Query 029638
Match_columns 190
No_of_seqs 191 out of 1115
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 16:07:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029638.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029638hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03014 carbonic anhydrase 100.0 1.6E-66 3.4E-71 467.4 15.7 188 1-189 1-203 (347)
2 PLN03019 carbonic anhydrase 100.0 1.3E-39 2.8E-44 291.8 13.0 166 19-189 28-198 (330)
3 PLN00416 carbonate dehydratase 100.0 4.6E-35 1E-39 254.9 11.2 121 66-187 1-121 (258)
4 PLN03006 carbonate dehydratase 100.0 1.1E-29 2.4E-34 225.8 8.6 104 83-186 48-153 (301)
5 KOG1578 Predicted carbonic anh 99.9 3.8E-26 8.3E-31 200.6 4.2 136 43-189 2-137 (276)
6 PRK15219 carbonic anhydrase; P 99.9 8.5E-24 1.9E-28 183.1 8.0 75 108-183 50-127 (245)
7 COG0288 CynT Carbonic anhydras 99.9 1.6E-23 3.5E-28 177.3 6.8 73 113-185 2-75 (207)
8 PRK10437 carbonic anhydrase; P 99.9 3.3E-23 7.2E-28 177.2 7.2 73 114-186 3-75 (220)
9 cd00883 beta_CA_cladeA Carboni 99.9 5.9E-23 1.3E-27 169.5 5.9 65 122-186 1-65 (182)
10 PLN02154 carbonic anhydrase 99.9 1.5E-22 3.3E-27 179.5 8.7 78 109-186 70-147 (290)
11 cd00884 beta_CA_cladeB Carboni 99.9 1.8E-22 3.9E-27 168.5 5.4 66 121-186 1-66 (190)
12 cd03378 beta_CA_cladeC Carboni 99.9 8.1E-22 1.8E-26 160.6 7.4 74 111-184 1-77 (154)
13 cd00382 beta_CA Carbonic anhyd 99.6 1.1E-16 2.3E-21 124.4 4.6 43 144-186 1-43 (119)
14 KOG1578 Predicted carbonic anh 94.6 0.0012 2.6E-08 59.2 -5.8 64 118-184 3-82 (276)
15 PF14618 DUF4452: Domain of un 54.0 11 0.00023 32.0 2.4 62 6-67 77-148 (165)
16 PF12778 PXPV: PXPV repeat (3 44.1 12 0.00027 22.0 0.9 18 41-58 4-21 (22)
17 PHA03187 UL14 tegument protein 34.4 53 0.0011 30.4 3.8 54 70-130 49-102 (322)
18 PHA03190 UL14 tegument protein 33.1 68 0.0015 27.9 4.1 54 70-130 49-102 (196)
19 PRK09778 putative antitoxin of 31.8 70 0.0015 25.0 3.6 43 12-67 6-50 (97)
20 PRK14066 exodeoxyribonuclease 31.0 86 0.0019 23.0 3.8 25 66-90 1-27 (75)
21 PF03580 Herpes_UL14: Herpesvi 30.9 84 0.0018 26.3 4.1 54 70-130 43-96 (149)
22 PHA03188 UL14 tegument protein 30.9 69 0.0015 27.9 3.8 54 70-130 53-106 (199)
23 PHA03191 UL14 tegument protein 26.1 99 0.0021 27.6 4.0 92 70-168 50-157 (238)
24 PHA03185 UL14 tegument protein 24.6 96 0.0021 27.3 3.6 54 70-130 49-102 (214)
25 PF08822 DUF1804: Protein of u 23.0 1.9E+02 0.004 24.5 4.9 55 68-124 105-159 (165)
26 PF01986 DUF123: Domain of unk 21.8 42 0.00091 25.9 0.8 17 148-165 81-97 (99)
27 KOG1120 Fe-S cluster biosynthe 21.3 77 0.0017 26.1 2.2 39 46-89 13-51 (134)
28 PF10226 DUF2216: Uncharacteri 20.9 2.6E+02 0.0056 24.4 5.4 24 63-86 10-33 (195)
29 PF14737 DUF4470: Domain of un 20.1 49 0.0011 24.5 0.8 24 142-165 21-44 (100)
No 1
>PLN03014 carbonic anhydrase
Probab=100.00 E-value=1.6e-66 Score=467.36 Aligned_cols=188 Identities=73% Similarity=1.091 Sum_probs=176.1
Q ss_pred CCcccccceeecccccccccccccCcCCc-eeEeeccCC------------CCCCCcccCCccccCCCCccCcchHHHHh
Q 029638 1 MSTASINNWCLTSVSQAQSSLIKSSTLRP-SIVARLNSP------------ASPPSLIRNEPVFAAPAPIINPNWREDMA 67 (190)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~~p~~~p~~~~~m~ 67 (190)
|||++||||||||++++++++++ .++|| ++||+|+++ ++||+||||+||||||+|||||+|+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~ 79 (347)
T PLN03014 1 MSTAPLSGFFLTSLSPSQSSLQK-LSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMG 79 (347)
T ss_pred CccccccceeccccCcccccccc-cccCCcceEEEeccccccccccCCCCCCCCchhhcCCccccCCCcccCchhHhhhc
Confidence 99999999999999999999977 78899 899999621 33899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCC--CCChHHHHHHHHHHHHHHHhhhccCChhhHHhhccCCC
Q 029638 68 NQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPS--DTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQS 145 (190)
Q Consensus 68 ~~s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~--~~tp~~al~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~ 145 (190)
++|||+||++|+|||+||++|+++|++||+++|+||+... ...+++++++|++||++|+++.+..++++|+++++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lerL~~GN~rF~~~~~~~~~~~~~~La~GQ~ 159 (347)
T PLN03014 80 TEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQS 159 (347)
T ss_pred hhhHHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCCCCCCcCHHHHHHHHHHHHHhhccccCHHHHHhhccCCC
Confidence 9999999999999999999999999999999999998632 25679999999999999999999999999999999999
Q ss_pred CeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCCCCC
Q 029638 146 PKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQVTI 189 (190)
Q Consensus 146 P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~~~~ 189 (190)
|+++||+||||||+|+.|||++|||+|||||+||+|+++|..+|
T Consensus 160 P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~ 203 (347)
T PLN03014 160 PKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKY 203 (347)
T ss_pred CCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCccccccc
Confidence 99999999999999999999999999999999999999986544
No 2
>PLN03019 carbonic anhydrase
Probab=100.00 E-value=1.3e-39 Score=291.85 Aligned_cols=166 Identities=63% Similarity=0.872 Sum_probs=134.0
Q ss_pred ccccccCcCCceeEeeccCCCCCC---CcccCCccccCCCCccCcchHHHHhhhhHHHHHHHHHHHhhhhcCchhHHhHh
Q 029638 19 SSLIKSSTLRPSIVARLNSPASPP---SLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAK 95 (190)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~p~~~~~m~~~s~~~ai~~l~~ll~~k~~L~~~Aa~k 95 (190)
-+.|- ++|||+---.|- --+| +-..|-+.+. ++ -..+.-.++|+++|||+||++|+|||+||++|+++|++|
T Consensus 28 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 102 (330)
T PLN03019 28 KQYKY-PSLRPSHRLSLL--FLFPFHLSANGACFRCT-CF-SHFKLELRRMGNESYEDAIEALKKLLIEKDDLKDVAAAK 102 (330)
T ss_pred hhccC-CCcCccceeeee--hhhhhhHhhccccceee-cc-ccCchhhHHHhhhhHHHHHHHHHhhcccccccchHHHHH
Confidence 33344 889997543322 1122 2233444443 22 112222356899999999999999999999999999999
Q ss_pred hHHHHHhhCCCC--CCChHHHHHHHHHHHHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEE
Q 029638 96 VEQITAQLQTPS--DTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFV 173 (190)
Q Consensus 96 i~~~taeL~~~~--~~tp~~al~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFV 173 (190)
|+++|+||++.. ...+++++++|++||++|+.+.+..++++|.++++||+|+++||+||||||+|+.|||++|||+||
T Consensus 103 ~~~~~~~l~~~~~~~~~~~~ale~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFV 182 (330)
T PLN03019 103 VKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFV 182 (330)
T ss_pred HHHhhHHhhhccCCCCchhHHHHHHHHHHHHHHhccccccHHHHHhhccCCCCCEEEEEecccCCCHHHHhCCCCCceEE
Confidence 999999998632 356899999999999999999998999999999999999999999999999999999999999999
Q ss_pred eeecCccCCCCCCCCC
Q 029638 174 VRNVANIVPPYDQVTI 189 (190)
Q Consensus 174 vRNIGN~V~p~D~~~~ 189 (190)
||||||+|+++|..+|
T Consensus 183 vRNaGNiV~p~d~~~~ 198 (330)
T PLN03019 183 VRNIANMVPPFDKVKY 198 (330)
T ss_pred EeccccccCCcccccc
Confidence 9999999999987544
No 3
>PLN00416 carbonate dehydratase
Probab=100.00 E-value=4.6e-35 Score=254.95 Aligned_cols=121 Identities=61% Similarity=1.004 Sum_probs=116.4
Q ss_pred HhhhhHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhccCChhhHHhhccCCC
Q 029638 66 MANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQS 145 (190)
Q Consensus 66 m~~~s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~ 145 (190)
||.+||+++|.+|.+||+.++.+++++++++..++++|++.. .+|.+++++|++||+||+++.+..++++|+.++.||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~al~~Ll~Gn~rF~~~~~~~~~~~~~~la~gQ~ 79 (258)
T PLN00416 1 MATESYEAAIKGLNDLLSTKADLGNVAAAKIKALTAELKELD-SSNSDAIERIKTGFTQFKTEKYLKNSTLFNHLAKTQT 79 (258)
T ss_pred CCcccHHHHHHHHHhhcccccccchHHHHhHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHhcccccCHHHHHhhccCCC
Confidence 789999999999999999999999999999999999999884 7899999999999999999998888999999999999
Q ss_pred CeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCCC
Q 029638 146 PKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQV 187 (190)
Q Consensus 146 P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~~ 187 (190)
|+++|||||||||+|+.|||++|||+|||||+||+|+++|..
T Consensus 80 P~alvI~CsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~ 121 (258)
T PLN00416 80 PKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPFDQK 121 (258)
T ss_pred CCEEEEEecCCCCCHHHHcCCCCCCEEEEeccccccCCcccc
Confidence 999999999999999999999999999999999999998864
No 4
>PLN03006 carbonate dehydratase
Probab=99.96 E-value=1.1e-29 Score=225.78 Aligned_cols=104 Identities=42% Similarity=0.792 Sum_probs=96.4
Q ss_pred hhhcCchhHHhHhhHHHHHhhCCCC--CCChHHHHHHHHHHHHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCc
Q 029638 83 KEKEDLKPVAAAKVEQITAQLQTPS--DTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCP 160 (190)
Q Consensus 83 ~~k~~L~~~Aa~ki~~~taeL~~~~--~~tp~~al~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~P 160 (190)
++..+|+.+|++|++++|+||++.. ...+++++++|++||.+|+...+..++++|+++++||+|+++||+||||||+|
T Consensus 48 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~rf~~f~~~~~~~~~~~~~~La~GQ~P~~lvI~CsDSRV~P 127 (301)
T PLN03006 48 RKATNLQVMASGKTPGLTQEANGVAIDRQNNTDVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVIACADSRVCP 127 (301)
T ss_pred ccccchhhhhhhchHHHHHHHhhccCCCCCcccHHHHHHHHHHhchhhccccCHHHHHHhccCCCCCEEEEEeccCCCCH
Confidence 3456888999999999999998654 23579999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCceEEeeecCccCCCCCC
Q 029638 161 SHVLDFQPGEAFVVRNVANIVPPYDQ 186 (190)
Q Consensus 161 e~Ifg~~pGDlFVvRNIGN~V~p~D~ 186 (190)
+.|||++|||+||||||||+|+++|.
T Consensus 128 e~Ifd~~pGDlFVVRNaGNiVpp~d~ 153 (301)
T PLN03006 128 SAVLGFQPGDAFTVRNIANLVPPYES 153 (301)
T ss_pred HHHhCCCCCCEEEEeccccccCCccc
Confidence 99999999999999999999999985
No 5
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=99.92 E-value=3.8e-26 Score=200.62 Aligned_cols=136 Identities=37% Similarity=0.555 Sum_probs=130.0
Q ss_pred CcccCCccccCCCCccCcchHHHHhhhhHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHH
Q 029638 43 SLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGF 122 (190)
Q Consensus 43 ~~~~~~~~~~~~~p~~~p~~~~~m~~~s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN 122 (190)
.|+|+.+.|+.+.+.+.+.+.+||...+|+.++..+.++|..+-++ ++++++.++|++ .+.++++++||
T Consensus 2 ~i~~~~~~~~~t~~~~~~~~~~~mp~~~~~~~~~~dsrml~~r~~~--~~~~~~~~~~~~---------~~~~~~i~~~F 70 (276)
T KOG1578|consen 2 EILRGVIRFRNTTRKDLVEEIRDMPSPTAVMFTCMDSRMLPTRYNL--VAAAKIKKLTAE---------FDTLEDIGDMF 70 (276)
T ss_pred ccccccchhhhhhHHHhHHHHHhCCCHHHHHHHHHHhhccchhhhh--hhhhhhhhhhhc---------cchHHHHHhhH
Confidence 3889999999999999999899999999999999999999999999 899999999993 57899999999
Q ss_pred HHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCCCCC
Q 029638 123 IHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQVTI 189 (190)
Q Consensus 123 ~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~~~~ 189 (190)
..|..+++..+|.+|..++++|+|+++||+|+||||+|++|++++|||+|+|||++|+|+|.|+.++
T Consensus 71 v~~~~~~~~~~p~~f~~~~~~qsp~~l~i~csdsRv~~shIL~~~pge~f~irniaNlv~p~~~~~~ 137 (276)
T KOG1578|consen 71 VVRNSGNYIPNPTLFGALAKSQSPEPLALECSDSRVCISHILVCGPGECFAIRNIANLVPPPDKSKP 137 (276)
T ss_pred hhhccccCCCChhhhHHHhccCCCcceEEEeccccCCCceEEEecCchHhHHHHHHhccCcccccCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998775
No 6
>PRK15219 carbonic anhydrase; Provisional
Probab=99.89 E-value=8.5e-24 Score=183.15 Aligned_cols=75 Identities=28% Similarity=0.377 Sum_probs=66.8
Q ss_pred CCChHHHHHHHHHHHHHHHhhhccCChhhH---HhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCC
Q 029638 108 DTKAFDSVERIKEGFIHFKREKYEKNPALY---SELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPP 183 (190)
Q Consensus 108 ~~tp~~al~~Ll~GN~rF~~~~~~~~p~~~---~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p 183 (190)
..+|.+++++|++||++|+++.+. +++++ .++++||+|+++||+||||||+||.|||++|||+||+||+||+|++
T Consensus 50 ~~~p~~al~~L~~GN~rF~~~~~~-~~~~~~~~~~la~gQ~P~a~vi~CsDSRV~pe~ifd~~~GdlFvvRnaGN~v~~ 127 (245)
T PRK15219 50 KMTPDQIIESLKQGNKRFRSGKPA-QHDYLAQKRASAAGQYPAAVILSCIDSRAPAEIILDTGIGETFNSRVAGNISND 127 (245)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcC-CchhhHHhhhhccCCCCeEEEEecccCCCCHHHHhCCCCCcEEEEeccccccCc
Confidence 378999999999999999999865 33333 3467999999999999999999999999999999999999999975
No 7
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=99.89 E-value=1.6e-23 Score=177.27 Aligned_cols=73 Identities=41% Similarity=0.720 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHhhhccCChhhHHhhc-cCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCC
Q 029638 113 DSVERIKEGFIHFKREKYEKNPALYSELA-KGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYD 185 (190)
Q Consensus 113 ~al~~Ll~GN~rF~~~~~~~~p~~~~~La-~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D 185 (190)
..++.|++||++|.++.+..++++|+.+. .||+|+++|||||||||+||.|||.+|||+||+||+||+|+++|
T Consensus 2 ~~~~~ll~gn~~f~~~~~~~~~~~~~~l~~~~Q~P~~lii~C~DSRv~~e~i~~~~pGdlfV~RNaGniV~~~~ 75 (207)
T COG0288 2 SALKDLLAGNQRFAEGKFPEQSALFRKLADKGQSPKALIITCSDSRVPPELITGLGPGDLFVIRNAGNIVTHPD 75 (207)
T ss_pred cHHHHHHHHHHHHHhcccccchHHHHHHhccCCCCcEEEEEEccCCCCHHHHhCCCCccEEEEeecccccCCCc
Confidence 46899999999999999888899999876 66999999999999999999999999999999999999999875
No 8
>PRK10437 carbonic anhydrase; Provisional
Probab=99.88 E-value=3.3e-23 Score=177.17 Aligned_cols=73 Identities=33% Similarity=0.606 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCC
Q 029638 114 SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQ 186 (190)
Q Consensus 114 al~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~ 186 (190)
.+++|++||++|++..+..++++|++++.||+|+++|||||||||+|+.|||.+|||+||+||+||+|+++|.
T Consensus 3 ~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~~q~p~~~~i~C~DSRv~p~~i~~~~~Gd~fv~Rn~gn~v~~~~~ 75 (220)
T PRK10437 3 DIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDL 75 (220)
T ss_pred hHHHHHHHHHHHHHhhhccChHHHHhcccCCCCCEEEEEecccCCCHHHhcCCCCCcEEEEeecccccCCCCc
Confidence 4789999999999998888999999999999999999999999999999999999999999999999998763
No 9
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.87 E-value=5.9e-23 Score=169.53 Aligned_cols=65 Identities=46% Similarity=0.790 Sum_probs=62.3
Q ss_pred HHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCC
Q 029638 122 FIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQ 186 (190)
Q Consensus 122 N~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~ 186 (190)
|++|+++.+..++++|++++.||+|+++|||||||||+|+.|||++|||+||+||+||+|+++|.
T Consensus 1 n~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~CsDSRv~pe~if~~~~GdlFViRnaGN~v~~~~~ 65 (182)
T cd00883 1 NRAWAEEKKAKDPDFFPRLAKGQTPEYLWIGCSDSRVPENTILGLLPGEVFVHRNIANLVSPTDL 65 (182)
T ss_pred ChhhhhhccccCHHHHHHhhcCCCCCEEEEEecCCCCCHHHhcCCCCCCEEEEEeeccccCCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999998864
No 10
>PLN02154 carbonic anhydrase
Probab=99.87 E-value=1.5e-22 Score=179.49 Aligned_cols=78 Identities=50% Similarity=0.892 Sum_probs=73.5
Q ss_pred CChHHHHHHHHHHHHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCC
Q 029638 109 TKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQ 186 (190)
Q Consensus 109 ~tp~~al~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~ 186 (190)
.+..+.+++|++||.+|+.+.+..++++|+.++.||+|+++||+||||||+|+.|||++|||+||+||+||+|++++.
T Consensus 70 ~~~~~~l~~Ll~gf~~f~~~~~~~~~e~f~~La~GQ~P~~lvi~C~DSRV~pe~if~~~pGdlFvvRN~GNiv~~~~~ 147 (290)
T PLN02154 70 ETSYDFLDEMRHRFLKFKRQKYLPEIEKFKALAIAQSPKVMVIGCADSRVCPSYVLGFQPGEAFTIRNVANLVTPVQN 147 (290)
T ss_pred chhHHHHHHHHHHHHHHhhccccccHHHHHHhccCCCCCEEEEEecCCCCCHHHHcCCCCCCEEEEeccCCccCCccC
Confidence 345678999999999999999999999999999999999999999999999999999999999999999999999863
No 11
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.86 E-value=1.8e-22 Score=168.52 Aligned_cols=66 Identities=55% Similarity=0.984 Sum_probs=63.1
Q ss_pred HHHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCC
Q 029638 121 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQ 186 (190)
Q Consensus 121 GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~ 186 (190)
||++|++..+..++++|+++++||+|+++|||||||||+|+.|||.+|||+||+||+||+|++++.
T Consensus 1 G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~~i~C~DsRv~~~~i~~~~~Gd~fv~Rn~gn~v~~~~~ 66 (190)
T cd00884 1 GFRRFRKEYFPEERELFEKLAKGQSPKALFIACSDSRVVPALITQTQPGELFVVRNVGNLVPPYEP 66 (190)
T ss_pred ChHHHHhhhhhhhHHHHHHhccCCCCCeEEEeeeCCCCCHHHHcCCCCCCEEEEeccCCcCCcccc
Confidence 799999998888999999999999999999999999999999999999999999999999999864
No 12
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.85 E-value=8.1e-22 Score=160.56 Aligned_cols=74 Identities=42% Similarity=0.547 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHHHHHhhhccC---ChhhHHhhccCCCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCC
Q 029638 111 AFDSVERIKEGFIHFKREKYEK---NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 184 (190)
Q Consensus 111 p~~al~~Ll~GN~rF~~~~~~~---~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~ 184 (190)
|++++++|++||++|.++.... +++.|.++++||+|+++||+||||||+|+.|||.+|||+||+||+||+|++.
T Consensus 1 p~~~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fviRn~gn~v~~~ 77 (154)
T cd03378 1 PDEALERLKEGNKRFVSGKPLHPDQDLARRRELAKGQKPFAVILSCSDSRVPPEIIFDQGLGDLFVVRVAGNIVDDD 77 (154)
T ss_pred ChHHHHHHHHHHHHHHhcCccCccccHHHHHHhccCCCCcEEEEEcCCCCCCHHHHcCCCCCCEEEEeccccccChh
Confidence 5688999999999999875431 2567889999999999999999999999999999999999999999999863
No 13
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.65 E-value=1.1e-16 Score=124.41 Aligned_cols=43 Identities=53% Similarity=1.016 Sum_probs=41.1
Q ss_pred CCCeEEEEeecCCCCCcccccCCCCCceEEeeecCccCCCCCC
Q 029638 144 QSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQ 186 (190)
Q Consensus 144 Q~P~alvI~CSDSRV~Pe~Ifg~~pGDlFVvRNIGN~V~p~D~ 186 (190)
|+|+++||+|||||++|+.+||.+|||+||+||+||+|+++|.
T Consensus 1 q~p~~~vltC~DsRv~~~~~~~~~~Gd~fv~Rn~Gn~v~~~~~ 43 (119)
T cd00382 1 QKPKALIIGCSDSRVPPELIFGLGPGDLFVVRNAGNLVPPYDL 43 (119)
T ss_pred CCCeEEEEEeeCCCCCHHHHhCCCCCCEEEEeccCCcCCCCcc
Confidence 7999999999999999999999999999999999999998654
No 14
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=94.56 E-value=0.0012 Score=59.21 Aligned_cols=64 Identities=34% Similarity=0.560 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhhccCChhhHHhhccCCCCeEEEEeecCCCCCcccc----------------cCCCCCceEEeeecCccC
Q 029638 118 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHV----------------LDFQPGEAFVVRNVANIV 181 (190)
Q Consensus 118 Ll~GN~rF~~~~~~~~p~~~~~La~gQ~P~alvI~CSDSRV~Pe~I----------------fg~~pGDlFVvRNIGN~V 181 (190)
|+.|..+|+...... +-+++.+-++|.+..++|+|||.-|..- +....||.||+||.||..
T Consensus 3 i~~~~~~~~~t~~~~---~~~~~~~mp~~~~~~~~~~dsrml~~r~~~~~~~~~~~~~~~~~~~~~i~~~Fv~~~~~~~~ 79 (276)
T KOG1578|consen 3 ILRGVIRFRNTTRKD---LVEEIRDMPSPTAVMFTCMDSRMLPTRYNLVAAAKIKKLTAEFDTLEDIGDMFVVRNSGNYI 79 (276)
T ss_pred cccccchhhhhhHHH---hHHHHHhCCCHHHHHHHHHHhhccchhhhhhhhhhhhhhhhccchHHHHHhhHhhhccccCC
Confidence 667788888876532 2356777789999999999999999877 678899999999999998
Q ss_pred CCC
Q 029638 182 PPY 184 (190)
Q Consensus 182 ~p~ 184 (190)
+.-
T Consensus 80 ~~p 82 (276)
T KOG1578|consen 80 PNP 82 (276)
T ss_pred CCh
Confidence 863
No 15
>PF14618 DUF4452: Domain of unknown function (DUF4452)
Probab=53.95 E-value=11 Score=31.99 Aligned_cols=62 Identities=26% Similarity=0.293 Sum_probs=35.1
Q ss_pred ccceeecccccccccccccCcCCceeEeeccCC-CCCCCc------ccC---CccccCCCCccCcchHHHHh
Q 029638 6 INNWCLTSVSQAQSSLIKSSTLRPSIVARLNSP-ASPPSL------IRN---EPVFAAPAPIINPNWREDMA 67 (190)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~---~~~~~~~~p~~~p~~~~~m~ 67 (190)
-|...|+|.||.++.+.--....|.+.-.-.++ ..+|.. --- -+..+++.|||+|.+++.|+
T Consensus 77 s~rsSlsS~SP~~SP~q~~~~~~~~~sl~~~s~~~~~p~~~~~~~~klhqpsa~R~RnaIpIVNP~Tgm~vs 148 (165)
T PF14618_consen 77 SNRSSLSSNSPSSSPTQHQIQPTPSFSLSSASPPFQPPRYTQQNNLKLHQPSAPRTRNAIPIVNPSTGMRVS 148 (165)
T ss_pred cCccccccCCCCCCccccccccCCCcccCCCCCCcCCCcccccccccccCCccccccCccceeCCCCCCccC
Confidence 344678888888777663233333333222221 113333 111 23456899999999987776
No 16
>PF12778 PXPV: PXPV repeat (3 copies)
Probab=44.09 E-value=12 Score=21.95 Aligned_cols=18 Identities=39% Similarity=0.872 Sum_probs=13.0
Q ss_pred CCCcccCCccccCCCCcc
Q 029638 41 PPSLIRNEPVFAAPAPII 58 (190)
Q Consensus 41 ~~~~~~~~~~~~~~~p~~ 58 (190)
.|..++-+||..||+|.+
T Consensus 4 ~PVy~~PaPVyvaP~P~~ 21 (22)
T PF12778_consen 4 APVYVAPAPVYVAPAPVY 21 (22)
T ss_pred CCEEeccCceeecCCCcc
Confidence 566677778888887754
No 17
>PHA03187 UL14 tegument protein; Provisional
Probab=34.44 E-value=53 Score=30.40 Aligned_cols=54 Identities=13% Similarity=0.247 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 029638 70 SYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKY 130 (190)
Q Consensus 70 s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~ 130 (190)
|.-+|...|+..|+-..-+.. +-.|+..+....+++ ..++.+|++|+||-.-.+
T Consensus 49 SAKeA~~dl~rqLRS~aRvea-VeQKar~Iq~rVEeQ------~a~r~iL~~nRRfL~PdF 102 (322)
T PHA03187 49 SAKEASLDLDRYMQAHSRVGR-VEQNARALAQRVEAQ------AAVGEILDRHRRFLHPDF 102 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH------HHHHHHHHHhhhhcChHH
Confidence 467888899999977766654 555666665555543 678999999999865543
No 18
>PHA03190 UL14 tegument protein; Provisional
Probab=33.13 E-value=68 Score=27.92 Aligned_cols=54 Identities=13% Similarity=0.230 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 029638 70 SYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKY 130 (190)
Q Consensus 70 s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~ 130 (190)
|.-+|...++..|+-..-|.. +-.|+..+.....++ .+++.+|++|+||-...+
T Consensus 49 sAKeA~~~~~~~lrS~aRle~-vrQk~~~Iq~rVE~Q------~a~r~~L~~nRRyL~PdF 102 (196)
T PHA03190 49 KAREHEAAAEIAAQSDKRLSS-VRCHIARIKAATEGQ------RALALELDGYRRYLRNDF 102 (196)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH------HHHHHHHHHhHhhcChHH
Confidence 466777788888766655554 555566555555543 679999999999976654
No 19
>PRK09778 putative antitoxin of the YafO-YafN toxin-antitoxin system; Provisional
Probab=31.75 E-value=70 Score=25.02 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=23.2
Q ss_pred cccccccccccccCc--CCceeEeeccCCCCCCCcccCCccccCCCCccCcchHHHHh
Q 029638 12 TSVSQAQSSLIKSST--LRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMA 67 (190)
Q Consensus 12 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~m~ 67 (190)
+..+.+-|-+||.+. +..--+| -|=+|+|.|- ++.|.+-|.|.
T Consensus 6 A~~taSISELKKNP~~~~~g~PVA---------ILNhN~PafY----~Vpa~~yE~m~ 50 (97)
T PRK09778 6 AEKSVNITELRKNPAKYFIDQPVA---------VLSNNRPAGY----LLSASAFEALM 50 (97)
T ss_pred hhhhccHHHHhhCHHHHhcCCceE---------EecCCceeEE----EeCHHHHHHHH
Confidence 334445577888543 3322233 3448999886 34454434444
No 20
>PRK14066 exodeoxyribonuclease VII small subunit; Provisional
Probab=30.95 E-value=86 Score=22.96 Aligned_cols=25 Identities=32% Similarity=0.538 Sum_probs=17.2
Q ss_pred HhhhhHHHHHHHHHHHhh--hhcCchh
Q 029638 66 MANQSYEEAIEALKKLLK--EKEDLKP 90 (190)
Q Consensus 66 m~~~s~~~ai~~l~~ll~--~k~~L~~ 90 (190)
|...+||+|+++|..++. |+++|..
T Consensus 1 m~~~~fEeal~~LE~IV~~LE~g~l~L 27 (75)
T PRK14066 1 MAVEKFETALKKLEEVVKKLEGGELSL 27 (75)
T ss_pred CccccHHHHHHHHHHHHHHHHCCCCCH
Confidence 567789999998877763 3444443
No 21
>PF03580 Herpes_UL14: Herpesvirus UL14-like protein; InterPro: IPR005207 This is a family of Herpesvirus proteins including UL14. UL14 protein is a minor component of the virion tegument [] and is expressed late in infection. UL14 protein can influence the intracellular localization patterns of a number of proteins belonging to the capsid or the DNA encapsidation machinery [].
Probab=30.93 E-value=84 Score=26.25 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 029638 70 SYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKY 130 (190)
Q Consensus 70 s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~ 130 (190)
|.-+|...++..|+-..-|.. +-.|+..+.....++ .++..++++|+||-...+
T Consensus 43 sAK~a~~~~~~~lrs~aRle~-vrqk~~~I~~rVe~Q------~a~r~~L~~~RRyL~pdf 96 (149)
T PF03580_consen 43 SAKEAHRDLERQLRSNARLES-VRQKARAIQARVEEQ------AARRDFLDANRRYLSPDF 96 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH------HHHHHHHHHhHHhcChHH
Confidence 467888889988877766655 555666655555544 679999999999976655
No 22
>PHA03188 UL14 tegument protein; Provisional
Probab=30.90 E-value=69 Score=27.92 Aligned_cols=54 Identities=11% Similarity=0.283 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 029638 70 SYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKY 130 (190)
Q Consensus 70 s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~ 130 (190)
|.-+|...|+..|+-..-+.. +-.|+..+.....++ ..++.++++|+||-...+
T Consensus 53 sAK~A~~dl~rqLrs~aRve~-veQK~r~Iq~rVeeQ------~a~r~iL~~nRRfL~PdF 106 (199)
T PHA03188 53 AAKDACADLNNNIRSAARIAA-VEQKIADIQEKVEEQ------TSIQKILNANRRYIAPDF 106 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH------HHHHHHHHHhhhhcChHH
Confidence 466788889988877665554 555666665555543 679999999999966654
No 23
>PHA03191 UL14 tegument protein; Provisional
Probab=26.12 E-value=99 Score=27.63 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhccCCh-----------hhHH
Q 029638 70 SYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNP-----------ALYS 138 (190)
Q Consensus 70 s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~~~~p-----------~~~~ 138 (190)
|.-+|...|+..|+-..-+.. .-.|+..+-...+ ...+++.+|++|+||-...+.... +...
T Consensus 50 SAK~A~~dl~~qLRSnaRve~-VeQkar~Iq~rVE------eQ~a~r~iLd~hRRfL~pdf~e~lD~~ED~i~dkEd~L~ 122 (238)
T PHA03191 50 SARNAHSDYKAQLRSNMRLEN-TERKLRIIQRHID------EQVDRRLILDTNRRFLNPELQSQLDQAEEDILDKEDILT 122 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH------HHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 477889999999987766554 3333333322222 346799999999999776553211 1222
Q ss_pred hhc-----cCCCCeEEEEeecCCCCCcccccCCCC
Q 029638 139 ELA-----KGQSPKYMVFACSDSRVCPSHVLDFQP 168 (190)
Q Consensus 139 ~La-----~gQ~P~alvI~CSDSRV~Pe~Ifg~~p 168 (190)
+.+ .+-.+..-|++|-|.-.-.-.+|...|
T Consensus 123 da~~di~l~~~~~~~~wLdeedEALLtkW~Le~aP 157 (238)
T PHA03191 123 QACDDITLADSSEDIEELDEEAEALLTKWILEQKP 157 (238)
T ss_pred HHHhccccCCCCCCcccccchHHHHHHHHHHhcCC
Confidence 221 244577778888887555444444433
No 24
>PHA03185 UL14 tegument protein; Provisional
Probab=24.65 E-value=96 Score=27.31 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 029638 70 SYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKY 130 (190)
Q Consensus 70 s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~rF~~~~~ 130 (190)
|.-+|...|+..|.-..-+.. .-.|+..+....++ +.++..+|++|+||-...+
T Consensus 49 sAK~A~~dl~aqLrS~aRve~-VeQKar~Iq~rVEe------Q~a~r~iL~~hRRyL~pdf 102 (214)
T PHA03185 49 AAKAAHRELEARLKSRARLEM-LRQHAACVKIRVEE------QAERRDFLIAHRRYLDPAL 102 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------HHHHHHHHHHHHHhcChHH
Confidence 366788888888876654433 33444444444333 4679999999999966654
No 25
>PF08822 DUF1804: Protein of unknown function (DUF1804); InterPro: IPR014926 This entry is represented by Bacteriophage D3112, Orf24. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=23.00 E-value=1.9e+02 Score=24.50 Aligned_cols=55 Identities=24% Similarity=0.294 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHHHHhhhhcCchhHHhHhhHHHHHhhCCCCCCChHHHHHHHHHHHHH
Q 029638 68 NQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIH 124 (190)
Q Consensus 68 ~~s~~~ai~~l~~ll~~k~~L~~~Aa~ki~~~taeL~~~~~~tp~~al~~Ll~GN~r 124 (190)
.+||..++.+-|++|=|..+|.- |...++.+..-+++.. .....+|-++++.|..
T Consensus 105 aDsf~K~vaaskr~lPets~Lav-A~~vl~~l~~fv~e~~-P~h~~af~eiLepFg~ 159 (165)
T PF08822_consen 105 ADSFSKMVAASKRVLPETSELAV-AMEVLELLAAFVQERY-PQHLAAFLEILEPFGE 159 (165)
T ss_pred HHHHHHHHHHHhhcCchHHHHHH-HHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 35566666666666655555543 5555555555555442 3344455555555544
No 26
>PF01986 DUF123: Domain of unknown function DUF123; InterPro: IPR002837 This archaebacterial domain has no known function. In Methanocaldococcus jannaschii (Methanococcus jannaschii) it occurs with an endonuclease domain IPR003265 from INTERPRO.
Probab=21.84 E-value=42 Score=25.93 Aligned_cols=17 Identities=41% Similarity=0.655 Sum_probs=13.6
Q ss_pred EEEEeecCCCCCcccccC
Q 029638 148 YMVFACSDSRVCPSHVLD 165 (190)
Q Consensus 148 alvI~CSDSRV~Pe~Ifg 165 (190)
+--+||||.+ +++++|-
T Consensus 81 i~gFGaSDc~-c~SHLf~ 97 (99)
T PF01986_consen 81 IPGFGASDCR-CKSHLFY 97 (99)
T ss_pred CCCCCCcCCC-CCcceEE
Confidence 7778999999 6677763
No 27
>KOG1120 consensus Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain) [Inorganic ion transport and metabolism]
Probab=21.26 E-value=77 Score=26.10 Aligned_cols=39 Identities=23% Similarity=0.127 Sum_probs=25.2
Q ss_pred cCCccccCCCCccCcchHHHHhhhhHHHHHHHHHHHhhhhcCch
Q 029638 46 RNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLK 89 (190)
Q Consensus 46 ~~~~~~~~~~p~~~p~~~~~m~~~s~~~ai~~l~~ll~~k~~L~ 89 (190)
++.++++++++.-.+... .=.+.|+..|++||.++.+..
T Consensus 13 ~~~~~~a~~~~~~~k~~l-----tLTp~Av~~ik~ll~~~~e~~ 51 (134)
T KOG1120|consen 13 RNARAPAARKLAPRKAAL-----TLTPSAVNHIKQLLSDKPEDV 51 (134)
T ss_pred cccccccccccccccccc-----ccCHHHHHHHHHHHHhCCcCc
Confidence 355666666655444321 115678999999999877654
No 28
>PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain. Some annotation suggests it might be PKR, the Hepatitis delta antigen-interacting protein A, but this could not be confirmed.
Probab=20.92 E-value=2.6e+02 Score=24.42 Aligned_cols=24 Identities=29% Similarity=0.335 Sum_probs=18.4
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhc
Q 029638 63 REDMANQSYEEAIEALKKLLKEKE 86 (190)
Q Consensus 63 ~~~m~~~s~~~ai~~l~~ll~~k~ 86 (190)
-|||..-|.||-|.+|++.=.||-
T Consensus 10 Deell~~skeel~~rLR~~E~ek~ 33 (195)
T PF10226_consen 10 DEELLRWSKEELVRRLRRAEAEKM 33 (195)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHH
Confidence 478888999999998876655543
No 29
>PF14737 DUF4470: Domain of unknown function (DUF4470)
Probab=20.08 E-value=49 Score=24.54 Aligned_cols=24 Identities=13% Similarity=0.313 Sum_probs=17.1
Q ss_pred cCCCCeEEEEeecCCCCCcccccC
Q 029638 142 KGQSPKYMVFACSDSRVCPSHVLD 165 (190)
Q Consensus 142 ~gQ~P~alvI~CSDSRV~Pe~Ifg 165 (190)
..+.-.++++||.|.|=--..+..
T Consensus 21 ~~~~~~iLl~G~gD~Rhvl~Tl~~ 44 (100)
T PF14737_consen 21 PDEDLNILLLGCGDLRHVLKTLAS 44 (100)
T ss_pred CCCCceEEEecCccHHHHHHHHHh
Confidence 445678999999999954444443
Done!