Your job contains 1 sequence.
>029640
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV
IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT
IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDG
IMKLIGELGG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029640
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 815 3.2e-81 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 801 9.7e-80 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 785 4.8e-78 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 575 8.6e-56 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 540 3.7e-54 2
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 559 4.3e-54 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 559 4.3e-54 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 558 5.5e-54 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 558 5.5e-54 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 558 5.5e-54 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 558 5.5e-54 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 558 5.5e-54 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 558 5.5e-54 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 558 5.5e-54 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 558 5.5e-54 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 556 8.9e-54 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 544 1.7e-52 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 536 1.2e-51 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 264 7.8e-23 1
UNIPROTKB|C9JFU6 - symbol:UXS1 "UDP-glucuronic acid decar... 264 7.8e-23 1
UNIPROTKB|C9J3T9 - symbol:UXS1 "UDP-glucuronic acid decar... 236 7.2e-20 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 203 3.7e-16 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 173 3.4e-13 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 173 3.4e-13 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 175 4.7e-13 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 169 2.5e-12 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 166 6.0e-12 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 164 1.1e-11 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 163 1.3e-11 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 161 1.8e-11 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 161 2.1e-11 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 161 2.5e-11 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 156 7.2e-11 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 155 9.3e-11 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 155 1.0e-10 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 139 1.1e-10 2
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 155 1.1e-10 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 155 1.1e-10 1
TAIR|locus:2200018 - symbol:AXS2 "UDP-D-apiose/UDP-D-xylo... 156 1.2e-10 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 154 1.5e-10 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 153 1.5e-10 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 153 1.6e-10 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 156 2.9e-10 1
TAIR|locus:2041974 - symbol:AXS1 "UDP-D-apiose/UDP-D-xylo... 152 3.1e-10 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 149 4.5e-10 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 149 4.9e-10 1
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 153 6.2e-10 1
UNIPROTKB|P0A5D1 - symbol:MT0522 "Uncharacterized protein... 147 1.0e-09 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 146 1.1e-09 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 145 1.3e-09 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 143 2.1e-09 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 144 2.1e-09 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 145 2.3e-09 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 142 2.9e-09 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 142 2.9e-09 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 142 3.1e-09 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 143 3.8e-09 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 140 4.8e-09 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 139 6.0e-09 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 139 6.0e-09 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 139 6.8e-09 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 138 1.8e-08 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 137 4.5e-08 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 138 5.0e-08 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 138 5.0e-08 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 134 1.7e-07 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 133 2.1e-07 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 91 2.6e-07 2
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 133 2.7e-07 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 133 2.8e-07 1
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 131 5.9e-07 1
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 131 5.9e-07 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 131 6.4e-07 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 130 7.7e-07 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 130 8.0e-07 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 133 8.3e-07 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 130 8.6e-07 1
ZFIN|ZDB-GENE-030131-5673 - symbol:hsd3b7 "hydroxy-delta-... 130 9.2e-07 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 128 1.4e-06 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 128 1.5e-06 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 131 1.7e-06 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 128 1.7e-06 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 127 1.8e-06 1
UNIPROTKB|I3L2H6 - symbol:HSD3B7 "3 beta-hydroxysteroid d... 119 2.1e-06 1
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 128 2.4e-06 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 127 2.4e-06 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 128 2.8e-06 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 126 3.0e-06 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 126 3.1e-06 1
RGD|628727 - symbol:Hsd3b7 "hydroxy-delta-5-steroid dehyd... 126 3.1e-06 1
UNIPROTKB|O35048 - symbol:Hsd3b7 "3 beta-hydroxysteroid d... 126 3.1e-06 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 126 3.3e-06 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 129 3.5e-06 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 129 3.5e-06 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 126 3.6e-06 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 126 3.6e-06 1
MGI|MGI:2141879 - symbol:Hsd3b7 "hydroxy-delta-5-steroid ... 126 3.7e-06 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 125 4.3e-06 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 125 4.5e-06 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 125 4.8e-06 1
WARNING: Descriptions of 49 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 155/174 (89%), Positives = 161/174 (92%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
MA SNG + +KPPP PSPLR SKFFQSNMRILVTGGAGFIGSHLVDKLM+NEKNEV
Sbjct: 1 MASNSSNGT--TTTKPPPMPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 58
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPL +EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 59 IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKT 118
Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174
IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIG+ S
Sbjct: 119 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRS 172
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 149/170 (87%), Positives = 161/170 (94%)
Query: 5 ISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
+++ + ++ KPPP+PSPLR SKF QSNMRIL++GGAGFIGSHLVDKLMENEKNEVIV D
Sbjct: 1 MASSDKQTSPKPPPSPSPLRNSKFCQSNMRILISGGAGFIGSHLVDKLMENEKNEVIVAD 60
Query: 65 NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
NYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN
Sbjct: 61 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 120
Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174
VIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIG+ S
Sbjct: 121 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRS 170
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 145/163 (88%), Positives = 156/163 (95%)
Query: 12 SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71
+ +KPPP+PSPLR SKF Q NMRIL++GGAGFIGSHLVDKLMENEKNEV+V DNYFTGSK
Sbjct: 24 NTTKPPPSPSPLRNSKFCQPNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSK 83
Query: 72 DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 131
+NL+KWIGHPRFELIRHDVTEPLLIEVD+IYHLACPASPIFYKYNPVKTIKTNVIGTLNM
Sbjct: 84 ENLKKWIGHPRFELIRHDVTEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 143
Query: 132 LGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174
LGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIG+ S
Sbjct: 144 LGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRS 186
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 106/145 (73%), Positives = 125/145 (86%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
+ +R++VTGGAGF+GSHLVD+LM + VIVVDN+FTG K+N+ +P FE+IRHD
Sbjct: 116 RKGLRVVVTGGAGFVGSHLVDRLMARG-DTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 174
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
V EP+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 175 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 234
Query: 150 VYGDPLVHPQDESYWGNVNPIGMFS 174
VYGDPL HPQ E+YWGNVNPIG+ S
Sbjct: 235 VYGDPLQHPQVETYWGNVNPIGVRS 259
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 540 (195.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 100/157 (63%), Positives = 124/157 (78%)
Query: 19 TPSPLRFSKF----FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL 74
T +P ++ K +++ RIL+TGGAGF+GSHLVD LM + +EVIVVDN+FTG K N+
Sbjct: 98 TSTPRKYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMV-QGHEVIVVDNFFTGRKRNV 156
Query: 75 RKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
W+GH FELI HD+ PL IE+D+IYHLA PASP Y YNPVKTIKTN +GT+N+LGL
Sbjct: 157 EHWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGL 216
Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
AKRV A++L+ STSEVYGDP VHPQ E+YWG+VNPIG
Sbjct: 217 AKRVMAKVLIASTSEVYGDPTVHPQPETYWGHVNPIG 253
Score = 37 (18.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 14 SKPPPTPSPLRFS 26
+K PPT SPL+ S
Sbjct: 48 AKWPPTESPLQRS 60
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 107/150 (71%), Positives = 121/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 80 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 137
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 138 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 197
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ+E YWG+VNPIG
Sbjct: 198 LLLASTSEVYGDPEVHPQNEDYWGHVNPIG 227
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 107/150 (71%), Positives = 121/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 77 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 134
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 135 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 194
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ+E YWG+VNPIG
Sbjct: 195 LLLASTSEVYGDPEVHPQNEDYWGHVNPIG 224
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 108/150 (72%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RILVTGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILVTGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIG 226
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 73 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 130
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 131 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 190
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 191 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 220
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 22 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 79
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 80 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 169
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 22 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 79
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 80 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 169
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 226
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 226
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 226
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/150 (71%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 226
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 106/150 (70%), Positives = 120/150 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 56 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 113
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 114 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 173
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+LL STSEVYGDP VHPQ E YWG+VNP+G
Sbjct: 174 LLLASTSEVYGDPEVHPQTEDYWGHVNPVG 203
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 105/167 (62%), Positives = 125/167 (74%)
Query: 6 SNGNHNSASKPPPTPSP-LRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
+NG+ A P P +R+ ++ RIL+TGGAGF+GSHLVDKLM + +EVI +D
Sbjct: 110 ANGDEIVAPLPTTKSFPSVRYRNE-ETRKRILITGGAGFVGSHLVDKLML-DGHEVIALD 167
Query: 65 NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
NYFTG K N+ WIGHP FE++ HDV P +EVDQIYHLA PASP Y YNPVKTIKTN
Sbjct: 168 NYFTGRKKNVEHWIGHPNFEMVHHDVVNPYFVEVDQIYHLASPASPPHYMYNPVKTIKTN 227
Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
+GT+NMLGLAKRV A +LL STSEVYGDP VHPQ E+YWG+VN IG
Sbjct: 228 TLGTINMLGLAKRVKATVLLASTSEVYGDPEVHPQPETYWGHVNTIG 274
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 99/142 (69%), Positives = 124/142 (87%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
MRILVTGGAGFIGSHL ++L+E + ++V+ +DN+FTGSK N+ + + RFE+IRHD+ E
Sbjct: 1 MRILVTGGAGFIGSHLCERLLE-QGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIE 59
Query: 93 PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
P+L+EVD+IY+LACPASP+ Y+YNPVKTIKT+V+GT+NMLGLAKRV ARIL STSEVYG
Sbjct: 60 PILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYG 119
Query: 153 DPLVHPQDESYWGNVNPIGMFS 174
DP +HPQ ESYWGNVNPIG+ S
Sbjct: 120 DPTIHPQPESYWGNVNPIGIRS 141
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
>UNIPROTKB|C9J3T9 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00915766 ProteinModelPortal:C9J3T9 SMR:C9J3T9 STRING:C9J3T9
Ensembl:ENST00000436241 ArrayExpress:C9J3T9 Bgee:C9J3T9
Uniprot:C9J3T9
Length = 52
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG 165
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG 52
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 203 (76.5 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/138 (34%), Positives = 77/138 (55%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI------- 86
+ +V GGAG IGSH VD+L++ + EVI+ DN+ G+++NL + + PR ++
Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67
Query: 87 RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 145
+ D+ L VD ++H A Y+Y P +TN+ GT N+L G R++ +
Sbjct: 68 QTDILNTALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRLVFS 126
Query: 146 STSEVYGDPLVHPQDESY 163
S++ VYGD L P E++
Sbjct: 127 SSASVYGDALEEPMTEAH 144
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 134 LAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
LAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIG 70
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 134 LAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171
LAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIG 70
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 175 (66.7 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 53/159 (33%), Positives = 86/159 (54%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
+LVTGG GFIGSHLVD L+ ++ +V V+DN GS +NL K + E+I ++T+
Sbjct: 4 VLVTGGCGFIGSHLVDALL-SQGFKVRVMDNLSNGSLENL-KCGQRDKLEIINGNLTDKF 61
Query: 95 LIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
L++ + ++HLA A+ + ++ N + T N+L +R R++ S++
Sbjct: 62 LLDSAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASSA 121
Query: 149 EVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLIGE 187
VYG+ + DE Y G + PI ++ G KL GE
Sbjct: 122 AVYGESGLTVLDEDY-GPLLPISLY------GASKLAGE 153
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 169 (64.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 46/123 (37%), Positives = 69/123 (56%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIGH-PRFELIRHD 89
+ L+TGGAGFIGSHL ++L+ N V +VDN++ G D L K I P L ++
Sbjct: 4 KCLITGGAGFIGSHLAEELVGRGYN-VTIVDNFYKGKNKYHDELMKEIRVIPISVLDKNS 62
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
+ E L+ + D ++HLA ++ I+TN GT N+L A + +++ STSE
Sbjct: 63 IYE-LVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFASTSE 121
Query: 150 VYG 152
VYG
Sbjct: 122 VYG 124
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 166 (63.5 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 33 MRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
MR+LVTGGAGFIG++ V + E+ + V V+D + G +++L L++ D+
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADV--EDAIRLVQGDI 58
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T+ L+ E D + H A + NP + TNVIGT +L +R G R+
Sbjct: 59 TDAELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHI 118
Query: 146 STSEVYGD 153
ST EVYGD
Sbjct: 119 STDEVYGD 126
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 43/123 (34%), Positives = 66/123 (53%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE--- 92
+VTGGAGFIGSH+VD L++ +V V+DN G + NL +P D+ E
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGF-QVRVIDNLKGGHRRNLEHRANNPDLTFEIKDICELSA 65
Query: 93 --PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTSE 149
PL VD ++H A + NP+ ++TNV+GT+ +L A+ + L+ ++S
Sbjct: 66 PHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYAASSS 125
Query: 150 VYG 152
YG
Sbjct: 126 CYG 128
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 163 (62.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 49/150 (32%), Positives = 75/150 (50%)
Query: 33 MRILVTGGAGFIGSHLVD-KLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
MR+LVTGGAGFIG++ V L E + + V+D + GS+++L R L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVAD--RIRLVQGDI 58
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T+ L+ E D + H A +P + +NV+GT +L +R R+
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 146 STSEVYGD-PLVHPQDESYWGNVNPIGMFS 174
ST EVYGD L +P + NP +S
Sbjct: 119 STDEVYGDLELDNPARFNETTPYNPSSPYS 148
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 161 (61.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 48/138 (34%), Positives = 71/138 (51%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD-VT 91
MR LVTG AGFIGS LVD+L+ + + V+ +DN+ TG NL + + D VT
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLA-DGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVT 59
Query: 92 EPLLIEVDQ-----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 145
L ++Q ++HLA +P NVIGT+ + A++ G R I+ T
Sbjct: 60 ADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHT 119
Query: 146 STS-EVYGDPLVHPQDES 162
S+ +YG P +P E+
Sbjct: 120 SSGGSIYGTPPEYPTPET 137
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 161 (61.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M+IL++GGAG+IGSH + + ++ + +E+ V+DN GSK + F+ D+++
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTD-HEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSD 59
Query: 93 ----PLLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
L E D I H A NP+K N + T N++ + G + +
Sbjct: 60 FQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIF 119
Query: 145 TSTSEVYGDPLVHPQDE-SYWGNVNPIG----MFSFVLKDGIM 182
+ST+ YG+P E S +NP G M VL+D M
Sbjct: 120 SSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASM 162
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 161 (61.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 47/129 (36%), Positives = 68/129 (52%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
I+VTGGAGFIGS+ V + N + V V+D + G++ NL + +G R EL+ D+ +
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGD-RVELVVGDIAD 65
Query: 93 PLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
L++ D I H A + +P I TN +GT +L A++ R ST
Sbjct: 66 SELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVST 125
Query: 148 SEVYGD-PL 155
EVYGD PL
Sbjct: 126 DEVYGDLPL 134
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 156 (60.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
M ILVTGGAGFIGS+ V ++++ E ++I D ++G+ +N++ HP + ++ ++
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60
Query: 91 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARI 142
L+E V I + A + NP+ TNVIGT+ +L L K+ ++
Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKL 120
Query: 143 LLTSTSEVYG 152
+ ST EVYG
Sbjct: 121 VQVSTDEVYG 130
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 155 (59.6 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 53/138 (38%), Positives = 69/138 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
ILVTG GFIGSHL + L++ K + N F +L K E++ D+ +
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFN-FWGHLEKSPFLKDMEVVSGDLRDS 62
Query: 94 LLIE-----VDQIYHL-ACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
E +D I+HL A A P Y Y P + TNV GTLNML AK+ + + T
Sbjct: 63 FFCEKITKNIDAIFHLGALIAIP--YSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHT 120
Query: 146 STSEVYGDPLVHPQDESY 163
STSEVYG P DE +
Sbjct: 121 STSEVYGTAFYVPIDEKH 138
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 155 (59.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 52/144 (36%), Positives = 72/144 (50%)
Query: 34 RILVTGGAGFIGSHLVDKL-MENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH---- 88
+ILVTG GFIGSHL + L M V N F N W+ H EL++
Sbjct: 7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSF-----NSWGWLDHLDPELLKSLDVF 61
Query: 89 --DVTEPLLIE-----VDQIYHLACP-ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
D+ +P + D + HLA A P Y ++P + TNV GTLN++ A+ +G
Sbjct: 62 AGDIRDPHGVREAMKGCDVVLHLAALIAIPYSY-HSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 140 ARILLTSTSEVYGDPLVHPQDESY 163
A+++ TSTSEVYG P E +
Sbjct: 121 AKVVHTSTSEVYGTARFVPITEEH 144
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 139 (54.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 49/158 (31%), Positives = 79/158 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSK-DNLRKWIGHPRFELIRHD 89
ILVTG AGFIG HL +L++ + V+ +DN Y K D LR+ G F +R
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRG-DRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 90 VTE-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
+ + P L ++ D + +LA A + NP + +N++G +N+L + G +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 143 LL-TSTSEVYGDPLVHPQDESYWGNVN-PIGMFSFVLK 178
L+ S+S VYG P S NV+ P+ +++ K
Sbjct: 123 LVYASSSSVYGANTAMPF--SIHHNVDHPVSLYAATKK 158
Score = 35 (17.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 165 GNVNPIGMFSFV 176
GN NP+ + +F+
Sbjct: 263 GNNNPVELLAFI 274
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 155 (59.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/157 (31%), Positives = 78/157 (49%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
L+TG AGFIGS+L+++L++ + VI +DN+ TG + NL +W+ RF I
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQT-VIGLDNFATGRQHNLDEVQSLVTSEQWM---RFSFI 74
Query: 87 RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + + E VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGN-VNPIGMFSFV 176
++S YGD P+ E GN ++P + +V
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYV 171
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 155 (59.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/157 (31%), Positives = 78/157 (49%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
L+TG AGFIGS+L+++L++ + VI +DN+ TG + NL +W+ RF I
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQT-VIGLDNFATGRQHNLDEVQSLVTSEQWM---RFSFI 74
Query: 87 RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + + E VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGN-VNPIGMFSFV 176
++S YGD P+ E GN ++P + +V
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYV 171
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 156 (60.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/147 (33%), Positives = 69/147 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIGHPRFELI-- 86
M I + G GFIGSHL +KLM ++V+ +D Y K L +W G +F I
Sbjct: 18 MTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQWAGRIQFHRINI 77
Query: 87 RHDVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
+HD E L+ D +LA +P Y P+ TI +N I L ++ R++
Sbjct: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
Query: 146 STSEVYGD------PLVHP--QDESYW 164
ST EVYG P HP QD ++
Sbjct: 138 STCEVYGKTIGSFLPKDHPLRQDPEFY 164
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 154 (59.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/137 (33%), Positives = 66/137 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+LVTGGAGFIGSHL+ L + +I VDN + + NLR + I DV +
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
PL I+ +D ++H A P + ++ NV GT ++ + R +
Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128
Query: 145 TSTSEVYGDPLVHPQDE 161
ST EVYGD + P DE
Sbjct: 129 ISTDEVYGDSVDQPFDE 145
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 153 (58.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/152 (34%), Positives = 71/152 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNY-FTGSKDNLRKWIGHPRFEL 85
M+ILVTGGAGFIGSH V L+ + +V VVD + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 86 IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 138
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPI 170
G R L ST EVYG D W +P+
Sbjct: 121 G-RFLHVSTDEVYGSI-----DTGSWAEGHPL 146
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 153 (58.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 49/132 (37%), Positives = 68/132 (51%)
Query: 35 ILVTGGAGFIGSHLVDKLM-ENEKNEVIV--VDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
+LVTG AGFIGS V L+ +V+V +D + G+ DNL GHPR+ R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 91 TE-P---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
+ P ++ DQ+ HLA + + ++TNV GT +L A R G A +
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 146 STSEVYGDPLVH 157
ST EVYG L H
Sbjct: 125 STDEVYGS-LEH 135
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 156 (60.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 39/125 (31%), Positives = 66/125 (52%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYG 152
SEVYG
Sbjct: 433 SEVYG 437
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 152 (58.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 43/127 (33%), Positives = 63/127 (49%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIGHPRFELI-- 86
+ I + G GFIGSHL +KL+ ++V+ +D Y K L +W G +F I
Sbjct: 18 LTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVEWSGRIQFHRINI 77
Query: 87 RHDVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
+HD E L+ D I +LA +P Y P+ TI +N I L ++ R++
Sbjct: 78 KHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
Query: 146 STSEVYG 152
ST EVYG
Sbjct: 138 STCEVYG 144
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 149 (57.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 49/138 (35%), Positives = 75/138 (54%)
Query: 35 ILVTGGAGFIGSHLVDKL-MENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV-TE 92
ILVTGGAG+IGSH+V +L ++NEK V+VVDN G K + R +LI D E
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEK--VLVVDNLSKGHKKAV-----DTRAKLIVGDFGDE 54
Query: 93 PLLIEVDQIY------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 145
LL+E+ + Y H+A + P K + N+ TL++L + + + ++ +
Sbjct: 55 NLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFS 114
Query: 146 STSEVYGDPLVHPQDESY 163
ST+ VYG+P P E +
Sbjct: 115 STAAVYGEPEKWPITEDF 132
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 149 (57.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDV 90
M ILVTGGAG+IG+H V +L+ N +EVIV+DN S + L + I + D+
Sbjct: 1 MTILVTGGAGYIGTHTVVELL-NAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQGDI 59
Query: 91 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 142
L++ +D + H A + P+K + NV GTL + + + +
Sbjct: 60 LNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNL 119
Query: 143 LLTSTSEVYGDPLVHPQDESY-WGNVNPIGMFSFVLK 178
+ +S++ VYGDP P E + G NP G +++
Sbjct: 120 VFSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVE 156
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 153 (58.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 38/125 (30%), Positives = 66/125 (52%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ ++K +V +D GS D + + HP F + D++
Sbjct: 320 RVLILGVNGFIGNHLSERLLRDDKYDVYGLD---IGS-DAIERLRSHPNFHFVEGDISIH 375
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + R++ ST
Sbjct: 376 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPST 435
Query: 148 SEVYG 152
SEVYG
Sbjct: 436 SEVYG 440
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 147 (56.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/142 (33%), Positives = 74/142 (52%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
+LVTG F+G +L +L +N N VI VD SKD LR+ +G R E +R D+ P
Sbjct: 26 VLVTGACRFLGGYLTARLAQNPLINRVIAVDA-IAPSKDMLRR-MG--RAEFVRADIRNP 81
Query: 94 LLI------EVDQIYHLACPA-SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
+ EVD + H A + +P +K + NV+G + + ++ + R++L
Sbjct: 82 FIAKVIRNGEVDTVVHAAAASYAPRSGGSAALKEL--NVMGAMQLFAACQKAPSVRRVVL 139
Query: 145 TSTSEVYG----DPLVHPQDES 162
STSEVYG DP++ +D S
Sbjct: 140 KSTSEVYGSSPHDPVMFTEDSS 161
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RI+VTGGAG+IGSH V +L+E VIV DN S + +++ E+ H V
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIV-DNLSNSSLEAIKRVESITGKEIEFHHVDIM 65
Query: 94 LLIEVDQIYHLACPASPIFY-------KYN--PVKTIKTNVIGTLNMLGLA-KRVGARIL 143
+D+I+ S I + + N P+K N+ GTL +L L K +++
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125
Query: 144 LTSTSEVYGDPLVHPQDESY-WGNVNPIGMFSFVLKDGIMK 183
+S++ VYGDP P E + NP G + +GI++
Sbjct: 126 FSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYV-EGILQ 165
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIG--HPRFELIRH 88
MR+LVTGG+G+IGSH +L++N ++VI++DN + L + +G HP F +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89 DV-TEPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ E L+ E+ D + H A + P++ NV GTL ++ + +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESY 163
+ +S++ VYGD P ES+
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF 140
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 53/158 (33%), Positives = 74/158 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIGHPRFELIRHD 89
M +LVTGGAG+IGSH+V +L E V+V DN TG D L + + + R D
Sbjct: 1 MPVLVTGGAGYIGSHVVRQLSEAGYT-VVVYDNLSTGFPDALVHGERLVTGDLSDTARLD 59
Query: 90 VTEPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
L +E + H A P+K N TLN+LG + G R + +S
Sbjct: 60 A---LFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSS 116
Query: 147 TSEVYGDPLVH-PQDESYWGNVNPIG----MFSFVLKD 179
T+ VYG P +ES +NP G M ++L+D
Sbjct: 117 TAAVYGIPDSGVAAEESATVPINPYGTSKLMSEWMLRD 154
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 144 (55.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 49/159 (30%), Positives = 71/159 (44%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTGSK 71
S PP RF K R+LVTGGAGFI SH+V L+ N N +I+ +D + S
Sbjct: 10 SGPPVREEVPRFEK------RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASL 63
Query: 72 DNLRKWIGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTN 124
NL ++ I+ D+ EP I+ +D + H A ++ ++ N
Sbjct: 64 KNLETVSEKENYKFIQGDICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVN 123
Query: 125 VIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES 162
V GT ++ A + + ST EVYG DES
Sbjct: 124 VYGTNVLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDES 162
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 145 (56.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/139 (30%), Positives = 70/139 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
+IL+TGGAGFIGSHL L + KN ++IV+D + + +NL + F+ + ++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 92 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-IL 143
+ L+E +D + HLA +K + N++GT +L K + +
Sbjct: 71 DSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFI 130
Query: 144 LTSTSEVYGDPLVHPQDES 162
ST EVYG L+ D++
Sbjct: 131 YVSTDEVYGSGLIEDNDDN 149
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 142 (55.0 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRH 88
M++LVTGG G+IGSH ++++ VI+ DN + D + K IG P+F ++
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVIL-DNLYNSKVTVLDRIEKVIGVRPQF--VQG 57
Query: 89 DVTEP-LLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + LL++ ++ + H A + P++ NV GTL ++ + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
Query: 142 ILLTSTSE-VYGDPLVHPQDESYWGNV-NPIGMFSFVLKD 179
L+ S+S VYG+P P ES+ NP G ++++
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEE 157
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 142 (55.0 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRH 88
M++LVTGG G+IGSH ++++ VI+ DN + D + K IG P+F ++
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVIL-DNLYNSKVTVLDRIEKVIGVRPQF--VQG 57
Query: 89 DVTEP-LLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + LL++ ++ + H A + P++ NV GTL ++ + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
Query: 142 ILLTSTSE-VYGDPLVHPQDESYWGNV-NPIGMFSFVLKD 179
L+ S+S VYG+P P ES+ NP G ++++
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEE 157
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 49/159 (30%), Positives = 77/159 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIGHPRFELIRHDVT 91
+LVTGGAG+IGSH V +L+E + V VVDNY S +L +K G L H V
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAV-VVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 92 ---EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 141
P L ++ D + H A + P+ N++GT+ +L + + G +
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN 123
Query: 142 ILLTSTSEVYGDPLVHP-QDESYWGNVNPIGMFSFVLKD 179
++ +S++ VYG P P +ES NP G +++
Sbjct: 124 LVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEE 162
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 143 (55.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 21 SPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKW 77
SP FS+ + +LVTGGAG+IGSH +L+ + V +VDN G+ L++
Sbjct: 83 SPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLR-DSYRVTIVDNLSRGNLGAVKTLQQL 141
Query: 78 IGHP-RFELIRHDVTEPLLIE-------VDQIYHLACPA---SPIFYKYNPVKTIKTNVI 126
R + I D+ +PL +E D + H A A Y I +N +
Sbjct: 142 FPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTL 201
Query: 127 GTLNMLGLAKRVGARILLTSTSEVYGDPLVHP-QDESYWGNVNPIGMFSFVLKDGIM 182
G L +A+ +++ +ST YG+P P +++ +NP G + +D I+
Sbjct: 202 GVLE--AMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMIL 256
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 140 (54.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 46/164 (28%), Positives = 82/164 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLR--KWIGHPRFELIRHD 89
M +L+TGG G+IGSH V +L+++ K E+++VDN S L K I + I+ D
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKAD 60
Query: 90 VTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG-LAKRVGAR 141
V + +E ++ + H A + P+ + NV GT+ +L +AK
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNV-NPIGMFSFVLKDGIMKL 184
++ +S++ VYG+ V P +E+ + NP G +++ + L
Sbjct: 121 LVFSSSATVYGNN-VSPLNETMATSATNPYGQTKLMVEHVLFDL 163
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 139 (54.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFELIRH 88
M+ LVTG AGFIGS +V++L ++V+ +DN Y K I H F I+
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCA-AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 89 DVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGA 140
D+ + ++ E+ D++ HLA A + NP+ +N+IG LN+L G
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 141 RILLTSTSEVYG 152
++ S+S VYG
Sbjct: 120 HLIYASSSSVYG 131
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 139 (54.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFELIRH 88
M+ LVTG AGFIGS +V++L ++V+ +DN Y K I H F I+
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCA-AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 89 DVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGA 140
D+ + ++ E+ D++ HLA A + NP+ +N+IG LN+L G
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 141 RILLTSTSEVYG 152
++ S+S VYG
Sbjct: 120 HLIYASSSSVYG 131
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 139 (54.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 50/162 (30%), Positives = 76/162 (46%)
Query: 11 NSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FT 68
++AS+ + P F+K R+LVTGGAGFI SH++ L+E+ + +IV +D +
Sbjct: 2 SAASREERSGPPGSFAK------RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYC 55
Query: 69 GSKDNLRKWIGHPRFELIRHDVTEP----LLIEVDQI---YHLACPASPIFYKYNPVKTI 121
S NL ++ I+ D+ + LL EV++I H A +
Sbjct: 56 ASLKNLEPVSNKQNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFT 115
Query: 122 KTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES 162
NV GT ++ A G + + ST EVYG L DES
Sbjct: 116 YVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQEFDES 157
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/162 (30%), Positives = 72/162 (44%)
Query: 11 NSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FT 68
+SA + P P F+K R+LVTGGAGFI SH++ L+E+ N +I+ +D +
Sbjct: 2 SSAGRAEPLGPPSSFAK------RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYC 55
Query: 69 GSKDNLRKWIGHPRFELIRHDVTEP----LLIE---VDQIYHLACPASPIFYKYNPVKTI 121
S NL ++ I+ D+ LL E +D + H A +
Sbjct: 56 ASLKNLETISNKQNYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFT 115
Query: 122 KTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES 162
NV GT ++ A + + ST EVYG L DES
Sbjct: 116 YVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDES 157
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 137 (53.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 50/161 (31%), Positives = 72/161 (44%)
Query: 12 SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTG 69
+A + P P F+K R+LVTGGAGFI SH++ L+E+ N +IV +D +
Sbjct: 3 TAVRAEPLGPPNSFAK------RVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCA 56
Query: 70 SKDNLRKWIGHPRFELIRHDVTEP----LLIE---VDQIYHLACPASPIFYKYNPVKTIK 122
S NL ++ I+ D+ + LL E +D + H A +
Sbjct: 57 SLKNLETISDKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY 116
Query: 123 TNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES 162
NV GT +L A + + ST EVYG L DES
Sbjct: 117 VNVYGTHVLLSAAHEARVEKFIYVSTDEVYGGSLDKEFDES 157
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 138 (53.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
IL+TG AGFI SH+ ++L+ + + +++V+D + + NL P F+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 93 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
LLI E+D I H A N + K N+ GT +L K G R +
Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
Query: 144 LTSTSEVYGD 153
ST EVYG+
Sbjct: 129 HVSTDEVYGE 138
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 138 (53.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 41/130 (31%), Positives = 62/130 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
IL+TG AGFI SH+ ++L+ N + +++V+D + NL P F+ ++ D+
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70
Query: 93 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 71 DDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 130
Query: 144 LTSTSEVYGD 153
ST EVYG+
Sbjct: 131 HVSTDEVYGE 140
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 134 (52.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/169 (28%), Positives = 83/169 (49%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDV 90
M IL+TGGAG+IGSH +L+ N ++IVVDN S ++L K I +FE + +V
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNY-KIIVVDNLSNSSIESLNRVKEITGKQFEFYKENV 59
Query: 91 TE-----PLLIE--VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ +E ++ + H A +P+ Y YN N+I + + + +
Sbjct: 60 LNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYN-------NIISAIVLCDVMQ 112
Query: 137 RVGAR-ILLTSTSEVYGDPLVHPQDESYWGNV-NPIGMFSFVLKDGIMK 183
+ + + +S++ VYG P P E + +V NP G +++ IM+
Sbjct: 113 KHNVKNFIFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQ-IMR 160
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 133 (51.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/129 (34%), Positives = 65/129 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M+ILVTGGAGFIGS V K + +E+I+VD T + D R R + + DV +
Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYD--HELIIVDK-LTYAGDLRRIEEVRDRIKFYKADVAD 57
Query: 93 PLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
IE + + H A + +P I+TNV GT ML +++ G + +
Sbjct: 58 KTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFVH 117
Query: 145 TSTSEVYGD 153
ST EVYG+
Sbjct: 118 ISTDEVYGE 126
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 91 (37.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 117 PVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGMF 173
P++ N+ GT+ +L + R I+ +S++ VYGDP P DE + G NP G
Sbjct: 105 PLEYYNVNLTGTIRLLEAMEAYSVRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKS 164
Query: 174 SFVLKDGIMKL 184
+ +++ I L
Sbjct: 165 KYFIEEMIQDL 175
Score = 88 (36.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
RILVTGGAG+IGSH V +L E E +V+DN
Sbjct: 8 RILVTGGAGYIGSHCVLQLAE-AGYEPVVIDN 38
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 133 (51.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 43/139 (30%), Positives = 64/139 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
R+LVTGGAGFI SH++ L+E+ N +I+ +D + S NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 92 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
+ LL E +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 144 LTSTSEVYGDPLVHPQDES 162
ST EVYG L DES
Sbjct: 139 YVSTDEVYGGSLDKEFDES 157
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 133 (51.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 43/139 (30%), Positives = 64/139 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
R+LVTGGAGFI SH++ L+E+ N +I+ +D + S NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 92 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
+ LL E +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 144 LTSTSEVYGDPLVHPQDES 162
ST EVYG L DES
Sbjct: 139 YVSTDEVYGGSLDKEFDES 157
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 131 (51.2 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 47/126 (37%), Positives = 63/126 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--E 92
+LVTG G+IGS LV KL+ N+ V VD ++ GS D L + HP ELI DV +
Sbjct: 6 VLVTGAGGYIGSVLVPKLL-NKGYHVKAVDRFYFGS-DKLSQ---HPHLELINEDVRRLQ 60
Query: 93 P-LLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
P L VD + LA P+ IF K T + N + LAK+ R +L S
Sbjct: 61 PSLFTNVDYVIDLAAVSNDPSGDIFEK----ATWEINHQARVQSATLAKQQKVKRYILPS 116
Query: 147 TSEVYG 152
+ +YG
Sbjct: 117 SCSIYG 122
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 131 (51.2 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 47/126 (37%), Positives = 63/126 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--E 92
+LVTG G+IGS LV KL+ N+ V VD ++ GS D L + HP ELI DV +
Sbjct: 6 VLVTGAGGYIGSVLVPKLL-NKGYHVKAVDRFYFGS-DKLSQ---HPHLELINEDVRRLQ 60
Query: 93 P-LLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
P L VD + LA P+ IF K T + N + LAK+ R +L S
Sbjct: 61 PSLFTNVDYVIDLAAVSNDPSGDIFEK----ATWEINHQARVQSATLAKQQKVKRYILPS 116
Query: 147 TSEVYG 152
+ +YG
Sbjct: 117 SCSIYG 122
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 131 (51.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G++++L R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60
Query: 92 E-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ P + + D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 130 (50.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 43/125 (34%), Positives = 63/125 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV--T 91
RILVTGGAG++GS LV +L+E V V D F G D L K +P ++ D+ T
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYR-VTVYDTLFFGD-DFLPK--ENPYLNIVEGDIRDT 62
Query: 92 EPL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
E L + D + LAC ++ ++ + + N+ M+ AK G R + S+
Sbjct: 63 ERLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASS 122
Query: 148 SEVYG 152
S VYG
Sbjct: 123 SSVYG 127
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 130 (50.8 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 44/150 (29%), Positives = 73/150 (48%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
MRILVTGGAGFIGS LV L+E ++ V+ D + ++L + R+ ++ D+
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 92 EPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
+ +E D + HLA + P + I+TN++GT +L A R + L
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLE-ACRSYYQTLG 119
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174
+ + L H + +G++ G+FS
Sbjct: 120 QAQQRRFR--LHHISTDEVFGSLTETGLFS 147
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 133 (51.9 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 45/160 (28%), Positives = 79/160 (49%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGH--PRFE--LIR 87
+LVTGGAG+IGSH V +L+EN + +V DN + D++ + H P +E L
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 72
Query: 88 HDVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
E + E +D + H A + P++ N++GT+ +L L ++ ++ +
Sbjct: 73 RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 132
Query: 145 TSTSEVYGDPLVHPQ-----DESYWGNVNPIGMFSFVLKD 179
+S++ VYGD P +E G NP G + +++
Sbjct: 133 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN 172
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 130 (50.8 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 34/111 (30%), Positives = 62/111 (55%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L + +PR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
++ D + HLA + + + I+TN++GT N+L A+
Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAAR 113
>ZFIN|ZDB-GENE-030131-5673 [details] [associations]
symbol:hsd3b7 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase" species:7955
"Danio rerio" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-030131-5673 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0016853 EMBL:BC045457 IPI:IPI00489625
RefSeq:NP_956103.1 UniGene:Dr.32972 ProteinModelPortal:Q7ZVQ1
STRING:Q7ZVQ1 GeneID:327462 KEGG:dre:327462 InParanoid:Q7ZVQ1
NextBio:20810040 ArrayExpress:Q7ZVQ1 Uniprot:Q7ZVQ1
Length = 368
Score = 130 (50.8 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVD-NYFTGSKDNLRKWIGHPRFELI 86
+S + ++TGG GF+G HL+ L+E +KN E+ + D N F + + + + +I
Sbjct: 6 KSKLTYVITGGCGFLGQHLLRVLLEKKKNVKEIRLFDKNVFPSLQSESTEDV---KVVII 62
Query: 87 RHDVTE-----PLLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGA 140
+ D+T+ + D ++H A ++YK P K I NV GT N + +G
Sbjct: 63 QGDITKYEDVRNAFLGADLVFHAASLVD-VWYKI-PEKVIFAVNVQGTENAIKACVEIGI 120
Query: 141 RILL-TSTSEVYGDPLVHPQDESYWGNVN-PIGMF 173
+ L+ TS+ EV G P V DE GN + P +F
Sbjct: 121 QYLVYTSSMEVVG-PNVKG-DEFVRGNEDTPYNIF 153
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 128 (50.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 50/169 (29%), Positives = 85/169 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSKDNLRKWIGHPR----F-- 83
MR+ +TGGAGFIGS L L E K+E++++D T NL+ + GH + F
Sbjct: 1 MRVAITGGAGFIGSQLALNLQE--KHEILIIDKMRSSATFENGNLQSF-GHFKNLLEFDG 57
Query: 84 ELIRHDVT-EPLLIEVDQ-----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
EL D+ E +L +++ I+H A + + + K ++TN+ + + L+
Sbjct: 58 ELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVF--DQTKVLQTNLNTFKDFIELSID 115
Query: 138 VGARILLTSTSEVYGD---PLVHPQDESYWGNVNPIGMFSFVLKDGIMK 183
+ A+++ S++ VYGD P +DE NP FS ++ D + K
Sbjct: 116 LNAKLIYASSASVYGDAKSPQTVGKDEE---PKNPYA-FSKLMMDKLAK 160
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 128 (50.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/124 (32%), Positives = 61/124 (49%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK----WIGHPRFELIRHDV 90
IL+ GGAG+IGSH V KL++ E V+VVDN TG +D + + + G R + DV
Sbjct: 4 ILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDV 62
Query: 91 TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149
IE + H A + P++ NV G L +L + + + +ST+
Sbjct: 63 FTQENIEA--VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA 120
Query: 150 VYGD 153
YG+
Sbjct: 121 TYGE 124
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/150 (30%), Positives = 69/150 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
IL+TG AGFI SH+ ++L+ + + +++V+D + + NL P F+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 93 P-----LLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
Query: 144 LTSTSEVYG----DPLVHPQDESYWGNVNP 169
ST EVYG D LV + S NP
Sbjct: 129 HVSTDEVYGETDEDALVGNHEASQLLPTNP 158
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 128 (50.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 45/162 (27%), Positives = 73/162 (45%)
Query: 11 NSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FT 68
++AS+ + P F+K R+LVTGGAGFI SH++ L+E+ N +I+ +D +
Sbjct: 2 SAASREERSGPPGSFAK------RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYC 55
Query: 69 GSKDNLRKWIGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTI 121
S NL ++ I+ D+ + ++ +D + H A +
Sbjct: 56 ASLKNLEPVSNKQNYKFIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFT 115
Query: 122 KTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES 162
NV GT ++ A + + ST EVYG L DES
Sbjct: 116 YVNVYGTHVLVNTAYEARVEKFIYVSTDEVYGGSLDQEFDES 157
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 127 (49.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/137 (33%), Positives = 68/137 (49%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
MR L+TG AGF+G +L + L E + EV F S++N K P E+I D+ +
Sbjct: 1 MRALITGVAGFVGKYLANHLTE-QNVEV------FGTSRNNEAKL---PNVEMISLDIMD 50
Query: 93 PLL-------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARIL 143
I+ D I+HLA +S N T TNV GTL++L + + RIL
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 144 LTSTSEVYGDPLVHPQD 160
+SE YG ++ P++
Sbjct: 111 TIGSSEEYG--MILPEE 125
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 47/141 (33%), Positives = 69/141 (48%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L+ G R I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
+ + H A +F + +P KTI + NV GT N++ + G R L+ TS
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGTRFLVYTS 128
Query: 147 TSEVYG-DPLVHPQDESYWGN 166
+ EV G + HP Y GN
Sbjct: 129 SMEVVGPNTKGHP---FYRGN 146
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 128 (50.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/182 (28%), Positives = 81/182 (44%)
Query: 15 KPPPT-PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
K PT +P FS+ +LVTGGAG+IGSH +L++ E V +VDN G+
Sbjct: 52 KQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSHAALRLLK-ESYRVTIVDNLSRGNLAA 110
Query: 74 LR---KWIGHP-RFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIK 122
+R + P R + I D+ + + D + H A A P+K
Sbjct: 111 VRILQELFPEPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYH 170
Query: 123 TNVIGTLNMLGLAKRVGARILL-TSTSEVYGDPLVHP-QDESYWGNVNPIGMFSFVLKDG 180
TL +L G + L+ +ST YG+P + P +E+ +NP G + +D
Sbjct: 171 NITSNTLVVLETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDI 230
Query: 181 IM 182
I+
Sbjct: 231 IL 232
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 127 (49.8 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/130 (31%), Positives = 67/130 (51%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--- 91
+LVTGGAG+IGSH L+E + +V++VDN + + + ++I H V
Sbjct: 9 VLVTGGAGYIGSHTCVVLLE-KGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLD 67
Query: 92 EPLLIEV--DQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILL 144
EP L +V +Q + H A + P+ K N+ GT+N++ K+ R +
Sbjct: 68 EPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVF 127
Query: 145 TSTSEVYGDP 154
+S++ VYGDP
Sbjct: 128 SSSATVYGDP 137
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 128 (50.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRK-WIGHPRFELIRH 88
+ +LVTG AGF+GSH + + V+ DN Y+ S R+ + + ++
Sbjct: 112 LSVLVTGAAGFVGSHC-SLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 89 DVTE-PLL------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + PLL + I HLA A + NP I +N+ G +N+L +AK +
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 142 --ILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDG 180
I+ S+S VYG +P E + + P +++ K G
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTD-QPASLYAATKKAG 270
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 126 (49.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD---NYFTGS--KDNLRKWIGHPRFELIR 87
M+ILVTG AGFIGS + +L++ E + V VD Y+ +D + F L R
Sbjct: 1 MKILVTGAAGFIGSEMALRLLK-EGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLER 59
Query: 88 HDVTEPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+ + +E + + H A A + +P I N++G+ N++ L++R G
Sbjct: 60 IRIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 141 R-ILLTSTSEVYGDPLVHPQDE 161
+ +++ STS YG P +E
Sbjct: 120 QHLVMASTSSAYGANQKFPFEE 141
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 126 (49.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIG-HPRFELIRH 88
MR+LVTGG+G+IGSH +L+++ ++V+++DN + L + G P F +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSG-HDVVILDNLCNSKRSVLPVIERLSGKQPTF--VEG 57
Query: 89 DV-TEPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ E L+ E+ + + H A + P++ NV GTL ++ + +
Sbjct: 58 DIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESY 163
+ +S++ VYGD P ES+
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF 140
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 126 (49.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/140 (33%), Positives = 69/140 (49%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L+E E E+ V D + + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 LLIEVDQI-YHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 148
+ H+ + +F K +P K NV GT N++ + G R+L+ TS+
Sbjct: 71 HEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYTSSM 130
Query: 149 EVYGDPLV--HPQDESYWGN 166
EV G P V HP Y GN
Sbjct: 131 EVVG-PNVKGHP---FYRGN 146
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 126 (49.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/140 (33%), Positives = 69/140 (49%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L+E E E+ V D + + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 LLIEVDQI-YHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 148
+ H+ + +F K +P K NV GT N++ + G R+L+ TS+
Sbjct: 71 HEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYTSSM 130
Query: 149 EVYGDPLV--HPQDESYWGN 166
EV G P V HP Y GN
Sbjct: 131 EVVG-PNVKGHP---FYRGN 146
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 126 (49.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/146 (28%), Positives = 75/146 (51%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT----GSK--DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + V V+DN+ GS ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNAIRGGSSMPESLRRVQELTGRSVEF 62
Query: 86 IRHDVTEPLLIE-VDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + + YH K P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 129 (50.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 50/170 (29%), Positives = 85/170 (50%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WI--GH-PRFEL 85
SN ILVTGGAG+IGSH V +L+ N +V++VDN S D + + +I H P +++
Sbjct: 2 SNEYILVTGGAGYIGSHTVIELISNGY-KVVIVDNLSNSSYDAVARIEFIVKQHVPFYDV 60
Query: 86 -IR-HDVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
IR ++ + ++ + H A + P+ NV GT+N+L + K +
Sbjct: 61 DIRNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK 120
Query: 142 -ILLTSTSEVYGD-------PLVHPQDESYWGNVNPIGMFSFVLKDGIMK 183
I+ +S++ VYGD ++ + NP G F++ + I+K
Sbjct: 121 TIVFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFII-ESILK 169
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 129 (50.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 50/170 (29%), Positives = 85/170 (50%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WI--GH-PRFEL 85
SN ILVTGGAG+IGSH V +L+ N +V++VDN S D + + +I H P +++
Sbjct: 2 SNEYILVTGGAGYIGSHTVIELISNGY-KVVIVDNLSNSSYDAVARIEFIVKQHVPFYDV 60
Query: 86 -IR-HDVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
IR ++ + ++ + H A + P+ NV GT+N+L + K +
Sbjct: 61 DIRNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK 120
Query: 142 -ILLTSTSEVYGD-------PLVHPQDESYWGNVNPIGMFSFVLKDGIMK 183
I+ +S++ VYGD ++ + NP G F++ + I+K
Sbjct: 121 TIVFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFII-ESILK 169
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 126 (49.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+IL+TGGAGFIGS +V +++N ++ V+ +D + G+ ++L R+ D+
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
+ I + D + HLA + P I+TN++GT +L +A++
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 126 (49.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L + R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFENADIC 60
Query: 92 EP----LLI---EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ L ++D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 126 (49.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 48/141 (34%), Positives = 70/141 (49%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L+E E E+ V D + + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKA--GPVQVTAIQGDVTQA 70
Query: 94 LLIEVDQ-----IYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
+ + H A +F K +P KTI K NV GT N++ + G + L+ TS
Sbjct: 71 HEVAAAMSGSHVVIHTAGLVD-VFGKASP-KTIHKVNVQGTQNVIDACVQTGTQYLVYTS 128
Query: 147 TSEVYGDPLV-HPQDESYWGN 166
+ EV G + HP Y GN
Sbjct: 129 SMEVVGPNIKGHP---FYRGN 146
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 125 (49.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 33/111 (29%), Positives = 61/111 (54%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+ILVTGGAGFIGS +V ++ N ++ V+ +D + G+ ++L +PR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
++ D + HLA + + + I+TN++GT N+L A+
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAAR 113
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 125 (49.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 44/146 (30%), Positives = 78/146 (53%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT---GSKD---NLRKWIGHPRFELIR 87
+ILVTGG G+IGSH V +L+E + V V+DN+ G D +LR+ ++
Sbjct: 4 KILVTGGGGYIGSHCVVELIEAGFHPV-VIDNFSNAVRGEGDVPESLRRIEKFMDTQIEF 62
Query: 88 HDVT---EPLLIEVDQIY------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
H++ +P L ++ +++ H A + P++ + N+ GT+N+L + +
Sbjct: 63 HELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G R ++ +S++ VYGDP P DE +
Sbjct: 123 GVRNLVFSSSATVYGDPQKLPIDEQH 148
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 125 (49.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60
Query: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ + + + D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 119 (46.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGS---KDNLRK---WIGHP-RF 83
++LVTGGAG+IGSH V +L+E V V+DN+ F G ++LR+ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 84 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 119 (46.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGS---KDNLRK---WIGHP-RF 83
++LVTGGAG+IGSH V +L+E V V+DN+ F G ++LR+ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 84 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 125 (49.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVTE 92
+LVTGG G+IGS L+E +V+V DN + S + L + I + E + DVT+
Sbjct: 6 VLVTGGTGYIGSFTTLALLE-AGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTD 64
Query: 93 PLLIE--------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGARIL 143
+ +D + H A + P+ NV GT+ +L + + I+
Sbjct: 65 EAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIV 124
Query: 144 LTSTSEVYGDPLVHPQ-----DESYWGNVNPIGMFSFVLKDGIMKLI 185
+S++ VYGD P + G NP G F ++ I +I
Sbjct: 125 FSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAITDVI 171
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 124 (48.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 34/112 (30%), Positives = 60/112 (53%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M ILVTGG+GFIGS L+ ++ + ++ VI +D + ++ LR+ +PR+ + D+
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 92 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ +IE D + HLA + ++TN++GT +L +AK
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAK 113
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 124 (48.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 46/156 (29%), Positives = 75/156 (48%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKD-NLRKWIGHPRFELIR 87
MR LVTG AGFIG HL +L+ + ++ +DN Y K+ L + P F +
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARG-DHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64
Query: 88 HDVTEPL----LIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 139
D+ + L + D + HLA A + NP + +N++G ++L G +
Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSV 124
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVN-PIGMFS 174
++ S+S VYG +P ES NV+ PI +++
Sbjct: 125 KHLVFASSSSVYGANEKYPFSES--DNVDHPIALYA 158
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 124 (48.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 47/161 (29%), Positives = 81/161 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---SKDNLRKWIGHPR-----FEL- 85
ILVTGGAGFIG+H V +L++ + +V ++DN+ + D +R+ +G F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLK-DGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67
Query: 86 -IRH--DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+R+ D+ E L + D + H A + NP + N++GT+N+ +
Sbjct: 68 DLRNKGDI-EKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 141 RILLTSTSE-VYGDPLVHPQDESY-WGNVNPIGMFSFVLKD 179
++++ S+S VYG P P E + +NP G L++
Sbjct: 127 KMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEE 167
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 124 (48.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 47/161 (29%), Positives = 79/161 (49%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIGHP-----RFEL- 85
ILVTGGAGFIG+H V +L+ N+ +V ++DN + +R+ +G F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLL-NQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLG 67
Query: 86 -IRH--DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+R+ D+ E L D + H A + NP + N++GT+N+ +
Sbjct: 68 DLRNKGDI-EKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 141 RILLTSTSE-VYGDPLVHPQDESY-WGNVNPIGMFSFVLKD 179
++++ S+S VYG P + P E + +NP G L++
Sbjct: 127 KMMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEE 167
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 124 (48.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L PR+ + D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60
Query: 92 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ +E D + HLA + I+TN++GT +L A+
Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 123 (48.4 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 32/115 (27%), Positives = 62/115 (53%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRH 88
+ ILVTGGAGFIGS +V +++N ++ V+ +D + G+ ++L +PR+ +
Sbjct: 4 EGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQV 63
Query: 89 DVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
D+ + ++ D + HLA + + + I+TN++GT ++L A+
Sbjct: 64 DICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAAR 118
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 123 (48.4 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 46/158 (29%), Positives = 74/158 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIV--VDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
ILVTGGAG+IGSH V +L+ N V++ +DN S ++ G L H V
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 92 --EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 142
+P L +V D + H A + P+ N+I T+ +L + G + +
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKL 124
Query: 143 LLTSTSEVYGDPLVHP-QDESYWGNVNPIGMFSFVLKD 179
+ +S++ VYG P P +ES ++P G ++D
Sbjct: 125 VFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIED 162
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 123 (48.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 35 ILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+LVTGGAGFIGS+ ++ + N VI +D + G+ NL +P + ++ D+ +
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGD 69
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR---VGA-- 140
L+ +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 70 ADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIE 129
Query: 141 --RILLTSTSEVYG 152
R L ST EVYG
Sbjct: 130 RFRFLHVSTDEVYG 143
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 124 (48.7 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 21 SPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRK- 76
S R + + +LVTG AGF+G+H V ++ + VI +DN Y+ S R+
Sbjct: 85 SSARIRTSTNNGITVLVTGAAGFVGTH-VSAALKRRGDGVIGLDNFNDYYDPSLKRARRA 143
Query: 77 WIGHPRFELIRHDVTE-PLL------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL 129
+ ++ D+ + LL + + HLA A + NP + +N+ G +
Sbjct: 144 LLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFV 203
Query: 130 NMLGLAKRVGAR--ILLTSTSEVYG 152
N+L + K V + I+ S+S VYG
Sbjct: 204 NLLEICKSVNPQPAIVWASSSSVYG 228
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 123 (48.4 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRHDV 90
+L+TGG G+IGS L+EN+ +V++VDN + S D + G P F + D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDY-DVVIVDNLYNSSAVAIDRIELICGKRPAFHNV--DI 62
Query: 91 TEPLLI--------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGAR 141
T+ + E+D + H A + P++ + NV G++++L + K
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCN 122
Query: 142 ILLTSTSEVYGD 153
I+ +S++ VYGD
Sbjct: 123 IVFSSSATVYGD 134
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 47/155 (30%), Positives = 77/155 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVD--NYFTGSKD--NLRKWIGHPRFELIRH 88
RI+V+GGAGFIG H + +++ N +D NY + + + NL+ + FE +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSF---SNFEFVHL 64
Query: 89 DVTEPL--LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
D+++ L L+++ + I + A +S +PV K N++ T N+L R+ I
Sbjct: 65 DLSDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPSI 123
Query: 143 ---LLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174
L ST EVYGD V+ D +NP +S
Sbjct: 124 GYFLHISTDEVYGD--VYEGDNKENAVMNPTNPYS 156
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 47/155 (30%), Positives = 77/155 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVD--NYFTGSKD--NLRKWIGHPRFELIRH 88
RI+V+GGAGFIG H + +++ N +D NY + + + NL+ + FE +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSF---SNFEFVHL 64
Query: 89 DVTEPL--LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
D+++ L L+++ + I + A +S +PV K N++ T N+L R+ I
Sbjct: 65 DLSDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPSI 123
Query: 143 ---LLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174
L ST EVYGD V+ D +NP +S
Sbjct: 124 GYFLHISTDEVYGD--VYEGDNKENAVMNPTNPYS 156
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGS---KDNLRK---WIGHP-RF 83
++LVTGGAG+IGSH V +L+E V V+DN+ F G ++LR+ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 84 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 119 (46.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 47/141 (33%), Positives = 69/141 (48%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L+ G R I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
+ + H A +F + +P KTI + NV GT N++ + G R L+ TS
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGTRFLVYTS 128
Query: 147 TSEVYG-DPLVHPQDESYWGN 166
+ EV G + HP Y GN
Sbjct: 129 SMEVVGPNTKGHP---FYRGN 146
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 118 (46.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ + D + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 147
+ + H A +F K +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGKTSPETIHEVNVQGTQNVIEACVQTGTRFLIYTSS 129
Query: 148 SEVYGDPLVHPQDESYWGNVN 168
EV G P + Q Y GN N
Sbjct: 130 MEVVG-PNIKGQP-FYRGNEN 148
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 117 (46.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY----FTGSKDNLRKWIGH-PRFELIRHD 89
+L+TGG GFIGS+ ++ KN + NY F S ++ K I PR++ +
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFI--NYDKLAFGASPLHVEKEIRESPRYKFVEAA 68
Query: 90 VTE-PLLI------EVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGL---AKRV 138
+ + P LI EVD + H A + + Y+ + TI+ N+I T +L +
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAA-ITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYK 127
Query: 139 GARILL-TSTSEVYGDPL--VHPQDES 162
G + L+ ST EVYGD P+ ES
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSES 154
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIGHPRFELIRHDVT 91
++LVTGGAG+IGSH V +L+E + V V+DN+ +D++ + + + EL V
Sbjct: 3 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNAIRGEDSMPESLRRVQ-ELTGRSVE 60
Query: 92 EPLLIEVDQ--IYHLACPAS---PIFYK---------YNPVKTIKTNVIGTLNMLGLAKR 137
+ +DQ + HL S I + P+ + N+ GT+ +L + +
Sbjct: 61 FEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRA 120
Query: 138 VGAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 121 HGVKNLVFSSSATVYGNPQYLPLDEAH 147
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 43/168 (25%), Positives = 79/168 (47%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + V V+DN+ + ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNSIRGEDSMPESLRRVQELTGRSVEF 62
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + H A + P+ + N+ GT+ +L + + +
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAM 122
Query: 139 GARILLTSTSE-VYGDPL-VHPQDESYWGNVNPIGMFSFVLKDGIMKL 184
G + L+ S+S VYG P+ + + G P G F +++ I L
Sbjct: 123 GVKSLVFSSSATVYGKPVPASGRGPPHRGCTKPYGKSKFFIEEMIQDL 170
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 117 (46.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIV--VDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
+LV+GGAG+IGSH V +L+ + V+V +DN S ++K L H V
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 92 ------EPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 142
E + E D + H A + P+ N++GT+ +L + + G + +
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNL 125
Query: 143 LLTSTSEVYGDPLVHPQDESY-WGNVNPIGMFSFVLKD 179
+ +S++ VYG P P E + +NP G +++
Sbjct: 126 VFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEE 163
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 118 (46.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFEL 85
++ + +LVTG AGF+G+H V ++ + V+ +DN Y T K + + + +
Sbjct: 89 RNGVSVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFI 147
Query: 86 IRHDVTEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
+ D+ + L+ EV + HLA A + NP + +N+ G +N+L + K
Sbjct: 148 VEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSA 207
Query: 139 GAR--ILLTSTSEVYG 152
+ I+ S+S VYG
Sbjct: 208 NPQPAIVWASSSSVYG 223
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 116 (45.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + V V+DN+ + ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNSIRGEDSMPESLRRVQELTGRSVEF 62
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + H A + P+ + N+ GT+ +L + +
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 122
Query: 139 GARILLTSTSE-VYGDPLVHPQDESY 163
G + L+ S+S VYG+P P DE++
Sbjct: 123 GVKSLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 116 (45.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 36/111 (32%), Positives = 55/111 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+IL+TGGAGFIGS LV ++ + V+VVD + G+ +L RF + D+ +
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 93 PL-LIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
L V D + HLA + P I+TN++GT +L A+
Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAAR 113
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 115 (45.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
F + + +V GG+GF+G H+V+KL++ + V V D D ++ ++G +L
Sbjct: 5 FRSTGKKCVVIGGSGFLGQHMVEKLLDKGYS-VNVFDIQKRFDHDRVQFFLG----DLCN 59
Query: 88 HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
+ P L +V +H A PA N K N +GT ++ K G +++LTS
Sbjct: 60 KEALLPALQDVSVAFHCASPAPS---SDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTS 116
Query: 147 TSEV 150
++ V
Sbjct: 117 SASV 120
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 116 (45.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRK-WIGHPRFELIRHDV 90
+LVTG AGF+G+H V ++ + V+ +DN Y+ S R+ + ++ D+
Sbjct: 93 VLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDI 151
Query: 91 TEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 141
+ L+ EV + HLA A + NP + +N+ G +N+L + K +
Sbjct: 152 NDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPA 211
Query: 142 ILLTSTSEVYG 152
I+ S+S VYG
Sbjct: 212 IVWASSSSVYG 222
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 46/159 (28%), Positives = 76/159 (47%)
Query: 36 LVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSK---DNLRKWIGHPR---FELIRH 88
L+TG AGFIGS+L++ L+ N+K V+ +DN+ TG + D ++ + + F ++
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQK--VVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 89 DVTE-----PLLIE----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
D+ + L VD I H A S +P+ T N+ G L ML AK
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 140 AR-ILLTSTSEVYGDPLVHPQDESYWGN-VNPIGMFSFV 176
+ + ++S YGD P+ E G ++P + +V
Sbjct: 137 VKSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYV 175
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 46/159 (28%), Positives = 76/159 (47%)
Query: 36 LVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSK---DNLRKWIGHPR---FELIRH 88
L+TG AGFIGS+L++ L+ N+K V+ +DN+ TG + D ++ + + F ++
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQK--VVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 89 DVTE-----PLLIE----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
D+ + L VD I H A S +P+ T N+ G L ML AK
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 140 AR-ILLTSTSEVYGDPLVHPQDESYWGN-VNPIGMFSFV 176
+ + ++S YGD P+ E G ++P + +V
Sbjct: 137 VKSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYV 175
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTE 92
R+LVTGGAGF+G++LV L++ ++ S D + HP+ E+++ D+T+
Sbjct: 16 RVLVTGGAGFVGANLVTTLLDR---------GHWVRSFDRAPSLLPAHPQLEVLQGDITD 66
Query: 93 P----LLIE-VDQIYHLAC-----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-R 141
++ +D I+H A + + +Y ++ NV GT N+L +R G R
Sbjct: 67 ADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQ-RSFAVNVGGTENLLHAGQRAGVQR 125
Query: 142 ILLTST-SEVYGDPLVHPQDES 162
+ TS+ S V G + DE+
Sbjct: 126 FVYTSSNSVVMGGQNIAGGDET 147
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 45/165 (27%), Positives = 79/165 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVT- 91
ILVTGGAG+IGSH V +L+ N +VI+VDN D + + +I + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELI-NHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRD 66
Query: 92 -EPLL-----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILL 144
E L ++ + H A + P++ N+ GT+ +L + + + ++
Sbjct: 67 KEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVF 126
Query: 145 TSTSEVYGDPL----VHPQDESYWGN-VNPIGMFSFVLKDGIMKL 184
+S++ VYGD + P ES + NP G + +++ I L
Sbjct: 127 SSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDL 171
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
Identities = 39/146 (26%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-----GSK-DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + + V+DN+ GS ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPM-VIDNFHNAIRGGGSMPESLRRVQDLTGRSVEF 62
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + H A + P+ + N+ GT+ +L + +
Sbjct: 63 EEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRKWIGHPR-FELIRHDV 90
+LVTG GF+GSH V + + V+ +DN Y+ S R+ + R ++ D+
Sbjct: 90 VLVTGATGFVGSH-VSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDL 148
Query: 91 TEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 141
+ L+ +V + HLA A + NP + +N+ G +N+L + K +
Sbjct: 149 NDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPA 208
Query: 142 ILLTSTSEVYG 152
I+ S+S VYG
Sbjct: 209 IVWASSSSVYG 219
>UNIPROTKB|K7GMD9 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 EMBL:CU468868
Ensembl:ENSSSCT00000033816 Uniprot:K7GMD9
Length = 215
Score = 107 (42.7 bits), Expect = 0.00031, P = 0.00031
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI 96
V GG+GF+G H+V++L+E V V D ++ ++G +L P L
Sbjct: 30 VIGGSGFLGQHMVEQLLERGY-AVNVFDKRQGFDNPRVQFFLG----DLCNQQDLYPALK 84
Query: 97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
V ++H A PA N + N IGT N++ + G +++LTS++ V
Sbjct: 85 GVSTVFHCASPAPS---SNNKELFYRVNYIGTKNVIETCREAGVQKLILTSSASV 136
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI 96
V GG+GF+G H+V++L+E V V D + ++ +IG +L P L
Sbjct: 31 VIGGSGFLGQHMVEQLLERGYT-VNVFDIHQGFDNPRVQFFIG----DLCNQQDLYPALK 85
Query: 97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
V ++H C ASP Y N + N IGT ++ + G +++LTS++ V
Sbjct: 86 GVSTVFH--C-ASPPPYSNNKELFYRVNFIGTKTVIETCREAGVQKLILTSSASV 137
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 111 (44.1 bits), Expect = 0.00033, P = 0.00033
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 147
+ + H A +F + +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASPETIYEVNVQGTKNVIEACVQTGTRFLVYTSS 129
Query: 148 SEVYG 152
EV G
Sbjct: 130 MEVVG 134
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
Identities = 39/142 (27%), Positives = 67/142 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV---------DNYFTGSKDNLRKWIGHPRF 83
M++ +TG G +GSHL + L+ ++V D F G++ ++ W +
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLA-AGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSV--Y 57
Query: 84 ELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--AR 141
+ I P D ++HLA + P PV+T+ TN++GT + +RV A+
Sbjct: 58 DSIA--TFRP-----DAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAK 110
Query: 142 ILLTSTSEVYG--DPLVHPQDE 161
I++ +S YG DP P +E
Sbjct: 111 IIVAGSSAEYGFVDPSEVPINE 132
>FB|FBgn0036698 [details] [associations]
symbol:CG7724 species:7227 "Drosophila melanogaster"
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=ISS] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 KO:K00070 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:AY069197 RefSeq:NP_648957.1
UniGene:Dm.7711 SMR:Q9VVE3 IntAct:Q9VVE3 MINT:MINT-971239
EnsemblMetazoa:FBtr0075284 GeneID:39918 KEGG:dme:Dmel_CG7724
UCSC:CG7724-RA FlyBase:FBgn0036698 InParanoid:Q9VVE3
OrthoDB:EOG4Z34W5 GenomeRNAi:39918 NextBio:816080 Uniprot:Q9VVE3
Length = 398
Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
Identities = 42/131 (32%), Positives = 66/131 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN----EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
+LVTGG+GF+G HL+ +L+E ++ E+ +D K+N IGH L+R V
Sbjct: 9 LLVTGGSGFLGQHLIKQLLERKEELGIKEIRSLD--IVPYKNN----IGHEETSLLRTYV 62
Query: 91 TE---------PLLIEVDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+ P+ VD ++H C AS I Y N + + NV GTL ++ L +
Sbjct: 63 ADIGGDLKALSPIFNGVDGVFH--CAASVKIEYPPNYEELERVNVNGTLAVVDLCIQNNV 120
Query: 141 -RILLTSTSEV 150
R++ TS + V
Sbjct: 121 KRLVYTSCTSV 131
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 38/146 (26%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-----GSK-DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + V V+DN+ GS ++L++ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNAIRGKGSMPESLQRVQELTGRSVEF 62
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + H A + P+ + N+ G++ +L + +
Sbjct: 63 EEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>WB|WBGene00016319 [details] [associations]
symbol:C32D5.12 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0009792 GO:GO:0002119 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0010171
GO:GO:0040011 EMBL:FO080708 PIR:T15743 RefSeq:NP_495280.1
ProteinModelPortal:Q09491 SMR:Q09491 DIP:DIP-25635N
MINT:MINT-1046946 STRING:Q09491 PaxDb:Q09491
EnsemblMetazoa:C32D5.12 GeneID:174053 KEGG:cel:CELE_C32D5.12
UCSC:C32D5.12 CTD:174053 WormBase:C32D5.12 eggNOG:NOG271862
HOGENOM:HOG000016937 InParanoid:Q09491 OMA:VNIGCAY NextBio:882303
Uniprot:Q09491
Length = 357
Score = 110 (43.8 bits), Expect = 0.00040, P = 0.00040
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
+ VTGGAG +G ++V +L+ENE+ E+ ++D T S+D RK + + +L E
Sbjct: 4 VAVTGGAGLVGRYVVQRLLENEQIAEIRIIDRQST-SRDESRK-VKLYQIDLNDRKSLEN 61
Query: 94 LLIEVDQIYHLACPASPIFY 113
L D + H A PIFY
Sbjct: 62 ALRGCDGVIHCAHSPFPIFY 81
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 109 (43.4 bits), Expect = 0.00051, P = 0.00051
Identities = 41/133 (30%), Positives = 65/133 (48%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVI-------VVDN-YFTGSKDNLRKWIGHPRFELIR 87
L+TG G +GS + D L+ N EVI +DN Y + N + I +L
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65
Query: 88 HDVTEPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR---- 141
+ + L D I+HLA + P P++T++TN+IGT N+L + + A+
Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYD 125
Query: 142 --ILLTSTSEVYG 152
+ + S+SEVYG
Sbjct: 126 PVVHVCSSSEVYG 138
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 109 (43.4 bits), Expect = 0.00053, P = 0.00053
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 33 MRILVTGGAGFIGSHLVDKLM---------ENEKNEVIVVDNYFTG-SKDNLRKWIGHP- 81
M ILVTG AGFIGSH V +L+ +N N + V D + S + + G
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDV 60
Query: 82 RFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
F+ + DV + +E D I HLA + P++ N++ +LN++ +
Sbjct: 61 PFQNV--DVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQM 118
Query: 135 AKRVGAR-ILLTSTSEVYGDPLVHP-QDESYWGN--VNPIGMFSFVLK 178
+ + + +S++ VYG P P ++S G NP G ++++
Sbjct: 119 CLKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMME 166
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 109 (43.4 bits), Expect = 0.00054, P = 0.00054
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE- 92
R V GG GF+G H+V++L+ + + N F ++R+ +PR + D+
Sbjct: 22 RCTVIGGCGFLGQHMVEQLLA--RGYAV---NVF-----DIRQGFDNPRVQFFLGDLCSQ 71
Query: 93 ----PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
P L V ++H C ASP + N + N IGT N++ K G +++LTS+
Sbjct: 72 QDLYPALKGVSTVFH--C-ASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSS 128
Query: 148 SEV 150
+ V
Sbjct: 129 ASV 131
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 106 (42.4 bits), Expect = 0.00066, P = 0.00066
Identities = 36/118 (30%), Positives = 57/118 (48%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
R V GG+GF+G H+V++L+ V V D +R ++G +L P
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGY-AVNVFDIQQGFDNPQVRFFLG----DLCSRQDLYP 93
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
L V+ ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 94 ALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASV 148
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 44/149 (29%), Positives = 73/149 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSK--DNLRKW--IGHPRFELI 86
+LVTGGAG+IGSH V +++ N VI VDN Y +G+K + L + I +
Sbjct: 6 VLVTGGAGYIGSHTVLEML-NAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 87 RHDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRV 138
R D+T+ + ++D + H A + P++ N+ GT +L +A
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 139 GARILLTSTSEVYGDPLVHPQDESY-WGN 166
+ + +S++ VYG+P P E + GN
Sbjct: 125 VFKFVYSSSATVYGEPKFLPVTEEHPTGN 153
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 111 (44.1 bits), Expect = 0.00072, P = 0.00072
Identities = 33/131 (25%), Positives = 60/131 (45%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK-DNLRKWIGH-PRFELIRHDVT 91
+++TGG GFIGS+ V+ + + + +D S N+ + + + PR++L+ D+
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 142
I E+D + H A + + ++ NV+ + L + G R
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRF 127
Query: 143 LLTSTSEVYGD 153
+ ST EVYGD
Sbjct: 128 VHISTDEVYGD 138
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 107 (42.7 bits), Expect = 0.00091, P = 0.00091
Identities = 39/141 (27%), Positives = 69/141 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLME-NEKNEVIVVD---------NYFTGSKDNLRKWIGHPRFE 84
+L+ GG+GF+G HL+ + + N K ++ + D FT + D+++ G +
Sbjct: 7 VLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFHKG----D 62
Query: 85 LIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
L D E + E + C ASP+ + NP NV GT N++ + K+ G IL+
Sbjct: 63 LTSPDDMENAINESKANVVVHC-ASPM-HGQNPDIYDIVNVKGTRNVIDMCKKCGVNILV 120
Query: 145 TSTSE--VYGDPLVHPQDESY 163
++S ++ VH DE++
Sbjct: 121 YTSSAGVIFNGQDVHNADETW 141
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 107 (42.7 bits), Expect = 0.00096, P = 0.00096
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI 96
V GG+GF+G H+V++L+E V V D ++ ++G +L P L
Sbjct: 30 VIGGSGFLGQHMVEQLLERGY-AVNVFDKRQGFDNPRVQFFLG----DLCNQQDLYPALK 84
Query: 97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
V ++H A PA N + N IGT N++ + G +++LTS++ V
Sbjct: 85 GVSTVFHCASPAPS---SNNKELFYRVNYIGTKNVIETCREAGVQKLILTSSASV 136
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 108 (43.1 bits), Expect = 0.00099, P = 0.00099
Identities = 34/133 (25%), Positives = 64/133 (48%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRKWI-GHPRFELIRH 88
+ +LVTG +GF+G+H V + + V+ +DN Y+ R+ + ++
Sbjct: 96 LTVLVTGASGFVGTH-VSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEG 154
Query: 89 DVTEPLLIE--VD-----QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + +L+ D + HLA A + NP + +N+ G +N+L ++K +
Sbjct: 155 DINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQ 214
Query: 142 --ILLTSTSEVYG 152
I+ S+S VYG
Sbjct: 215 PAIVWASSSSVYG 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 11 22 0.47 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 149
No. of states in DFA: 589 (63 KB)
Total size of DFA: 161 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.57u 0.16s 19.73t Elapsed: 00:00:01
Total cpu time: 19.59u 0.16s 19.75t Elapsed: 00:00:01
Start: Sat May 11 05:39:10 2013 End: Sat May 11 05:39:11 2013
WARNINGS ISSUED: 1