BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029635
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GW64|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana
GN=At1g18440 PE=2 SV=2
Length = 288
Score = 213 bits (542), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/130 (76%), Positives = 116/130 (89%), Gaps = 1/130 (0%)
Query: 61 ESLVSPKPKQQQ-QHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH 119
++L S KPK Q PWLIVGLGNPGK+Y GTRHNVGFEMVDA+A+AEGIS+++VNFKA
Sbjct: 79 QALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKAL 138
Query: 120 FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPK 179
FGKG IGN+P+MLAKPQTFMN SG+SVG IVS+YKIPLKQVLV++DDLDLPF K+RLLPK
Sbjct: 139 FGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPK 198
Query: 180 GGHGGHNGYK 189
GGHGGHNG +
Sbjct: 199 GGHGGHNGMR 208
>sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os01g0693900 PE=2 SV=1
Length = 250
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/115 (78%), Positives = 103/115 (89%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWL VGLGNPGK Y GTRHNVGFEM+D IAEAEGIS+SS+ FKA GKG IG+ P+MLAK
Sbjct: 55 PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAK 114
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
PQTFMNASG+SVG +VSY+KIPL QVLV++DDLDLPF+K+RLLPKGGHGGHNG +
Sbjct: 115 PQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVR 169
>sp|Q6NLS8|PTHM_ARATH Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana
GN=At5g19830 PE=2 SV=1
Length = 219
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 90/115 (78%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWL +GLGNPG +Y GTRHN+GFEM+D AE+ GI ++ VNFKA G+GF+ ++PV+LAK
Sbjct: 18 PWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAK 77
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
PQT+MN SG+S G + +YYK+PL +VLV+ DD+ LP +RL KGGHG HNG K
Sbjct: 78 PQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLK 132
>sp|Q10LI6|CRS2L_ORYSJ CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os03g0347800 PE=2 SV=1
Length = 186
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 92/114 (80%)
Query: 74 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLA 133
+PWL VGLGNPG++Y TRHNVGF+M+D A+++GIS++ FKA FG+G + VPV+LA
Sbjct: 59 NPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLA 118
Query: 134 KPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 187
KPQT+MN SG+SVG + +YYK+PL +VLV FDD+DLP +RL PKGG+G HNG
Sbjct: 119 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>sp|Q5ZCL8|CRS2_ORYSJ Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0132800 PE=2 SV=1
Length = 259
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 30 SPLCCWGRRTRMSRSPSNSTIRNFSSSISNEESLVSPKPKQQQQHPWLIVGLGNPGKQYN 89
SP C RR +S + + I+ S+ P + + PWLI GLGNPG +Y+
Sbjct: 20 SPEPCRRRRLLLS-AAAPLRRTRLRRRIAVVASVPDPAARPAEYTPWLIAGLGNPGSKYH 78
Query: 90 GTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSI 149
GTRHNVGFEMVD IA EGI+++++ K+ G G IG VPV+L KPQ+++N SG+++G +
Sbjct: 79 GTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPL 138
Query: 150 VSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
+YY++PL+ +LV++D++ LP +RL KGGHG HNG +
Sbjct: 139 AAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQ 178
>sp|Q9LF14|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B,
chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1
Length = 240
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 92/115 (80%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWLIVGLGNPG +Y+GTRHNVGFEM+D +A EG+ ++++ KA G G I +VP++LAK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
PQT+MN SG+SVGS+ S+Y++PL+ +L+I+D++ LP +RL PKGG G HNG K
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVK 159
>sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1
Length = 256
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 92/128 (71%)
Query: 62 SLVSPKPKQQQQHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFG 121
S+ P + PWLI GLGNPG +Y GTRHNVGFEMVD IA EGI+++++ K+ G
Sbjct: 48 SVPDPAAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLG 107
Query: 122 KGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGG 181
G IG VPV++ KPQ++MN SG+++G + +YY++PL+ +L+I+DD LP +RL KGG
Sbjct: 108 IGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGG 167
Query: 182 HGGHNGYK 189
HG HNG +
Sbjct: 168 HGRHNGLQ 175
>sp|Q9FKN4|CRS2A_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-A,
chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1
Length = 246
Score = 146 bits (369), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 87/115 (75%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWLIVGLGNPG +Y GTRHN+GFEM+D IA A IS++++ KA G G +G VP++L K
Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 110
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
PQ +MN SG+SVG + +YY+IPL+ +L+I+DD+ L +RL PKGGH HNG K
Sbjct: 111 PQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLK 165
>sp|B1YGP7|PTH_EXIS2 Peptidyl-tRNA hydrolase OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=pth PE=3 SV=1
Length = 185
Score = 133 bits (334), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%)
Query: 78 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQT 137
IVGLGNPG +Y TRHN+GF +DA+A+ GI ++ FKA FG G I V+L KP T
Sbjct: 4 IVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLT 63
Query: 138 FMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
+MN SG++V ++ +YKI ++ VLVI+DDLDLP KMRL KG GGHNG K
Sbjct: 64 YMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVK 115
>sp|Q8R757|PTH_THETN Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=pth PE=3
SV=1
Length = 185
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 82/112 (73%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPGK+Y GTRHNVGF ++DA+++ GI VS + FK+ G+G V+L KP
Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 187
QTFMN SG+++ V++YKIPL+ V+V++DD DL K+R+ KG GGHNG
Sbjct: 62 QTFMNLSGEALYDAVNFYKIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNG 113
>sp|A0PXL3|PTH_CLONN Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth
PE=3 SV=1
Length = 188
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPGK+Y TRHNVGF+++D I+E I ++ FK +G G I N V+L KP
Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ + +YKIP + V+VI+DD+ L +MR+ KG GGHNG K
Sbjct: 62 LTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIK 115
>sp|Q899I4|PTH_CLOTE Peptidyl-tRNA hydrolase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=pth PE=3 SV=1
Length = 188
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 77/114 (67%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGNPGK+Y TRHN+GFE VD I+ I + FK FG G I N V+L KP
Sbjct: 2 FLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ I+ YY IP+ V+VI+DD+DL ++R+ KG GGHNG K
Sbjct: 62 TTYMNLSGESLREIIEYYNIPITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIK 115
>sp|Q181A2|PTH_CLOD6 Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630)
GN=pth PE=3 SV=1
Length = 186
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 81/114 (71%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+++VGLGNPGK+Y TRHNVGF+++D +A+ ISV+ + KA G+G +G V+L KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QT+MN SG+++ I YYK+ L ++V++DD+DL K+R+ KG G HNG K
Sbjct: 62 QTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMK 115
>sp|B8G3X3|PTH_CHLAD Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=pth PE=3 SV=1
Length = 188
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLIVGLGNPG++Y TRHN+GF V+ +AE G++ + K+ +G I V L KP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QT+MN SGQ+V ++ +YKI P +++LVI+DDLDLPF+K+RL +G G HNG +
Sbjct: 62 QTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMR 116
>sp|A7GJW3|PTH_BACCN Peptidyl-tRNA hydrolase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=pth PE=3 SV=1
Length = 186
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI L+ ++++DDLDLP K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVK 115
>sp|Q9KGJ3|PTH_BACHD Peptidyl-tRNA hydrolase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=pth PE=3
SV=1
Length = 185
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 77/113 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG +Y+GTRHNVGF++VDA+A I + +G+G I + L KPQ
Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
TFMN SG+SV + YY + ++ +LVI+DDLDLP K+RL KG GGHNG K
Sbjct: 63 TFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMK 115
>sp|B0K466|PTH_THEPX Peptidyl-tRNA hydrolase OS=Thermoanaerobacter sp. (strain X514)
GN=pth PE=3 SV=1
Length = 184
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 83/112 (74%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPG++Y GTRHNVGF ++D +A+ G++V+ + FK+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 187
QTFMN+SG+++ V++YKIPL+ V+VI+DD DL K+R+ KG GGHNG
Sbjct: 62 QTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDLGKIRIRKKGSSGGHNG 113
>sp|A8MK43|PTH_ALKOO Peptidyl-tRNA hydrolase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=pth PE=3 SV=1
Length = 185
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
+IVGLGNPGK+Y+ TRHN+GFE +D +A+ I V + KA G+G IG V+L KPQ
Sbjct: 3 IIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
TFMN SGQS+ IV +YK+ K ++V++DD+D+P +R+ KG G HNG K
Sbjct: 63 TFMNLSGQSLLDIVQFYKVDPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMK 115
>sp|Q9F8Q3|PTH_CARHZ Peptidyl-tRNA hydrolase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=pth PE=3 SV=2
Length = 187
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 80/112 (71%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPG++Y TRHN GF +VD +A+ GI ++ FK+ G+G I V V+L KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 187
QT+MN SG +V VS+YK+PL +++V++DDLDLP K+RL KG GGH G
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRG 113
>sp|A6LPJ5|PTH_CLOB8 Peptidyl-tRNA hydrolase OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=pth PE=3 SV=1
Length = 191
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 78/114 (68%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPG +Y TRHN+GF+++D IA+ I ++ FK +G+GFI VML KP
Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV +V +Y + ++LVI+DD+ L K+R+ KG GGHNG K
Sbjct: 62 TTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIK 115
>sp|B9LE93|PTH_CHLSY Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=pth PE=3 SV=1
Length = 188
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLIVGLGNPG++Y TRHN+GF VD +AE G++ + +G I V+LAKP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKP 61
Query: 136 QTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QT+MN SGQ+V ++ ++YKI P +++LVI+DDLDLPF+K+R+ +G G HNG +
Sbjct: 62 QTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMR 116
>sp|A9WBS1|PTH_CHLAA Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=pth PE=3 SV=1
Length = 188
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLIVGLGNPG++Y TRHN+GF VD +AE G++ + +G I V+LAKP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKP 61
Query: 136 QTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QT+MN SGQ+V ++ ++YKI P +++LVI+DDLDLPF+K+R+ +G G HNG +
Sbjct: 62 QTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMR 116
>sp|B2UXS9|PTH_CLOBA Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=pth PE=3 SV=1
Length = 191
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPG +Y+ TRHN+GFE++D I+ I ++ FK +G+GFI N V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG SV + ++YKI + ++VI+DD+ L ++R+ KG GGHNG K
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIK 115
>sp|Q6HPW6|PTH_BACHK Peptidyl-tRNA hydrolase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=pth PE=3 SV=1
Length = 186
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVK 115
>sp|Q81VY9|PTH_BACAN Peptidyl-tRNA hydrolase OS=Bacillus anthracis GN=pth PE=3 SV=1
Length = 186
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVK 115
>sp|B2TI10|PTH_CLOBB Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=pth PE=3 SV=1
Length = 191
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPG +Y+ TRHN+GFE++D I+ I ++ F+ +G+GFI N V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG SV + ++YKI + ++VI+DD+ L ++R+ KG GGHNG K
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIK 115
>sp|Q63HI2|PTH_BACCZ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ZK / E33L)
GN=pth PE=3 SV=1
Length = 186
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVK 115
>sp|B9IZD4|PTH_BACCQ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain Q1) GN=pth PE=3
SV=1
Length = 186
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVK 115
>sp|B0KBG1|PTH_THEP3 Peptidyl-tRNA hydrolase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=pth PE=3 SV=1
Length = 184
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 83/112 (74%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPG++Y GTRHNVGF ++D +A+ G++V+ + FK+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 187
QTF+N+SG+++ V++YKIPL+ V+VI+DD DL K+R+ KG GGHNG
Sbjct: 62 QTFVNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNG 113
>sp|A6TJM7|PTH_ALKMQ Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=pth PE=3 SV=1
Length = 185
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 83/114 (72%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++IVGLGNPGK+Y+GTRHNVGF+++D +A GI+V+ + KA +G+ IG V+LAKP
Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QTFMN SG+S+ ++ +YKI + ++VI+DD+D+ +R+ G G HNG K
Sbjct: 62 QTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMK 115
>sp|Q81J96|PTH_BACCR Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=pth PE=3 SV=2
Length = 186
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVK 115
>sp|Q73FF7|PTH_BACC1 Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 10987)
GN=pth PE=3 SV=2
Length = 186
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG K
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVK 115
>sp|A5I7R5|PTH_CLOBH Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=pth PE=3 SV=1
Length = 189
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIK 115
>sp|A7FPJ7|PTH_CLOB1 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=pth PE=3 SV=1
Length = 189
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIK 115
>sp|C4KZU9|PTH_EXISA Peptidyl-tRNA hydrolase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=pth PE=3 SV=1
Length = 185
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 76/112 (67%)
Query: 78 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQT 137
IVGLGNPGK++ TRHNVGF +D +AE GIS++ F A G G I V+L KP T
Sbjct: 4 IVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLT 63
Query: 138 FMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
+MN SG++V I+ YYKI + +LVI+DDLD+ K+R PKG GGHNG K
Sbjct: 64 YMNLSGEAVRPILDYYKIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIK 115
>sp|A9KR32|PTH_CLOPH Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1
Length = 191
Score = 123 bits (309), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 80/114 (70%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I+GLGNP ++Y TRHN+GF+ + +A+ IS+ + KA GKG IG V+LAKP
Sbjct: 2 YIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QT+MN SG+SV ++ +YK+ ++++VI+DD+ L ++R+ KG GGHNG K
Sbjct: 62 QTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIK 115
>sp|A7GJD4|PTH_CLOBL Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=pth PE=3 SV=1
Length = 189
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIK 115
>sp|C1FNE6|PTH_CLOBJ Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=pth PE=3 SV=1
Length = 189
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIK 115
>sp|B1IGZ7|PTH_CLOBK Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra /
Type B1) GN=pth PE=3 SV=1
Length = 189
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIK 115
>sp|C3KW96|PTH_CLOB6 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=pth PE=3 SV=1
Length = 189
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIK 115
>sp|C0ZHD7|PTH_BREBN Peptidyl-tRNA hydrolase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=pth PE=3 SV=1
Length = 189
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
+I+GLGNPGK+Y TRHN GF +D I++ GI V+ F+A G+G I V+L KPQ
Sbjct: 3 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++ +YK+ ++VI+DDLDLP +RL KG GGHNG K
Sbjct: 63 TYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIK 115
>sp|B1KTE2|PTH_CLOBM Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=pth PE=3 SV=1
Length = 189
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 79/114 (69%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD +AE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+SV ++YKI + ++VI+DD+ + K+R+ KG GGHNG K
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIK 115
>sp|C4Z4L5|PTH_EUBE2 Peptidyl-tRNA hydrolase OS=Eubacterium eligens (strain ATCC 27750 /
VPI C15-48) GN=pth PE=3 SV=1
Length = 186
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 73/114 (64%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPGK+Y GTRHN GF ++D +A+ ISV + K GKG I V+L KP
Sbjct: 2 YIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+ + ++ YYK + LVIFDD+ L K+RL KG GGHNG K
Sbjct: 62 MTYMNNSGECIREVMDYYKCDIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIK 115
>sp|Q0SQ66|PTH_CLOPS Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain SM101 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 78/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP
Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ V++YK+ +++V++DD+ L ++R+ KG GGHNG K
Sbjct: 63 TYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIK 115
>sp|Q6MJR3|PTH_BDEBA Peptidyl-tRNA hydrolase OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=pth PE=3 SV=1
Length = 187
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 78/114 (68%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLIVGLGNPG +Y TRHN+GF VD + E G FKA + I + PV+ KP
Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
QT+MN SG+SV ++ +YKIPL++++VI D++D PF++M++ GHGGHNG K
Sbjct: 62 QTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIK 115
>sp|Q8XHJ8|PTH_CLOPE Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain 13 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ + ++YK+ +++V++DD+ L ++R+ KG GGHNG K
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIK 115
>sp|Q0TMG7|PTH_CLOP1 Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1
Length = 188
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
T+MN SG+S+ + ++YK+ +++V++DD+ L ++R+ KG GGHNG K
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIK 115
>sp|A8F920|PTH_BACP2 Peptidyl-tRNA hydrolase OS=Bacillus pumilus (strain SAFR-032)
GN=pth PE=3 SV=1
Length = 188
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 74/111 (66%)
Query: 79 VGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTF 138
VGLGNPGK+Y TRHNVGF +D +++ I ++ F FG GF+ V+L KP T+
Sbjct: 5 VGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLTY 64
Query: 139 MNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
MN SG+ V ++ YY IPL+ + VI+DDLDLP ++RL KG GGHNG K
Sbjct: 65 MNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIK 115
>sp|B1I197|PTH_DESAP Peptidyl-tRNA hydrolase OS=Desulforudis audaxviator (strain MP104C)
GN=pth PE=3 SV=1
Length = 195
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 77/111 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG +Y TRHN GF +VD +A A G +V+ + G+G + V V+LAKPQ
Sbjct: 3 LIVGLGNPGAKYRFTRHNAGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 187
T+MN SG +V ++ +Y++ L +LVI DDLDL F ++RL PKGG GGH G
Sbjct: 63 TYMNLSGLAVSALCRHYRLELADLLVICDDLDLEFGRIRLRPKGGSGGHRG 113
>sp|Q839C0|PTH_ENTFA Peptidyl-tRNA hydrolase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=pth PE=3 SV=1
Length = 188
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 79/113 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
+IVGLGNPG +Y T+HN+GF +D IA + +S ++ NF+A + FIG V+L KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGYK 189
TFMN SG+SVG +++Y+ + + ++VI+DDLDL K+RL KG GGHNG K
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEIGKIRLRQKGSAGGHNGIK 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,944,849
Number of Sequences: 539616
Number of extensions: 2932851
Number of successful extensions: 8571
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7295
Number of HSP's gapped (non-prelim): 744
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)