHHHHhCCCEE
Confidence 46999998865556666777777777764
No 90
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=30.02 E-value=96 Score=23.47 Aligned_cols=30 Identities=3% Similarity=-0.148 Sum_probs=20.7
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEE
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHV 59 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~ 59 (190)
..||+++++.=..+...+..-++++.|+++
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIa 179 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIA 179 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEE
Confidence 469999988544455666777777777643
No 91
>2kqs_B Death domain-associated protein 6; SUMO, SIM, DAXX, nucleus, phosphoprotein, UBL conjugation PA apoptosis, transcription, transcription regulation; NMR {Homo sapiens}
Probab=29.96 E-value=21 Score=16.87 Aligned_cols=10 Identities=10% Similarity=0.275 Sum_probs=8.7
Q ss_pred EEEEEeecCC
Q 029629 3 LVLAIGDLHI 12 (190)
Q Consensus 3 ri~~iSD~H~ 12 (190)
++.++||+|.
T Consensus 14 evivlsds~~ 23 (26)
T 2kqs_B 14 EIIVLSDSDX 23 (26)
T ss_pred eEEEcccccc
Confidence 6889999996
No 92
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=29.67 E-value=87 Score=23.23 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=28.5
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccC
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
+.+.+...++|.||+++--.+.+.++.+.+.+.|++++-..
T Consensus 60 ~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~~~iPvV~i~~~ 100 (295)
T 3hcw_A 60 VYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKP 100 (295)
T ss_dssp HHHHHHTTCCSEEEESCCCTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHhCCcCEEEEcCcccChHHHHHHHhCCCCEEEECCC
Confidence 33334457899999987544556777788777888877443
No 93
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=29.09 E-value=1.1e+02 Score=19.15 Aligned_cols=11 Identities=18% Similarity=0.163 Sum_probs=7.4
Q ss_pred CeEEEEEeecC
Q 029629 1 MVLVLAIGDLH 11 (190)
Q Consensus 1 Mmri~~iSD~H 11 (190)
||||+++.|--
T Consensus 1 ~~~ilivdd~~ 11 (134)
T 3f6c_A 1 SLNAIIIDDHP 11 (134)
T ss_dssp CEEEEEECCCH
T ss_pred CeEEEEEcCCH
Confidence 57777777654
No 94
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=28.86 E-value=88 Score=23.49 Aligned_cols=30 Identities=10% Similarity=-0.114 Sum_probs=20.7
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEE
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHV 59 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~ 59 (190)
..||+++++.=.-+...+..-++++.|++.
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIa 142 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIA 142 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEE
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEE
Confidence 469999998544455566777777777654
No 95
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=28.83 E-value=83 Score=23.09 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=28.7
Q ss_pred HhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCC
Q 029629 24 KSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEY 64 (190)
Q Consensus 24 ~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNH 64 (190)
.+.+...++|.||+.+--.+.+.++.+.+.+.|++++-..-
T Consensus 62 ~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~~~~ 102 (292)
T 3k4h_A 62 VKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKPY 102 (292)
T ss_dssp HHHHHTTCCCEEEESCCBTTCHHHHHHHHTTCCEEEESCCS
T ss_pred HHHHHcCCCCEEEEeCCCCChHHHHHHHHCCCCEEEECCCC
Confidence 33344578999999875445567788887788888875443
No 96
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=28.32 E-value=21 Score=28.36 Aligned_cols=12 Identities=17% Similarity=-0.081 Sum_probs=10.0
Q ss_pred CeEEEEEeecCC
Q 029629 1 MVLVLAIGDLHI 12 (190)
Q Consensus 1 Mmri~~iSD~H~ 12 (190)
||||+++++...
T Consensus 20 mmkIl~i~~~~~ 31 (438)
T 3c48_A 20 HMRVAMISMHTS 31 (438)
T ss_dssp CCEEEEECTTSC
T ss_pred hheeeeEEeecc
Confidence 899999997553
No 97
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=28.28 E-value=66 Score=23.78 Aligned_cols=40 Identities=8% Similarity=0.042 Sum_probs=27.1
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
+.+.+...++|.||+.+--.+.+.++.+.+.+.|++++-.
T Consensus 58 ~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 97 (288)
T 3gv0_A 58 IRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGR 97 (288)
T ss_dssp HHHHHHHTCCSEEEEESCCTTCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHcCCccEEEEecCCCCcHHHHHHhhCCCCEEEECC
Confidence 3343444689999998754445667778777788877643
No 98
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=28.17 E-value=1.4e+02 Score=22.22 Aligned_cols=46 Identities=7% Similarity=0.068 Sum_probs=32.2
Q ss_pred HHHHhhhCCCCccEEEEcCCC-CC----HHHHHHHhhhCCcEEEeccCCCCC
Q 029629 21 QKFKSMLVPGKIQHIICTGNL-SI----KEVHDYLKSLCPDLHVTRGEYDED 67 (190)
Q Consensus 21 ~~l~~~~~~~~~D~vi~~GDl-~~----~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
+.+.++. +.+.|.|++.|.. +. .++++.+++...|++.-+||.+.-
T Consensus 27 ~~l~~~~-~~GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil~p~~~~~~ 77 (235)
T 3w01_A 27 DDLDAIC-MSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIESV 77 (235)
T ss_dssp HHHHHHH-TSSCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEEECCCSTTC
T ss_pred HHHHHHH-HcCCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEEecCCHHHh
Confidence 4555543 5789999999976 33 245566666446999999998653
No 99
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=28.10 E-value=12 Score=26.45 Aligned_cols=34 Identities=21% Similarity=0.016 Sum_probs=21.9
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTG 39 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~G 39 (190)
||||++.||--+ .++.+.+.+.+++.+. -|+-.|
T Consensus 3 ~MkIaigsDhaG----~~lK~~i~~~L~~~G~-eV~D~G 36 (162)
T 2vvp_A 3 GMRVYLGADHAG----YELKQRIIEHLKQTGH-EPIDCG 36 (162)
T ss_dssp CCEEEEEECHHH----HHHHHHHHHHHHHTTC-EEEECS
T ss_pred CCEEEEEeCchh----HHHHHHHHHHHHHCCC-EEEEeC
Confidence 589999999653 2456667766655555 344445
No 100
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=28.07 E-value=1.2e+02 Score=22.24 Aligned_cols=31 Identities=3% Similarity=-0.102 Sum_probs=21.6
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEEe
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHVT 60 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v 60 (190)
..||+++++.=.-+...+..-++++.|++++
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIal 144 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVAL 144 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEE
Confidence 4699999985445556677777777777543
No 101
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=27.13 E-value=92 Score=23.17 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=29.2
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccCC
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEY 64 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GNH 64 (190)
+.+.+...++|.||+.+--.+.+.++.+.+.+.|++.+-..-
T Consensus 75 ~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~~ 116 (305)
T 3huu_A 75 VKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKSL 116 (305)
T ss_dssp HHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCCC
Confidence 333344578999999875445567788887778888775443
No 102
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=26.78 E-value=87 Score=24.70 Aligned_cols=33 Identities=12% Similarity=-0.135 Sum_probs=20.6
Q ss_pred CCccEEEEcC-CCCCHH-HHHHHhhhCCcEEEecc
Q 029629 30 GKIQHIICTG-NLSIKE-VHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 30 ~~~D~vi~~G-Dl~~~~-~~~~l~~l~~~~~~v~G 62 (190)
.+.|.++..+ +-++.+ +++.+.+....++...|
T Consensus 44 ~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~ 78 (343)
T 2yq5_A 44 EGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRI 78 (343)
T ss_dssp TTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESS
T ss_pred cCCcEEEEcCCCCcCHHHHHHhccccCceEEEECc
Confidence 3567777763 556677 88887653334555555
No 103
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.63 E-value=1.2e+02 Score=20.27 Aligned_cols=43 Identities=12% Similarity=0.016 Sum_probs=28.5
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHHHhh----hCCcEEEeccCCC
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDYLKS----LCPDLHVTRGEYD 65 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~----l~~~~~~v~GNHD 65 (190)
..+.+++.+.-+||++.|.-..+....+.. .+.|++++..+-+
T Consensus 49 v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~e 95 (135)
T 2aif_A 49 ATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVA 95 (135)
T ss_dssp HHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHH
T ss_pred HHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHH
Confidence 344455678999999999988654344333 2468888855544
No 104
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=26.55 E-value=1.5e+02 Score=21.95 Aligned_cols=38 Identities=3% Similarity=0.093 Sum_probs=26.5
Q ss_pred hhhCCCCccEEEEcCCCCCHH-HHHHHhhhCCcEEEeccC
Q 029629 25 SMLVPGKIQHIICTGNLSIKE-VHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 25 ~~~~~~~~D~vi~~GDl~~~~-~~~~l~~l~~~~~~v~GN 63 (190)
+.+...++|.||+.+--.+.+ .++.+.+ +.|++++-..
T Consensus 65 ~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~ 103 (303)
T 3kke_A 65 RLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSR 103 (303)
T ss_dssp HHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCC
T ss_pred HHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCc
Confidence 334457899999988544444 7777887 8888877443
No 105
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=25.28 E-value=1.5e+02 Score=22.56 Aligned_cols=32 Identities=9% Similarity=-0.013 Sum_probs=25.0
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEe
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVT 60 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v 60 (190)
..++|.||+.+--.+.+.++.+.+.+.|++++
T Consensus 122 ~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 122 SWRPSGVIIAGLEHSEAARAMLDAAGIPVVEI 153 (344)
T ss_dssp TTCCSEEEEECSCCCHHHHHHHHHCSSCEEEE
T ss_pred hCCCCEEEEECCCCCHHHHHHHHhCCCCEEEE
Confidence 56899999988555567777788777888887
No 106
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=25.08 E-value=81 Score=24.09 Aligned_cols=43 Identities=7% Similarity=0.076 Sum_probs=28.6
Q ss_pred HHHHhhhCC-CCccEEEEcCCCC-CHHHHHHHhhhCCcEEEeccC
Q 029629 21 QKFKSMLVP-GKIQHIICTGNLS-IKEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 21 ~~l~~~~~~-~~~D~vi~~GDl~-~~~~~~~l~~l~~~~~~v~GN 63 (190)
+.+.+++.+ .++|.||++++-. ..+.++.+.+.+.|++++-..
T Consensus 51 ~~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 51 QQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp HHHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESC
T ss_pred HHHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCC
Confidence 345555554 6899999998532 245667777777788776443
No 107
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=25.05 E-value=1.2e+02 Score=21.16 Aligned_cols=40 Identities=5% Similarity=0.008 Sum_probs=25.2
Q ss_pred hhCCCCccEEEEcCCCCCHHHHHHHhhh--CCcEEEeccCCCC
Q 029629 26 MLVPGKIQHIICTGNLSIKEVHDYLKSL--CPDLHVTRGEYDE 66 (190)
Q Consensus 26 ~~~~~~~D~vi~~GDl~~~~~~~~l~~l--~~~~~~v~GNHD~ 66 (190)
.+....||.++ ..|.-..++++.+++. ..|++++-+..|.
T Consensus 39 ~l~~~~~dlvi-lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~ 80 (223)
T 2hqr_A 39 LMDIRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPTS 80 (223)
T ss_dssp HHTTSCCSEEE-ECCTTHHHHHHHHHHHCTTSEEEEEESSCCH
T ss_pred HHhcCCCCEEE-eCCCCHHHHHHHHHhCCCCCcEEEEECCCCH
Confidence 34456788888 6665555666666654 3467777666553
No 108
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=24.97 E-value=1.3e+02 Score=19.39 Aligned_cols=45 Identities=13% Similarity=-0.030 Sum_probs=29.3
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHHHHHHH---hh-hCCcEEEeccCCCCC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKEVHDYL---KS-LCPDLHVTRGEYDED 67 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l---~~-l~~~~~~v~GNHD~~ 67 (190)
...+.+++.+.-+||++.|.-. .....+ .. ...|++.+.|+-+..
T Consensus 33 ~t~kai~~gkakLVilA~D~~~-~~~~~i~~~c~~~~ipv~~~~~s~~eL 81 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANNCPP-LRKSEIETYAMLAKISVHHFHGNNVDL 81 (112)
T ss_dssp HHHHHHHTTCCSEEEECSCCCH-HHHHHHHHHHHHTTCCEECCCCTTCTH
T ss_pred HHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCcEEEeCCCHHHH
Confidence 3344556678999999999865 233333 22 347888887777653
No 109
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.90 E-value=1.3e+02 Score=21.88 Aligned_cols=34 Identities=3% Similarity=-0.106 Sum_probs=26.0
Q ss_pred hCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029629 27 LVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTR 61 (190)
Q Consensus 27 ~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
+...++|.||+.+--. .+.++.+.+.+.|++++-
T Consensus 59 l~~~~vdgiIi~~~~~-~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 59 IGSRGFDGLILQSFSN-PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHTTTCSEEEEESSCC-HHHHHHHHTTSSCEEEES
T ss_pred HHhCCCCEEEEecCCc-HHHHHHHHHCCCCEEEEe
Confidence 3357899999988655 677788887778888773
No 110
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=24.76 E-value=84 Score=23.29 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=28.1
Q ss_pred HHhhhCCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 23 FKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 23 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
+.+.+...++|.||+.+--.+.+.++.+.+.+.|++++-.
T Consensus 57 ~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~~~ 96 (294)
T 3qk7_A 57 LIHLVETRRVDALIVAHTQPEDFRLQYLQKQNFPFLALGR 96 (294)
T ss_dssp HHHHHHHTCCSEEEECSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHcCCCCEEEEeCCCCChHHHHHHHhCCCCEEEECC
Confidence 3344444689999998865555677888887788887744
No 111
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=24.68 E-value=25 Score=26.81 Aligned_cols=65 Identities=11% Similarity=-0.033 Sum_probs=34.8
Q ss_pred CeEEEEEeec--------C---CC---CCCCChHHHHHhhhCCCCccEEEEcCCCCC--------------HHHHHHHhh
Q 029629 1 MVLVLAIGDL--------H---IP---HRASDLPQKFKSMLVPGKIQHIICTGNLSI--------------KEVHDYLKS 52 (190)
Q Consensus 1 Mmri~~iSD~--------H---~~---~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--------------~~~~~~l~~ 52 (190)
||||++++.. - .+ .+.......+.+.+.+.+.+..+++.+-.. ..+.+.+++
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 82 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRT 82 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTTEEECSCCSHHHHHHHHHH
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCcceeccCCcHHHHHHHHHh
Confidence 6999999997 1 11 111112223333344456777777765332 134556666
Q ss_pred hCCcEEEeccCCC
Q 029629 53 LCPDLHVTRGEYD 65 (190)
Q Consensus 53 l~~~~~~v~GNHD 65 (190)
....++.+.+...
T Consensus 83 ~~~Dvi~~~~~~~ 95 (342)
T 2iuy_A 83 ADVDVVHDHSGGV 95 (342)
T ss_dssp CCCSEEEECSSSS
T ss_pred cCCCEEEECCchh
Confidence 5555666665553
No 112
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=24.60 E-value=80 Score=24.15 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=26.0
Q ss_pred CCCccEEEEcCCCCC--HHHHHHHhhhCCcEEEeccC
Q 029629 29 PGKIQHIICTGNLSI--KEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~--~~~~~~l~~l~~~~~~v~GN 63 (190)
..+||+||..+...+ .+.++.|++++ |++.+..+
T Consensus 113 ~l~PDLIi~~~~~~~~~~~~~~~L~~~g-pvv~~~~~ 148 (326)
T 3tlk_A 113 AQMPDLILISATGGDSALALYDQLSTIA-PTLIINYD 148 (326)
T ss_dssp TTCCSEEEEESSSTTCCGGGHHHHHTTS-CEEEECCS
T ss_pred hCCCCEEEEeCCCccchHHHHHHHHhhC-CEEEEcCC
Confidence 478999998765433 46789999998 88888654
No 113
>2x4l_A Ferric-siderophore receptor protein; transport; 1.50A {Streptomyces coelicolor}
Probab=24.27 E-value=73 Score=24.38 Aligned_cols=33 Identities=15% Similarity=-0.104 Sum_probs=25.0
Q ss_pred CCccEEEEcCCC-------CCHHHHHHHhhhCCcEEEeccC
Q 029629 30 GKIQHIICTGNL-------SIKEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 30 ~~~D~vi~~GDl-------~~~~~~~~l~~l~~~~~~v~GN 63 (190)
.+||+||..+.. ...+.++.|+++ .|++.+..+
T Consensus 109 l~PDLIi~~~~~~~~~~~~~~~~~~~~L~~~-ipvv~~~~~ 148 (325)
T 2x4l_A 109 LAPEVLITTTFDTAGTLWSVPEESKDKVAKL-APSVAISVF 148 (325)
T ss_dssp TCCSEEEEEECSTTCCCTTSCGGGHHHHHHH-SCEEEEECS
T ss_pred cCCCEEEEcccccccccccccHHHHHHHHhh-CCEEEEccC
Confidence 689999986542 346778899988 789888753
No 114
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=24.04 E-value=1.3e+02 Score=18.83 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=27.1
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHHHHHHH----hhhCCcEEEeccCCC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKEVHDYL----KSLCPDLHVTRGEYD 65 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~~~~v~GNHD 65 (190)
...+.+++.++-.||++.|.-.. ....+ +....|++.+..+-+
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~ip~~~~~s~~e 71 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIH-TKKKLLDKCGSYQIPVKVVGNRQM 71 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHHTCCEEEESCHHH
T ss_pred HHHHHHHcCCCcEEEEeCCCCHH-HHHHHHHHHHHcCCCEEEeCCHHH
Confidence 44455667889999999998873 22222 233478887644333
No 115
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=23.35 E-value=43 Score=24.01 Aligned_cols=33 Identities=9% Similarity=-0.021 Sum_probs=20.0
Q ss_pred eEEEEEeecCCCCCCCChHHHHHhhhCC--CCccEEEEcC
Q 029629 2 VLVLAIGDLHIPHRASDLPQKFKSMLVP--GKIQHIICTG 39 (190)
Q Consensus 2 mri~~iSD~H~~~~~~~~~~~l~~~~~~--~~~D~vi~~G 39 (190)
|||++-||-=+ .++.+.+.+.+++ ...+ |+-.|
T Consensus 23 MkIaIgsDhaG----~~lK~~i~~~L~~~~~G~e-V~D~G 57 (179)
T 3k7p_A 23 RRVAIGTDHPA----FAIHENLILYVKEAGDEFV-PVYCG 57 (179)
T ss_dssp EEEEEEECTGG----GGGHHHHHHHHHHTCTTEE-EEECS
T ss_pred eEEEEEECchH----HHHHHHHHHHHHhcCCCCe-EEEcC
Confidence 78888888653 2456666666654 4443 44445
No 116
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=23.32 E-value=39 Score=24.37 Aligned_cols=20 Identities=10% Similarity=-0.032 Sum_probs=15.8
Q ss_pred HHHHHhhhCCCCccEEEEcC
Q 029629 20 PQKFKSMLVPGKIQHIICTG 39 (190)
Q Consensus 20 ~~~l~~~~~~~~~D~vi~~G 39 (190)
.+.+.+++++.+||+|+++|
T Consensus 46 ~~~l~~~~~~~~pd~vi~~G 65 (192)
T 2ebj_A 46 LGEALEDLHREGPKAVLHLG 65 (192)
T ss_dssp HHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEec
Confidence 45666667677899999999
No 117
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=23.14 E-value=33 Score=22.13 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=18.4
Q ss_pred HHHHhhccCccEEEeCCCCCcceEE--EcCeEEE
Q 029629 100 LAMLQRQLDVDILVTGHTHQFKAYK--HEGGVVI 131 (190)
Q Consensus 100 ~~~~~~~~~~~~vi~GHtH~~~~~~--~~~~~~i 131 (190)
+..++...+++++++|..-...... ..|+.++
T Consensus 54 ~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~ 87 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIASNVGRNAFETLKAAGVKVY 87 (116)
T ss_dssp HHHHHHTTTCCEEECSSCCSSCHHHHHTTTCEEE
T ss_pred HHHHHHHcCCCEEEECCCCHhHHHHHHHCCCEEE
Confidence 3344556788888888875543322 2355544
No 118
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=23.11 E-value=70 Score=24.23 Aligned_cols=33 Identities=6% Similarity=-0.000 Sum_probs=25.4
Q ss_pred CCccEEEEcCCCC--CHHHHHHHhhhCCcEEEeccC
Q 029629 30 GKIQHIICTGNLS--IKEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 30 ~~~D~vi~~GDl~--~~~~~~~l~~l~~~~~~v~GN 63 (190)
.+||+||..+... ..+.++.|++++ |++.+..+
T Consensus 85 l~PDLIi~~~~~~~~~~~~~~~L~~~~-Pvv~~~~~ 119 (305)
T 3r5t_A 85 EQPDLIVVSMIGADSARDQIPLLQAIA-PTILVDYS 119 (305)
T ss_dssp HCCSEEEEESSSTTCCGGGHHHHHTTS-CEEEECCT
T ss_pred cCCCEEEEecccccccHHHHHHHHHhC-CEEEEcCC
Confidence 5799999877543 367789999998 88887654
No 119
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=22.91 E-value=58 Score=24.61 Aligned_cols=36 Identities=11% Similarity=0.031 Sum_probs=20.2
Q ss_pred CeEEEEEeecCCCCCCCChHHHHHhhhCCCCccEEEEcCC
Q 029629 1 MVLVLAIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGN 40 (190)
Q Consensus 1 Mmri~~iSD~H~~~~~~~~~~~l~~~~~~~~~D~vi~~GD 40 (190)
||||++.-|==... .-++.|.+.+++.. |+++++=|
T Consensus 1 ~M~ILlTNDDGi~a---pGi~aL~~~l~~~g-~V~VVAP~ 36 (251)
T 2phj_A 1 MPTFLLVNDDGYFS---PGINALREALKSLG-RVVVVAPD 36 (251)
T ss_dssp -CEEEEECSSCTTC---HHHHHHHHHHTTTS-EEEEEEES
T ss_pred CCEEEEECCCCCCC---HHHHHHHHHHHhcC-CEEEEecC
Confidence 78988888754321 22455666554444 66666544
No 120
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=22.73 E-value=1e+02 Score=20.76 Aligned_cols=43 Identities=12% Similarity=-0.016 Sum_probs=28.5
Q ss_pred HhhhCCCCccEEEEcCCCCCHHHH----HHHhhhCCcEEEeccCCCC
Q 029629 24 KSMLVPGKIQHIICTGNLSIKEVH----DYLKSLCPDLHVTRGEYDE 66 (190)
Q Consensus 24 ~~~~~~~~~D~vi~~GDl~~~~~~----~~l~~l~~~~~~v~GNHD~ 66 (190)
.+.+++.+.-+||++.|.-..++. ..-++.+.|++++.++-+.
T Consensus 41 ~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eL 87 (134)
T 2ale_A 41 TKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVAL 87 (134)
T ss_dssp HHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHH
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHH
Confidence 344556788999999998774322 2233446788888766654
No 121
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=22.35 E-value=1.5e+02 Score=18.54 Aligned_cols=42 Identities=5% Similarity=-0.083 Sum_probs=26.3
Q ss_pred HHHhhhCCCCccEEEEcCCCCCHH--HHHHH-hhhCCcEEEeccC
Q 029629 22 KFKSMLVPGKIQHIICTGNLSIKE--VHDYL-KSLCPDLHVTRGE 63 (190)
Q Consensus 22 ~l~~~~~~~~~D~vi~~GDl~~~~--~~~~l-~~l~~~~~~v~GN 63 (190)
...+.+++.++-+||++.|..... -+..+ +....|++.+..+
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~ 70 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESR 70 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCH
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechH
Confidence 344556678899999999988741 12222 2234688887433
No 122
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=22.27 E-value=1.4e+02 Score=22.85 Aligned_cols=32 Identities=3% Similarity=-0.025 Sum_probs=25.5
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEe
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVT 60 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v 60 (190)
..++|.+|+++--.+.+.++.+.+.+.|++.+
T Consensus 124 ~~~vdGiI~~~~~~~~~~~~~l~~~~iPvV~i 155 (355)
T 3e3m_A 124 RRRPEAMVLSYDGHTEQTIRLLQRASIPIVEI 155 (355)
T ss_dssp HTCCSEEEEECSCCCHHHHHHHHHCCSCEEEE
T ss_pred hCCCCEEEEeCCCCCHHHHHHHHhCCCCEEEE
Confidence 46899999988666667778888877888888
No 123
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=21.95 E-value=1.7e+02 Score=18.83 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=21.4
Q ss_pred hCCCCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEeccCCC
Q 029629 27 LVPGKIQHIICTGNLSI---KEVHDYLKSLC--PDLHVTRGEYD 65 (190)
Q Consensus 27 ~~~~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD 65 (190)
+.+..+|.|++-=++-+ .++++.+++.. .|++++.++.+
T Consensus 62 l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 62 LEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred hhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 44566777777554444 34555555433 35666655544
No 124
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=21.94 E-value=1.7e+02 Score=22.15 Aligned_cols=29 Identities=10% Similarity=-0.084 Sum_probs=20.6
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEE
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLH 58 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~ 58 (190)
..||++|++.=..+...+..-++++.|++
T Consensus 116 ~~PdllvV~Dp~~d~~ai~EA~~l~IP~I 144 (252)
T 3u5c_A 116 KEPRLVIVTDPRSDAQAIKEASYVNIPVI 144 (252)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHTTTCCEE
T ss_pred cCCceEEEeCCccchHHHHHHHHcCCCEE
Confidence 46899999865555666666777777765
No 125
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=21.87 E-value=28 Score=27.06 Aligned_cols=11 Identities=0% Similarity=-0.109 Sum_probs=8.3
Q ss_pred CeEEEEEeecC
Q 029629 1 MVLVLAIGDLH 11 (190)
Q Consensus 1 Mmri~~iSD~H 11 (190)
||||++++..-
T Consensus 20 ~MkIl~i~~~~ 30 (406)
T 2gek_A 20 HMRIGMVCPYS 30 (406)
T ss_dssp -CEEEEECSSC
T ss_pred cceEEEEeccC
Confidence 79999999643
No 126
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=21.74 E-value=1.4e+02 Score=21.50 Aligned_cols=33 Identities=9% Similarity=0.113 Sum_probs=24.4
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTR 61 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
..++|.+|+.+--.+.+.++.+.+.+.|++++-
T Consensus 57 ~~~vdgii~~~~~~~~~~~~~l~~~~iPvV~~~ 89 (275)
T 3d8u_A 57 ESRPAGVVLFGSEHSQRTHQLLEASNTPVLEIA 89 (275)
T ss_dssp TSCCCCEEEESSCCCHHHHHHHHHHTCCEEEES
T ss_pred hcCCCEEEEeCCCCCHHHHHHHHhCCCCEEEEe
Confidence 578999888875455667777777778888773
No 127
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=21.40 E-value=33 Score=25.30 Aligned_cols=21 Identities=10% Similarity=0.256 Sum_probs=15.8
Q ss_pred HHHHHhhhCCCCccEEEEcCC
Q 029629 20 PQKFKSMLVPGKIQHIICTGN 40 (190)
Q Consensus 20 ~~~l~~~~~~~~~D~vi~~GD 40 (190)
.+.+.+++++.+||+||++|=
T Consensus 51 ~~~l~~~i~~~~Pd~Vi~vG~ 71 (215)
T 3giu_A 51 DNIINKTLASNHYDVVLAIGQ 71 (215)
T ss_dssp HHHHHHHHHHSCCSEEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecc
Confidence 345666666789999999993
No 128
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=21.28 E-value=1.2e+02 Score=19.08 Aligned_cols=37 Identities=19% Similarity=0.055 Sum_probs=19.1
Q ss_pred CCCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEeccCCC
Q 029629 29 PGKIQHIICTGNLSI---KEVHDYLKSLC--PDLHVTRGEYD 65 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD 65 (190)
+..+|.|++--++-+ .+.++.+++.. .|++++.+..+
T Consensus 49 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 90 (137)
T 3hdg_A 49 LHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSE 90 (137)
T ss_dssp HHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCC
T ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcC
Confidence 345777777555444 34455555433 34555555444
No 129
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.12 E-value=1.6e+02 Score=18.27 Aligned_cols=40 Identities=10% Similarity=-0.013 Sum_probs=25.6
Q ss_pred hCCCCccEEEEcCCCCC---HHHHHHHhhh----CCcEEEeccCCCC
Q 029629 27 LVPGKIQHIICTGNLSI---KEVHDYLKSL----CPDLHVTRGEYDE 66 (190)
Q Consensus 27 ~~~~~~D~vi~~GDl~~---~~~~~~l~~l----~~~~~~v~GNHD~ 66 (190)
+.+..+|.|++-=++-+ .++++.+++. ..|++++.+..+.
T Consensus 43 l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~ 89 (133)
T 3nhm_A 43 ALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPR 89 (133)
T ss_dssp HHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-
T ss_pred HhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcH
Confidence 34467899888655544 4566667664 2578888776654
No 130
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=21.01 E-value=92 Score=20.35 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=29.5
Q ss_pred hhCCCCccEEEEcCCCCC-----HHHHHHHhhhCCcEEEeccCCCCC
Q 029629 26 MLVPGKIQHIICTGNLSI-----KEVHDYLKSLCPDLHVTRGEYDED 67 (190)
Q Consensus 26 ~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~~~~v~GNHD~~ 67 (190)
.+++..||.|+. |+.= .++++.+++...|++++-|+-|..
T Consensus 48 ~~~~~~~Dlvll--Di~mP~~~G~el~~~lr~~~ipvI~lTa~~~~~ 92 (123)
T 2lpm_A 48 IARKGQFDIAII--DVNLDGEPSYPVADILAERNVPFIFATGYGSKG 92 (123)
T ss_dssp HHHHCCSSEEEE--CSSSSSCCSHHHHHHHHHTCCSSCCBCTTCTTS
T ss_pred HHHhCCCCEEEE--ecCCCCCCHHHHHHHHHcCCCCEEEEecCccHH
Confidence 344578999988 5442 578888888778999999976653
No 131
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=20.87 E-value=2.5e+02 Score=20.47 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=24.4
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTR 61 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
..++|.||+.+--.+.+.++.+.+.+.|++.+-
T Consensus 65 ~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 65 GRDCDGVVVISHDLHDEDLDELHRMHPKMVFLN 97 (290)
T ss_dssp HTTCSEEEECCSSSCHHHHHHHHHHCSSEEEES
T ss_pred hcCccEEEEecCCCCHHHHHHHhhcCCCEEEEc
Confidence 468999999875445566777777777888773
No 132
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=20.81 E-value=62 Score=24.43 Aligned_cols=31 Identities=10% Similarity=-0.086 Sum_probs=23.3
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
..+||+||..+ ...+.++.|++++ |++.+.-
T Consensus 93 ~l~PDlIi~~~--~~~~~~~~L~~~~-p~v~~~~ 123 (303)
T 3gfv_A 93 ELDPDLIIISA--RQSESYKEFSKIA-PTIYLGV 123 (303)
T ss_dssp HTCCSEEEECG--GGGGGHHHHHHHS-CEEECCC
T ss_pred hCCCCEEEEcC--cchhHHHHHHhhC-CEEEEcC
Confidence 36899999865 3456788899886 7877764
No 133
>1efd_N Ferrichrome-binding periplasmic protein; periplasmic binding protein-siderophore complex, FHUD complex with gallichrome; HET: GCR; 1.90A {Escherichia coli} SCOP: c.92.2.1 PDB: 1k7s_N* 1k2v_N* 1esz_A*
Probab=20.79 E-value=47 Score=24.52 Aligned_cols=29 Identities=7% Similarity=-0.061 Sum_probs=21.8
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEEec
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHVTR 61 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~ 61 (190)
.+||+||..+ . ..+.++.|++++ |++.+.
T Consensus 65 l~PDLIi~~~-~-~~~~~~~L~~i~-pvv~~~ 93 (266)
T 1efd_N 65 MKPSFMVWSA-G-YGPSPEMLARIA-PGRGFN 93 (266)
T ss_dssp HCCSEEEEET-T-SSSCHHHHHHHS-CEEEEC
T ss_pred cCCCEEEecc-c-cHHHHHHHHhhC-CEEEec
Confidence 5799999754 2 345678888888 888886
No 134
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=20.78 E-value=52 Score=24.16 Aligned_cols=32 Identities=16% Similarity=0.068 Sum_probs=24.1
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
.+||+||..+. ...+..+.|++++.|++.+..
T Consensus 59 l~PDLIi~~~~-~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 59 LKPTHVLSVST-IKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp TCCSEEEEEGG-GHHHHHHHHHHHTSCCEEECC
T ss_pred cCCCEEEecCc-cCHHHHHHHHHcCCcEEEecC
Confidence 68999997653 335678899999878887764
No 135
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=20.64 E-value=97 Score=23.50 Aligned_cols=31 Identities=6% Similarity=-0.076 Sum_probs=23.7
Q ss_pred CCccEEEEcCCCCCHHHHHHHhhhCCcEEEecc
Q 029629 30 GKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRG 62 (190)
Q Consensus 30 ~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~G 62 (190)
.+||+||..+. ...+.++.|++++ |++++..
T Consensus 95 l~PDLIi~~~~-~~~~~~~~L~~~g-p~v~~~~ 125 (311)
T 2wi8_A 95 MKPDVILASTK-FPEKTLQKISTAG-TTIPVSH 125 (311)
T ss_dssp HCCSEEEEETT-SCHHHHHHHHTTS-CEEEECC
T ss_pred CCCCEEEEcCc-cCHHHHHHHHhhC-CEEEeeC
Confidence 57999997654 4677889999987 6777753
No 136
>3lhs_A Ferrichrome ABC transporter lipoprotein; siderophore, iron, receptor, binding protein, T protein; HET: SF8; 1.30A {Staphylococcus aureus subsp} PDB: 3eiw_A 3eix_A* 3li2_A*
Probab=20.62 E-value=90 Score=23.33 Aligned_cols=33 Identities=15% Similarity=0.080 Sum_probs=24.4
Q ss_pred CCCccEEEEcCCCCCHHHHHHHhhhCCcEEEeccC
Q 029629 29 PGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGE 63 (190)
Q Consensus 29 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v~GN 63 (190)
..+||+||.... ...+.++.|+++. |++.+..+
T Consensus 83 ~l~PDLIi~~~~-~~~~~~~~L~~~~-p~v~~~~~ 115 (296)
T 3lhs_A 83 KLKPDLIIADSS-RHKGINKELNKIA-PTLSLKSF 115 (296)
T ss_dssp HTCCSEEEEETT-TTTTTHHHHHHHS-CEEEECST
T ss_pred hCCCCEEEECCc-cCHHHHHHHHhhC-CEEEecCC
Confidence 368999998654 3456678888885 88888754
No 137
>2ll1_A U1-TRTX-SP1A; toxin; NMR {Theraphosidae}
Probab=20.53 E-value=31 Score=16.62 Aligned_cols=9 Identities=33% Similarity=0.423 Sum_probs=6.5
Q ss_pred eCCCCCcce
Q 029629 114 TGHTHQFKA 122 (190)
Q Consensus 114 ~GHtH~~~~ 122 (190)
|||.|.|..
T Consensus 2 cghlhdpcp 10 (33)
T 2ll1_A 2 CGHLHDPCP 10 (33)
T ss_dssp CBCSSCBCT
T ss_pred CcccCCCCC
Confidence 688887654
No 138
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=20.53 E-value=1.7e+02 Score=22.08 Aligned_cols=33 Identities=9% Similarity=0.061 Sum_probs=24.4
Q ss_pred CCCCccEEEEcCCCCCHHHHHHHhhhCCcEEEe
Q 029629 28 VPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVT 60 (190)
Q Consensus 28 ~~~~~D~vi~~GDl~~~~~~~~l~~l~~~~~~v 60 (190)
...++|.||+.+--.+.+.++.+.+.+.|++++
T Consensus 115 ~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~ 147 (339)
T 3h5o_A 115 LQHRPDGVLITGLSHAEPFERILSQHALPVVYM 147 (339)
T ss_dssp HTTCCSEEEEECSCCCTTHHHHHHHTTCCEEEE
T ss_pred HcCCCCEEEEeCCCCCHHHHHHHhcCCCCEEEE
Confidence 357899999988444456677777777888887
No 139
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=20.46 E-value=55 Score=22.45 Aligned_cols=41 Identities=17% Similarity=0.062 Sum_probs=25.3
Q ss_pred hhCCCCccEEEEcCCCCCHHHHHHHhhh----CCcEEEeccCCCC
Q 029629 26 MLVPGKIQHIICTGNLSIKEVHDYLKSL----CPDLHVTRGEYDE 66 (190)
Q Consensus 26 ~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~~~~v~GNHD~ 66 (190)
.+++.+.-+||+++|.-..++...+..+ +.|++++.++-+.
T Consensus 61 aI~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v~sk~eL 105 (144)
T 2jnb_A 61 TLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQAL 105 (144)
T ss_dssp HHHHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEESCSHHH
T ss_pred HHHhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEECCHHHH
Confidence 3445677888888887765444444332 4677777766553
No 140
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.21 E-value=1.6e+02 Score=18.12 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=21.5
Q ss_pred hCCCCccEEEEcCCCCC---HHHHHHHhhhC--CcEEEeccCCCC
Q 029629 27 LVPGKIQHIICTGNLSI---KEVHDYLKSLC--PDLHVTRGEYDE 66 (190)
Q Consensus 27 ~~~~~~D~vi~~GDl~~---~~~~~~l~~l~--~~~~~v~GNHD~ 66 (190)
+++.++|.|++-=++-+ .++++.+++.. .|++++.+..+.
T Consensus 47 l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~ 91 (130)
T 3eod_A 47 LGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENM 91 (130)
T ss_dssp HTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCH
T ss_pred HhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCH
Confidence 44566788777544333 35555665543 466666665543
Done!