Query 029640
Match_columns 190
No_of_seqs 105 out of 1331
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 16:09:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029640.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029640hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 99.9 6.3E-27 1.4E-31 180.0 12.8 144 33-189 1-152 (329)
2 PLN02166 dTDP-glucose 4,6-dehy 99.9 5.3E-25 1.1E-29 182.7 16.4 154 31-188 119-272 (436)
3 PLN02206 UDP-glucuronate decar 99.9 6.4E-25 1.4E-29 182.5 16.0 154 31-188 118-271 (442)
4 PRK15181 Vi polysaccharide bio 99.9 6.9E-24 1.5E-28 171.8 15.7 150 30-188 13-174 (348)
5 KOG1502 Flavonol reductase/cin 99.9 1E-23 2.2E-28 165.7 13.1 155 31-189 5-174 (327)
6 PRK09987 dTDP-4-dehydrorhamnos 99.9 2.3E-23 5E-28 165.5 13.2 130 33-188 1-137 (299)
7 KOG1429 dTDP-glucose 4-6-dehyd 99.9 3.6E-23 7.9E-28 157.8 11.3 155 30-188 25-179 (350)
8 PRK11908 NAD-dependent epimera 99.9 3.1E-22 6.7E-27 162.0 16.2 150 32-188 1-158 (347)
9 TIGR01472 gmd GDP-mannose 4,6- 99.9 2.8E-22 6.1E-27 162.0 14.6 147 33-188 1-165 (343)
10 PF01073 3Beta_HSD: 3-beta hyd 99.9 4.2E-22 9.1E-27 156.8 13.9 143 36-188 1-155 (280)
11 PRK08125 bifunctional UDP-gluc 99.9 6.2E-22 1.3E-26 172.3 16.0 156 25-188 309-472 (660)
12 PF04321 RmlD_sub_bind: RmlD s 99.9 8.5E-23 1.8E-27 161.3 9.5 127 33-188 1-134 (286)
13 TIGR02622 CDP_4_6_dhtase CDP-g 99.9 1.3E-21 2.9E-26 158.4 16.2 150 30-188 2-161 (349)
14 COG1091 RfbD dTDP-4-dehydrorha 99.9 4.9E-22 1.1E-26 153.9 12.7 126 33-188 1-133 (281)
15 PLN02427 UDP-apiose/xylose syn 99.9 1.5E-21 3.2E-26 160.2 15.7 132 31-162 13-151 (386)
16 PLN02240 UDP-glucose 4-epimera 99.9 2.7E-21 5.8E-26 156.5 15.5 150 30-188 3-165 (352)
17 PLN02653 GDP-mannose 4,6-dehyd 99.9 1.8E-21 3.9E-26 157.1 14.3 148 31-188 5-171 (340)
18 PLN02214 cinnamoyl-CoA reducta 99.9 4.3E-21 9.3E-26 155.2 16.0 150 31-189 9-171 (342)
19 COG1088 RfbB dTDP-D-glucose 4, 99.9 2E-21 4.3E-26 149.3 13.0 148 33-188 1-161 (340)
20 PLN02572 UDP-sulfoquinovose sy 99.9 8.1E-21 1.8E-25 158.2 16.2 154 30-188 45-237 (442)
21 PLN02896 cinnamyl-alcohol dehy 99.9 8.1E-21 1.8E-25 154.1 15.1 154 31-188 9-185 (353)
22 KOG1371 UDP-glucose 4-epimeras 99.9 3.5E-21 7.6E-26 149.7 11.3 148 32-188 2-162 (343)
23 PRK10217 dTDP-glucose 4,6-dehy 99.9 1.6E-20 3.6E-25 152.2 15.4 148 32-188 1-169 (355)
24 PLN00198 anthocyanidin reducta 99.9 2.9E-20 6.3E-25 149.9 16.0 152 31-188 8-177 (338)
25 PRK10675 UDP-galactose-4-epime 99.9 2.5E-20 5.5E-25 150.1 14.9 147 33-188 1-158 (338)
26 PF01370 Epimerase: NAD depend 99.8 1.6E-20 3.4E-25 143.6 12.1 141 35-188 1-149 (236)
27 PRK10084 dTDP-glucose 4,6 dehy 99.8 3.5E-20 7.7E-25 150.1 14.5 148 33-188 1-176 (352)
28 PLN02778 3,5-epimerase/4-reduc 99.8 8.4E-20 1.8E-24 145.0 15.2 134 31-188 8-150 (298)
29 PLN02989 cinnamyl-alcohol dehy 99.8 1.2E-19 2.6E-24 145.5 16.1 153 31-188 4-173 (325)
30 PLN02986 cinnamyl-alcohol dehy 99.8 1.9E-19 4E-24 144.3 15.9 152 31-188 4-172 (322)
31 PLN02260 probable rhamnose bio 99.8 1.4E-19 3E-24 157.9 15.7 150 31-188 5-168 (668)
32 PLN02650 dihydroflavonol-4-red 99.8 1.8E-19 3.8E-24 146.1 15.3 151 32-188 5-172 (351)
33 PLN02662 cinnamyl-alcohol dehy 99.8 2.3E-19 5E-24 143.5 15.3 151 31-188 3-171 (322)
34 COG0451 WcaG Nucleoside-diphos 99.8 1.3E-19 2.8E-24 144.1 13.6 143 33-189 1-152 (314)
35 PRK11150 rfaD ADP-L-glycero-D- 99.8 7.2E-20 1.6E-24 145.7 11.8 134 35-188 2-149 (308)
36 PLN02695 GDP-D-mannose-3',5'-e 99.8 1.9E-19 4E-24 147.1 14.3 146 31-188 20-176 (370)
37 KOG1430 C-3 sterol dehydrogena 99.8 1.8E-19 3.9E-24 144.2 13.6 151 31-188 3-162 (361)
38 TIGR01214 rmlD dTDP-4-dehydror 99.8 1.6E-19 3.4E-24 142.3 13.0 126 34-188 1-133 (287)
39 TIGR01179 galE UDP-glucose-4-e 99.8 4.4E-19 9.5E-24 141.6 14.3 146 34-188 1-154 (328)
40 TIGR01181 dTDP_gluc_dehyt dTDP 99.8 6.7E-19 1.5E-23 140.0 14.5 147 34-188 1-159 (317)
41 TIGR03589 PseB UDP-N-acetylglu 99.8 1E-18 2.2E-23 140.4 14.5 136 30-188 2-144 (324)
42 TIGR03466 HpnA hopanoid-associ 99.8 1.1E-18 2.3E-23 139.7 14.2 143 33-188 1-150 (328)
43 PLN02725 GDP-4-keto-6-deoxyman 99.8 6E-19 1.3E-23 140.0 10.4 129 36-188 1-139 (306)
44 PLN02686 cinnamoyl-CoA reducta 99.8 2.2E-18 4.7E-23 140.7 13.5 156 28-188 49-225 (367)
45 PLN02583 cinnamoyl-CoA reducta 99.8 4.2E-18 9.2E-23 135.2 13.6 153 31-189 5-173 (297)
46 COG1086 Predicted nucleoside-d 99.8 3.4E-18 7.3E-23 141.8 13.1 143 24-188 242-395 (588)
47 PF07993 NAD_binding_4: Male s 99.8 1.7E-18 3.7E-23 134.2 10.1 145 37-188 1-177 (249)
48 TIGR02197 heptose_epim ADP-L-g 99.8 5.2E-18 1.1E-22 135.1 13.0 137 35-188 1-147 (314)
49 PLN02996 fatty acyl-CoA reduct 99.8 1.4E-17 3E-22 140.4 15.6 123 30-155 9-169 (491)
50 PF02719 Polysacc_synt_2: Poly 99.8 2E-18 4.2E-23 134.7 8.3 132 35-188 1-147 (293)
51 PRK07201 short chain dehydroge 99.8 2.7E-17 5.9E-22 143.2 15.3 144 33-188 1-160 (657)
52 PLN02260 probable rhamnose bio 99.7 3.4E-17 7.3E-22 143.0 14.5 133 31-188 379-521 (668)
53 TIGR01746 Thioester-redct thio 99.7 7.1E-17 1.5E-21 130.7 14.4 148 34-188 1-174 (367)
54 COG3320 Putative dehydrogenase 99.7 4.3E-17 9.2E-22 129.7 12.4 150 33-188 1-177 (382)
55 KOG0747 Putative NAD+-dependen 99.7 2.3E-17 5E-22 126.2 8.8 149 33-189 7-167 (331)
56 PRK06197 short chain dehydroge 99.7 1.1E-16 2.4E-21 127.4 13.0 152 30-188 14-187 (306)
57 PRK05854 short chain dehydroge 99.7 1.7E-16 3.8E-21 126.9 13.1 150 30-188 12-184 (313)
58 COG1089 Gmd GDP-D-mannose dehy 99.7 8.9E-17 1.9E-21 123.1 10.3 147 31-186 1-162 (345)
59 PRK07453 protochlorophyllide o 99.7 2.1E-16 4.5E-21 126.8 12.7 121 31-152 5-150 (322)
60 PLN02503 fatty acyl-CoA reduct 99.7 7.4E-16 1.6E-20 131.8 15.0 131 29-163 116-283 (605)
61 PLN02657 3,8-divinyl protochlo 99.7 1E-15 2.2E-20 125.9 14.6 122 25-152 53-187 (390)
62 TIGR01777 yfcH conserved hypot 99.7 5.7E-16 1.2E-20 122.0 12.3 123 35-163 1-128 (292)
63 PRK05717 oxidoreductase; Valid 99.7 1E-15 2.2E-20 118.8 12.7 120 29-151 7-148 (255)
64 PRK07774 short chain dehydroge 99.7 7.6E-16 1.6E-20 118.9 11.8 122 30-152 4-150 (250)
65 PRK06196 oxidoreductase; Provi 99.7 1.5E-15 3.3E-20 121.5 13.8 148 30-188 24-190 (315)
66 PRK06194 hypothetical protein; 99.7 1E-15 2.2E-20 120.7 12.3 122 30-152 4-153 (287)
67 PRK06482 short chain dehydroge 99.7 2.1E-15 4.6E-20 118.2 12.9 115 32-149 2-137 (276)
68 PLN00141 Tic62-NAD(P)-related 99.7 9E-16 2E-20 119.0 10.6 143 31-188 16-166 (251)
69 PRK07231 fabG 3-ketoacyl-(acyl 99.7 2.4E-15 5.2E-20 116.0 12.4 122 30-152 3-146 (251)
70 PLN02253 xanthoxin dehydrogena 99.6 2.3E-15 5E-20 118.3 12.4 119 30-149 16-157 (280)
71 CHL00194 ycf39 Ycf39; Provisio 99.6 1.4E-15 3E-20 121.8 11.3 106 33-149 1-112 (317)
72 COG0300 DltE Short-chain dehyd 99.6 2.1E-15 4.6E-20 116.4 11.2 122 30-152 4-148 (265)
73 PRK06180 short chain dehydroge 99.6 5.6E-15 1.2E-19 116.1 13.5 119 31-152 3-142 (277)
74 PRK09186 flagellin modificatio 99.6 5.6E-15 1.2E-19 114.4 13.2 122 30-152 2-150 (256)
75 PRK08213 gluconate 5-dehydroge 99.6 5.6E-15 1.2E-19 114.8 13.3 122 30-152 10-154 (259)
76 PRK13394 3-hydroxybutyrate deh 99.6 3.1E-15 6.6E-20 116.2 11.7 121 30-151 5-148 (262)
77 PRK07806 short chain dehydroge 99.6 2.8E-15 6.1E-20 115.6 11.4 117 30-149 4-137 (248)
78 COG4221 Short-chain alcohol de 99.6 5.5E-15 1.2E-19 111.6 12.5 117 31-149 5-142 (246)
79 PRK08263 short chain dehydroge 99.6 4.3E-15 9.3E-20 116.5 12.4 119 31-152 2-141 (275)
80 PLN03209 translocon at the inn 99.6 3.5E-15 7.6E-20 126.0 12.5 120 29-151 77-212 (576)
81 PRK12826 3-ketoacyl-(acyl-carr 99.6 3.8E-15 8.2E-20 114.8 11.7 121 30-151 4-146 (251)
82 PRK07024 short chain dehydroge 99.6 4.1E-15 8.8E-20 115.5 11.5 119 32-151 2-142 (257)
83 PRK07890 short chain dehydroge 99.6 5.7E-15 1.2E-19 114.5 12.2 121 30-151 3-145 (258)
84 PRK12827 short chain dehydroge 99.6 1.2E-14 2.7E-19 111.8 14.0 122 30-152 4-152 (249)
85 PRK07814 short chain dehydroge 99.6 7.2E-15 1.6E-19 114.6 12.5 119 30-149 8-149 (263)
86 PRK05866 short chain dehydroge 99.6 1.2E-14 2.5E-19 115.3 13.9 122 30-152 38-183 (293)
87 PRK12746 short chain dehydroge 99.6 8.6E-15 1.9E-19 113.3 12.7 121 31-152 5-152 (254)
88 PRK06138 short chain dehydroge 99.6 7.1E-15 1.5E-19 113.5 12.1 121 30-151 3-144 (252)
89 PRK12825 fabG 3-ketoacyl-(acyl 99.6 1.5E-14 3.2E-19 111.1 13.3 121 31-152 5-148 (249)
90 PRK07523 gluconate 5-dehydroge 99.6 2.2E-14 4.7E-19 111.2 14.0 119 30-149 8-148 (255)
91 PRK05993 short chain dehydroge 99.6 9.8E-15 2.1E-19 114.7 12.1 114 31-150 3-138 (277)
92 PRK06179 short chain dehydroge 99.6 2.4E-14 5.3E-19 111.8 14.0 114 31-152 3-137 (270)
93 PF13460 NAD_binding_10: NADH( 99.6 1.7E-14 3.8E-19 106.4 12.3 101 35-156 1-107 (183)
94 PRK08267 short chain dehydroge 99.6 1.7E-14 3.6E-19 112.2 12.7 116 32-149 1-138 (260)
95 PRK06914 short chain dehydroge 99.6 2.3E-14 4.9E-19 112.6 13.1 119 31-150 2-143 (280)
96 PLN00016 RNA-binding protein; 99.6 9.2E-15 2E-19 119.8 11.3 114 31-162 51-180 (378)
97 PRK12823 benD 1,6-dihydroxycyc 99.6 2.4E-14 5.2E-19 111.2 13.0 121 30-152 6-149 (260)
98 PRK06128 oxidoreductase; Provi 99.6 3E-14 6.4E-19 113.3 13.7 122 30-152 53-197 (300)
99 PRK09135 pteridine reductase; 99.6 1.6E-14 3.5E-19 111.2 11.8 138 31-188 5-165 (249)
100 PRK12429 3-hydroxybutyrate deh 99.6 2.6E-14 5.7E-19 110.6 13.0 122 30-152 2-145 (258)
101 PRK06182 short chain dehydroge 99.6 3E-14 6.4E-19 111.6 13.2 113 31-149 2-135 (273)
102 KOG1208 Dehydrogenases with di 99.6 1.4E-14 3E-19 115.3 11.3 121 29-150 32-174 (314)
103 PRK07063 short chain dehydroge 99.6 2.5E-14 5.4E-19 111.2 12.5 121 30-151 5-149 (260)
104 PRK06500 short chain dehydroge 99.6 3.2E-14 6.9E-19 109.7 13.0 116 31-149 5-139 (249)
105 PRK07478 short chain dehydroge 99.6 3.2E-14 6.9E-19 110.2 13.0 120 31-151 5-147 (254)
106 PRK05876 short chain dehydroge 99.6 2.9E-14 6.3E-19 112.1 12.9 122 30-152 4-148 (275)
107 PRK06398 aldose dehydrogenase; 99.6 6.9E-14 1.5E-18 108.8 14.9 112 30-152 4-136 (258)
108 PRK06463 fabG 3-ketoacyl-(acyl 99.6 3.4E-14 7.4E-19 110.2 12.7 118 30-152 5-143 (255)
109 KOG1205 Predicted dehydrogenas 99.6 4.2E-14 9E-19 110.1 13.1 119 30-149 10-152 (282)
110 PRK12745 3-ketoacyl-(acyl-carr 99.6 3.8E-14 8.1E-19 109.8 12.8 119 32-151 2-151 (256)
111 TIGR01963 PHB_DH 3-hydroxybuty 99.6 3.5E-14 7.7E-19 109.7 12.7 120 32-152 1-142 (255)
112 PRK10538 malonic semialdehyde 99.6 3E-14 6.6E-19 110.1 12.0 115 33-150 1-137 (248)
113 PRK08589 short chain dehydroge 99.6 5E-14 1.1E-18 110.4 13.4 120 30-151 4-145 (272)
114 PRK06523 short chain dehydroge 99.6 5.6E-14 1.2E-18 109.1 13.5 113 30-151 7-142 (260)
115 PRK08277 D-mannonate oxidoredu 99.6 4.5E-14 9.7E-19 110.8 13.0 122 30-152 8-166 (278)
116 PRK08251 short chain dehydroge 99.6 6.6E-14 1.4E-18 108.0 13.6 118 32-150 2-143 (248)
117 PRK07985 oxidoreductase; Provi 99.6 1.4E-13 2.9E-18 109.3 15.7 122 30-152 47-191 (294)
118 TIGR03206 benzo_BadH 2-hydroxy 99.6 2.7E-14 5.9E-19 110.1 11.4 122 31-153 2-145 (250)
119 PRK08063 enoyl-(acyl carrier p 99.6 5.2E-14 1.1E-18 108.6 12.8 121 30-151 2-145 (250)
120 PRK08643 acetoin reductase; Va 99.6 3.9E-14 8.6E-19 109.8 12.1 118 32-150 2-142 (256)
121 PRK05872 short chain dehydroge 99.6 5E-14 1.1E-18 111.8 12.8 122 30-152 7-148 (296)
122 PRK07326 short chain dehydroge 99.6 4E-14 8.7E-19 108.4 11.7 120 31-151 5-144 (237)
123 PRK05875 short chain dehydroge 99.6 4.2E-14 9.1E-19 110.8 12.0 121 30-151 5-150 (276)
124 TIGR01832 kduD 2-deoxy-D-gluco 99.6 4E-14 8.6E-19 109.2 11.7 120 30-152 3-145 (248)
125 PRK07035 short chain dehydroge 99.6 6.3E-14 1.4E-18 108.4 12.8 119 30-149 6-147 (252)
126 PRK08642 fabG 3-ketoacyl-(acyl 99.6 4.5E-14 9.8E-19 109.1 11.9 117 31-149 4-148 (253)
127 PRK07775 short chain dehydroge 99.6 6.9E-14 1.5E-18 109.7 12.9 121 31-152 9-151 (274)
128 PRK06181 short chain dehydroge 99.6 8.6E-14 1.9E-18 108.3 13.3 120 32-152 1-142 (263)
129 TIGR01289 LPOR light-dependent 99.6 9.5E-14 2.1E-18 111.1 13.8 121 31-152 2-148 (314)
130 TIGR03443 alpha_am_amid L-amin 99.6 8.7E-14 1.9E-18 130.1 15.6 150 32-188 971-1159(1389)
131 PRK08945 putative oxoacyl-(acy 99.6 5.7E-14 1.2E-18 108.4 12.0 120 30-150 10-155 (247)
132 PRK07856 short chain dehydroge 99.6 8E-14 1.7E-18 107.9 12.8 114 30-151 4-139 (252)
133 PRK08339 short chain dehydroge 99.6 8.6E-14 1.9E-18 108.6 13.0 121 30-151 6-148 (263)
134 PRK08264 short chain dehydroge 99.6 1E-13 2.2E-18 106.2 13.2 115 31-152 5-138 (238)
135 PRK06701 short chain dehydroge 99.6 9.1E-14 2E-18 110.1 13.3 123 30-153 44-188 (290)
136 PRK08265 short chain dehydroge 99.6 1E-13 2.2E-18 108.0 13.3 118 30-150 4-140 (261)
137 PRK07067 sorbitol dehydrogenas 99.6 6.6E-14 1.4E-18 108.6 12.2 116 31-149 5-142 (257)
138 PRK08219 short chain dehydroge 99.6 4.9E-14 1.1E-18 107.1 11.2 117 31-152 2-134 (227)
139 PRK12935 acetoacetyl-CoA reduc 99.6 1.4E-13 2.9E-18 106.1 13.4 120 31-151 5-147 (247)
140 COG1090 Predicted nucleoside-d 99.6 4.8E-14 1E-18 108.0 10.6 121 35-163 1-127 (297)
141 PRK07666 fabG 3-ketoacyl-(acyl 99.6 8.2E-14 1.8E-18 106.9 12.1 121 31-152 6-148 (239)
142 PRK07102 short chain dehydroge 99.5 8.9E-14 1.9E-18 107.0 12.3 117 32-149 1-137 (243)
143 PRK08628 short chain dehydroge 99.5 8.8E-14 1.9E-18 107.9 12.3 120 30-151 5-144 (258)
144 PRK06935 2-deoxy-D-gluconate 3 99.5 8.9E-14 1.9E-18 108.0 12.3 120 30-152 13-155 (258)
145 PRK06841 short chain dehydroge 99.5 2.4E-13 5.2E-18 105.2 14.6 118 30-150 13-151 (255)
146 PRK12742 oxidoreductase; Provi 99.5 2E-13 4.3E-18 104.5 14.0 116 30-149 4-134 (237)
147 PRK05653 fabG 3-ketoacyl-(acyl 99.5 1.4E-13 3.1E-18 105.5 13.2 119 31-150 4-144 (246)
148 PRK06113 7-alpha-hydroxysteroi 99.5 1.5E-13 3.2E-18 106.6 13.3 119 30-149 9-148 (255)
149 PRK07825 short chain dehydroge 99.5 1.6E-13 3.4E-18 107.4 13.6 118 30-151 3-141 (273)
150 PRK12481 2-deoxy-D-gluconate 3 99.5 7.7E-14 1.7E-18 108.1 11.6 120 30-152 6-148 (251)
151 PRK09134 short chain dehydroge 99.5 2.1E-13 4.6E-18 105.9 14.0 119 31-150 8-149 (258)
152 PRK12384 sorbitol-6-phosphate 99.5 2.1E-13 4.6E-18 105.8 14.0 117 32-149 2-143 (259)
153 PRK09242 tropinone reductase; 99.5 1.3E-13 2.7E-18 107.0 12.7 122 30-152 7-152 (257)
154 PRK07454 short chain dehydroge 99.5 1.1E-13 2.3E-18 106.4 12.2 121 31-152 5-147 (241)
155 PRK12747 short chain dehydroge 99.5 1.4E-13 3.1E-18 106.4 13.0 121 30-151 2-149 (252)
156 PRK07577 short chain dehydroge 99.5 1.5E-13 3.2E-18 105.1 12.8 111 31-152 2-132 (234)
157 PRK07097 gluconate 5-dehydroge 99.5 1.2E-13 2.5E-18 107.8 12.4 119 30-149 8-148 (265)
158 PRK06200 2,3-dihydroxy-2,3-dih 99.5 8.2E-14 1.8E-18 108.5 11.5 120 30-152 4-148 (263)
159 PRK09291 short chain dehydroge 99.5 9.4E-14 2E-18 107.6 11.8 117 32-149 2-134 (257)
160 PRK06171 sorbitol-6-phosphate 99.5 2.1E-13 4.4E-18 106.4 13.7 113 30-151 7-149 (266)
161 PRK08085 gluconate 5-dehydroge 99.5 3.1E-13 6.8E-18 104.7 14.5 119 30-149 7-147 (254)
162 PRK12829 short chain dehydroge 99.5 1.6E-13 3.4E-18 106.6 12.8 118 30-149 9-149 (264)
163 PRK05650 short chain dehydroge 99.5 2.2E-13 4.7E-18 106.6 13.6 119 33-152 1-141 (270)
164 PRK12936 3-ketoacyl-(acyl-carr 99.5 1.4E-13 3E-18 105.8 12.3 118 30-150 4-142 (245)
165 PRK08226 short chain dehydroge 99.5 2.7E-13 5.9E-18 105.4 14.1 118 30-149 4-143 (263)
166 PRK12937 short chain dehydroge 99.5 1.5E-13 3.2E-18 105.7 12.5 121 30-151 3-144 (245)
167 PRK07904 short chain dehydroge 99.5 3.5E-13 7.5E-18 104.7 14.6 119 31-149 7-148 (253)
168 PRK12939 short chain dehydroge 99.5 1.4E-13 3E-18 106.1 12.3 121 30-151 5-147 (250)
169 PRK06077 fabG 3-ketoacyl-(acyl 99.5 2.5E-13 5.3E-18 104.9 13.6 121 31-152 5-146 (252)
170 PRK08993 2-deoxy-D-gluconate 3 99.5 1.2E-13 2.6E-18 107.1 11.9 120 30-152 8-150 (253)
171 PRK05557 fabG 3-ketoacyl-(acyl 99.5 2.5E-13 5.4E-18 104.3 13.4 119 30-149 3-144 (248)
172 PRK07677 short chain dehydroge 99.5 1.4E-13 3.1E-18 106.5 12.0 118 32-150 1-141 (252)
173 PLN02780 ketoreductase/ oxidor 99.5 1.6E-13 3.4E-18 110.2 12.5 120 31-151 52-197 (320)
174 PRK08278 short chain dehydroge 99.5 4.9E-13 1.1E-17 104.9 15.1 118 30-148 4-150 (273)
175 PRK06172 short chain dehydroge 99.5 2.3E-13 4.9E-18 105.3 13.0 122 30-152 5-149 (253)
176 PRK12828 short chain dehydroge 99.5 1.2E-13 2.7E-18 105.5 11.3 122 30-153 5-147 (239)
177 PRK06114 short chain dehydroge 99.5 3.4E-13 7.4E-18 104.6 13.7 121 30-151 6-149 (254)
178 PRK07074 short chain dehydroge 99.5 2.9E-13 6.3E-18 105.0 13.2 116 32-149 2-138 (257)
179 PRK07576 short chain dehydroge 99.5 2.4E-13 5.3E-18 106.1 12.8 120 30-150 7-147 (264)
180 PRK06124 gluconate 5-dehydroge 99.5 3.2E-13 6.9E-18 104.7 13.3 121 30-151 9-151 (256)
181 TIGR03325 BphB_TodD cis-2,3-di 99.5 2E-13 4.4E-18 106.3 12.1 119 30-151 3-146 (262)
182 PRK12367 short chain dehydroge 99.5 4.3E-13 9.4E-18 103.8 13.7 104 28-136 10-119 (245)
183 PRK07060 short chain dehydroge 99.5 3.9E-13 8.5E-18 103.3 13.5 118 30-152 7-142 (245)
184 PRK12743 oxidoreductase; Provi 99.5 2.6E-13 5.6E-18 105.3 12.6 117 32-149 2-142 (256)
185 PF00106 adh_short: short chai 99.5 1.6E-13 3.4E-18 99.6 10.6 119 33-151 1-139 (167)
186 PRK07792 fabG 3-ketoacyl-(acyl 99.5 3.1E-13 6.8E-18 107.8 13.2 121 30-151 10-159 (306)
187 PRK12320 hypothetical protein; 99.5 1.2E-13 2.6E-18 119.7 11.5 99 33-148 1-103 (699)
188 PRK12748 3-ketoacyl-(acyl-carr 99.5 3.9E-13 8.5E-18 104.3 13.3 122 30-152 3-159 (256)
189 PRK05867 short chain dehydroge 99.5 2.7E-13 5.8E-18 105.0 12.4 119 30-149 7-148 (253)
190 PRK06123 short chain dehydroge 99.5 3.4E-13 7.5E-18 103.9 12.9 118 32-150 2-146 (248)
191 PRK05565 fabG 3-ketoacyl-(acyl 99.5 1.8E-13 3.8E-18 105.2 11.2 122 30-152 3-147 (247)
192 KOG2774 NAD dependent epimeras 99.5 1.3E-14 2.7E-19 108.8 4.5 145 31-190 43-195 (366)
193 PRK09072 short chain dehydroge 99.5 4.8E-13 1E-17 104.2 13.6 120 30-150 3-142 (263)
194 PRK12744 short chain dehydroge 99.5 5.2E-13 1.1E-17 103.6 13.7 117 30-147 6-146 (257)
195 PRK07109 short chain dehydroge 99.5 3.3E-13 7.1E-18 108.9 12.9 122 30-152 6-149 (334)
196 PRK08936 glucose-1-dehydrogena 99.5 4.3E-13 9.3E-18 104.3 12.9 119 30-149 5-147 (261)
197 PRK08703 short chain dehydroge 99.5 3.9E-13 8.5E-18 103.2 12.5 119 30-149 4-149 (239)
198 PRK06057 short chain dehydroge 99.5 2E-13 4.3E-18 105.9 10.9 118 30-152 5-146 (255)
199 PRK06483 dihydromonapterin red 99.5 3E-13 6.6E-18 103.6 11.8 113 32-149 2-137 (236)
200 PRK06949 short chain dehydroge 99.5 2.7E-13 5.9E-18 105.0 11.6 121 30-151 7-157 (258)
201 PRK07062 short chain dehydroge 99.5 4.8E-13 1.1E-17 104.2 13.0 121 30-151 6-150 (265)
202 PRK07023 short chain dehydroge 99.5 1.7E-13 3.7E-18 105.5 10.2 115 32-151 1-141 (243)
203 PRK06101 short chain dehydroge 99.5 2.6E-13 5.6E-18 104.4 11.1 114 32-149 1-130 (240)
204 PRK08220 2,3-dihydroxybenzoate 99.5 5.6E-13 1.2E-17 103.0 12.9 112 30-150 6-138 (252)
205 PRK05693 short chain dehydroge 99.5 3.4E-13 7.3E-18 105.7 11.8 113 32-150 1-133 (274)
206 PRK12824 acetoacetyl-CoA reduc 99.5 7.5E-13 1.6E-17 101.7 13.5 119 33-152 3-144 (245)
207 PRK06947 glucose-1-dehydrogena 99.5 5.8E-13 1.3E-17 102.7 12.9 118 32-150 2-146 (248)
208 PRK07791 short chain dehydroge 99.5 5.5E-13 1.2E-17 105.4 13.0 120 30-150 4-160 (286)
209 TIGR02415 23BDH acetoin reduct 99.5 2.9E-13 6.3E-18 104.6 11.3 117 33-150 1-140 (254)
210 PRK08217 fabG 3-ketoacyl-(acyl 99.5 5.5E-13 1.2E-17 102.8 12.6 122 30-152 3-156 (253)
211 PRK12938 acetyacetyl-CoA reduc 99.5 4.8E-13 1E-17 103.0 12.2 118 31-149 2-142 (246)
212 PRK08340 glucose-1-dehydrogena 99.5 4.6E-13 9.9E-18 104.1 12.1 118 33-151 1-142 (259)
213 PRK05855 short chain dehydroge 99.5 6.3E-13 1.4E-17 114.0 13.8 122 30-152 313-457 (582)
214 PRK06079 enoyl-(acyl carrier p 99.5 3.4E-13 7.5E-18 104.6 11.0 117 30-149 5-146 (252)
215 PRK06139 short chain dehydroge 99.5 5E-13 1.1E-17 107.7 12.2 120 31-151 6-147 (330)
216 PRK06550 fabG 3-ketoacyl-(acyl 99.5 8.8E-13 1.9E-17 100.9 12.9 113 30-151 3-131 (235)
217 PRK07041 short chain dehydroge 99.5 4.4E-13 9.4E-18 102.3 11.0 116 36-152 1-129 (230)
218 PRK09730 putative NAD(P)-bindi 99.5 6.6E-13 1.4E-17 102.1 12.0 119 32-151 1-146 (247)
219 PRK08416 7-alpha-hydroxysteroi 99.5 9.4E-13 2E-17 102.5 13.0 119 30-149 6-154 (260)
220 KOG1201 Hydroxysteroid 17-beta 99.5 1.5E-12 3.3E-17 101.0 13.8 119 30-149 36-175 (300)
221 PRK06940 short chain dehydroge 99.5 1.6E-12 3.4E-17 102.2 14.0 114 32-151 2-130 (275)
222 PRK07533 enoyl-(acyl carrier p 99.5 1.4E-12 3.1E-17 101.5 13.3 118 30-149 8-151 (258)
223 KOG2865 NADH:ubiquinone oxidor 99.5 1.8E-13 3.8E-18 105.3 7.4 115 30-149 59-179 (391)
224 PRK06484 short chain dehydroge 99.5 7.3E-13 1.6E-17 112.7 12.0 119 30-151 267-405 (520)
225 PRK07831 short chain dehydroge 99.5 2.7E-12 5.7E-17 99.9 14.1 121 28-149 13-159 (262)
226 PRK07201 short chain dehydroge 99.5 8E-13 1.7E-17 115.3 12.3 122 30-152 369-514 (657)
227 PRK08017 oxidoreductase; Provi 99.5 1.6E-12 3.6E-17 100.6 12.5 111 33-149 3-135 (256)
228 PRK07069 short chain dehydroge 99.5 1.3E-12 2.8E-17 100.7 11.9 119 34-153 1-144 (251)
229 PRK06198 short chain dehydroge 99.5 8.5E-13 1.8E-17 102.4 10.8 122 30-152 4-149 (260)
230 PRK05865 hypothetical protein; 99.4 6.6E-13 1.4E-17 117.3 11.3 98 33-148 1-104 (854)
231 PRK06505 enoyl-(acyl carrier p 99.4 1.3E-12 2.8E-17 102.5 11.4 118 30-149 5-148 (271)
232 PRK08177 short chain dehydroge 99.4 1.5E-12 3.3E-17 99.1 11.3 112 32-148 1-132 (225)
233 PRK08324 short chain dehydroge 99.4 1.4E-12 3.1E-17 114.2 12.4 121 30-151 420-562 (681)
234 TIGR02632 RhaD_aldol-ADH rhamn 99.4 2.4E-12 5.2E-17 112.6 13.6 120 30-150 412-556 (676)
235 PRK06953 short chain dehydroge 99.4 1.8E-12 4E-17 98.5 11.4 112 32-149 1-132 (222)
236 PRK08159 enoyl-(acyl carrier p 99.4 3.3E-12 7.2E-17 100.2 13.2 118 30-149 8-151 (272)
237 PRK06125 short chain dehydroge 99.4 2.1E-12 4.6E-17 100.3 12.0 119 30-149 5-142 (259)
238 TIGR01829 AcAcCoA_reduct aceto 99.4 3.4E-12 7.5E-17 97.8 13.0 116 33-149 1-139 (242)
239 TIGR01830 3oxo_ACP_reduc 3-oxo 99.4 1.8E-12 3.9E-17 99.1 11.3 117 35-152 1-141 (239)
240 PRK05786 fabG 3-ketoacyl-(acyl 99.4 2.7E-12 5.9E-17 98.3 12.3 118 31-149 4-138 (238)
241 PRK07889 enoyl-(acyl carrier p 99.4 4E-12 8.7E-17 98.9 13.3 116 30-147 5-146 (256)
242 PRK08415 enoyl-(acyl carrier p 99.4 3.2E-12 6.9E-17 100.5 12.6 117 30-149 3-146 (274)
243 PRK05884 short chain dehydroge 99.4 4.5E-12 9.7E-17 96.7 13.0 112 33-149 1-133 (223)
244 PRK06924 short chain dehydroge 99.4 1.5E-12 3.2E-17 100.6 10.4 117 32-150 1-144 (251)
245 PLN00015 protochlorophyllide r 99.4 1.7E-12 3.8E-17 103.5 11.0 115 36-151 1-141 (308)
246 PRK08690 enoyl-(acyl carrier p 99.4 2.4E-12 5.2E-17 100.4 11.4 119 30-150 4-150 (261)
247 COG3967 DltE Short-chain dehyd 99.4 1E-12 2.2E-17 96.6 8.5 120 30-153 3-145 (245)
248 PRK07984 enoyl-(acyl carrier p 99.4 5.9E-12 1.3E-16 98.4 13.4 118 30-149 4-148 (262)
249 PRK07832 short chain dehydroge 99.4 4.4E-12 9.6E-17 99.3 12.8 117 33-150 1-141 (272)
250 PRK08594 enoyl-(acyl carrier p 99.4 9.7E-12 2.1E-16 96.8 14.3 118 30-149 5-150 (257)
251 PRK06603 enoyl-(acyl carrier p 99.4 5.3E-12 1.2E-16 98.4 12.8 118 30-149 6-149 (260)
252 TIGR01831 fabG_rel 3-oxoacyl-( 99.4 5.2E-12 1.1E-16 96.8 12.4 115 35-150 1-139 (239)
253 PRK06484 short chain dehydroge 99.4 3E-12 6.4E-17 109.0 11.9 118 31-151 4-145 (520)
254 TIGR02685 pter_reduc_Leis pter 99.4 6.2E-12 1.3E-16 98.2 12.8 103 33-136 2-138 (267)
255 PRK07424 bifunctional sterol d 99.4 6.5E-12 1.4E-16 103.4 13.2 104 30-136 176-285 (406)
256 PRK07370 enoyl-(acyl carrier p 99.4 6.8E-12 1.5E-16 97.7 12.0 119 30-149 4-150 (258)
257 PRK08303 short chain dehydroge 99.4 1.5E-11 3.3E-16 98.1 13.9 119 30-149 6-161 (305)
258 PRK08261 fabG 3-ketoacyl-(acyl 99.4 1.2E-11 2.6E-16 103.6 13.3 119 30-151 208-347 (450)
259 PRK06997 enoyl-(acyl carrier p 99.4 1E-11 2.2E-16 96.9 11.6 118 30-149 4-148 (260)
260 PRK12859 3-ketoacyl-(acyl-carr 99.4 2.4E-11 5.2E-16 94.4 13.5 119 30-149 4-157 (256)
261 smart00822 PKS_KR This enzymat 99.4 1.5E-11 3.2E-16 89.3 11.3 118 33-150 1-139 (180)
262 PRK05599 hypothetical protein; 99.4 1.6E-11 3.4E-16 95.0 12.0 116 33-150 1-140 (246)
263 KOG1221 Acyl-CoA reductase [Li 99.3 1.6E-11 3.4E-16 101.4 12.2 119 30-151 10-159 (467)
264 KOG1200 Mitochondrial/plastidi 99.3 4.9E-12 1.1E-16 92.4 8.2 118 31-149 13-153 (256)
265 PRK07578 short chain dehydroge 99.3 2.1E-11 4.5E-16 91.2 12.0 99 33-149 1-114 (199)
266 KOG0725 Reductases with broad 99.3 2.9E-11 6.3E-16 94.7 13.2 121 30-151 6-154 (270)
267 PRK09009 C factor cell-cell si 99.3 4.9E-11 1.1E-15 91.2 13.6 108 33-147 1-132 (235)
268 COG1028 FabG Dehydrogenases wi 99.3 4.1E-11 8.9E-16 92.5 13.3 121 30-151 3-147 (251)
269 TIGR01500 sepiapter_red sepiap 99.3 2E-11 4.3E-16 94.8 11.3 118 34-151 2-155 (256)
270 KOG4169 15-hydroxyprostaglandi 99.3 1E-11 2.2E-16 92.7 7.9 115 30-149 3-139 (261)
271 PRK08862 short chain dehydroge 99.3 4.3E-11 9.2E-16 91.6 11.4 118 30-148 3-145 (227)
272 PF08659 KR: KR domain; Inter 99.3 4.6E-11 1E-15 88.3 10.5 121 34-154 2-144 (181)
273 KOG1431 GDP-L-fucose synthetas 99.3 1.6E-11 3.4E-16 91.8 7.6 130 32-183 1-140 (315)
274 KOG1372 GDP-mannose 4,6 dehydr 99.2 4.3E-11 9.2E-16 90.6 8.8 146 32-186 28-191 (376)
275 KOG1611 Predicted short chain- 99.2 2E-10 4.3E-15 85.8 11.5 118 32-149 3-157 (249)
276 PLN02730 enoyl-[acyl-carrier-p 99.2 2.1E-10 4.6E-15 91.3 12.5 118 30-149 7-181 (303)
277 TIGR03649 ergot_EASG ergot alk 99.2 8.3E-11 1.8E-15 92.7 9.8 96 34-151 1-109 (285)
278 COG2910 Putative NADH-flavin r 99.1 1.6E-09 3.4E-14 78.7 11.9 103 33-151 1-109 (211)
279 PRK06720 hypothetical protein; 99.1 1E-09 2.3E-14 80.2 11.0 79 30-109 14-105 (169)
280 TIGR02813 omega_3_PfaA polyket 99.1 4.3E-10 9.2E-15 109.0 11.3 122 29-150 1994-2179(2582)
281 KOG1210 Predicted 3-ketosphing 99.0 1.6E-09 3.4E-14 84.8 8.5 116 33-149 34-174 (331)
282 KOG1610 Corticosteroid 11-beta 99.0 7.2E-09 1.6E-13 81.2 11.6 117 31-149 28-167 (322)
283 PF05368 NmrA: NmrA-like famil 99.0 7.4E-09 1.6E-13 79.3 10.0 97 35-147 1-102 (233)
284 KOG1209 1-Acyl dihydroxyaceton 98.9 4.5E-09 9.8E-14 78.1 7.9 116 32-152 7-144 (289)
285 PRK06300 enoyl-(acyl carrier p 98.9 1.4E-08 3E-13 80.8 11.0 119 30-149 6-180 (299)
286 PF13561 adh_short_C2: Enoyl-( 98.9 3.9E-09 8.5E-14 81.2 7.1 110 39-149 1-136 (241)
287 PTZ00325 malate dehydrogenase; 98.9 4.5E-08 9.8E-13 78.4 12.0 116 30-149 6-127 (321)
288 PRK08309 short chain dehydroge 98.9 7.9E-09 1.7E-13 76.1 7.0 98 33-150 1-115 (177)
289 KOG1014 17 beta-hydroxysteroid 98.9 9.3E-09 2E-13 80.4 7.5 117 32-149 49-189 (312)
290 KOG4039 Serine/threonine kinas 98.9 5E-09 1.1E-13 75.7 5.5 118 27-153 13-137 (238)
291 KOG1207 Diacetyl reductase/L-x 98.8 1.3E-09 2.8E-14 78.6 1.9 117 30-149 5-139 (245)
292 PRK12428 3-alpha-hydroxysteroi 98.8 1.2E-08 2.5E-13 78.7 6.2 91 48-153 1-103 (241)
293 KOG1203 Predicted dehydrogenas 98.7 1.4E-07 3E-12 77.1 9.5 117 30-150 77-204 (411)
294 COG0702 Predicted nucleoside-d 98.7 1.6E-07 3.6E-12 73.1 9.5 104 33-150 1-110 (275)
295 cd01336 MDH_cytoplasmic_cytoso 98.6 6.6E-07 1.4E-11 72.0 11.3 111 33-147 3-129 (325)
296 PLN00106 malate dehydrogenase 98.5 2.5E-06 5.4E-11 68.5 13.0 113 31-147 17-135 (323)
297 COG1748 LYS9 Saccharopine dehy 98.5 3.5E-07 7.5E-12 74.6 8.2 94 32-146 1-99 (389)
298 KOG1199 Short-chain alcohol de 98.5 2.2E-07 4.9E-12 67.1 4.3 120 30-152 7-159 (260)
299 KOG1478 3-keto sterol reductas 98.4 1E-06 2.2E-11 67.3 7.7 120 31-150 2-178 (341)
300 PRK09620 hypothetical protein; 98.4 8.4E-07 1.8E-11 67.9 7.2 75 31-109 2-99 (229)
301 PRK05086 malate dehydrogenase; 98.4 8.3E-06 1.8E-10 65.4 13.0 112 33-147 1-118 (312)
302 PF00056 Ldh_1_N: lactate/mala 98.4 1.2E-05 2.6E-10 57.1 11.1 113 33-147 1-119 (141)
303 PF03435 Saccharop_dh: Sacchar 98.4 1.2E-06 2.6E-11 72.2 6.8 90 35-144 1-96 (386)
304 KOG1204 Predicted dehydrogenas 98.3 6.7E-07 1.5E-11 67.2 3.6 117 31-149 5-147 (253)
305 PRK06732 phosphopantothenate-- 98.2 5.5E-06 1.2E-10 63.5 7.1 64 39-109 23-93 (229)
306 PF01118 Semialdhyde_dh: Semia 98.2 3.3E-05 7.2E-10 53.2 10.1 95 34-147 1-98 (121)
307 cd00704 MDH Malate dehydrogena 98.2 1.9E-05 4.2E-10 63.5 9.9 110 34-147 2-127 (323)
308 PLN02968 Probable N-acetyl-gam 98.2 2.6E-05 5.6E-10 64.1 10.8 104 31-154 37-142 (381)
309 PRK14106 murD UDP-N-acetylmura 98.2 1.7E-05 3.7E-10 66.6 9.6 76 30-108 3-79 (450)
310 cd01078 NAD_bind_H4MPT_DH NADP 98.1 8E-06 1.7E-10 60.9 6.4 76 30-106 26-106 (194)
311 PRK05579 bifunctional phosphop 98.0 1.8E-05 3.9E-10 65.4 7.5 69 30-109 186-279 (399)
312 cd05294 LDH-like_MDH_nadp A la 98.0 0.00015 3.2E-09 58.1 12.3 112 33-148 1-123 (309)
313 PRK13656 trans-2-enoyl-CoA red 98.0 2.7E-05 5.9E-10 63.6 8.0 76 31-108 40-142 (398)
314 PRK14982 acyl-ACP reductase; P 98.0 9.8E-06 2.1E-10 65.4 5.0 74 30-109 153-227 (340)
315 PF01488 Shikimate_DH: Shikima 98.0 2.1E-05 4.6E-10 55.3 6.2 78 30-109 10-87 (135)
316 TIGR01758 MDH_euk_cyt malate d 98.0 0.00014 3E-09 58.6 11.4 112 34-147 1-126 (324)
317 cd05291 HicDH_like L-2-hydroxy 97.9 0.00016 3.4E-09 57.9 11.1 110 33-147 1-118 (306)
318 PRK14874 aspartate-semialdehyd 97.9 5.9E-05 1.3E-09 61.1 8.7 70 32-107 1-73 (334)
319 TIGR00715 precor6x_red precorr 97.9 5.8E-05 1.3E-09 58.8 8.1 89 33-143 1-96 (256)
320 PRK00066 ldh L-lactate dehydro 97.9 0.00034 7.5E-09 56.2 12.5 112 31-147 5-123 (315)
321 PRK08664 aspartate-semialdehyd 97.9 0.00013 2.8E-09 59.5 9.9 99 31-149 2-110 (349)
322 PRK00436 argC N-acetyl-gamma-g 97.8 0.00014 3.1E-09 59.1 9.2 99 32-151 2-104 (343)
323 KOG2733 Uncharacterized membra 97.8 2.9E-05 6.3E-10 62.1 4.8 76 34-109 7-95 (423)
324 TIGR01850 argC N-acetyl-gamma- 97.8 0.00015 3.2E-09 59.0 8.6 99 33-151 1-104 (346)
325 cd01337 MDH_glyoxysomal_mitoch 97.8 0.00066 1.4E-08 54.4 12.0 112 33-148 1-119 (310)
326 TIGR02114 coaB_strep phosphopa 97.8 6.6E-05 1.4E-09 57.5 5.8 83 37-131 19-115 (227)
327 cd01338 MDH_choloroplast_like 97.7 0.00088 1.9E-08 54.0 11.8 111 33-147 3-129 (322)
328 COG0039 Mdh Malate/lactate deh 97.7 0.00069 1.5E-08 54.0 11.0 112 33-147 1-119 (313)
329 PRK05671 aspartate-semialdehyd 97.7 0.00023 5.1E-09 57.6 7.9 97 31-150 3-101 (336)
330 PRK12475 thiamine/molybdopteri 97.6 0.0006 1.3E-08 55.3 10.1 105 30-152 22-154 (338)
331 PRK02472 murD UDP-N-acetylmura 97.6 0.00064 1.4E-08 57.1 10.4 76 31-109 4-80 (447)
332 PF01113 DapB_N: Dihydrodipico 97.6 0.00042 9.1E-09 48.0 7.7 95 33-147 1-99 (124)
333 PLN02383 aspartate semialdehyd 97.6 0.00055 1.2E-08 55.6 9.4 97 31-152 6-106 (344)
334 PRK12548 shikimate 5-dehydroge 97.6 0.00027 5.8E-09 56.1 6.8 76 31-108 125-210 (289)
335 PLN00112 malate dehydrogenase 97.5 0.002 4.3E-08 54.0 11.9 111 33-147 101-227 (444)
336 TIGR00978 asd_EA aspartate-sem 97.5 0.00069 1.5E-08 55.1 9.1 101 33-151 1-109 (341)
337 COG0002 ArgC Acetylglutamate s 97.5 0.00056 1.2E-08 54.9 7.9 99 32-149 2-104 (349)
338 TIGR01759 MalateDH-SF1 malate 97.5 0.0027 5.9E-08 51.2 11.9 111 33-147 4-130 (323)
339 TIGR00521 coaBC_dfp phosphopan 97.5 6.4E-05 1.4E-09 62.0 2.5 70 30-110 183-278 (390)
340 TIGR01757 Malate-DH_plant mala 97.5 0.0018 3.9E-08 53.3 10.8 111 33-147 45-171 (387)
341 PRK07688 thiamine/molybdopteri 97.5 0.0016 3.4E-08 52.9 10.3 106 30-153 22-155 (339)
342 PF00899 ThiF: ThiF family; I 97.5 0.0017 3.7E-08 45.5 9.2 103 32-152 2-130 (135)
343 KOG4288 Predicted oxidoreducta 97.5 0.00041 9E-09 52.6 6.2 106 31-147 51-162 (283)
344 PRK06223 malate dehydrogenase; 97.4 0.0037 7.9E-08 50.0 12.1 111 32-147 2-120 (307)
345 cd05292 LDH_2 A subgroup of L- 97.4 0.0039 8.5E-08 50.0 12.2 110 33-147 1-117 (308)
346 TIGR01772 MDH_euk_gproteo mala 97.4 0.0031 6.6E-08 50.6 11.4 110 34-147 1-117 (312)
347 TIGR02356 adenyl_thiF thiazole 97.4 0.0021 4.5E-08 48.4 9.9 105 30-152 19-149 (202)
348 COG0623 FabI Enoyl-[acyl-carri 97.4 0.0013 2.9E-08 49.9 8.4 79 29-109 3-96 (259)
349 TIGR01296 asd_B aspartate-semi 97.4 0.00049 1.1E-08 55.9 6.7 68 34-107 1-71 (339)
350 cd05290 LDH_3 A subgroup of L- 97.4 0.0053 1.2E-07 49.2 12.3 109 34-147 1-120 (307)
351 cd05293 LDH_1 A subgroup of L- 97.4 0.0042 9.2E-08 49.9 11.7 111 32-147 3-121 (312)
352 cd01491 Ube1_repeat1 Ubiquitin 97.4 0.0033 7.2E-08 49.7 10.9 105 31-153 18-144 (286)
353 cd01483 E1_enzyme_family Super 97.4 0.0045 9.8E-08 43.7 10.6 100 34-151 1-126 (143)
354 PRK05442 malate dehydrogenase; 97.4 0.004 8.6E-08 50.3 11.4 113 31-147 3-131 (326)
355 PRK08040 putative semialdehyde 97.4 0.0019 4.2E-08 52.3 9.5 97 31-151 3-102 (336)
356 PLN02602 lactate dehydrogenase 97.4 0.0059 1.3E-07 49.8 12.3 110 33-147 38-155 (350)
357 PF04127 DFP: DNA / pantothena 97.3 0.00097 2.1E-08 49.4 7.0 70 31-109 2-94 (185)
358 cd01485 E1-1_like Ubiquitin ac 97.3 0.0048 1E-07 46.3 10.4 106 30-153 17-152 (198)
359 PRK01438 murD UDP-N-acetylmura 97.3 0.004 8.7E-08 52.8 11.1 76 30-108 14-89 (480)
360 cd01492 Aos1_SUMO Ubiquitin ac 97.3 0.0052 1.1E-07 46.0 10.5 106 30-153 19-149 (197)
361 smart00859 Semialdhyde_dh Semi 97.3 0.0045 9.7E-08 42.5 9.4 70 34-106 1-74 (122)
362 PRK00258 aroE shikimate 5-dehy 97.3 0.0011 2.3E-08 52.4 6.9 75 30-108 121-196 (278)
363 PRK06718 precorrin-2 dehydroge 97.2 0.003 6.5E-08 47.5 8.9 71 30-105 8-78 (202)
364 PRK00048 dihydrodipicolinate r 97.2 0.0034 7.4E-08 49.0 9.4 32 33-64 2-33 (257)
365 TIGR00507 aroE shikimate 5-deh 97.2 0.0012 2.6E-08 51.8 6.9 74 31-108 116-189 (270)
366 cd00650 LDH_MDH_like NAD-depen 97.2 0.0054 1.2E-07 48.0 10.5 110 35-147 1-120 (263)
367 cd00300 LDH_like L-lactate deh 97.2 0.0066 1.4E-07 48.5 10.9 108 35-147 1-116 (300)
368 PRK11863 N-acetyl-gamma-glutam 97.2 0.0023 4.9E-08 51.3 8.2 83 32-149 2-84 (313)
369 cd00757 ThiF_MoeB_HesA_family 97.2 0.0041 8.9E-08 47.6 9.3 105 30-152 19-149 (228)
370 TIGR01763 MalateDH_bact malate 97.2 0.0059 1.3E-07 48.9 10.5 110 33-147 2-119 (305)
371 COG0289 DapB Dihydrodipicolina 97.2 0.0063 1.4E-07 47.2 10.0 94 32-143 2-97 (266)
372 PTZ00117 malate dehydrogenase; 97.2 0.0082 1.8E-07 48.4 11.2 112 31-147 4-123 (319)
373 PRK06728 aspartate-semialdehyd 97.2 0.0035 7.7E-08 50.9 9.0 97 31-151 4-104 (347)
374 PTZ00082 L-lactate dehydrogena 97.2 0.019 4.1E-07 46.3 13.2 114 31-147 5-129 (321)
375 TIGR02355 moeB molybdopterin s 97.1 0.011 2.3E-07 45.8 11.0 105 30-152 22-152 (240)
376 cd01065 NAD_bind_Shikimate_DH 97.1 0.0018 4E-08 46.1 6.4 75 31-108 18-92 (155)
377 PRK06598 aspartate-semialdehyd 97.1 0.0028 6E-08 51.9 7.7 70 32-106 1-74 (369)
378 TIGR01470 cysG_Nterm siroheme 97.1 0.0047 1E-07 46.6 8.4 71 30-105 7-77 (205)
379 PRK08762 molybdopterin biosynt 97.1 0.0074 1.6E-07 49.7 10.1 104 30-151 133-262 (376)
380 cd00755 YgdL_like Family of ac 97.0 0.017 3.7E-07 44.4 11.2 102 31-150 10-138 (231)
381 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.0016 3.4E-08 49.0 5.4 70 29-106 25-94 (200)
382 PRK05690 molybdopterin biosynt 97.0 0.015 3.3E-07 45.0 11.0 102 30-149 30-157 (245)
383 PRK08328 hypothetical protein; 97.0 0.0065 1.4E-07 46.7 8.7 105 30-152 25-156 (231)
384 COG3268 Uncharacterized conser 97.0 0.00099 2.1E-08 53.2 4.1 74 33-109 7-83 (382)
385 cd01489 Uba2_SUMO Ubiquitin ac 97.0 0.017 3.7E-07 46.3 11.0 101 34-152 1-128 (312)
386 TIGR01745 asd_gamma aspartate- 97.0 0.013 2.7E-07 48.0 10.4 96 33-152 1-101 (366)
387 PRK01710 murD UDP-N-acetylmura 97.0 0.011 2.3E-07 50.0 10.5 76 30-108 12-88 (458)
388 PRK08644 thiamine biosynthesis 96.9 0.022 4.8E-07 43.1 11.0 106 30-153 26-157 (212)
389 PRK05597 molybdopterin biosynt 96.9 0.014 3E-07 47.8 10.3 105 30-152 26-156 (355)
390 PRK12549 shikimate 5-dehydroge 96.9 0.0041 8.9E-08 49.3 6.9 74 31-105 126-200 (284)
391 TIGR01809 Shik-DH-AROM shikima 96.9 0.0036 7.8E-08 49.5 6.5 77 31-108 124-201 (282)
392 COG2085 Predicted dinucleotide 96.8 0.0034 7.3E-08 47.1 5.7 39 32-72 1-39 (211)
393 PRK14192 bifunctional 5,10-met 96.8 0.0039 8.5E-08 49.3 6.3 36 29-65 156-191 (283)
394 PRK06719 precorrin-2 dehydroge 96.8 0.01 2.2E-07 42.8 7.8 68 30-105 11-78 (157)
395 PRK07878 molybdopterin biosynt 96.8 0.02 4.4E-07 47.4 10.5 104 31-152 41-170 (392)
396 TIGR01851 argC_other N-acetyl- 96.8 0.006 1.3E-07 48.7 7.1 81 34-149 3-83 (310)
397 cd05295 MDH_like Malate dehydr 96.8 0.024 5.2E-07 47.7 10.8 111 33-147 124-250 (452)
398 TIGR01915 npdG NADPH-dependent 96.7 0.0036 7.8E-08 47.6 5.5 37 33-70 1-37 (219)
399 PRK04148 hypothetical protein; 96.7 0.018 4E-07 40.3 8.4 88 31-143 16-106 (134)
400 TIGR02853 spore_dpaA dipicolin 96.7 0.0026 5.6E-08 50.5 4.6 69 30-105 149-217 (287)
401 PLN02819 lysine-ketoglutarate 96.7 0.013 2.7E-07 54.1 9.5 72 31-106 568-657 (1042)
402 cd01484 E1-2_like Ubiquitin ac 96.7 0.03 6.5E-07 43.1 10.2 101 34-152 1-129 (234)
403 PRK06129 3-hydroxyacyl-CoA deh 96.7 0.012 2.6E-07 47.1 8.3 34 33-68 3-36 (308)
404 PRK15116 sulfur acceptor prote 96.7 0.057 1.2E-06 42.4 11.7 36 30-66 28-63 (268)
405 PRK13940 glutamyl-tRNA reducta 96.6 0.0042 9.1E-08 51.8 5.4 77 30-110 179-255 (414)
406 TIGR01771 L-LDH-NAD L-lactate 96.6 0.041 8.8E-07 44.0 10.8 106 37-147 1-114 (299)
407 PRK05600 thiamine biosynthesis 96.6 0.029 6.3E-07 46.2 10.2 105 30-152 39-169 (370)
408 KOG0023 Alcohol dehydrogenase, 96.6 0.007 1.5E-07 48.3 6.1 99 31-147 181-280 (360)
409 COG0569 TrkA K+ transport syst 96.6 0.0049 1.1E-07 47.1 5.1 69 33-106 1-75 (225)
410 PRK00141 murD UDP-N-acetylmura 96.5 0.024 5.3E-07 48.1 9.7 72 31-108 14-85 (473)
411 KOG1494 NAD-dependent malate d 96.5 0.017 3.8E-07 45.2 7.9 115 31-147 27-146 (345)
412 cd01080 NAD_bind_m-THF_DH_Cycl 96.5 0.0076 1.6E-07 44.0 5.7 36 30-66 42-77 (168)
413 PRK08223 hypothetical protein; 96.5 0.068 1.5E-06 42.3 11.3 104 30-149 25-154 (287)
414 COG0169 AroE Shikimate 5-dehyd 96.5 0.0081 1.8E-07 47.5 6.1 108 31-141 125-244 (283)
415 COG0771 MurD UDP-N-acetylmuram 96.5 0.032 7E-07 46.9 9.9 75 32-109 7-81 (448)
416 cd01339 LDH-like_MDH L-lactate 96.5 0.049 1.1E-06 43.4 10.7 107 35-147 1-116 (300)
417 PRK07411 hypothetical protein; 96.5 0.04 8.6E-07 45.7 10.3 105 30-152 36-166 (390)
418 cd01487 E1_ThiF_like E1_ThiF_l 96.5 0.078 1.7E-06 38.9 10.8 33 34-67 1-33 (174)
419 COG0136 Asd Aspartate-semialde 96.5 0.017 3.7E-07 46.4 7.7 97 32-153 1-102 (334)
420 PRK04207 glyceraldehyde-3-phos 96.4 0.034 7.3E-07 45.3 9.5 33 32-65 1-33 (341)
421 KOG1198 Zinc-binding oxidoredu 96.4 0.0057 1.2E-07 49.8 4.9 75 30-107 156-235 (347)
422 PRK08306 dipicolinate synthase 96.4 0.0059 1.3E-07 48.7 5.0 69 30-105 150-218 (296)
423 PRK09496 trkA potassium transp 96.4 0.021 4.4E-07 48.0 8.3 67 33-105 1-73 (453)
424 cd05213 NAD_bind_Glutamyl_tRNA 96.4 0.0064 1.4E-07 48.8 4.9 73 30-107 176-248 (311)
425 TIGR01408 Ube1 ubiquitin-activ 96.3 0.02 4.4E-07 52.8 8.4 104 31-152 23-150 (1008)
426 PLN02520 bifunctional 3-dehydr 96.3 0.012 2.6E-07 50.7 6.4 74 30-109 377-451 (529)
427 PF13241 NAD_binding_7: Putati 96.3 0.13 2.9E-06 34.1 10.2 64 30-105 5-68 (103)
428 COG0604 Qor NADPH:quinone redu 96.2 0.0051 1.1E-07 49.7 3.7 74 31-106 142-220 (326)
429 PRK08655 prephenate dehydrogen 96.1 0.0098 2.1E-07 50.0 5.0 66 33-105 1-66 (437)
430 PRK14175 bifunctional 5,10-met 96.1 0.018 3.9E-07 45.6 6.1 37 29-66 155-191 (286)
431 PRK04308 murD UDP-N-acetylmura 96.1 0.096 2.1E-06 44.1 10.9 74 31-108 4-78 (445)
432 PRK03369 murD UDP-N-acetylmura 96.1 0.044 9.6E-07 46.8 9.0 73 30-109 10-82 (488)
433 PRK04690 murD UDP-N-acetylmura 96.1 0.09 1.9E-06 44.7 10.6 75 31-109 7-81 (468)
434 PF02826 2-Hacid_dh_C: D-isome 96.0 0.0043 9.3E-08 45.6 2.2 38 30-69 34-71 (178)
435 PRK06901 aspartate-semialdehyd 96.0 0.037 8.1E-07 44.4 7.6 104 33-161 4-110 (322)
436 TIGR01035 hemA glutamyl-tRNA r 96.0 0.012 2.6E-07 49.2 4.9 75 30-109 178-252 (417)
437 cd05191 NAD_bind_amino_acid_DH 96.0 0.051 1.1E-06 34.9 6.9 35 30-65 21-55 (86)
438 PLN00203 glutamyl-tRNA reducta 96.0 0.016 3.5E-07 49.7 5.6 79 30-110 264-342 (519)
439 PRK14027 quinate/shikimate deh 96.0 0.015 3.3E-07 46.0 5.1 77 31-108 126-205 (283)
440 PRK12749 quinate/shikimate deh 95.9 0.039 8.4E-07 43.9 7.3 38 30-68 122-159 (288)
441 TIGR00036 dapB dihydrodipicoli 95.9 0.12 2.7E-06 40.5 10.0 32 33-64 2-33 (266)
442 PRK13303 L-aspartate dehydroge 95.9 0.076 1.6E-06 41.6 8.6 71 32-107 1-71 (265)
443 PRK05562 precorrin-2 dehydroge 95.8 0.082 1.8E-06 40.4 8.4 70 31-105 24-93 (223)
444 PF03807 F420_oxidored: NADP o 95.8 0.017 3.7E-07 37.6 4.2 65 34-105 1-69 (96)
445 COG1648 CysG Siroheme synthase 95.8 0.1 2.2E-06 39.5 8.9 70 30-104 10-79 (210)
446 PRK00045 hemA glutamyl-tRNA re 95.8 0.018 3.8E-07 48.3 5.1 75 30-109 180-254 (423)
447 cd01490 Ube1_repeat2 Ubiquitin 95.8 0.19 4.2E-06 42.2 11.1 101 34-152 1-136 (435)
448 cd01493 APPBP1_RUB Ubiquitin a 95.8 0.16 3.4E-06 42.7 10.5 106 30-153 18-151 (425)
449 PF02882 THF_DHG_CYH_C: Tetrah 95.8 0.049 1.1E-06 39.4 6.6 39 28-67 32-70 (160)
450 PRK00421 murC UDP-N-acetylmura 95.7 0.11 2.3E-06 44.1 9.6 72 31-109 6-78 (461)
451 PF00070 Pyr_redox: Pyridine n 95.7 0.038 8.3E-07 34.8 5.4 35 34-70 1-35 (80)
452 PF00670 AdoHcyase_NAD: S-aden 95.7 0.0076 1.6E-07 43.5 2.3 72 27-108 18-89 (162)
453 PF03446 NAD_binding_2: NAD bi 95.7 0.032 7E-07 40.3 5.4 65 32-105 1-65 (163)
454 PRK14194 bifunctional 5,10-met 95.6 0.04 8.8E-07 43.9 6.2 39 29-68 156-194 (301)
455 PRK05476 S-adenosyl-L-homocyst 95.6 0.026 5.7E-07 47.1 5.3 67 30-106 210-276 (425)
456 PRK13982 bifunctional SbtC-lik 95.5 0.06 1.3E-06 45.6 7.2 71 30-109 254-346 (475)
457 COG1004 Ugd Predicted UDP-gluc 95.5 0.13 2.8E-06 42.4 8.7 33 33-67 1-33 (414)
458 PRK10792 bifunctional 5,10-met 95.4 0.062 1.3E-06 42.5 6.5 37 29-66 156-192 (285)
459 PRK08291 ectoine utilization p 95.4 0.051 1.1E-06 44.0 6.2 76 32-108 132-208 (330)
460 cd08259 Zn_ADH5 Alcohol dehydr 95.4 0.099 2.1E-06 41.6 7.8 37 30-67 161-197 (332)
461 KOG3019 Predicted nucleoside-d 95.3 0.012 2.6E-07 44.9 2.3 121 31-163 11-146 (315)
462 PRK09310 aroDE bifunctional 3- 95.3 0.058 1.2E-06 46.0 6.6 70 30-107 330-400 (477)
463 cd05212 NAD_bind_m-THF_DH_Cycl 95.3 0.094 2E-06 37.1 6.6 37 29-66 25-61 (140)
464 PRK07417 arogenate dehydrogena 95.3 0.07 1.5E-06 42.1 6.5 65 33-105 1-65 (279)
465 cd08293 PTGR2 Prostaglandin re 95.3 0.023 4.9E-07 45.8 3.9 34 33-67 156-190 (345)
466 cd00401 AdoHcyase S-adenosyl-L 95.2 0.059 1.3E-06 45.0 6.3 68 29-106 199-266 (413)
467 PF02254 TrkA_N: TrkA-N domain 95.2 0.18 3.9E-06 33.9 7.8 64 35-105 1-70 (116)
468 PRK13304 L-aspartate dehydroge 95.2 0.092 2E-06 41.2 7.1 67 33-106 2-70 (265)
469 PRK14176 bifunctional 5,10-met 95.2 0.078 1.7E-06 42.0 6.5 36 29-65 161-196 (287)
470 PRK08818 prephenate dehydrogen 95.2 0.067 1.5E-06 44.0 6.4 36 31-66 3-38 (370)
471 TIGR02992 ectoine_eutC ectoine 95.2 0.06 1.3E-06 43.5 6.1 75 32-107 129-204 (326)
472 PRK08618 ornithine cyclodeamin 95.2 0.051 1.1E-06 43.9 5.6 76 32-108 127-203 (325)
473 COG1179 Dinucleotide-utilizing 95.2 0.25 5.3E-06 38.1 8.8 35 31-66 29-63 (263)
474 PRK08300 acetaldehyde dehydrog 95.1 0.12 2.7E-06 41.2 7.5 97 31-149 3-104 (302)
475 PRK15469 ghrA bifunctional gly 95.1 0.085 1.8E-06 42.4 6.7 65 30-106 134-199 (312)
476 PF03721 UDPG_MGDP_dh_N: UDP-g 95.1 0.039 8.5E-07 40.9 4.4 33 33-67 1-33 (185)
477 COG0373 HemA Glutamyl-tRNA red 95.1 0.077 1.7E-06 44.1 6.4 75 30-109 176-250 (414)
478 PLN02494 adenosylhomocysteinas 95.1 0.069 1.5E-06 45.2 6.2 40 28-69 250-289 (477)
479 PRK12550 shikimate 5-dehydroge 95.1 0.065 1.4E-06 42.2 5.8 66 32-106 122-187 (272)
480 cd01488 Uba3_RUB Ubiquitin act 95.1 0.34 7.4E-06 38.5 9.8 32 34-66 1-32 (291)
481 PRK13535 erythrose 4-phosphate 95.1 0.42 9.1E-06 38.8 10.5 98 33-149 2-125 (336)
482 PRK07819 3-hydroxybutyryl-CoA 95.0 0.18 3.9E-06 40.0 8.3 37 33-71 6-42 (286)
483 PRK14188 bifunctional 5,10-met 95.0 0.09 2E-06 41.9 6.4 35 29-64 155-189 (296)
484 PRK14851 hypothetical protein; 95.0 0.49 1.1E-05 42.1 11.5 102 30-147 41-168 (679)
485 PRK13302 putative L-aspartate 95.0 0.2 4.3E-06 39.5 8.3 110 31-146 5-123 (271)
486 PRK09496 trkA potassium transp 95.0 0.12 2.5E-06 43.5 7.4 69 31-105 230-305 (453)
487 PRK14852 hypothetical protein; 95.0 0.45 9.7E-06 43.8 11.3 107 30-152 330-462 (989)
488 PRK03803 murD UDP-N-acetylmura 94.9 0.4 8.8E-06 40.4 10.6 75 30-108 4-79 (448)
489 PRK13243 glyoxylate reductase; 94.9 0.048 1E-06 44.3 4.8 66 30-106 148-213 (333)
490 KOG1196 Predicted NAD-dependen 94.9 0.27 5.8E-06 39.1 8.7 108 31-158 153-265 (343)
491 KOG4022 Dihydropteridine reduc 94.9 0.12 2.7E-06 37.4 6.3 33 32-65 3-35 (236)
492 PRK11199 tyrA bifunctional cho 94.9 0.05 1.1E-06 44.9 4.9 35 31-66 97-131 (374)
493 PRK14189 bifunctional 5,10-met 94.9 0.097 2.1E-06 41.4 6.3 36 29-65 155-190 (285)
494 cd08295 double_bond_reductase_ 94.9 0.041 8.8E-07 44.3 4.3 37 30-67 150-186 (338)
495 TIGR00518 alaDH alanine dehydr 94.8 0.033 7.1E-07 45.9 3.7 73 31-107 166-240 (370)
496 PRK02705 murD UDP-N-acetylmura 94.8 0.33 7.2E-06 40.9 9.9 72 34-108 2-79 (459)
497 PTZ00075 Adenosylhomocysteinas 94.8 0.06 1.3E-06 45.5 5.1 38 29-68 251-288 (476)
498 COG2130 Putative NADP-dependen 94.8 0.13 2.9E-06 40.8 6.7 104 31-154 150-257 (340)
499 COG0287 TyrA Prephenate dehydr 94.8 0.12 2.6E-06 40.8 6.6 36 32-69 3-38 (279)
500 TIGR01087 murD UDP-N-acetylmur 94.8 0.38 8.2E-06 40.3 10.0 72 34-108 1-73 (433)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=6.3e-27 Score=179.99 Aligned_cols=144 Identities=37% Similarity=0.590 Sum_probs=127.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~~a 105 (190)
|+||||||+||||++.+..|++. |++|.+++.-.......+... ...++++|+.|.+. .++|.|||+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~-G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT-GHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC-CCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 67999999999999999999998 999999988777666555432 26899999999754 3699999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHH
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKL 184 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~ 184 (190)
|...+..+-+.|.++|+.|+.+|.+|+++|++.++ ++||-||+.+||.+...|++|+ .|..+.++| |.||+
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-----~~~~p~NPY---G~sKl 147 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-----SPLAPINPY---GRSKL 147 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-----CCCCCCCcc---hhHHH
Confidence 98888888899999999999999999999999998 8999999999999999999999 677788999 88899
Q ss_pred hhhhc
Q 029640 185 IGELG 189 (190)
Q Consensus 185 ~~E~~ 189 (190)
..|+.
T Consensus 148 m~E~i 152 (329)
T COG1087 148 MSEEI 152 (329)
T ss_pred HHHHH
Confidence 99973
No 2
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.93 E-value=5.3e-25 Score=182.73 Aligned_cols=154 Identities=74% Similarity=1.184 Sum_probs=124.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP 110 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~ 110 (190)
..|+|+||||+||||++|++.|+++ |++|++++|...........+.....++++..|+.+....++|+|||+|+...+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~ 197 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASP 197 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECceeccc
Confidence 3489999999999999999999999 899999987643322222222223468889999998888899999999987665
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHhhhh
Q 029640 111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
..+..++.+.+++|+.++.+++++|++.+.++||+||.++||.....+.+|+.|...+|..+.+.| +.+|+.+|+
T Consensus 198 ~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Y---g~SK~~aE~ 272 (436)
T PLN02166 198 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY---DEGKRTAET 272 (436)
T ss_pred hhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCch---HHHHHHHHH
Confidence 444556788899999999999999999888999999999999776667888866555666666778 888999986
No 3
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.93 E-value=6.4e-25 Score=182.50 Aligned_cols=154 Identities=71% Similarity=1.150 Sum_probs=124.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP 110 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~ 110 (190)
++|+|+||||+||||++|++.|+++ |++|++++|................+++++..|+.+..+.++|+|||+|+...+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~ 196 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASP 196 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeeecch
Confidence 4589999999999999999999999 899999877533322222222234578889999999888899999999987665
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHhhhh
Q 029640 111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.....++.+.+++|+.++.+++++|++.++|+||+||..+|+.....+.+|+.|...+|..+.+.| +.+|..+|+
T Consensus 197 ~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y---~~SK~~aE~ 271 (442)
T PLN02206 197 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY---DEGKRTAET 271 (442)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchH---HHHHHHHHH
Confidence 444557788999999999999999999988999999999999776667888866555565555677 888999986
No 4
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.92 E-value=6.9e-24 Score=171.80 Aligned_cols=150 Identities=32% Similarity=0.374 Sum_probs=117.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh------cCCceEEEeccccccc-----cCCc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPL-----LIEV 98 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~-----~~~~ 98 (190)
+.+|+|+||||+||||++|++.|+++ +++|++++|........+.... ...++.++.+|+.|.. +.++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL-NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 46799999999999999999999999 7999999886543322222111 1135788999999864 3579
Q ss_pred CEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchh
Q 029640 99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVL 177 (190)
Q Consensus 99 d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~ 177 (190)
|+|||+|+......+..++...+++|+.++.+++++|++.++ ++||+||..+||.....+..|+ .+..+.+.|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y- 165 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RIGRPLSPY- 165 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CCCCCCChh-
Confidence 999999997655445566778899999999999999999987 8999999999997555566666 344455677
Q ss_pred hhhHHHHhhhh
Q 029640 178 KDGIMKLIGEL 188 (190)
Q Consensus 178 ~~~~sK~~~E~ 188 (190)
+.||..+|+
T Consensus 166 --~~sK~~~e~ 174 (348)
T PRK15181 166 --AVTKYVNEL 174 (348)
T ss_pred --hHHHHHHHH
Confidence 888999986
No 5
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.91 E-value=1e-23 Score=165.69 Aligned_cols=155 Identities=25% Similarity=0.316 Sum_probs=121.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh--hhhhhhc-CCceEEEeccccccc-----cCCcCEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--NLRKWIG-HPRFELIRHDVTEPL-----LIEVDQIY 102 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~D~~~~~-----~~~~d~vi 102 (190)
.+++|+||||+||||+|+++.|+++ |+.|.++.|++++... ++.++.. ..+...+..|+.|+. ..+||+||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 5689999999999999999999999 9999999998877443 3544432 346899999999874 46899999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEecceecCCC-----CCCCCCCCCccCCCCCCcccc
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDP-----LVHPQDESYWGNVNPIGMFSF 175 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~~~~-----~~~~~~e~~~~~~~~~~~~~~ 175 (190)
|.|.+....... ...+.++..+.|+.|++++|++.+ + |+|++||+.+...+ ....++|+.|.+.+-.....
T Consensus 84 H~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~- 161 (327)
T KOG1502|consen 84 HTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK- 161 (327)
T ss_pred EeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH-
Confidence 999877654322 344789999999999999999998 5 99999998854422 34578999886655443322
Q ss_pred hhhhhHHHHhhhhc
Q 029640 176 VLKDGIMKLIGELG 189 (190)
Q Consensus 176 y~~~~~sK~~~E~~ 189 (190)
.+|..||.++|+.
T Consensus 162 -~~Y~~sK~lAEka 174 (327)
T KOG1502|consen 162 -LWYALSKTLAEKA 174 (327)
T ss_pred -HHHHHHHHHHHHH
Confidence 3348889999974
No 6
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.90 E-value=2.3e-23 Score=165.51 Aligned_cols=130 Identities=25% Similarity=0.213 Sum_probs=107.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~~a 105 (190)
|+||||||+||||+++++.|+++ | +|++++|... .+.+|+.|.+. .++|+|||+|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~-g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A 62 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL-G-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAA 62 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc-C-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 57999999999999999999998 5 6888877421 23468877532 2589999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHh
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLI 185 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~ 185 (190)
+...+..++.+++..+.+|+.++.+++++|++.+.++||+||.++|+.....+++|+ ++..|.+.| +.+|+.
T Consensus 63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~~~P~~~Y---g~sK~~ 134 (299)
T PRK09987 63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DATAPLNVY---GETKLA 134 (299)
T ss_pred ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CCCCCCCHH---HHHHHH
Confidence 988776667778888999999999999999999999999999999987666678888 456666778 888999
Q ss_pred hhh
Q 029640 186 GEL 188 (190)
Q Consensus 186 ~E~ 188 (190)
+|+
T Consensus 135 ~E~ 137 (299)
T PRK09987 135 GEK 137 (299)
T ss_pred HHH
Confidence 997
No 7
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.90 E-value=3.6e-23 Score=157.75 Aligned_cols=155 Identities=77% Similarity=1.202 Sum_probs=142.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
..+++|+||||+||||++|++.|+.+ |++|++++....+....+..+.....++.+..|+..+.+..+|.|+|+|++..
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~e-gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapas 103 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTE-GHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPAS 103 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhc-CCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCC
Confidence 36699999999999999999999999 79999999988877777777888889999999999999999999999999998
Q ss_pred CcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHhhhh
Q 029640 110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
+.....++-+++..|..++.+.+..|++.+.|+++.||+.|||.+..++..|++|....|..+...| +.-|..+|-
T Consensus 104 p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cy---degKr~aE~ 179 (350)
T KOG1429|consen 104 PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCY---DEGKRVAET 179 (350)
T ss_pred CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhh---hHHHHHHHH
Confidence 8877888999999999999999999999999999999999999999999999999999999988888 555988873
No 8
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.89 E-value=3.1e-22 Score=161.98 Aligned_cols=150 Identities=26% Similarity=0.350 Sum_probs=113.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccc-ccc-----cCCcCEEEEcc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-EPL-----LIEVDQIYHLA 105 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~-----~~~~d~vi~~a 105 (190)
||+|+||||+||||++|++.|++.++++|+++.|+... ...+.....+.++.+|+. +.. ..++|+|||+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a 76 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR----LGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV 76 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence 47899999999999999999998746899999875422 222222346899999997 432 24799999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccC-CCCC-CcccchhhhhHHH
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPI-GMFSFVLKDGIMK 183 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~-~~~~-~~~~~y~~~~~sK 183 (190)
+...+.....++...+++|+.++.+++++|++.+.++||+||..+||.....+++|+..+. ..+. .+.+.| +.+|
T Consensus 77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y---~~sK 153 (347)
T PRK11908 77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIY---ACSK 153 (347)
T ss_pred ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchH---HHHH
Confidence 8766544556788889999999999999999887899999999999975555667664211 1121 234567 8889
Q ss_pred Hhhhh
Q 029640 184 LIGEL 188 (190)
Q Consensus 184 ~~~E~ 188 (190)
..+|+
T Consensus 154 ~~~e~ 158 (347)
T PRK11908 154 QLMDR 158 (347)
T ss_pred HHHHH
Confidence 99885
No 9
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.89 E-value=2.8e-22 Score=162.00 Aligned_cols=147 Identities=27% Similarity=0.272 Sum_probs=112.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhhc------CCceEEEecccccccc-----C--Cc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG------HPRFELIRHDVTEPLL-----I--EV 98 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~~------~~~~~~~~~D~~~~~~-----~--~~ 98 (190)
|+|+||||+||||+++++.|++. |++|++++|+.... ...+..+.. ...+.++.+|+.|... . ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK-GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC-CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence 58999999999999999999999 89999998875421 111222110 2358899999998642 2 47
Q ss_pred CEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC----eEEEEecceecCCCCCCCCCCCCccCCCCCCccc
Q 029640 99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS 174 (190)
Q Consensus 99 d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~ 174 (190)
|+|||+|+......+...+...+++|+.++.+++++|++.++ ++||+||..+||.....+++|+ .+..+.+
T Consensus 80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~ 154 (343)
T TIGR01472 80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPFYPRS 154 (343)
T ss_pred CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCCCCCC
Confidence 999999997654434445667788999999999999998763 7999999999997655567777 4556667
Q ss_pred chhhhhHHHHhhhh
Q 029640 175 FVLKDGIMKLIGEL 188 (190)
Q Consensus 175 ~y~~~~~sK~~~E~ 188 (190)
.| +.||..+|.
T Consensus 155 ~Y---~~sK~~~e~ 165 (343)
T TIGR01472 155 PY---AAAKLYAHW 165 (343)
T ss_pred hh---HHHHHHHHH
Confidence 78 888999985
No 10
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.89 E-value=4.2e-22 Score=156.75 Aligned_cols=143 Identities=36% Similarity=0.449 Sum_probs=105.5
Q ss_pred EEEcccchHHHHHHHHHHhcCC--CeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCCC
Q 029640 36 LVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACPA 108 (190)
Q Consensus 36 lItG~~G~iG~~l~~~L~~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~~ 108 (190)
|||||+||||+++++.|+++ + ++|.++++....... ..........++++|++|.. +.++|+|||+|++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~-g~~~~Vr~~d~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~ 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLER-GYIYEVRVLDRSPPPKFL--KDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPV 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHC-CCceEEEEcccccccccc--hhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCccc
Confidence 69999999999999999999 6 788888876543321 11122233448999999863 56899999999876
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCC-CCCC---CCCCccCCCCCCcccchhhhhHHH
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQ---DESYWGNVNPIGMFSFVLKDGIMK 183 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~-~~~~---~e~~~~~~~~~~~~~~y~~~~~sK 183 (190)
... .....+..+++|+.||.+++++|++.++ |+||+||.++++.+. ..++ +|..+ .+......| +.||
T Consensus 78 ~~~-~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~---~~~~~~~~Y---~~SK 150 (280)
T PF01073_consen 78 PPW-GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP---YPSSPLDPY---AESK 150 (280)
T ss_pred ccc-CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc---ccccccCch---HHHH
Confidence 543 2456778999999999999999999998 899999999888622 2222 44422 222233456 8889
Q ss_pred Hhhhh
Q 029640 184 LIGEL 188 (190)
Q Consensus 184 ~~~E~ 188 (190)
+.+|+
T Consensus 151 ~~AE~ 155 (280)
T PF01073_consen 151 ALAEK 155 (280)
T ss_pred HHHHH
Confidence 99997
No 11
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.88 E-value=6.2e-22 Score=172.26 Aligned_cols=156 Identities=28% Similarity=0.422 Sum_probs=119.5
Q ss_pred hcccccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------cCCc
Q 029640 25 FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEV 98 (190)
Q Consensus 25 ~~~~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~ 98 (190)
++.++ .+|+|+||||+||||++|++.|+++++++|++++|...... ......+++++.+|++|.. +.++
T Consensus 309 ~~~~~-~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~----~~~~~~~~~~~~gDl~d~~~~l~~~l~~~ 383 (660)
T PRK08125 309 ACSAK-RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS----RFLGHPRFHFVEGDISIHSEWIEYHIKKC 383 (660)
T ss_pred hhhhh-cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh----hhcCCCceEEEeccccCcHHHHHHHhcCC
Confidence 44443 67899999999999999999999865799999998653321 1222346889999998742 3479
Q ss_pred CEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccC-CCCC-Ccccch
Q 029640 99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPI-GMFSFV 176 (190)
Q Consensus 99 d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~-~~~~-~~~~~y 176 (190)
|+|||+|+...+..+..++...+++|+.++.+++++|++.+.++||+||.++||.....+++|+.+.. ..+. .+.+.|
T Consensus 384 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Y 463 (660)
T PRK08125 384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIY 463 (660)
T ss_pred CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccch
Confidence 99999999776544556677889999999999999999988899999999999976555678875321 1222 234567
Q ss_pred hhhhHHHHhhhh
Q 029640 177 LKDGIMKLIGEL 188 (190)
Q Consensus 177 ~~~~~sK~~~E~ 188 (190)
+.||+.+|+
T Consensus 464 ---g~sK~~~E~ 472 (660)
T PRK08125 464 ---SVSKQLLDR 472 (660)
T ss_pred ---HHHHHHHHH
Confidence 888999986
No 12
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.88 E-value=8.5e-23 Score=161.29 Aligned_cols=127 Identities=33% Similarity=0.411 Sum_probs=98.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-------cCCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------~~~~d~vi~~a 105 (190)
|||+|+|++|+||+++.+.|.++ +++|+.+.|. ..|+.|.. ..++|+|||||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~-~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~a 59 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER-GYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCA 59 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT-SEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred CEEEEECCCCHHHHHHHHHHhhC-CCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence 78999999999999999999997 7899998774 34555542 23699999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHh
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLI 185 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~ 185 (190)
|...+..++.+++..+.+|+.++.+|+++|+..+.++||+||.+||+.....+++|+ ++..|.+.| |.+|+.
T Consensus 60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~-----d~~~P~~~Y---G~~K~~ 131 (286)
T PF04321_consen 60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTED-----DPPNPLNVY---GRSKLE 131 (286)
T ss_dssp ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TT-----S----SSHH---HHHHHH
T ss_pred eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccC-----CCCCCCCHH---HHHHHH
Confidence 998888899999999999999999999999999999999999999988777789998 566777888 888999
Q ss_pred hhh
Q 029640 186 GEL 188 (190)
Q Consensus 186 ~E~ 188 (190)
+|+
T Consensus 132 ~E~ 134 (286)
T PF04321_consen 132 GEQ 134 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 996
No 13
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.88 E-value=1.3e-21 Score=158.43 Aligned_cols=150 Identities=25% Similarity=0.282 Sum_probs=114.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIY 102 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi 102 (190)
+++|+|+||||+||||+++++.|+++ |++|++++|+..........+....++.++.+|+.+... .++|+||
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 80 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF 80 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence 46799999999999999999999999 899999988765443222222112357788899998642 2579999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEecceecCCCC-CCCCCCCCccCCCCCCcccchhhh
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGMFSFVLKD 179 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~~~~~-~~~~~e~~~~~~~~~~~~~~y~~~ 179 (190)
|+||......+..++...+++|+.++.+++++++..+ . ++|++||..+|+... ..+++|+ .+..+.+.|
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~~~p~~~Y--- 152 (349)
T TIGR02622 81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DPLGGHDPY--- 152 (349)
T ss_pred ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CCCCCCCcc---
Confidence 9999655444556778899999999999999998876 4 899999999998643 2346666 345555677
Q ss_pred hHHHHhhhh
Q 029640 180 GIMKLIGEL 188 (190)
Q Consensus 180 ~~sK~~~E~ 188 (190)
+.+|..+|.
T Consensus 153 ~~sK~~~e~ 161 (349)
T TIGR02622 153 SSSKACAEL 161 (349)
T ss_pred hhHHHHHHH
Confidence 888998875
No 14
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=4.9e-22 Score=153.94 Aligned_cols=126 Identities=29% Similarity=0.347 Sum_probs=111.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~~a 105 (190)
|+++|||++|.+|.+|.+.|. . +.+|+.+.|.. +|++|.+. .++|+|||+|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~-~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~~PDvVIn~A 58 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G-EFEVIATDRAE--------------------LDITDPDAVLEVIRETRPDVVINAA 58 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C-CceEEeccCcc--------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence 459999999999999999998 3 68898887732 56666542 3699999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHh
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLI 185 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~ 185 (190)
+.+.++.++..++..|.+|..++.+++++|++.+.++||+||.+||....+.+|.|+ ++..|.+.| |.||++
T Consensus 59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~-----D~~~P~nvY---G~sKl~ 130 (281)
T COG1091 59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKET-----DTPNPLNVY---GRSKLA 130 (281)
T ss_pred cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCC-----CCCCChhhh---hHHHHH
Confidence 999999999999999999999999999999999999999999999998888899999 677777888 999999
Q ss_pred hhh
Q 029640 186 GEL 188 (190)
Q Consensus 186 ~E~ 188 (190)
+|+
T Consensus 131 GE~ 133 (281)
T COG1091 131 GEE 133 (281)
T ss_pred HHH
Confidence 996
No 15
>PLN02427 UDP-apiose/xylose synthase
Probab=99.88 E-value=1.5e-21 Score=160.22 Aligned_cols=132 Identities=28% Similarity=0.395 Sum_probs=98.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhh--hcCCceEEEeccccccc-----cCCcCEEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPL-----LIEVDQIYH 103 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----~~~~d~vi~ 103 (190)
+.|+|+||||+||||++|++.|+++++++|++++|+........... ....+++++.+|+.|.. +.++|+|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 45889999999999999999999985589999987643322111100 00136899999999864 346999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCC
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDES 162 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~ 162 (190)
+|+...+.....++.+.+..|+.++.+++++|++.+.|+||+||.++||.....+++|+
T Consensus 93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~ 151 (386)
T PLN02427 93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD 151 (386)
T ss_pred cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcc
Confidence 99876543333455667789999999999999887779999999999997544344443
No 16
>PLN02240 UDP-glucose 4-epimerase
Probab=99.87 E-value=2.7e-21 Score=156.54 Aligned_cols=150 Identities=29% Similarity=0.427 Sum_probs=115.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh---hhhhhhc--CCceEEEecccccccc-------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIG--HPRFELIRHDVTEPLL-------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~~D~~~~~~-------~~ 97 (190)
+++++|+||||+|+||+++++.|+++ +++|++++|....... .+..... ..++.++.+|+.+... .+
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA-GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 46789999999999999999999999 7899998875432221 1221111 2367889999998642 26
Q ss_pred cCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccch
Q 029640 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFV 176 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y 176 (190)
+|+|||+|+..........+...+++|+.++.+++++|++.++ ++|++||+++|+.....+++|+ .+..+...|
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~~~~~Y 156 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPLSATNPY 156 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCCHH
Confidence 8999999986543333456778899999999999999998886 8999999999987666678887 455555667
Q ss_pred hhhhHHHHhhhh
Q 029640 177 LKDGIMKLIGEL 188 (190)
Q Consensus 177 ~~~~~sK~~~E~ 188 (190)
+.||+.+|+
T Consensus 157 ---~~sK~~~e~ 165 (352)
T PLN02240 157 ---GRTKLFIEE 165 (352)
T ss_pred ---HHHHHHHHH
Confidence 888999986
No 17
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.87 E-value=1.8e-21 Score=157.08 Aligned_cols=148 Identities=23% Similarity=0.272 Sum_probs=114.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhh-----cCCceEEEeccccccccC-------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWI-----GHPRFELIRHDVTEPLLI-------E 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~-----~~~~~~~~~~D~~~~~~~-------~ 97 (190)
++++|+||||+||||+++++.|+++ |++|+++.|+.... ...+..+. ...++.++.+|+.|.... +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK-GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 6789999999999999999999999 89999988764321 11222211 123588999999986421 4
Q ss_pred cCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC------eEEEEecceecCCCCCCCCCCCCccCCCCCC
Q 029640 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPIG 171 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~ 171 (190)
+|+|||+|+......+..++...+++|+.++.+++++|.+.++ ++|++||..+||.... +++|+ .+..
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-----~~~~ 157 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPFH 157 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-----CCCC
Confidence 7999999997654444456677889999999999999988763 7999999999997654 67777 4566
Q ss_pred cccchhhhhHHHHhhhh
Q 029640 172 MFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 172 ~~~~y~~~~~sK~~~E~ 188 (190)
+.+.| +.||..+|+
T Consensus 158 p~~~Y---~~sK~~~e~ 171 (340)
T PLN02653 158 PRSPY---AVAKVAAHW 171 (340)
T ss_pred CCChh---HHHHHHHHH
Confidence 66778 888999986
No 18
>PLN02214 cinnamoyl-CoA reductase
Probab=99.87 E-value=4.3e-21 Score=155.16 Aligned_cols=150 Identities=25% Similarity=0.382 Sum_probs=112.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh-hhhhhhc-CCceEEEeccccccc-----cCCcCEEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIG-HPRFELIRHDVTEPL-----LIEVDQIYH 103 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~-----~~~~d~vi~ 103 (190)
++++|+||||+||||+++++.|+++ |++|.++.|+...... .+..+.. ..++.++.+|+.+.. +.++|+|||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 6789999999999999999999999 8999999886543221 1222211 235788899999864 346999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecc-eecCCCCC---CCCCCCCccCCC-CCCcccchh
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS-EVYGDPLV---HPQDESYWGNVN-PIGMFSFVL 177 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~-~~~~~~~~---~~~~e~~~~~~~-~~~~~~~y~ 177 (190)
+|+... .++...+++|+.++.+++++|++.++ |+|++||. .+|+.... .+++|+.|.+.. +..+.+.|
T Consensus 88 ~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y- 161 (342)
T PLN02214 88 TASPVT-----DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY- 161 (342)
T ss_pred ecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH-
Confidence 998642 35678899999999999999999887 89999996 58875332 357888764332 33344567
Q ss_pred hhhHHHHhhhhc
Q 029640 178 KDGIMKLIGELG 189 (190)
Q Consensus 178 ~~~~sK~~~E~~ 189 (190)
+.||+.+|+.
T Consensus 162 --~~sK~~aE~~ 171 (342)
T PLN02214 162 --CYGKMVAEQA 171 (342)
T ss_pred --HHHHHHHHHH
Confidence 8889999863
No 19
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=2e-21 Score=149.28 Aligned_cols=148 Identities=32% Similarity=0.483 Sum_probs=121.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCC-CCChhhhhhhhcCCceEEEeccccccccC-------CcCEEEE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH 103 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-------~~d~vi~ 103 (190)
|++|||||.||||+.+++.++++.. .+|+++++-- ......+..+.+.+...++++|+.|.++. ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5799999999999999999999843 4466665421 12234455566678999999999997542 5999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEecceecCCCCCC--CCCCCCccCCCCCCcccchhhh
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGMFSFVLKD 179 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS~~~~~~~~~~--~~~e~~~~~~~~~~~~~~y~~~ 179 (190)
+|+-..++.+..+|..++++|+.||.+|++++++... |+++|||..|||.-... .++|. +|+.|.++|
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~-----tp~~PsSPY--- 152 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTET-----TPYNPSSPY--- 152 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccC-----CCCCCCCCc---
Confidence 9999888889999999999999999999999999884 99999999999975442 57787 799999999
Q ss_pred hHHHHhhhh
Q 029640 180 GIMKLIGEL 188 (190)
Q Consensus 180 ~~sK~~~E~ 188 (190)
.+||+.+++
T Consensus 153 SASKAasD~ 161 (340)
T COG1088 153 SASKAASDL 161 (340)
T ss_pred chhhhhHHH
Confidence 777988754
No 20
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.86 E-value=8.1e-21 Score=158.20 Aligned_cols=154 Identities=27% Similarity=0.351 Sum_probs=107.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh----------------hhhhhhh--cCCceEEEecccc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK----------------DNLRKWI--GHPRFELIRHDVT 91 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~----------------~~~~~~~--~~~~~~~~~~D~~ 91 (190)
.++|+|+||||+||||++|++.|+++ |++|++++|...... ..+..+. ...+++++.+|+.
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKR-GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 47899999999999999999999999 899999764321110 1111111 1236889999999
Q ss_pred cccc-------CCcCEEEEccCCCCCcccccC---chhHHHHHHHHHHHHHHHHHHcCC--eEEEEecceecCCCCCCCC
Q 029640 92 EPLL-------IEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQ 159 (190)
Q Consensus 92 ~~~~-------~~~d~vi~~ag~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS~~~~~~~~~~~~ 159 (190)
|... .++|+|||+|+......+..+ .+..+++|+.++.+++++|++.++ ++|++||..+||... .++
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~ 202 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDI 202 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCC
Confidence 8642 258999999976544333323 245678999999999999998874 799999999999643 233
Q ss_pred CCCCcc---------CCCCCCcccchhhhhHHHHhhhh
Q 029640 160 DESYWG---------NVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 160 ~e~~~~---------~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
+|...+ ...+..+.+.| +.||+.+|.
T Consensus 203 ~E~~i~~~~~~~e~~~~~~~~P~s~Y---g~SK~a~E~ 237 (442)
T PLN02572 203 EEGYITITHNGRTDTLPYPKQASSFY---HLSKVHDSH 237 (442)
T ss_pred cccccccccccccccccCCCCCCCcc---hhHHHHHHH
Confidence 433110 01244555678 888999885
No 21
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.86 E-value=8.1e-21 Score=154.08 Aligned_cols=154 Identities=25% Similarity=0.245 Sum_probs=109.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~a 105 (190)
.+|+|+||||+||||+++++.|+++ |++|+++.|+..........+.....+.++.+|+.+.. +.++|+|||+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 5689999999999999999999999 88999988865433332222222346888999999864 34699999999
Q ss_pred CCCCCcc--cccCchhH-----HHHHHHHHHHHHHHHHHcC-C-eEEEEecceecCCCC-----CCCCCCCCccCCC---
Q 029640 106 CPASPIF--YKYNPVKT-----IKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL-----VHPQDESYWGNVN--- 168 (190)
Q Consensus 106 g~~~~~~--~~~~~~~~-----~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~~~~~-----~~~~~e~~~~~~~--- 168 (190)
+...... ...+++.. ++.|+.++.+++++|++.+ + ++|++||.++|+... ..+++|+.+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 9765432 22334433 4555699999999998875 5 899999999998532 1356776432221
Q ss_pred -CCCcccchhhhhHHHHhhhh
Q 029640 169 -PIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 169 -~~~~~~~y~~~~~sK~~~E~ 188 (190)
+..+...| +.||+.+|+
T Consensus 168 ~~~~~~~~Y---~~sK~~~E~ 185 (353)
T PLN02896 168 NTKASGWVY---VLSKLLTEE 185 (353)
T ss_pred ccCCCCccH---HHHHHHHHH
Confidence 12233467 889999996
No 22
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.86 E-value=3.5e-21 Score=149.70 Aligned_cols=148 Identities=29% Similarity=0.402 Sum_probs=124.1
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhh---h-cCCceEEEeccccccccC-------CcCE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPLLI-------EVDQ 100 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~D~~~~~~~-------~~d~ 100 (190)
.++|+||||.||||++.+-.|+++ |+.|++++.-.......+... . ...++.+.++|++|..+. ++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~-gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR-GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC-CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 478999999999999999999999 899999876554443333322 1 136899999999997543 5999
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCC-cccchhh
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG-MFSFVLK 178 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~-~~~~y~~ 178 (190)
|+|+|+.-....+.+++..++..|+.++.++++.++++++ .+||.||+.+||.+...|++|+. +.. +.+.|
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~-----~t~~p~~py-- 153 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEED-----PTDQPTNPY-- 153 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcC-----CCCCCCCcc--
Confidence 9999998888888888999999999999999999999997 89999999999999999999994 443 66778
Q ss_pred hhHHHHhhhh
Q 029640 179 DGIMKLIGEL 188 (190)
Q Consensus 179 ~~~sK~~~E~ 188 (190)
|.+|...|.
T Consensus 154 -g~tK~~iE~ 162 (343)
T KOG1371|consen 154 -GKTKKAIEE 162 (343)
T ss_pred -hhhhHHHHH
Confidence 777998875
No 23
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.86 E-value=1.6e-20 Score=152.21 Aligned_cols=148 Identities=31% Similarity=0.381 Sum_probs=107.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCe-EEEEcCCCCCCh-hhhhhhhcCCceEEEecccccccc-----C--CcCEEE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIY 102 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~-v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~-----~--~~d~vi 102 (190)
|++|+||||+||||+++++.|+++ +++ +.+++|...... ..+..+....++.++.+|+.|... . ++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE-TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc-CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 478999999999999999999999 655 445554322111 111111122367888999998642 1 489999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc---------CC-eEEEEecceecCCCC--CCCCCCCCccCCCCC
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSEVYGDPL--VHPQDESYWGNVNPI 170 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~-~~i~vSS~~~~~~~~--~~~~~e~~~~~~~~~ 170 (190)
|+||......+...+..++++|+.++.+++++|.+. ++ ++|++||.++|+... ..+++|+ .+.
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~~ 154 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TPY 154 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CCC
Confidence 999976544344567789999999999999999762 34 899999999999542 3357776 455
Q ss_pred CcccchhhhhHHHHhhhh
Q 029640 171 GMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 171 ~~~~~y~~~~~sK~~~E~ 188 (190)
.+.+.| +.||+.+|.
T Consensus 155 ~p~s~Y---~~sK~~~e~ 169 (355)
T PRK10217 155 APSSPY---SASKASSDH 169 (355)
T ss_pred CCCChh---HHHHHHHHH
Confidence 556677 888999875
No 24
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.85 E-value=2.9e-20 Score=149.91 Aligned_cols=152 Identities=22% Similarity=0.252 Sum_probs=108.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh--hhhhhcCCceEEEecccccccc-----CCcCEEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKWIGHPRFELIRHDVTEPLL-----IEVDQIYH 103 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~-----~~~d~vi~ 103 (190)
.+++|+||||+||||+++++.|+++ |++|+++.|+....... +..+.....+.++.+|+.|... .++|+|||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 5689999999999999999999999 88998887764332211 1111111357889999998642 46999999
Q ss_pred ccCCCCCcccccCc-hhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecceecCCCC----CCCCCCCCccCC----CCCCc
Q 029640 104 LACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPL----VHPQDESYWGNV----NPIGM 172 (190)
Q Consensus 104 ~ag~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~~~~~~~~----~~~~~e~~~~~~----~~~~~ 172 (190)
+|+.... ...++ ...+++|+.++.++++++.+. ++ ++||+||..+|+... ..+++|+.|... .+..+
T Consensus 87 ~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 87 VATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred eCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 9985421 12233 346799999999999999876 45 999999999998532 345677654321 12334
Q ss_pred ccchhhhhHHHHhhhh
Q 029640 173 FSFVLKDGIMKLIGEL 188 (190)
Q Consensus 173 ~~~y~~~~~sK~~~E~ 188 (190)
.+.| +.||+.+|+
T Consensus 165 ~~~Y---~~sK~~~E~ 177 (338)
T PLN00198 165 TWGY---PASKTLAEK 177 (338)
T ss_pred cchh---HHHHHHHHH
Confidence 5567 888999986
No 25
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.85 E-value=2.5e-20 Score=150.06 Aligned_cols=147 Identities=30% Similarity=0.457 Sum_probs=110.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh--cCCceEEEecccccccc-------CCcCEEEE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-------IEVDQIYH 103 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~-------~~~d~vi~ 103 (190)
|+|+||||+||||+++++.|+++ |++|++++|...........+. ...++.++.+|+.|... .++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 57999999999999999999999 8899988764333222221111 12356778899988642 25899999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCC-CcccchhhhhH
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI-GMFSFVLKDGI 181 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~-~~~~~y~~~~~ 181 (190)
+|+..........+.+.+++|+.++.+++++|++.++ ++|++||+++|+.....+++|+. +. .+...| +.
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~-----~~~~p~~~Y---~~ 151 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESF-----PTGTPQSPY---GK 151 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCcccccc-----CCCCCCChh---HH
Confidence 9986543333345667899999999999999999887 89999999999976556778873 33 344566 88
Q ss_pred HHHhhhh
Q 029640 182 MKLIGEL 188 (190)
Q Consensus 182 sK~~~E~ 188 (190)
+|..+|+
T Consensus 152 sK~~~E~ 158 (338)
T PRK10675 152 SKLMVEQ 158 (338)
T ss_pred HHHHHHH
Confidence 8999885
No 26
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.85 E-value=1.6e-20 Score=143.62 Aligned_cols=141 Identities=36% Similarity=0.501 Sum_probs=113.3
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC-------CcCEEEEccCC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLACP 107 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-------~~d~vi~~ag~ 107 (190)
|+||||+||||+++++.|+++ ++.|+.+.|+.......... ..+.++.+|+.+.... ++|+|||+|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK-GHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHc-CCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999999 88888888865544332221 1789999999986432 57999999987
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHhh
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLIG 186 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~~ 186 (190)
.............++.|+.++.+++++|++.++ ++|++||+.+|+.....+++|+ .+..+.+.| +.+|...
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~~~~~~Y---~~~K~~~ 147 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPINPLSPY---GASKRAA 147 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGCCHSSHH---HHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccc---ccccccc
Confidence 542223356778899999999999999999998 9999999999998877788888 444555667 8889998
Q ss_pred hh
Q 029640 187 EL 188 (190)
Q Consensus 187 E~ 188 (190)
|+
T Consensus 148 e~ 149 (236)
T PF01370_consen 148 EE 149 (236)
T ss_dssp HH
T ss_pred cc
Confidence 85
No 27
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.84 E-value=3.5e-20 Score=150.11 Aligned_cols=148 Identities=31% Similarity=0.392 Sum_probs=105.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC-CChhhhhhhhcCCceEEEecccccccc-------CCcCEEEEc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHL 104 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~~ 104 (190)
|+|+||||+||||+++++.|++++...|+++++... .....+..+.....+.++.+|+.|.+. .++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 579999999999999999999993344655554321 111222222223457888999998642 258999999
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc---------CC-eEEEEecceecCCCCC----------CCCCCCCc
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSEVYGDPLV----------HPQDESYW 164 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~-~~i~vSS~~~~~~~~~----------~~~~e~~~ 164 (190)
||..........++.++++|+.++.+++++|++. ++ ++|++||.++|+.... .+++|+
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~-- 158 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET-- 158 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc--
Confidence 9876543334567789999999999999999874 34 8999999999985311 134555
Q ss_pred cCCCCCCcccchhhhhHHHHhhhh
Q 029640 165 GNVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 165 ~~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.+..+.+.| +.||+.+|+
T Consensus 159 ---~~~~p~~~Y---~~sK~~~E~ 176 (352)
T PRK10084 159 ---TAYAPSSPY---SASKASSDH 176 (352)
T ss_pred ---CCCCCCChh---HHHHHHHHH
Confidence 455666677 888999885
No 28
>PLN02778 3,5-epimerase/4-reductase
Probab=99.84 E-value=8.4e-20 Score=145.05 Aligned_cols=134 Identities=19% Similarity=0.238 Sum_probs=97.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP 110 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~ 110 (190)
..|+|+||||+||||++|++.|+++ |++|+...++... ... +..|+. ..++|+|||+||....
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~-g~~V~~~~~~~~~-~~~------------v~~~l~---~~~~D~ViH~Aa~~~~ 70 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQ-GIDFHYGSGRLEN-RAS------------LEADID---AVKPTHVFNAAGVTGR 70 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC-CCEEEEecCccCC-HHH------------HHHHHH---hcCCCEEEECCcccCC
Confidence 3478999999999999999999999 7888754322111 111 112222 1368999999997653
Q ss_pred c---ccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCC------CCCCCCCCccCCCCCCcccchhhhhH
Q 029640 111 I---FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL------VHPQDESYWGNVNPIGMFSFVLKDGI 181 (190)
Q Consensus 111 ~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~------~~~~~e~~~~~~~~~~~~~~y~~~~~ 181 (190)
. +++.++.+.+++|+.++.+++++|++.+++++++||.++|+... ..+++|++ .+..+.+.| +.
T Consensus 71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Y---g~ 143 (298)
T PLN02778 71 PNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFY---SK 143 (298)
T ss_pred CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCch---HH
Confidence 2 34567888999999999999999999998888899989887532 22466664 233334678 88
Q ss_pred HHHhhhh
Q 029640 182 MKLIGEL 188 (190)
Q Consensus 182 sK~~~E~ 188 (190)
+|+.+|+
T Consensus 144 sK~~~E~ 150 (298)
T PLN02778 144 TKAMVEE 150 (298)
T ss_pred HHHHHHH
Confidence 8999996
No 29
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.84 E-value=1.2e-19 Score=145.49 Aligned_cols=153 Identities=22% Similarity=0.299 Sum_probs=109.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---c-CCceEEEeccccccc-----cCCcCEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---G-HPRFELIRHDVTEPL-----LIEVDQI 101 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~-----~~~~d~v 101 (190)
.+|+++||||+||||+++++.|+++ |++|+++.|+....... ..+. . ..+++++.+|+++.. +.++|+|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 81 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKT-DHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV 81 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhH-HHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence 4689999999999999999999999 88998887765443221 1111 1 246889999999875 2469999
Q ss_pred EEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecceecCCC-----CCCCCCCCCccCCCC-CCcc
Q 029640 102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDP-----LVHPQDESYWGNVNP-IGMF 173 (190)
Q Consensus 102 i~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~~~~~~~-----~~~~~~e~~~~~~~~-~~~~ 173 (190)
||+||........+.+.+.+++|+.++.+++++|.+. +. ++|++||..+|+.+ ...+++|+.+..... ..+.
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 161 (325)
T PLN02989 82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK 161 (325)
T ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence 9999965433333455678999999999999999875 34 89999998876542 233577775322111 1123
Q ss_pred cchhhhhHHHHhhhh
Q 029640 174 SFVLKDGIMKLIGEL 188 (190)
Q Consensus 174 ~~y~~~~~sK~~~E~ 188 (190)
+.| +.||+.+|+
T Consensus 162 ~~Y---~~sK~~~E~ 173 (325)
T PLN02989 162 QWY---VLSKTLAED 173 (325)
T ss_pred cch---HHHHHHHHH
Confidence 456 888999985
No 30
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.83 E-value=1.9e-19 Score=144.29 Aligned_cols=152 Identities=23% Similarity=0.345 Sum_probs=108.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh----cCCceEEEeccccccc-----cCCcCEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPL-----LIEVDQI 101 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~-----~~~~d~v 101 (190)
++++|+||||+||||+++++.|+++ |++|+++.|+...... ...+. ...++.++.+|+.+.. +.++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v 81 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKK-TEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV 81 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHH-HHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence 5789999999999999999999999 8899988886554321 11111 1246889999999875 3469999
Q ss_pred EEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecceec--CCC---CCCCCCCCCccCCC-CCCcc
Q 029640 102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY--GDP---LVHPQDESYWGNVN-PIGMF 173 (190)
Q Consensus 102 i~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~~~~--~~~---~~~~~~e~~~~~~~-~~~~~ 173 (190)
||+|+..... ..+.....+++|+.++.+++++|++. ++ |+|++||.++| +.. ...+++|+.|.... +..+.
T Consensus 82 ih~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 160 (322)
T PLN02986 82 FHTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK 160 (322)
T ss_pred EEeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence 9999865322 12223457899999999999999886 55 89999998754 432 23457787653221 11233
Q ss_pred cchhhhhHHHHhhhh
Q 029640 174 SFVLKDGIMKLIGEL 188 (190)
Q Consensus 174 ~~y~~~~~sK~~~E~ 188 (190)
+.| +.||..+|+
T Consensus 161 ~~Y---~~sK~~aE~ 172 (322)
T PLN02986 161 NWY---PLSKILAEN 172 (322)
T ss_pred cch---HHHHHHHHH
Confidence 567 888999985
No 31
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.83 E-value=1.4e-19 Score=157.93 Aligned_cols=150 Identities=29% Similarity=0.379 Sum_probs=111.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcC-CCeEEEEcCCCCCCh-hhhhhhhcCCceEEEecccccccc-------CCcCEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLL-------IEVDQI 101 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~-~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~v 101 (190)
++|+|+||||+||||+++++.|++++ +++|++++|...... ..+.......++.++.+|+.|... .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 56899999999999999999999973 578888877421111 111111123478899999998532 469999
Q ss_pred EEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEecceecCCCCCCC---CCCCCccCCCCCCcccch
Q 029640 102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHP---QDESYWGNVNPIGMFSFV 176 (190)
Q Consensus 102 i~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~~~~~~~~---~~e~~~~~~~~~~~~~~y 176 (190)
||+|+......+..++.+.+++|+.++.+++++|++.+ + |+||+||..+||.....+ .+|+ .+..+.+.|
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-----~~~~p~~~Y 159 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-----SQLLPTNPY 159 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-----CCCCCCCCc
Confidence 99999766544445667788999999999999999987 5 899999999999754432 2343 344455678
Q ss_pred hhhhHHHHhhhh
Q 029640 177 LKDGIMKLIGEL 188 (190)
Q Consensus 177 ~~~~~sK~~~E~ 188 (190)
+.+|+.+|+
T Consensus 160 ---~~sK~~aE~ 168 (668)
T PLN02260 160 ---SATKAGAEM 168 (668)
T ss_pred ---HHHHHHHHH
Confidence 888999986
No 32
>PLN02650 dihydroflavonol-4-reductase
Probab=99.83 E-value=1.8e-19 Score=146.10 Aligned_cols=151 Identities=24% Similarity=0.313 Sum_probs=107.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc----CCceEEEeccccccc-----cCCcCEEE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPL-----LIEVDQIY 102 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~-----~~~~d~vi 102 (190)
.++|+||||+||||+++++.|+++ |++|+++.|+...... +..+.. ...+.++.+|+.+.. +.++|+||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKK-VKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHH-HHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 478999999999999999999999 8999988886443322 111111 125788999999864 23699999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEecceecCCCC-CCC-CCCCCccCCC----CCCccc
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL-VHP-QDESYWGNVN----PIGMFS 174 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~~~~~-~~~-~~e~~~~~~~----~~~~~~ 174 (190)
|+|+..... ........+++|+.++.+++++|.+.+ + |+||+||.++|+... ..+ ++|+.|.+.+ +..+.+
T Consensus 83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (351)
T PLN02650 83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW 161 (351)
T ss_pred EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence 999864321 122234688999999999999999876 5 899999998776432 223 5777553221 112234
Q ss_pred chhhhhHHHHhhhh
Q 029640 175 FVLKDGIMKLIGEL 188 (190)
Q Consensus 175 ~y~~~~~sK~~~E~ 188 (190)
.| +.||..+|+
T Consensus 162 ~Y---~~sK~~~E~ 172 (351)
T PLN02650 162 MY---FVSKTLAEK 172 (351)
T ss_pred hH---HHHHHHHHH
Confidence 56 888999986
No 33
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.83 E-value=2.3e-19 Score=143.51 Aligned_cols=151 Identities=23% Similarity=0.310 Sum_probs=106.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---c-CCceEEEeccccccc-----cCCcCEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---G-HPRFELIRHDVTEPL-----LIEVDQI 101 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~-----~~~~d~v 101 (190)
.+++|+||||+||||+++++.|+++ |++|.++.|+...... ...+. . ..++.++.+|+.+.. +.++|+|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 80 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKK-TEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGV 80 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhh-HHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEE
Confidence 4689999999999999999999999 8999988886543221 11111 1 246889999999864 3579999
Q ss_pred EEccCCCCCcccccCc-hhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecce--ecCCC---CCCCCCCCCccCCC-CCCc
Q 029640 102 YHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSE--VYGDP---LVHPQDESYWGNVN-PIGM 172 (190)
Q Consensus 102 i~~ag~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~~--~~~~~---~~~~~~e~~~~~~~-~~~~ 172 (190)
||+|+.... ....+ ..++++|+.++.+++++|++. ++ |+|++||.+ +|+.. ...+++|+.+.... +...
T Consensus 81 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~ 158 (322)
T PLN02662 81 FHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES 158 (322)
T ss_pred EEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence 999986532 22234 378899999999999999887 66 899999976 46532 22356776321100 0111
Q ss_pred ccchhhhhHHHHhhhh
Q 029640 173 FSFVLKDGIMKLIGEL 188 (190)
Q Consensus 173 ~~~y~~~~~sK~~~E~ 188 (190)
...| +.+|+.+|+
T Consensus 159 ~~~Y---~~sK~~~E~ 171 (322)
T PLN02662 159 KLWY---VLSKTLAEE 171 (322)
T ss_pred cchH---HHHHHHHHH
Confidence 2356 888999885
No 34
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.3e-19 Score=144.08 Aligned_cols=143 Identities=37% Similarity=0.482 Sum_probs=108.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-----CCc-CEEEEccC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEV-DQIYHLAC 106 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~-d~vi~~ag 106 (190)
|+|+||||+||||++|++.|+++ |++|.+++|......... ..+.++.+|+.+... ... |+|||+|+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa 73 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA-GHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA 73 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhC-CCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence 34999999999999999999999 999999998665543322 356788888887532 234 99999999
Q ss_pred CCCCccccc-CchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCC-CCCCCCCCCccCCCCCCcccchhhhhHHH
Q 029640 107 PASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGMFSFVLKDGIMK 183 (190)
Q Consensus 107 ~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~-~~~~~~e~~~~~~~~~~~~~~y~~~~~sK 183 (190)
......... ++...+.+|+.++.+++++|++.++ ++||.||.++|+.. ...+++|+. .+..+.+.| +.+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~~Y---g~sK 146 (314)
T COG0451 74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLNPY---GVSK 146 (314)
T ss_pred cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCCHH---HHHH
Confidence 766443322 3566899999999999999999776 89998887877765 333677773 234443466 8889
Q ss_pred Hhhhhc
Q 029640 184 LIGELG 189 (190)
Q Consensus 184 ~~~E~~ 189 (190)
+.+|+.
T Consensus 147 ~~~E~~ 152 (314)
T COG0451 147 LAAEQL 152 (314)
T ss_pred HHHHHH
Confidence 999963
No 35
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.83 E-value=7.2e-20 Score=145.75 Aligned_cols=134 Identities=22% Similarity=0.323 Sum_probs=94.8
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc---------c-----cCCcCE
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---------L-----LIEVDQ 100 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---------~-----~~~~d~ 100 (190)
|+||||+||||++|++.|++. |++++++.|+...... .. .+..+|+.|. . ..++|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~-g~~~v~~~~~~~~~~~-~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTK-FV--------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC-CCceEEEecCCCcchH-HH--------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence 799999999999999999999 7755555443322111 10 1112233221 1 126899
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhh
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDG 180 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~ 180 (190)
|||+||..... ..++...++.|+.++.+++++|++.++++||+||.++|+.....+++|+ .+..+.+.| +
T Consensus 72 Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y---~ 141 (308)
T PRK11150 72 IFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEER-----EYEKPLNVY---G 141 (308)
T ss_pred EEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccC-----CCCCCCCHH---H
Confidence 99999854432 2234567899999999999999998889999999999997655456665 344555667 8
Q ss_pred HHHHhhhh
Q 029640 181 IMKLIGEL 188 (190)
Q Consensus 181 ~sK~~~E~ 188 (190)
.+|+.+|+
T Consensus 142 ~sK~~~E~ 149 (308)
T PRK11150 142 YSKFLFDE 149 (308)
T ss_pred HHHHHHHH
Confidence 88999885
No 36
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.82 E-value=1.9e-19 Score=147.06 Aligned_cols=146 Identities=25% Similarity=0.273 Sum_probs=107.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~a 105 (190)
.+|+|+||||+||||+++++.|+++ |++|++++|........ ......++.+|+.+.. ..++|+|||+|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 93 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSE-----DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA 93 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEecccccccc-----ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence 5689999999999999999999999 89999998854321110 0113567788998753 34799999999
Q ss_pred CCCCCc-ccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCC----CCCCCCCccCCCCCCcccchhhh
Q 029640 106 CPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV----HPQDESYWGNVNPIGMFSFVLKD 179 (190)
Q Consensus 106 g~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~----~~~~e~~~~~~~~~~~~~~y~~~ 179 (190)
+..... ....++...+..|+.++.+++++|++.++ ++||+||..+|+.... .++.|+.. .+..+.+.|
T Consensus 94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~---~p~~p~s~Y--- 167 (370)
T PLN02695 94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDA---WPAEPQDAY--- 167 (370)
T ss_pred cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccC---CCCCCCCHH---
Confidence 865422 11234455678899999999999999887 8999999999996532 13555421 245566677
Q ss_pred hHHHHhhhh
Q 029640 180 GIMKLIGEL 188 (190)
Q Consensus 180 ~~sK~~~E~ 188 (190)
+.+|..+|+
T Consensus 168 g~sK~~~E~ 176 (370)
T PLN02695 168 GLEKLATEE 176 (370)
T ss_pred HHHHHHHHH
Confidence 888999985
No 37
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.82 E-value=1.8e-19 Score=144.21 Aligned_cols=151 Identities=32% Similarity=0.388 Sum_probs=114.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcC-CCeEEEEcCCCCCChhhhhhh-hcCCceEEEeccccccc-----cCCcCEEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEPL-----LIEVDQIYH 103 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~-~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~~~~d~vi~ 103 (190)
++.+++||||+||+|+++++.|++++ ..++.+++..+......-... ..+..+..+++|+.+.. +.++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 56789999999999999999999994 378999888654222111111 12568899999999874 4467 7888
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCC-CCCCCCCccCCCCCCcccchhhhhH
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGMFSFVLKDGI 181 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~-~~~~e~~~~~~~~~~~~~~y~~~~~ 181 (190)
+|+...+.....+++..+++|+.+|.++++.|.+.++ ++||+||.+|...... ..-+|+.+ .|......| +.
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p---~p~~~~d~Y---~~ 155 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLP---YPLKHIDPY---GE 155 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCC---Ccccccccc---ch
Confidence 8877777666667889999999999999999999998 9999999998776655 34455422 223333567 77
Q ss_pred HHHhhhh
Q 029640 182 MKLIGEL 188 (190)
Q Consensus 182 sK~~~E~ 188 (190)
||+.+|+
T Consensus 156 sKa~aE~ 162 (361)
T KOG1430|consen 156 SKALAEK 162 (361)
T ss_pred HHHHHHH
Confidence 7999996
No 38
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.82 E-value=1.6e-19 Score=142.25 Aligned_cols=126 Identities=29% Similarity=0.383 Sum_probs=100.4
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----c--CCcCEEEEccC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----L--IEVDQIYHLAC 106 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~--~~~d~vi~~ag 106 (190)
+|+||||+||||+++++.|+++ |++|+++.|+ .+|+.+.+ + .++|+|||+|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~-g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~ 59 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE-GRVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAA 59 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc-CCEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCc
Confidence 5899999999999999999999 8999999884 23444432 1 24799999998
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHhh
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLIG 186 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~~ 186 (190)
..........+...+++|+.++.++++++++.+.++|++||.++|+.....+++|+. +..+.+.| +.+|..+
T Consensus 60 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~Y---~~~K~~~ 131 (287)
T TIGR01214 60 YTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDD-----ATNPLNVY---GQSKLAG 131 (287)
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCC-----CCCCcchh---hHHHHHH
Confidence 665433344567789999999999999999888899999999999876666788883 44455677 8889999
Q ss_pred hh
Q 029640 187 EL 188 (190)
Q Consensus 187 E~ 188 (190)
|+
T Consensus 132 E~ 133 (287)
T TIGR01214 132 EQ 133 (287)
T ss_pred HH
Confidence 85
No 39
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.82 E-value=4.4e-19 Score=141.62 Aligned_cols=146 Identities=35% Similarity=0.576 Sum_probs=111.1
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEEEccC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLAC 106 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~~ag 106 (190)
+|+||||+|+||+++++.|+++ +++|++++|.................+.++.+|+.+... .++|+|||+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES-GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC-CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECcc
Confidence 5899999999999999999999 888888866443333222222111257788899998742 26999999999
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHHh
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKLI 185 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~ 185 (190)
..........+.+.+..|+.++.+++++|.+.++ ++|++||.++|+.....+++|+ ++..+...| +.+|..
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~~~~~~~y---~~sK~~ 151 (328)
T TIGR01179 80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SPLGPINPY---GRSKLM 151 (328)
T ss_pred ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CCCCCCCch---HHHHHH
Confidence 7654434456677899999999999999998886 8999999999987665577887 344455667 888999
Q ss_pred hhh
Q 029640 186 GEL 188 (190)
Q Consensus 186 ~E~ 188 (190)
+|+
T Consensus 152 ~e~ 154 (328)
T TIGR01179 152 SER 154 (328)
T ss_pred HHH
Confidence 885
No 40
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.81 E-value=6.7e-19 Score=140.03 Aligned_cols=147 Identities=33% Similarity=0.456 Sum_probs=108.3
Q ss_pred EEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCC-ChhhhhhhhcCCceEEEecccccccc-----C--CcCEEEEc
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIYHL 104 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~-----~--~~d~vi~~ 104 (190)
+|+||||+|+||+++++.|+++++ .+|+++.|.... ....+..+.....+.++.+|+.|... . ++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 589999999999999999999832 688888763211 11222222223467888999998642 2 38999999
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC--CeEEEEecceecCCCCCC-CCCCCCccCCCCCCcccchhhhhH
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYGDPLVH-PQDESYWGNVNPIGMFSFVLKDGI 181 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~i~vSS~~~~~~~~~~-~~~e~~~~~~~~~~~~~~y~~~~~ 181 (190)
|+......+...++..+++|+.++.+++++|++.+ .++|++||..+|+..... +++|. .+..+...| +.
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~~~~~~Y---~~ 152 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPLAPSSPY---SA 152 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCCCCCCch---HH
Confidence 98765444455677889999999999999998863 499999999999965432 56676 344455567 88
Q ss_pred HHHhhhh
Q 029640 182 MKLIGEL 188 (190)
Q Consensus 182 sK~~~E~ 188 (190)
+|+.+|.
T Consensus 153 sK~~~e~ 159 (317)
T TIGR01181 153 SKAASDH 159 (317)
T ss_pred HHHHHHH
Confidence 8999885
No 41
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.81 E-value=1e-18 Score=140.40 Aligned_cols=136 Identities=26% Similarity=0.370 Sum_probs=102.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcC-CCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-----CCcCEEEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYH 103 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~d~vi~ 103 (190)
+++|+++||||+|+||+++++.|++++ +++|++++|+..... .+........+.++.+|+.|... .++|+|||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih 80 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW-EMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVH 80 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH-HHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence 367999999999999999999999983 378988887644321 12222223468899999999753 46999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHH
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIM 182 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~s 182 (190)
+||.......+.++.+.+++|+.++.++++++.+.++ ++|++||... ..+.+.| +.|
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-------------------~~p~~~Y---~~s 138 (324)
T TIGR03589 81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-------------------ANPINLY---GAT 138 (324)
T ss_pred CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC-------------------CCCCCHH---HHH
Confidence 9997554444556778999999999999999999886 8999998421 1122456 888
Q ss_pred HHhhhh
Q 029640 183 KLIGEL 188 (190)
Q Consensus 183 K~~~E~ 188 (190)
|+.+|+
T Consensus 139 K~~~E~ 144 (324)
T TIGR03589 139 KLASDK 144 (324)
T ss_pred HHHHHH
Confidence 999885
No 42
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.80 E-value=1.1e-18 Score=139.70 Aligned_cols=143 Identities=28% Similarity=0.420 Sum_probs=108.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~ 107 (190)
|+++||||+|+||+++++.|+++ +++|++++|+...... + ...++.++.+|+.+.. ..++|+|||+|+.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~-~----~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRN-L----EGLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccc-c----ccCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 57999999999999999999999 8999999986544221 1 1236788999999864 3468999999975
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCC-CCCCCCCCCCccCCCCCCcccchhhhhHHHHh
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGMFSFVLKDGIMKLI 185 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~-~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~~ 185 (190)
... ....++..+++|+.++.++++++.+.++ ++|++||.++|+. ....+++|+. +..+...++.|+.+|..
T Consensus 75 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~-----~~~~~~~~~~Y~~sK~~ 147 (328)
T TIGR03466 75 YRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETT-----PSSLDDMIGHYKRSKFL 147 (328)
T ss_pred ccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccC-----CCCcccccChHHHHHHH
Confidence 422 2345678899999999999999998886 8999999999985 3445677773 33322222234888998
Q ss_pred hhh
Q 029640 186 GEL 188 (190)
Q Consensus 186 ~E~ 188 (190)
+|+
T Consensus 148 ~e~ 150 (328)
T TIGR03466 148 AEQ 150 (328)
T ss_pred HHH
Confidence 875
No 43
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.79 E-value=6e-19 Score=140.03 Aligned_cols=129 Identities=22% Similarity=0.214 Sum_probs=96.3
Q ss_pred EEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEEEccCCC
Q 029640 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLACPA 108 (190)
Q Consensus 36 lItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~~ag~~ 108 (190)
|||||+||||++|++.|++. ++.|+++.+.. .+|+.+... .++|+|||+|+..
T Consensus 1 lItGa~GfiG~~l~~~L~~~-g~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~ 60 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL-GFTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAAAKV 60 (306)
T ss_pred CcccCCCcccHHHHHHHHhC-CCcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEeeeee
Confidence 69999999999999999998 66666554321 256655421 2589999999865
Q ss_pred CC-cccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCccc-chhhhhHHHHh
Q 029640 109 SP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFS-FVLKDGIMKLI 185 (190)
Q Consensus 109 ~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~-~y~~~~~sK~~ 185 (190)
.. ..+...+.+.+++|+.++.+++++|+++++ ++|++||+.+|+.....+++|+++.. .+..+.+ .| +.+|..
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y---~~sK~~ 136 (306)
T PLN02725 61 GGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLT-GPPEPTNEWY---AIAKIA 136 (306)
T ss_pred cccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhcc-CCCCCCcchH---HHHHHH
Confidence 42 223345677899999999999999999987 89999999999976667888875321 1333322 47 888999
Q ss_pred hhh
Q 029640 186 GEL 188 (190)
Q Consensus 186 ~E~ 188 (190)
+|+
T Consensus 137 ~e~ 139 (306)
T PLN02725 137 GIK 139 (306)
T ss_pred HHH
Confidence 985
No 44
>PLN02686 cinnamoyl-CoA reductase
Probab=99.79 E-value=2.2e-18 Score=140.66 Aligned_cols=156 Identities=18% Similarity=0.185 Sum_probs=109.4
Q ss_pred cccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-------CCceEEEeccccccc-----c
Q 029640 28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-------HPRFELIRHDVTEPL-----L 95 (190)
Q Consensus 28 ~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~-----~ 95 (190)
..+++++|+||||+||||+++++.|+++ |++|+++.|+..... .+..+.. ...+.++.+|+.|.. +
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 3457899999999999999999999999 899988777543211 1222110 125788899999864 3
Q ss_pred CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecc--eecCCC--C--CCCCCCCCccCC
Q 029640 96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTS--EVYGDP--L--VHPQDESYWGNV 167 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~--~~~~~~--~--~~~~~e~~~~~~ 167 (190)
.++|+|||+|+...+...........++|+.++.+++++|++. ++ |+||+||. .+|+.. . +.+++|+.|...
T Consensus 127 ~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~ 206 (367)
T PLN02686 127 DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE 206 (367)
T ss_pred HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence 4699999999876443211122355688999999999999886 56 89999996 477642 1 234677754322
Q ss_pred -CCCCcccchhhhhHHHHhhhh
Q 029640 168 -NPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 168 -~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.+..+.+.| +.||+.+|+
T Consensus 207 ~~~~~p~~~Y---~~sK~~~E~ 225 (367)
T PLN02686 207 SFCRDNKLWY---ALGKLKAEK 225 (367)
T ss_pred hhcccccchH---HHHHHHHHH
Confidence 233344556 888999986
No 45
>PLN02583 cinnamoyl-CoA reductase
Probab=99.78 E-value=4.2e-18 Score=135.19 Aligned_cols=153 Identities=18% Similarity=0.221 Sum_probs=106.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh--hhhhhhh-cCCceEEEeccccccc-----cCCcCEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWI-GHPRFELIRHDVTEPL-----LIEVDQIY 102 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~--~~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~vi 102 (190)
++++|+||||+|+||+++++.|+++ |++|+++.|+..... ..+..+. ...++.++.+|++|.. +.++|+|+
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSR-GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 5689999999999999999999999 899999888532211 1122221 1236888999999864 35799999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecceec--CCC---CCCCCCCCCccCCCCC-Cccc
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY--GDP---LVHPQDESYWGNVNPI-GMFS 174 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~~~~--~~~---~~~~~~e~~~~~~~~~-~~~~ 174 (190)
|.++..... ....+.++++|+.++.+++++|.+. ++ |+|++||..++ +.. ...+++|+.|.+.... ....
T Consensus 84 ~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 161 (297)
T PLN02583 84 CCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL 161 (297)
T ss_pred EeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence 987644321 1235678999999999999999886 45 89999998764 311 2235777755322111 1112
Q ss_pred chhhhhHHHHhhhhc
Q 029640 175 FVLKDGIMKLIGELG 189 (190)
Q Consensus 175 ~y~~~~~sK~~~E~~ 189 (190)
.| +.||..+|+.
T Consensus 162 ~Y---~~sK~~aE~~ 173 (297)
T PLN02583 162 WH---ALAKTLSEKT 173 (297)
T ss_pred HH---HHHHHHHHHH
Confidence 45 8889999873
No 46
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.4e-18 Score=141.79 Aligned_cols=143 Identities=26% Similarity=0.328 Sum_probs=115.2
Q ss_pred hhcccccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhh---hcCCceEEEecccccccc-----
Q 029640 24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL----- 95 (190)
Q Consensus 24 ~~~~~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~----- 95 (190)
..-..+..+|+|+||||+|.||+.+++.+++.+-.++++++|+......--.++ ++..++.++-+|+.|.+.
T Consensus 242 ~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~ 321 (588)
T COG1086 242 ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAM 321 (588)
T ss_pred HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence 333445689999999999999999999999995578888888655443332222 234788999999999753
Q ss_pred C--CcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCc
Q 029640 96 I--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGM 172 (190)
Q Consensus 96 ~--~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~ 172 (190)
. ++|+|||+|+.-.++.++.+|.+.+++|+.||.|++++|.++++ ++|++||. .-.+|
T Consensus 322 ~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD-------------------KAV~P 382 (588)
T COG1086 322 EGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD-------------------KAVNP 382 (588)
T ss_pred hcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC-------------------cccCC
Confidence 2 49999999998888888999999999999999999999999998 89999982 23334
Q ss_pred ccchhhhhHHHHhhhh
Q 029640 173 FSFVLKDGIMKLIGEL 188 (190)
Q Consensus 173 ~~~y~~~~~sK~~~E~ 188 (190)
.+.| |.+|..+|+
T Consensus 383 tNvm---GaTKr~aE~ 395 (588)
T COG1086 383 TNVM---GATKRLAEK 395 (588)
T ss_pred chHh---hHHHHHHHH
Confidence 4678 888999885
No 47
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.77 E-value=1.7e-18 Score=134.22 Aligned_cols=145 Identities=27% Similarity=0.298 Sum_probs=87.9
Q ss_pred EEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCCh--hhhhhh---------h---cCCceEEEecccccccc------
Q 029640 37 VTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSK--DNLRKW---------I---GHPRFELIRHDVTEPLL------ 95 (190)
Q Consensus 37 ItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~--~~~~~~---------~---~~~~~~~~~~D~~~~~~------ 95 (190)
|||||||||+++++.|++++. .+|+++.|...... +.+... . ...++.++.+|+.++.+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999943 28999999653311 112110 0 15699999999998753
Q ss_pred -----CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCC-----Cc
Q 029640 96 -----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES-----YW 164 (190)
Q Consensus 96 -----~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~-----~~ 164 (190)
.++|+|||||+.+... .+..+.+++|+.++.++++.|..... +++|+||+.+.+.... .+.|. ..
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~ 156 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEEED 156 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH--
T ss_pred hhccccccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-cccccccccccc
Confidence 2599999999876532 24556789999999999999996554 9999999666554332 22221 11
Q ss_pred cCCCCCCcccchhhhhHHHHhhhh
Q 029640 165 GNVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 165 ~~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.........+.| .+||+.+|+
T Consensus 157 ~~~~~~~~~~gY---~~SK~~aE~ 177 (249)
T PF07993_consen 157 DLDPPQGFPNGY---EQSKWVAER 177 (249)
T ss_dssp EEE--TTSEE-H---HHHHHHHHH
T ss_pred cchhhccCCccH---HHHHHHHHH
Confidence 112233334577 888999997
No 48
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.77 E-value=5.2e-18 Score=135.09 Aligned_cols=137 Identities=24% Similarity=0.326 Sum_probs=99.5
Q ss_pred EEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc---------CCcCEEEEc
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYHL 104 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---------~~~d~vi~~ 104 (190)
|+||||+||||+++++.|+++ ++ +|.+++|..... .+..+ ....+..|+.+.+. .++|+|||+
T Consensus 1 ilItGatG~iG~~l~~~L~~~-g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~ 73 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER-GITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQ 73 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc-CCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEEC
Confidence 689999999999999999999 65 788887654322 11111 11234566665421 469999999
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHHHH
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIMKL 184 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~sK~ 184 (190)
|+.... ...++...+++|+.++.+++++|.+.++++|++||+++|+.... +++|+. .+..+.+.| +.+|.
T Consensus 74 A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~----~~~~p~~~Y---~~sK~ 143 (314)
T TIGR02197 74 GACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGR----ELERPLNVY---GYSKF 143 (314)
T ss_pred ccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-Cccccc----CcCCCCCHH---HHHHH
Confidence 986432 34456778999999999999999998889999999999997543 455653 122344567 88899
Q ss_pred hhhh
Q 029640 185 IGEL 188 (190)
Q Consensus 185 ~~E~ 188 (190)
.+|+
T Consensus 144 ~~e~ 147 (314)
T TIGR02197 144 LFDQ 147 (314)
T ss_pred HHHH
Confidence 8884
No 49
>PLN02996 fatty acyl-CoA reductase
Probab=99.77 E-value=1.4e-17 Score=140.37 Aligned_cols=123 Identities=24% Similarity=0.347 Sum_probs=93.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcC--CCeEEEEcCCCCCChh--hhh-hhhc-------------------CCceEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKD--NLR-KWIG-------------------HPRFEL 85 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~--~~~v~~~~r~~~~~~~--~~~-~~~~-------------------~~~~~~ 85 (190)
..+++|+|||||||||+++++.|+... -.+|+++.|....... .+. .+.. ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 488999999999999999999999762 2468888886543221 111 1100 157899
Q ss_pred Eecccccc-------c-----cCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CC-eEEEEecceec
Q 029640 86 IRHDVTEP-------L-----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY 151 (190)
Q Consensus 86 ~~~D~~~~-------~-----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~i~vSS~~~~ 151 (190)
+.+|+.++ . ..++|+|||+|+.+.. ..++...+++|+.++.+++++|++. ++ ++|++||+++|
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy 165 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC 165 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence 99999843 1 2369999999987653 2467788999999999999999986 45 89999999999
Q ss_pred CCCC
Q 029640 152 GDPL 155 (190)
Q Consensus 152 ~~~~ 155 (190)
|...
T Consensus 166 G~~~ 169 (491)
T PLN02996 166 GEKS 169 (491)
T ss_pred cCCC
Confidence 8743
No 50
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.76 E-value=2e-18 Score=134.68 Aligned_cols=132 Identities=28% Similarity=0.398 Sum_probs=94.3
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEE----Eeccccccc-----cC--CcCE
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFEL----IRHDVTEPL-----LI--EVDQ 100 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~----~~~D~~~~~-----~~--~~d~ 100 (190)
|+||||+|.||+.|++.|++.+-..+++++++.........++. +..++.+ +-+|+.|.. +. ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999944789999986544433333331 2334443 468998864 23 7999
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhh
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKD 179 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~ 179 (190)
|||+|+.-.++..+.++.+.+++|+.|+.|++++|.++++ ++|++||.- -.+|.+.|
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDK-------------------Av~Ptnvm--- 138 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDK-------------------AVNPTNVM--- 138 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECG-------------------CSS--SHH---
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc-------------------cCCCCcHH---
Confidence 9999998777778999999999999999999999999998 999999821 22344678
Q ss_pred hHHHHhhhh
Q 029640 180 GIMKLIGEL 188 (190)
Q Consensus 180 ~~sK~~~E~ 188 (190)
|.||..+|+
T Consensus 139 GatKrlaE~ 147 (293)
T PF02719_consen 139 GATKRLAEK 147 (293)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999986
No 51
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.7e-17 Score=143.22 Aligned_cols=144 Identities=31% Similarity=0.342 Sum_probs=106.3
Q ss_pred CEEEEEcccchHHHHHHHHHHh--cCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEeccccccc----------cCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLME--NEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL----------LIE 97 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~--~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~----------~~~ 97 (190)
|+|+||||+||||+++++.|++ . +++|.++.|+.. ...+..+. ...+++++.+|+.+.. ..+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~-g~~V~~l~R~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR-EATVHVLVRRQS--LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC-CCEEEEEECcch--HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcC
Confidence 5799999999999999999995 5 789999998532 22222221 1247899999998842 157
Q ss_pred cCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccch
Q 029640 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFV 176 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y 176 (190)
+|+|||+||..... ......+++|+.++.+++++|++.++ ++||+||..+|+.... +++|+.++. +..+.+.|
T Consensus 78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~--~~~~~~~Y 151 (657)
T PRK07201 78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDE--GQGLPTPY 151 (657)
T ss_pred CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchh--hcCCCCch
Confidence 99999999865432 24566789999999999999999876 8999999999986433 455654321 12223467
Q ss_pred hhhhHHHHhhhh
Q 029640 177 LKDGIMKLIGEL 188 (190)
Q Consensus 177 ~~~~~sK~~~E~ 188 (190)
+.+|+.+|+
T Consensus 152 ---~~sK~~~E~ 160 (657)
T PRK07201 152 ---HRTKFEAEK 160 (657)
T ss_pred ---HHHHHHHHH
Confidence 888999986
No 52
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.74 E-value=3.4e-17 Score=143.03 Aligned_cols=133 Identities=19% Similarity=0.209 Sum_probs=95.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEE-EEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
..|+|+||||+||||++|++.|.++ +++|. ...+ -.....+.. ++ ...++|+|||+|+.+.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~-g~~v~~~~~~--l~d~~~v~~------------~i---~~~~pd~Vih~Aa~~~ 440 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQ-GIAYEYGKGR--LEDRSSLLA------------DI---RNVKPTHVFNAAGVTG 440 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhC-CCeEEeeccc--cccHHHHHH------------HH---HhhCCCEEEECCcccC
Confidence 3478999999999999999999998 77773 2211 001111110 00 1136899999999764
Q ss_pred ---CcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCC------CCCCCCCCCccCCCCCCcccchhhhh
Q 029640 110 ---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP------LVHPQDESYWGNVNPIGMFSFVLKDG 180 (190)
Q Consensus 110 ---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~------~~~~~~e~~~~~~~~~~~~~~y~~~~ 180 (190)
.++++.++...+++|+.++.+++++|++.++++|++||.++|+.. ...+++|++ .+..+.+.| |
T Consensus 441 ~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Y---g 513 (668)
T PLN02260 441 RPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFY---S 513 (668)
T ss_pred CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC----CCCCCCChh---h
Confidence 334567888999999999999999999999988999999998642 123677774 222233678 8
Q ss_pred HHHHhhhh
Q 029640 181 IMKLIGEL 188 (190)
Q Consensus 181 ~sK~~~E~ 188 (190)
.||+.+|+
T Consensus 514 ~sK~~~E~ 521 (668)
T PLN02260 514 KTKAMVEE 521 (668)
T ss_pred HHHHHHHH
Confidence 88999996
No 53
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.74 E-value=7.1e-17 Score=130.67 Aligned_cols=148 Identities=27% Similarity=0.335 Sum_probs=103.6
Q ss_pred EEEEEcccchHHHHHHHHHHhcCC--CeEEEEcCCCCCCh--hhhhhhh----------cCCceEEEecccccccc----
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSK--DNLRKWI----------GHPRFELIRHDVTEPLL---- 95 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~--~~v~~~~r~~~~~~--~~~~~~~----------~~~~~~~~~~D~~~~~~---- 95 (190)
+|+||||+||||+++++.|+++ + .+|+++.|...... ..+.... ...++.++.+|+.++.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~-g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRR-STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhC-CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 5899999999999999999998 5 67999988654221 1111100 00478999999876531
Q ss_pred -------CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCC
Q 029640 96 -------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV 167 (190)
Q Consensus 96 -------~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~ 167 (190)
.++|+|||+|+.... .......+++|+.++.+++++|.+.+. +++++||.++|+.....++.|+.....
T Consensus 80 ~~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~ 156 (367)
T TIGR01746 80 AEWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVT 156 (367)
T ss_pred HHHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccc
Confidence 359999999986542 224456778999999999999998887 699999999998644333344422111
Q ss_pred CCCCcccchhhhhHHHHhhhh
Q 029640 168 NPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 168 ~~~~~~~~y~~~~~sK~~~E~ 188 (190)
........| +.||+.+|+
T Consensus 157 ~~~~~~~~Y---~~sK~~~E~ 174 (367)
T TIGR01746 157 PPPGLAGGY---AQSKWVAEL 174 (367)
T ss_pred cccccCCCh---HHHHHHHHH
Confidence 112223456 888999885
No 54
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.73 E-value=4.3e-17 Score=129.71 Aligned_cols=150 Identities=24% Similarity=0.272 Sum_probs=108.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh--hhhhh---------hcCCceEEEecccccccc------
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--NLRKW---------IGHPRFELIRHDVTEPLL------ 95 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~--~~~~~---------~~~~~~~~~~~D~~~~~~------ 95 (190)
++|++||||||+|.+++.+|+.+...+|+++.|.+..... .+... ....++..+.+|+..+.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 5799999999999999999999855699999986553321 11111 123689999999996643
Q ss_pred -----CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCC----cc
Q 029640 96 -----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESY----WG 165 (190)
Q Consensus 96 -----~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~----~~ 165 (190)
..+|.|||+++.+.. -.+..+....|+.|+..+++.|...+. .++||||++++........+++. ..
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~ 157 (382)
T COG3320 81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT 157 (382)
T ss_pred HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence 249999999986653 234567789999999999999998776 59999999998765443333221 11
Q ss_pred CCCCCCcccchhhhhHHHHhhhh
Q 029640 166 NVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 166 ~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
..........| ++|||.+|+
T Consensus 158 ~~~~~~~~~GY---~~SKwvaE~ 177 (382)
T COG3320 158 RNVGQGLAGGY---GRSKWVAEK 177 (382)
T ss_pred ccccCccCCCc---chhHHHHHH
Confidence 11222234577 899999995
No 55
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.72 E-value=2.3e-17 Score=126.17 Aligned_cols=149 Identities=25% Similarity=0.359 Sum_probs=118.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhc-CCCeEEEEcCCC-CCChhhhhhhhcCCceEEEecccccccc-------CCcCEEEE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYH 103 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~-~~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi~ 103 (190)
++++||||.||||++.+..+... ...+.+.++.-. ......+......+...+++.|+.+... ..+|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 88999999999999999999997 223444433211 1112334444556899999999998743 36999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEecceecCCCCCCCCC-CCCccCCCCCCcccchhhhh
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQD-ESYWGNVNPIGMFSFVLKDG 180 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~~~~~~~~~~-e~~~~~~~~~~~~~~y~~~~ 180 (190)
+|+......+..++.+..+.|+.++..|++.+...+ + ++|++||..|||.....+.. |. ...+|.++| +
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-----s~~nPtnpy---A 158 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-----SLLNPTNPY---A 158 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-----ccCCCCCch---H
Confidence 999888777777888899999999999999999996 4 89999999999987766655 55 577788899 8
Q ss_pred HHHHhhhhc
Q 029640 181 IMKLIGELG 189 (190)
Q Consensus 181 ~sK~~~E~~ 189 (190)
.+|+++|+.
T Consensus 159 asKaAaE~~ 167 (331)
T KOG0747|consen 159 ASKAAAEML 167 (331)
T ss_pred HHHHHHHHH
Confidence 889999973
No 56
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.1e-16 Score=127.45 Aligned_cols=152 Identities=18% Similarity=0.100 Sum_probs=101.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~----------- 95 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+.+........+. ....+.++.+|+.|...
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 37799999999999999999999999 8899999886544333222222 23468889999998642
Q ss_pred -CCcCEEEEccCCCCCcc--cccCchhHHHHHHHHHHH----HHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCC
Q 029640 96 -IEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLN----MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV 167 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~~--~~~~~~~~~~~n~~~~~~----l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~ 167 (190)
.++|+||||||...+.. ..+..+..+++|+.++.. +++.+++.+. ++|++||...+.... ...++..+ .
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~~~--~ 169 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDLQW--E 169 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCccccCc--c
Confidence 35999999999654322 234556789999999554 5555555554 999999987443111 11222211 1
Q ss_pred CCCCcccchhhhhHHHHhhhh
Q 029640 168 NPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 168 ~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.++.+...| +.||++.+.
T Consensus 170 ~~~~~~~~Y---~~SK~a~~~ 187 (306)
T PRK06197 170 RRYNRVAAY---GQSKLANLL 187 (306)
T ss_pred cCCCcHHHH---HHHHHHHHH
Confidence 233333455 888987653
No 57
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.7e-16 Score=126.87 Aligned_cols=150 Identities=15% Similarity=0.048 Sum_probs=105.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~----------- 95 (190)
+++++++||||+++||+++++.|+++ |++|++..|+.+.....+.++. ....+.++.+|+.+...
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999 8999999987654444333332 23468899999998632
Q ss_pred -CCcCEEEEccCCCCCcc---cccCchhHHHHHHHHHHHHHHHHH----HcCCeEEEEecceecCC-CCCCCCCCCCccC
Q 029640 96 -IEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGD-PLVHPQDESYWGN 166 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~i~vSS~~~~~~-~~~~~~~e~~~~~ 166 (190)
.++|+||||||...... ..+..+..+++|+.+...+.+.+. +...++|++||...+.. .....+.++
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~---- 166 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE---- 166 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc----
Confidence 35999999999765322 335567789999999988877664 22348999999765432 111122222
Q ss_pred CCCCCcccchhhhhHHHHhhhh
Q 029640 167 VNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 167 ~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.++.....| +.||++.+.
T Consensus 167 -~~~~~~~~Y---~~SK~a~~~ 184 (313)
T PRK05854 167 -RSYAGMRAY---SQSKIAVGL 184 (313)
T ss_pred -ccCcchhhh---HHHHHHHHH
Confidence 233333455 888987653
No 58
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.71 E-value=8.9e-17 Score=123.09 Aligned_cols=147 Identities=29% Similarity=0.333 Sum_probs=122.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh-h--hhh--hcCCceEEEeccccccc-------cCCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-L--RKW--IGHPRFELIRHDVTEPL-------LIEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~-~--~~~--~~~~~~~~~~~D~~~~~-------~~~~ 98 (190)
++|+.||||-||.-|.+|++.|++. |++|..+.|+....... + .+. .+..++.+..+|++|.. ..++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek-GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK-GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc-CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 3588999999999999999999999 99999998874433221 1 111 22346889999999974 3479
Q ss_pred CEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC---CeEEEEecceecCCCCCCCCCCCCccCCCCCCcccc
Q 029640 99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSF 175 (190)
Q Consensus 99 d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 175 (190)
|-|+|+|+...+..+.+.|+.+.+++..|+.+++++.+..+ +|+...||+..||.....|.+|. +|+.|.++
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~-----TPFyPrSP 154 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP 154 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC-----CCCCCCCH
Confidence 99999999888888889999999999999999999998764 38999999999998888899999 89999999
Q ss_pred hhhhhHHHHhh
Q 029640 176 VLKDGIMKLIG 186 (190)
Q Consensus 176 y~~~~~sK~~~ 186 (190)
| +.+|+.+
T Consensus 155 Y---AvAKlYa 162 (345)
T COG1089 155 Y---AVAKLYA 162 (345)
T ss_pred H---HHHHHHH
Confidence 9 6669875
No 59
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.70 E-value=2.1e-16 Score=126.78 Aligned_cols=121 Identities=14% Similarity=0.138 Sum_probs=90.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
.+++++||||+|+||+++++.|+++ |++|+++.|+..........+. ....+.++.+|+.+... .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999 7999999886544333333321 23468889999998642 24
Q ss_pred cCEEEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHHHH----cC---CeEEEEecceecC
Q 029640 98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~i~vSS~~~~~ 152 (190)
+|+||||||..... .+.+.++..+++|+.++.++++++.. .+ .|+|++||...+.
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 99999999965431 12334667899999999998877753 22 3999999987653
No 60
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.69 E-value=7.4e-16 Score=131.76 Aligned_cols=131 Identities=23% Similarity=0.290 Sum_probs=98.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCC--CeEEEEcCCCCCCh--hhhh-hhh------------c-------CCceE
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSK--DNLR-KWI------------G-------HPRFE 84 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~--~~v~~~~r~~~~~~--~~~~-~~~------------~-------~~~~~ 84 (190)
+..+++|+|||||||||++|++.|++... .+|+++.|...... +.+. .+. + ..++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 45789999999999999999999998632 47888888644321 1111 110 0 24788
Q ss_pred EEecccccccc-----------CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEecceec
Q 029640 85 LIRHDVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVY 151 (190)
Q Consensus 85 ~~~~D~~~~~~-----------~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS~~~~ 151 (190)
.+.+|+.++.+ .++|+|||+|+.... ..+++..+++|+.++.+++++|++.+ . ++||+||+++|
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 99999998631 359999999986652 34677889999999999999998875 4 79999999999
Q ss_pred CCCCCCCCCCCC
Q 029640 152 GDPLVHPQDESY 163 (190)
Q Consensus 152 ~~~~~~~~~e~~ 163 (190)
|...+ .+.|..
T Consensus 273 G~~~G-~i~E~~ 283 (605)
T PLN02503 273 GQRQG-RIMEKP 283 (605)
T ss_pred cCCCC-eeeeee
Confidence 97543 444543
No 61
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.68 E-value=1e-15 Score=125.91 Aligned_cols=122 Identities=24% Similarity=0.293 Sum_probs=91.3
Q ss_pred hcccccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh--hhhh-hcCCceEEEecccccccc-----C
Q 029640 25 FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKW-IGHPRFELIRHDVTEPLL-----I 96 (190)
Q Consensus 25 ~~~~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~--~~~~-~~~~~~~~~~~D~~~~~~-----~ 96 (190)
+......+++|+||||+|+||+++++.|+++ |++|+++.|+....... .... ....++.++.+|++|.+. .
T Consensus 53 ~~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~ 131 (390)
T PLN02657 53 FRSKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLF 131 (390)
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHH
Confidence 3344457899999999999999999999999 89999999875432110 0001 112468899999998642 2
Q ss_pred ----CcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecC
Q 029640 97 ----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ----~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~ 152 (190)
++|+||||++.... .....+++|+.++.++++++++.++ ++|++||.+++.
T Consensus 132 ~~~~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 132 SEGDPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred HhCCCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 59999999874321 1234578899999999999999987 899999988764
No 62
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.68 E-value=5.7e-16 Score=122.01 Aligned_cols=123 Identities=18% Similarity=0.206 Sum_probs=86.7
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCCCc--c
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI--F 112 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~~--~ 112 (190)
|+||||+||||+++++.|+++ +++|+++.|+......... ..+.....+.....+.++|+|||+||..... +
T Consensus 1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~ 74 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKW-----EGYKPWAPLAESEALEGADAVINLAGEPIADKRW 74 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCcccc-----eeeecccccchhhhcCCCCEEEECCCCCcccccC
Confidence 689999999999999999999 8999999997665432110 0111111112223446799999999865432 2
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHcCC---eEEEEecceecCCCCCCCCCCCC
Q 029640 113 YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESY 163 (190)
Q Consensus 113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~i~vSS~~~~~~~~~~~~~e~~ 163 (190)
....+...+++|+.++.+++++|+++++ ++|++||.++|+.....+++|+.
T Consensus 75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~ 128 (292)
T TIGR01777 75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEED 128 (292)
T ss_pred CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCccc
Confidence 2234556789999999999999999875 35556666789976666788874
No 63
>PRK05717 oxidoreductase; Validated
Probab=99.67 E-value=1e-15 Score=118.77 Aligned_cols=120 Identities=17% Similarity=0.093 Sum_probs=89.1
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------C
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~ 96 (190)
.+++++++||||+|+||+++++.|+++ |++|++++|+..........+ ...+.++.+|+.+... .
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKAL--GENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 357899999999999999999999999 889999887644332222222 2367889999998632 2
Q ss_pred CcCEEEEccCCCCCcc------cccCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~~ 151 (190)
++|+|||+||...+.. ..+.++..+++|+.++.++++++.+ .+.++|++||...+
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~ 148 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR 148 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc
Confidence 4899999999754321 1223457899999999999999853 23489999986644
No 64
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.67 E-value=7.6e-16 Score=118.87 Aligned_cols=122 Identities=20% Similarity=0.180 Sum_probs=89.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|...........+.. ...+.++.+|+.+... .
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 36789999999999999999999999 89999999865433222222221 2357788999998742 2
Q ss_pred CcCEEEEccCCCCCc-------ccccCchhHHHHHHHHHHHHHHHHHHc----C-CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPI-------FYKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~i~vSS~~~~~ 152 (190)
.+|+|||+||..... ...+..+..+++|+.++.++++++... + .++|++||...|.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL 150 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence 589999999965321 112234457899999999998887643 2 3899999977653
No 65
>PRK06196 oxidoreductase; Provisional
Probab=99.67 E-value=1.5e-15 Score=121.48 Aligned_cols=148 Identities=18% Similarity=0.090 Sum_probs=99.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+.+........+ ..+.++.+|+.|... .+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l---~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGI---DGVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh---hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 47799999999999999999999999 899999998754433322222 247889999998642 35
Q ss_pred cCEEEEccCCCCCcc--cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecceecCCCCCCCCCCCCccCCCCC
Q 029640 98 VDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI 170 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~ 170 (190)
+|+||||||...... ..+..+..+++|+.++.++++.+ ++.+ .++|++||....... ...+......++
T Consensus 100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~----~~~~~~~~~~~~ 175 (315)
T PRK06196 100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP----IRWDDPHFTRGY 175 (315)
T ss_pred CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC----CCccccCccCCC
Confidence 999999999654321 22345677999999987776654 4444 499999997543211 111111111233
Q ss_pred CcccchhhhhHHHHhhhh
Q 029640 171 GMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 171 ~~~~~y~~~~~sK~~~E~ 188 (190)
.+...| +.||+..+.
T Consensus 176 ~~~~~Y---~~SK~a~~~ 190 (315)
T PRK06196 176 DKWLAY---GQSKTANAL 190 (315)
T ss_pred ChHHHH---HHHHHHHHH
Confidence 333345 888987653
No 66
>PRK06194 hypothetical protein; Provisional
Probab=99.67 E-value=1e-15 Score=120.66 Aligned_cols=122 Identities=11% Similarity=0.023 Sum_probs=88.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+........+.. ..++.++.+|+.|.+. .
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999 89999998865443333333322 3467889999998632 2
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcC-------CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVG-------ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-------~~~i~vSS~~~~~ 152 (190)
++|+|||+||....... .+.+...+++|+.++.++++++ .+.+ .++|++||...+.
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 153 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL 153 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence 48999999997654221 2334456899999999877764 3322 3799999977664
No 67
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.1e-15 Score=118.24 Aligned_cols=115 Identities=21% Similarity=0.257 Sum_probs=85.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d 99 (190)
.++++||||+|+||+++++.|+++ |+.|+++.|+.+.... +.... ..++.++.+|++|... .++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDD-LKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHH-HHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 378999999999999999999999 8899999886432221 11111 2468889999998642 3589
Q ss_pred EEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecce
Q 029640 100 QIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSE 149 (190)
Q Consensus 100 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~ 149 (190)
+|||+||....... .+.....+++|+.++.++++++ ++.+. ++|++||..
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~ 137 (276)
T PRK06482 79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEG 137 (276)
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcc
Confidence 99999997653321 2234567889999999999887 44454 899999964
No 68
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.66 E-value=9e-16 Score=118.98 Aligned_cols=143 Identities=21% Similarity=0.316 Sum_probs=99.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc-c-----c-CCcCEEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-L-----L-IEVDQIYH 103 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~-----~-~~~d~vi~ 103 (190)
.+|+|+||||+|+||+.+++.|+++ +++|+++.|+......... ....+.++.+|+.+. . + .++|+|||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence 4689999999999999999999998 8999998886543222111 123688899999873 1 2 36999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHH
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIM 182 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~s 182 (190)
++|.... .++...+++|..++.++++++++.+. |+|++||..+|+...+.+..+. +...+.|..+..+
T Consensus 92 ~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~-------~~~~~~~~~~~~~ 160 (251)
T PLN00141 92 ATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPA-------YIFLNLFGLTLVA 160 (251)
T ss_pred CCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcc-------hhHHHHHHHHHHH
Confidence 9875321 12233457888999999999998886 8999999999985433232221 1112334444566
Q ss_pred HHhhhh
Q 029640 183 KLIGEL 188 (190)
Q Consensus 183 K~~~E~ 188 (190)
|...|.
T Consensus 161 k~~~e~ 166 (251)
T PLN00141 161 KLQAEK 166 (251)
T ss_pred HHHHHH
Confidence 776663
No 69
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=2.4e-15 Score=115.99 Aligned_cols=122 Identities=16% Similarity=0.082 Sum_probs=90.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+..........+.....+.++.+|+.+... .+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 36789999999999999999999999 889999999765444333333223468899999998643 25
Q ss_pred cCEEEEccCCCCCcc-----cccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecceecC
Q 029640 98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~~~~ 152 (190)
+|+|||++|...... ..+.++..+++|+.++..+++.+.. .+. ++|++||...+.
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR 146 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC
Confidence 899999998643221 2233556799999998887776643 443 899999977655
No 70
>PLN02253 xanthoxin dehydrogenase
Probab=99.65 E-value=2.3e-15 Score=118.27 Aligned_cols=119 Identities=23% Similarity=0.153 Sum_probs=88.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|++++|+.+........+....++.++++|+.|... .+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 46799999999999999999999999 899999988654333323333223468899999998642 25
Q ss_pred cCEEEEccCCCCCc---c---cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 98 VDQIYHLACPASPI---F---YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~~---~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
+|+||||||..... . ..+.++..+++|+.++.++++++.. .+ .++|++||..
T Consensus 95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~ 157 (280)
T PLN02253 95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA 157 (280)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh
Confidence 99999999965321 1 1234567899999999998887753 22 3789998865
No 71
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.65 E-value=1.4e-15 Score=121.80 Aligned_cols=106 Identities=20% Similarity=0.270 Sum_probs=84.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~ 107 (190)
|+|+||||+||||+++++.|+++ |++|+++.|+..... .+. ..+++++.+|+.|.. +.++|+|||+++.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~-~l~----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKAS-FLK----EWGAELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhh-hHh----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 58999999999999999999999 899999998643221 111 236889999999864 4579999999753
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecce
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~ 149 (190)
. ..++...+++|+.++.+++++|++.++ |+|++||.+
T Consensus 75 ~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~ 112 (317)
T CHL00194 75 R-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILN 112 (317)
T ss_pred C-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccc
Confidence 2 123445778899999999999999997 899999854
No 72
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.64 E-value=2.1e-15 Score=116.43 Aligned_cols=122 Identities=17% Similarity=0.175 Sum_probs=94.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC--CceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||++.||.++++.|+++ |++++++.|+.+.......++... ..++.+.+|+++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999999999999999999999 899999999877776666655443 467889999998642
Q ss_pred CCcCEEEEccCCCCCc-ccc---cCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 96 IEVDQIYHLACPASPI-FYK---YNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~-~~~---~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
..+|++|||||..... +.+ +..++.+++|+.++..+.++. .+++. +||.++|...|-
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~ 148 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI 148 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC
Confidence 2599999999976643 222 334467999999987776555 44554 899999977554
No 73
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5.6e-15 Score=116.07 Aligned_cols=119 Identities=16% Similarity=0.035 Sum_probs=86.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++++||||+|+||+++++.|+++ |++|+++.|+.+.... +... ...++..+.+|+.|.+. .++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARAD-FEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHH-HHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999999999999999999999 8999999986543221 1111 12367888999998642 258
Q ss_pred CEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecC
Q 029640 99 DQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYG 152 (190)
Q Consensus 99 d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~ 152 (190)
|+|||+||........ +.....+++|+.++.++++++. +.+. ++|++||...+.
T Consensus 80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~ 142 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI 142 (277)
T ss_pred CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC
Confidence 9999999975432222 2234568999999999998853 3343 899999976543
No 74
>PRK09186 flagellin modification protein A; Provisional
Probab=99.64 E-value=5.6e-15 Score=114.39 Aligned_cols=122 Identities=20% Similarity=0.211 Sum_probs=85.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~----------- 95 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........+. ....+.++.+|+.|.+.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999 8899999887654433333321 12356677899998642
Q ss_pred -CCcCEEEEccCCCCC----cc---cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 96 -IEVDQIYHLACPASP----IF---YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~----~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
..+|+|||||+.... .. ..+.....+++|+.++..+++++ ++.+. ++|++||...+.
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV 150 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence 238999999974321 11 11234456888988887666555 34454 899999976543
No 75
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.64 E-value=5.6e-15 Score=114.76 Aligned_cols=122 Identities=20% Similarity=0.111 Sum_probs=89.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||.++++.|+++ |++|+++.|+....+.....+.. ..++.++.+|+.|... .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46799999999999999999999998 88999998865433322222221 2367889999998642 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc-----CC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----GA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~i~vSS~~~~~ 152 (190)
.+|+|||+||...... ..+..++.+++|+.++.++++++... +. ++|++||...+.
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~ 154 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLG 154 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 5899999998643221 12234567889999999999987554 44 899999976544
No 76
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.64 E-value=3.1e-15 Score=116.16 Aligned_cols=121 Identities=18% Similarity=0.023 Sum_probs=87.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++|||++|+||+++++.|+++ |++|+++.|+.+........+.. ...+.++++|+.+... .
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999 88999999876544433333322 2357788999998642 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHH----HHHHHHHH-HHcCC-eEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLA-KRVGA-RILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~-~~i~vSS~~~~ 151 (190)
.+|+||||||...... ..+..+..+++|+.+ +..+++.+ +..+. ++|++||...+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~ 148 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSH 148 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhc
Confidence 4899999999754321 122345668899999 45556666 55555 89999996543
No 77
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.8e-15 Score=115.62 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=86.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhh-hhhhc-CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWIG-HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~------------ 95 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+.......+ ..+.. ..++.++.+|+.+.+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999 889988888643222221 11111 2357889999998642
Q ss_pred CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
.++|+|||+||.... ....+...+++|+.++.++++.+.+. +.++|++||..
T Consensus 83 ~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~ 137 (248)
T PRK07806 83 GGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQ 137 (248)
T ss_pred CCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCch
Confidence 258999999985432 22345667899999999999999764 23899999954
No 78
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.64 E-value=5.5e-15 Score=111.59 Aligned_cols=117 Identities=19% Similarity=0.044 Sum_probs=92.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
.+|.++||||++.||.++++.|.+. |++|++..|+.+..+....++.+ ..+..+..|++|... .++
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence 5688999999999999999999999 89999999987766655555543 578899999999742 359
Q ss_pred CEEEEccCCCCCcc-c---ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecce
Q 029640 99 DQIYHLACPASPIF-Y---KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~-~---~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~ 149 (190)
|++|||||..-... . .++++..+++|+.|..+..++. .+++. .+|.+||..
T Consensus 83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 99999999765422 1 2345667999999999888776 33443 999999966
No 79
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.63 E-value=4.3e-15 Score=116.54 Aligned_cols=119 Identities=17% Similarity=0.125 Sum_probs=88.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++++||||+|+||+++++.|+++ |++|++++|+........... ...+..+++|+.+... .++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKY--GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhc--cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999999999999999999999 899999988644322211111 2367888999998632 358
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
|+||||||...... ..+...+.+++|+.++.++++.+ ++.+. ++|++||...+.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~ 141 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS 141 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC
Confidence 99999999765322 22345667999999998888776 44454 899999977654
No 80
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.63 E-value=3.5e-15 Score=125.97 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=92.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh----------cCCceEEEeccccccc----
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----------GHPRFELIRHDVTEPL---- 94 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~---- 94 (190)
...+++++||||+|+||+++++.|+++ |++|+++.|+..........+. ...++.++.+|+.+.+
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 346789999999999999999999999 8999999987554332222111 0135788999999864
Q ss_pred -cCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceec
Q 029640 95 -LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151 (190)
Q Consensus 95 -~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~ 151 (190)
+.++|+|||++|..... ..+....+++|+.++.++++++...++ |||++||.+++
T Consensus 156 aLggiDiVVn~AG~~~~~--v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 156 ALGNASVVICCIGASEKE--VFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred HhcCCCEEEEcccccccc--ccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 45799999999864321 123456789999999999999998886 99999997753
No 81
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.63 E-value=3.8e-15 Score=114.79 Aligned_cols=121 Identities=25% Similarity=0.165 Sum_probs=90.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+..........+.. ...+.++.+|+.|... .
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 36789999999999999999999999 88999999975443333333322 2358889999998632 2
Q ss_pred CcCEEEEccCCCCCc----ccccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceec
Q 029640 97 EVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~ 151 (190)
.+|+|||++|...+. ...+.+...+++|+.++.++++.+. +.+. ++|++||...+
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 589999999866541 1223445678999999999988873 3343 89999997655
No 82
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.63 E-value=4.1e-15 Score=115.54 Aligned_cols=119 Identities=12% Similarity=0.066 Sum_probs=86.1
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d 99 (190)
+++++||||+|+||+++++.|+++ |++|++++|+.+........+....++.++.+|+++.+. ..+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 478999999999999999999999 889999998754433222222112268899999998632 2489
Q ss_pred EEEEccCCCCCccc-----ccCchhHHHHHHHHHHHHHHH----HHHcCC-eEEEEecceec
Q 029640 100 QIYHLACPASPIFY-----KYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVY 151 (190)
Q Consensus 100 ~vi~~ag~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~----~~~~~~-~~i~vSS~~~~ 151 (190)
+|||+||....... .+..+..+++|+.++.++++. +++.+. ++|++||...+
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~ 142 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV 142 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence 99999996543211 123556799999999987764 444544 89999986643
No 83
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.7e-15 Score=114.47 Aligned_cols=121 Identities=16% Similarity=0.120 Sum_probs=90.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+........+.. ..++.++.+|+++.+. .
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999 88999999876543333332221 2467889999998642 3
Q ss_pred CcCEEEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEecceec
Q 029640 97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~~ 151 (190)
++|+|||+||..... ...+.++..+++|+.++..+++++.. .+.++|++||...+
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~ 145 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR 145 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc
Confidence 589999999864321 12234556799999999999988864 23489999996543
No 84
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.63 E-value=1.2e-14 Score=111.79 Aligned_cols=122 Identities=20% Similarity=0.138 Sum_probs=89.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhh----h-cCCceEEEecccccccc---------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW----I-GHPRFELIRHDVTEPLL--------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~~~D~~~~~~--------- 95 (190)
+++|+++||||+|+||+++++.|+++ |++|+++.|...........+ . ....+.++.+|+.+...
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD-GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999 888988776543333222221 1 12468889999998642
Q ss_pred ---CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH-----HcCC-eEEEEecceecC
Q 029640 96 ---IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYG 152 (190)
Q Consensus 96 ---~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-~~i~vSS~~~~~ 152 (190)
.++|+|||+||...... ..+.....+++|+.++.++++++. +.+. ++|++||...+.
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 152 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR 152 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC
Confidence 35899999999765321 122345678999999999999887 3443 899999977554
No 85
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.62 E-value=7.2e-15 Score=114.56 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=89.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||.++++.|+++ |++|++++|+.+........+.. ..++.++.+|+.++.. .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999 88999999975443332222211 3468889999998743 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH-----cC-CeEEEEecce
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR-----VG-ARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~-~~~i~vSS~~ 149 (190)
++|+|||+||...... ..+.....+++|+.++.++++++.. .+ .++|++||..
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~ 149 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTM 149 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence 6899999998644321 1234556799999999999998863 23 3899999854
No 86
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.2e-14 Score=115.32 Aligned_cols=122 Identities=16% Similarity=0.104 Sum_probs=88.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------cC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+........+.. ...+.++.+|+.|.+ ..
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG 116 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999 89999999975443332222211 245778899999864 23
Q ss_pred CcCEEEEccCCCCCcccc------cCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~~------~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~ 152 (190)
++|+||||||........ +..+..+++|+.++.++++.+. +.+. ++|++||.+.+.
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 699999999976432211 2234578999999888877653 4444 899999966543
No 87
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.62 E-value=8.6e-15 Score=113.29 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=87.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEE-cCCCCCChhhhhhhhc-CCceEEEecccccccc-------------
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------- 95 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------- 95 (190)
++++++|||++|+||+++++.|+++ |+.|.++ .|+.+........+.. ...+.++.+|+.|...
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLAND-GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999 7888775 5544332222222221 2467889999998642
Q ss_pred -----CCcCEEEEccCCCCCcccccC----chhHHHHHHHHHHHHHHHHHHc--C-CeEEEEecceecC
Q 029640 96 -----IEVDQIYHLACPASPIFYKYN----PVKTIKTNVIGTLNMLGLAKRV--G-ARILLTSTSEVYG 152 (190)
Q Consensus 96 -----~~~d~vi~~ag~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~--~-~~~i~vSS~~~~~ 152 (190)
.++|+|||+||........+. ....+++|+.++.++++.+.+. . .++|++||..++.
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~ 152 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL 152 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC
Confidence 258999999997554322222 2456789999999999988653 2 3899999977654
No 88
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.62 E-value=7.1e-15 Score=113.47 Aligned_cols=121 Identities=17% Similarity=0.074 Sum_probs=89.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........+....++.++++|+.|... .+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 36789999999999999999999999 899999998755433333333223468899999998642 36
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceec
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~ 151 (190)
+|+|||++|...... ..+..+..+++|+.++.++.+.+ ++.+. ++|++||...+
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~ 144 (252)
T PRK06138 82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLAL 144 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence 999999999654322 12234456899999998776655 44454 89999997643
No 89
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=1.5e-14 Score=111.10 Aligned_cols=121 Identities=19% Similarity=0.138 Sum_probs=88.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh--cCCceEEEecccccccc------------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~------------~ 96 (190)
++++++||||+|+||+++++.|+++ |+.|+++.|+.......+.... ...++.++.+|+.+... .
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARA-GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999 8888776665443322222211 13468889999998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
++|+|||+||...... ..+.....+++|+.++.++++.+ ++.+. ++|++||...+.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~ 148 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP 148 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC
Confidence 5899999999654432 12234567899999999998887 34454 899999977653
No 90
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.61 E-value=2.2e-14 Score=111.20 Aligned_cols=119 Identities=20% Similarity=0.145 Sum_probs=88.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........+.. ..++.++++|+.+... .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999 88999998875433332222222 2357889999998642 3
Q ss_pred CcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHHHc----CC-eEEEEecce
Q 029640 97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~i~vSS~~ 149 (190)
.+|+|||+||...+.... +..+..+.+|+.++.++++.+.+. +. ++|++||..
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~ 148 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQ 148 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccch
Confidence 589999999975432221 223557889999999999888643 33 899999854
No 91
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.61 E-value=9.8e-15 Score=114.71 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=83.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------------~~ 97 (190)
++++++||||+|+||+++++.|+++ |++|++++|+.+... .+. ..++.++.+|+.|.+. .+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~----~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVA----ALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHH----HHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999998 899999998644322 222 2357888999998631 25
Q ss_pred cCEEEEccCCCCCcccc----cCchhHHHHHHHHHH----HHHHHHHHcCC-eEEEEeccee
Q 029640 98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTL----NMLGLAKRVGA-RILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~----~l~~~~~~~~~-~~i~vSS~~~ 150 (190)
+|+||||||........ +.....+++|+.++. .+++.+++.+. ++|++||...
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 89999999865543222 223457899999954 55566666665 8999999653
No 92
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2.4e-14 Score=111.84 Aligned_cols=114 Identities=24% Similarity=0.196 Sum_probs=86.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++++||||+|+||+++++.|+++ |++|+++.|+...... ..++.++++|+.|.+. ..+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999999 8999999986543221 2367889999998642 358
Q ss_pred CEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 99 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
|+||||||....... .+..+..+++|+.++.++++.+ ++.+. ++|++||...+.
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 137 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL 137 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC
Confidence 999999997543221 2234567999999998888775 44554 899999966543
No 93
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.60 E-value=1.7e-14 Score=106.39 Aligned_cols=101 Identities=33% Similarity=0.532 Sum_probs=84.0
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCCCC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACPAS 109 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~~~ 109 (190)
|+|+||+|++|+.+++.|+++ +++|+++.|++..... ..+++++.+|+.|.. +.++|+||+++|...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhc
Confidence 789999999999999999999 7999999997553332 568999999999874 357999999996432
Q ss_pred CcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCC
Q 029640 110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV 156 (190)
Q Consensus 110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~ 156 (190)
. +...+.++++++++.++ |+|++|+.++|.....
T Consensus 73 ~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~ 107 (183)
T PF13460_consen 73 K-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPG 107 (183)
T ss_dssp T-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTS
T ss_pred c-------------cccccccccccccccccccceeeeccccCCCCCc
Confidence 2 16677899999999997 9999999999885444
No 94
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.7e-14 Score=112.18 Aligned_cols=116 Identities=22% Similarity=0.081 Sum_probs=86.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-------------cCCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------------LIEV 98 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------------~~~~ 98 (190)
|++++||||+|+||+++++.|+++ |+.|.+++|+.+...+....+ ....+.++++|+.+.. ..++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAEL-GAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999999 899999988654333222222 2346889999999853 2357
Q ss_pred CEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
|+||||||....... .+..+..+++|+.++.++++++.+ .+ .++|++||..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~ 138 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSAS 138 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchh
Confidence 999999997653221 223556799999999999888743 33 4899999865
No 95
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.60 E-value=2.3e-14 Score=112.59 Aligned_cols=119 Identities=18% Similarity=0.131 Sum_probs=87.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc-----------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL-----------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~-----------~ 96 (190)
++++++||||+|+||+++++.|+++ |++|++++|+.+.......... ...++.++.+|+.|.+. .
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence 5688999999999999999999999 8999999887544333222221 12468899999998642 2
Q ss_pred CcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeccee
Q 029640 97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEV 150 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~ 150 (190)
++|+||||||...+.... +.....+++|+.++.++++.+ ++.+. ++|++||...
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~ 143 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG 143 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 589999999865543222 234456889999998888775 44554 8999998643
No 96
>PLN00016 RNA-binding protein; Provisional
Probab=99.60 E-value=9.2e-15 Score=119.79 Aligned_cols=114 Identities=20% Similarity=0.256 Sum_probs=86.5
Q ss_pred CCCEEEEE----cccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh-------hhhhhcCCceEEEeccccccc----c
Q 029640 31 SNMRILVT----GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-------LRKWIGHPRFELIRHDVTEPL----L 95 (190)
Q Consensus 31 ~~~~vlIt----G~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~----~ 95 (190)
++++|+|| ||+||||+++++.|+++ |++|+++.|+....... +..+. ..++.++.+|+.|.. .
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~~~~~ 128 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPADVKSKVAG 128 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHHHHhhhcc
Confidence 45789999 99999999999999999 89999999976532110 11111 235788999998732 2
Q ss_pred CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCC
Q 029640 96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES 162 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~ 162 (190)
.++|+|||+++. +..++.+++++|++.++ ++||+||.++|+.....++.|+
T Consensus 129 ~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~ 180 (378)
T PLN00016 129 AGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG 180 (378)
T ss_pred CCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC
Confidence 369999999752 13357789999999997 8999999999997655566666
No 97
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.60 E-value=2.4e-14 Score=111.22 Aligned_cols=121 Identities=15% Similarity=0.074 Sum_probs=84.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------cC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.. .......+.. ...+.++.+|+.+.+ ..
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999 889999988632 1122222211 246778899999853 13
Q ss_pred CcCEEEEccCCCCC--c---ccccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASP--I---FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~--~---~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
++|+||||||.... . ...+.....+++|+.++..+++.+ ++.+. ++|++||...++
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 149 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG 149 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC
Confidence 58999999985321 1 122334566889998887665544 44554 899999977653
No 98
>PRK06128 oxidoreductase; Provisional
Probab=99.60 E-value=3e-14 Score=113.29 Aligned_cols=122 Identities=16% Similarity=0.110 Sum_probs=89.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh-hhhh-hhh-cCCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLR-KWI-GHPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~-~~~~-~~~-~~~~~~~~~~D~~~~~~----------- 95 (190)
+.+++++||||+|+||+++++.|+++ |++|++..++.+... ..+. .+. ...++.++.+|+.+...
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE-GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999 888888776543211 1121 111 12467888999998632
Q ss_pred -CCcCEEEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceecC
Q 029640 96 -IEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYG 152 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~~ 152 (190)
.++|+||||||..... ...+.++..+++|+.++.++++++... +.++|++||...|.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 197 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ 197 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC
Confidence 3699999999964321 123446678999999999999998753 34899999987764
No 99
>PRK09135 pteridine reductase; Provisional
Probab=99.59 E-value=1.6e-14 Score=111.17 Aligned_cols=138 Identities=17% Similarity=0.121 Sum_probs=94.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhh-hh--cCCceEEEecccccccc------------
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-WI--GHPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~-~~--~~~~~~~~~~D~~~~~~------------ 95 (190)
.+++++|||++|+||+++++.|+++ |++|+++.|+.......+.. +. ....+.++.+|+.+...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAA-GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5588999999999999999999999 89999998864432222211 11 12357889999998642
Q ss_pred CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc----CCeEEEEecceecCCCCCCCCCCCCccCC
Q 029640 96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGNV 167 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~i~vSS~~~~~~~~~~~~~e~~~~~~ 167 (190)
.++|+|||+||...... ..+.++.++++|+.++.++++++.+. +..++.+++.. +.
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~----- 147 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AE----- 147 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hc-----
Confidence 25899999998644321 12345678999999999999998642 22555555421 11
Q ss_pred CCCCcccchhhhhHHHHhhhh
Q 029640 168 NPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 168 ~~~~~~~~y~~~~~sK~~~E~ 188 (190)
.+..+...| +.+|...|.
T Consensus 148 ~~~~~~~~Y---~~sK~~~~~ 165 (249)
T PRK09135 148 RPLKGYPVY---CAAKAALEM 165 (249)
T ss_pred CCCCCchhH---HHHHHHHHH
Confidence 233334566 888988774
No 100
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.59 E-value=2.6e-14 Score=110.61 Aligned_cols=122 Identities=20% Similarity=0.070 Sum_probs=88.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++|||++|+||+++++.|+++ |++|+++.|+..........+. ...++.++.+|+.+... .
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999 8999999997655444333332 13468889999998642 2
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
.+|+|||+||....... ....+..+++|+.++..+++.+ ++.+. ++|++||...+.
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~ 145 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV 145 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc
Confidence 58999999986544221 1224456788999866655544 44555 899999976443
No 101
>PRK06182 short chain dehydrogenase; Validated
Probab=99.59 E-value=3e-14 Score=111.64 Aligned_cols=113 Identities=17% Similarity=0.105 Sum_probs=83.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
.+++++|||++|+||+++++.|+++ |++|+++.|+.+. +..+. ..++.++.+|++|.+. .++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~----l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDK----MEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHH----HHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999999999999999999998 8999999886433 22222 1357889999998642 269
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHH----HHHHHcCC-eEEEEecce
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNML----GLAKRVGA-RILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~-~~i~vSS~~ 149 (190)
|+|||+||...... ..+.++..+++|+.++..++ ..+++.+. ++|++||..
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~ 135 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMG 135 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchh
Confidence 99999999754321 22345667899998865554 45556654 899999965
No 102
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.59 E-value=1.4e-14 Score=115.29 Aligned_cols=121 Identities=21% Similarity=0.168 Sum_probs=97.0
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc----------
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL---------- 95 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~---------- 95 (190)
...+++++|||++..||.++++.|+.+ |.+|+...|+.+........+. ....+.+.++|+.+...
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 357799999999999999999999999 7999999998755554444443 35688889999998642
Q ss_pred --CCcCEEEEccCCCCCcc--cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeccee
Q 029640 96 --IEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEV 150 (190)
Q Consensus 96 --~~~d~vi~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~ 150 (190)
...|++|||||++.+.. .++..+..+.+|+.|.+.+.+.+ +... .|+|++||...
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 35999999999888654 34567889999999998887665 4443 59999999775
No 103
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.5e-14 Score=111.18 Aligned_cols=121 Identities=16% Similarity=0.075 Sum_probs=89.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc---CCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~----------- 95 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+........+.. ..++.++++|+.+++.
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36799999999999999999999999 88999999876544443333322 3468889999998642
Q ss_pred -CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecceec
Q 029640 96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVY 151 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~~ 151 (190)
.++|+||||||...... ..+..+..+++|+.++.++++++.. .+ .++|++||...+
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 149 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF 149 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc
Confidence 35999999999643211 1234556789999999988887643 33 389999996543
No 104
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.2e-14 Score=109.66 Aligned_cols=116 Identities=17% Similarity=0.126 Sum_probs=85.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++++||||+|+||+++++.|+++ |++|++++|+.+........+ ..++.++++|+.+... .++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAEL--GESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999 889999988643322222222 2367888999987532 358
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH---cCCeEEEEecce
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR---VGARILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~i~vSS~~ 149 (190)
|+|||+||...... ..+.++..+++|+.++.++++++.+ ...++|++||..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~ 139 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSIN 139 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechH
Confidence 99999998654321 2234557899999999999999974 234788777744
No 105
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.2e-14 Score=110.23 Aligned_cols=120 Identities=14% Similarity=0.049 Sum_probs=87.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------cCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~~ 97 (190)
++++++||||+|+||.++++.|+++ |++|++++|+.+.......++.. ..++.++.+|+.+.. ..+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999 88999999875544333333321 246788899999863 236
Q ss_pred cCEEEEccCCCCC--cc---cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceec
Q 029640 98 VDQIYHLACPASP--IF---YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~--~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~ 151 (190)
+|+|||+||.... .. ..+..+..+++|+.++..+.+.+ .+.+. ++|++||...+
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 9999999996532 11 12335567999999888776654 33443 89999996644
No 106
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.9e-14 Score=112.06 Aligned_cols=122 Identities=15% Similarity=0.074 Sum_probs=89.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |++|++..|+.+........+.. ..++.++.+|+.|... .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999 88999988875444333333322 2357888999998642 2
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHH----HcC--CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~i~vSS~~~~~ 152 (190)
++|+||||||....... .+..+..+++|+.++.++++.+. +.+ .++|++||...+.
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~ 148 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV 148 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc
Confidence 58999999997543221 22344578999999999988874 333 4899999976553
No 107
>PRK06398 aldose dehydrogenase; Validated
Probab=99.59 E-value=6.9e-14 Score=108.82 Aligned_cols=112 Identities=21% Similarity=0.167 Sum_probs=85.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.... ..+.++++|+.++.. .+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999 89999998865432 257889999998632 35
Q ss_pred cCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecceecC
Q 029640 98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~~~ 152 (190)
+|+||||||....... .+..+..+++|+.++.++++++.+ .+ .++|++||...+.
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 136 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA 136 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc
Confidence 9999999996543221 123445689999999998877743 33 3899999976543
No 108
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=3.4e-14 Score=110.17 Aligned_cols=118 Identities=22% Similarity=0.167 Sum_probs=84.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |+.|+++.++.+.....+. . .++.++.+|+.|+.. .+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~---~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELR---E-KGVFTIKCDVGNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHH---h-CCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 36799999999999999999999999 7888887665432222222 1 257889999998642 35
Q ss_pred cCEEEEccCCCCCc-c---cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecceecC
Q 029640 98 VDQIYHLACPASPI-F---YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~-~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~~~ 152 (190)
+|+||||||..... . ..+..+..+++|+.++..+.+.+ ++.+ .++|++||...++
T Consensus 80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 89999999865321 1 22335567899999976665444 4344 3899999977664
No 109
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=4.2e-14 Score=110.10 Aligned_cols=119 Identities=22% Similarity=0.242 Sum_probs=89.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh---hhhhhcCCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWIGHPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------ 94 (190)
+.+|.|+||||+..||.+++..|+++ |.++.++.|+....+.. +.+.....++..+++|++|.+
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999 77766666655554433 333333336999999999974
Q ss_pred cCCcCEEEEccCCCCCcccccC----chhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecce
Q 029640 95 LIEVDQIYHLACPASPIFYKYN----PVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~ 149 (190)
+.++|++|||||.......+.. ....+++|+.|+..+.+++ ++.+ .+||.+||..
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 3469999999997764332222 2247999999998887766 4555 5999999966
No 110
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=3.8e-14 Score=109.75 Aligned_cols=119 Identities=14% Similarity=0.067 Sum_probs=86.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh-hhhhh-cCCceEEEecccccccc------------CC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++||||+|+||+++++.|+++ |++|+++.|+....... ...+. ...++.++.+|+++... ..
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA-GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999 88999988764432222 22221 12468899999998642 35
Q ss_pred cCEEEEccCCCCCcc------cccCchhHHHHHHHHHHHHHHHHHHc-----C-----C-eEEEEecceec
Q 029640 98 VDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV-----G-----A-RILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~-~~i~vSS~~~~ 151 (190)
+|+||||||...+.. ..+.++..+++|+.++.++++.+.+. + . ++|++||...+
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 151 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI 151 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence 899999998653211 12345567999999999998887432 1 2 69999997654
No 111
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.58 E-value=3.5e-14 Score=109.69 Aligned_cols=120 Identities=19% Similarity=0.100 Sum_probs=87.1
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEeccccccc------------cCCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIEV 98 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~~ 98 (190)
+++++|||++|+||+++++.|+++ |++|+++.|+..........+. ...++.++.+|+.+.+ ..++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999 8899999987543332222221 1246888999999864 2358
Q ss_pred CEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 99 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
|+|||++|....... ....+..++.|+.++..+++.+ ++.+. ++|++||...+.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~ 142 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV 142 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC
Confidence 999999986543221 1224456889999988887776 45555 899999976544
No 112
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.58 E-value=3e-14 Score=110.06 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=83.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcCE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVDQ 100 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d~ 100 (190)
|+++||||+|+||.++++.|+++ |++|+++.|+.+........+ ..++.++.+|+.+... .++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh--ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999999999 899999998654332221111 2367889999998632 26999
Q ss_pred EEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeccee
Q 029640 101 IYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEV 150 (190)
Q Consensus 101 vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~ 150 (190)
|||+||..... ...+.....+++|+.++..+++.+ .+.+. ++|++||...
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 137 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCccc
Confidence 99999864311 122345567899999977766655 44554 8999999654
No 113
>PRK08589 short chain dehydrogenase; Validated
Probab=99.58 E-value=5e-14 Score=110.41 Aligned_cols=120 Identities=18% Similarity=0.121 Sum_probs=87.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+ +........+.. ..++..+.+|+.+... .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999 8999999887 333333333321 2368889999998632 3
Q ss_pred CcCEEEEccCCCCC-c-cc---ccCchhHHHHHHHHHHHHHHHHH----HcCCeEEEEecceec
Q 029640 97 EVDQIYHLACPASP-I-FY---KYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~-~-~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~i~vSS~~~~ 151 (190)
++|+||||||.... . .. .+..+..+++|+.++..+++.+. +.+.++|++||...+
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 145 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ 145 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc
Confidence 58999999997532 1 11 12344578899999987776653 334589999996644
No 114
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.58 E-value=5.6e-14 Score=109.15 Aligned_cols=113 Identities=19% Similarity=0.193 Sum_probs=85.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+..... ...+.++++|+.|.+. .+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA-GARVVTTARSRPDDL--------PEGVEFVAADLTTAEGCAAVARAVLERLGG 77 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC-CCEEEEEeCChhhhc--------CCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999 889999988643211 2367889999998642 35
Q ss_pred cCEEEEccCCCCCc------ccccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceec
Q 029640 98 VDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~ 151 (190)
+|+|||+||..... ...+.++..+++|+.++.++.+.+ ++.+. ++|++||...+
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 142 (260)
T PRK06523 78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR 142 (260)
T ss_pred CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence 89999999854211 123345667899999998776655 34443 89999996544
No 115
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.58 E-value=4.5e-14 Score=110.84 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=87.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------cC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~ 96 (190)
+.+++++||||+|+||+++++.|+++ |+.|++++|+.+........+.. ..++.++++|+.+.. +.
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999 88999999875443333333322 236788999999863 13
Q ss_pred CcCEEEEccCCCCCcc-------------------cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF-------------------YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~-------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~~~ 152 (190)
++|+||||||...+.. ..+.....+++|+.++..+++.+ .+.+ .++|++||...+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 6999999999643321 12234567899999998776554 3344 3899999977654
No 116
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.58 E-value=6.6e-14 Score=107.96 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=87.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc------------C
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++||||+|+||+++++.|+++ +++|+++.|+.+........+. +...+.++.+|+.+.+. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999 7899999887554333222222 13468889999998742 3
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeccee
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEV 150 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~ 150 (190)
++|+|||+||....... .+.....+++|+.++.++++.+. +.+. ++|++||...
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 143 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA 143 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 59999999997553221 12334578999999988887764 3344 8999999654
No 117
>PRK07985 oxidoreductase; Provisional
Probab=99.57 E-value=1.4e-13 Score=109.26 Aligned_cols=122 Identities=21% Similarity=0.191 Sum_probs=88.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC-Chhhhhhhh--cCCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWI--GHPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~~D~~~~~------------ 94 (190)
+++++++||||+|+||+++++.|+++ |++|++..|+... ..+.+.... ...++.++.+|+.+.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~-G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE-GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999 8899888764322 122222221 1235778899999863
Q ss_pred cCCcCEEEEccCCCCC-----cccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceecC
Q 029640 95 LIEVDQIYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYG 152 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~~ 152 (190)
+.++|++||+||.... ....+++++.+++|+.++.++++++... +.++|++||...+.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~ 191 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ 191 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc
Confidence 2358999999985421 1123345678999999999999888653 34899999987664
No 118
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.57 E-value=2.7e-14 Score=110.11 Aligned_cols=122 Identities=21% Similarity=0.126 Sum_probs=88.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~ 97 (190)
++++++||||+|+||+++++.|+++ |++|+++.|+..........+.. ...+.++.+|+.+... .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6789999999999999999999999 88999998865433322222221 2468889999998632 25
Q ss_pred cCEEEEccCCCCCcc-cc---cCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecCC
Q 029640 98 VDQIYHLACPASPIF-YK---YNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGD 153 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~-~~---~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~~ 153 (190)
+|+|||++|...... .. ...+..+++|+.++.++++.+. +.+. ++|++||...+..
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~ 145 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG 145 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC
Confidence 899999998643221 11 2234569999999999888774 3444 8999999876653
No 119
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.57 E-value=5.2e-14 Score=108.60 Aligned_cols=121 Identities=17% Similarity=0.079 Sum_probs=84.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEE-EcCCCCCChhhhhhhhc-CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------ 95 (190)
+.+++++||||+|+||+++++.|+++ |++|++ ..|+.+........+.. ..++.++.+|+.+++.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 777766 45654333222222211 3467889999998742
Q ss_pred CCcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecceec
Q 029640 96 IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVY 151 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~~~ 151 (190)
..+|+|||+||........ +.....+++|+.++.++++++.+ .+. ++|++||...+
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 145 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI 145 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 2589999999864432211 12334678999999999887754 333 89999996543
No 120
>PRK08643 acetoin reductase; Validated
Probab=99.57 E-value=3.9e-14 Score=109.76 Aligned_cols=118 Identities=19% Similarity=0.166 Sum_probs=85.9
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~~ 98 (190)
+++++||||+|+||+++++.|+++ |++|++++|+.+.......++.. ..++.++++|+.+++. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999 88999999875543333333321 2467889999998642 358
Q ss_pred CEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeccee
Q 029640 99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEV 150 (190)
Q Consensus 99 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~~ 150 (190)
|+||||||....... .+..+..+++|+.++..+++.+.. .+ .++|++||...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 142 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG 142 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc
Confidence 999999986432211 223456789999998877766643 22 48999998664
No 121
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.57 E-value=5e-14 Score=111.80 Aligned_cols=122 Identities=20% Similarity=0.134 Sum_probs=89.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+........+.....+..+.+|++|.+. .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999 889999998655433333333223456667799998632 35
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEecceecC
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~~~ 152 (190)
+|+||||||...... ..+..+..+++|+.++.++++.+.. .+.++|++||...+.
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 148 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA 148 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC
Confidence 999999999754321 1223456789999999999888753 234899999976554
No 122
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.57 E-value=4e-14 Score=108.37 Aligned_cols=120 Identities=17% Similarity=0.080 Sum_probs=87.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++++||||+|+||+++++.|+++ |++|+++.|++.........+....++.++++|+.+... .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999998 889999998654333333333222568889999998632 269
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc---C-CeEEEEecceec
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---G-ARILLTSTSEVY 151 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~~~i~vSS~~~~ 151 (190)
|+|||++|...... ..+..++.+++|+.++.++++++.+. + .++|++||...+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 144 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGT 144 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhc
Confidence 99999998654321 12234567899999999988887542 3 379999986543
No 123
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.57 E-value=4.2e-14 Score=110.84 Aligned_cols=121 Identities=21% Similarity=0.146 Sum_probs=87.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc---CCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~----------- 95 (190)
+++++++|||++|+||+++++.|+++ |++|+++.|+.+........+.. ..++.++.+|+.++..
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999 88999999875443332222221 2467888999998642
Q ss_pred -CCcCEEEEccCCCCC--cc---cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecceec
Q 029640 96 -IEVDQIYHLACPASP--IF---YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVY 151 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~--~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~~ 151 (190)
.++|+|||+||.... .. ..+.....+++|+.++.++++.+.+ .+ .+++++||...+
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~ 150 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS 150 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 258999999985432 11 1223456789999999999877643 23 389999997654
No 124
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.57 E-value=4e-14 Score=109.20 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=88.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |+.|+++.|+.. ......+.. ..++..+.+|+++.+. .
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999 889999988542 111111111 2468889999998632 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~~~~ 152 (190)
++|+|||+||...... ..+..++.+++|+.++.++++.+.+ .+ .++|++||...+.
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 145 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ 145 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc
Confidence 5999999999754321 1233556789999999999888743 33 3899999987665
No 125
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.57 E-value=6.3e-14 Score=108.37 Aligned_cols=119 Identities=20% Similarity=0.142 Sum_probs=86.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||.++++.|+++ |++|++++|+.+........+.. ...+.++++|+.+... .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999 88999999865443333333221 2357788999988642 2
Q ss_pred CcCEEEEccCCCCC-----cccccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecce
Q 029640 97 EVDQIYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~ 149 (190)
++|+|||+||.... ....+..+..+++|+.++..+++++ ++.+. ++|++||..
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 147 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVN 147 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchh
Confidence 58999999985421 1112234567999999998887766 33343 899999864
No 126
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=4.5e-14 Score=109.06 Aligned_cols=117 Identities=21% Similarity=0.193 Sum_probs=82.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC-
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE- 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~- 97 (190)
++++++||||+|+||+++++.|+++ |++|++..++.......+.... ..++.++++|+.+... ..
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~-G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFARE-GARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999 7888776554322222222211 2467889999988532 13
Q ss_pred cCEEEEccCCCCC-------cc---cccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecce
Q 029640 98 VDQIYHLACPASP-------IF---YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~-------~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~ 149 (190)
+|++||+||.... .. +.+...+.+++|+.++.++++++.. .+. ++|++||..
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~ 148 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL 148 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 8999999985321 01 1223456799999999999988853 333 899999843
No 127
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.56 E-value=6.9e-14 Score=109.74 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=87.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
.+++++||||+|+||+++++.|+++ |+.|+++.|+.+........+. ...++.++.+|+.+.+. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5589999999999999999999999 8899888886443222222221 12367888999998642 25
Q ss_pred cCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecC
Q 029640 98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~ 152 (190)
+|+|||+||....... .+.....+++|+.++.++++.+. +.+. ++|++||...+.
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~ 151 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR 151 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence 8999999986543221 12344568999999999988764 2333 799999976654
No 128
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.56 E-value=8.6e-14 Score=108.29 Aligned_cols=120 Identities=13% Similarity=0.095 Sum_probs=87.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~~ 98 (190)
+++++||||+|+||+++++.|+++ |++|++++|+..........+.. ...+.++.+|+.+... .++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999998 78999999875443332222221 2467888999998642 268
Q ss_pred CEEEEccCCCCCccccc-----CchhHHHHHHHHHHHHHHHHHH----cCCeEEEEecceecC
Q 029640 99 DQIYHLACPASPIFYKY-----NPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYG 152 (190)
Q Consensus 99 d~vi~~ag~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~~~ 152 (190)
|+||||||........+ ...+.+++|+.++.++++.+.. ...++|++||...+.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT 142 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 99999998655332221 2345689999999999988853 234899999977654
No 129
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.56 E-value=9.5e-14 Score=111.12 Aligned_cols=121 Identities=15% Similarity=0.147 Sum_probs=87.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhh-cCCceEEEeccccccc------------cC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LI 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~ 96 (190)
++++++||||++.||+++++.|+++ | ++|+++.|+.+........+. ....+.++.+|+.+.. ..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~-G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT-GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999 7 899999886544333222221 1246788899999863 23
Q ss_pred CcCEEEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHH----HHcC---CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~~~i~vSS~~~~~ 152 (190)
++|++|||||...+. ...+..+..+++|+.++..+++.+ ++.+ .+||++||...+.
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 599999999964321 122345567999999988886655 3332 4999999987654
No 130
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.56 E-value=8.7e-14 Score=130.13 Aligned_cols=150 Identities=23% Similarity=0.255 Sum_probs=103.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcC---CCeEEEEcCCCCCChhhhhhhh------------cCCceEEEecccccccc-
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENE---KNEVIVVDNYFTGSKDNLRKWI------------GHPRFELIRHDVTEPLL- 95 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~---~~~v~~~~r~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~- 95 (190)
.++|+|||++||||.++++.|++++ ..+|+++.|....... ...+. ...++.++.+|+.++.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 5889999999999999999999883 3788888886433221 11110 01368899999986532
Q ss_pred ----------CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCC--------
Q 029640 96 ----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-------- 156 (190)
Q Consensus 96 ----------~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~-------- 156 (190)
.++|+|||+|+.... ..........|+.++.+++++|.+.+. +++|+||..+|+....
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence 369999999986542 123344456899999999999998876 8999999999974211
Q ss_pred ----CCCCCCCccCCCCCCcccchhhhhHHHHhhhh
Q 029640 157 ----HPQDESYWGNVNPIGMFSFVLKDGIMKLIGEL 188 (190)
Q Consensus 157 ----~~~~e~~~~~~~~~~~~~~y~~~~~sK~~~E~ 188 (190)
..+.|+.+....+......| +.||+.+|+
T Consensus 1127 ~~~~~~~~e~~~~~~~~~~~~~~Y---~~sK~~aE~ 1159 (1389)
T TIGR03443 1127 QAGGAGIPESDDLMGSSKGLGTGY---GQSKWVAEY 1159 (1389)
T ss_pred hccCCCCCcccccccccccCCCCh---HHHHHHHHH
Confidence 12334322112222233456 888999985
No 131
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.56 E-value=5.7e-14 Score=108.38 Aligned_cols=120 Identities=18% Similarity=0.111 Sum_probs=86.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEecccccc--------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEP-------------- 93 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-------------- 93 (190)
+++++++|||++|+||.++++.|++. |+.|++++|+.........++.. ..++.++.+|+.+.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999998 88999999876443333333322 23567777788631
Q ss_pred ccCCcCEEEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeccee
Q 029640 94 LLIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEV 150 (190)
Q Consensus 94 ~~~~~d~vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~ 150 (190)
...++|+|||+||..... ...+..+..+++|+.++.++++++. +.+. ++|++||...
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~ 155 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhh
Confidence 123589999999865431 1123456679999999888888764 3444 8999998653
No 132
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.56 E-value=8e-14 Score=107.91 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|++++|+.+. . .....+.++++|+.+.+. .+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~---~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE---T----VDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh---h----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999 8899999886543 0 113467889999998632 35
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----c-C-CeEEEEecceec
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-G-ARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~i~vSS~~~~ 151 (190)
+|+||||||...... ..+..+..+++|+.++..+++.+.. . + .++|++||...+
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~ 139 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR 139 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC
Confidence 899999998654221 1223456789999999999988753 2 2 389999996644
No 133
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.56 E-value=8.6e-14 Score=108.65 Aligned_cols=121 Identities=17% Similarity=0.121 Sum_probs=88.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEecccccccc-----------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-----------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~-----------~ 96 (190)
+.+++++||||+|.||+++++.|+++ |++|++++|+..........+.. ..++.++.+|+.|+.. .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 46799999999999999999999999 88999999875443333222221 3468889999998632 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~~ 151 (190)
++|++|||||...... ..+.++..+++|+.++..+.+.+ ++.+ .++|++||...+
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~ 148 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK 148 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence 5999999999654321 22345567899988887776555 3444 389999997643
No 134
>PRK08264 short chain dehydrogenase; Validated
Probab=99.56 E-value=1e-13 Score=106.25 Aligned_cols=115 Identities=22% Similarity=0.195 Sum_probs=86.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc--------CCcCEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQI 101 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------~~~d~v 101 (190)
.+++++||||+|+||+++++.|+++ |+ .|+++.|+.+.... ....+.++.+|+.+.+. ..+|+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 5689999999999999999999999 76 99999987554322 13468889999998642 248999
Q ss_pred EEccCCCC-Ccc----cccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecC
Q 029640 102 YHLACPAS-PIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYG 152 (190)
Q Consensus 102 i~~ag~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~ 152 (190)
||++|... ... ..+.....+++|+.++.++++++. ..+. ++|++||...+.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 138 (238)
T PRK08264 78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV 138 (238)
T ss_pred EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc
Confidence 99998732 211 123345678999999999988864 3343 799999976554
No 135
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.56 E-value=9.1e-14 Score=110.06 Aligned_cols=123 Identities=20% Similarity=0.194 Sum_probs=90.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||+|+||.++++.|+++ |++|+++.|+............. ..++.++.+|+.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKE-GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999 89999988865432222222211 2357789999998642
Q ss_pred CCcCEEEEccCCCCCc--c---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceecCC
Q 029640 96 IEVDQIYHLACPASPI--F---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGD 153 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~--~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~~~ 153 (190)
.++|+|||+||..... . ..+.....+++|+.++.++++++... ..++|++||...|..
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~ 188 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG 188 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC
Confidence 2589999999864321 1 12234567999999999999988653 248999999877653
No 136
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1e-13 Score=108.01 Aligned_cols=118 Identities=20% Similarity=0.232 Sum_probs=87.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|++++|+.+........+ ..++.++++|+.+++. ..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASL--GERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 36789999999999999999999999 899999998754333322222 2468889999998742 35
Q ss_pred cCEEEEccCCCCCc---ccccCchhHHHHHHHHHHHHHHHHHH---c-CCeEEEEeccee
Q 029640 98 VDQIYHLACPASPI---FYKYNPVKTIKTNVIGTLNMLGLAKR---V-GARILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~---~-~~~~i~vSS~~~ 150 (190)
+|+||||||..... ...+.+.+.+++|+.++..+++.+.. . +.++|++||...
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 140 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISA 140 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence 89999999864321 12234556789999999988887653 2 248999999664
No 137
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.56 E-value=6.6e-14 Score=108.61 Aligned_cols=116 Identities=17% Similarity=0.173 Sum_probs=87.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
.+++++||||+|+||+++++.|+++ |++|+++.|+.+........+ ...+.++.+|+.+... ..+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEI--GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5689999999999999999999999 899999988655433322222 2357889999998632 358
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc------CCeEEEEecce
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV------GARILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~i~vSS~~ 149 (190)
|+|||+||...... ..+..+..+++|+.++.++++++... +.++|++||..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 142 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA 142 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH
Confidence 99999998654321 12345567999999999999888532 24799999954
No 138
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.56 E-value=4.9e-14 Score=107.08 Aligned_cols=117 Identities=16% Similarity=0.142 Sum_probs=81.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc--------CCcCEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIY 102 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------~~~d~vi 102 (190)
++|+++||||+|+||+++++.|+++ ++|+++.|+...... +... ...+.++++|+.|... .++|+||
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLDE-LAAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHH-HHHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 4579999999999999999999987 789999886433221 1111 2357889999998632 2599999
Q ss_pred EccCCCCCccc----ccCchhHHHHHHHHHHH----HHHHHHHcCCeEEEEecceecC
Q 029640 103 HLACPASPIFY----KYNPVKTIKTNVIGTLN----MLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 103 ~~ag~~~~~~~----~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
|++|....... .+.....+++|+.+... +++.+++...++|++||...++
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~ 134 (227)
T PRK08219 77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLR 134 (227)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcC
Confidence 99987543211 12234457888888544 4445555556999999977654
No 139
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.55 E-value=1.4e-13 Score=106.14 Aligned_cols=120 Identities=18% Similarity=0.100 Sum_probs=86.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
.+++++||||+|+||+++++.|+++ |+.|++..++.+.. +.....+.. ..++.++.+|+.+... .
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQE-GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999998 78887765543222 222222222 2468889999998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~~ 151 (190)
.+|+|||+||...... ..+..++.+++|+.++.++++++.. .+ .++|++||...+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 147 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ 147 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc
Confidence 4899999999754321 1234567799999999999888864 23 389999996543
No 140
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.55 E-value=4.8e-14 Score=108.00 Aligned_cols=121 Identities=18% Similarity=0.243 Sum_probs=91.1
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-cCCcCEEEEccCCCC--Cc
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-LIEVDQIYHLACPAS--PI 111 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~d~vi~~ag~~~--~~ 111 (190)
|+||||||+||++|+..|.+. +|+|+++.|++......+.. .+. ..+-.+.. ..++|+|||.||..- -.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~~-----~v~--~~~~~~~~~~~~~DavINLAG~~I~~rr 72 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLHP-----NVT--LWEGLADALTLGIDAVINLAGEPIAERR 72 (297)
T ss_pred CeEeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcCc-----ccc--ccchhhhcccCCCCEEEECCCCcccccc
Confidence 589999999999999999999 89999999987766543321 112 12222222 237999999999443 23
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHcCC---eEEEEecceecCCCCCCCCCCCC
Q 029640 112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESY 163 (190)
Q Consensus 112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~i~vSS~~~~~~~~~~~~~e~~ 163 (190)
|.+...+.+++--+..|..+.++.++... .+|.-|.++.||......++|+.
T Consensus 73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~ 127 (297)
T COG1090 73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES 127 (297)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC
Confidence 56667788899999999999999886553 46666677789999888999984
No 141
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=8.2e-14 Score=106.92 Aligned_cols=121 Identities=15% Similarity=0.018 Sum_probs=88.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~ 97 (190)
++++++|||++|+||+++++.|+++ |++|+++.|+.....+....+.. ..++.++.+|+.+... .+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999 78999999875543332222221 2468889999988642 36
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecceecC
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~~~~ 152 (190)
+|+|||++|...... ..+...+.+++|+.++.++++.+.. .+. ++|++||...+.
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 148 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK 148 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc
Confidence 999999998654321 1223456789999999988887753 333 799999876443
No 142
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.55 E-value=8.9e-14 Score=107.05 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=86.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh--cCCceEEEecccccccc---------CCcCE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL---------IEVDQ 100 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~---------~~~d~ 100 (190)
||+++||||+|+||+++++.|+++ |++|++++|+.+........+. ...++.++++|+.+... .++|+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence 478999999999999999999999 8999999997654433333222 23478899999998642 24799
Q ss_pred EEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecce
Q 029640 101 IYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSE 149 (190)
Q Consensus 101 vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~ 149 (190)
|||++|....... .+.....+++|+.++..+++.+.. .+. ++|++||..
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 137 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVA 137 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 9999986543211 122345789999999999887754 343 899999864
No 143
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.55 E-value=8.8e-14 Score=107.93 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=88.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |+.|+++.|+.... .....+. ...++.++.+|+.+.+. .
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG 82 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999 88898888876543 2222221 13468899999998642 2
Q ss_pred CcCEEEEccCCCCCcccc---cCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEecceec
Q 029640 97 EVDQIYHLACPASPIFYK---YNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~~ 151 (190)
.+|+|||+||.......+ +..+..+++|+.++.++.+.+.+ ...++|++||...+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 144 (258)
T PRK08628 83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL 144 (258)
T ss_pred CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc
Confidence 589999999964322111 33456789999999998887753 22489999996644
No 144
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.55 E-value=8.9e-14 Score=108.00 Aligned_cols=120 Identities=15% Similarity=0.179 Sum_probs=87.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh--cCCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~------------ 95 (190)
+.+++++||||+|+||+++++.|+++ |+.|+++.|+ ...+ .+.... ...++.++.+|+.+.+.
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG-TNWD-ETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC-cHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36799999999999999999999999 8999998886 2222 222221 12468889999998642
Q ss_pred CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecC
Q 029640 96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYG 152 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~ 152 (190)
..+|++||+||...... ..+..+..+++|+.++..+.+.+. +.+. ++|++||...+.
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ 155 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc
Confidence 25899999999654321 122455678999999888876664 3343 899999976553
No 145
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2.4e-13 Score=105.24 Aligned_cols=118 Identities=20% Similarity=0.136 Sum_probs=87.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |+.|+++.|+... ......+ ....+..+.+|+.+... .+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~-~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDV-AEVAAQL-LGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHH-HHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46799999999999999999999998 8899999886542 1112222 23456788999998641 25
Q ss_pred cCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeccee
Q 029640 98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~ 150 (190)
+|+|||+||....... .+..+..+++|+.++.++++.+.. .+ .++|++||...
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 8999999996543211 223455789999999999988754 23 38999999653
No 146
>PRK12742 oxidoreductase; Provisional
Probab=99.55 E-value=2e-13 Score=104.54 Aligned_cols=116 Identities=16% Similarity=0.114 Sum_probs=82.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc--------cCCcCEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQI 101 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~d~v 101 (190)
+++++++||||+|+||+++++.|+++ |++|+++.++.... ...+.....+.++.+|+.|.. ..++|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~---~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDA---AERLAQETGATAVQTDSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHH---HHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence 36789999999999999999999999 78887776543221 112211224567889998753 2358999
Q ss_pred EEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 102 i~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
||+||...... ..+..+..+++|+.++.++++.+... ..++|++||..
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 99998654211 12345678999999999987666543 24899999954
No 147
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.55 E-value=1.4e-13 Score=105.52 Aligned_cols=119 Identities=18% Similarity=0.179 Sum_probs=87.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
++++++|||++|+||+++++.|+++ |+.|+++.|+..........+. ...++.++.+|+.|... ..
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5689999999999999999999999 8889999987554332222222 13468889999998642 24
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeccee
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~ 150 (190)
+|+|||++|...... ..+.....+++|+.++.++++.+. +.+. ++|++||...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~ 144 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG 144 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 799999998654321 122345578999999999988884 4454 8999998653
No 148
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.55 E-value=1.5e-13 Score=106.63 Aligned_cols=119 Identities=17% Similarity=0.147 Sum_probs=87.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |..|++++|+.+........+.. ..++.++.+|+.+.+. .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG 87 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999 88888888865443332222211 2367888999998642 3
Q ss_pred CcCEEEEccCCCCCccc---ccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecce
Q 029640 97 EVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~ 149 (190)
++|+|||+||...+... .+..+..+++|+.++.++++++. +.+. ++|++||..
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~ 148 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMA 148 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccc
Confidence 58999999996543211 23345568999999999998885 3333 899999965
No 149
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.6e-13 Score=107.45 Aligned_cols=118 Identities=19% Similarity=0.064 Sum_probs=86.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |++|++..|+.+........+ ..+.++.+|+.+.+. .+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAEL---GLVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh---ccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999 889999888654332222221 147788999998642 35
Q ss_pred cCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceec
Q 029640 98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~ 151 (190)
+|++|||||........ +.....+++|+.++.++++.+. +.+. ++|++||...+
T Consensus 79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 141 (273)
T PRK07825 79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGK 141 (273)
T ss_pred CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcccc
Confidence 89999999975432211 2244578999999888776653 4454 89999997644
No 150
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.54 E-value=7.7e-14 Score=108.12 Aligned_cols=120 Identities=12% Similarity=0.046 Sum_probs=87.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+++||+++++.|+++ |++|+++.|+.. +.....+. ...++.++.+|+.+++. .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999 899988877532 11111111 13467889999998742 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~~~~ 152 (190)
++|++|||||...... ..+.++..+++|+.++..+.+.+.. .+ .++|++||...+.
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~ 148 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ 148 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC
Confidence 5999999999654321 2234556789999999888876642 32 4899999977554
No 151
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.1e-13 Score=105.90 Aligned_cols=119 Identities=15% Similarity=0.026 Sum_probs=83.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh-hhhhhhh-cCCceEEEecccccccc------------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
.+++++||||+|+||+++++.|+++ |+.|+++.++..... .....+. ....+.++.+|++|... .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH-GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999998 788877665432221 1112221 13468889999998532 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeccee
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEV 150 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~i~vSS~~~ 150 (190)
++|+||||||...... ..+..+..+++|+.++.++++.+... . .++|+++|...
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~ 149 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV 149 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh
Confidence 4899999998654321 22345667999999999999887643 2 26788876443
No 152
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.54 E-value=2.1e-13 Score=105.81 Aligned_cols=117 Identities=21% Similarity=0.172 Sum_probs=85.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc------------C
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++||||+|+||+++++.|+++ |+.|++++|+..........+. ....+.++.+|+.+... .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999 8999999887544333222221 12468899999998632 3
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecce
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~ 149 (190)
++|+|||+||....... .+..+..+++|+.++.++++.+.+ .+ .++|++||..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~ 143 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS 143 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc
Confidence 58999999986553221 223456689999998888776643 34 3899999854
No 153
>PRK09242 tropinone reductase; Provisional
Probab=99.54 E-value=1.3e-13 Score=107.04 Aligned_cols=122 Identities=11% Similarity=0.085 Sum_probs=90.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------ 94 (190)
+.+++++|||++|+||+.+++.|+++ |++|+++.|+.+.......++. ...++.++.+|+.+..
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999 8999999987544333332222 1346888899999853
Q ss_pred cCCcCEEEEccCCCCCc----ccccCchhHHHHHHHHHHHHHHHHH----HcC-CeEEEEecceecC
Q 029640 95 LIEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYG 152 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~i~vSS~~~~~ 152 (190)
+.++|+|||+||..... ...+..+..+.+|+.++.++++++. +.+ .++|++||...+.
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~ 152 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT 152 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC
Confidence 23699999999864321 1233455679999999999988774 344 3899999976554
No 154
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.1e-13 Score=106.38 Aligned_cols=121 Identities=15% Similarity=0.023 Sum_probs=88.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~ 97 (190)
++++++||||+|+||+.+++.|+++ |++|+++.|+.+........+.. ..++.++.+|+++... .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999 78999999865433322222211 2468889999998642 25
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
+|+|||+||...... ..+.....+++|+.++.++++.+ .+.+. ++|++||...+.
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 147 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN 147 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc
Confidence 899999998654321 11234556899999998887766 33443 899999987664
No 155
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.4e-13 Score=106.45 Aligned_cols=121 Identities=15% Similarity=0.081 Sum_probs=84.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEc-CCCCCChhhhhhhhc-CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||+|+||+++++.|++. |+.|.+.. |+.+........+.. ...+..+.+|+.+...
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND-GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 46799999999999999999999999 88888764 332222222222211 2356778889987420
Q ss_pred ------CCcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceec
Q 029640 96 ------IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVY 151 (190)
Q Consensus 96 ------~~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~ 151 (190)
.++|+||||||........ +..+..+++|+.++..+++++... ..++|++||...+
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~ 149 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR 149 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence 1699999999964322111 224567889999999999877543 2389999997654
No 156
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.5e-13 Score=105.08 Aligned_cols=111 Identities=23% Similarity=0.155 Sum_probs=82.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-----------CCcC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEVD 99 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----------~~~d 99 (190)
.+++++||||+|+||+++++.|+++ |++|+++.|+..... ...++.+|+.+.+. .++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d 70 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL-GHQVIGIARSAIDDF----------PGELFACDLADIEQTAATLAQINEIHPVD 70 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCccccc----------CceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence 4689999999999999999999999 899999988654310 12567889988642 1589
Q ss_pred EEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 100 QIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 100 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
+|||++|....... .+.....+++|+.++.++.+.+ ++.+. ++|++||...|+
T Consensus 71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (234)
T PRK07577 71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG 132 (234)
T ss_pred EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC
Confidence 99999997554221 2234557899999988876665 34444 899999977654
No 157
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.54 E-value=1.2e-13 Score=107.82 Aligned_cols=119 Identities=13% Similarity=0.006 Sum_probs=88.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++|||++|+||+++++.|+++ |+.|+++.|+..........+.. ..++.++.+|+.+... .
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 57799999999999999999999999 88899888865544333333322 2368889999998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
.+|+||||||...... ..+..+..+++|+.++..+.+.+.. .+ .++|++||..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 148 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc
Confidence 5899999999755321 2233556789999999888776643 34 3899999854
No 158
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.54 E-value=8.2e-14 Score=108.50 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------------cCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........+ ..++.++++|+.+.. +.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRF--GDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 36789999999999999999999999 899999988654332222211 235788899999863 235
Q ss_pred cCEEEEccCCCCCc--c---ccc----CchhHHHHHHHHHHHHHHHHHH----cCCeEEEEecceecC
Q 029640 98 VDQIYHLACPASPI--F---YKY----NPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~--~---~~~----~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~~~ 152 (190)
+|++||+||..... . ..+ .++..+++|+.++..+++.+.. .+.++|++||...+.
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 148 (263)
T PRK06200 81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY 148 (263)
T ss_pred CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC
Confidence 99999999964321 1 111 1345678999999888877753 234799999976553
No 159
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.54 E-value=9.4e-14 Score=107.57 Aligned_cols=117 Identities=18% Similarity=0.139 Sum_probs=82.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------CCcCEEEEc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------IEVDQIYHL 104 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------~~~d~vi~~ 104 (190)
+++++||||+|+||+++++.|+++ |+.|+++.|+............ ...++.++.+|+.|... .++|+||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 578999999999999999999999 8999999886433222111111 12357888899998642 279999999
Q ss_pred cCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecce
Q 029640 105 ACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSE 149 (190)
Q Consensus 105 ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~ 149 (190)
||....... .+..+..+++|+.++.++.+.+ .+.+. ++|++||..
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~ 134 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMA 134 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChh
Confidence 996543221 1224456888998887666544 44444 899999865
No 160
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.54 E-value=2.1e-13 Score=106.38 Aligned_cols=113 Identities=22% Similarity=0.215 Sum_probs=86.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+..... ..++.++.+|+.+... ..
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~-G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLAN-GANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999 899999988654432 2367888999998642 35
Q ss_pred cCEEEEccCCCCCc-------------ccccCchhHHHHHHHHHHHHHHHHHHc----C-CeEEEEecceec
Q 029640 98 VDQIYHLACPASPI-------------FYKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~i~vSS~~~~ 151 (190)
+|+|||+||...+. ...+.++..+++|+.++.++++++... + .++|++||...+
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL 149 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence 89999999964321 112334567899999999998887542 3 379999997654
No 161
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.54 E-value=3.1e-13 Score=104.67 Aligned_cols=119 Identities=18% Similarity=0.078 Sum_probs=88.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+.......++.. ..++.++.+|+.+.+. .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999 89999999875544333333322 2357788899998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
++|+|||+||...... ..+.++..+++|+.++.++++.+.. .+ .++|++||..
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~ 147 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQ 147 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccch
Confidence 5899999999653211 1234556799999999888887653 33 3899999864
No 162
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.6e-13 Score=106.64 Aligned_cols=118 Identities=23% Similarity=0.234 Sum_probs=85.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+..... .......++.++.+|+.++.. .+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAAT-AARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH-HHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 47799999999999999999999999 88999999865433322 221222256888999998642 36
Q ss_pred cCEEEEccCCCCCc-----ccccCchhHHHHHHHHHHHHHHHHH----HcCC--eEEEEecce
Q 029640 98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA--RILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--~~i~vSS~~ 149 (190)
+|+|||+||...+. ...+.....+++|+.++..+++.+. ..+. +++++||..
T Consensus 87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~ 149 (264)
T PRK12829 87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA 149 (264)
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccc
Confidence 89999999965221 1223456789999999999888763 3333 577777644
No 163
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.2e-13 Score=106.58 Aligned_cols=119 Identities=20% Similarity=0.137 Sum_probs=86.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~~d 99 (190)
|+++||||+|+||+++++.|+++ |.+|++++|+.+........+.. ...+.++.+|+.+... .++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999999 88999998876554443333322 3467889999998632 3599
Q ss_pred EEEEccCCCCCccccc----CchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 100 QIYHLACPASPIFYKY----NPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
+|||+||.......++ ..+..+++|+.++.++.+.+ .+.+. ++|++||...+.
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 141 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM 141 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC
Confidence 9999999765432222 23446889988888766654 45554 899999976543
No 164
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.54 E-value=1.4e-13 Score=105.78 Aligned_cols=118 Identities=15% Similarity=0.090 Sum_probs=86.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |+.|.+..|+.+........+ ..++.++.+|+.+... .+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAEL--GERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 36789999999999999999999999 788888877544333222222 2467888999998642 35
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeccee
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~ 150 (190)
+|+||||||...+.. ..+.++..+++|+.++.++++++.+ .+ .++|++||...
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 142 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVG 142 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHh
Confidence 999999999754321 2234556789999999988887642 33 38999999653
No 165
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.7e-13 Score=105.44 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=85.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.. .......+. ...++.++.+|+.+... .
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH-GANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36799999999999999999999999 889999988653 222222222 13467889999998632 3
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
++|+|||+||....... .+..++.+++|+.++.++++.+.. .+ .++|++||..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 143 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVT 143 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHH
Confidence 58999999996543221 223445789999999998887653 23 3899999854
No 166
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.5e-13 Score=105.68 Aligned_cols=121 Identities=25% Similarity=0.164 Sum_probs=86.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhh-hhhh-cCCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWI-GHPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~------------ 95 (190)
.++++++||||+|+||+++++.|+++ |+.++++.|+.......+ ..+. ...++.++.+|+.+...
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999 788877766543222211 1121 13468899999998632
Q ss_pred CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc--C-CeEEEEecceec
Q 029640 96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV--G-ARILLTSTSEVY 151 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~i~vSS~~~~ 151 (190)
.++|+|||+||...... ..+..+..+++|+.++.++++.+.+. . .++|++||...+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 144 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA 144 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc
Confidence 25999999999654211 12234567899999999998887653 2 389999986543
No 167
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.54 E-value=3.5e-13 Score=104.68 Aligned_cols=119 Identities=16% Similarity=0.131 Sum_probs=85.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC-Chhhhhhhhc--CCceEEEecccccccc-----------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWIG--HPRFELIRHDVTEPLL-----------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~-----------~ 96 (190)
.+++++||||+|+||+++++.|+++++++|+++.|+.+. ......++.. ..++.++.+|+.|... .
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 568999999999999999999999955899999987664 3333333322 2368899999998542 2
Q ss_pred CcCEEEEccCCCCCccc-ccCc---hhHHHHHHHHHHHH----HHHHHHcCC-eEEEEecce
Q 029640 97 EVDQIYHLACPASPIFY-KYNP---VKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~-~~~~---~~~~~~n~~~~~~l----~~~~~~~~~-~~i~vSS~~ 149 (190)
++|++||++|....... .... .+.+++|+.++..+ ++.+.+.+. ++|++||..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~ 148 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVA 148 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechh
Confidence 69999999987543211 1111 24689999988764 555566554 899999965
No 168
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.4e-13 Score=106.08 Aligned_cols=121 Identities=22% Similarity=0.186 Sum_probs=88.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++|||++|+||+++++.|+++ |++|+++.|+.+........+.. ..++.++.+|+.+... .
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG 83 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 36799999999999999999999999 88999988865443333333221 2468889999998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~~~ 151 (190)
++|+|||++|...... .....+..+++|+.++.++++.+.+ .+. ++|++||...+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 147 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL 147 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhc
Confidence 6999999999654321 1223445688999999999887743 223 89999996644
No 169
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=2.5e-13 Score=104.87 Aligned_cols=121 Identities=15% Similarity=0.009 Sum_probs=84.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC-CChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
.+++++||||+|+||+++++.|+++ +++|++..|+.. ........+.. ...+.++.+|+.+... .
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999998 788777665332 11222222211 2356788899988642 3
Q ss_pred CcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~~ 152 (190)
++|+|||+||........ ...+..+++|+.+..++++++.+. ..++|++||...+.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR 146 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC
Confidence 589999999964432211 123467899999999998888653 23899999977653
No 170
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.53 E-value=1.2e-13 Score=107.08 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=87.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++|||++|.||+++++.|++. |+.|+++.+... .+....+.. ..++..+++|+.|.+. .
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999 889888766432 222222221 2467888999998532 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~~~~ 152 (190)
++|++|||||...... ..++++..+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ 150 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc
Confidence 5999999999654321 2234667899999999988887743 22 3899999977654
No 171
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.53 E-value=2.5e-13 Score=104.27 Aligned_cols=119 Identities=19% Similarity=0.152 Sum_probs=86.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhh-hh-cCCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-WI-GHPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~-~~-~~~~~~~~~~D~~~~~~------------ 95 (190)
+.+++++|||++|+||+++++.|+++ |+.|+++.|+.......... +. ...++.++.+|+.+.+.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46689999999999999999999999 88887777765432222222 21 23468888899998642
Q ss_pred CCcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHHc----CC-eEEEEecce
Q 029640 96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSE 149 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~i~vSS~~ 149 (190)
.++|+|||+||....... .+.++..+++|+.++.++++.+... +. ++|++||..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~ 144 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVV 144 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccc
Confidence 358999999986553221 2234567889999999998888643 33 799999864
No 172
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.4e-13 Score=106.51 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------CCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
+++++||||+|+||+++++.|+++ |+.|++++|+..........+. ...++.++++|+++++. ..+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 478999999999999999999999 8899999887543332222221 12468889999998632 358
Q ss_pred CEEEEccCCCCCc----ccccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeccee
Q 029640 99 DQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEV 150 (190)
Q Consensus 99 d~vi~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~~ 150 (190)
|+|||+||..... .+.+.++..+++|+.++.++++++.+ .+ .++|++||...
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 141 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA 141 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh
Confidence 9999999854321 12223456799999999999988842 22 37999998653
No 173
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.53 E-value=1.6e-13 Score=110.16 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=86.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc---CCceEEEecccccc--c--------c--
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEP--L--------L-- 95 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~--~--------~-- 95 (190)
.++.++||||+|+||+++++.|+++ |++|++++|+.+.......++.. ...+..+.+|+.+. + .
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5789999999999999999999999 88999999976554433333321 24677788898742 1 1
Q ss_pred CCcCEEEEccCCCCCc---cc---ccCchhHHHHHHHHHHHHHHHHH----HcC-CeEEEEecceec
Q 029640 96 IEVDQIYHLACPASPI---FY---KYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVY 151 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~---~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~i~vSS~~~~ 151 (190)
.++|++|||||...+. .. .+..+..+++|+.++..+.+++. +.+ .++|++||...+
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 1366999999975421 11 12344579999999998888764 334 389999997654
No 174
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.53 E-value=4.9e-13 Score=104.87 Aligned_cols=118 Identities=14% Similarity=0.043 Sum_probs=85.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh---hhh----hhh-cCCceEEEecccccccc------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLR----KWI-GHPRFELIRHDVTEPLL------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~---~~~----~~~-~~~~~~~~~~D~~~~~~------ 95 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+.... .+. .+. ...++.++.+|+++.+.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 35789999999999999999999999 8899999887543211 111 111 12467889999998642
Q ss_pred ------CCcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecc
Q 029640 96 ------IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTS 148 (190)
Q Consensus 96 ------~~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~ 148 (190)
.++|+|||+||........ +..+..+++|+.++.++++++.. .+ .++|++||.
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 150 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP 150 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 2699999999965432222 23456789999999999998853 22 378888873
No 175
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.3e-13 Score=105.32 Aligned_cols=122 Identities=20% Similarity=0.145 Sum_probs=88.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++|||++|+||.++++.|+++ |++|+++.|+.+........+.. ..++..+.+|+.+... .
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 36799999999999999999999999 78999999876543333332221 2468889999998632 2
Q ss_pred CcCEEEEccCCCCCc--c---cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPI--F---YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~--~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
++|+|||++|..... . ..+.+++.+++|+.++..+++.+ .+.+. ++|++||...+.
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 149 (253)
T PRK06172 84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG 149 (253)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc
Confidence 579999999864321 1 22345567899999998776654 33443 899999976554
No 176
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.2e-13 Score=105.50 Aligned_cols=122 Identities=17% Similarity=0.085 Sum_probs=89.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++|||++|+||+++++.|+++ |+.|+++.|+.....+....+. ...+..+.+|+.|... .+
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLSQTLPGVP-ADALRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHHHHHHHHh-hcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999 8899999997655444333332 2356778899988532 25
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceecCC
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGD 153 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~~~ 153 (190)
+|+|||++|...... ..+...+.+++|+.++.++++++. +.+. ++|++||...+..
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (239)
T PRK12828 83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA 147 (239)
T ss_pred cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC
Confidence 899999998643221 122234568899999999888774 3344 8999999876653
No 177
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.4e-13 Score=104.55 Aligned_cols=121 Identities=16% Similarity=0.050 Sum_probs=87.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhhc-CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||+|+||+++++.|+++ |++|++++|+.+.. ......+.. ..++.++.+|+.++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999 88999998865432 222222221 2367888999998642
Q ss_pred CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecceec
Q 029640 96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVY 151 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~~~ 151 (190)
.++|+||||||...... ..+..+..+++|+.++..+++++. +.+. ++|++||...+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI 149 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence 35899999999654321 123455678999999988877653 3343 89999986643
No 178
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.52 E-value=2.9e-13 Score=104.97 Aligned_cols=116 Identities=18% Similarity=0.148 Sum_probs=84.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d 99 (190)
+++++||||+|+||+++++.|+++ |++|++++|+..........+ ...++.++.+|+.+.+. .++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADAL-GDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999998 889999998654433322222 23468889999998742 2489
Q ss_pred EEEEccCCCCCccc-ccC---chhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecce
Q 029640 100 QIYHLACPASPIFY-KYN---PVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSE 149 (190)
Q Consensus 100 ~vi~~ag~~~~~~~-~~~---~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~ 149 (190)
+|||++|....... +.+ ....+.+|+.++.++++.+. +.+. ++|++||..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 138 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVN 138 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchh
Confidence 99999986543211 112 23457799999998888773 3343 799999854
No 179
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.52 E-value=2.4e-13 Score=106.09 Aligned_cols=120 Identities=18% Similarity=0.157 Sum_probs=86.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+.+ |+.|+++.|+.+........+.. ..++.++.+|+++... .
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999998 89999999875443322222211 2356788999998642 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEeccee
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEV 150 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~ 150 (190)
++|+|||+||...... ..+.....+++|+.++.++++++.. .+.++|++||...
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~ 147 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQA 147 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhh
Confidence 5899999998543211 1223455788999999999887754 2348999999653
No 180
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.52 E-value=3.2e-13 Score=104.69 Aligned_cols=121 Identities=15% Similarity=0.100 Sum_probs=89.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+.+++.|+++ |+.|+++.|+.+........+.. ..++.++.+|+.++.. .
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999998 89999999975433332222221 3468889999998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~~~ 151 (190)
++|+|||++|...... ..+..++.+++|+.++.++++.+.+ .+. ++|++||...+
T Consensus 88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~ 151 (256)
T PRK06124 88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ 151 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc
Confidence 5899999999654321 1223456789999999998876643 444 89999996543
No 181
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.52 E-value=2e-13 Score=106.27 Aligned_cols=119 Identities=20% Similarity=0.158 Sum_probs=85.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++++||||+|+||+++++.|+++ |++|++++|+.+.... +... ...++.++.+|+.+... .+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQE-LEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH-HHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 36799999999999999999999999 8999999886533222 1111 12357888999998531 35
Q ss_pred cCEEEEccCCCCCc--c---cc----cCchhHHHHHHHHHHHHHHHHHHc----CCeEEEEecceec
Q 029640 98 VDQIYHLACPASPI--F---YK----YNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~--~---~~----~~~~~~~~~n~~~~~~l~~~~~~~----~~~~i~vSS~~~~ 151 (190)
+|++|||||..... . .. +.++..+++|+.++.++++++.+. +.++|++||...+
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~ 146 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF 146 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee
Confidence 89999999864211 1 11 124567999999999998888542 2378888886543
No 182
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.3e-13 Score=103.77 Aligned_cols=104 Identities=17% Similarity=0.123 Sum_probs=76.2
Q ss_pred cccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEE
Q 029640 28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIY 102 (190)
Q Consensus 28 ~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi 102 (190)
+.+++++++||||+|+||+++++.|+++ |++|+++.|+...... ..... ....+.+|+.+.+ +.++|++|
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~---~~~~~-~~~~~~~D~~~~~~~~~~~~~iDilV 84 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSE---SNDES-PNEWIKWECGKEESLDKQLASLDVLI 84 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhh---hhccC-CCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence 3357799999999999999999999999 8899988886522111 11111 2256788998764 34699999
Q ss_pred EccCCCCCc-ccccCchhHHHHHHHHHHHHHHHHH
Q 029640 103 HLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAK 136 (190)
Q Consensus 103 ~~ag~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~ 136 (190)
||||..... ...+.+...+++|+.++.++++.+.
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 119 (245)
T PRK12367 85 LNHGINPGGRQDPENINKALEINALSSWRLLELFE 119 (245)
T ss_pred ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999964322 2234566789999999999988774
No 183
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.9e-13 Score=103.32 Aligned_cols=118 Identities=20% Similarity=0.150 Sum_probs=86.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc--------CCcCEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQI 101 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------~~~d~v 101 (190)
+++++++|||++|+||+++++.|+++ |++|+++.|+.+... .+.......++.+|+.+... .++|+|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALD----RLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGL 81 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHH----HHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 46789999999999999999999999 889999998654322 22112245778899988642 258999
Q ss_pred EEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc----C--CeEEEEecceecC
Q 029640 102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYG 152 (190)
Q Consensus 102 i~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~i~vSS~~~~~ 152 (190)
||+||...... ..+..++.+.+|+.++.++++++.+. + .++|++||...+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV 142 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC
Confidence 99998654321 12334556789999999998887542 2 4899999976554
No 184
>PRK12743 oxidoreductase; Provisional
Probab=99.52 E-value=2.6e-13 Score=105.34 Aligned_cols=117 Identities=15% Similarity=0.045 Sum_probs=84.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhh-hhhh-cCCceEEEecccccccc------------CC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++||||+|+||+++++.|+++ |++|+++.++.......+ ..+. ....+.++.+|+.+.+. ..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999 889888765433222222 2221 13468899999998642 35
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc----C--CeEEEEecce
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~i~vSS~~ 149 (190)
+|+|||++|...... ..+..+..+.+|+.++..+++++... + .++|++||..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 142 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH 142 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc
Confidence 899999998654321 12345567999999999998877542 2 3899999853
No 185
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.52 E-value=1.6e-13 Score=99.64 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=88.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC--CCCChhhhhhhh-cCCceEEEecccccccc------------CC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY--FTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~--~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
|+++||||++.||+++++.|+++++..|+++.|+ .+........+. ...++.++++|+.+.+. ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5799999999999999999999955688888886 222222222222 24688999999998742 35
Q ss_pred cCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceec
Q 029640 98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~ 151 (190)
+|++|||+|........ +..+..+++|+.+...+.+.+...+. ++|++||....
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV 139 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc
Confidence 99999999977643222 23446799999999999998887544 89999996543
No 186
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=3.1e-13 Score=107.76 Aligned_cols=121 Identities=19% Similarity=0.068 Sum_probs=87.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh-hhhhhhhc-CCceEEEeccccccc-----------cC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIG-HPRFELIRHDVTEPL-----------LI 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~-----------~~ 96 (190)
+++++++||||+|+||+++++.|+++ |..|++.++...... .....+.. ..++.++.+|+.+.+ +.
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g 88 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG 88 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999 888888877543222 22222221 346888999999852 23
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----c-------C-CeEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-------G-ARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-------~-~~~i~vSS~~~~ 151 (190)
++|+||||||...... ..+.+...+++|+.++.++++++.. . . .++|++||...+
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 159 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL 159 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc
Confidence 5899999999765421 2234556789999999999887642 1 1 379999986543
No 187
>PRK12320 hypothetical protein; Provisional
Probab=99.52 E-value=1.2e-13 Score=119.70 Aligned_cols=99 Identities=26% Similarity=0.397 Sum_probs=80.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc----CCcCEEEEccCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----IEVDQIYHLACPA 108 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~d~vi~~ag~~ 108 (190)
|+|+||||+||||+++++.|+++ |++|++++|..... ....++++.+|+.+... .++|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~-G~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA-GHTVSGIAQHPHDA--------LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCChhhc--------ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccC
Confidence 57999999999999999999999 89999998854321 12367889999988642 4799999999753
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~ 148 (190)
.. ....+|+.++.+++++|++.++|+||+||.
T Consensus 72 ~~--------~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~ 103 (699)
T PRK12320 72 TS--------APGGVGITGLAHVANAAARAGARLLFVSQA 103 (699)
T ss_pred cc--------chhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 21 113589999999999999999999999986
No 188
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=3.9e-13 Score=104.28 Aligned_cols=122 Identities=16% Similarity=0.074 Sum_probs=86.1
Q ss_pred cCCCEEEEEcccc--hHHHHHHHHHHhcCCCeEEEEcCCCC-----------CChhhhhhhh-cCCceEEEecccccccc
Q 029640 30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFT-----------GSKDNLRKWI-GHPRFELIRHDVTEPLL 95 (190)
Q Consensus 30 ~~~~~vlItG~~G--~iG~~l~~~L~~~~~~~v~~~~r~~~-----------~~~~~~~~~~-~~~~~~~~~~D~~~~~~ 95 (190)
+++++++||||+| .||.++++.|+++ |++|+++.|+.. ........+. ...++.++.+|+.+...
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAK-GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHc-CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3678999999995 7999999999999 789999988621 1111111111 12468899999998642
Q ss_pred ------------CCcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHHc----C-CeEEEEecceecC
Q 029640 96 ------------IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYG 152 (190)
Q Consensus 96 ------------~~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~i~vSS~~~~~ 152 (190)
..+|+|||+||....... .+..+..+++|+.++.++++++... + .++|++||...+.
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 358999999986543211 2234567899999999999887542 3 3899999976544
No 189
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.51 E-value=2.7e-13 Score=105.05 Aligned_cols=119 Identities=17% Similarity=0.081 Sum_probs=86.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+.+........+.. ..++..+.+|+.++.. .
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999 89999998865443333222221 2467888999998642 3
Q ss_pred CcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecce
Q 029640 97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~ 149 (190)
++|+||||||....... .+..+..+++|+.++..+++++.. .+ .++|++||..
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~ 148 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMS 148 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHH
Confidence 69999999996543211 223445689999999999887742 22 3688998854
No 190
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.51 E-value=3.4e-13 Score=103.88 Aligned_cols=118 Identities=15% Similarity=0.072 Sum_probs=81.9
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhh-hhhh-cCCceEEEecccccccc------------CC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++||||+|+||+++++.|+++ |+.|.+..++.+.....+ ..+. ....+.++.+|+.|... ..
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER-GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999 777777664432221112 1121 12357789999998642 25
Q ss_pred cCEEEEccCCCCCcc-----cccCchhHHHHHHHHHHHHHHHHHHc--------CCeEEEEeccee
Q 029640 98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~i~vSS~~~ 150 (190)
+|+|||+||...... ..+.....+++|+.++.++++.+.+. +.++|++||...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~ 146 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAA 146 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhh
Confidence 899999999754321 11234467999999999988877542 126999999754
No 191
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=1.8e-13 Score=105.22 Aligned_cols=122 Identities=16% Similarity=0.082 Sum_probs=88.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEE-cCCCCCChhhhhhhhc-CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||+|+||+++++.|+++ |++|+++ .|+..........+.. ..++.++.+|+.+...
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 36789999999999999999999998 8888888 7765443332222221 3468889999998642
Q ss_pred CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecceecC
Q 029640 96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYG 152 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~~~~ 152 (190)
.++|+|||++|...... ..+..+..+++|+.++.++++.+.. .+. ++|++||...+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 147 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI 147 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc
Confidence 26999999999763221 1223456789999998888877753 333 799999976443
No 192
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.51 E-value=1.3e-14 Score=108.84 Aligned_cols=145 Identities=21% Similarity=0.215 Sum_probs=105.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------CCcCEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIY 102 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~d~vi 102 (190)
.--+|+|||+-|.+|..+++.|..+-|. .|++.+-. +.....+ ..-.++..|+.|... .++|.+|
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~-KPp~~V~------~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIV-KPPANVT------DVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhcc-CCchhhc------ccCCchhhhhhccccHHHhhcccccceee
Confidence 4468999999999999999999998454 44444332 2222211 133556677777532 3699999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhHH
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGIM 182 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~s 182 (190)
|..+..+. ..+.+-....++|+.|..|+++.+++++.++...|+.++||+..+..-+.+. +..++...| |.|
T Consensus 116 HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdl----tIQRPRTIY---GVS 187 (366)
T KOG2774|consen 116 HFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDL----TIQRPRTIY---GVS 187 (366)
T ss_pred eHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCe----eeecCceee---chh
Confidence 99764332 2355666678999999999999999999999999999999986654433332 677788888 888
Q ss_pred HHhhhhcC
Q 029640 183 KLIGELGG 190 (190)
Q Consensus 183 K~~~E~~~ 190 (190)
|..+|..|
T Consensus 188 KVHAEL~G 195 (366)
T KOG2774|consen 188 KVHAELLG 195 (366)
T ss_pred HHHHHHHH
Confidence 99999754
No 193
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.8e-13 Score=104.20 Aligned_cols=120 Identities=13% Similarity=0.083 Sum_probs=88.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-----------CCc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEV 98 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----------~~~ 98 (190)
+++++++||||+|+||+++++.|+++ |++|++++|+.+........+....++.++.+|+.|... ..+
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 35789999999999999999999999 899999998754433333333224578899999998642 358
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeccee
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEV 150 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~ 150 (190)
|+|||+||...... ..+.....+++|+.++.++++.+.+ .+ .++|++||...
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~ 142 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFG 142 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhh
Confidence 99999998654321 1123456788999999999888753 33 37888888553
No 194
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.51 E-value=5.2e-13 Score=103.64 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=80.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhh----hhhc-CCceEEEecccccccc---------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIG-HPRFELIRHDVTEPLL--------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~--------- 95 (190)
+++++++|||++|+||+++++.|+++ |+.|.++.++......... .+.. ..++.++++|+.+.+.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~-G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQ-GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC-CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 36789999999999999999999998 7776666544332222211 1111 2368889999998632
Q ss_pred ---CCcCEEEEccCCCCCc----ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEec
Q 029640 96 ---IEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTST 147 (190)
Q Consensus 96 ---~~~d~vi~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS 147 (190)
.++|+|||+||..... ...+..+..+++|+.++..+++.+... ..++++++|
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~s 146 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVT 146 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEec
Confidence 3589999999964321 122345567999999999999888653 236666643
No 195
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.51 E-value=3.3e-13 Score=108.93 Aligned_cols=122 Identities=10% Similarity=0.024 Sum_probs=87.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........+.. ..++.++.+|+.|.+. .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 36789999999999999999999999 88999999865443333322221 3467889999998642 3
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHH----HHHcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-~~i~vSS~~~~~ 152 (190)
++|++|||||...... ..+..+..+++|+.+..++.+. +++.+. ++|++||...+.
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~ 149 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR 149 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc
Confidence 5999999999654321 1223455788988877765544 445443 899999987664
No 196
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.50 E-value=4.3e-13 Score=104.34 Aligned_cols=119 Identities=15% Similarity=0.088 Sum_probs=83.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhh-hhhc-CCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR-KWIG-HPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||+|+||+++++.|+++ |+.|++..|+......... .+.. ..++.++.+|+.+.+.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~-G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE-KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999 7888887775432222221 2211 2467788999998642
Q ss_pred CCcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHH----HHHHcC--CeEEEEecce
Q 029640 96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLG----LAKRVG--ARILLTSTSE 149 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~----~~~~~~--~~~i~vSS~~ 149 (190)
.++|++||+||....... .+..+..+++|+.++..+++ .+.+.+ .++|++||..
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~ 147 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVH 147 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccc
Confidence 258999999996544222 12345678999888876554 445444 3899999853
No 197
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.50 E-value=3.9e-13 Score=103.20 Aligned_cols=119 Identities=19% Similarity=0.169 Sum_probs=83.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEeccccccc-------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------- 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~------------- 94 (190)
+.+++++||||+|+||+++++.|+++ |+.|++++|+..........+.. ...+.++.+|+.+..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 46789999999999999999999998 88999999976544333332221 234567778886521
Q ss_pred -c-CCcCEEEEccCCCCC--ccc---ccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 95 -L-IEVDQIYHLACPASP--IFY---KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 95 -~-~~~d~vi~~ag~~~~--~~~---~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
. .++|+|||+||.... ... .+...+.+++|+.++.++++++.+ .+ .++|++||..
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~ 149 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESH 149 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 1 358999999996432 111 223445789999999888877743 33 3899998843
No 198
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2e-13 Score=105.87 Aligned_cols=118 Identities=21% Similarity=0.115 Sum_probs=84.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+..........+ ...++++|+.+... .+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYGS 79 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999 899999988644322222221 22578899998642 35
Q ss_pred cCEEEEccCCCCCcc------cccCchhHHHHHHHHHHHHHHHHH----HcC-CeEEEEecce-ecC
Q 029640 98 VDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSE-VYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~i~vSS~~-~~~ 152 (190)
+|+|||+||...+.. ..+..+..+++|+.++.++++.+. +.+ .++|++||.. +++
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g 146 (255)
T PRK06057 80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG 146 (255)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC
Confidence 899999998653211 112355678999999988777653 333 3899998854 444
No 199
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.50 E-value=3e-13 Score=103.64 Aligned_cols=113 Identities=19% Similarity=0.114 Sum_probs=82.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d 99 (190)
+++++||||+|+||+++++.|+++ |++|+++.|+.......+.. .++.++.+|+.+.+. .++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 478999999999999999999999 89999999876543333222 236788999998632 3599
Q ss_pred EEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC---CeEEEEecce
Q 029640 100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSE 149 (190)
Q Consensus 100 ~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~i~vSS~~ 149 (190)
++|||||...... ..+..+..+++|+.++..+.+.+.. .+ .++|++||..
T Consensus 77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~ 137 (236)
T PRK06483 77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYV 137 (236)
T ss_pred EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchh
Confidence 9999998643321 1234556789999999877666643 22 3799998854
No 200
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2.7e-13 Score=105.04 Aligned_cols=121 Identities=15% Similarity=0.097 Sum_probs=87.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+.+........+. ...++.++.+|+.+.+. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46799999999999999999999999 8899999887554333222221 12467889999987632 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc-------------CCeEEEEecceec
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-------------GARILLTSTSEVY 151 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~i~vSS~~~~ 151 (190)
++|+|||++|...... ..+.++..+++|+.++.++++.+... +.++|++||...+
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 157 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL 157 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence 5899999999644321 12345567899999999888876421 1389999987654
No 201
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.50 E-value=4.8e-13 Score=104.22 Aligned_cols=121 Identities=17% Similarity=0.087 Sum_probs=87.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc---CCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~----------- 95 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........+.. ..++..+.+|+.|...
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999 88999999976544333222221 2367788999998632
Q ss_pred -CCcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecceec
Q 029640 96 -IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVY 151 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~~ 151 (190)
.++|+||||||....... .+.+...+++|+.+...+++.+ ++.+ .++|++||...+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL 150 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc
Confidence 358999999996543211 2234556888988887776655 3333 389999997644
No 202
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.50 E-value=1.7e-13 Score=105.48 Aligned_cols=115 Identities=19% Similarity=0.202 Sum_probs=81.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc----------------
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------------- 95 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---------------- 95 (190)
||+++||||+|+||+++++.|+++ |++|+++.|+..... .. ....++.++.+|+.+.+.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHPSL--AA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcchhh--hh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 468999999999999999999998 889999888644211 11 112367888999998531
Q ss_pred CCcCEEEEccCCCCCc--c---cccCchhHHHHHHHHHHHHHHHHH----HcC-CeEEEEecceec
Q 029640 96 IEVDQIYHLACPASPI--F---YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVY 151 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~--~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~i~vSS~~~~ 151 (190)
..+|++|||||...+. . ..+.+...+++|+.++..+.+.+. +.+ .++|++||...+
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 141 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR 141 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc
Confidence 1478999999865431 1 122345678999999777666554 333 389999996644
No 203
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2.6e-13 Score=104.41 Aligned_cols=114 Identities=17% Similarity=0.121 Sum_probs=83.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc---------CCcCEEE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIY 102 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---------~~~d~vi 102 (190)
+++++||||+|+||+++++.|+++ |++|+++.|+.+.... +.. ...++.++++|+.+.+. ..+|++|
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDE-LHT--QSANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHH-HHH--hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 368999999999999999999999 8999999986433221 111 12357888999998642 2378999
Q ss_pred EccCCCCC-cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 103 HLACPASP-IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 103 ~~ag~~~~-~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
|+||.... .. ..+..++.+++|+.++.++++.+... +.++|++||..
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~ 130 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA 130 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh
Confidence 99985432 11 11224467999999999999988753 34799998854
No 204
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.50 E-value=5.6e-13 Score=102.95 Aligned_cols=112 Identities=21% Similarity=0.160 Sum_probs=85.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++|||++|+||+.+++.|+++ |++|+++.|+. ... ....+.++++|+.+... .+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF------LTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch------hhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999 89999998865 111 13467889999998632 24
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeccee
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~ 150 (190)
+|+||||+|...... ..+.....+++|+.++.++++.+.. .+ .++|++||...
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~ 138 (252)
T PRK08220 77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA 138 (252)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh
Confidence 899999999754322 2234556799999999999888743 33 38999998653
No 205
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.50 E-value=3.4e-13 Score=105.69 Aligned_cols=113 Identities=15% Similarity=0.052 Sum_probs=83.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d 99 (190)
||+++||||+|+||+++++.|+++ |++|++++|+.... ..+. ..++.++.+|+.+.+. .++|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~----~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDV----EALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLD 74 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHH----HHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 478999999999999999999998 89999998864322 2221 1246788899998532 3689
Q ss_pred EEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEeccee
Q 029640 100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEV 150 (190)
Q Consensus 100 ~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~ 150 (190)
+|||+||...... ..+..+..+++|+.++.++++.+.. ...++|++||...
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~ 133 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSG 133 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccc
Confidence 9999999654321 1233456789999999988887743 2247999998653
No 206
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.50 E-value=7.5e-13 Score=101.69 Aligned_cols=119 Identities=21% Similarity=0.092 Sum_probs=84.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhh-h-cCCceEEEecccccccc------------CCc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-I-GHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++|||++|+||+++++.|+++ |+.|+++.|+........... . ...++.++.+|+.+... .++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLND-GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999 799999988743111111111 1 12368899999998642 259
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
|+|||++|...... ..+..+..+++|+.++.++.+.+ ++.+. ++|++||...+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~ 144 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK 144 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc
Confidence 99999998654321 22345567899999998885544 44444 899999976553
No 207
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.50 E-value=5.8e-13 Score=102.68 Aligned_cols=118 Identities=18% Similarity=0.090 Sum_probs=80.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC-CCChhhhhhhh-cCCceEEEecccccccc------------CC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++++||||+|+||+.+++.|+++ |++|.++.++. +........+. ...++.++.+|+.+... .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR-GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999 77877664432 22222222221 12468899999997632 35
Q ss_pred cCEEEEccCCCCCcc-----cccCchhHHHHHHHHHHHHHHHHHHc--------CCeEEEEeccee
Q 029640 98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEV 150 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~i~vSS~~~ 150 (190)
+|+|||+||...... ..+.....+++|+.++..+++.+.+. +.++|++||...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~ 146 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIAS 146 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhh
Confidence 999999999654311 11233456899999998887544321 126999998653
No 208
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.50 E-value=5.5e-13 Score=105.36 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=85.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC---------CCChhhhhhhhc-CCceEEEeccccccc-----
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF---------TGSKDNLRKWIG-HPRFELIRHDVTEPL----- 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~---------~~~~~~~~~~~~-~~~~~~~~~D~~~~~----- 94 (190)
+++++++||||++.||+++++.|+++ |+.|++++|+. +.......++.. ..++.++.+|+.|.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 46799999999999999999999999 88888887754 211222222221 236778889999853
Q ss_pred -------cCCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----c---C----CeEEEEeccee
Q 029640 95 -------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V---G----ARILLTSTSEV 150 (190)
Q Consensus 95 -------~~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---~----~~~i~vSS~~~ 150 (190)
+.++|++|||||...... ..+.++..+++|+.++..+.+++.. . + .++|++||...
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 160 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG 160 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence 236999999999754321 1234566799999999888876632 1 1 37999998654
No 209
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.50 E-value=2.9e-13 Score=104.65 Aligned_cols=117 Identities=22% Similarity=0.159 Sum_probs=84.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~~d 99 (190)
++++|||++|+||+++++.|+++ |++|+++.|+..........+.. ...+.++.+|+.|+.. ..+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD-GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999998 88999998864433333333222 3467889999998642 2589
Q ss_pred EEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeccee
Q 029640 100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEV 150 (190)
Q Consensus 100 ~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~i~vSS~~~ 150 (190)
+|||+||...... ..+..+..+++|+.++..+++.+. +.+ .++|++||...
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 140 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAG 140 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhh
Confidence 9999998654321 123345679999999987776664 333 38999998654
No 210
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=5.5e-13 Score=102.84 Aligned_cols=122 Identities=15% Similarity=0.084 Sum_probs=85.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++|||++|+||+.+++.|+++ |+.|++++|+..........+.. ..++.++++|+.+... .
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999 78899998865443333332221 3467889999988532 2
Q ss_pred CcCEEEEccCCCCCcc-------------cccCchhHHHHHHHHHHHHHHHHH----Hc-C-CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF-------------YKYNPVKTIKTNVIGTLNMLGLAK----RV-G-ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~----~~-~-~~~i~vSS~~~~~ 152 (190)
.+|+|||+||...... ..+.....+++|+.++..+.+.+. +. . .++|++||...|+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~ 156 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAG 156 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccC
Confidence 4899999998543211 112344578899999987766543 22 2 3689999876654
No 211
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.49 E-value=4.8e-13 Score=103.01 Aligned_cols=118 Identities=20% Similarity=0.137 Sum_probs=82.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC-CCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
++++++|||++|+||+++++.|+++ |+.|++..++ .......+..+.. ...+..+.+|+.|.+. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999 7877775432 2222222222221 2357778899998632 3
Q ss_pred CcCEEEEccCCCCCc----ccccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecce
Q 029640 97 EVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~ 149 (190)
++|+||||||..... ...+.++..+++|+.++.++++.+ .+.+. ++|++||..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 142 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVN 142 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechh
Confidence 589999999965421 122345567899999988776655 34454 899999864
No 212
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.49 E-value=4.6e-13 Score=104.13 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=81.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------------cCCcCE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQ 100 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~d~ 100 (190)
|+++||||+|.||+++++.|+++ |++|+++.|+.+........+.....+.++++|+.|.+ +.++|+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 57999999999999999999999 88999998875543333333332346788999999863 236999
Q ss_pred EEEccCCCCCc---ccc---cCchhHHHHHHHHHHHHHHHH----H-HcC-CeEEEEecceec
Q 029640 101 IYHLACPASPI---FYK---YNPVKTIKTNVIGTLNMLGLA----K-RVG-ARILLTSTSEVY 151 (190)
Q Consensus 101 vi~~ag~~~~~---~~~---~~~~~~~~~n~~~~~~l~~~~----~-~~~-~~~i~vSS~~~~ 151 (190)
||||||..... ..+ +.....+.+|+.++..+.+.+ . +.+ .++|++||...+
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~ 142 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK 142 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC
Confidence 99999964311 111 123345677877766554432 2 223 389999997653
No 213
>PRK05855 short chain dehydrogenase; Validated
Probab=99.49 E-value=6.3e-13 Score=113.97 Aligned_cols=122 Identities=16% Similarity=0.080 Sum_probs=89.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+.+........+.. ...+.++.+|++|.+. .
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 35689999999999999999999999 88999999865443332222211 2367889999998642 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcC--CeEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~i~vSS~~~~~ 152 (190)
++|+||||||...... ..+.....+++|+.++.++++++. +.+ .++|++||...|.
T Consensus 392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 5899999999754321 123345678899999998887653 333 4899999987765
No 214
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.49 E-value=3.4e-13 Score=104.58 Aligned_cols=117 Identities=19% Similarity=0.125 Sum_probs=85.1
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++||||+ +.||+++++.|++. |++|++.+|+. .....+.++. ...+.++++|+++.+.
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQND-RMKKSLQKLV-DEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCch-HHHHHHHhhc-cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 467999999999 79999999999999 89999998863 2222233332 2367889999998632
Q ss_pred CCcCEEEEccCCCCC-----cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 96 IEVDQIYHLACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
.++|++|||||...+ .. ..+..+..+++|+.++..+.+.+... +.++|++||..
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 359999999996532 11 12234557899999998888777543 24899999854
No 215
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.49 E-value=5e-13 Score=107.67 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=88.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc------------CC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~ 97 (190)
.+++++||||+|+||+++++.|+++ |++|+++.|+.+...+....+.. ...+.++.+|+.|.+. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999 88999999875544333333221 3467788899998632 35
Q ss_pred cCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecceec
Q 029640 98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~~~ 151 (190)
+|++|||||........ +..+..+++|+.++.++.+.+ .+.+ .++|++||...+
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~ 147 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGF 147 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhc
Confidence 89999999965543222 234457999999998887765 3344 389999986644
No 216
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=8.8e-13 Score=100.89 Aligned_cols=113 Identities=16% Similarity=0.106 Sum_probs=85.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc------ccCCcCEEEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYH 103 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~d~vi~ 103 (190)
+++++++|||++|+||+++++.|+++ |++|+++.|+..... ..++.++.+|+.++ ...++|+|||
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ-GAQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC-CCEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 46789999999999999999999999 889999988643321 23578889999875 1246999999
Q ss_pred ccCCCCC-----cccccCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecceec
Q 029640 104 LACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVY 151 (190)
Q Consensus 104 ~ag~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~~~ 151 (190)
+||.... ....+..+..+++|+.++.++++++.. .+ .++|++||...+
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 131 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF 131 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence 9985421 112234556799999999999887753 33 389999997654
No 217
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.48 E-value=4.4e-13 Score=102.26 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=85.8
Q ss_pred EEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc--------CCcCEEEEccCC
Q 029640 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIYHLACP 107 (190)
Q Consensus 36 lItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------~~~d~vi~~ag~ 107 (190)
+||||+|+||+++++.|+++ |+.|+++.|+.+........+....+++++.+|+.+... .++|++||++|.
T Consensus 1 lItGas~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE-GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 59999999999999999999 899999998654333222222223468889999998742 358999999986
Q ss_pred CCCcc----cccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecC
Q 029640 108 ASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 108 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~ 152 (190)
..... ..+.....+++|+.++.++.++....+. ++|++||...+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~ 129 (230)
T PRK07041 80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR 129 (230)
T ss_pred CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC
Confidence 54321 1234566799999999999996655444 899999977664
No 218
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.48 E-value=6.6e-13 Score=102.12 Aligned_cols=119 Identities=17% Similarity=0.097 Sum_probs=81.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEE-cCCCCCChhhhhhhhc-CCceEEEecccccccc------------CC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~ 97 (190)
|++++||||+|+||+++++.|+++ |+.|+++ .|+..........+.. ...+..+.+|+.|.+. .+
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE-GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999999 7888764 4543322222222221 2357889999998642 35
Q ss_pred cCEEEEccCCCCCcc-----cccCchhHHHHHHHHHHHHHHHHHHc--------CCeEEEEecceec
Q 029640 98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~i~vSS~~~~ 151 (190)
+|+|||++|...... ..+.....+++|+.++.++++.+... +.++|++||...+
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~ 146 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR 146 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc
Confidence 899999999653211 11224467899999998877665332 2369999997643
No 219
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.48 E-value=9.4e-13 Score=102.47 Aligned_cols=119 Identities=15% Similarity=0.113 Sum_probs=81.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhhc--CCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG--HPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~------------ 94 (190)
+++++++||||+++||+++++.|++. |++|+++.|+.... ......+.. ..++.++.+|++|.+
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS-GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999 88888876543222 221222211 246789999999863
Q ss_pred cCCcCEEEEccCCCCC-------ccc---ccCchhHHHHHHHHHHHHHHHHH----HcCC-eEEEEecce
Q 029640 95 LIEVDQIYHLACPASP-------IFY---KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~-------~~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~i~vSS~~ 149 (190)
+.++|++|||||.... ... .+.....+++|+.+...+.+.+. +.+. ++|++||..
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 154 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTG 154 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccc
Confidence 2358999999985421 111 12234568888888776665553 3333 899999954
No 220
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.48 E-value=1.5e-12 Score=100.96 Aligned_cols=119 Identities=14% Similarity=0.117 Sum_probs=94.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
..|+.|+||||++.||+.++.+++++ +..+.+.+.+.....+.........++..+.||+++.+. ..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r-g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR-GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh-CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999 888888888887777666666544579999999998642 35
Q ss_pred cCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHH----Hc-CCeEEEEecce
Q 029640 98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RV-GARILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~i~vSS~~ 149 (190)
+|++|||||++....- ++.-+..+++|+.+...+.++.. +. +.++|.++|..
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~a 175 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVA 175 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhh
Confidence 9999999998775322 22334579999999998877763 32 34899999865
No 221
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.6e-12 Score=102.19 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=83.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc-----------CCcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----------IEVD 99 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~-----------~~~d 99 (190)
++.++|||+ |+||+++++.|. + |++|++++|+.+........+.. ..++.++++|+.|.+. .++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-A-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 478899997 799999999995 6 89999999865433332222221 2367889999998632 3599
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVY 151 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~ 151 (190)
+||||||.... ...+...+++|+.++.++++.+... +.++|++||....
T Consensus 79 ~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~ 130 (275)
T PRK06940 79 GLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGH 130 (275)
T ss_pred EEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccc
Confidence 99999996532 3457788999999999999888543 2367777876543
No 222
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.47 E-value=1.4e-12 Score=101.47 Aligned_cols=118 Identities=18% Similarity=0.053 Sum_probs=83.7
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------ 94 (190)
+++++++||||+ +.||+++++.|+++ |++|.+.+|+.+.. ..+..+.. .....++++|+.+.+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 85 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKAR-PYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE 85 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhH-HHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence 467999999998 59999999999999 88998888864321 12222211 123467889999863
Q ss_pred cCCcCEEEEccCCCCCc--------ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 LIEVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||..... ...+.++..+++|+.++.++.+.+... +.++|++||..
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 23599999999864321 112345668999999999998877432 24799999854
No 223
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.46 E-value=1.8e-13 Score=105.26 Aligned_cols=115 Identities=19% Similarity=0.208 Sum_probs=99.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC-----CcCEEEEc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHL 104 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-----~~d~vi~~ 104 (190)
..|-.+.|+|||||+|+.+++.|.+. |.+|++..|.++...-+++-..+...+-+...|+.|++.. ..++|||.
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~-GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL 137 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKM-GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL 137 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhc-CCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence 36778999999999999999999999 8999999999888887777666778899999999998754 48999999
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecce
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~ 149 (190)
.|-- .+.....+.++|..++.+|++.|++.|+ |+|++|+..
T Consensus 138 IGrd----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg 179 (391)
T KOG2865|consen 138 IGRD----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG 179 (391)
T ss_pred eccc----cccCCcccccccchHHHHHHHHHHhhChhheeehhhcc
Confidence 9732 2344556779999999999999999998 999999866
No 224
>PRK06484 short chain dehydrogenase; Validated
Probab=99.46 E-value=7.3e-13 Score=112.65 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=88.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
..+++++||||+|+||+++++.|+++ |++|++++|+..........+ ..++..+.+|+.|++. ..
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 37899999999999999999999999 889999988654333222222 2356778999998642 35
Q ss_pred cCEEEEccCCCCC--cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecceec
Q 029640 98 VDQIYHLACPASP--IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~--~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~ 151 (190)
+|+||||||.... .. ..+.++..+++|+.++.++++.+... +.++|++||...+
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 405 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL 405 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence 9999999996532 11 12345567999999999998887653 2489999997644
No 225
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.46 E-value=2.7e-12 Score=99.95 Aligned_cols=121 Identities=21% Similarity=0.183 Sum_probs=86.1
Q ss_pred cccCCCEEEEEcccc-hHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEeccccccc---------
Q 029640 28 FFQSNMRILVTGGAG-FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL--------- 94 (190)
Q Consensus 28 ~~~~~~~vlItG~~G-~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~--------- 94 (190)
.++.+++++||||+| .||+++++.|+++ |+.|++++|+..........+. ...++.++++|+.+..
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 345789999999997 7999999999999 8889998886544333333221 2246888999999863
Q ss_pred ---cCCcCEEEEccCCCCCccc----ccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecce
Q 029640 95 ---LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSE 149 (190)
Q Consensus 95 ---~~~~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~ 149 (190)
+.++|+||||||....... .+.....+++|+.++..+++.+.. .+ .++|++||..
T Consensus 92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~ 159 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVL 159 (262)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchh
Confidence 1358999999996443211 123445688999999888777643 32 3788888854
No 226
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.46 E-value=8e-13 Score=115.31 Aligned_cols=122 Identities=16% Similarity=0.069 Sum_probs=89.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------C
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
+.+++++||||+|+||+++++.|+++ |++|+++.|+.+........+. ...++.++.+|+.|.+. .
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999 8899999987554333332222 13468889999998642 2
Q ss_pred CcCEEEEccCCCCCccc------ccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecceecC
Q 029640 97 EVDQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG 152 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~~~~ 152 (190)
++|+||||||....... .+.....+++|+.++.++++.+ ++.+. ++|++||...+.
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 514 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT 514 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 59999999996432111 1235567999999998887665 33444 899999987665
No 227
>PRK08017 oxidoreductase; Provisional
Probab=99.45 E-value=1.6e-12 Score=100.55 Aligned_cols=111 Identities=20% Similarity=0.129 Sum_probs=80.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------------CCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------------~~~d 99 (190)
++++|||++|+||+++++.|+++ |++|+++.|+.+.... +. ..+++.+.+|+.+... ..+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVAR----MN-SLGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHH----HH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 68999999999999999999999 7899999886543221 11 1246788899987531 3478
Q ss_pred EEEEccCCCCCcc----cccCchhHHHHHHHHHHHH----HHHHHHcCC-eEEEEecce
Q 029640 100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSE 149 (190)
Q Consensus 100 ~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~-~~i~vSS~~ 149 (190)
.+||++|...... ..+..+..+++|+.++.++ ++.+++.+. ++|++||..
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~ 135 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVM 135 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcc
Confidence 9999998644221 1223446789999988776 455555664 899999864
No 228
>PRK07069 short chain dehydrogenase; Validated
Probab=99.45 E-value=1.3e-12 Score=100.74 Aligned_cols=119 Identities=18% Similarity=0.121 Sum_probs=81.9
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhh-hhhc---CCceEEEecccccccc------------CC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR-KWIG---HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++||||+|+||+++++.|+++ |++|++++|+.......+. .+.. ...+..+.+|+.+.+. .+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ-GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 3899999999999999999999 8999999886322222221 2211 1234567889998642 35
Q ss_pred cCEEEEccCCCCCccc----ccCchhHHHHHHH----HHHHHHHHHHHcCC-eEEEEecceecCC
Q 029640 98 VDQIYHLACPASPIFY----KYNPVKTIKTNVI----GTLNMLGLAKRVGA-RILLTSTSEVYGD 153 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~----~~~~~~~~~~n~~----~~~~l~~~~~~~~~-~~i~vSS~~~~~~ 153 (190)
+|+|||+||....... .+.....+++|+. .+..+++.+++.+. ++|++||...+..
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~ 144 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA 144 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC
Confidence 8999999986553211 1223456788888 55666677766654 8999999776553
No 229
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.45 E-value=8.5e-13 Score=102.45 Aligned_cols=122 Identities=12% Similarity=0.079 Sum_probs=87.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCe-EEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------ 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~-v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------ 95 (190)
+++++++|||++|+||+.+++.|+++ |+. |+++.|+.+........+. ....+.++.+|+.++..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 47799999999999999999999999 666 9999886543332222221 12357788899998642
Q ss_pred CCcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecceecC
Q 029640 96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYG 152 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~~~~ 152 (190)
.++|+|||++|...... ..+..+..+++|+.++.++++.+.+ .+ .++|++||...++
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~ 149 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG 149 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc
Confidence 25899999998654221 1223345689999999999877743 22 3799999977665
No 230
>PRK05865 hypothetical protein; Provisional
Probab=99.45 E-value=6.6e-13 Score=117.34 Aligned_cols=98 Identities=29% Similarity=0.420 Sum_probs=80.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~ 107 (190)
|+|+||||+||||+++++.|+++ |++|++++|+.... . ...+.++.+|+.|.. +.++|+|||+|+.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~-G~~Vv~l~R~~~~~---~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~ 71 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ-GHEVVGIARHRPDS---W-----PSSADFIAADIRDATAVESAMTGADVVAHCAWV 71 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCchhh---c-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCc
Confidence 57999999999999999999999 89999998863221 1 125788899999863 3469999999975
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecc
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~ 148 (190)
..+ .+++|+.++.+++++|++.++ ++|++||.
T Consensus 72 ~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 72 RGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred ccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 321 468999999999999999887 89999995
No 231
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.44 E-value=1.3e-12 Score=102.48 Aligned_cols=118 Identities=14% Similarity=0.070 Sum_probs=83.6
Q ss_pred cCCCEEEEEcccc--hHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G--~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~----------- 95 (190)
+++++++||||++ .||+++++.|+++ |++|++.+|+... ...+..+.. ......+++|+.|.+.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK 82 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4679999999997 9999999999999 8999998876422 222222211 1223568899998642
Q ss_pred -CCcCEEEEccCCCCC-----cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 96 -IEVDQIYHLACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
.++|++|||||.... .. ..+.++..+++|+.++.++.+++... +.++|++||..
T Consensus 83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 369999999996532 11 12345567899999999888776432 24899999864
No 232
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.5e-12 Score=99.12 Aligned_cols=112 Identities=19% Similarity=0.212 Sum_probs=81.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc----------CCcCEE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----------IEVDQI 101 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----------~~~d~v 101 (190)
+++++|||++|+||+++++.|+++ |++|++++|+...... +.. ..++.++.+|+.|.+. .++|+|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~v 75 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTA-LQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLL 75 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHH-HHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence 378999999999999999999999 8999999997655332 222 2356778899988632 259999
Q ss_pred EEccCCCCCcc------cccCchhHHHHHHHHHHHHHHHHHHc---C-CeEEEEecc
Q 029640 102 YHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV---G-ARILLTSTS 148 (190)
Q Consensus 102 i~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~~~i~vSS~ 148 (190)
||+||...+.. ..+.....+.+|+.++..+++.+... + .+++++||.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~ 132 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ 132 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC
Confidence 99998754311 11234456788999999888877543 2 368888774
No 233
>PRK08324 short chain dehydrogenase; Validated
Probab=99.44 E-value=1.4e-12 Score=114.23 Aligned_cols=121 Identities=21% Similarity=0.132 Sum_probs=89.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++||||+|+||+++++.|+++ |.+|++++|+..........+.....+.++.+|+++... .+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAE-GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG 498 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 36799999999999999999999999 789999998765433333323222468889999998642 26
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH----HcC--CeEEEEecceec
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~i~vSS~~~~ 151 (190)
+|+||||||...... ..+.+...+++|+.++..+++.+. +.+ .++|++||...+
T Consensus 499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~ 562 (681)
T PRK08324 499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV 562 (681)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Confidence 999999999654322 122345678999999999977664 333 489999997644
No 234
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.43 E-value=2.4e-12 Score=112.60 Aligned_cols=120 Identities=20% Similarity=0.212 Sum_probs=85.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~----------- 95 (190)
+.+++++||||+|+||+++++.|+++ |++|++++|+..........+. ....+..+++|+++...
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 36799999999999999999999999 8999999886544332222222 22357788999998642
Q ss_pred -CCcCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHH----HHcC--CeEEEEeccee
Q 029640 96 -IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSEV 150 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~i~vSS~~~ 150 (190)
.++|+||||||........ +.....+++|+.+...+.+.+ ++.+ .++|++||...
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a 556 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA 556 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh
Confidence 2699999999965432211 224456888988887766444 3333 48999999653
No 235
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.43 E-value=1.8e-12 Score=98.51 Aligned_cols=112 Identities=19% Similarity=0.203 Sum_probs=82.9
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc----------CCcCEE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----------IEVDQI 101 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----------~~~d~v 101 (190)
|++++|||++|+||+++++.|+++ |++|+++.|+.+... .+.. ..+.++.+|+.+... .++|+|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~----~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~v 74 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALA----ALQA-LGAEALALDVADPASVAGLAWKLDGEALDAA 74 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHH----HHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEE
Confidence 478999999999999999999998 889999988644322 2211 245688999998632 248999
Q ss_pred EEccCCCCCcc------cccCchhHHHHHHHHHHHHHHHHHHc----CCeEEEEecce
Q 029640 102 YHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSE 149 (190)
Q Consensus 102 i~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~i~vSS~~ 149 (190)
||++|...... ..+..+..+++|+.++.++++++.+. +.+++++||..
T Consensus 75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~ 132 (222)
T PRK06953 75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM 132 (222)
T ss_pred EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc
Confidence 99998753211 22345668999999999999888642 23788998864
No 236
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=3.3e-12 Score=100.24 Aligned_cols=118 Identities=17% Similarity=0.068 Sum_probs=84.0
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~------------ 94 (190)
+.+++++||||+ +.||+++++.|+++ |++|+++.|+.. ..+.+..+... .....+++|+.+.+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 467999999997 89999999999999 889988877522 22223322211 23556889999863
Q ss_pred cCCcCEEEEccCCCCC-----c---ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 LIEVDQIYHLACPASP-----I---FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~-----~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||.... . ...+.++..+++|+.++..+++.+... +.++|++||..
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 2359999999996532 1 112345567999999999998887543 24899999854
No 237
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.43 E-value=2.1e-12 Score=100.31 Aligned_cols=119 Identities=15% Similarity=0.096 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEeccccccc--------cCCcC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL--------LIEVD 99 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--------~~~~d 99 (190)
+++++++|||++|.||+++++.|+++ |++|++++|+.+........+.. ..++.++.+|+.+++ ..++|
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 36799999999999999999999998 88999999875543332222221 236788899999864 24699
Q ss_pred EEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecce
Q 029640 100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSE 149 (190)
Q Consensus 100 ~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~ 149 (190)
++|||+|...... ..+.....+++|+.+...+++.+ .+.+ .++|++||..
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 142 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAA 142 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcc
Confidence 9999998653221 12234567899999998888776 3333 3799998853
No 238
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.43 E-value=3.4e-12 Score=97.82 Aligned_cols=116 Identities=21% Similarity=0.129 Sum_probs=80.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC-Chhhhhhhh-cCCceEEEecccccccc------------CCc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWI-GHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
++++|||++|+||+++++.|+++ |+.|+++.|+... ......... ...++.++.+|+.++.. ..+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD-GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999 8888888773221 111111111 12468899999998642 358
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHH----HHcCC-eEEEEecce
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~i~vSS~~ 149 (190)
|+|||+||...... ..+.++..+++|+.++..+++.+ ++.+. ++|++||..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 139 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVN 139 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence 99999998654321 12234566889999987765544 45554 899999854
No 239
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.43 E-value=1.8e-12 Score=99.12 Aligned_cols=117 Identities=21% Similarity=0.161 Sum_probs=84.1
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh-hhhhhhhc-CCceEEEecccccccc------------CCcCE
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIG-HPRFELIRHDVTEPLL------------IEVDQ 100 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~------------~~~d~ 100 (190)
++|||++|+||+++++.|+++ |++|+++.|+..... .....+.. ...+.++.+|+.|... ..+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE-GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999 889999988652221 22222211 2357889999998642 24899
Q ss_pred EEEccCCCCCc----ccccCchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecce-ecC
Q 029640 101 IYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSE-VYG 152 (190)
Q Consensus 101 vi~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~-~~~ 152 (190)
|||++|..... ...+.++..+++|+.++.++++.+.. .+. ++|++||.. .++
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g 141 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG 141 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC
Confidence 99999975432 12234567889999999999988864 233 899999965 444
No 240
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.43 E-value=2.7e-12 Score=98.29 Aligned_cols=118 Identities=12% Similarity=0.052 Sum_probs=84.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------------cCCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~ 98 (190)
.+++++|||++|+||+++++.|+++ |++|+++.|+.+..+.....+.....+.++.+|+.+.. ..++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999 88999999975433322222222346788999999863 2347
Q ss_pred CEEEEccCCCCCc--ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 99 DQIYHLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
|.+||++|..... ...+..+..++.|+.+...+++.+.+. +.++|++||..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999999854321 111234456889999988887776543 34799999854
No 241
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=4e-12 Score=98.85 Aligned_cols=116 Identities=18% Similarity=0.150 Sum_probs=81.3
Q ss_pred cCCCEEEEEcc--cchHHHHHHHHHHhcCCCeEEEEcCCCC-CChhhhhhhhcCCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~--~G~iG~~l~~~L~~~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~------------ 94 (190)
+.+++++|||+ ++.||+++++.|+++ |+.|++.+|+.. ...+.+.... ...+.++++|+.|.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 82 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGRALRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVREH 82 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCccchhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence 36789999999 899999999999999 889999887532 1112222111 125678899999864
Q ss_pred cCCcCEEEEccCCCCC-----cccc---cCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEec
Q 029640 95 LIEVDQIYHLACPASP-----IFYK---YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTST 147 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~-----~~~~---~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS 147 (190)
+.++|++|||||.... ...+ +.....+++|+.++.++.+.+... +.++|++|+
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~ 146 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF 146 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence 2359999999997532 1112 223446899999999888777532 237888875
No 242
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.42 E-value=3.2e-12 Score=100.46 Aligned_cols=117 Identities=18% Similarity=0.097 Sum_probs=83.3
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEeccccccc-----------
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL----------- 94 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~----------- 94 (190)
+.+|+++||||+ +.||+++++.|+++ |+.|++.+|+.+ ..+.+..+.. ... ..+++|+.|.+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 467999999997 79999999999999 889998888642 1222222211 112 57889999864
Q ss_pred -cCCcCEEEEccCCCCC-----c---ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 -LIEVDQIYHLACPASP-----I---FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 -~~~~d~vi~~ag~~~~-----~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||.... . ...+..+..+++|+.++..+.+.+... +.++|++||..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 2359999999996431 1 112335567999999999988877542 24899999854
No 243
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.5e-12 Score=96.67 Aligned_cols=112 Identities=16% Similarity=0.228 Sum_probs=81.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc---------CCcCEEEE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYH 103 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---------~~~d~vi~ 103 (190)
|+++||||+|+||+++++.|+++ |++|+++.|+.+....... ..++.++++|+.+... .++|++||
T Consensus 1 m~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAK----ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 47999999999999999999998 8899999886433222111 2246788899998642 25899999
Q ss_pred ccCCCCC----c---c--cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 104 LACPASP----I---F--YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 104 ~ag~~~~----~---~--~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
|||.... . . ..+.....+++|+.++.++++++... +.++|++||..
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 133 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN 133 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence 9984211 0 1 12345567999999999999887542 24899999843
No 244
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1.5e-12 Score=100.59 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=78.9
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC--------------C
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------------E 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--------------~ 97 (190)
|++++||||+|+||+++++.|+++ |++|+++.|+..+....+... ...++.++.+|+.+.... +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK-GTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc-CCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 378999999999999999999999 889999988652221111111 124688899999986321 1
Q ss_pred c--CEEEEccCCCCCcc-----cccCchhHHHHHHHHHHHHHHHH----HHcC--CeEEEEeccee
Q 029640 98 V--DQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSEV 150 (190)
Q Consensus 98 ~--d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~i~vSS~~~ 150 (190)
. .++||+||...+.. ..+.....+++|+.++..+++.+ ++.+ .++|++||...
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA 144 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh
Confidence 1 27899998654311 12334456888988877666555 3322 37999999653
No 245
>PLN00015 protochlorophyllide reductase
Probab=99.42 E-value=1.7e-12 Score=103.54 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=82.7
Q ss_pred EEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhh-cCCceEEEecccccccc------------CCcCEE
Q 029640 36 LVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IEVDQI 101 (190)
Q Consensus 36 lItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~------------~~~d~v 101 (190)
+||||++.||.++++.|+++ | +.|++..|+.+........+. ....+.++.+|+.+.+. .++|+|
T Consensus 1 lITGas~GIG~aia~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAET-GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 59999999999999999999 7 899998886543333332221 12367888999998642 358999
Q ss_pred EEccCCCCCc--c---cccCchhHHHHHHHHHHHHHHHH----HHcC---CeEEEEecceec
Q 029640 102 YHLACPASPI--F---YKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVY 151 (190)
Q Consensus 102 i~~ag~~~~~--~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~~~i~vSS~~~~ 151 (190)
|||||...+. . ..+..+..+++|+.++..+++.+ .+.+ .+||++||...+
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 9999975321 1 22345568999999988886655 3333 489999997654
No 246
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.42 E-value=2.4e-12 Score=100.39 Aligned_cols=119 Identities=16% Similarity=0.051 Sum_probs=81.4
Q ss_pred cCCCEEEEEcc--cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEecccccccc-----------
Q 029640 30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLL----------- 95 (190)
Q Consensus 30 ~~~~~vlItG~--~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~----------- 95 (190)
+++++++|||| ++.||+++++.|+++ |.+|++.+|.. ...+...++... .....+++|+.|.+.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999996 679999999999999 88998887753 222333333211 234578899998642
Q ss_pred -CCcCEEEEccCCCCCc-----c-c---ccCchhHHHHHHHHHHHHHHHHHH----cCCeEEEEeccee
Q 029640 96 -IEVDQIYHLACPASPI-----F-Y---KYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEV 150 (190)
Q Consensus 96 -~~~d~vi~~ag~~~~~-----~-~---~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~i~vSS~~~ 150 (190)
.++|++|||||..... . . .+.....+++|+.++..+.+.+.. .+.++|++||...
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~ 150 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGA 150 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccc
Confidence 3599999999975421 0 1 112334578899888887776532 2247999998553
No 247
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.42 E-value=1e-12 Score=96.64 Aligned_cols=120 Identities=21% Similarity=0.217 Sum_probs=90.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
++|.+|+||||+..||..+++.+.+. |.+|++..|+.+...+... ..+.+....||+.|... ..
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~---~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKA---ENPEIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHh---cCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence 46889999999999999999999999 8999999997665554433 25688889999998752 35
Q ss_pred cCEEEEccCCCCCccc---cc---CchhHHHHHHHHHHHHHHHHH----HcC-CeEEEEecceecCC
Q 029640 98 VDQIYHLACPASPIFY---KY---NPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGD 153 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~---~~---~~~~~~~~n~~~~~~l~~~~~----~~~-~~~i~vSS~~~~~~ 153 (190)
.+++|||||....... ++ ..++-+.+|+.++..+..+.- +.+ .-+|.|||.-.|-+
T Consensus 79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP 145 (245)
T COG3967 79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP 145 (245)
T ss_pred hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence 9999999997764221 11 123457889999887766553 333 37999999665543
No 248
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.42 E-value=5.9e-12 Score=98.36 Aligned_cols=118 Identities=18% Similarity=0.084 Sum_probs=82.7
Q ss_pred cCCCEEEEEcccc--hHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~G--~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------ 94 (190)
+++++++||||++ .||+++++.|+++ |+.|++.+|+. ...+....+.. ......+.+|+.|.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence 4679999999985 9999999999999 88898888762 22233333322 234567889999863
Q ss_pred cCCcCEEEEccCCCCCcc---------cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 LIEVDQIYHLACPASPIF---------YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||...... ..+.++..+++|+.++..+.+.+... +.++|++||..
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~ 148 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLG 148 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCC
Confidence 235999999999643211 11234456899999988888776432 23799999854
No 249
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.4e-12 Score=99.30 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=82.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEecccccccc------------CCc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~------------~~~ 98 (190)
|+++||||+|+||+++++.|+++ |+.|++++|+.+........+.. ...+.++.+|+.+.+. .++
T Consensus 1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 47999999999999999999998 78899988865433322222221 2234567899988532 358
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----c--CCeEEEEeccee
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V--GARILLTSTSEV 150 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~i~vSS~~~ 150 (190)
|+|||++|...... ..+..+..+++|+.++.++++++.. . +.++|++||...
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~ 141 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG 141 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc
Confidence 99999998653221 1233456799999999999988642 2 248999999653
No 250
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.41 E-value=9.7e-12 Score=96.79 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=83.5
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhh---hcCCceEEEeccccccc----------
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL---------- 94 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~---------- 94 (190)
+.+++++||||+ +.||+++++.|+++ |++|++..|+... .+.+..+ ....++.++++|+.|++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 467999999997 89999999999999 8899888775322 2222222 12346788999999864
Q ss_pred --cCCcCEEEEccCCCCC-----cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 --LIEVDQIYHLACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 --~~~~d~vi~~ag~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||.... .. ..+.+...+++|+.++..+.+.+... +.++|++||..
T Consensus 83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 2359999999986431 11 11223456789999988887776542 24899999854
No 251
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.41 E-value=5.3e-12 Score=98.37 Aligned_cols=118 Identities=15% Similarity=0.058 Sum_probs=82.5
Q ss_pred cCCCEEEEEcccc--hHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEeccccccc------------
Q 029640 30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~~G--~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~------------ 94 (190)
+++++++||||++ .||+++++.|+++ |+.|++.+|+. ...+.+..+... ....++++|+.|++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 3678999999997 8999999999999 88898887753 222223333221 22345789999863
Q ss_pred cCCcCEEEEccCCCCC-----cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 LIEVDQIYHLACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||.... .. ..+.+...+++|+.++..+++.+... +.++|++||..
T Consensus 84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~ 149 (260)
T PRK06603 84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYG 149 (260)
T ss_pred cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCc
Confidence 2359999999986431 11 12335567999999999988876432 24899999855
No 252
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.41 E-value=5.2e-12 Score=96.84 Aligned_cols=115 Identities=17% Similarity=0.114 Sum_probs=81.8
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhhc-CCceEEEecccccccc------------CCcCE
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-HPRFELIRHDVTEPLL------------IEVDQ 100 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~~d~ 100 (190)
++||||+|+||.++++.|+++ |++|.++.|+.... ......+.. ..++.++.+|+.+... ..+|+
T Consensus 1 vlItGas~giG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD-GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999 88888887653322 222222221 2468899999998642 25899
Q ss_pred EEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHH-----HcC-CeEEEEeccee
Q 029640 101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVG-ARILLTSTSEV 150 (190)
Q Consensus 101 vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~-~~~i~vSS~~~ 150 (190)
+||++|...... ..+.+...+++|+.++.++++.+. +.+ .++|++||...
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~ 139 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSG 139 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhh
Confidence 999998654321 233456689999999999988652 233 38999999653
No 253
>PRK06484 short chain dehydrogenase; Validated
Probab=99.40 E-value=3e-12 Score=108.95 Aligned_cols=118 Identities=20% Similarity=0.244 Sum_probs=87.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
.+++++|||++++||+++++.|+++ |++|+++.|+.+........+ ...+.++.+|+.+++. .++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSL--GPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh--CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 6789999999999999999999999 899999988655443333322 2356788999998642 359
Q ss_pred CEEEEccCCCCC------cccccCchhHHHHHHHHHHHHHHHHHHc----C--CeEEEEecceec
Q 029640 99 DQIYHLACPASP------IFYKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVY 151 (190)
Q Consensus 99 d~vi~~ag~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~i~vSS~~~~ 151 (190)
|+||||||...+ ....+..+..+++|+.++..+++++... + .++|++||....
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~ 145 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL 145 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC
Confidence 999999986322 1122345668999999999988877532 2 389999996643
No 254
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.40 E-value=6.2e-12 Score=98.23 Aligned_cols=103 Identities=15% Similarity=0.082 Sum_probs=71.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC-CChhhhhhhhc--CCceEEEecccccccc--------------
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIG--HPRFELIRHDVTEPLL-------------- 95 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~-------------- 95 (190)
..++||||+|+||+++++.|+++ |++|+++.|+.. ........+.. ...+..+.+|++|.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE-GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 46899999999999999999999 888888765432 22222222211 2356678899998641
Q ss_pred --CCcCEEEEccCCCCCccc-cc--------------CchhHHHHHHHHHHHHHHHHH
Q 029640 96 --IEVDQIYHLACPASPIFY-KY--------------NPVKTIKTNVIGTLNMLGLAK 136 (190)
Q Consensus 96 --~~~d~vi~~ag~~~~~~~-~~--------------~~~~~~~~n~~~~~~l~~~~~ 136 (190)
.++|+||||||...+... +. .....+++|+.++..+.+.+.
T Consensus 81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 138 (267)
T TIGR02685 81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFA 138 (267)
T ss_pred ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 359999999996543211 11 133568999999999988764
No 255
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.40 E-value=6.5e-12 Score=103.41 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=76.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL 104 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ 104 (190)
+++++++||||+|+||+++++.|+++ |++|+++.|+.+........ ....+..+.+|+.|.+ +.++|++|||
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 36799999999999999999999999 88999988865432221111 1124667889999864 3579999999
Q ss_pred cCCCCC-cccccCchhHHHHHHHHHHHHHHHHH
Q 029640 105 ACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAK 136 (190)
Q Consensus 105 ag~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~ 136 (190)
||.... ..+.+..++.+++|+.++.++++++.
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 986432 12233456789999999999988874
No 256
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.39 E-value=6.8e-12 Score=97.66 Aligned_cols=119 Identities=16% Similarity=0.095 Sum_probs=83.9
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCC--ChhhhhhhhcC-CceEEEecccccccc---------
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIGH-PRFELIRHDVTEPLL--------- 95 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~D~~~~~~--------- 95 (190)
+.+++++||||+ +.||+++++.|+++ |++|++..|+.+. ..+.+..+... ..+.++++|+.|++.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 367899999986 89999999999999 8888887664332 22223333211 246678899998642
Q ss_pred ---CCcCEEEEccCCCCC-----cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 96 ---IEVDQIYHLACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 96 ---~~~d~vi~~ag~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
.++|++|||||.... .. ..+.++..+++|+.++..+.+.+... +.++|++||..
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 359999999996531 11 12334567899999999888876432 24899999854
No 257
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.38 E-value=1.5e-11 Score=98.11 Aligned_cols=119 Identities=11% Similarity=0.011 Sum_probs=82.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC----------hhhhhhhhc-CCceEEEeccccccc----
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS----------KDNLRKWIG-HPRFELIRHDVTEPL---- 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~----------~~~~~~~~~-~~~~~~~~~D~~~~~---- 94 (190)
+.+++++||||++.||+++++.|++. |+.|++++|+.... ......+.. ..++.++++|+.+++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 46799999999999999999999999 88999998874211 111111111 235778899999863
Q ss_pred --------cCCcCEEEEcc-CCCC-----Ccccc---cCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEecce
Q 029640 95 --------LIEVDQIYHLA-CPAS-----PIFYK---YNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSE 149 (190)
Q Consensus 95 --------~~~~d~vi~~a-g~~~-----~~~~~---~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS~~ 149 (190)
+.++|++|||| |... ....+ +...+.+++|+.+...+.+++.. .+ .+||++||..
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~ 161 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT 161 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence 23599999999 7421 11111 22445688999998888776643 33 4899999854
No 258
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.37 E-value=1.2e-11 Score=103.55 Aligned_cols=119 Identities=19% Similarity=0.139 Sum_probs=86.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~ 97 (190)
+.+++++|||++|+||..+++.|+++ |.+|+++++... .+.+..+....+...+.+|+.+... .+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAA--GEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCcc--HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999 889998877422 2222222222234678899998632 25
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHcC-----CeEEEEecceec
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG-----ARILLTSTSEVY 151 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~i~vSS~~~~ 151 (190)
+|+|||+||...... ..+..+..+++|+.++.++.+.+.... .++|++||...+
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~ 347 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI 347 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc
Confidence 899999999664321 223355678999999999999886532 389999997643
No 259
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.36 E-value=1e-11 Score=96.86 Aligned_cols=118 Identities=16% Similarity=0.030 Sum_probs=82.0
Q ss_pred cCCCEEEEEcc--cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEeccccccc------------
Q 029640 30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------ 94 (190)
Q Consensus 30 ~~~~~vlItG~--~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~------------ 94 (190)
+.+++++|||| ++.||+++++.|+++ |++|++.+|... ..+.+..+... .....+.+|+.|++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYVGDR-FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEccchH-HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence 36799999996 689999999999999 889988765422 12223222211 22346789999864
Q ss_pred cCCcCEEEEccCCCCCc---------ccccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 95 LIEVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 95 ~~~~d~vi~~ag~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
+.++|++|||||..... ...+.++..+++|+.++..+.+++.+. +.++|++||..
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~ 148 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG 148 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 23599999999965321 112234457899999999888877543 23899999855
No 260
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.36 E-value=2.4e-11 Score=94.38 Aligned_cols=119 Identities=17% Similarity=0.113 Sum_probs=80.5
Q ss_pred cCCCEEEEEcccc--hHHHHHHHHHHhcCCCeEEEEcCCCC--C-----Chh---hh-hhhh-cCCceEEEecccccccc
Q 029640 30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFT--G-----SKD---NL-RKWI-GHPRFELIRHDVTEPLL 95 (190)
Q Consensus 30 ~~~~~vlItG~~G--~iG~~l~~~L~~~~~~~v~~~~r~~~--~-----~~~---~~-~~~~-~~~~~~~~~~D~~~~~~ 95 (190)
+++++++||||+| .||+++++.|+++ |..|+++.|... . ... .+ ..+. ....+..+++|+.+.+.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~-G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEA-GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHC-CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4789999999995 8999999999999 788888653210 0 011 11 1111 12467888999998642
Q ss_pred ------------CCcCEEEEccCCCCCc-c---cccCchhHHHHHHHHHHHHHHHH----HHcC-CeEEEEecce
Q 029640 96 ------------IEVDQIYHLACPASPI-F---YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSE 149 (190)
Q Consensus 96 ------------~~~d~vi~~ag~~~~~-~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~i~vSS~~ 149 (190)
..+|+|||+||..... . ..+..+..+++|+.++..+.+.+ ++.+ .++|++||..
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 157 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQ 157 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence 2489999999865322 1 12234557999999988885444 3333 3899999964
No 261
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.35 E-value=1.5e-11 Score=89.29 Aligned_cols=118 Identities=16% Similarity=0.133 Sum_probs=84.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhh---hhhh-cCCceEEEecccccccc------------C
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWI-GHPRFELIRHDVTEPLL------------I 96 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~D~~~~~~------------~ 96 (190)
++++|+||+|+||.++++.|++++.+.|.++.|+........ ..+. ...++.++.+|+.++.. .
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999983357888877654433211 1221 12467788899987531 2
Q ss_pred CcCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEeccee
Q 029640 97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~ 150 (190)
.+|+|||++|...... ..+..+..+++|+.++.++++++++.+. ++|++||...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~ 139 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAG 139 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHH
Confidence 4799999998654221 1234556799999999999999977665 7898888653
No 262
>PRK05599 hypothetical protein; Provisional
Probab=99.35 E-value=1.6e-11 Score=94.97 Aligned_cols=116 Identities=14% Similarity=0.104 Sum_probs=80.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc--CCceEEEecccccccc------------CCc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~------------~~~ 98 (190)
|+++||||++.||+++++.|. + |++|+++.|+.+.......++.. ...+.++.+|+.|.+. .++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999998 5 78999998876544443333322 2247889999998632 359
Q ss_pred CEEEEccCCCCCcc-c---ccCchhHHHHHHHHHHHHHHH----HHHcC--CeEEEEeccee
Q 029640 99 DQIYHLACPASPIF-Y---KYNPVKTIKTNVIGTLNMLGL----AKRVG--ARILLTSTSEV 150 (190)
Q Consensus 99 d~vi~~ag~~~~~~-~---~~~~~~~~~~n~~~~~~l~~~----~~~~~--~~~i~vSS~~~ 150 (190)
|++|||||...... . .....+.+.+|+.+...+++. +.+.+ .++|++||...
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~ 140 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG 140 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 99999999754321 1 112334567788877655544 33432 48999999654
No 263
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.34 E-value=1.6e-11 Score=101.42 Aligned_cols=119 Identities=28% Similarity=0.334 Sum_probs=90.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcC--CCeEEEEcCCCCCCh--hhhhhh---------hcC-----CceEEEecccc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSK--DNLRKW---------IGH-----PRFELIRHDVT 91 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~--~~~v~~~~r~~~~~~--~~~~~~---------~~~-----~~~~~~~~D~~ 91 (190)
..+++|+|||||||+|+.+++.|+... -..+.++.|...+.. +.+..+ .+. .++..+.+|+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 488999999999999999999999973 247888877655443 222221 111 57888889998
Q ss_pred cccc-----------CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEecceec
Q 029640 92 EPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVY 151 (190)
Q Consensus 92 ~~~~-----------~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS~~~~ 151 (190)
++.+ .++|+|||+|+-+.. .+.......+|+.|+.++++.|++... -++++||+++.
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN 159 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence 7643 259999999986542 334455689999999999999999874 69999998876
No 264
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.34 E-value=4.9e-12 Score=92.41 Aligned_cols=118 Identities=19% Similarity=0.103 Sum_probs=93.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV 98 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~ 98 (190)
+.+.++||||+..||+++++.|.+. |+.|.+.+++....+.....+.....-..+.+|+.++.. ..+
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 5688999999999999999999999 899999999877666655555544455678899998642 249
Q ss_pred CEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc-------CCeEEEEecce
Q 029640 99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-------GARILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~i~vSS~~ 149 (190)
++++||||++.+.. ..+++.+.+.+|+.+++.+.+++.+. +.++|.+||.-
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV 153 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV 153 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh
Confidence 99999999887532 34567788999999999887776432 34899999943
No 265
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.34 E-value=2.1e-11 Score=91.15 Aligned_cols=99 Identities=25% Similarity=0.325 Sum_probs=74.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc--------CCcCEEEEc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIYHL 104 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------~~~d~vi~~ 104 (190)
|+++|||++|+||+++++.|+++ .+|+++.|+.. .+++|+.+.+. .++|+|||+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~--~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR--HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc--CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 47999999999999999999987 78888887532 34678877532 369999999
Q ss_pred cCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 105 ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
||...... ..+.+.+.+++|+.++.++++.+.+. +.+++++||..
T Consensus 63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 99654321 12234556899999999999887653 23788888754
No 266
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.34 E-value=2.9e-11 Score=94.72 Aligned_cols=121 Identities=18% Similarity=0.138 Sum_probs=89.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc----CCceEEEeccccccc-----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPL----------- 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~----------- 94 (190)
+.++.++|||++..||++++..|++. |.+|.+.+|+.+........+.. ..++..+.+|+.+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999 99999999987766555444432 245889999999753
Q ss_pred --cCCcCEEEEccCCCCCcc-----cccCchhHHHHHHHH-HHHHHHHHH----HcCC-eEEEEecceec
Q 029640 95 --LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIG-TLNMLGLAK----RVGA-RILLTSTSEVY 151 (190)
Q Consensus 95 --~~~~d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~-~~~l~~~~~----~~~~-~~i~vSS~~~~ 151 (190)
+.++|++|||||...... +++.++.++++|+.+ ...+.+.+. +.+. .++++||...+
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~ 154 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV 154 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 346999999999665331 234466689999995 555555553 2233 78888886543
No 267
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.33 E-value=4.9e-11 Score=91.25 Aligned_cols=108 Identities=20% Similarity=0.213 Sum_probs=76.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcC-CCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc--------cCCcCEEEE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQIYH 103 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~d~vi~ 103 (190)
|+++||||+|+||+++++.|++++ +..+....|..... ....++.++++|+.+.. ..++|+|||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~ 73 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN 73 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 589999999999999999999983 34565555543221 12347889999999864 246999999
Q ss_pred ccCCCCCcc-------cc---cCchhHHHHHHHHHHHHHHHHHH----cC-CeEEEEec
Q 029640 104 LACPASPIF-------YK---YNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTST 147 (190)
Q Consensus 104 ~ag~~~~~~-------~~---~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~i~vSS 147 (190)
|||...... .. +.....+.+|+.++..+++.+.. .+ .+++++||
T Consensus 74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss 132 (235)
T PRK09009 74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISA 132 (235)
T ss_pred CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEee
Confidence 999764210 01 12335689999999888777643 23 37888887
No 268
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.33 E-value=4.1e-11 Score=92.51 Aligned_cols=121 Identities=21% Similarity=0.197 Sum_probs=85.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC-hhhhhhhhc-C--CceEEEeccccc-cc----------
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-H--PRFELIRHDVTE-PL---------- 94 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~-~~~~~~~~~-~--~~~~~~~~D~~~-~~---------- 94 (190)
+.+++++|||+++.||+.+++.|+++ |+.|++..|+.... .+.+..... . ..+.+..+|+++ ..
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE-GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 46799999999999999999999977 88888777765541 222221111 1 357778899997 42
Q ss_pred --cCCcCEEEEccCCCCC--cc---cccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEecceec
Q 029640 95 --LIEVDQIYHLACPASP--IF---YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVY 151 (190)
Q Consensus 95 --~~~~d~vi~~ag~~~~--~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS~~~~ 151 (190)
+.++|++|||||.... .. ..+..+..+.+|+.+...+.+.+...-. ++|++||....
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~ 147 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL 147 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc
Confidence 2349999999997542 11 2234566899999999888875544333 89999996644
No 269
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.33 E-value=2e-11 Score=94.83 Aligned_cols=118 Identities=12% Similarity=0.052 Sum_probs=82.0
Q ss_pred EEEEEcccchHHHHHHHHHHhc---CCCeEEEEcCCCCCChhhhhhhhc---CCceEEEeccccccccC-----------
Q 029640 34 RILVTGGAGFIGSHLVDKLMEN---EKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI----------- 96 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~---~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~----------- 96 (190)
.++||||+++||+++++.|++. .|++|+++.|+.+........+.. ...+.++.+|+.+....
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 5899999999999999999972 378999999876544433333322 34688899999986311
Q ss_pred -----CcCEEEEccCCCCCc---cc----ccCchhHHHHHHHHHHHHHHHHHH----c-C--CeEEEEecceec
Q 029640 97 -----EVDQIYHLACPASPI---FY----KYNPVKTIKTNVIGTLNMLGLAKR----V-G--ARILLTSTSEVY 151 (190)
Q Consensus 97 -----~~d~vi~~ag~~~~~---~~----~~~~~~~~~~n~~~~~~l~~~~~~----~-~--~~~i~vSS~~~~ 151 (190)
+.|+||||||..... .. .+..+..+++|+.++..+.+.+.+ . + .++|++||...+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~ 155 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI 155 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC
Confidence 126999999964321 11 123456899999999887766532 2 2 379999996543
No 270
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.30 E-value=1e-11 Score=92.73 Aligned_cols=115 Identities=26% Similarity=0.273 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh--hhhhhhhcCCceEEEeccccccc------------c
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIGHPRFELIRHDVTEPL------------L 95 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~------------~ 95 (190)
.+||++++||+.|.||+++.+.|++. +..+.++..+.+..+ .+++.+.+.+++.|+++|+++.. +
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~k-gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEK-GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHc-CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 47899999999999999999999999 776666665555433 33444556789999999999853 3
Q ss_pred CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHH----HHHHHHc-C---CeEEEEecce
Q 029640 96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM----LGLAKRV-G---ARILLTSTSE 149 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~-~---~~~i~vSS~~ 149 (190)
..+|++||.||+.. +.+.+.++.+|+.+..+- +.+..+. + .-+|.+||..
T Consensus 82 g~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~ 139 (261)
T KOG4169|consen 82 GTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA 139 (261)
T ss_pred CceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc
Confidence 35999999999765 446788899998776554 4444333 2 2588999844
No 271
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.29 E-value=4.3e-11 Score=91.60 Aligned_cols=118 Identities=10% Similarity=0.062 Sum_probs=82.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------cC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~ 96 (190)
+++++++|||+++.||+++++.|+++ |++|.++.|+.+...+....+.. ..++..+.+|+.+.+ +.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999 89999998876544333332221 235777889998863 23
Q ss_pred -CcCEEEEccCCCCCc--cccc---CchhHHHHHHHHHHHHHHHH----HHcC--CeEEEEecc
Q 029640 97 -EVDQIYHLACPASPI--FYKY---NPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTS 148 (190)
Q Consensus 97 -~~d~vi~~ag~~~~~--~~~~---~~~~~~~~n~~~~~~l~~~~----~~~~--~~~i~vSS~ 148 (190)
++|++|||||..... ..+. ...+.+++|+.++..+.+.+ .+.+ ..+|++||.
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~ 145 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISH 145 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecC
Confidence 699999999743321 1121 23345677888877665544 3333 389999984
No 272
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.28 E-value=4.6e-11 Score=88.34 Aligned_cols=121 Identities=23% Similarity=0.262 Sum_probs=80.7
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC---hhhhhhhhc-CCceEEEecccccccc------------CC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS---KDNLRKWIG-HPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~---~~~~~~~~~-~~~~~~~~~D~~~~~~------------~~ 97 (190)
+++||||.|.||..+++.|++++..+++++.|+.... ...+..+.. ...+.++++|++|++. ..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6899999999999999999999667899999983211 223444432 4588999999998642 35
Q ss_pred cCEEEEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecce-ecCCC
Q 029640 98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE-VYGDP 154 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~-~~~~~ 154 (190)
++.|||+||...... ..+.....+...+.++.+|.+++...+. .+|++||.. ++|..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~ 144 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP 144 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc
Confidence 899999999765422 1223445688889999999999988887 788889977 45543
No 273
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=1.6e-11 Score=91.79 Aligned_cols=130 Identities=25% Similarity=0.259 Sum_probs=96.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-------cCCcCEEEE
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYH 103 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------~~~~d~vi~ 103 (190)
+++|+|||++|.+|+++.+.+..++. .+-.++.- .-.+|+++.+ ..++..|||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-------------------skd~DLt~~a~t~~lF~~ekPthVIh 61 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-------------------SKDADLTNLADTRALFESEKPTHVIH 61 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-------------------cccccccchHHHHHHHhccCCceeee
Confidence 47899999999999999999999842 12222211 1124555432 357999999
Q ss_pred ccCCCCCcc-cccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCCCCCCCCCCCCccCCCCCCcccchhhhhH
Q 029640 104 LACPASPIF-YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGMFSFVLKDGI 181 (190)
Q Consensus 104 ~ag~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~~~y~~~~~ 181 (190)
.|+-++.-+ .-..+.+.+..|+.--.|++..|.++++ +++++.|+|+|+...+.|++|.......|......| .+
T Consensus 62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gY---sy 138 (315)
T KOG1431|consen 62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGY---SY 138 (315)
T ss_pred hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHH---HH
Confidence 998555322 2345678899999999999999999998 899999999999999999999976555555555567 44
Q ss_pred HH
Q 029640 182 MK 183 (190)
Q Consensus 182 sK 183 (190)
.|
T Consensus 139 AK 140 (315)
T KOG1431|consen 139 AK 140 (315)
T ss_pred HH
Confidence 46
No 274
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.25 E-value=4.3e-11 Score=90.62 Aligned_cols=146 Identities=25% Similarity=0.291 Sum_probs=117.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC-ChhhhhhhhcC------CceEEEecccccccc-------CC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWIGH------PRFELIRHDVTEPLL-------IE 97 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~-~~~~~~~~~~~------~~~~~~~~D~~~~~~-------~~ 97 (190)
.+..||||-+|.=|+.|++.|+.. |++|..+.|+... ....+.++... .......+|++|... .+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~K-gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSK-GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhC-CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 367999999999999999999999 8999988776543 33445555432 356677799999743 46
Q ss_pred cCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC----CeEEEEecceecCCCCCCCCCCCCccCCCCCCcc
Q 029640 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGMF 173 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~i~vSS~~~~~~~~~~~~~e~~~~~~~~~~~~ 173 (190)
++-|.|.|+...+..+.+-++..-++...|+.+|+++.+.++ +|+...||...||.....|-+|. +|+.|.
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~-----TPFyPR 181 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSET-----TPFYPR 181 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccC-----CCCCCC
Confidence 889999999877766666777778889999999999988775 48999999999998888888888 799999
Q ss_pred cchhhhhHHHHhh
Q 029640 174 SFVLKDGIMKLIG 186 (190)
Q Consensus 174 ~~y~~~~~sK~~~ 186 (190)
++| +.+|..+
T Consensus 182 SPY---a~aKmy~ 191 (376)
T KOG1372|consen 182 SPY---AAAKMYG 191 (376)
T ss_pred Chh---HHhhhhh
Confidence 999 6668653
No 275
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.23 E-value=2e-10 Score=85.83 Aligned_cols=118 Identities=20% Similarity=0.179 Sum_probs=82.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC-CCCChhhhhhh-hcCCceEEEeccccccc--------------c
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKW-IGHPRFELIRHDVTEPL--------------L 95 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~-~~~~~~~~~~~-~~~~~~~~~~~D~~~~~--------------~ 95 (190)
.+.++||||+..||..|++.|++..+-++++..++ ++.....+..+ ....+++.++.|++..+ .
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 36699999999999999999999866665555444 44433333332 23579999999999764 2
Q ss_pred CCcCEEEEccCCCCCcccccC-----chhHHHHHHHHHHHHHHHH-------HHc------CC---eEEEEecce
Q 029640 96 IEVDQIYHLACPASPIFYKYN-----PVKTIKTNVIGTLNMLGLA-------KRV------GA---RILLTSTSE 149 (190)
Q Consensus 96 ~~~d~vi~~ag~~~~~~~~~~-----~~~~~~~n~~~~~~l~~~~-------~~~------~~---~~i~vSS~~ 149 (190)
.++|++|+|||+......... .-+.+++|..++..+.+.+ +.+ .+ .+|++||.+
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~ 157 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA 157 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence 369999999997765433222 3346899998887766654 111 12 588999865
No 276
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.23 E-value=2.1e-10 Score=91.32 Aligned_cols=118 Identities=11% Similarity=0.084 Sum_probs=78.4
Q ss_pred cCCCEEEEEcc--cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh----------cC----CceEEEecccc--
Q 029640 30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----------GH----PRFELIRHDVT-- 91 (190)
Q Consensus 30 ~~~~~vlItG~--~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~----------~~----~~~~~~~~D~~-- 91 (190)
+++|+++|||+ +..||.++++.|++. |.+|++ .|+.+..+.....+. .. .....+.+|+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~-Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA-GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC-CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 58899999999 799999999999999 888877 444332221111110 00 11355677772
Q ss_pred ccc------------------------------cCCcCEEEEccCCCCC---c---ccccCchhHHHHHHHHHHHHHHHH
Q 029640 92 EPL------------------------------LIEVDQIYHLACPASP---I---FYKYNPVKTIKTNVIGTLNMLGLA 135 (190)
Q Consensus 92 ~~~------------------------------~~~~d~vi~~ag~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~ 135 (190)
+.+ +.++|++|||||.... . ...+.+...+++|+.++..+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 111 2359999999974321 1 123345667999999999998877
Q ss_pred HHc---CCeEEEEecce
Q 029640 136 KRV---GARILLTSTSE 149 (190)
Q Consensus 136 ~~~---~~~~i~vSS~~ 149 (190)
... ..++|++||..
T Consensus 165 ~p~m~~~G~II~isS~a 181 (303)
T PLN02730 165 GPIMNPGGASISLTYIA 181 (303)
T ss_pred HHHHhcCCEEEEEechh
Confidence 543 24899999855
No 277
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.22 E-value=8.3e-11 Score=92.71 Aligned_cols=96 Identities=22% Similarity=0.324 Sum_probs=72.3
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----c------CC-cCEE
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----L------IE-VDQI 101 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~------~~-~d~v 101 (190)
+|+||||||++|+++++.|+++ +++|+++.|++.... ...+..+.+|+.|.+ + .+ +|.|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~-g~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v 71 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA-SVPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAV 71 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC-CCcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEE
Confidence 4899999999999999999999 899999999765432 124556678888753 2 35 8999
Q ss_pred EEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceec
Q 029640 102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151 (190)
Q Consensus 102 i~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~ 151 (190)
+|+++... .. .....+++++|++.++ |+|++||..++
T Consensus 72 ~~~~~~~~------~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 72 YLVAPPIP------DL-------APPMIKFIDFARSKGVRRFVLLSASIIE 109 (285)
T ss_pred EEeCCCCC------Ch-------hHHHHHHHHHHHHcCCCEEEEeeccccC
Confidence 99986321 00 1234678999999997 89999986643
No 278
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.13 E-value=1.6e-09 Score=78.68 Aligned_cols=103 Identities=14% Similarity=0.204 Sum_probs=79.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-----CCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~d~vi~~ag~ 107 (190)
|+|.|+|++|.+|+.++++..++ ||+|+++.|++.+.... +.+..++.|+.|.+. .+.|+||..-+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~ 72 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGA 72 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccC
Confidence 68999999999999999999999 99999999976654431 467888999998754 579999998875
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~ 151 (190)
..+. .++ ........+++..+..++ |++.|+.++..
T Consensus 73 ~~~~-----~~~---~~~k~~~~li~~l~~agv~RllVVGGAGSL 109 (211)
T COG2910 73 GASD-----NDE---LHSKSIEALIEALKGAGVPRLLVVGGAGSL 109 (211)
T ss_pred CCCC-----hhH---HHHHHHHHHHHHHhhcCCeeEEEEcCccce
Confidence 4321 111 122335678888898887 99999987643
No 279
>PRK06720 hypothetical protein; Provisional
Probab=99.12 E-value=1e-09 Score=80.21 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=59.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------------cC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI 96 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~ 96 (190)
+++++++||||+++||+.+++.|++. |.+|.+.+|+.+........+.. ...+.++.+|+.+.. +.
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS 92 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999998 89999998865433222222211 235677889998753 23
Q ss_pred CcCEEEEccCCCC
Q 029640 97 EVDQIYHLACPAS 109 (190)
Q Consensus 97 ~~d~vi~~ag~~~ 109 (190)
++|++|||||...
T Consensus 93 ~iDilVnnAG~~~ 105 (169)
T PRK06720 93 RIDMLFQNAGLYK 105 (169)
T ss_pred CCCEEEECCCcCC
Confidence 6999999999655
No 280
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.12 E-value=4.3e-10 Score=109.00 Aligned_cols=122 Identities=20% Similarity=0.138 Sum_probs=89.9
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC----------h---------------------------
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS----------K--------------------------- 71 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~----------~--------------------------- 71 (190)
+..+++++||||++.||..+++.|+++++++|++++|+.... .
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence 346899999999999999999999998668999999872100 0
Q ss_pred ----------hhhhhhh-cCCceEEEecccccccc-----------CCcCEEEEccCCCCCcc----cccCchhHHHHHH
Q 029640 72 ----------DNLRKWI-GHPRFELIRHDVTEPLL-----------IEVDQIYHLACPASPIF----YKYNPVKTIKTNV 125 (190)
Q Consensus 72 ----------~~~~~~~-~~~~~~~~~~D~~~~~~-----------~~~d~vi~~ag~~~~~~----~~~~~~~~~~~n~ 125 (190)
..+..+. ....+.++.+|++|... .++|+|||+||...... ..+.+...+++|+
T Consensus 2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813 2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence 0011111 12467889999999632 25999999999755322 2344666899999
Q ss_pred HHHHHHHHHHHHcCC-eEEEEeccee
Q 029640 126 IGTLNMLGLAKRVGA-RILLTSTSEV 150 (190)
Q Consensus 126 ~~~~~l~~~~~~~~~-~~i~vSS~~~ 150 (190)
.++.++++++..... +||++||...
T Consensus 2154 ~G~~~Ll~al~~~~~~~IV~~SSvag 2179 (2582)
T TIGR02813 2154 DGLLSLLAALNAENIKLLALFSSAAG 2179 (2582)
T ss_pred HHHHHHHHHHHHhCCCeEEEEechhh
Confidence 999999999987664 7999999763
No 281
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.02 E-value=1.6e-09 Score=84.76 Aligned_cols=116 Identities=22% Similarity=0.205 Sum_probs=86.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhh---cCCceEEEecccccccc------------CC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL------------IE 97 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~------------~~ 97 (190)
.+++||||+..||++++..+..+ |+.|.++.|+.++.......+. ....+.+..+|+.|.+. ..
T Consensus 34 ~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 68999999999999999999999 9999999997655544443332 22346688899976531 24
Q ss_pred cCEEEEccCCCCCccccc-C---chhHHHHHHHHHHHHHHHHHH----cC-C-eEEEEecce
Q 029640 98 VDQIYHLACPASPIFYKY-N---PVKTIKTNVIGTLNMLGLAKR----VG-A-RILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~~-~---~~~~~~~n~~~~~~l~~~~~~----~~-~-~~i~vSS~~ 149 (190)
+|.+|||||...+...++ + .+..+++|+.++.+++++... .. . +++.+||..
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~ 174 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL 174 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence 999999999777655443 2 335689999999999876643 22 2 788898844
No 282
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.00 E-value=7.2e-09 Score=81.16 Aligned_cols=117 Identities=22% Similarity=0.218 Sum_probs=86.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC--------------
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------------- 96 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-------------- 96 (190)
..+-|+|||.-...|+.+++.|.++ |..|++-.-.++..+ .+......++...++.|+++++..
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~-Gf~V~Agcl~~~gae-~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKK-GFRVFAGCLTEEGAE-SLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhc-CCEEEEEeecCchHH-HHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 4577999999999999999999999 899999874433333 333333367888899999987532
Q ss_pred CcCEEEEccCCCCCcc-----cccCchhHHHHHHHHHHHHHHHH----HHcCCeEEEEecce
Q 029640 97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSE 149 (190)
Q Consensus 97 ~~d~vi~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~i~vSS~~ 149 (190)
+.=.||||||+..... ..++....+++|+.|+.++.+.. ++...|+|++||.+
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~ 167 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL 167 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc
Confidence 4778999999654321 12345567999999998877665 45556999999954
No 283
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.95 E-value=7.4e-09 Score=79.28 Aligned_cols=97 Identities=25% Similarity=0.372 Sum_probs=68.8
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCCCC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACPAS 109 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~~~ 109 (190)
|+|+||+|.+|+.+++.|++. +++|.++.|+.. ......+. ..+++.+.+|..|.+ +.++|+||++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~-~~~V~~l~R~~~--~~~~~~l~-~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA-GFSVRALVRDPS--SDRAQQLQ-ALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TGCEEEEESSSH--HHHHHHHH-HTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhC-CCCcEEEEeccc--hhhhhhhh-cccceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 789999999999999999997 899999999752 11222222 236688899998764 568999999886432
Q ss_pred CcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 029640 110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147 (190)
Q Consensus 110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS 147 (190)
. .......++++++++.+++.+..||
T Consensus 77 ~------------~~~~~~~~li~Aa~~agVk~~v~ss 102 (233)
T PF05368_consen 77 P------------SELEQQKNLIDAAKAAGVKHFVPSS 102 (233)
T ss_dssp C------------CHHHHHHHHHHHHHHHT-SEEEESE
T ss_pred h------------hhhhhhhhHHHhhhccccceEEEEE
Confidence 1 1233457899999999984444565
No 284
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.94 E-value=4.5e-09 Score=78.12 Aligned_cols=116 Identities=18% Similarity=0.169 Sum_probs=85.4
Q ss_pred CCEEEEEc-ccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc-------------CC
Q 029640 32 NMRILVTG-GAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IE 97 (190)
Q Consensus 32 ~~~vlItG-~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------------~~ 97 (190)
.+.|+||| +.|.||.+|++++.+. |+.|.+..|+.+...+... ..++.....|+.+++. .+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~-G~~V~AtaR~~e~M~~L~~----~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARN-GYLVYATARRLEPMAQLAI----QFGLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhC-CeEEEEEccccchHhhHHH----hhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 37788886 5799999999999999 9999999998776654432 3367888899998742 24
Q ss_pred cCEEEEccCCCCCcccc----cCchhHHHHHHHHHHHHHHHHH----HcCCeEEEEecceecC
Q 029640 98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~~~i~vSS~~~~~ 152 (190)
+|+++||||........ ..-+..|++|+-|..+..++.. +.+..+|++.|...|-
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v 144 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV 144 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe
Confidence 99999999965532211 2244578999888777666554 3344899999966543
No 285
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.93 E-value=1.4e-08 Score=80.83 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=72.9
Q ss_pred cCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCC---------CCCh-hhhhh--------------h-hcCCc
Q 029640 30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYF---------TGSK-DNLRK--------------W-IGHPR 82 (190)
Q Consensus 30 ~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~---------~~~~-~~~~~--------------~-~~~~~ 82 (190)
+++|+++|||++ ..||+++++.|+++ |.+|.+.++.+ +... ..... + .+...
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~-Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~ 84 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEA-GATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT 84 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHC-CCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence 478999999995 89999999999999 89988865431 0000 00000 0 00001
Q ss_pred eEEEeccccc---------c-----------ccCCcCEEEEccCCCC---Ccc---cccCchhHHHHHHHHHHHHHHHHH
Q 029640 83 FELIRHDVTE---------P-----------LLIEVDQIYHLACPAS---PIF---YKYNPVKTIKTNVIGTLNMLGLAK 136 (190)
Q Consensus 83 ~~~~~~D~~~---------~-----------~~~~~d~vi~~ag~~~---~~~---~~~~~~~~~~~n~~~~~~l~~~~~ 136 (190)
.+-+.+|+.+ + .+.++|++|||||... ... ..+.++..+++|+.++.++.+++.
T Consensus 85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~ 164 (299)
T PRK06300 85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG 164 (299)
T ss_pred CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 1112122222 0 1235999999998532 111 123455678999999999988875
Q ss_pred Hc---CCeEEEEecce
Q 029640 137 RV---GARILLTSTSE 149 (190)
Q Consensus 137 ~~---~~~~i~vSS~~ 149 (190)
.. ..++|++||..
T Consensus 165 p~m~~~G~ii~iss~~ 180 (299)
T PRK06300 165 PIMNPGGSTISLTYLA 180 (299)
T ss_pred HHhhcCCeEEEEeehh
Confidence 43 23788888744
No 286
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.91 E-value=3.9e-09 Score=81.18 Aligned_cols=110 Identities=22% Similarity=0.224 Sum_probs=81.4
Q ss_pred ccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------------c-CCcCEEEE
Q 029640 39 GGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L-IEVDQIYH 103 (190)
Q Consensus 39 G~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~-~~~d~vi~ 103 (190)
|++ +.||+++++.|+++ |++|++++|+.+.....+..+........+.+|+.+++ + .++|++||
T Consensus 1 g~~~s~GiG~aia~~l~~~-Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~ 79 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE-GANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVN 79 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT-TEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred CCCCCCChHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence 556 99999999999999 89999999987765444555543334557999999863 3 57999999
Q ss_pred ccCCCCC-----cc---cccCchhHHHHHHHHHHHHHHHHHHc---CCeEEEEecce
Q 029640 104 LACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSE 149 (190)
Q Consensus 104 ~ag~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~ 149 (190)
|+|.... .. ..+.....+++|+.+...+++.+.+. +.++|++||..
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~ 136 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA 136 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh
Confidence 9986553 11 11234567899999999998888543 23799999854
No 287
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.87 E-value=4.5e-08 Score=78.42 Aligned_cols=116 Identities=16% Similarity=0.072 Sum_probs=80.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcC-CCeEEEEcCCCCCChhhhhhhhcC-CceEEEe-ccccc--cccCCcCEEEEc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGH-PRFELIR-HDVTE--PLLIEVDQIYHL 104 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~-~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~D~~~--~~~~~~d~vi~~ 104 (190)
.+|++|.|+|++|.||..++..|+.++ ..++.++++. .......++.+. ....... .|..+ +++.++|+||++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit 83 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLIC 83 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence 478899999999999999999998663 3578888882 222211122111 1222221 12122 456789999999
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecce
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~ 149 (190)
+|.... ...+..+.+..|+..+.++++.+++++. ++|+++|--
T Consensus 84 aG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNP 127 (321)
T PTZ00325 84 AGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNP 127 (321)
T ss_pred CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 996432 2345677899999999999999999997 899998844
No 288
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.86 E-value=7.9e-09 Score=76.11 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=68.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------------CCcCE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVDQ 100 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------------~~~d~ 100 (190)
|+++||||+|++|. +++.|+++ |++|.++.|+.+........+.....+.++.+|+.|.+. ..+|+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~-G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK-GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC-cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 57999999988775 99999999 899999888654332222222223468888999998642 24777
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCe-----EEEEeccee
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-----ILLTSTSEV 150 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~i~vSS~~~ 150 (190)
+|+.+- ..++.++.++|++.+++ ++++=...+
T Consensus 79 lv~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 79 AVAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAA 115 (177)
T ss_pred EEEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence 776652 33467899999988754 887765443
No 289
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.86 E-value=9.3e-09 Score=80.43 Aligned_cols=117 Identities=13% Similarity=0.077 Sum_probs=85.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC--CceEEEecccccccc-----------CCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPLL-----------IEV 98 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~-----------~~~ 98 (190)
+.=++|||||..||++.+++|+++ |.+|.+++|..++.+....++... ..++++..|..+... ..+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkr-G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKR-GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 455889999999999999999999 899999999888877666666544 458888899987652 236
Q ss_pred CEEEEccCCCCCc--cccc----CchhHHHHHHHHHHHHHHHHHH----cCC-eEEEEecce
Q 029640 99 DQIYHLACPASPI--FYKY----NPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSE 149 (190)
Q Consensus 99 d~vi~~ag~~~~~--~~~~----~~~~~~~~n~~~~~~l~~~~~~----~~~-~~i~vSS~~ 149 (190)
-++|||+|..... ...+ ....++.+|+.++..+.+.... .+. -++++||..
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~a 189 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFA 189 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccc
Confidence 6899999966521 1111 2235678888888777666532 232 699999843
No 290
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.85 E-value=5e-09 Score=75.67 Aligned_cols=118 Identities=17% Similarity=0.133 Sum_probs=84.7
Q ss_pred ccccCCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc-----ccCCcCE
Q 029640 27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQ 100 (190)
Q Consensus 27 ~~~~~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~ 100 (190)
++-+.+|..+|.|++|-.|+.+++.+++++. .+|+++.|+....+.. ...+.....|.... ...++|+
T Consensus 13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~a~~~qg~dV 86 (238)
T KOG4039|consen 13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQLATNEQGPDV 86 (238)
T ss_pred HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHHHhhhcCCce
Confidence 4446789999999999999999999999854 5888888874332221 12344444555432 3468999
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEecceecCC
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD 153 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~~~~ 153 (190)
.|++.|-+.. ....+..++++-.....+.+++++.++ +++++||.++...
T Consensus 87 ~FcaLgTTRg---kaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s 137 (238)
T KOG4039|consen 87 LFCALGTTRG---KAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS 137 (238)
T ss_pred EEEeeccccc---ccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc
Confidence 9999985543 223445566667777788999999998 8999999876543
No 291
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.83 E-value=1.3e-09 Score=78.57 Aligned_cols=117 Identities=20% Similarity=0.135 Sum_probs=88.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC--------CcCEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQI 101 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--------~~d~v 101 (190)
+.|+.|++||+.-.||+.+++.|.+. |..|+++.|++.......++- ..-+..+.+|+.+.+.. .+|.+
T Consensus 5 laG~~vlvTgagaGIG~~~v~~La~a-GA~ViAvaR~~a~L~sLV~e~--p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 5 LAGVIVLVTGAGAGIGKEIVLSLAKA-GAQVIAVARNEANLLSLVKET--PSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred ccceEEEeecccccccHHHHHHHHhc-CCEEEEEecCHHHHHHHHhhC--CcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 47899999999999999999999999 899999999766554443321 23488899999986432 38999
Q ss_pred EEccCCCCCcc----cccCchhHHHHHHHHHHHHHHHHHH----cC--CeEEEEecce
Q 029640 102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSE 149 (190)
Q Consensus 102 i~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~i~vSS~~ 149 (190)
+|+||+.-... .+++.+..|++|+.+..++.+..++ +. ..++.+||.+
T Consensus 82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqa 139 (245)
T KOG1207|consen 82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQA 139 (245)
T ss_pred hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchh
Confidence 99999654322 2345666789999999888877543 22 2699999955
No 292
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.79 E-value=1.2e-08 Score=78.68 Aligned_cols=91 Identities=16% Similarity=0.094 Sum_probs=68.5
Q ss_pred HHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc---------CCcCEEEEccCCCCCcccccCch
Q 029640 48 LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYHLACPASPIFYKYNPV 118 (190)
Q Consensus 48 l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---------~~~d~vi~~ag~~~~~~~~~~~~ 118 (190)
+++.|+++ |++|++++|+..... ...++++|+.+.+. .++|+||||||... ....+
T Consensus 1 ~a~~l~~~-G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~ 65 (241)
T PRK12428 1 TARLLRFL-GARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVE 65 (241)
T ss_pred ChHHHHhC-CCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHH
Confidence 46788888 899999988654321 13467889987632 25999999998653 23567
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCeEEEEecceecCC
Q 029640 119 KTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGD 153 (190)
Q Consensus 119 ~~~~~n~~~~~~l~~~~~~~---~~~~i~vSS~~~~~~ 153 (190)
..+++|+.++..+++.+.+. +.++|++||...|+.
T Consensus 66 ~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~ 103 (241)
T PRK12428 66 LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEW 103 (241)
T ss_pred HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhcc
Confidence 88999999999999988653 249999999988763
No 293
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.4e-07 Score=77.14 Aligned_cols=117 Identities=20% Similarity=0.243 Sum_probs=74.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------c--C--CcC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------L--I--EVD 99 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~--~--~~d 99 (190)
.+.++|+|+||+|.+|+-+++.|+++ |+.|.++.|+.....+.+..........-+..|..... . . ...
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkr-gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKR-GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHC-CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 35689999999999999999999999 79999999976555444330000111111112221111 0 1 133
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEeccee
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~ 150 (190)
+++-++|... . +++....+++...++.|++++|+..++ |++++|+.+.
T Consensus 156 ~v~~~~ggrp--~-~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~ 204 (411)
T KOG1203|consen 156 IVIKGAGGRP--E-EEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG 204 (411)
T ss_pred eEEecccCCC--C-cccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecC
Confidence 4455554211 1 111223457889999999999999998 9999988553
No 294
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.6e-07 Score=73.08 Aligned_cols=104 Identities=21% Similarity=0.235 Sum_probs=73.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~ 107 (190)
++|+||||||++|+++++.|+++ +++|.+..|+.+...... ..+.+...|+.+.. ..+.|.++++.+.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~ 73 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGL 73 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence 57999999999999999999999 999999999766554332 47888889999864 3579999888864
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEeccee
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS~~~ 150 (190)
.. . .. ...........+..+.+. .+. +++++|....
T Consensus 74 ~~-~----~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~ 110 (275)
T COG0702 74 LD-G----SD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGA 110 (275)
T ss_pred cc-c----cc-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCC
Confidence 43 1 11 223334444444444444 233 6888876443
No 295
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.61 E-value=6.6e-07 Score=72.02 Aligned_cols=111 Identities=15% Similarity=0.114 Sum_probs=71.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcC------CCeEEEEcCCCCC--ChhhhhhhhcCCceEEEecccc---c--cccCCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNYFTG--SKDNLRKWIGHPRFELIRHDVT---E--PLLIEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~------~~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~---~--~~~~~~d 99 (190)
.+|+|||++|+||.+++..|+.++ +.++.++++.... ......++.+.. .....|+. + +.+.++|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~--~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA--FPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc--ccccCCceecCCHHHHhCCCC
Confidence 469999999999999999999853 2489999885432 111111111000 00011211 1 3456899
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-C-C-eEEEEec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-G-A-RILLTST 147 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~-~~i~vSS 147 (190)
+|||+||.... ...+..+.++.|+.-...+.+...++ + . .+|.+|.
T Consensus 81 iVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 81 VAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred EEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 99999996543 23456788999999999998888777 2 2 5666665
No 296
>PLN00106 malate dehydrogenase
Probab=98.55 E-value=2.5e-06 Score=68.52 Aligned_cols=113 Identities=12% Similarity=-0.021 Sum_probs=77.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC-CceEEEe-cccc--ccccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-PRFELIR-HDVT--EPLLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~D~~--~~~~~~~d~vi~~a 105 (190)
...+|.|+|++|.||..++..|+.++. .++.+++... ......++.+. ....... .+-. -+++.++|+||++|
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 347899999999999999999997643 4788888755 22111122111 1112211 0111 13567899999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEec
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS 147 (190)
|.... ......+.+..|+..+.++.+.+++++. .+|+++|
T Consensus 95 G~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvS 135 (323)
T PLN00106 95 GVPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIIS 135 (323)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 96543 2345677899999999999999999886 6777776
No 297
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.55 E-value=3.5e-07 Score=74.64 Aligned_cols=94 Identities=26% Similarity=0.306 Sum_probs=69.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLAC 106 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag 106 (190)
||+|+|.|+ |+||+.++..|++++..+|++.+|+.+......... ..++...++|+.|.. ..+.|+|||++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 578999996 999999999999994489999999644332221111 237899999999873 346899999995
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vS 146 (190)
... ..+++++|.+.++.++=+|
T Consensus 78 ~~~------------------~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 78 PFV------------------DLTILKACIKTGVDYVDTS 99 (389)
T ss_pred chh------------------hHHHHHHHHHhCCCEEEcc
Confidence 322 2367888888887777555
No 298
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.46 E-value=2.2e-07 Score=67.06 Aligned_cols=120 Identities=23% Similarity=0.292 Sum_probs=88.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------------cCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE 97 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~ 97 (190)
.++...+||||...+|+..++.|.++ |..|.+++-...+..+..+++. .++.|...|++.+. +.+
T Consensus 7 ~kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgr 83 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGR 83 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhccc
Confidence 36788999999999999999999999 8899888876666666666653 47788889998763 346
Q ss_pred cCEEEEccCCCCCccc----------ccCchhHHHHHHHHHHHHHHHHHHc---------CCe--EEEEecceecC
Q 029640 98 VDQIYHLACPASPIFY----------KYNPVKTIKTNVIGTLNMLGLAKRV---------GAR--ILLTSTSEVYG 152 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~--~i~vSS~~~~~ 152 (190)
.|+.+||||....... .++....+++|+.+++|+++..... +-| +|.+.|..+|.
T Consensus 84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd 159 (260)
T KOG1199|consen 84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD 159 (260)
T ss_pred eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence 9999999996543211 1233456889999999998866421 224 66666655554
No 299
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.44 E-value=1e-06 Score=67.35 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=86.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCC----eEEEEcCCCCCChhhhhhhh---c--CCceEEEeccccccc-------
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKN----EVIVVDNYFTGSKDNLRKWI---G--HPRFELIRHDVTEPL------- 94 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~----~v~~~~r~~~~~~~~~~~~~---~--~~~~~~~~~D~~~~~------- 94 (190)
+.|.++|||++..||..++..|++.... .+++..|+-++.++....+. + ...++++..|+++-.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 3477999999999999999999997332 46667887777766555543 3 346888999999853
Q ss_pred -----cCCcCEEEEccCCCCCcc-------------------------------cccCchhHHHHHHHHHHHHHHHHHHc
Q 029640 95 -----LIEVDQIYHLACPASPIF-------------------------------YKYNPVKTIKTNVIGTLNMLGLAKRV 138 (190)
Q Consensus 95 -----~~~~d~vi~~ag~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~ 138 (190)
+.++|.|+-|||.+.... +.++..++|+.|+-|.+-+++.....
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 346999999999765321 01122357999999998887766443
Q ss_pred C-----CeEEEEeccee
Q 029640 139 G-----ARILLTSTSEV 150 (190)
Q Consensus 139 ~-----~~~i~vSS~~~ 150 (190)
- -++|++||..+
T Consensus 162 l~~~~~~~lvwtSS~~a 178 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMA 178 (341)
T ss_pred hhcCCCCeEEEEeeccc
Confidence 2 28999999654
No 300
>PRK09620 hypothetical protein; Provisional
Probab=98.43 E-value=8.4e-07 Score=67.93 Aligned_cols=75 Identities=20% Similarity=0.453 Sum_probs=50.0
Q ss_pred CCCEEEEEccc----------------chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEec--cccc
Q 029640 31 SNMRILVTGGA----------------GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH--DVTE 92 (190)
Q Consensus 31 ~~~~vlItG~~----------------G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~--D~~~ 92 (190)
.|++|+||+|. ||+|+++++.|+.+ |++|+++.+.......... ....+..+.. |+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~-Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~ 77 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK-GAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQD 77 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC-CCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHH
Confidence 68999999886 99999999999999 8999988753221111110 0112333444 4443
Q ss_pred c---cc--CCcCEEEEccCCCC
Q 029640 93 P---LL--IEVDQIYHLACPAS 109 (190)
Q Consensus 93 ~---~~--~~~d~vi~~ag~~~ 109 (190)
. .+ .++|+|||+|+..+
T Consensus 78 ~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 78 KMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHhcccCCCEEEECccccc
Confidence 2 12 36899999999755
No 301
>PRK05086 malate dehydrogenase; Provisional
Probab=98.42 E-value=8.3e-06 Score=65.36 Aligned_cols=112 Identities=18% Similarity=0.098 Sum_probs=73.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhc-C-CCeEEEEcCCCCCChhhhhhhhcCC-ceEEEeccccc--cccCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMEN-E-KNEVIVVDNYFTGSKDNLRKWIGHP-RFELIRHDVTE--PLLIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~-~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~--~~~~~~d~vi~~ag~ 107 (190)
|+++|+|++|.+|++++..|... + ++++.+++|++. ......++.+.. .......+-.+ ..+.++|+||.++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence 68999999999999999988653 2 357788887643 211111221111 11221111222 345679999999986
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS 147 (190)
... ......+.+..|......+++.+++++. ++|.+.|
T Consensus 80 ~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 80 ARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 432 2345667899999999999999999876 6666665
No 302
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.35 E-value=1.2e-05 Score=57.05 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=75.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhh---hcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
|||.|+|++|.+|++++..|+..+- .++.+++++.........++ ............-..+++.+.|+||..||..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 6899999999999999999999842 57888888644333222222 1112222222222224567899999999864
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.. ..++..+.++.|..-...+.+...+..- .++.+|.
T Consensus 81 ~~--~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN 119 (141)
T PF00056_consen 81 RK--PGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN 119 (141)
T ss_dssp SS--TTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred cc--ccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence 32 2345677889999999999998888763 5666653
No 303
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.35 E-value=1.2e-06 Score=72.19 Aligned_cols=90 Identities=26% Similarity=0.246 Sum_probs=60.1
Q ss_pred EEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-----cCCcCEEEEccCCC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACPA 108 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi~~ag~~ 108 (190)
|+|.|+ |++|+.+++.|+++... +|.+.+|+.+........+ ...++.+.++|+.|.. ..++|+||||+|+.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 689999 99999999999999545 8999999655544333222 3568999999999864 34799999999754
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEE
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~ 144 (190)
. ...++++|.+.++++|=
T Consensus 79 ~------------------~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 79 F------------------GEPVARACIEAGVHYVD 96 (386)
T ss_dssp G------------------HHHHHHHHHHHT-EEEE
T ss_pred h------------------hHHHHHHHHHhCCCeec
Confidence 1 13466666666665554
No 304
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.29 E-value=6.7e-07 Score=67.22 Aligned_cols=117 Identities=19% Similarity=0.122 Sum_probs=68.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh-hhhhhcCCceEEEeccccccc------------cCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWIGHPRFELIRHDVTEPL------------LIE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~------------~~~ 97 (190)
.++-+++||++..||..++..+... +.+.....+.....+.. +..-. .........|++... ..+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~ae-d~e~~r~g~~r~~a~~~~L~v~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~gk 82 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAE-DDEALRYGVARLLAELEGLKVAY-GDDFVHVVGDITEEQLLGALREAPRKKGGK 82 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhc-chHHHHHhhhcccccccceEEEe-cCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence 4467999999999999999988887 44433332222221100 00000 011222233443321 235
Q ss_pred cCEEEEccCCCCCcc--c-----ccCchhHHHHHHHHHHHHHHHH----HHcC--CeEEEEecce
Q 029640 98 VDQIYHLACPASPIF--Y-----KYNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSE 149 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~i~vSS~~ 149 (190)
.|+||||||...+.. + .+.+..+|+.|+.++..+...+ ++.+ .-+|++||..
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~a 147 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLA 147 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchh
Confidence 999999999666521 1 1235568999999887776544 3443 2588999854
No 305
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.20 E-value=5.5e-06 Score=63.52 Aligned_cols=64 Identities=19% Similarity=0.376 Sum_probs=43.2
Q ss_pred cccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccc-------cccCCcCEEEEccCCCC
Q 029640 39 GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-------PLLIEVDQIYHLACPAS 109 (190)
Q Consensus 39 G~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-------~~~~~~d~vi~~ag~~~ 109 (190)
.++|++|+++++.|+++ |++|+++.|....... ....+.++.++..+ ....++|+|||+||...
T Consensus 23 ~SSG~iG~aLA~~L~~~-G~~V~li~r~~~~~~~------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 23 HSTGQLGKIIAETFLAA-GHEVTLVTTKTAVKPE------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred ccchHHHHHHHHHHHhC-CCEEEEEECcccccCC------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 56899999999999999 8999998775322110 01245555443322 12346899999999765
No 306
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.18 E-value=3.3e-05 Score=53.22 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=55.4
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEE-EcCCCCCChhhhhhhhc--CCceEEEeccccccccCCcCEEEEccCCCCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLACPASP 110 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~-~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~ 110 (190)
||.|.|++|++|+.+++.|.++...++.. +.++. .....+....+ .......-.+.....+.++|+||.|.+..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~-- 77 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR-SAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHG-- 77 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT-TTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHH--
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc-ccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchh--
Confidence 68999999999999999999986655444 44443 12222222211 11112222223334457899999997411
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 029640 111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147 (190)
Q Consensus 111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS 147 (190)
....+...+.+.++++|=.|+
T Consensus 78 ----------------~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 78 ----------------ASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp ----------------HHHHHHHHHHHTTSEEEESSS
T ss_pred ----------------HHHHHHHHHhhCCcEEEeCCH
Confidence 124566666777776665554
No 307
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.17 E-value=1.9e-05 Score=63.52 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=71.7
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCC------eEEEEcCCC--CCChhhhhhhhcC-----CceEEEeccccccccCCcCE
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYF--TGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVDQ 100 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~------~v~~~~r~~--~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~d~ 100 (190)
+|.|+|++|.+|..++..|+..+-. ++.+++++. +...-...++.+. ..+. +. +-..+.+.++|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~-i~-~~~~~~~~~aDi 79 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVV-IT-TDPEEAFKDVDV 79 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcE-Ee-cChHHHhCCCCE
Confidence 6999999999999999999986322 488888765 2222111111110 0111 11 112245568999
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CC--eEEEEec
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA--RILLTST 147 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~--~~i~vSS 147 (190)
|||.||.... ..+...+.+..|..-...+....+++ +. .+|.+|.
T Consensus 80 VVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN 127 (323)
T cd00704 80 AILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN 127 (323)
T ss_pred EEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 9999996432 33456778999999999999888877 33 5666664
No 308
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.17 E-value=2.6e-05 Score=64.12 Aligned_cols=104 Identities=17% Similarity=0.195 Sum_probs=63.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEE-eccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELI-RHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
+.++|.|.||||++|+.+++.|.++...++..+.+...... .+...... ...+.. ..++....+.++|+||.+.+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~-~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~ 115 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ-SFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHG 115 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC-CchhhCccccCccccceecCCHHHhcCCCEEEEcCCHH
Confidence 55799999999999999999999997778888776433221 11111000 000111 0122222246799999987521
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCC
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP 154 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~ 154 (190)
....++..+ +.++++|-.|+.+-+.+.
T Consensus 116 ------------------~s~~i~~~~-~~g~~VIDlSs~fRl~~~ 142 (381)
T PLN02968 116 ------------------TTQEIIKAL-PKDLKIVDLSADFRLRDI 142 (381)
T ss_pred ------------------HHHHHHHHH-hCCCEEEEcCchhccCCc
Confidence 234555555 356799999997765543
No 309
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.15 E-value=1.7e-05 Score=66.63 Aligned_cols=76 Identities=22% Similarity=0.236 Sum_probs=56.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh-hhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
+++++++|+|+++ +|..+++.|++. |++|+++++.....- .....+ ...++.++..|..+....++|+||+++|..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKL-GAKVILTDEKEEDQLKEALEEL-GELGIELVLGEYPEEFLEGVDLVVVSPGVP 79 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHH-HhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence 3679999999777 999999999999 899999988642221 112222 233567888888876666799999999853
No 310
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.12 E-value=8e-06 Score=60.94 Aligned_cols=76 Identities=12% Similarity=0.156 Sum_probs=51.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc-----ccCCcCEEEEc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHL 104 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vi~~ 104 (190)
+++++++|+||+|.+|+.+++.|++. +++|+++.|+.+........+...........|..+. ...++|+||++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 46799999999999999999999998 7899999886544333222221111233344455443 34579999997
Q ss_pred cC
Q 029640 105 AC 106 (190)
Q Consensus 105 ag 106 (190)
..
T Consensus 105 t~ 106 (194)
T cd01078 105 GA 106 (194)
T ss_pred CC
Confidence 64
No 311
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.04 E-value=1.8e-05 Score=65.39 Aligned_cols=69 Identities=23% Similarity=0.261 Sum_probs=51.2
Q ss_pred cCCCEEEEEcc----------------cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc
Q 029640 30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93 (190)
Q Consensus 30 ~~~~~vlItG~----------------~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 93 (190)
+.+++++|||| +|.+|.++++.|..+ |++|+++.+...... ...+ ..+|+.+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~-Ga~V~~v~~~~~~~~--------~~~~--~~~dv~~~ 254 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR-GADVTLVSGPVNLPT--------PAGV--KRIDVESA 254 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC-CCEEEEeCCCccccC--------CCCc--EEEccCCH
Confidence 58899999999 899999999999999 899999887542110 1122 23566653
Q ss_pred ---------ccCCcCEEEEccCCCC
Q 029640 94 ---------LLIEVDQIYHLACPAS 109 (190)
Q Consensus 94 ---------~~~~~d~vi~~ag~~~ 109 (190)
.+.++|++||+||+..
T Consensus 255 ~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 255 QEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHHhcCCCCEEEEcccccc
Confidence 2346999999999755
No 312
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=98.02 E-value=0.00015 Score=58.11 Aligned_cols=112 Identities=14% Similarity=0.082 Sum_probs=73.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCC--CCChhhhhhhhc----C-CceEEEe-ccccccccCCcCEEEE
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF--TGSKDNLRKWIG----H-PRFELIR-HDVTEPLLIEVDQIYH 103 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~--~~~~~~~~~~~~----~-~~~~~~~-~D~~~~~~~~~d~vi~ 103 (190)
|+|.|+|++|.+|..++..|+..+. .+|.+++|.. +.......++.+ . ....... .| ...+.+.|+||-
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d--~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD--LSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC--HHHhCCCCEEEE
Confidence 6899999999999999999999832 2588888843 222222111111 1 1122211 23 234678999999
Q ss_pred ccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC--CeEEEEecc
Q 029640 104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTS 148 (190)
Q Consensus 104 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~i~vSS~ 148 (190)
++|.... ...+..+.+..|......+++...+.. .++|.+++.
T Consensus 79 tag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np 123 (309)
T cd05294 79 TAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP 123 (309)
T ss_pred ecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 9985432 223446778889999999988887764 377777773
No 313
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.02 E-value=2.7e-05 Score=63.63 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=52.8
Q ss_pred CCCEEEEEcccchHHHH--HHHHHHhcCCCeEEEEcCCCCCCh-----------hhhhhhhc--CCceEEEeccccccc-
Q 029640 31 SNMRILVTGGAGFIGSH--LVDKLMENEKNEVIVVDNYFTGSK-----------DNLRKWIG--HPRFELIRHDVTEPL- 94 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~--l~~~L~~~~~~~v~~~~r~~~~~~-----------~~~~~~~~--~~~~~~~~~D~~~~~- 94 (190)
.+|+++|||+++.+|.+ +++.| .. |..++++.+..+... ..+..... ...+..+.+|+.+.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~-GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA-GADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc-CCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 46899999999999999 89999 77 787777764321111 11222211 224677899999863
Q ss_pred -----------cCCcCEEEEccCCC
Q 029640 95 -----------LIEVDQIYHLACPA 108 (190)
Q Consensus 95 -----------~~~~d~vi~~ag~~ 108 (190)
+.++|+|||++|..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 23599999999865
No 314
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.99 E-value=9.8e-06 Score=65.38 Aligned_cols=74 Identities=22% Similarity=0.245 Sum_probs=49.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
+.+++|+||||+|+||+.+++.|+.+.+ ..++++.|+.........++ .... . .|+ +..+.++|+|||+++..
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el-~~~~--i--~~l-~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL-GGGK--I--LSL-EEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh-cccc--H--HhH-HHHHccCCEEEECCcCC
Confidence 5789999999999999999999986523 68888888644332221111 1111 1 121 23456799999999864
Q ss_pred C
Q 029640 109 S 109 (190)
Q Consensus 109 ~ 109 (190)
.
T Consensus 227 ~ 227 (340)
T PRK14982 227 K 227 (340)
T ss_pred c
Confidence 4
No 315
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.99 E-value=2.1e-05 Score=55.32 Aligned_cols=78 Identities=21% Similarity=0.217 Sum_probs=55.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
+++++++|.| +|..|+.++..|...+-.+|+++.|+.+........+ ....+.....+-......++|+||++.+...
T Consensus 10 l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~-~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 10 LKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEF-GGVNIEAIPLEDLEEALQEADIVINATPSGM 87 (135)
T ss_dssp GTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH-TGCSEEEEEGGGHCHHHHTESEEEE-SSTTS
T ss_pred cCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc-CccccceeeHHHHHHHHhhCCeEEEecCCCC
Confidence 4789999999 5889999999999994456999999655444333333 3345666665544445678999999986543
No 316
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.98 E-value=0.00014 Score=58.64 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=70.3
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCC------eEEEEcCCCCC--ChhhhhhhhcCC--c-eEEEeccccccccCCcCEEE
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFTG--SKDNLRKWIGHP--R-FELIRHDVTEPLLIEVDQIY 102 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~------~v~~~~r~~~~--~~~~~~~~~~~~--~-~~~~~~D~~~~~~~~~d~vi 102 (190)
+|.|+|++|.+|..++..|+..+-. ++.++++.... ......++.+.. . ......+-..+++.++|+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 5899999999999999999986322 58888875432 111111111110 0 00111111124556799999
Q ss_pred EccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C--eEEEEec
Q 029640 103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTST 147 (190)
Q Consensus 103 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~i~vSS 147 (190)
+.||.... ..++..+.+..|+.-...+.+...++. . .+|.+|.
T Consensus 81 itAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 81 LVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred EcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 99986432 223467788999999999999888873 3 5666665
No 317
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.94 E-value=0.00016 Score=57.90 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=75.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhc-----CCceEEEeccccccccCCcCEEEEccC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
++|.|.| +|.+|+.++..|+..+. +++.+++++.+.......++.+ .........|. ....++|+||+++|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~--~~l~~aDIVIitag 77 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDY--SDCKDADIVVITAG 77 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCH--HHhCCCCEEEEccC
Confidence 4799999 59999999999999832 5899999976655433333311 11222222222 34578999999998
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.... ..++..+.++.|..-...+.+.+++++- .+|.+|.
T Consensus 78 ~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 78 APQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 5432 2345667889999999999988887753 6666665
No 318
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.94 E-value=5.9e-05 Score=61.07 Aligned_cols=70 Identities=21% Similarity=0.250 Sum_probs=45.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCC---eEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
+++|+|.|++|++|+.+++.|.++ ++ ++..+.+....... +. + . .......|+.+....++|+||.++|.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~-~hp~~~l~~l~s~~~~g~~-l~-~-~--g~~i~v~d~~~~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEER-NFPVDKLRLLASARSAGKE-LS-F-K--GKELKVEDLTTFDFSGVDIALFSAGG 73 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCcceEEEEEccccCCCe-ee-e-C--CceeEEeeCCHHHHcCCCEEEECCCh
Confidence 478999999999999999999996 44 44555554322211 11 1 1 12333345554445689999999863
No 319
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.93 E-value=5.8e-05 Score=58.76 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=56.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc-------cCCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------~~~~d~vi~~a 105 (190)
|+|+|+||||. |+.+++.|.+. |++|++..+........ . ......+..+..+.. ..++|+||+++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~-~----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt 73 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLY-P----IHQALTVHTGALDPQELREFLKRHSIDILVDAT 73 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccc-c----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence 57999999999 99999999998 79999988866543221 1 111122233333321 23699999998
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEE
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i 143 (190)
.+.. ...+.++.++|++.++.++
T Consensus 74 HPfA---------------~~is~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 74 HPFA---------------AQITTNATAVCKELGIPYV 96 (256)
T ss_pred CHHH---------------HHHHHHHHHHHHHhCCcEE
Confidence 5322 1224566667766665333
No 320
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.91 E-value=0.00034 Score=56.18 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=77.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC----CceEEEeccccccccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
.+++|.|+|+ |.+|..++..|+..+- .++.+++++.+.......++.+. ..+.....|. +++.+.|+||..|
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~--~~~~~adivIita 81 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDY--SDCKDADLVVITA 81 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCH--HHhCCCCEEEEec
Confidence 3579999996 9999999999998843 37999988766554444333221 1333332222 3567899999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
|.... ..++..+.++.|..-...+++.+++++. .+|.+|-
T Consensus 82 g~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 82 GAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 86432 2345667889999999998888877653 6666664
No 321
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.89 E-value=0.00013 Score=59.48 Aligned_cols=99 Identities=12% Similarity=0.196 Sum_probs=57.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC----------CceEEEeccccccccCCcCE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----------PRFELIRHDVTEPLLIEVDQ 100 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~d~ 100 (190)
++++|.|+||+|++|+.+++.|..+...++..+.++.......+....+. ..+.+...|. +...++|+
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~Dv 79 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDP--EAVDDVDI 79 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCH--HHhcCCCE
Confidence 45899999999999999999999885557777734322222111111000 0111111121 22347899
Q ss_pred EEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 101 vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
||.+.... ....+++.+.+.++++|-.|+..
T Consensus 80 Vf~a~p~~------------------~s~~~~~~~~~~G~~vIDls~~f 110 (349)
T PRK08664 80 VFSALPSD------------------VAGEVEEEFAKAGKPVFSNASAH 110 (349)
T ss_pred EEEeCChh------------------HHHHHHHHHHHCCCEEEECCchh
Confidence 98876321 02345566667788777777644
No 322
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.83 E-value=0.00014 Score=59.07 Aligned_cols=99 Identities=14% Similarity=0.224 Sum_probs=59.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CC---ceEEEeccccccccCCcCEEEEccCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
+++|+|.|++|++|+.+++.|.++.+.++..+.++.... ..+....+ .. ...+...| +....++|+||.|...
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g-~~l~~~~~~~~~~~~~~~~~~~--~~~~~~vD~Vf~alP~ 78 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAG-KPLSDVHPHLRGLVDLVLEPLD--PEILAGADVVFLALPH 78 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccC-cchHHhCcccccccCceeecCC--HHHhcCCCEEEECCCc
Confidence 479999999999999999999988667776655532221 11111111 00 11122122 1234569999988742
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
. ....++..+.+.++++|=.|+..-+
T Consensus 79 ~------------------~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 79 G------------------VSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred H------------------HHHHHHHHHHhCCCEEEECCcccCC
Confidence 1 1234555666677788877775544
No 323
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.82 E-value=2.9e-05 Score=62.14 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=58.2
Q ss_pred EEEEEcccchHHHHHHHHHHhc---CCCeEEEEcCCCCCChhhhhhhhcC-----CceEEEecccccccc-----CCcCE
Q 029640 34 RILVTGGAGFIGSHLVDKLMEN---EKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLL-----IEVDQ 100 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~---~~~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~-----~~~d~ 100 (190)
.++|.||+||.|..+++.+++. .+...-+..|+.++..+.+.....+ ....++.+|..|++. .++.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 4899999999999999999993 2667888889887777666655332 233378899988754 46999
Q ss_pred EEEccCCCC
Q 029640 101 IYHLACPAS 109 (190)
Q Consensus 101 vi~~ag~~~ 109 (190)
|+||+|+..
T Consensus 87 ivN~vGPyR 95 (423)
T KOG2733|consen 87 IVNCVGPYR 95 (423)
T ss_pred EEeccccce
Confidence 999998654
No 324
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.79 E-value=0.00015 Score=59.02 Aligned_cols=99 Identities=13% Similarity=0.212 Sum_probs=58.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEE-cCCCCCChhhhhhhhcC--C--ceEEEeccccccccCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIGH--P--RFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~-~r~~~~~~~~~~~~~~~--~--~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
++|.|.|+||++|+.+++.|.++...++..+ .++... ...+....+. . ...+...|..+ ...++|+||.|.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVSEVHPHLRGLVDLNLEPIDEEE-IAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChHHhCccccccCCceeecCCHHH-hhcCCCEEEECCCc
Confidence 5799999999999999999998866777733 433211 1111111110 0 11222222211 12379999998842
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
. ....++..+.+.++++|=.|+..=+
T Consensus 79 ~------------------~s~~~~~~~~~~G~~VIDlS~~fR~ 104 (346)
T TIGR01850 79 G------------------VSAELAPELLAAGVKVIDLSADFRL 104 (346)
T ss_pred h------------------HHHHHHHHHHhCCCEEEeCChhhhc
Confidence 1 1345666666678889988886533
No 325
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.78 E-value=0.00066 Score=54.38 Aligned_cols=112 Identities=16% Similarity=0.032 Sum_probs=74.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC-CceEEEecccc---ccccCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVT---EPLLIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~---~~~~~~~d~vi~~ag~ 107 (190)
|+|.|+|++|.+|..++..|+.++- .++.+++.+ ...-...++.+. .........-. -+++.+.|+||-+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~ 78 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV 78 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence 5899999999999999999988733 478888775 222222222222 11122211111 2456789999999986
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS 148 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS~ 148 (190)
.. ...+...+.++.|..-...+.+..++++- .+|.+|..
T Consensus 79 ~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNP 119 (310)
T cd01337 79 PR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNP 119 (310)
T ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 43 22345677899999999999988887763 67777653
No 326
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.76 E-value=6.6e-05 Score=57.48 Aligned_cols=83 Identities=14% Similarity=0.164 Sum_probs=48.9
Q ss_pred EE-cccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc------------ccCCcCEEEE
Q 029640 37 VT-GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------------LLIEVDQIYH 103 (190)
Q Consensus 37 It-G~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~~d~vi~ 103 (190)
|| .++|+||+++++.|+++ |++|.++.+..... . . ....+|+.+. .+.++|++||
T Consensus 19 itN~SSGgIG~AIA~~la~~-Ga~Vvlv~~~~~l~-----~---~---~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVn 86 (227)
T TIGR02114 19 ITNHSTGHLGKIITETFLSA-GHEVTLVTTKRALK-----P---E---PHPNLSIREIETTKDLLITLKELVQEHDILIH 86 (227)
T ss_pred ecCCcccHHHHHHHHHHHHC-CCEEEEEcChhhcc-----c---c---cCCcceeecHHHHHHHHHHHHHHcCCCCEEEE
Confidence 44 45899999999999999 89998887531110 0 0 0123455542 1235999999
Q ss_pred ccCCCCCcc-cccCchhHHHHHHHHHHHH
Q 029640 104 LACPASPIF-YKYNPVKTIKTNVIGTLNM 131 (190)
Q Consensus 104 ~ag~~~~~~-~~~~~~~~~~~n~~~~~~l 131 (190)
|||...... ...+.+++.+++..++..+
T Consensus 87 nAgv~d~~~~~~~s~e~~~~~~~~~~~~~ 115 (227)
T TIGR02114 87 SMAVSDYTPVYMTDLEQVQASDNLNEFLS 115 (227)
T ss_pred CCEeccccchhhCCHHHHhhhcchhhhhc
Confidence 999654321 2223344444444444333
No 327
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.71 E-value=0.00088 Score=53.99 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=73.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-C-----eEEEEcCCCCC--ChhhhhhhhcC-----CceEEEeccccccccCCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~-----~v~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~d 99 (190)
++|.|+|++|.+|..++..|+..+- . ++.+++..... ......++.+. ..+..... ...++.+.|
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~--~~~~~~daD 80 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDD--PNVAFKDAD 80 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecC--cHHHhCCCC
Confidence 6899999999999999999998733 3 68888774332 22222222111 12222211 124567899
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC--C-eEEEEec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--A-RILLTST 147 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~i~vSS 147 (190)
+||.+||.... ..++..+.+..|..-...+.....++. - .+|.+|.
T Consensus 81 ivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (322)
T cd01338 81 WALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN 129 (322)
T ss_pred EEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 99999986432 234566789999999999998887765 2 6777765
No 328
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.71 E-value=0.00069 Score=54.03 Aligned_cols=112 Identities=15% Similarity=0.084 Sum_probs=74.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCCCCChhhhhhhhcCC----ceEEEeccccccccCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHP----RFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
++|.|+|+ |.||+.++..|+.+.-. ++.+++...+...-...++.+.. .-..+..|-...++.+.|+|+-.||.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~ 79 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGV 79 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCC
Confidence 57999998 99999999999887434 88898887444433322222111 11122222223456789999999985
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.. ...+...+.+..|..-...+.+...+..- .++.++-
T Consensus 80 pr--KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtN 119 (313)
T COG0039 80 PR--KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTN 119 (313)
T ss_pred CC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecC
Confidence 43 23356677889999999999888877764 5555554
No 329
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.66 E-value=0.00023 Score=57.58 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=56.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcC--CCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
.+++|.|+|+||++|..+++.|.+++ ..++..+... ......+. +. ...+.+...| ...+.++|+||.+.+..
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~-~~-~~~l~~~~~~--~~~~~~vD~vFla~p~~ 77 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP-FA-GKNLRVREVD--SFDFSQVQLAFFAAGAA 77 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec-cC-CcceEEeeCC--hHHhcCCCEEEEcCCHH
Confidence 34789999999999999999999752 2233344332 11111111 11 1122332222 22346799999987421
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEeccee
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 150 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~ 150 (190)
. ...++..+.+.++++|=.|+..=
T Consensus 78 ~------------------s~~~v~~~~~~G~~VIDlS~~fR 101 (336)
T PRK05671 78 V------------------SRSFAEKARAAGCSVIDLSGALP 101 (336)
T ss_pred H------------------HHHHHHHHHHCCCeEEECchhhc
Confidence 0 23366677777888887777654
No 330
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.65 E-value=0.0006 Score=55.32 Aligned_cols=105 Identities=22% Similarity=0.283 Sum_probs=68.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh------------------------hhhhhhhcCCceEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------------------------DNLRKWIGHPRFEL 85 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~------------------------~~~~~~~~~~~~~~ 85 (190)
+.+++|+|.| .|.+|..+++.|+..|-.++.+++++.-... ..+..+-+..++..
T Consensus 22 L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 4678999999 6889999999999994358888887641110 11222223345666
Q ss_pred Eecccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 86 IRHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 86 ~~~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
+..|+... ...++|+||.+.. +.+. -..+-+.|.+.++.+|+.+..+.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~D---------~~~~--------r~~in~~~~~~~ip~i~~~~~g~~G 154 (338)
T PRK12475 101 VVTDVTVEELEELVKEVDLIIDATD---------NFDT--------RLLINDLSQKYNIPWIYGGCVGSYG 154 (338)
T ss_pred EeccCCHHHHHHHhcCCCEEEEcCC---------CHHH--------HHHHHHHHHHcCCCEEEEEecccEE
Confidence 66666532 2356899988862 1111 1235577888888999888766555
No 331
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.63 E-value=0.00064 Score=57.09 Aligned_cols=76 Identities=18% Similarity=0.115 Sum_probs=49.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC-CcCEEEEccCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-EVDQIYHLACPAS 109 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~d~vi~~ag~~~ 109 (190)
.+++++|+|++| +|...++.|++. |+.|.+.++...........+. ..++.+........... ++|.||+++|+..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~-G~~V~~~d~~~~~~~~~~~~l~-~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~~ 80 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKL-GANVTVNDGKPFSENPEAQELL-EEGIKVICGSHPLELLDEDFDLMVKNPGIPY 80 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHC-CCEEEEEcCCCccchhHHHHHH-hcCCEEEeCCCCHHHhcCcCCEEEECCCCCC
Confidence 578999999877 999999999999 8999999876533322222222 22344443222111122 3899999998653
No 332
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.62 E-value=0.00042 Score=47.98 Aligned_cols=95 Identities=21% Similarity=0.325 Sum_probs=54.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEE-EcCCC-CCChhhhhhhhcC--CceEEEeccccccccCCcCEEEEccCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYF-TGSKDNLRKWIGH--PRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~-~~r~~-~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
++|.|.|.+|-+|+.+++.+.++.+.++.. +.|+. +.....+..+.+. ..+... -|+ +..+..+|++|.+..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-~~l-~~~~~~~DVvIDfT~-- 76 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-DDL-EELLEEADVVIDFTN-- 76 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-S-H-HHHTTH-SEEEEES---
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc-hhH-HHhcccCCEEEEcCC--
Confidence 579999999999999999999975766544 45543 1222222222211 112221 222 233445999999862
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS 147 (190)
-..+...++.|.++++.+|.-.|
T Consensus 77 ----------------p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 77 ----------------PDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp ----------------HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred ----------------hHHhHHHHHHHHhCCCCEEEECC
Confidence 12245678888888877764443
No 333
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.61 E-value=0.00055 Score=55.63 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=56.8
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCC---eEEEE-cCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKN---EVIVV-DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~---~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
..++|.|.|++|++|..+++.|.++ ++ ++..+ +++.....-.. . .......++....+.++|+||.+++
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~-~hP~~~l~~las~rsaGk~~~~-----~-~~~~~v~~~~~~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDR-DFPYSSLKMLASARSAGKKVTF-----E-GRDYTVEELTEDSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhC-CCCcceEEEEEccCCCCCeeee-----c-CceeEEEeCCHHHHcCCCEEEECCC
Confidence 4478999999999999999999986 33 33333 22222211111 1 1122222333344567999999885
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
... ...+...+.+.++++|=.|+..=+.
T Consensus 79 ~~~------------------s~~~~~~~~~~g~~VIDlS~~fR~~ 106 (344)
T PLN02383 79 GSI------------------SKKFGPIAVDKGAVVVDNSSAFRME 106 (344)
T ss_pred cHH------------------HHHHHHHHHhCCCEEEECCchhhcC
Confidence 321 2334445555677888777755433
No 334
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.56 E-value=0.00027 Score=56.13 Aligned_cols=76 Identities=11% Similarity=0.093 Sum_probs=50.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCC---CCChhhhhhhhc-CCceEEEeccccccc-----cCCcCE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF---TGSKDNLRKWIG-HPRFELIRHDVTEPL-----LIEVDQ 100 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~-----~~~~d~ 100 (190)
++++++|+|+ |.+|++++..|++. |. +|.++.|+. +...+....+.. ...+....+|+.+.. ....|+
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 5789999997 89999999999999 55 599999875 222222222211 123344556766532 245799
Q ss_pred EEEccCCC
Q 029640 101 IYHLACPA 108 (190)
Q Consensus 101 vi~~ag~~ 108 (190)
|||+-...
T Consensus 203 lINaTp~G 210 (289)
T PRK12548 203 LVNATLVG 210 (289)
T ss_pred EEEeCCCC
Confidence 99987543
No 335
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.54 E-value=0.002 Score=53.98 Aligned_cols=111 Identities=9% Similarity=0.057 Sum_probs=78.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhc-------CC-CeEEEEcCCCCCChhhhhhhhcCC-----ceEEEeccccccccCCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMEN-------EK-NEVIVVDNYFTGSKDNLRKWIGHP-----RFELIRHDVTEPLLIEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~-------~~-~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~d 99 (190)
-+|.|+|++|.+|.+++..|+.. +- .++.+++++.+...-...++.+.. .+.+... ..+++.+.|
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~--~ye~~kdaD 178 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID--PYEVFQDAE 178 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC--CHHHhCcCC
Confidence 68999999999999999999887 32 368888887766654444443221 2221111 124567899
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHH-cC--CeEEEEec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR-VG--ARILLTST 147 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~--~~~i~vSS 147 (190)
+||-.||... ...++..+.++.|..-...+.+...+ .+ .++|.+|.
T Consensus 179 iVVitAG~pr--kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 179 WALLIGAKPR--GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred EEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 9999998643 22345677899999999999999888 44 36777775
No 336
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.54 E-value=0.00069 Score=55.06 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=56.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-------CceE-EEeccccccccCCcCEEEEc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-------PRFE-LIRHDVTEPLLIEVDQIYHL 104 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-------~~~~-~~~~D~~~~~~~~~d~vi~~ 104 (190)
++|.|+|++|++|+++++.|..+...++..+..+.......+....+. ..+. ...-++......++|+||.+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a 80 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSA 80 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEe
Confidence 479999999999999999998874457666633221111111111100 0011 01112222233578999988
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
..... ...+...+.+.++++|..|+..=+
T Consensus 81 ~p~~~------------------s~~~~~~~~~~G~~VIDlsg~fR~ 109 (341)
T TIGR00978 81 LPSEV------------------AEEVEPKLAEAGKPVFSNASNHRM 109 (341)
T ss_pred CCHHH------------------HHHHHHHHHHCCCEEEECChhhcc
Confidence 74211 123445666678888888876533
No 337
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00056 Score=54.89 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=59.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC----CceEEEeccccccccCCcCEEEEccCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
+++|.|.|++|+.|..|++.|..+...++.....+.. ....+.....+ ....+...|.......++|+||.+.-.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlalPh 80 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-AGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLALPH 80 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-cCCchHHhCcccccccccccccCChhhhhcccCCEEEEecCc
Confidence 5789999999999999999999996666555544331 11122222111 112233333333344569999988632
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
.. ...++......++++|=.|..+
T Consensus 81 g~------------------s~~~v~~l~~~g~~VIDLSadf 104 (349)
T COG0002 81 GV------------------SAELVPELLEAGCKVIDLSADF 104 (349)
T ss_pred hh------------------HHHHHHHHHhCCCeEEECCccc
Confidence 11 2345555555677888888755
No 338
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.50 E-value=0.0027 Score=51.17 Aligned_cols=111 Identities=16% Similarity=0.103 Sum_probs=72.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-C-----eEEEEcCCCCC--ChhhhhhhhcCC-----ceEEEeccccccccCCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKDNLRKWIGHP-----RFELIRHDVTEPLLIEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~-----~v~~~~r~~~~--~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~d 99 (190)
.+|.|+|++|.+|..++..|+..+- . ++.+++..... ..-...++.+.. .+... .+ ...++.++|
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~-~~~~~~daD 81 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-TD-PEEAFKDVD 81 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-cC-hHHHhCCCC
Confidence 5799999999999999999998732 3 68888775422 232222222111 12111 11 124566899
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC--C-eEEEEec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--A-RILLTST 147 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~i~vSS 147 (190)
+||..||... ...++..+.+..|..-...+.+.++++. . .+|.+|.
T Consensus 82 vVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 130 (323)
T TIGR01759 82 AALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN 130 (323)
T ss_pred EEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 9999998643 2335667789999999999998887764 3 5666654
No 339
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.49 E-value=6.4e-05 Score=61.98 Aligned_cols=70 Identities=20% Similarity=0.269 Sum_probs=48.1
Q ss_pred cCCCEEEEEcc----------------cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc
Q 029640 30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93 (190)
Q Consensus 30 ~~~~~vlItG~----------------~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 93 (190)
+++++++|||| +|.+|.++++.|..+ |++|+++.+...... ...+. ..|+.+.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~-Ga~V~~~~g~~~~~~--------~~~~~--~~~v~~~ 251 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR-GADVTLITGPVSLLT--------PPGVK--SIKVSTA 251 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC-CCEEEEeCCCCccCC--------CCCcE--EEEeccH
Confidence 57899999998 367999999999999 899988876433211 11222 2233321
Q ss_pred ----------ccCCcCEEEEccCCCCC
Q 029640 94 ----------LLIEVDQIYHLACPASP 110 (190)
Q Consensus 94 ----------~~~~~d~vi~~ag~~~~ 110 (190)
...++|++|++||+.+.
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEccccccc
Confidence 12358999999997653
No 340
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=97.48 E-value=0.0018 Score=53.31 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=73.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCe----EEE----EcCCCCCChhhhhhhhcC-----CceEEEeccccccccCCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNE----VIV----VDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~----v~~----~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~d 99 (190)
-+|.|+|++|.+|..++..|+..+-.. +.+ ++++.+.......++.+. ..+.....| ..++.+.|
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~--y~~~kdaD 122 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP--YEVFEDAD 122 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC--HHHhCCCC
Confidence 689999999999999999999884322 333 355555444333333221 122222111 24567899
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC---CeEEEEec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST 147 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~i~vSS 147 (190)
+||..||... ...++..+.+..|..-...+.+...++. .++|.+|.
T Consensus 123 IVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 123 WALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred EEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 9999998643 2334567789999999999999888743 36777775
No 341
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.47 E-value=0.0016 Score=52.92 Aligned_cols=106 Identities=24% Similarity=0.286 Sum_probs=68.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh------------------------hhhhhhhcCCceEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------------------------DNLRKWIGHPRFEL 85 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~------------------------~~~~~~~~~~~~~~ 85 (190)
+...+|+|.| .|.+|..+++.|+..|-.++.+++++.-... ..+..+-+...+..
T Consensus 22 L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 3668999999 6999999999999994458888887531110 11111112234555
Q ss_pred Eecccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCC
Q 029640 86 IRHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153 (190)
Q Consensus 86 ~~~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~ 153 (190)
+..+++.. .+.+.|+||.+.. ++ ..-..+-++|.+.++.+|+.++.+.||.
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~D---------n~--------~~r~~ln~~~~~~~iP~i~~~~~g~~G~ 155 (339)
T PRK07688 101 IVQDVTAEELEELVTGVDLIIDATD---------NF--------ETRFIVNDAAQKYGIPWIYGACVGSYGL 155 (339)
T ss_pred EeccCCHHHHHHHHcCCCEEEEcCC---------CH--------HHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence 55555432 2356899988852 11 1123466788888889999888776663
No 342
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.46 E-value=0.0017 Score=45.46 Aligned_cols=103 Identities=21% Similarity=0.344 Sum_probs=64.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEecc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHD 89 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D 89 (190)
.++|+|.| .|.+|..+++.|+..|-.++.+++...-...+. +..+.+..++..+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 47899999 899999999999999445788876653222111 1111122455666666
Q ss_pred cccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 90 VTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 90 ~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
+... .+.++|+||.+... ...-..+.+.|+++++++|..+..+.+|
T Consensus 81 ~~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 IDEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp CSHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred cccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 6322 23479999998631 1112356778999998998888755444
No 343
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=97.45 E-value=0.00041 Score=52.61 Aligned_cols=106 Identities=19% Similarity=0.241 Sum_probs=76.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEE-----EeccccccccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL-----IRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-----~~~D~~~~~~~~~d~vi~~a 105 (190)
+-...++.|+.||.|+++++..... ++.|..+.|+.. ++.+..+. ..+.| +..|+.+....++.-++-++
T Consensus 51 e~e~tlvlggnpfsgs~vlk~A~~v-v~svgilsen~~--k~~l~sw~--~~vswh~gnsfssn~~k~~l~g~t~v~e~~ 125 (283)
T KOG4288|consen 51 EVEWTLVLGGNPFSGSEVLKNATNV-VHSVGILSENEN--KQTLSSWP--TYVSWHRGNSFSSNPNKLKLSGPTFVYEMM 125 (283)
T ss_pred hHHHHhhhcCCCcchHHHHHHHHhh-ceeeeEeecccC--cchhhCCC--cccchhhccccccCcchhhhcCCcccHHHh
Confidence 3356889999999999999999999 899988888644 22233332 23444 44455556666788888887
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC-eEEEEec
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~i~vSS 147 (190)
|... +...+..+|-....+..+++++.++ +++|+|.
T Consensus 126 ggfg------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa 162 (283)
T KOG4288|consen 126 GGFG------NIILMDRINGTANINAVKAAAKAGVPRFVYISA 162 (283)
T ss_pred cCcc------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEh
Confidence 6432 4455667788888888999999998 8999996
No 344
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.45 E-value=0.0037 Score=49.99 Aligned_cols=111 Identities=13% Similarity=0.071 Sum_probs=69.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-----CceEEEe-ccccccccCCcCEEEEcc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIR-HDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~-~D~~~~~~~~~d~vi~~a 105 (190)
+++|.|+|+ |.+|..++..++..+..+|.+++++.+.......++... ....... .|. .++.+.|+||.++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~ 78 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA 78 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence 478999996 999999999999873128999988665443322222111 1112211 233 3467899999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
|... .......+.+..|+.....+++...+... .+|.++.
T Consensus 79 ~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 79 GVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 8543 22234455667788777777777766542 4555554
No 345
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.45 E-value=0.0039 Score=49.96 Aligned_cols=110 Identities=15% Similarity=0.168 Sum_probs=71.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC----CceEEEeccccccccCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
|+|.|.|+ |.+|..++..|+.++. .++.+++++.........++.+. ........|. ....+.|+||.+++.
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~ 77 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA 77 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence 57999995 9999999999999832 68999998765443222222211 1122222333 346789999999985
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
... ...+..+.+..|......+++.+.+.+. .++.++.
T Consensus 78 ~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tN 117 (308)
T cd05292 78 NQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTN 117 (308)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 432 2334556778888888888887776653 4555543
No 346
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.44 E-value=0.0031 Score=50.64 Aligned_cols=110 Identities=16% Similarity=0.045 Sum_probs=71.7
Q ss_pred EEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCC-ceEEEe--cc-ccccccCCcCEEEEccCCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHP-RFELIR--HD-VTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~--~D-~~~~~~~~~d~vi~~ag~~ 108 (190)
||.|+|++|.+|..++..|+..+- .++.+++++. ..-...++.+.. ...... .| -..+++.+.|+||.+||..
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~ 78 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP 78 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence 588999999999999999988732 4788887755 221112222111 112221 11 1124677899999999864
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.. ......+.+..|..-...+.+...+++- .+|.+|.
T Consensus 79 ~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 79 RK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred CC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 32 2345667789999988888888877653 5666665
No 347
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.44 E-value=0.0021 Score=48.37 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=65.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh----------------------hhhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|.++++.|+..+-.++.+++.+.-...+ .+..+-+..++..+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 3678999999 89999999999999943688888776321111 111111222344443
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
..+... .+.++|+||.+... . ..-..+-+.|.++++.+|+.+..+.+|
T Consensus 98 ~~i~~~~~~~~~~~~D~Vi~~~d~---------~--------~~r~~l~~~~~~~~ip~i~~~~~g~~G 149 (202)
T TIGR02356 98 ERVTAENLELLINNVDLVLDCTDN---------F--------ATRYLINDACVALGTPLISAAVVGFGG 149 (202)
T ss_pred hcCCHHHHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence 344322 24568999888631 1 112346678888888898888655444
No 348
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.41 E-value=0.0013 Score=49.88 Aligned_cols=79 Identities=19% Similarity=0.114 Sum_probs=58.2
Q ss_pred ccCCCEEEEEccc--chHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEecccccccc----------
Q 029640 29 FQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLL---------- 95 (190)
Q Consensus 29 ~~~~~~vlItG~~--G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~---------- 95 (190)
+++||+++|+|-. ..|+..+++.|.++ |.++......+ .....+.++... .....+.||+.+++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~-GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQ-GAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHc-CCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 4689999999864 67999999999999 88888777654 334444444322 234568899998743
Q ss_pred --CCcCEEEEccCCCC
Q 029640 96 --IEVDQIYHLACPAS 109 (190)
Q Consensus 96 --~~~d~vi~~ag~~~ 109 (190)
.++|.|+|+.+...
T Consensus 81 ~~g~lD~lVHsIaFa~ 96 (259)
T COG0623 81 KWGKLDGLVHSIAFAP 96 (259)
T ss_pred hhCcccEEEEEeccCC
Confidence 35999999998654
No 349
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.41 E-value=0.00049 Score=55.85 Aligned_cols=68 Identities=13% Similarity=0.222 Sum_probs=42.8
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCe---EEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
+|+|.|++|++|+.+++.|.++ ++. +..+.+...... .+. + ........|+....+.++|+||.++|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~-~hp~~~l~~~as~~~~g~-~~~-~---~~~~~~~~~~~~~~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEER-NFPIDKLVLLASDRSAGR-KVT-F---KGKELEVNEAKIESFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhC-CCChhhEEEEeccccCCC-eee-e---CCeeEEEEeCChHHhcCCCEEEECCCH
Confidence 5899999999999999999886 444 333334322111 111 1 123444455554556789999999863
No 350
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.39 E-value=0.0053 Score=49.17 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=74.2
Q ss_pred EEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC------CceEEEeccccccccCCcCEEEEccC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH------PRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
||.|.|+ |.+|..++..|+.++- .++.+++...+.......++.+. ..+.....| -+++.+.|+||-.||
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--y~~~~~aDivvitaG 77 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--YDDCADADIIVITAG 77 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--HHHhCCCCEEEECCC
Confidence 5789996 9999999999998743 47888888655554443333221 133444333 245678999999998
Q ss_pred CCCCcccccC--chhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 107 PASPIFYKYN--PVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 107 ~~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.... ..+. ..+.++.|..-...+.+.+.+++- .+|.+|-
T Consensus 78 ~~~k--pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN 120 (307)
T cd05290 78 PSID--PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN 120 (307)
T ss_pred CCCC--CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 6432 1222 367789999999999988887763 5555555
No 351
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.39 E-value=0.0042 Score=49.87 Aligned_cols=111 Identities=13% Similarity=0.089 Sum_probs=73.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCC----ceEEEe-ccccccccCCcCEEEEcc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHP----RFELIR-HDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~-~D~~~~~~~~~d~vi~~a 105 (190)
.+||.|+|+ |.+|..++..|+..+- .++.+++.+.+.......++.+.. ...... .|. +++.+.|+||.+|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy--~~~~~adivvita 79 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY--SVTANSKVVIVTA 79 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH--HHhCCCCEEEECC
Confidence 368999995 9999999999988843 478888876654443333332211 112222 333 2467899999999
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
|.... ..+...+.+..|..-...+.+..++++- .+|.+|.
T Consensus 80 G~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 80 GARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 86432 2345667788899988888888877752 5666664
No 352
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=97.39 E-value=0.0033 Score=49.74 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=70.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh----------------------hhhhhhcCCceEEEec
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRH 88 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~ 88 (190)
...+|+|.| .|.+|.++++.|+..|-..+.+++...-...+ .+.++-+..+++.+..
T Consensus 18 ~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~ 96 (286)
T cd01491 18 QKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTG 96 (286)
T ss_pred hcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 568899999 89999999999999954678887655322211 1122222345666655
Q ss_pred cccccccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCC
Q 029640 89 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153 (190)
Q Consensus 89 D~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~ 153 (190)
++..+.+.++|+||.+.. +.+ ....+-++|+++++.+|...+.+.+|.
T Consensus 97 ~~~~~~l~~fdvVV~~~~---------~~~--------~~~~in~~c~~~~ipfI~a~~~G~~G~ 144 (286)
T cd01491 97 PLTTDELLKFQVVVLTDA---------SLE--------DQLKINEFCHSPGIKFISADTRGLFGS 144 (286)
T ss_pred cCCHHHHhcCCEEEEecC---------CHH--------HHHHHHHHHHHcCCEEEEEeccccEEE
Confidence 555555678999888752 111 123456788888889999988776663
No 353
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.38 E-value=0.0045 Score=43.71 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=62.8
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEecccc
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHDVT 91 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D~~ 91 (190)
+|+|.| .|.+|.++++.|+..+-.++.+++...-...+. +..+.+..++..+..++.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 488999 699999999999999445788886552211111 111112234444444444
Q ss_pred cc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 92 EP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 92 ~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
.. .+.++|+||.+... ......+.+.|+++++.+|.+++.+.+
T Consensus 80 ~~~~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i~~i~~~~~g~~ 126 (143)
T cd01483 80 EDNLDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGIPVIDAGGLGLG 126 (143)
T ss_pred hhhHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEcCCCcE
Confidence 32 24579999988731 112345778899998889988875533
No 354
>PRK05442 malate dehydrogenase; Provisional
Probab=97.37 E-value=0.004 Score=50.30 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=73.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCC-C-----eEEEEcCCCCC--ChhhhhhhhcC-----CceEEEeccccccccCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKDNLRKWIGH-----PRFELIRHDVTEPLLIE 97 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~-~-----~v~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~ 97 (190)
+.++|.|+|++|.+|..++..|+..+- . ++.+++..... ......++.+. ..+.....| .+++.+
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--y~~~~d 80 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDP--NVAFKD 80 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecCh--HHHhCC
Confidence 347899999999999999999988632 2 68888774322 22111111111 122222111 245668
Q ss_pred cCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC--C-eEEEEec
Q 029640 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--A-RILLTST 147 (190)
Q Consensus 98 ~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~i~vSS 147 (190)
.|+||-+||... ...++..+.+..|..-...+.+...++. . .+|.+|.
T Consensus 81 aDiVVitaG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 81 ADVALLVGARPR--GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred CCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 999999998543 2234667789999999999998888743 2 6666665
No 355
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=97.36 E-value=0.0019 Score=52.26 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=58.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhc--CCCeEEEEcCC-CCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~--~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
..++|.|.||||++|..+++.|.++ ...++..+... ..... +. +. ...+.+. ++....+.++|++|.+++.
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~--~~-~~-~~~~~v~--~~~~~~~~~~Dvvf~a~p~ 76 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGET--LR-FG-GKSVTVQ--DAAEFDWSQAQLAFFVAGR 76 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCce--EE-EC-CcceEEE--eCchhhccCCCEEEECCCH
Confidence 4578999999999999999999994 34455555332 22211 11 11 1122222 4333334679999998852
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
.. ...++..+.+.++++|=.|+.+=+
T Consensus 77 ~~------------------s~~~~~~~~~~g~~VIDlS~~fRl 102 (336)
T PRK08040 77 EA------------------SAAYAEEATNAGCLVIDSSGLFAL 102 (336)
T ss_pred HH------------------HHHHHHHHHHCCCEEEECChHhcC
Confidence 21 234555666667788877775533
No 356
>PLN02602 lactate dehydrogenase
Probab=97.36 E-value=0.0059 Score=49.78 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=74.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC----CceEEEe-ccccccccCCcCEEEEccC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIR-HDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~-~D~~~~~~~~~d~vi~~ag 106 (190)
++|.|+| +|.+|..++..|+..+- .++.+++.+.+.......++.+. ....... .|. .++.+.|+||-+||
T Consensus 38 ~KI~IIG-aG~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy--~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVG-VGNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY--AVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH--HHhCCCCEEEECCC
Confidence 6999999 59999999999998843 47888888665544333333221 1122221 232 33678999999998
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.... ..++..+.+..|..-...+.+...+++- .+|.+|-
T Consensus 115 ~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 115 ARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6432 2345567788899888888888877653 5666664
No 357
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.34 E-value=0.00097 Score=49.43 Aligned_cols=70 Identities=24% Similarity=0.366 Sum_probs=42.2
Q ss_pred CCCEEEEEcc----------------cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc-
Q 029640 31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP- 93 (190)
Q Consensus 31 ~~~~vlItG~----------------~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~- 93 (190)
.|++|+||+| +|-.|.++++.+..+ |++|+++........ ...+..+..+-.++
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~-Ga~V~li~g~~~~~~--------p~~~~~i~v~sa~em 72 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARR-GAEVTLIHGPSSLPP--------PPGVKVIRVESAEEM 72 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHT-T-EEEEEE-TTS------------TTEEEEE-SSHHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHC-CCEEEEEecCccccc--------cccceEEEecchhhh
Confidence 5677777764 799999999999999 899988876532111 22555655433322
Q ss_pred ------ccCCcCEEEEccCCCC
Q 029640 94 ------LLIEVDQIYHLACPAS 109 (190)
Q Consensus 94 ------~~~~~d~vi~~ag~~~ 109 (190)
.+.+.|++|++|++.+
T Consensus 73 ~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 73 LEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHGGGGSEEEE-SB--S
T ss_pred hhhhccccCcceeEEEecchhh
Confidence 2346899999998765
No 358
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.30 E-value=0.0048 Score=46.27 Aligned_cols=106 Identities=15% Similarity=0.266 Sum_probs=65.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh------------------------hhhhhhcCCceEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------------------------NLRKWIGHPRFEL 85 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~------------------------~~~~~~~~~~~~~ 85 (190)
++..+|+|.| .|.+|.++++.|+..|-.++++++.+.-...+ .+.++-+..+++.
T Consensus 17 L~~s~VlviG-~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~ 95 (198)
T cd01485 17 LRSAKVLIIG-AGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI 95 (198)
T ss_pred HhhCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence 3668999999 55599999999999954678888655221111 0112222234555
Q ss_pred Eeccccc------cccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCC
Q 029640 86 IRHDVTE------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153 (190)
Q Consensus 86 ~~~D~~~------~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~ 153 (190)
+..++.+ ..+.++|+||.+-. + ......+-+.|+++++.+|+.++.+.||.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d---------~--------~~~~~~ln~~c~~~~ip~i~~~~~G~~G~ 152 (198)
T cd01485 96 VEEDSLSNDSNIEEYLQKFTLVIATEE---------N--------YERTAKVNDVCRKHHIPFISCATYGLIGY 152 (198)
T ss_pred EecccccchhhHHHHHhCCCEEEECCC---------C--------HHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence 4444431 12346888887642 1 11123466889999999999998776664
No 359
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.29 E-value=0.004 Score=52.85 Aligned_cols=76 Identities=20% Similarity=0.133 Sum_probs=50.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
..+++|+|+| .|.+|..+++.|.++ |.+|+++++++..............++.+...+-.. ....+|.||...|..
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGWR 89 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCcC
Confidence 4678999999 688999999999998 889999986543322222222222345554433222 345689999988854
No 360
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.28 E-value=0.0052 Score=46.01 Aligned_cols=106 Identities=16% Similarity=0.299 Sum_probs=65.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh----------------------hhhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~ 87 (190)
+.+.+|+|.| .|.+|.++++.|+..|-.++.+++...-...+ .+.++-+...++...
T Consensus 19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 3678999999 55599999999999944678887654221111 112222223444444
Q ss_pred ccccc---cccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCC
Q 029640 88 HDVTE---PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153 (190)
Q Consensus 88 ~D~~~---~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~ 153 (190)
..+.+ ..+.++|+||.+.. +.. ....+-+.|+++++.+|+.++.+.+|.
T Consensus 98 ~~~~~~~~~~~~~~dvVi~~~~---------~~~--------~~~~ln~~c~~~~ip~i~~~~~G~~G~ 149 (197)
T cd01492 98 DDISEKPEEFFSQFDVVVATEL---------SRA--------ELVKINELCRKLGVKFYATGVHGLFGF 149 (197)
T ss_pred cCccccHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence 33332 12357899887752 111 123455788999999999888776663
No 361
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=97.27 E-value=0.0045 Score=42.47 Aligned_cols=70 Identities=16% Similarity=0.316 Sum_probs=40.9
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEE-cCCCCCChhhhhhhhcCCceE-EE--eccccccccCCcCEEEEccC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIGHPRFE-LI--RHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~-~~--~~D~~~~~~~~~d~vi~~ag 106 (190)
++.|+|++|.+|..+++.|.+..+.++..+ .++ ........... +++. .. ..+..+....++|+||.+.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~DvV~~~~~ 74 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA-RSAGKRVSEAG--PHLKGEVVLELEPEDFEELAVDIVFLALP 74 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEech-hhcCcCHHHHC--cccccccccccccCChhhcCCCEEEEcCC
Confidence 478999999999999999999756677666 332 21112222211 1111 11 12222222347899988874
No 362
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.26 E-value=0.0011 Score=52.39 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=49.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
..+++++|+|+ |.+|+.++..|... + .+|+++.|+.+........+.....+.+ ..+. .....+.|+|||+....
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~-~~~~~~~DivInaTp~g 196 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL-QEELADFDLIINATSAG 196 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc-hhccccCCEEEECCcCC
Confidence 46789999994 99999999999998 6 7999999975544333222211111222 1121 13345789999998644
No 363
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.24 E-value=0.003 Score=47.50 Aligned_cols=71 Identities=14% Similarity=0.283 Sum_probs=52.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
+.+++|+|.| +|-+|...++.|++. |++|+++.+.. ...+..+.....+.+..-++....+.+.|+||-+.
T Consensus 8 l~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~---~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT 78 (202)
T PRK06718 8 LSNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPEL---TENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT 78 (202)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCC---CHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence 5789999999 699999999999999 78999887532 22233444445677766666666667888887765
No 364
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.24 E-value=0.0034 Score=48.98 Aligned_cols=32 Identities=22% Similarity=0.499 Sum_probs=26.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~ 64 (190)
++|.|+|++|.+|+.+++.+.+..+.++..+.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~ 33 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAV 33 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 68999999999999999998876456666543
No 365
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.23 E-value=0.0012 Score=51.85 Aligned_cols=74 Identities=18% Similarity=0.269 Sum_probs=49.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
.+++++|+|+ |.+|+.++..|++. +.+|.+..|+.+........+.....+... +..+....++|+||++.+..
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~~~~~~~DivInatp~g 189 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDELPLHRVDLIINATSAG 189 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhhhcccCccEEEECCCCC
Confidence 4689999996 89999999999998 789999988654433332222111222222 22223334689999998754
No 366
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.22 E-value=0.0054 Score=47.96 Aligned_cols=110 Identities=16% Similarity=0.094 Sum_probs=71.6
Q ss_pred EEEEcccchHHHHHHHHHHhcCC----CeEEEEcCCCCCChhhhhhhhc---CC-ceEEEeccccccccCCcCEEEEccC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEK----NEVIVVDNYFTGSKDNLRKWIG---HP-RFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~----~~v~~~~r~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
|.|+|++|.+|..++..|+.. + .++.+++++.+.......++.. .. .......+-..+++.+.|+||..+|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~-~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADG-SVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhC-CCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCC
Confidence 479999899999999999988 5 6899998876554433322211 11 1222222211355678999999998
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.... ...........|+.....+.+...+... .+|.+|-
T Consensus 80 ~~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tN 120 (263)
T cd00650 80 VGRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN 120 (263)
T ss_pred CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5432 2234445677788888888888877653 5666654
No 367
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.21 E-value=0.0066 Score=48.46 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=72.0
Q ss_pred EEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC----CceEEEe-ccccccccCCcCEEEEccCCC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIR-HDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~-~D~~~~~~~~~d~vi~~ag~~ 108 (190)
|.|.| +|.+|..++..|+..+- .++.+++++.+.......++.+. ....... .| ..++.++|+||.++|..
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~--~~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD--YADAADADIVVITAGAP 77 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC--HHHhCCCCEEEEcCCCC
Confidence 46888 58999999999998832 68999988765544333333211 1122222 22 24667899999999854
Q ss_pred CCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.. ..++..+.+..|+.-...+.+..+++.- .+|.+|.
T Consensus 78 ~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 78 RK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred CC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 32 2345567788899999989888877753 6666665
No 368
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=97.20 E-value=0.0023 Score=51.30 Aligned_cols=83 Identities=16% Similarity=0.206 Sum_probs=52.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCCCc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI 111 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~~ 111 (190)
+.+|.|.|++|++|..+++.|.++..-++..+..+... .. +..+....++|+||.+....
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------~~-----~~~~~~~~~~DvvFlalp~~--- 61 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------DA-----AARRELLNAADVAILCLPDD--- 61 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------cc-----cCchhhhcCCCEEEECCCHH---
Confidence 46899999999999999999999854455555432211 00 11112234689998887321
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
....+...+.+.++++|=.|+..
T Consensus 62 ---------------~s~~~~~~~~~~g~~VIDlSadf 84 (313)
T PRK11863 62 ---------------AAREAVALIDNPATRVIDASTAH 84 (313)
T ss_pred ---------------HHHHHHHHHHhCCCEEEECChhh
Confidence 02334455555677888788755
No 369
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.19 E-value=0.0041 Score=47.61 Aligned_cols=105 Identities=18% Similarity=0.180 Sum_probs=64.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+.+.+|+|.| .|.+|.++++.|+..|-.++.+++.+.-...+. +..+-+..++..+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 3668999999 899999999999999446777775542111111 11111123445554
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
.++... .+.++|+||.+... +. .-..+-+.|.++++.+|+.+..+.+|
T Consensus 98 ~~i~~~~~~~~~~~~DvVi~~~d~---------~~--------~r~~l~~~~~~~~ip~i~~g~~g~~g 149 (228)
T cd00757 98 ERLDAENAEELIAGYDLVLDCTDN---------FA--------TRYLINDACVKLGKPLVSGAVLGFEG 149 (228)
T ss_pred ceeCHHHHHHHHhCCCEEEEcCCC---------HH--------HHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 444321 23469999998731 11 12346678888888888887655433
No 370
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.19 E-value=0.0059 Score=48.90 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=70.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-----CceEEE-eccccccccCCcCEEEEccC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELI-RHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~D~~~~~~~~~d~vi~~ag 106 (190)
|+|.|.| +|++|..++..|+.++..+|.+++............+... ...... ..|.. +..++|+||-++|
T Consensus 2 ~KV~VIG-aG~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~--~~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIG-AGFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA--DTANSDIVVITAG 78 (305)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH--HhCCCCEEEEcCC
Confidence 6799999 5999999999999983237999888544333222212111 011121 23443 2567999999998
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
.... ...+..+.+..|......+++...++.- .+|.+|.
T Consensus 79 ~p~~--~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 79 LPRK--PGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5332 2234556778899988888888777653 5666665
No 371
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0063 Score=47.17 Aligned_cols=94 Identities=20% Similarity=0.257 Sum_probs=54.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCe-EEEEcCCCCCCh-hhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~-v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
+++|.|.|++|-.|+.+++.+.+..+.+ +-++.|...... ....++.....+.....|-.......+|++|.+-.+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV~IDFT~P~- 80 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTDDLLLVKADADVLIDFTTPE- 80 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeecchhhcccCCCEEEECCCch-
Confidence 5789999999999999999999986555 444555433221 1111111111111111121333456789999886421
Q ss_pred CcccccCchhHHHHHHHHHHHHHHHHHHcCCeEE
Q 029640 110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143 (190)
Q Consensus 110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i 143 (190)
++..+++.|.++++++|
T Consensus 81 -----------------~~~~~l~~~~~~~~~lV 97 (266)
T COG0289 81 -----------------ATLENLEFALEHGKPLV 97 (266)
T ss_pred -----------------hhHHHHHHHHHcCCCeE
Confidence 13456777777775554
No 372
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.17 E-value=0.0082 Score=48.38 Aligned_cols=112 Identities=11% Similarity=0.095 Sum_probs=70.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-----CceEEEe-ccccccccCCcCEEEEc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIR-HDVTEPLLIEVDQIYHL 104 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~-~D~~~~~~~~~d~vi~~ 104 (190)
..++|.|+|+ |.+|..++..|+..+-.++.+++++.+.......++... ....... .|. +++.+.|+||.+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~--~~l~~ADiVVit 80 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY--EDIKDSDVVVIT 80 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH--HHhCCCCEEEEC
Confidence 4579999995 999999999998883268888888665433221111111 1122221 232 256789999999
Q ss_pred cCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 105 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
+|.... ......+.+..|..-...+.+.+.+..- .+|++|.
T Consensus 81 ag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 81 AGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 986432 2234456677788777777777766642 4666654
No 373
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.17 E-value=0.0035 Score=50.90 Aligned_cols=97 Identities=14% Similarity=0.215 Sum_probs=57.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCe---EEEEc-CCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVD-NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~---v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
..++|.|.|+||++|+.+++.|.++.... +..+. ++.....- .+. ...+.+...|. ..+.++|++|.+++
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~---~~~-~~~l~v~~~~~--~~~~~~Divf~a~~ 77 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV---QFK-GREIIIQEAKI--NSFEGVDIAFFSAG 77 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe---eeC-CcceEEEeCCH--HHhcCCCEEEECCC
Confidence 34689999999999999999999764545 44443 22222211 111 11333333332 33467999999885
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
... ...+...+.+.++.+|=.||..=+
T Consensus 78 ~~~------------------s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 78 GEV------------------SRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred hHH------------------HHHHHHHHHHCCCEEEECchhhcC
Confidence 221 234555566667777777765544
No 374
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.16 E-value=0.019 Score=46.33 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=70.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-----CCceEEEe-ccccccccCCcCEEEEc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHL 104 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~D~~~~~~~~~d~vi~~ 104 (190)
+.++|.|+| +|.+|..++..++..+-.++.+++.+++.......++.. ........ .|. +++.+.|+||.+
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~t 81 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIVT 81 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEEC
Confidence 457899999 699999999999888335788888866543222111111 11223322 343 356789999999
Q ss_pred cCCCCCccc---ccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 105 ACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 105 ag~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
+|....... +.+..+.+..|..-...+.+.+.+..- .+|.+|.
T Consensus 82 ag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 82 AGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 986432111 013455677787777777777766542 5666655
No 375
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.13 E-value=0.011 Score=45.76 Aligned_cols=105 Identities=14% Similarity=0.120 Sum_probs=64.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+.+.+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +.++-+..++..+.
T Consensus 22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 3668999999 899999999999999546788876653332211 11111122344443
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
..+... .+.+.|+||.+.. +++ .-..+-++|.++++.+|+.++.+.+|
T Consensus 101 ~~i~~~~~~~~~~~~DlVvd~~D---------~~~--------~r~~ln~~~~~~~ip~v~~~~~g~~G 152 (240)
T TIGR02355 101 AKLDDAELAALIAEHDIVVDCTD---------NVE--------VRNQLNRQCFAAKVPLVSGAAIRMEG 152 (240)
T ss_pred ccCCHHHHHHHhhcCCEEEEcCC---------CHH--------HHHHHHHHHHHcCCCEEEEEecccEe
Confidence 333221 2346888888863 111 12345688888888898877654444
No 376
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.12 E-value=0.0018 Score=46.11 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=47.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
++++++|+|+ |.+|..+++.|.+.+...|.+.+|+.+........+.. ..+.....|.. ....++|+||++....
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~Dvvi~~~~~~ 92 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE-LGIAIAYLDLE-ELLAEADLIINTTPVG 92 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh-cccceeecchh-hccccCCEEEeCcCCC
Confidence 5689999995 99999999999998447899988865443332222211 00111112221 2246799999998643
No 377
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.09 E-value=0.0028 Score=51.89 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=42.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCe---EEEEcCCCCCChhhhhhhhcCCceEEEeccccc-cccCCcCEEEEccC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLAC 106 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~d~vi~~ag 106 (190)
|++|.|.||||++|+.+.+.|+++.... +..+...... .....+.+ . .....++.+ ..+.++|++|.+++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg--~~~~~f~g-~--~~~v~~~~~~~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG--GAAPSFGG-K--EGTLQDAFDIDALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC--CcccccCC-C--cceEEecCChhHhcCCCEEEECCC
Confidence 3689999999999999999777764544 5555442111 11111111 1 122233332 34567999999985
No 378
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.07 E-value=0.0047 Score=46.57 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=54.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
+.+++|+|.| +|-+|..-++.|++. |..|++++.... +.+..+....++.++..+.....+.+.+.||-+-
T Consensus 7 l~gk~vlVvG-gG~va~rk~~~Ll~~-ga~VtVvsp~~~---~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at 77 (205)
T TIGR01470 7 LEGRAVLVVG-GGDVALRKARLLLKA-GAQLRVIAEELE---SELTLLAEQGGITWLARCFDADILEGAFLVIAAT 77 (205)
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHC-CCEEEEEcCCCC---HHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECC
Confidence 4789999999 899999999999998 889999875432 3344444455888888887766667788877654
No 379
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.05 E-value=0.0074 Score=49.72 Aligned_cols=104 Identities=19% Similarity=0.167 Sum_probs=63.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh----------------------hhhhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK----------------------DNLRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~----------------------~~~~~~~~~~~~~~~~ 87 (190)
+..++|+|.| .|.+|..+++.|+..|-.++.++++..-... ..+.++.+...+..+.
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 3678999998 7899999999999994468888877521110 1111111222333443
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceec
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~ 151 (190)
..+... .+.++|+||++... .. .-..+-++|.+.++.+|+.+..+.+
T Consensus 212 ~~~~~~~~~~~~~~~D~Vv~~~d~---------~~--------~r~~ln~~~~~~~ip~i~~~~~g~~ 262 (376)
T PRK08762 212 ERVTSDNVEALLQDVDVVVDGADN---------FP--------TRYLLNDACVKLGKPLVYGAVFRFE 262 (376)
T ss_pred ccCChHHHHHHHhCCCEEEECCCC---------HH--------HHHHHHHHHHHcCCCEEEEEeccCE
Confidence 333321 23569999998731 11 1123667889999899988765433
No 380
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.02 E-value=0.017 Score=44.36 Aligned_cols=102 Identities=12% Similarity=0.139 Sum_probs=62.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEec
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH 88 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~ 88 (190)
.+.+|+|.| .|.+|.++++.|+..|-.++++++...-...+. +..+-+..++..+..
T Consensus 10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 568899999 899999999999999546888876553221111 111111223444443
Q ss_pred ccccc----c-cCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEeccee
Q 029640 89 DVTEP----L-LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 150 (190)
Q Consensus 89 D~~~~----~-~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~ 150 (190)
.+..+ . ..++|+||.+... ...-..+.+.|.++++++|...+++-
T Consensus 89 ~i~~~~~~~l~~~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~ip~I~s~g~g~ 138 (231)
T cd00755 89 FLTPDNSEDLLGGDPDFVVDAIDS-----------------IRAKVALIAYCRKRKIPVISSMGAGG 138 (231)
T ss_pred ecCHhHHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCCCEEEEeCCcC
Confidence 33311 1 1358999888631 11223577889888888887766443
No 381
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.02 E-value=0.0016 Score=48.97 Aligned_cols=70 Identities=19% Similarity=0.191 Sum_probs=45.5
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
.+.+|+++|+| .|.+|+.+++.|.+. |++|++.+++.+........+ .... .|..+....++|+++.+|.
T Consensus 25 ~l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~----g~~~--v~~~~l~~~~~Dv~vp~A~ 94 (200)
T cd01075 25 SLEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELF----GATV--VAPEEIYSVDADVFAPCAL 94 (200)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHc----CCEE--EcchhhccccCCEEEeccc
Confidence 35789999999 579999999999998 899998877543222211111 1222 2222222336888887764
No 382
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.02 E-value=0.015 Score=45.02 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=63.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +..+-+..++..+.
T Consensus 30 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVG-LGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 4678999999 599999999999999546788876653222111 11111223445554
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
..+... .+.++|+||.+.. +++ .-..+-++|.++++.+|+.++.+
T Consensus 109 ~~i~~~~~~~~~~~~DiVi~~~D---------~~~--------~r~~ln~~~~~~~ip~v~~~~~g 157 (245)
T PRK05690 109 ARLDDDELAALIAGHDLVLDCTD---------NVA--------TRNQLNRACFAAKKPLVSGAAIR 157 (245)
T ss_pred ccCCHHHHHHHHhcCCEEEecCC---------CHH--------HHHHHHHHHHHhCCEEEEeeecc
Confidence 444432 2356999998862 111 12346678888888888766543
No 383
>PRK08328 hypothetical protein; Provisional
Probab=96.99 E-value=0.0065 Score=46.67 Aligned_cols=105 Identities=17% Similarity=0.217 Sum_probs=63.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh-----------------------hhhhhcCCceEEE
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-----------------------LRKWIGHPRFELI 86 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~-----------------------~~~~~~~~~~~~~ 86 (190)
+.+.+|+|.| .|.+|.++++.|+..|-.++.+++.+.-...+. +..+-+...+..+
T Consensus 25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~ 103 (231)
T PRK08328 25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF 103 (231)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 3668999999 899999999999999546788876543221111 1111112233333
Q ss_pred ecccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 87 RHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 87 ~~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
...+... .+.++|+||.+... . ..-..+-+.|.++++.+|+.++.+.+|
T Consensus 104 ~~~~~~~~~~~~l~~~D~Vid~~d~---------~--------~~r~~l~~~~~~~~ip~i~g~~~g~~G 156 (231)
T PRK08328 104 VGRLSEENIDEVLKGVDVIVDCLDN---------F--------ETRYLLDDYAHKKGIPLVHGAVEGTYG 156 (231)
T ss_pred eccCCHHHHHHHHhcCCEEEECCCC---------H--------HHHHHHHHHHHHcCCCEEEEeeccCEE
Confidence 3333221 13467888877621 1 111235567888888999888776655
No 384
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.00099 Score=53.15 Aligned_cols=74 Identities=11% Similarity=0.153 Sum_probs=48.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecc---ccccccCCcCEEEEccCCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD---VTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~d~vi~~ag~~~ 109 (190)
..++|-|++||.|.-+++.|+.+ +.+..+-.|+..+....-..+. .....+.+. ..+....+.++|+||+|+..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~-g~~~aLAgRs~~kl~~l~~~LG--~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLARE-GLTAALAGRSSAKLDALRASLG--PEAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHc-CCchhhccCCHHHHHHHHHhcC--ccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 56899999999999999999999 6676666775444332222111 122223222 22334567999999999654
No 385
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.96 E-value=0.017 Score=46.34 Aligned_cols=101 Identities=16% Similarity=0.285 Sum_probs=64.6
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEecccc
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHDVT 91 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D~~ 91 (190)
+|+|.| .|.+|.++++.|+..|-.++.+++.+.-...+. +.++-+..++..+..++.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 589999 799999999999999546888876653222111 111112235555656665
Q ss_pred cc-----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 92 EP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 92 ~~-----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
+. .+.++|+||.+.. + ...-..+-+.|..+++.+|..++.+.+|
T Consensus 80 ~~~~~~~f~~~~DvVv~a~D---------n--------~~ar~~in~~c~~~~ip~I~~gt~G~~G 128 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALD---------N--------LAARRHVNKMCLAADVPLIESGTTGFLG 128 (312)
T ss_pred CccchHHHHhcCCEEEECCC---------C--------HHHHHHHHHHHHHCCCCEEEEecCccee
Confidence 42 2357899988862 1 1112345678888888888888766555
No 386
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.96 E-value=0.013 Score=48.01 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=56.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCC---eEEEE-cCCCCCChhhhhhhhcCCceEEEecccccc-ccCCcCEEEEccCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKN---EVIVV-DNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACP 107 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~---~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~d~vi~~ag~ 107 (190)
++|.|.|+||.+|+.+++.|..+... +++.+ .++..+.... +..... ...++.+. .+.++|++|.++|.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~----f~~~~~--~v~~~~~~~~~~~vDivffa~g~ 74 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPS----FGGTTG--TLQDAFDIDALKALDIIITCQGG 74 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCC----CCCCcc--eEEcCcccccccCCCEEEEcCCH
Confidence 47899999999999999999954333 23333 2222222111 111122 33345443 66789999999962
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
. .+..+...+++.|..-+.++.++.|.
T Consensus 75 ~------------------~s~~~~p~~~~aG~~~~VIDnSSa~R 101 (366)
T TIGR01745 75 D------------------YTNEIYPKLRESGWQGYWIDAASSLR 101 (366)
T ss_pred H------------------HHHHHHHHHHhCCCCeEEEECChhhh
Confidence 1 13456667778885444455555554
No 387
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.95 E-value=0.011 Score=50.01 Aligned_cols=76 Identities=16% Similarity=0.123 Sum_probs=51.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh-hhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
..+++|+|.| .|..|..+++.|.+. |+.|++.++++...... ...+ ...++.+...+-......++|.||...|..
T Consensus 12 ~~~~~i~v~G-~G~sG~a~a~~L~~~-G~~V~~~D~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~ 88 (458)
T PRK01710 12 IKNKKVAVVG-IGVSNIPLIKFLVKL-GAKVTAFDKKSEEELGEVSNEL-KELGVKLVLGENYLDKLDGFDVIFKTPSMR 88 (458)
T ss_pred hcCCeEEEEc-ccHHHHHHHHHHHHC-CCEEEEECCCCCccchHHHHHH-HhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence 3578999999 889999999999999 89999998765432211 1122 123455554433323345789999998754
No 388
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.92 E-value=0.022 Score=43.13 Aligned_cols=106 Identities=19% Similarity=0.230 Sum_probs=63.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh---------------------hhhhhhcCCceEEEec
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---------------------NLRKWIGHPRFELIRH 88 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~---------------------~~~~~~~~~~~~~~~~ 88 (190)
+...+|+|.| .|.+|..+++.|+..+-.++.+++.+.-...+ .+..+-+..++..+..
T Consensus 26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 3668999999 79999999999999944678888775211110 0111112234444444
Q ss_pred ccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHc-CCeEEEEecceecCC
Q 029640 89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GARILLTSTSEVYGD 153 (190)
Q Consensus 89 D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~i~vSS~~~~~~ 153 (190)
.+.+. .+.++|+||.+.. ++ ..-..+.+.|.+. ++.+|+.+...-|+.
T Consensus 105 ~i~~~~~~~~~~~~DvVI~a~D---------~~--------~~r~~l~~~~~~~~~~p~I~~~~~~~~~~ 157 (212)
T PRK08644 105 KIDEDNIEELFKDCDIVVEAFD---------NA--------ETKAMLVETVLEHPGKKLVAASGMAGYGD 157 (212)
T ss_pred ecCHHHHHHHHcCCCEEEECCC---------CH--------HHHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence 44332 2346899888841 11 1123456777777 778888766554443
No 389
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.89 E-value=0.014 Score=47.76 Aligned_cols=105 Identities=15% Similarity=0.043 Sum_probs=66.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+.+.+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +.++-+..++..+.
T Consensus 26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 4678999999 799999999999999446788876653221111 11111223455554
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
..+..+ .+.++|+||.+... . ..-..+-++|.+.++.+|+.+..+.+|
T Consensus 105 ~~i~~~~~~~~~~~~DvVvd~~d~---------~--------~~r~~~n~~c~~~~ip~v~~~~~g~~g 156 (355)
T PRK05597 105 RRLTWSNALDELRDADVILDGSDN---------F--------DTRHLASWAAARLGIPHVWASILGFDA 156 (355)
T ss_pred eecCHHHHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence 444432 23579999988731 1 111235678888888899887655443
No 390
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.88 E-value=0.0041 Score=49.28 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=48.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEeccccccccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
.+++++|.| +|..|++++..|+..+-.+|.++.|+.++.......+... ..+.....+-......+.|+||++.
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHAT 200 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence 568999999 6889999999999994358999999765554443333211 1222222221122345689999994
No 391
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.86 E-value=0.0036 Score=49.54 Aligned_cols=77 Identities=12% Similarity=0.010 Sum_probs=48.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEec-cccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~d~vi~~ag~~ 108 (190)
.+++++|.| +|..|+.++..|.+.+-.+|+++.|+.++.......+.....+..+.. +-......+.|+|||+....
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 578999999 799999999999999446899999975544433332211111211110 10112235689999997644
No 392
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.83 E-value=0.0034 Score=47.13 Aligned_cols=39 Identities=31% Similarity=0.324 Sum_probs=31.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD 72 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~ 72 (190)
||++.|.| +|.||..+++.|.+. +++|.+-.|+.++...
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~a-g~eV~igs~r~~~~~~ 39 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKA-GHEVIIGSSRGPKALA 39 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhC-CCeEEEecCCChhHHH
Confidence 46666666 999999999999999 8999998776655443
No 393
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.81 E-value=0.0039 Score=49.33 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=32.1
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r 65 (190)
.+.+++++|.|++|.+|+.++..|++. +..|+++.|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~ 191 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHS 191 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeC
Confidence 358999999999999999999999998 678888876
No 394
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.78 E-value=0.01 Score=42.78 Aligned_cols=68 Identities=16% Similarity=0.228 Sum_probs=47.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
+.+++|+|.| +|-+|...++.|++. +++|+++.. +.. ..+..+ ..+.+..-.+......+.|.||-+.
T Consensus 11 l~~~~vlVvG-GG~va~rka~~Ll~~-ga~V~VIsp--~~~-~~l~~l---~~i~~~~~~~~~~dl~~a~lViaaT 78 (157)
T PRK06719 11 LHNKVVVIIG-GGKIAYRKASGLKDT-GAFVTVVSP--EIC-KEMKEL---PYITWKQKTFSNDDIKDAHLIYAAT 78 (157)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcC--ccC-HHHHhc---cCcEEEecccChhcCCCceEEEECC
Confidence 5789999999 899999999999998 899998842 222 222222 2455555555555566778777654
No 395
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.77 E-value=0.02 Score=47.45 Aligned_cols=104 Identities=19% Similarity=0.129 Sum_probs=64.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEec
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH 88 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~ 88 (190)
...+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +.++-+..++..+..
T Consensus 41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 568999999 899999999999999446777776543222111 111111123444444
Q ss_pred ccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 89 D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
.+... .+.++|+||.+.. + ...-..+-++|.+.++.+|+.+..+.+|
T Consensus 120 ~i~~~~~~~~~~~~D~Vvd~~d---------~--------~~~r~~ln~~~~~~~~p~v~~~~~g~~G 170 (392)
T PRK07878 120 RLDPSNAVELFSQYDLILDGTD---------N--------FATRYLVNDAAVLAGKPYVWGSIYRFEG 170 (392)
T ss_pred cCChhHHHHHHhcCCEEEECCC---------C--------HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 44332 2346898887762 1 1112345678888888999888766555
No 396
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.77 E-value=0.006 Score=48.72 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=51.1
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCCCccc
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFY 113 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~~~~ 113 (190)
+|.|.|++||.|..+++.|..+...++..+..+... . ..|. +....++|++|.+.....
T Consensus 3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~--------------~--~~~~-~~~~~~~D~vFlalp~~~---- 61 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRK--------------D--AAER-AKLLNAADVAILCLPDDA---- 61 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCCCCeEEEEEeccccc--------------C--cCCH-hHhhcCCCEEEECCCHHH----
Confidence 699999999999999999999965565555332110 0 0011 112246899998874210
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 114 KYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 114 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
+..++..+.+.++++|=.|+..
T Consensus 62 --------------s~~~~~~~~~~g~~VIDlSadf 83 (310)
T TIGR01851 62 --------------AREAVSLVDNPNTCIIDASTAY 83 (310)
T ss_pred --------------HHHHHHHHHhCCCEEEECChHH
Confidence 2334455555677888777755
No 397
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.76 E-value=0.024 Score=47.65 Aligned_cols=111 Identities=12% Similarity=0.089 Sum_probs=69.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhc---C-CCeE--EEEcCC--CCCChhhhhhhhcC-----CceEEEeccccccccCCcC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMEN---E-KNEV--IVVDNY--FTGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD 99 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~---~-~~~v--~~~~r~--~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~d 99 (190)
.+|+||||+|.||.+|+..++.- | ...| .+++.. .+...-...++.+. ..+.... | ...++.++|
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~-~~ea~~daD 201 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D-LDVAFKDAH 201 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C-CHHHhCCCC
Confidence 67999999999999999999983 1 2333 334442 12221111112111 1233321 2 235677899
Q ss_pred EEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC---CeEEEEec
Q 029640 100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST 147 (190)
Q Consensus 100 ~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~i~vSS 147 (190)
+||-.+|... ...+...+.++.|..-...+.+...++. .+++.+.|
T Consensus 202 vvIitag~pr--k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 202 VIVLLDDFLI--KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred EEEECCCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 9999998543 2334566788999999888888887664 46777765
No 398
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.75 E-value=0.0036 Score=47.60 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=32.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS 70 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~ 70 (190)
|+|.|+||+|.+|..++..|.+. +++|.+..|+++..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~-G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA-GNKIIIGSRDLEKA 37 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-CCEEEEEEcCHHHH
Confidence 57999999999999999999998 79999888865443
No 399
>PRK04148 hypothetical protein; Provisional
Probab=96.73 E-value=0.018 Score=40.28 Aligned_cols=88 Identities=24% Similarity=0.333 Sum_probs=61.8
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccC---CcCEEEEccCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACP 107 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~---~~d~vi~~ag~ 107 (190)
+++++++.| .| -|..++..|.+. |++|++++.++..... .. ...+..+..|+.+.... +.|.|.-+=
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~-a~----~~~~~~v~dDlf~p~~~~y~~a~liysir-- 85 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEK-AK----KLGLNAFVDDLFNPNLEIYKNAKLIYSIR-- 85 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHH-HH----HhCCeEEECcCCCCCHHHHhcCCEEEEeC--
Confidence 457899999 77 899999999998 8999999886553221 11 22578899999987653 567664332
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEE
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i 143 (190)
.+.+. ...+++.+++.+..++
T Consensus 86 --------pp~el-------~~~~~~la~~~~~~~~ 106 (134)
T PRK04148 86 --------PPRDL-------QPFILELAKKINVPLI 106 (134)
T ss_pred --------CCHHH-------HHHHHHHHHHcCCCEE
Confidence 22232 2468889999888544
No 400
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.71 E-value=0.0026 Score=50.48 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=46.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
+.+++++|+| .|.+|+.+++.|... |.+|.+..|+...... .. ......+..+-......+.|+||++.
T Consensus 149 l~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~----~~-~~g~~~~~~~~l~~~l~~aDiVint~ 217 (287)
T TIGR02853 149 IHGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLAR----IT-EMGLIPFPLNKLEEKVAEIDIVINTI 217 (287)
T ss_pred CCCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHH----HH-HCCCeeecHHHHHHHhccCCEEEECC
Confidence 4689999999 688999999999998 7899999886432211 11 11222222222223446799999986
No 401
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.71 E-value=0.013 Score=54.09 Aligned_cols=72 Identities=22% Similarity=0.283 Sum_probs=48.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCe-------------EEEEcCCCCCChhhhhhhhcCCceEEEeccccccc---
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNE-------------VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--- 94 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--- 94 (190)
.+++|+|.| +|++|+..++.|.+..+.+ |.+.++..+.... +... ..++..++.|+.|.+
T Consensus 568 ~~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~-la~~--~~~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 568 KSQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE-TVEG--IENAEAVQLDVSDSESLL 643 (1042)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH-HHHh--cCCCceEEeecCCHHHHH
Confidence 468999999 6999999999999874433 6666664332222 1111 125667888887753
Q ss_pred --cCCcCEEEEccC
Q 029640 95 --LIEVDQIYHLAC 106 (190)
Q Consensus 95 --~~~~d~vi~~ag 106 (190)
..++|+||.+..
T Consensus 644 ~~v~~~DaVIsalP 657 (1042)
T PLN02819 644 KYVSQVDVVISLLP 657 (1042)
T ss_pred HhhcCCCEEEECCC
Confidence 246999999985
No 402
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.69 E-value=0.03 Score=43.10 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=62.7
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEecccc
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHDVT 91 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D~~ 91 (190)
+|+|.| .|.+|.++++.|+..|-.++.+++.+.-...+. +.++-+..++..+..++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 488999 899999999999999546788876653221111 111112234555555553
Q ss_pred c------cccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 92 E------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 92 ~------~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
+ ....++|+||.+.. |...-..+-+.|...++.+|..++.+.+|
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~iplI~~g~~G~~G 129 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIVPLIESGTEGFKG 129 (234)
T ss_pred hhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence 2 12356899988752 12223446677888888888877755444
No 403
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.68 E-value=0.012 Score=47.12 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=30.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT 68 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~ 68 (190)
++|.|+| .|.+|..++..|+++ |++|++.+|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~-G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARA-GHEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHC-CCeeEEEeCCHH
Confidence 5799999 999999999999999 899999998754
No 404
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.66 E-value=0.057 Score=42.42 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=30.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
+.+.+|+|.| .|.+|.++++.|+..+-.++++++.+
T Consensus 28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3678999999 89999999999999943688888655
No 405
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.61 E-value=0.0042 Score=51.79 Aligned_cols=77 Identities=13% Similarity=0.127 Sum_probs=51.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
..+++++|.| +|.+|+.+++.|...+...++++.|..+........ .+. ......|-....+.+.|+||++.+...
T Consensus 179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~~--~~~~~~~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FRN--ASAHYLSELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hcC--CeEecHHHHHHHhccCCEEEECcCCCC
Confidence 4779999999 699999999999998446899999975443332222 211 222222322234567999999987544
Q ss_pred C
Q 029640 110 P 110 (190)
Q Consensus 110 ~ 110 (190)
+
T Consensus 255 ~ 255 (414)
T PRK13940 255 Y 255 (414)
T ss_pred e
Confidence 3
No 406
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=96.61 E-value=0.041 Score=43.98 Aligned_cols=106 Identities=14% Similarity=0.110 Sum_probs=71.2
Q ss_pred EEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcC-----CceEEEeccccccccCCcCEEEEccCCCCC
Q 029640 37 VTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVDQIYHLACPASP 110 (190)
Q Consensus 37 ItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~d~vi~~ag~~~~ 110 (190)
|.| .|.+|..++..|+..+- .++.++++..+.......++.+. ..+.....| .+.+.+.|+||-.||...
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daDivVitag~~r- 76 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGD--YSDCKDADLVVITAGAPQ- 76 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCC--HHHHCCCCEEEECCCCCC-
Confidence 456 69999999999988743 47888888665555444443221 122332222 245678999999998643
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
....+..+.++.|..-...+.+.+++++- .+|.+|.
T Consensus 77 -k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 77 -KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 22345667889999999999888877653 6666665
No 407
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.60 E-value=0.029 Score=46.16 Aligned_cols=105 Identities=20% Similarity=0.258 Sum_probs=64.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +..+-+..++..+.
T Consensus 39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 3568999999 899999999999999446888887653221111 11111223444444
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
..+... .+.++|+||.|... ...-..+-++|.+.++.+|+.+..+.+|
T Consensus 118 ~~i~~~~~~~~~~~~DlVid~~Dn-----------------~~~r~~in~~~~~~~iP~v~~~~~g~~G 169 (370)
T PRK05600 118 ERLTAENAVELLNGVDLVLDGSDS-----------------FATKFLVADAAEITGTPLVWGTVLRFHG 169 (370)
T ss_pred eecCHHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence 444321 24569999888731 1112345578888888888877654333
No 408
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.58 E-value=0.007 Score=48.26 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=61.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEE-eccccccccCCcCEEEEccCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI-RHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
.|+++.|+|+.| ||.--++.-... |.+|+++++...+.++.+..+....-+... ..|.......-.|.++|++....
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a 258 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLA 258 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeecc
Confidence 789999999888 999888888888 999999999877777776655432222222 22332222233566666553111
Q ss_pred CcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 029640 110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147 (190)
Q Consensus 110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS 147 (190)
+.. ...++++++..+ ++|+++-
T Consensus 259 ----~~~-----------~~~~~~~lk~~G-t~V~vg~ 280 (360)
T KOG0023|consen 259 ----EHA-----------LEPLLGLLKVNG-TLVLVGL 280 (360)
T ss_pred ----ccc-----------hHHHHHHhhcCC-EEEEEeC
Confidence 111 123555666544 8888874
No 409
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.56 E-value=0.0049 Score=47.13 Aligned_cols=69 Identities=20% Similarity=0.327 Sum_probs=51.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------CCcCEEEEccC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLAC 106 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------~~~d~vi~~ag 106 (190)
|+++|.| .|-+|+.+++.|.++ |++|.++.++.+....... .....+.+.+|-++... .++|+++-.-+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~---~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEE-GHNVVLIDRDEERVEEFLA---DELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhC-CCceEEEEcCHHHHHHHhh---hhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 5788888 899999999999999 8999999886544333221 12467888899988643 45888887664
No 410
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.024 Score=48.14 Aligned_cols=72 Identities=24% Similarity=0.185 Sum_probs=48.8
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
.+++|+|.| .|..|..+++.|++. |..|++.+++..... ++....++.+...+-......++|.||...|+.
T Consensus 14 ~~~~v~v~G-~G~sG~a~a~~L~~~-G~~V~~~D~~~~~~~----~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 14 LSGRVLVAG-AGVSGRGIAAMLSEL-GCDVVVADDNETARH----KLIEVTGVADISTAEASDQLDSFSLVVTSPGWR 85 (473)
T ss_pred cCCeEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCChHHHH----HHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence 678899999 889999999999999 789999887543221 111122455544322222345689999998865
No 411
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.54 E-value=0.017 Score=45.21 Aligned_cols=115 Identities=19% Similarity=0.083 Sum_probs=69.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCC-CCCChhhhhhhhcCCceEEEe-ccccccccCCcCEEEEccCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNY-FTGSKDNLRKWIGHPRFELIR-HDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~d~vi~~ag~ 107 (190)
.+-+|.|.|+.|.||+.|.-.|..... .+..+.+-. -+.....+-++-....+..+. .|-....+.+.|+|+--||.
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGV 106 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGV 106 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCC
Confidence 567899999999999999877665522 122222211 112222222221122333322 22223345679999999985
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcC-C-eEEEEec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTST 147 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~i~vSS 147 (190)
.. ......++.|.+|..-...+..++.+.. . .+.++|.
T Consensus 107 PR--KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 107 PR--KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred CC--CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 43 3345567889999999999988887764 3 5666765
No 412
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.54 E-value=0.0076 Score=43.99 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=31.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
+.+++++|.|+++.+|..+++.|.++ +.+|.++.|.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~-g~~V~v~~r~ 77 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNR-NATVTVCHSK 77 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhC-CCEEEEEECC
Confidence 58899999998777899999999998 7788888875
No 413
>PRK08223 hypothetical protein; Validated
Probab=96.52 E-value=0.068 Score=42.34 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=63.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +.++-+..++..+.
T Consensus 25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 3678999999 899999999999999546787776653222111 11111223455554
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
..++.+ .+.++|+||.+.- ++ +...-..+-++|.++++.+|+.+...
T Consensus 104 ~~l~~~n~~~ll~~~DlVvD~~D---------~~------~~~~r~~ln~~c~~~~iP~V~~~~~g 154 (287)
T PRK08223 104 EGIGKENADAFLDGVDVYVDGLD---------FF------EFDARRLVFAACQQRGIPALTAAPLG 154 (287)
T ss_pred cccCccCHHHHHhCCCEEEECCC---------CC------cHHHHHHHHHHHHHcCCCEEEEeccC
Confidence 444432 2346898886652 11 01112456688999998888876533
No 414
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.51 E-value=0.0081 Score=47.49 Aligned_cols=108 Identities=16% Similarity=0.080 Sum_probs=65.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCC-ceEEEeccccccccC-CcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP-RFELIRHDVTEPLLI-EVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~-~~d~vi~~ag~~ 108 (190)
++++++|.| +|..+++++..|++.+-.+++++.|..+........+.... .+.. .+..+.... ..|+|||+-...
T Consensus 125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~~~dliINaTp~G 201 (283)
T COG0169 125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLEEADLLINATPVG 201 (283)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--ccccccccccccCEEEECCCCC
Confidence 578999999 78899999999999943789999997665444333322111 1112 223222323 589999997544
Q ss_pred CCcccccC--ch-------hHHHHHHH-HHHHHHHHHHHcCCe
Q 029640 109 SPIFYKYN--PV-------KTIKTNVI-GTLNMLGLAKRVGAR 141 (190)
Q Consensus 109 ~~~~~~~~--~~-------~~~~~n~~-~~~~l~~~~~~~~~~ 141 (190)
.......+ +. -.+++.+. ..-.+++.|++++++
T Consensus 202 m~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~ 244 (283)
T COG0169 202 MAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK 244 (283)
T ss_pred CCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence 32210010 01 12333443 234678899998877
No 415
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=96.50 E-value=0.032 Score=46.85 Aligned_cols=75 Identities=19% Similarity=0.096 Sum_probs=54.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
+|+|+|.| -|--|..+++.|.+. |..|++.+.++.. ............+....+...+.....+|.||-+.|+..
T Consensus 7 ~~kv~V~G-LG~sG~a~a~~L~~~-G~~v~v~D~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~ 81 (448)
T COG0771 7 GKKVLVLG-LGKSGLAAARFLLKL-GAEVTVSDDRPAP-EGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPP 81 (448)
T ss_pred CCEEEEEe-cccccHHHHHHHHHC-CCeEEEEcCCCCc-cchhhhhhhccCceeecCccchhccccCCEEEECCCCCC
Confidence 89999999 899999999999999 8999999866554 211111112345566555555555677999999998654
No 416
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.49 E-value=0.049 Score=43.44 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=65.3
Q ss_pred EEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCCCCChhhhhhhhcC-----CceEEEe-ccccccccCCcCEEEEccCC
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGH-----PRFELIR-HDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~-~D~~~~~~~~~d~vi~~ag~ 107 (190)
|.|+|+ |.+|..++..|+.+ +. +|.+++++.+.......++... ....+.. .| ..++.+.|+||.++|.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~-~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d--~~~l~dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALK-ELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND--YEDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhC-CCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC--HHHhCCCCEEEEecCC
Confidence 468996 99999999999987 43 9999988755332111111110 1122221 33 2346789999999985
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 029640 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST 147 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~i~vSS 147 (190)
... ......+.+..|+.....+++...+... .+|.+|.
T Consensus 77 p~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN 116 (300)
T cd01339 77 PRK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN 116 (300)
T ss_pred CCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 432 2233345566777777777777766543 4555554
No 417
>PRK07411 hypothetical protein; Validated
Probab=96.47 E-value=0.04 Score=45.69 Aligned_cols=105 Identities=14% Similarity=0.060 Sum_probs=65.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|..+++.|+..|-.++.+++.+.-...+. +..+-+..++..+.
T Consensus 36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 3668999999 899999999999999546788776653222111 11111223455555
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
..+... .+.++|+||.+... .+ .-..+-++|.+.++.+|+.+..+-+|
T Consensus 115 ~~~~~~~~~~~~~~~D~Vvd~~d~---------~~--------~r~~ln~~~~~~~~p~v~~~~~g~~g 166 (390)
T PRK07411 115 TRLSSENALDILAPYDVVVDGTDN---------FP--------TRYLVNDACVLLNKPNVYGSIFRFEG 166 (390)
T ss_pred cccCHHhHHHHHhCCCEEEECCCC---------HH--------HHHHHHHHHHHcCCCEEEEEEccCEE
Confidence 545432 23569999988731 11 11235578888888888877655444
No 418
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.46 E-value=0.078 Score=38.86 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=27.4
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF 67 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~ 67 (190)
+|+|.| .|.+|..+++.|+..+-.++.+++.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 488999 799999999999999435788887764
No 419
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.45 E-value=0.017 Score=46.45 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=53.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhc-CCCe-EEE--EcCCCCCChhhhhhhhcCCceEEEeccccc-cccCCcCEEEEccC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMEN-EKNE-VIV--VDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLAC 106 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~-~~~~-v~~--~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~d~vi~~ag 106 (190)
+++|.|.|+||.+|+.+++.|.++ .... +.+ ..|+.....-.+.. ..+... -+..+ ....++|++|.++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~----~~~~v~-~~~~~~~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGG----KSIGVP-EDAADEFVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccC----ccccCc-cccccccccccCCEEEEeCc
Confidence 368999999999999999999995 2222 222 23322222111111 011111 11111 23447999999996
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCC
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~ 153 (190)
... +..+...+.+.| .+.++.++.|..
T Consensus 76 ~~~------------------s~~~~p~~~~~G--~~VIdnsSa~Rm 102 (334)
T COG0136 76 GSV------------------SKEVEPKAAEAG--CVVIDNSSAFRM 102 (334)
T ss_pred hHH------------------HHHHHHHHHHcC--CEEEeCCccccc
Confidence 321 244666777777 444555555543
No 420
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=96.43 E-value=0.034 Score=45.29 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=27.6
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r 65 (190)
+.+|.|.|. |.||+.+++.+.++.+.++..+..
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d 33 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAK 33 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEEC
Confidence 368999997 999999999999876677777654
No 421
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.42 E-value=0.0057 Score=49.85 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=45.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCC-CeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc----ccCCcCEEEEc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP----LLIEVDQIYHL 104 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~d~vi~~ 104 (190)
.+++.|||.||+|.+|+++++.+... + ..|.+.++ ....+..+.+....-+++-..|+.+. ...++|+|+.|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~-~~~~v~t~~s--~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~ 232 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA-GAIKVVTACS--KEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDC 232 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc-CCcEEEEEcc--cchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEEC
Confidence 46789999999999999999998888 5 55555544 22233333332111122211122211 13369999999
Q ss_pred cCC
Q 029640 105 ACP 107 (190)
Q Consensus 105 ag~ 107 (190)
.|.
T Consensus 233 vg~ 235 (347)
T KOG1198|consen 233 VGG 235 (347)
T ss_pred CCC
Confidence 985
No 422
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.42 E-value=0.0059 Score=48.65 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=46.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
+.+++++|+| .|.+|+.++..|... |.+|++.+|+..... ... .....++..+-......+.|+||++.
T Consensus 150 l~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~-~~~----~~G~~~~~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 150 IHGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLA-RIT----EMGLSPFHLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHH-HHH----HcCCeeecHHHHHHHhCCCCEEEECC
Confidence 3679999999 588999999999998 789999988643211 111 11233332222223346799999986
No 423
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.39 E-value=0.021 Score=48.04 Aligned_cols=67 Identities=22% Similarity=0.377 Sum_probs=49.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc------cCCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~d~vi~~a 105 (190)
|+++|+|+ |.+|+.+++.|.++ +++|.+++++++. ...+.....+.++.+|..+.. ..++|.||.+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~-g~~v~vid~~~~~----~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE-NNDVTVIDTDEER----LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCcEEEEECCHHH----HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 57999995 99999999999998 8899999875443 322222236788888887652 34688877765
No 424
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.36 E-value=0.0064 Score=48.78 Aligned_cols=73 Identities=19% Similarity=0.276 Sum_probs=48.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
..+++|+|.| +|-+|..+++.|...+..+|+++.|+.+........+ + ......+-......+.|+||.+.+.
T Consensus 176 l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-g---~~~~~~~~~~~~l~~aDvVi~at~~ 248 (311)
T cd05213 176 LKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-G---GNAVPLDELLELLNEADVVISATGA 248 (311)
T ss_pred ccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-C---CeEEeHHHHHHHHhcCCEEEECCCC
Confidence 3689999999 5999999999999875578999988654433332222 1 1222222112234568999999864
No 425
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=96.32 E-value=0.02 Score=52.76 Aligned_cols=104 Identities=11% Similarity=0.096 Sum_probs=68.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh----------------------hhhhhhhcCCceEEEec
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK----------------------DNLRKWIGHPRFELIRH 88 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~----------------------~~~~~~~~~~~~~~~~~ 88 (190)
...+|+|.| .|.+|.++++.|+..|-..+.+++...-... ..+.++-+...+.....
T Consensus 23 ~~s~VLIiG-~gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~ 101 (1008)
T TIGR01408 23 AKSNVLISG-MGGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSSSV 101 (1008)
T ss_pred hhCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEecc
Confidence 557899999 6889999999999995467887765422111 11122212235555555
Q ss_pred cccccccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcC--CeEEEEecceecC
Q 029640 89 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYG 152 (190)
Q Consensus 89 D~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~i~vSS~~~~~ 152 (190)
++..+.+.++|+||.+-. +.. ....+-++|++++ +.+|+.++.+.||
T Consensus 102 ~l~~e~l~~fdvVV~t~~---------~~~--------~~~~in~~cr~~~~~I~fI~~~~~G~~G 150 (1008)
T TIGR01408 102 PFNEEFLDKFQCVVLTEM---------SLP--------LQKEINDFCHSQCPPIAFISADVRGLFG 150 (1008)
T ss_pred cCCHHHHcCCCEEEECCC---------CHH--------HHHHHHHHHHHcCCCeEEEEEeecceEE
Confidence 565555668999988642 111 1235668999998 6799888877666
No 426
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.27 E-value=0.012 Score=50.66 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=46.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEec-cccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~d~vi~~ag~~ 108 (190)
+.+++++|+|+ |.+|++++..|++. |.+|.++.|+.+........+ .. ..+.. |+.+......|+|||+....
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~-G~~V~i~nR~~e~a~~la~~l-~~---~~~~~~~~~~~~~~~~diiINtT~vG 450 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEK-GARVVIANRTYERAKELADAV-GG---QALTLADLENFHPEEGMILANTTSVG 450 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHh-CC---ceeeHhHhhhhccccCeEEEecccCC
Confidence 36789999996 89999999999999 679999888644333322222 11 11111 11111122468888887644
Q ss_pred C
Q 029640 109 S 109 (190)
Q Consensus 109 ~ 109 (190)
.
T Consensus 451 m 451 (529)
T PLN02520 451 M 451 (529)
T ss_pred C
Confidence 3
No 427
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.26 E-value=0.13 Score=34.12 Aligned_cols=64 Identities=22% Similarity=0.305 Sum_probs=44.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
+++++|+|.| +|-+|..-++.|++. |.+|+++.... .... ..+.+..-+.. ..+.+.+.||-+-
T Consensus 5 l~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~----~~~~-----~~i~~~~~~~~-~~l~~~~lV~~at 68 (103)
T PF13241_consen 5 LKGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI----EFSE-----GLIQLIRREFE-EDLDGADLVFAAT 68 (103)
T ss_dssp -TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE----HHHH-----TSCEEEESS-G-GGCTTESEEEE-S
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch----hhhh-----hHHHHHhhhHH-HHHhhheEEEecC
Confidence 5789999999 699999999999999 89999998754 1111 35566655553 5566788777544
No 428
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.24 E-value=0.0051 Score=49.72 Aligned_cols=74 Identities=20% Similarity=0.167 Sum_probs=46.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccc----c-CCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----L-IEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~-~~~d~vi~~a 105 (190)
.+.+|||+||+|.+|...++.+...+...|.+..+ +++.. .+..+....-+.+..-|+.+.. . .++|+|+...
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s-~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-SEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence 47999999999999999999999993344444444 33322 3333332223333333433321 1 2599999998
Q ss_pred C
Q 029640 106 C 106 (190)
Q Consensus 106 g 106 (190)
|
T Consensus 220 G 220 (326)
T COG0604 220 G 220 (326)
T ss_pred C
Confidence 6
No 429
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.12 E-value=0.0098 Score=50.01 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=43.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
|+|.|+||.|.+|.++++.|.+. |++|.+.+|+.+........ .++.. ..|. .....++|+||-+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~----~gv~~-~~~~-~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKE----LGVEY-ANDN-IDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHH----cCCee-ccCH-HHHhccCCEEEEec
Confidence 57999999999999999999998 78999998864332221111 12221 1121 12345689988876
No 430
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.12 E-value=0.018 Score=45.56 Aligned_cols=37 Identities=14% Similarity=0.260 Sum_probs=32.9
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
.+.|++++|+|+++.+|+.++..|.++ +..|+++.++
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~ 191 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSR 191 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCC
Confidence 468999999999999999999999998 7888888664
No 431
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.11 E-value=0.096 Score=44.08 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=49.8
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
.+++++|+|. |.+|..+++.|.++ |+.|.+.+...... ....+.. ..++.+......+....++|.||...|+.
T Consensus 4 ~~~~~~v~G~-g~~G~~~a~~l~~~-g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~~~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 4 QNKKILVAGL-GGTGISMIAYLRKN-GAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLKDALDNGFDILALSPGIS 78 (445)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence 5689999995 68999999999999 88999987654421 1112211 12455554443333345789999998864
No 432
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.11 E-value=0.044 Score=46.76 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=49.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
..+++|+|.| .|-.|...++.|... |.+|++.+++... ...+. ..++.++..+-....+.++|+||...|+..
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~----~~~l~-~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDA----LRPHA-ERGVATVSTSDAVQQIADYALVVTSPGFRP 82 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHH----HHHHH-hCCCEEEcCcchHhHhhcCCEEEECCCCCC
Confidence 3678999999 889999999988888 8999998864322 22221 124445433322233456899999998653
No 433
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.07 E-value=0.09 Score=44.66 Aligned_cols=75 Identities=11% Similarity=0.019 Sum_probs=49.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
.+++|+|.| -|--|...++.|.+. |.+|++.+.+..........+.. .+..+...-....+.++|.||...|+..
T Consensus 7 ~~~~v~v~G-~G~sG~~~~~~l~~~-g~~v~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~d~vV~SpgI~~ 81 (468)
T PRK04690 7 EGRRVALWG-WGREGRAAYRALRAH-LPAQALTLFCNAVEAREVGALAD--AALLVETEASAQRLAAFDVVVKSPGISP 81 (468)
T ss_pred CCCEEEEEc-cchhhHHHHHHHHHc-CCEEEEEcCCCcccchHHHHHhh--cCEEEeCCCChHHccCCCEEEECCCCCC
Confidence 578999999 588999999999999 89999988544322222222221 2233333222233457899999988653
No 434
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.04 E-value=0.0043 Score=45.65 Aligned_cols=38 Identities=21% Similarity=0.154 Sum_probs=33.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG 69 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~ 69 (190)
+.+++|.|.| .|-||+.+++.|..- |.+|.+.+|....
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~ 71 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKP 71 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHH
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCCh
Confidence 4789999999 899999999999998 8999999986553
No 435
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.04 E-value=0.037 Score=44.37 Aligned_cols=104 Identities=11% Similarity=0.073 Sum_probs=60.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCC---eEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
.+|.| |+||-+|+.+.+.|.++ .. ++.++.....-....+. + .+-.+..-++.+..+.++|++|. +|..
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer-~fpv~~l~l~~s~~~s~gk~i~--f--~g~~~~V~~l~~~~f~~vDia~f-ag~~- 75 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQS-DLEIEQISIVEIEPFGEEQGIR--F--NNKAVEQIAPEEVEWADFNYVFF-AGKM- 75 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhc-CCchhheeecccccccCCCEEE--E--CCEEEEEEECCccCcccCCEEEE-cCHH-
Confidence 57999 99999999999999888 43 34443322011111111 1 12233334666667789999998 7521
Q ss_pred CcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCCCCC
Q 029640 110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDE 161 (190)
Q Consensus 110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~~~e 161 (190)
........+.+.|+.+|=-||..=+.++-+..+.|
T Consensus 76 -----------------~s~~~ap~a~~aG~~VIDnSsa~Rmd~dVPLVVPE 110 (322)
T PRK06901 76 -----------------AQAEHLAQAAEAGCIVIDLYGICAALANVPVVVPS 110 (322)
T ss_pred -----------------HHHHHHHHHHHCCCEEEECChHhhCCCCCCeeccc
Confidence 12345556777787777666655444433333333
No 436
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.01 E-value=0.012 Score=49.24 Aligned_cols=75 Identities=16% Similarity=0.294 Sum_probs=48.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
..+++++|.| +|.+|..+++.|...+..+|++..|+.+........+ +...+..+-......+.|+||.+.+...
T Consensus 178 l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~----g~~~i~~~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 178 LKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL----GGEAVKFEDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred ccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----CCeEeeHHHHHHHHhhCCEEEECCCCCC
Confidence 4679999999 5999999999999983378999988654332222221 1122222211233457999999976443
No 437
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.00 E-value=0.051 Score=34.86 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=29.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r 65 (190)
+.+++++|.|. |.+|+.++..|.+.++.++.+.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999995 999999999999985567777655
No 438
>PLN00203 glutamyl-tRNA reductase
Probab=95.95 E-value=0.016 Score=49.70 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=50.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
+.+++|+|.|+ |-+|..+++.|...+-.+|+++.|+.+........+ +...+.+...+-......+.|+||.+.+...
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~-~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF-PDVEIIYKPLDEMLACAAEADVVFTSTSSET 341 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh-CCCceEeecHhhHHHHHhcCCEEEEccCCCC
Confidence 35799999995 999999999999983357999988655443332222 1112222222222234567999999876444
Q ss_pred C
Q 029640 110 P 110 (190)
Q Consensus 110 ~ 110 (190)
+
T Consensus 342 p 342 (519)
T PLN00203 342 P 342 (519)
T ss_pred C
Confidence 3
No 439
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.95 E-value=0.015 Score=46.00 Aligned_cols=77 Identities=13% Similarity=0.103 Sum_probs=47.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEeccccc--cccCCcCEEEEccCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTE--PLLIEVDQIYHLACP 107 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~--~~~~~~d~vi~~ag~ 107 (190)
.+++++|.| +|..|++++-.|++.+-.+++++.|..++.......+... ........+..+ .....+|+|||+-..
T Consensus 126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~ 204 (283)
T PRK14027 126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCC
Confidence 568999999 6999999999999984468999988755444333222111 110011123221 123468999998754
Q ss_pred C
Q 029640 108 A 108 (190)
Q Consensus 108 ~ 108 (190)
.
T Consensus 205 G 205 (283)
T PRK14027 205 G 205 (283)
T ss_pred C
Confidence 3
No 440
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.94 E-value=0.039 Score=43.86 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=30.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT 68 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~ 68 (190)
..+++++|.|+ |..+++++..|+..+-.++.++.|+.+
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 36789999995 666999999999984468999999753
No 441
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=95.90 E-value=0.12 Score=40.49 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=27.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~ 64 (190)
++|.|.|++|.+|+.+++.+.+..+.++....
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~ 33 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAF 33 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 68999999999999999999987566666543
No 442
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=95.85 E-value=0.076 Score=41.65 Aligned_cols=71 Identities=20% Similarity=0.178 Sum_probs=41.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
|++|.|.| .|.||+.+++.|.+..+.++..+...... .......... .+.. ..|+.+. ..++|+|+-|++.
T Consensus 1 m~rVgIiG-~G~iG~~~~~~l~~~~~~~l~~v~~~~~~-~~~~~~~~~~-~~~~-~~d~~~l-~~~~DvVve~t~~ 71 (265)
T PRK13303 1 MMKVAMIG-FGAIGAAVLELLEHDPDLRVDWVIVPEHS-IDAVRRALGE-AVRV-VSSVDAL-PQRPDLVVECAGH 71 (265)
T ss_pred CcEEEEEC-CCHHHHHHHHHHhhCCCceEEEEEEcCCC-HHHHhhhhcc-CCee-eCCHHHh-ccCCCEEEECCCH
Confidence 36899999 59999999999988745555554422221 1111111111 2222 2344333 4568999999864
No 443
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.84 E-value=0.082 Score=40.36 Aligned_cols=70 Identities=10% Similarity=0.161 Sum_probs=53.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
++++|+|.| +|-++..=++.|++. +.+|+++... ....+..+.....+.+.+-+.....+.+.+.||-+.
T Consensus 24 ~~~~VLVVG-GG~VA~RK~~~Ll~~-gA~VtVVap~---i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIG-GGKAAFIKGKTFLKK-GCYVYILSKK---FSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIAT 93 (223)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCC---CCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECC
Confidence 578999999 799999999999998 8899998643 223344455566889988777666667777777664
No 444
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.84 E-value=0.017 Score=37.64 Aligned_cols=65 Identities=23% Similarity=0.266 Sum_probs=40.5
Q ss_pred EEEEEcccchHHHHHHHHHHhcCC---CeEEEE-cCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEK---NEVIVV-DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~---~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
|+.|+| +|-+|..+++.|++. + ++|.+. .|+++....... .-.+.....|.. +.....|+||.+.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~-g~~~~~v~~~~~r~~~~~~~~~~----~~~~~~~~~~~~-~~~~~advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLAS-GIKPHEVIIVSSRSPEKAAELAK----EYGVQATADDNE-EAAQEADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHT-TS-GGEEEEEEESSHHHHHHHHH----HCTTEEESEEHH-HHHHHTSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHC-CCCceeEEeeccCcHHHHHHHHH----hhccccccCChH-HhhccCCEEEEEE
Confidence 577886 999999999999999 7 888855 664443322222 112333322222 2334689999887
No 445
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.83 E-value=0.1 Score=39.53 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=50.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEc
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL 104 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ 104 (190)
+.+++|+|.| +|-+|..=++.|++. |.+|+++.... ...+..+....++.++..+.......+.+.||-+
T Consensus 10 l~~k~VlvvG-gG~va~rKa~~ll~~-ga~v~Vvs~~~---~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaA 79 (210)
T COG1648 10 LEGKKVLVVG-GGSVALRKARLLLKA-GADVTVVSPEF---EPELKALIEEGKIKWIEREFDAEDLDDAFLVIAA 79 (210)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHhc-CCEEEEEcCCc---cHHHHHHHHhcCcchhhcccChhhhcCceEEEEe
Confidence 4789999999 899999999999999 88999987654 4555666666677777644433344444544433
No 446
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.80 E-value=0.018 Score=48.28 Aligned_cols=75 Identities=23% Similarity=0.302 Sum_probs=47.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
..+++++|+| +|-+|..+++.|...+..+|++..|+..........+ + ...+..+-......+.|+||.+.+...
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-g---~~~~~~~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-G---GEAIPLDELPEALAEADIVISSTGAPH 254 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-C---CcEeeHHHHHHHhccCCEEEECCCCCC
Confidence 4679999999 6999999999999883248888888654433222221 1 122221111223457899999986443
No 447
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=95.79 E-value=0.19 Score=42.18 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=62.2
Q ss_pred EEEEEcccchHHHHHHHHHHhcCC-----CeEEEEcCCCCCChhhh----------------------hhhhcCCceEEE
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEK-----NEVIVVDNYFTGSKDNL----------------------RKWIGHPRFELI 86 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~-----~~v~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~ 86 (190)
+|+|.| .|.||.++++.|+..|- .++.+++.+.-...+.- ..+-+..++..+
T Consensus 1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~ 79 (435)
T cd01490 1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL 79 (435)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence 588999 89999999999999943 47888766532221111 111112344555
Q ss_pred eccccc--------cccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 87 RHDVTE--------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 87 ~~D~~~--------~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
...+.. .-+.++|+||++.- |..+-..+-+.|...++.+|..++.+.+|
T Consensus 80 ~~~v~~~~~~~~~~~f~~~~DvVi~alD-----------------n~~aR~~vn~~C~~~~iPli~~gt~G~~G 136 (435)
T cd01490 80 QNRVGPETEHIFNDEFWEKLDGVANALD-----------------NVDARMYVDRRCVYYRKPLLESGTLGTKG 136 (435)
T ss_pred ecccChhhhhhhhHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCEEEEeccccee
Confidence 443321 11346888888752 12222356678888888888888766555
No 448
>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.
Probab=95.76 E-value=0.16 Score=42.66 Aligned_cols=106 Identities=10% Similarity=0.117 Sum_probs=64.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh----------------------hhhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|.++++.|+..|=..+++++...-...+ .+.++-+...+.++.
T Consensus 18 L~~s~VlliG-~gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~ 96 (425)
T cd01493 18 LESAHVCLLN-ATATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVE 96 (425)
T ss_pred HhhCeEEEEc-CcHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3668999999 66699999999999943677777654221111 011111123344444
Q ss_pred ccccc------cccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCC
Q 029640 88 HDVTE------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153 (190)
Q Consensus 88 ~D~~~------~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~ 153 (190)
-++.+ .-+.++|+||.+-. +. .....+.+.|.+.++.+|+++|.+.||.
T Consensus 97 e~~~~ll~~~~~f~~~fdiVI~t~~---------~~--------~~~~~L~~~c~~~~iPlI~~~s~G~~G~ 151 (425)
T cd01493 97 ESPEALLDNDPSFFSQFTVVIATNL---------PE--------STLLRLADVLWSANIPLLYVRSYGLYGY 151 (425)
T ss_pred cccchhhhhHHHHhcCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCEEEEecccCEEE
Confidence 33321 11346788875421 11 1123466888999999999999888773
No 449
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.75 E-value=0.049 Score=39.42 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=30.2
Q ss_pred cccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC
Q 029640 28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF 67 (190)
Q Consensus 28 ~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~ 67 (190)
..+.||+++|.|.+..+|+.++..|.++ +..|.+.....
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~-~atVt~~h~~T 70 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNK-GATVTICHSKT 70 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHT-T-EEEEE-TTS
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhC-CCeEEeccCCC
Confidence 3468999999999999999999999999 88888876543
No 450
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.74 E-value=0.11 Score=44.06 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=48.4
Q ss_pred CCCEEEEEcccchHHHH-HHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 31 SNMRILVTGGAGFIGSH-LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~-l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
.+++|+|.| -|..|.. +++.|.++ |++|++.+.+.... ...+. ..++.+.... ....+.++|.||...|+..
T Consensus 6 ~~~~v~viG-~G~sG~s~~a~~L~~~-G~~V~~~D~~~~~~---~~~l~-~~gi~~~~~~-~~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 6 RIKRIHFVG-IGGIGMSGLAEVLLNL-GYKVSGSDLKESAV---TQRLL-ELGAIIFIGH-DAENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCEEEEEE-EchhhHHHHHHHHHhC-CCeEEEECCCCChH---HHHHH-HCCCEEeCCC-CHHHCCCCCEEEECCCCCC
Confidence 568899999 6679999 79999998 89999998765432 22222 2245554322 2233447899999988643
No 451
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=95.72 E-value=0.038 Score=34.79 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=31.0
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS 70 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~ 70 (190)
+++|.| +|++|-.++..|... +.+|+++.|.+...
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~-g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAEL-GKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHT-TSEEEEEESSSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHh-CcEEEEEeccchhh
Confidence 578888 899999999999998 89999998877655
No 452
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.71 E-value=0.0076 Score=43.55 Aligned_cols=72 Identities=19% Similarity=0.237 Sum_probs=42.0
Q ss_pred ccccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 27 ~~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
..++.+|+++|+| -|++|+.+++.|... |..|++...++... ++... ..+... + .++.....|++|.+-|
T Consensus 18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~a---lqA~~--dGf~v~--~-~~~a~~~adi~vtaTG 87 (162)
T PF00670_consen 18 NLMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRA---LQAAM--DGFEVM--T-LEEALRDADIFVTATG 87 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHH---HHHHH--TT-EEE----HHHHTTT-SEEEE-SS
T ss_pred ceeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHH---HHhhh--cCcEec--C-HHHHHhhCCEEEECCC
Confidence 4456899999999 999999999999999 89999987744222 21111 233332 1 2334566788888776
Q ss_pred CC
Q 029640 107 PA 108 (190)
Q Consensus 107 ~~ 108 (190)
..
T Consensus 88 ~~ 89 (162)
T PF00670_consen 88 NK 89 (162)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 453
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.65 E-value=0.032 Score=40.32 Aligned_cols=65 Identities=22% Similarity=0.191 Sum_probs=40.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
|++|.+.| .|-+|+.+++.|++. +++|.+.+|+++.. ..+... .... +|-..+...++|+||-+.
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~----~~~~~~-g~~~--~~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKA----EALAEA-GAEV--ADSPAEAAEQADVVILCV 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHH----HHHHHT-TEEE--ESSHHHHHHHBSEEEE-S
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhh----hhhHHh-hhhh--hhhhhhHhhcccceEeec
Confidence 57899999 899999999999999 89999998854332 222222 2222 222223334567777665
No 454
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.62 E-value=0.04 Score=43.89 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=34.4
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT 68 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~ 68 (190)
.+.|++|.|.|.+|.+|+.++..|+++ |+.|++..|+..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~-gatVtv~~~~t~ 194 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQA-HCSVTVVHSRST 194 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEECCCCC
Confidence 458999999999999999999999999 899999866543
No 455
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.57 E-value=0.026 Score=47.15 Aligned_cols=67 Identities=16% Similarity=0.111 Sum_probs=45.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
+.+++++|+| .|.||+.+++.|... |.+|+++.+++........ .++... ++ ++...+.|+||.+.|
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~-----~G~~v~--~l-~eal~~aDVVI~aTG 276 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAM-----DGFRVM--TM-EEAAELGDIFVTATG 276 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHh-----cCCEec--CH-HHHHhCCCEEEECCC
Confidence 5789999999 799999999999999 7899998876543221111 122221 22 233457888888765
No 456
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=95.49 E-value=0.06 Score=45.64 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=47.8
Q ss_pred cCCCEEEEEcc----------------cchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccc--
Q 029640 30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91 (190)
Q Consensus 30 ~~~~~vlItG~----------------~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-- 91 (190)
+.|++|+||+| ||-.|.+|++.+..+ |++|+++.-..... ....+..+..+-.
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~-GA~VtlI~Gp~~~~--------~p~~v~~i~V~ta~e 324 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAA-GAEVTLISGPVDLA--------DPQGVKVIHVESARQ 324 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHC-CCcEEEEeCCcCCC--------CCCCceEEEecCHHH
Confidence 58999999975 799999999999999 89998885321110 1223444433222
Q ss_pred --ccc--cCCcCEEEEccCCCC
Q 029640 92 --EPL--LIEVDQIYHLACPAS 109 (190)
Q Consensus 92 --~~~--~~~~d~vi~~ag~~~ 109 (190)
+.. ....|++|++|++.+
T Consensus 325 M~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 325 MLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHhhCCCCEEEEeccccc
Confidence 211 124799999998765
No 457
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=95.47 E-value=0.13 Score=42.41 Aligned_cols=33 Identities=36% Similarity=0.425 Sum_probs=30.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF 67 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~ 67 (190)
|+|.|.| +||+|...+--|++. ||+|++++..+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~-GHeVv~vDid~ 33 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAEL-GHEVVCVDIDE 33 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHc-CCeEEEEeCCH
Confidence 6899999 999999999999999 89999998753
No 458
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.41 E-value=0.062 Score=42.53 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=32.6
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
.+.|++++|.|.+..+|+-++..|+++ +..|+++-++
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~ 192 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRF 192 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECC
Confidence 358999999999999999999999998 7888887654
No 459
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.36 E-value=0.051 Score=44.00 Aligned_cols=76 Identities=14% Similarity=0.017 Sum_probs=48.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHh-cCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
.++++|.| +|..|++.+..|.. .+..+|.+..|+.+........+.....+.+...+-.+....+.|+||++....
T Consensus 132 ~~~v~IiG-aG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~ 208 (330)
T PRK08291 132 ASRAAVIG-AGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSE 208 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCC
Confidence 47899999 78889999898886 434789999987665555444332222333333332233445789998887543
No 460
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.35 E-value=0.099 Score=41.56 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=32.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF 67 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~ 67 (190)
..+.+++|+|++|.+|..+++.+... |..|+++.+++
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCH
Confidence 35789999999999999999999998 78888887654
No 461
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=95.34 E-value=0.012 Score=44.85 Aligned_cols=121 Identities=12% Similarity=0.007 Sum_probs=76.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHH-----hc---CCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLM-----EN---EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIY 102 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~-----~~---~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi 102 (190)
++++.++-+++|+|+..|..... +- ..|.|+++.|.+... +++|-..|..-.. ..|+..+
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------ritw~el~~~Gip-~sc~a~v 78 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------RITWPELDFPGIP-ISCVAGV 78 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------ccccchhcCCCCc-eehHHHH
Confidence 44667788899999988776332 21 137899999865543 4455444433211 1355555
Q ss_pred EccCCC----CCcccccCchhHHHHHHHHHHHHHHHHHHcCC---eEEEEecceecCCCCCCCCCCCC
Q 029640 103 HLACPA----SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESY 163 (190)
Q Consensus 103 ~~ag~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~i~vSS~~~~~~~~~~~~~e~~ 163 (190)
|.+|.. -..|+++-..+++.-.+..+..++++..+.+. ..|++|...+|-+.....|+|++
T Consensus 79 na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~ 146 (315)
T KOG3019|consen 79 NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKI 146 (315)
T ss_pred hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccc
Confidence 555422 12333333334455556667888888887762 59999999999988888899984
No 462
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.32 E-value=0.058 Score=45.96 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=45.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEe-ccccccccCCcCEEEEccCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~d~vi~~ag~ 107 (190)
+.+++++|+| +|.+|+.++..|.+. |.+|.+..|+.+........ .. ..... .++. ...++|+||++...
T Consensus 330 ~~~k~vlIiG-aGgiG~aia~~L~~~-G~~V~i~~R~~~~~~~la~~-~~---~~~~~~~~~~--~l~~~DiVInatP~ 400 (477)
T PRK09310 330 LNNQHVAIVG-AGGAAKAIATTLARA-GAELLIFNRTKAHAEALASR-CQ---GKAFPLESLP--ELHRIDIIINCLPP 400 (477)
T ss_pred cCCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH-hc---cceechhHhc--ccCCCCEEEEcCCC
Confidence 4678999999 589999999999998 77888888754332222111 11 11111 1111 23578999999754
No 463
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.31 E-value=0.094 Score=37.07 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=33.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
.++|++++|.|.+.-+|+.++..|.++ +..|.+..++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~-gatV~~~~~~ 61 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRD-GATVYSCDWK 61 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeCCC
Confidence 358999999999999999999999998 8899888654
No 464
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.26 E-value=0.07 Score=42.09 Aligned_cols=65 Identities=23% Similarity=0.219 Sum_probs=41.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEcc
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA 105 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~a 105 (190)
|+|.|.| .|.+|..++..|.+. |++|.+.+|+.+.... ......+.....+. ....++|+||-+.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~----a~~~g~~~~~~~~~--~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCER----AIERGLVDEASTDL--SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHH----HHHCCCcccccCCH--hHhcCCCEEEEcC
Confidence 4799999 899999999999998 8899999885433221 11111111111111 1345688888876
No 465
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.26 E-value=0.023 Score=45.79 Aligned_cols=34 Identities=21% Similarity=0.047 Sum_probs=29.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCC-eEEEEcCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF 67 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~-~v~~~~r~~ 67 (190)
.+|+|.|++|.+|..+++.+... |. +|+++.++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~-G~~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLL-GCSRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHc-CCCEEEEEcCCH
Confidence 79999999999999999988887 76 788887643
No 466
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.25 E-value=0.059 Score=44.97 Aligned_cols=68 Identities=18% Similarity=0.163 Sum_probs=46.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
.+.+++|+|.| .|.||+.+++.+... |.+|+++.+++...... .. .++... ++ ++...+.|+||.+.|
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A-~~----~G~~~~--~~-~e~v~~aDVVI~atG 266 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQA-AM----EGYEVM--TM-EEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHH-Hh----cCCEEc--cH-HHHHcCCCEEEECCC
Confidence 35789999999 899999999999998 77898887754432211 11 122222 22 233456899998876
No 467
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.24 E-value=0.18 Score=33.87 Aligned_cols=64 Identities=25% Similarity=0.409 Sum_probs=45.8
Q ss_pred EEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccccc------CCcCEEEEcc
Q 029640 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLA 105 (190)
Q Consensus 35 vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------~~~d~vi~~a 105 (190)
|+|.| .|-+|+.+++.|.+. +..|.++.++++. ...+. ...+.++.+|..+... .+.+.||-+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~-~~~vvvid~d~~~----~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEG-GIDVVVIDRDPER----VEELR-EEGVEVIYGDATDPEVLERAGIEKADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHT-TSEEEEEESSHHH----HHHHH-HTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred eEEEc-CCHHHHHHHHHHHhC-CCEEEEEECCcHH----HHHHH-hcccccccccchhhhHHhhcCccccCEEEEcc
Confidence 57888 689999999999996 7789999875433 22222 2247899999998743 4688887776
No 468
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.24 E-value=0.092 Score=41.16 Aligned_cols=67 Identities=18% Similarity=0.294 Sum_probs=39.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhcC-CCeEE-EEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENE-KNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~-~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
+++.|.| .|.+|+.+++.|.+.+ +.++. +.+|+.+. ...+........+ .|+.+ ...++|+|+.|+.
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~----a~~~a~~~~~~~~-~~~~e-ll~~~DvVvi~a~ 70 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEK----AENLASKTGAKAC-LSIDE-LVEDVDLVVECAS 70 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHH----HHHHHHhcCCeeE-CCHHH-HhcCCCEEEEcCC
Confidence 6899999 7999999999998863 34544 44443222 1111111112211 23222 2257999999875
No 469
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.18 E-value=0.078 Score=41.97 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=32.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r 65 (190)
.+.|++++|.|.+..+|+-++..|.++ +..|+++..
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs 196 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHV 196 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEec
Confidence 358999999999999999999999998 788888754
No 470
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.18 E-value=0.067 Score=44.00 Aligned_cols=36 Identities=28% Similarity=0.230 Sum_probs=30.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
..++|+|.|.+|.||.++++.|.+..+++|++.++.
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~ 38 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA 38 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 347899999889999999999997647888888774
No 471
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.18 E-value=0.06 Score=43.52 Aligned_cols=75 Identities=8% Similarity=0.015 Sum_probs=49.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHh-cCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~ 107 (190)
.++++|+| +|..|++.++.|+. .+-.+|.+..|+.+........+.....+.+...+-..+...+.|+||++-..
T Consensus 129 ~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s 204 (326)
T TIGR02992 129 SSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPS 204 (326)
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCC
Confidence 46899999 89999999999975 42368999999776655544443222123333333223344678999988754
No 472
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.16 E-value=0.051 Score=43.91 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=48.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhc-CCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~-~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
.++++|+| +|.+|+..+..++.. +-.+|.+.+|+.+........+.....+.....+-.++...+.|+||++-...
T Consensus 127 ~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~ 203 (325)
T PRK08618 127 AKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAK 203 (325)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCC
Confidence 47899999 899999988887653 23689999887665554444332222233322322233446789999887543
No 473
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.16 E-value=0.25 Score=38.13 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=29.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
+..+|+|.| -|.+|+|.+++|++.|=.++.+++..
T Consensus 29 ~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D 63 (263)
T COG1179 29 KQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMD 63 (263)
T ss_pred hhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecc
Confidence 568899999 89999999999999943677777654
No 474
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.13 E-value=0.12 Score=41.22 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=57.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChh-hhhhhhcCCceEEEecccc----ccccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDVT----EPLLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~----~~~~~~~d~vi~~a 105 (190)
+..++.|.| +|.||..++..+.+..+.++..+...+..... ..... .++.....|+. +..+.++|+||.+.
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~---~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARR---LGVATSAEGIDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHH---cCCCcccCCHHHHHhCcCCCCCCEEEECC
Confidence 457899999 99999999988887645666655433322211 11111 12222211211 22346799999887
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
+.. ........+.+.|+++|--+++.
T Consensus 79 ~a~------------------~H~e~a~~a~eaGk~VID~sPA~ 104 (302)
T PRK08300 79 SAG------------------AHVRHAAKLREAGIRAIDLTPAA 104 (302)
T ss_pred CHH------------------HHHHHHHHHHHcCCeEEECCccc
Confidence 521 12345666777787777766655
No 475
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.12 E-value=0.085 Score=42.41 Aligned_cols=65 Identities=14% Similarity=0.155 Sum_probs=44.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceE-EEeccccccccCCcCEEEEccC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFE-LIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~d~vi~~ag 106 (190)
+.++++.|.| .|.||+.+++.|... |.+|.+.+|..+... .+. +...+-.++.+.++|+|+.+..
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~----------~~~~~~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP----------GVQSFAGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC----------CceeecccccHHHHHhcCCEEEECCC
Confidence 4789999999 999999999999988 899999887543211 111 1112222334457888877763
No 476
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.10 E-value=0.039 Score=40.88 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=26.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF 67 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~ 67 (190)
|+|.|.| .||+|..++..|++. |++|++++.++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~-G~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEK-GHQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHT-TSEEEEE-S-H
T ss_pred CEEEEEC-CCcchHHHHHHHHhC-CCEEEEEeCCh
Confidence 7899998 999999999999999 89999998753
No 477
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.09 E-value=0.077 Score=44.14 Aligned_cols=75 Identities=17% Similarity=0.270 Sum_probs=55.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS 109 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~~ 109 (190)
+.+++++|.| .|-+|.-+++.|..++-..|++..|..+.......++ +...+..|-........|+||-+-|...
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~----~~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL----GAEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh----CCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence 4789999999 8999999999999994488999988665544433332 3455555555556678999999876444
No 478
>PLN02494 adenosylhomocysteinase
Probab=95.07 E-value=0.069 Score=45.16 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=33.8
Q ss_pred cccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC
Q 029640 28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG 69 (190)
Q Consensus 28 ~~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~ 69 (190)
..+.+++++|+| .|.||+.+++.+... |.+|+++.+++..
T Consensus 250 i~LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r 289 (477)
T PLN02494 250 VMIAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPIC 289 (477)
T ss_pred CccCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchh
Confidence 345789999999 899999999999988 7899998776543
No 479
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.07 E-value=0.065 Score=42.24 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=43.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
+++++|.| +|..+++++..|.+.+..+|.++.|+.+........+ .+.+. .++ .....|+|||+-.
T Consensus 122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~----~~~~~-~~~---~~~~~dlvINaTp 187 (272)
T PRK12550 122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY----GYEWR-PDL---GGIEADILVNVTP 187 (272)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh----CCcch-hhc---ccccCCEEEECCc
Confidence 46899999 6999999999999984457999999765443322221 11110 011 1245899999964
No 480
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.07 E-value=0.34 Score=38.55 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=26.8
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
+|+|.| .|.+|.++++.|+..|-.++.+++.+
T Consensus 1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D 32 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMD 32 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 588999 89999999999999954678887654
No 481
>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional
Probab=95.06 E-value=0.42 Score=38.84 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=55.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhcC-CCeEEEEcCCCCCChhhhhhhhc----------------------CCceEEEe-c
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIG----------------------HPRFELIR-H 88 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~-~~~v~~~~r~~~~~~~~~~~~~~----------------------~~~~~~~~-~ 88 (190)
.+|.|-|. |-||+.+.+.|.+++ ..++.++.-++....+.+..++. ...+...+ -
T Consensus 2 ~~IaInGf-GrIGR~~lr~l~e~~~~~~l~vvaind~~~~~~~ayll~ydS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (336)
T PRK13535 2 IRVAINGF-GRIGRNVLRALYESGRRAEITVVAINELADAEGMAHLLKYDTSHGRFAWDVRQERDQLFVGDDAIRLLHER 80 (336)
T ss_pred eEEEEECc-CHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHhhhccCCCCCCCcEEecCCEEEECCEEEEEEEcC
Confidence 57999998 999999999999862 13455553332222222222211 11222321 1
Q ss_pred ccccccc--CCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecce
Q 029640 89 DVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149 (190)
Q Consensus 89 D~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~ 149 (190)
|..+... .++|+||-|+|... +...+....+.|.+.|.+|+..
T Consensus 81 ~p~~~~w~~~gvDiVle~tG~~~------------------s~~~a~~~l~aGAk~V~iSap~ 125 (336)
T PRK13535 81 DIASLPWRELGVDVVLDCTGVYG------------------SREDGEAHIAAGAKKVLFSHPG 125 (336)
T ss_pred CcccCcccccCCCEEEEccchhh------------------hHHHHHHHHHcCCEEEEecCCc
Confidence 3333323 57999999997432 1234444555678888888764
No 482
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.05 E-value=0.18 Score=40.02 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=32.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCCh
Q 029640 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71 (190)
Q Consensus 33 ~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~ 71 (190)
++|.|.| .|.+|..++..|+.. |++|++.+++++..+
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a~~-G~~V~l~d~~~~~~~ 42 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCARA-GVDVLVFETTEELAT 42 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHHhC-CCEEEEEECCHHHHH
Confidence 5899999 699999999999999 899999998766544
No 483
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.97 E-value=0.09 Score=41.89 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=32.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEc
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~ 64 (190)
.+.|++|+|.|.++.+|+.++..|++. ++.|++..
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~ 189 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAH 189 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEEC
Confidence 368999999999999999999999998 89999884
No 484
>PRK14851 hypothetical protein; Provisional
Probab=94.97 E-value=0.49 Score=42.12 Aligned_cols=102 Identities=9% Similarity=0.029 Sum_probs=62.6
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+.+.+|+|.| .|.+|..++..|+..|-.++.+++.+.-...+. +.++-+..+++.+.
T Consensus 41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 3678999999 899999999999999546777765442111111 11111223566665
Q ss_pred ccccccc----cCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 029640 88 HDVTEPL----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147 (190)
Q Consensus 88 ~D~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS 147 (190)
..+.... +.++|+||.+.-.. . +..-..+.+.|.+.++.+|..+.
T Consensus 120 ~~i~~~n~~~~l~~~DvVid~~D~~---------~------~~~r~~l~~~c~~~~iP~i~~g~ 168 (679)
T PRK14851 120 AGINADNMDAFLDGVDVVLDGLDFF---------Q------FEIRRTLFNMAREKGIPVITAGP 168 (679)
T ss_pred cCCChHHHHHHHhCCCEEEECCCCC---------c------HHHHHHHHHHHHHCCCCEEEeec
Confidence 5555332 35799998776210 0 11112466788888888887664
No 485
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=94.97 E-value=0.2 Score=39.45 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=56.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhc-CCCeEEEE-cCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccCCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVV-DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~-~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
+.++|.|.| .|.||+.+++.|.+. .+.++..+ +|+.+. ...+.... .......|+.+ ...++|+|+-++...
T Consensus 5 ~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~-a~~~a~~~---g~~~~~~~~ee-ll~~~D~Vvi~tp~~ 78 (271)
T PRK13302 5 PELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQR-HADFIWGL---RRPPPVVPLDQ-LATHADIVVEAAPAS 78 (271)
T ss_pred CeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHH-HHHHHHhc---CCCcccCCHHH-HhcCCCEEEECCCcH
Confidence 457899999 899999999999873 46676644 443222 11111111 11111122222 234689998887532
Q ss_pred CCccc-c---cCchhHHHHH---HHHHHHHHHHHHHcCCeEEEEe
Q 029640 109 SPIFY-K---YNPVKTIKTN---VIGTLNMLGLAKRVGARILLTS 146 (190)
Q Consensus 109 ~~~~~-~---~~~~~~~~~n---~~~~~~l~~~~~~~~~~~i~vS 146 (190)
..... . .....++... +.-...+.+++++++.++...|
T Consensus 79 ~h~e~~~~aL~aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l~v~s 123 (271)
T PRK13302 79 VLRAIVEPVLAAGKKAIVLSVGALLRNEDLIDLARQNGGQIIVPT 123 (271)
T ss_pred HHHHHHHHHHHcCCcEEEecchhHHhHHHHHHHHHHcCCEEEEcc
Confidence 21000 0 0000011011 1124677788888887765543
No 486
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.97 E-value=0.12 Score=43.53 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=49.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccc------cCCcCEEEE
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------LIEVDQIYH 103 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------~~~~d~vi~ 103 (190)
..++++|.| .|.+|+.+++.|.+. +++|.++.++++. ...+.. ...+..+.+|.++.. ..+.|.||-
T Consensus 230 ~~~~iiIiG-~G~~g~~l~~~L~~~-~~~v~vid~~~~~----~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 230 PVKRVMIVG-GGNIGYYLAKLLEKE-GYSVKLIERDPER----AEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHH----HHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence 468899999 599999999999998 8899999875432 222211 135677888988764 235788775
Q ss_pred cc
Q 029640 104 LA 105 (190)
Q Consensus 104 ~a 105 (190)
+.
T Consensus 304 ~~ 305 (453)
T PRK09496 304 LT 305 (453)
T ss_pred CC
Confidence 54
No 487
>PRK14852 hypothetical protein; Provisional
Probab=94.96 E-value=0.45 Score=43.84 Aligned_cols=107 Identities=11% Similarity=0.014 Sum_probs=64.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhh----------------------hhhhhcCCceEEEe
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR 87 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~ 87 (190)
+...+|+|.| .|.+|..++..|+..|-.++.+++.+.-...+. +.++-+..++..+.
T Consensus 330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 3668999999 899999999999999545777765542221111 11111123555555
Q ss_pred cccccc----ccCCcCEEEEccCCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecC
Q 029640 88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152 (190)
Q Consensus 88 ~D~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~ 152 (190)
..+..+ -+.++|+||.+.-... +..-..+.+.|.+.++.+|..++.+.+|
T Consensus 409 ~~I~~en~~~fl~~~DiVVDa~D~~~---------------~~~rr~l~~~c~~~~IP~I~ag~~G~~g 462 (989)
T PRK14852 409 EGVAAETIDAFLKDVDLLVDGIDFFA---------------LDIRRRLFNRALELGIPVITAGPLGYSC 462 (989)
T ss_pred cCCCHHHHHHHhhCCCEEEECCCCcc---------------HHHHHHHHHHHHHcCCCEEEeeccccCe
Confidence 444332 2357899987762110 1112345667888888999888755333
No 488
>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.94 E-value=0.4 Score=40.37 Aligned_cols=75 Identities=24% Similarity=0.192 Sum_probs=48.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcC-CceEEEeccccccccCCcCEEEEccCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
+....|+|.| -|..|..+++.|.+. |++|.+.+...... ....+... .++.+....-....+.++|.||...|+.
T Consensus 4 ~~~~~~~v~G-~G~sG~s~a~~L~~~-G~~v~~~D~~~~~~--~~~~l~~~~~g~~~~~~~~~~~~~~~~d~vV~sp~i~ 79 (448)
T PRK03803 4 QSDGLHIVVG-LGKTGLSVVRFLARQ-GIPFAVMDSREQPP--GLDTLAREFPDVELRCGGFDCELLVQASEIIISPGLA 79 (448)
T ss_pred ccCCeEEEEe-ecHhHHHHHHHHHhC-CCeEEEEeCCCCch--hHHHHHhhcCCcEEEeCCCChHHhcCCCEEEECCCCC
Confidence 4567899999 677999999999998 89999998754321 11122111 2455544322222345689999988764
No 489
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.94 E-value=0.048 Score=44.26 Aligned_cols=66 Identities=17% Similarity=0.069 Sum_probs=44.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEeccccccccCCcCEEEEccC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC 106 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi~~ag 106 (190)
+.++++.|.| .|.||+.+++.|... |.+|.+.+|...... ... ..+.+ .+ .++.+.+.|+|+.+.-
T Consensus 148 L~gktvgIiG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~~--~~~----~~~~~--~~-l~ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIG-FGRIGQAVARRAKGF-GMRILYYSRTRKPEA--EKE----LGAEY--RP-LEELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCChhh--HHH----cCCEe--cC-HHHHHhhCCEEEEeCC
Confidence 4789999999 899999999999988 889999888543211 110 01121 12 2234567898877763
No 490
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=94.93 E-value=0.27 Score=39.12 Aligned_cols=108 Identities=12% Similarity=-0.000 Sum_probs=64.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEe-cccccc----ccCCcCEEEEcc
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDVTEP----LLIEVDQIYHLA 105 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~D~~~~----~~~~~d~vi~~a 105 (190)
++.+++|.||+|.+|+-+-+.-.-. |+.|+...-++++..-...++.-...+.+-. .|+... .-.++|+-|-|.
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~-Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV 231 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV 231 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhc-CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence 5789999999999999888877777 8888887654443322211111111111111 011110 113589999888
Q ss_pred CCCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCCCCCC
Q 029640 106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHP 158 (190)
Q Consensus 106 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~~~~~ 158 (190)
|... ...++..++.++ |+++++-.+.|..+.+.+
T Consensus 232 GG~~------------------lDavl~nM~~~g-ri~~CG~ISqYN~~~~~~ 265 (343)
T KOG1196|consen 232 GGKM------------------LDAVLLNMNLHG-RIAVCGMISQYNLENPEG 265 (343)
T ss_pred CcHH------------------HHHHHHhhhhcc-ceEeeeeehhccccCCcc
Confidence 6321 123445555555 999999988887654433
No 491
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.93 E-value=0.12 Score=37.44 Aligned_cols=33 Identities=33% Similarity=0.476 Sum_probs=27.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r 65 (190)
..+|+|.||-|.+|+++++.+..+ ++-|.-++-
T Consensus 3 agrVivYGGkGALGSacv~~Fkan-nywV~siDl 35 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKAN-NYWVLSIDL 35 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhc-CeEEEEEee
Confidence 468999999999999999999998 666555544
No 492
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=94.89 E-value=0.05 Score=44.87 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=31.9
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~ 66 (190)
..++|.|.||.|.+|..+++.|.+. |+.|.+.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~-G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS-GYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC-CCeEEEeCCC
Confidence 4588999999999999999999999 8999999874
No 493
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.88 E-value=0.097 Score=41.44 Aligned_cols=36 Identities=14% Similarity=0.252 Sum_probs=31.8
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r 65 (190)
.+.|++++|.|.++.+|+.++..|.++ +..|+++-+
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs 190 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHS 190 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecC
Confidence 358999999999999999999999998 788887644
No 494
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=94.85 E-value=0.041 Score=44.33 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=31.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCC
Q 029640 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF 67 (190)
Q Consensus 30 ~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~ 67 (190)
..+.+++|+|++|.+|..+++.+... |.+|+++.++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCH
Confidence 46789999999999999999988888 77888877653
No 495
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.84 E-value=0.033 Score=45.85 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=44.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecc--ccccccCCcCEEEEccCC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD--VTEPLLIEVDQIYHLACP 107 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--~~~~~~~~~d~vi~~ag~ 107 (190)
...+++|+| .|-+|+.+++.+... |.+|++++|+...... +...... .+.....+ .......+.|+||++++.
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~-l~~~~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQ-LDAEFGG-RIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHH-HHHhcCc-eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 446799998 589999999999999 7789999885433221 1111111 11111111 111223579999999854
No 496
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.83 E-value=0.33 Score=40.93 Aligned_cols=72 Identities=18% Similarity=0.045 Sum_probs=46.0
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhh-hhhhcCCceEEEeccccc-----cccCCcCEEEEccCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWIGHPRFELIRHDVTE-----PLLIEVDQIYHLACP 107 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~-----~~~~~~d~vi~~ag~ 107 (190)
+|+|.| .|..|...++.|.+. |+.|.+.++......... ..+. ..++.+....-.+ ....++|.||...|.
T Consensus 2 ~v~viG-~G~sG~s~a~~l~~~-G~~V~~~D~~~~~~~~~~~~~l~-~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi 78 (459)
T PRK02705 2 IAHVIG-LGRSGIAAARLLKAQ-GWEVVVSDRNDSPELLERQQELE-QEGITVKLGKPLELESFQPWLDQPDLVVVSPGI 78 (459)
T ss_pred eEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCCchhhHHHHHHHH-HcCCEEEECCccchhhhhHHhhcCCEEEECCCC
Confidence 589999 788999999999998 899999987644322211 1121 2244444322112 124568999998875
Q ss_pred C
Q 029640 108 A 108 (190)
Q Consensus 108 ~ 108 (190)
.
T Consensus 79 ~ 79 (459)
T PRK02705 79 P 79 (459)
T ss_pred C
Confidence 4
No 497
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=94.77 E-value=0.06 Score=45.54 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=32.8
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCC
Q 029640 29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT 68 (190)
Q Consensus 29 ~~~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~ 68 (190)
.+.+++++|+| .|.||+.+++.|... |.+|++..+++.
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~ 288 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPI 288 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCch
Confidence 45899999999 889999999999998 789988876543
No 498
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=94.77 E-value=0.13 Score=40.84 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=61.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhcCCceEEEecccccc----ccCCcCEEEEccC
Q 029640 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP----LLIEVDQIYHLAC 106 (190)
Q Consensus 31 ~~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~d~vi~~ag 106 (190)
.|.+|+|++|+|.+|+-+.+.-.-. |++|+.+.-.+++-.-....+.-...+++-.-|+... .-.++|+.|-|.|
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlk-G~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVG 228 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLK-GCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVG 228 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhh-CCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCC
Confidence 6789999999999999888766666 8999998654433222211111112233322333211 1246999999987
Q ss_pred CCCCcccccCchhHHHHHHHHHHHHHHHHHHcCCeEEEEecceecCCC
Q 029640 107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP 154 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i~vSS~~~~~~~ 154 (190)
... + ..++..+... .|+++++-++.|..+
T Consensus 229 g~v-----------~-------DAv~~~ln~~-aRi~~CG~IS~YN~~ 257 (340)
T COG2130 229 GEV-----------L-------DAVLPLLNLF-ARIPVCGAISQYNAP 257 (340)
T ss_pred chH-----------H-------HHHHHhhccc-cceeeeeehhhcCCC
Confidence 321 0 1122222221 389999998888865
No 499
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=94.75 E-value=0.12 Score=40.85 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=30.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCC
Q 029640 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG 69 (190)
Q Consensus 32 ~~~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~ 69 (190)
.++|+|.| .|.||+++++.|... |+.+.++.++...
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~-g~~v~i~g~d~~~ 38 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEA-GLVVRIIGRDRSA 38 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHc-CCeEEEEeecCcH
Confidence 46787777 999999999999999 8888888775444
No 500
>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase.
Probab=94.75 E-value=0.38 Score=40.30 Aligned_cols=72 Identities=18% Similarity=0.053 Sum_probs=46.2
Q ss_pred EEEEEcccchHHHHHHHHHHhcCCCeEEEEcCCCCCChhhhhhhhc-CCceEEEeccccccccCCcCEEEEccCCC
Q 029640 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLACPA 108 (190)
Q Consensus 34 ~vlItG~~G~iG~~l~~~L~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~d~vi~~ag~~ 108 (190)
++.|.| -|..|..+++.|.++ |++|.+.+............+.. ..++.+....- .....++|.||...|+.
T Consensus 1 ~~~~iG-~G~~G~a~a~~l~~~-G~~V~~sD~~~~~~~~~~~~~~~~~~gi~~~~g~~-~~~~~~~d~vv~sp~i~ 73 (433)
T TIGR01087 1 KILILG-LGKTGRAVARFLHKK-GAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLH-LEDLNNADLVVKSPGIP 73 (433)
T ss_pred CEEEEE-eCHhHHHHHHHHHHC-CCEEEEEeCCCCccchhHHHHHhhccCcEEEecCc-hHHhccCCEEEECCCCC
Confidence 378888 778999999999999 89999998765433222111111 12455543311 22345689999998864
Done!