BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029632
MVKMEKQEEVVTVKLRAIEATAESFKEYGQVIEASADGEEFGPQDAQLDLSRGIPRFYVM
HLENRPLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGH
FYVPPAIEDVRVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSNTNVVDHTTHSFK
KNGVVYTIDD

High Scoring Gene Products

Symbol, full name Information P value
AT2G35820 protein from Arabidopsis thaliana 3.4e-61
AT2G35810 protein from Arabidopsis thaliana 5.7e-59

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029632
        (190 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039190 - symbol:AT2G35820 species:3702 "Arabi...   626  3.4e-61   1
TAIR|locus:2039205 - symbol:AT2G35810 "AT2G35810" species...   605  5.7e-59   1


>TAIR|locus:2039190 [details] [associations]
            symbol:AT2G35820 species:3702 "Arabidopsis thaliana"
            [GO:0000256 "allantoin catabolic process" evidence=IEA] [GO:0004848
            "ureidoglycolate hydrolase activity" evidence=IEA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0048573 "photoperiodism, flowering"
            evidence=RCA] InterPro:IPR007247 InterPro:IPR024060 Pfam:PF04115
            InterPro:IPR011051 SUPFAM:SSF51182 GO:GO:0005829 EMBL:CP002685
            GO:GO:0000256 GO:GO:0004848 Gene3D:2.60.120.480 EMBL:AC007017
            UniGene:At.48554 ProtClustDB:CLSN2688717 EMBL:BT025753
            IPI:IPI00525589 PIR:D84773 RefSeq:NP_565826.1 UniGene:At.48553
            ProteinModelPortal:Q9SJ68 SMR:Q9SJ68 STRING:Q9SJ68 PRIDE:Q9SJ68
            EnsemblPlants:AT2G35820.1 GeneID:818155 KEGG:ath:AT2G35820
            TAIR:At2g35820 InParanoid:Q9SJ68 OMA:TISHRRL PhylomeDB:Q9SJ68
            ArrayExpress:Q9SJ68 Genevestigator:Q9SJ68 Uniprot:Q9SJ68
        Length = 192

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/180 (64%), Positives = 140/180 (77%)

Query:    11 VTVKLRAIEATAESFKEYGQVIEASADGEEFGPQDAQLDLSRGIPRFYVMHLENRPLKFS 70
             V VKL  IEAT E+F +YGQVIEAS DG  FGP DAQLDLSRGIPRFY+M + + P  FS
Sbjct:     6 VEVKLIPIEATPENFADYGQVIEASRDGAGFGPNDAQLDLSRGIPRFYIMRIRDTPFDFS 65

Query:    71 TITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDV 130
              +THHASVTQCLGSIGGHVWYLGVAKP++++  + +G M  + ++S  GH Y PPA+E++
Sbjct:    66 VLTHHASVTQCLGSIGGHVWYLGVAKPTLIEDGD-DGKM-VDKLKSRSGHLYAPPAVEEI 123

Query:   131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSNTNVVDHTTHSFKKN-GVVYTID 189
             RVF+++GPKF+KLN GTWH GPLF    MDFYNLELSNTN VD TT+ F KN GV   +D
Sbjct:   124 RVFRVSGPKFIKLNHGTWHVGPLFSDSYMDFYNLELSNTNAVDRTTYDFIKNKGVTIRVD 183


>TAIR|locus:2039205 [details] [associations]
            symbol:AT2G35810 "AT2G35810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0019344 "cysteine biosynthetic process"
            evidence=RCA] InterPro:IPR024060 InterPro:IPR011051 SUPFAM:SSF51182
            GO:GO:0005829 EMBL:CP002685 GO:GO:0004848 Gene3D:2.60.120.480
            EMBL:AY063956 EMBL:AY114072 IPI:IPI00547017 RefSeq:NP_565825.2
            UniGene:At.27416 UniGene:At.48554 ProteinModelPortal:Q8VZP3
            SMR:Q8VZP3 STRING:Q8VZP3 PRIDE:Q8VZP3 ProMEX:Q8VZP3 DNASU:818154
            EnsemblPlants:AT2G35810.1 GeneID:818154 KEGG:ath:AT2G35810
            TAIR:At2g35810 HOGENOM:HOG000264542 InParanoid:Q8VZP3 OMA:GNCFIKL
            PhylomeDB:Q8VZP3 ProtClustDB:CLSN2688717 Genevestigator:Q8VZP3
            Uniprot:Q8VZP3
        Length = 199

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 114/190 (60%), Positives = 140/190 (73%)

Query:     2 VKMEKQEEVVTVKLRAIEATAESFKEYGQVIEASADGEEFGPQDAQLDLSRGIPRFYVMH 61
             VK    +  V V L  IEAT E+F EYGQVIEAS DG  +GP DAQLDLS+GIPR Y++ 
Sbjct:    11 VKSTMAKSPVEVNLIPIEATPETFAEYGQVIEASRDGAGYGPNDAQLDLSKGIPRLYILR 70

Query:    62 LENRPLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHF 121
             L+  PL F  ITHHA VTQCLGSIGG +WY+GVAKPS+++  +    + T  V++  GH 
Sbjct:    71 LKETPLGFFKITHHAKVTQCLGSIGGDIWYMGVAKPSLIEDDDDGRRVDT--VKAKSGHL 128

Query:   122 YVPPAIEDVRVFKIAGPKFLKLNRGTWHAGPLFKADD-MDFYNLELSNTNVVDHTTHSF- 179
             Y+PP +E++RVF+ +GPKF+KL+RGTWHAGPLF     MDFYNLELSNTNVVDHT+H F 
Sbjct:   129 YIPPEVEEIRVFRFSGPKFVKLHRGTWHAGPLFSGSSIMDFYNLELSNTNVVDHTSHDFT 188

Query:   180 KKNGVVYTID 189
             K NGV +  D
Sbjct:   189 KNNGVSFRFD 198


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      190       190   0.00091  110 3  11 22  0.46    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  162 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.03u 0.14s 17.17t   Elapsed:  00:00:01
  Total cpu time:  17.03u 0.14s 17.17t   Elapsed:  00:00:01
  Start:  Sat May 11 05:26:44 2013   End:  Sat May 11 05:26:45 2013

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