BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029636
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46937|YAP1_HUMAN Yorkie homolog OS=Homo sapiens GN=YAP1 PE=1 SV=2
Length = 504
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 46 TEPAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLDLELNIS 105
T P +Q ++ PLP WE+ + Q G +YY N K+ SW P + + IS
Sbjct: 216 TSPPVQQNMMNSASGPLPDGWEQAM-TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRIS 274
Query: 106 SSS 108
S+
Sbjct: 275 QSA 277
>sp|Q5BIN5|PIN1_BOVIN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos
taurus GN=PIN1 PE=2 SV=1
Length = 163
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 59 KDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
++ LP WE+ + SGR+YYFN ++ W P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>sp|Q13526|PIN1_HUMAN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo
sapiens GN=PIN1 PE=1 SV=1
Length = 163
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 59 KDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
++ LP WE+ + SGR+YYFN ++ W P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>sp|P46938|YAP1_MOUSE Yorkie homolog OS=Mus musculus GN=Yap1 PE=1 SV=2
Length = 488
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 48 PAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLDLELNISSS 107
PA+ ++ PLP WE+ + Q G +YY N K+ SW P + + I+ S
Sbjct: 203 PAVPQTLMNSASGPLPDGWEQAM-TQDGEVYYINHKNKTTSWLDPRLDPRFAMNQRITQS 261
Query: 108 S 108
+
Sbjct: 262 A 262
>sp|Q2EJA0|YAP1_RAT Yorkie homolog OS=Rattus norvegicus GN=Yap1 PE=2 SV=1
Length = 469
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 48 PAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLDLELNISSS 107
PA+ ++ PLP WE+ + Q G +YY N K+ SW P + + I+ S
Sbjct: 200 PAVPQTLMNSASGPLPDGWEQAM-TQDGEVYYINHKNKTTSWLDPRLDPRFAMNQRITQS 258
Query: 108 S 108
+
Sbjct: 259 A 259
>sp|Q9QUR7|PIN1_MOUSE Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus
musculus GN=Pin1 PE=1 SV=1
Length = 165
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 59 KDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
++ LP WE+ + SGR+YYFN ++ W P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>sp|Q9UPV0|CE164_HUMAN Centrosomal protein of 164 kDa OS=Homo sapiens GN=CEP164 PE=1
SV=3
Length = 1460
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 58 IKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
I PLP +W+ C D+ +G +YYFN + + W P
Sbjct: 54 IVAPLPGEWKPCQDI-TGDIYYFNFANGQSMWDHP 87
>sp|Q8C863|ITCH_MOUSE E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2
Length = 864
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPE 93
PLP WE+ +D Q GR+YY + + +W PE
Sbjct: 288 PLPPGWEQRVD-QHGRVYYVDHVEKRTTWDRPE 319
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLD 99
PLP WE+ D +GR+Y+ N + W P ++ +L+
Sbjct: 400 PLPPGWEKRTD-SNGRVYFVNHNTRITQWEDPRSQGQLN 437
>sp|Q96J02|ITCH_HUMAN E3 ubiquitin-protein ligase Itchy homolog OS=Homo sapiens GN=ITCH
PE=1 SV=2
Length = 903
Score = 33.9 bits (76), Expect = 0.65, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPE 93
PLP WE+ +D Q GR+YY + + +W PE
Sbjct: 327 PLPPGWEQRVD-QHGRVYYVDHVEKRTTWDRPE 358
Score = 31.2 bits (69), Expect = 4.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLD 99
PLP WE+ D +GR+Y+ N + W P ++ +L+
Sbjct: 439 PLPPGWEKRTD-SNGRVYFVNHNTRITQWEDPRSQGQLN 476
>sp|P59114|PCIF1_MOUSE Phosphorylated CTD-interacting factor 1 OS=Mus musculus GN=Pcif1
PE=1 SV=1
Length = 706
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 65 DWERCLDLQSGRMYYFNRKSSKKSWSLP 92
WE+C + R YYFNR +++ W +P
Sbjct: 48 GWEKCWSRRESRPYYFNRFTNQSLWEMP 75
>sp|O15428|PINL_HUMAN Putative PIN1-like protein OS=Homo sapiens GN=PIN1P1 PE=5 SV=1
Length = 100
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 62 LPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
LP WE+ + SGR YYFN ++ W P
Sbjct: 7 LPPGWEKRMSRPSGRGYYFNHITNPSQWERP 37
>sp|Q9H4Z3|PCIF1_HUMAN Phosphorylated CTD-interacting factor 1 OS=Homo sapiens GN=PCIF1
PE=1 SV=1
Length = 704
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 65 DWERCLDLQSGRMYYFNRKSSKKSWSLP 92
WE+C + R YYFNR +++ W +P
Sbjct: 48 GWEKCWSRRENRPYYFNRFTNQSLWEMP 75
>sp|Q5DU05|CE164_MOUSE Centrosomal protein of 164 kDa OS=Mus musculus GN=Cep164 PE=2
SV=2
Length = 1446
Score = 33.5 bits (75), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 58 IKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
I+ PLP W+ C ++ +G +YYFN + + W P
Sbjct: 54 IEAPLPKGWKPCQNI-TGDLYYFNFDTGQSIWDHP 87
>sp|Q9Y0H4|SUDX_DROME E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster
GN=Su(dx) PE=1 SV=1
Length = 949
Score = 33.5 bits (75), Expect = 0.80, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 46 TEPAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
T+P +QT +PLP WE LD Q GR YY + + W P
Sbjct: 351 TDPQLQTQP--ADDEPLPAGWEIRLD-QYGRRYYVDHNTRSTYWEKP 394
>sp|P46934|NEDD4_HUMAN E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1
SV=4
Length = 1319
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
PLP WE D+ GR YY N +S + W P
Sbjct: 611 PLPPGWEERQDIL-GRTYYVNHESRRTQWKRP 641
>sp|A4IIJ3|KIBRA_XENTR Protein KIBRA OS=Xenopus tropicalis GN=wwc1 PE=2 SV=1
Length = 1108
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENK 95
PLP WE D+ G++YY + S SW P ++
Sbjct: 7 PLPEGWEEARDV-DGKVYYIDHTSKTTSWIDPRDR 40
>sp|Q6ZQ03|FNBP4_MOUSE Formin-binding protein 4 OS=Mus musculus GN=Fnbp4 PE=1 SV=2
Length = 1031
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 65 DWERCLDLQSGRMYYFNRKSSKKSWSLPE 93
DW+ D +G YY+N ++++ +W LP+
Sbjct: 223 DWQEVWDENTGCYYYWNTQTNEVTWELPQ 251
>sp|Q4R383|PIN1_MACFA Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca
fascicularis GN=PIN1 PE=2 SV=1
Length = 163
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 59 KDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
++ LP WE+ + S R+YYFN ++ W P
Sbjct: 4 EEKLPPGWEKRMSRSSDRVYYFNHITNASQWERP 37
>sp|Q9V3R6|ADAT1_DROME tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster
GN=adat PE=2 SV=1
Length = 394
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 7 ELSLAPTHCVVVDKSNSSSESEDNPSRKRKFLSDFSLLKTEPAIQTSVDLQIKDPLPLDW 66
E+S+ V K +S++ S+ + FL+ L+K P + D Q+ DP + +
Sbjct: 294 EISVNGKRQGVTKKKMKTSQAALAISKYKLFLTFLELVKFNPKLSEMFDQQLSDPERIAY 353
Query: 67 ERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLDL 100
C DL R Y F + K+ + L K+ +L
Sbjct: 354 ASCKDL--ARDYQFAWREIKEKYFLQWTKKPHEL 385
>sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3 OS=Homo sapiens
GN=BAG3 PE=1 SV=3
Length = 575
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 48 PAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
P +Q + +DPLP WE +D Q+G ++ + S +W+ P
Sbjct: 8 PMMQVASGNGDRDPLPPGWEIKIDPQTGWPFFVDHNSRTTTWNDP 52
>sp|Q8IWW6|RHG12_HUMAN Rho GTPase-activating protein 12 OS=Homo sapiens GN=ARHGAP12 PE=1
SV=1
Length = 846
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 48 PAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
P + S +QI +WE D SGR YY+NR + +++W P
Sbjct: 257 PPLPGSPAIQING----EWETHKD-SSGRCYYYNRGTQERTWKPP 296
>sp|Q8C0D4|RHG12_MOUSE Rho GTPase-activating protein 12 OS=Mus musculus GN=Arhgap12 PE=1
SV=2
Length = 838
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 44 LKTEPAIQTSVDLQIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
L PAIQ + + WE D SGR YY+NR + +++W P
Sbjct: 257 LPGSPAIQVNGE----------WETHKD-SSGRCYYYNRTTQERTWKPP 294
>sp|O00308|WWP2_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2
PE=1 SV=2
Length = 870
Score = 31.2 bits (69), Expect = 4.9, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 57 QIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
Q D LP WE+ +L +GR+YY + + +W P
Sbjct: 297 QAPDALPAGWEQ-RELPNGRVYYVDHNTKTTTWERP 331
Score = 30.4 bits (67), Expect = 7.4, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENK 95
PLP WE+ D +GR+YY N + W P +
Sbjct: 406 PLPPGWEKRQD--NGRVYYVNHNTRTTQWEDPRTQ 438
>sp|Q9JLV1|BAG3_MOUSE BAG family molecular chaperone regulator 3 OS=Mus musculus
GN=Bag3 PE=1 SV=2
Length = 577
Score = 30.8 bits (68), Expect = 5.2, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 59 KDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
+DPLP WE +D Q+G ++ + S +W+ P
Sbjct: 21 RDPLPPGWEIKIDPQTGWPFFVDHNSRTTTWNDP 54
>sp|Q9DBH0|WWP2_MOUSE NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2
PE=1 SV=1
Length = 870
Score = 30.8 bits (68), Expect = 5.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 57 QIKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
Q D LP WE+ +L +GR+YY + + +W P
Sbjct: 297 QAPDALPAGWEQ-RELPNGRVYYVDHNTKTTTWERP 331
Score = 30.0 bits (66), Expect = 8.4, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 61 PLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENK 95
PLP WE+ D +GR+YY N + W P +
Sbjct: 406 PLPPGWEKRQD--NGRVYYVNHNTRTTQWEDPRTQ 438
>sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1
SV=2
Length = 750
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 66 WERCLDLQSGRMYYFNRKSSKKSWSLPEN 94
WE+ LD SGR +Y N + KSW P
Sbjct: 219 WEQHLDPNSGRCFYINSLTGCKSWKPPRR 247
>sp|Q54T86|DWWA_DICDI WW domain-containing protein A OS=Dictyostelium discoideum GN=dwwA
PE=1 SV=1
Length = 568
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 62 LPLDWERCLDLQSGRMYYFNRKSSKKSWSLP 92
LP WE +D SG+++Y N + SW P
Sbjct: 327 LPDGWESRIDPVSGKVFYLNHNNKTTSWISP 357
>sp|B4M5X4|KIBRA_DROVI Protein kibra OS=Drosophila virilis GN=Kibra PE=3 SV=1
Length = 1276
Score = 30.4 bits (67), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 58 IKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLDLELNISSSSVSNCTSAAD 117
+ D LP+ WE D GR YY N + P + K ++ +S+ SAA
Sbjct: 88 VGDELPVGWEEAYDSNIGR-YYINHIAQSTQLEDPRQEWK-----SVQEQMLSDYLSAAQ 141
Query: 118 DDESNNK 124
D N +
Sbjct: 142 DQLENKR 148
>sp|B4K6I9|KIBRA_DROMO Protein kibra OS=Drosophila mojavensis GN=Kibra PE=3 SV=1
Length = 1264
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 58 IKDPLPLDWERCLDLQSGRMYYFNRKSSKKSWSLPENKQKLDLELNISSSSVSNCTSAAD 117
+ D LP+ WE D GR YY N + P + K ++ +S+ SAA
Sbjct: 80 VGDELPVGWEEAYDSNIGR-YYINHIAQTTQLEDPRQEWK-----SVQEQMLSDYLSAAQ 133
Query: 118 DDESNNK 124
D N +
Sbjct: 134 DQLENKR 140
>sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4 OS=Homo sapiens GN=FNBP4 PE=1 SV=3
Length = 1017
Score = 30.0 bits (66), Expect = 8.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 65 DWERCLDLQSGRMYYFNRKSSKKSWSLPE 93
DW+ D +G YY+N ++++ +W LP+
Sbjct: 219 DWQEVWDENTGCYYYWNTQTNEVTWELPQ 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.122 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,315,255
Number of Sequences: 539616
Number of extensions: 2274739
Number of successful extensions: 8048
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 7910
Number of HSP's gapped (non-prelim): 201
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)