Query 029645
Match_columns 190
No_of_seqs 135 out of 1322
Neff 8.1
Searched_HMMs 29240
Date Tue Mar 26 02:57:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g2q_A Adenine phosphoribosylt 100.0 8.3E-34 2.8E-38 220.7 19.6 176 11-187 4-183 (187)
2 2dy0_A APRT, adenine phosphori 100.0 5.7E-34 1.9E-38 222.2 18.7 182 5-186 5-189 (190)
3 1zn8_A APRT, adenine phosphori 100.0 2.4E-33 8.2E-38 216.7 18.6 175 11-185 3-180 (180)
4 1qb7_A APRT, adenine phosphori 100.0 4.6E-33 1.6E-37 223.9 18.2 177 10-186 15-207 (236)
5 1l1q_A Adenine phosphoribosylt 100.0 3.8E-32 1.3E-36 211.2 17.5 176 12-187 3-181 (186)
6 1vch_A Phosphoribosyltransfera 99.9 1.1E-26 3.6E-31 178.4 11.8 162 16-185 7-173 (175)
7 1y0b_A Xanthine phosphoribosyl 99.9 1.7E-25 5.8E-30 174.9 18.1 170 13-186 7-183 (197)
8 3m3h_A OPRT, oprtase, orotate 99.9 3.8E-26 1.3E-30 183.0 11.6 142 32-187 56-201 (234)
9 1o57_A PUR operon repressor; p 99.9 7E-25 2.4E-29 181.0 18.5 150 34-186 102-254 (291)
10 2p1z_A Phosphoribosyltransfera 99.9 3.3E-25 1.1E-29 171.3 15.0 161 11-187 8-177 (180)
11 3dez_A OPRT, oprtase, orotate 99.9 1.3E-25 4.4E-30 180.8 12.1 143 32-188 68-214 (243)
12 2yzk_A OPRT, oprtase, orotate 99.9 1.1E-24 3.6E-29 168.1 12.8 140 32-187 26-169 (178)
13 2wns_A Orotate phosphoribosylt 99.9 1.8E-24 6.1E-29 170.4 13.5 140 32-187 30-174 (205)
14 1lh0_A OMP synthase; loop clos 99.9 2.8E-24 9.5E-29 170.2 13.1 139 32-187 32-187 (213)
15 3mjd_A Orotate phosphoribosylt 99.9 4.3E-24 1.5E-28 170.8 13.6 141 31-187 49-207 (232)
16 3qw4_B UMP synthase; N-termina 99.9 8E-24 2.7E-28 184.0 15.1 167 6-187 255-428 (453)
17 3n2l_A OPRT, oprtase, orotate 99.9 2.4E-23 8.3E-28 166.8 13.5 140 32-188 57-213 (238)
18 2aee_A OPRT, oprtase, orotate 99.9 4E-23 1.4E-27 163.2 14.3 140 32-185 36-179 (211)
19 2ps1_A Orotate phosphoribosylt 99.9 3E-23 1E-27 165.6 12.2 140 32-187 36-199 (226)
20 3hvu_A Hypoxanthine phosphorib 99.8 3.1E-20 1.1E-24 145.9 14.1 134 24-166 17-157 (204)
21 1fsg_A HGPRTASE, hypoxanthine- 99.8 7.6E-20 2.6E-24 146.5 10.8 145 22-166 30-183 (233)
22 1vdm_A Purine phosphoribosyltr 99.8 4.7E-19 1.6E-23 132.8 12.9 120 40-166 4-124 (153)
23 1hgx_A HGXPRTASE, hypoxanthine 99.8 5.2E-19 1.8E-23 136.6 12.4 126 33-166 6-136 (183)
24 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 3.5E-19 1.2E-23 141.2 10.5 134 23-166 17-167 (217)
25 2jbh_A Phosphoribosyltransfera 99.8 1.3E-18 4.4E-23 138.7 11.7 132 25-166 27-175 (225)
26 3ozf_A Hypoxanthine-guanine-xa 99.8 4.1E-19 1.4E-23 143.2 8.3 141 26-166 48-197 (250)
27 2geb_A Hypoxanthine-guanine ph 99.8 5.5E-18 1.9E-22 131.1 12.8 121 37-166 12-139 (185)
28 1pzm_A HGPRT, hypoxanthine-gua 99.8 5.2E-18 1.8E-22 133.9 12.2 124 34-166 20-159 (211)
29 3o7m_A Hypoxanthine phosphorib 99.8 1.9E-17 6.4E-22 128.4 13.7 123 35-166 6-135 (186)
30 1tc1_A Protein (hypoxanthine p 99.8 2.5E-17 8.4E-22 130.8 14.7 124 36-166 6-144 (220)
31 1yfz_A Hypoxanthine-guanine ph 99.7 1.4E-17 4.8E-22 130.8 11.8 120 38-166 33-159 (205)
32 1a3c_A PYRR, pyrimidine operon 99.7 1.5E-17 5.2E-22 127.9 10.4 141 38-186 4-156 (181)
33 2ywu_A Hypoxanthine-guanine ph 99.7 1.3E-16 4.5E-21 123.1 14.2 120 40-166 12-136 (181)
34 3lrt_A Ribose-phosphate pyroph 99.7 1.5E-16 5.2E-21 130.7 14.1 117 55-186 146-263 (286)
35 3ohp_A Hypoxanthine phosphorib 99.7 3.1E-16 1.1E-20 120.5 15.0 121 39-166 6-132 (177)
36 1nul_A XPRT, xanthine-guanine 99.7 3.2E-17 1.1E-21 123.1 8.7 110 40-165 5-116 (152)
37 1ufr_A TT1027, PYR mRNA-bindin 99.7 8.3E-17 2.8E-21 123.9 10.2 121 40-165 6-137 (181)
38 1wd5_A Hypothetical protein TT 99.7 2E-16 6.9E-21 124.4 12.0 117 62-183 23-177 (208)
39 1u9y_A RPPK;, ribose-phosphate 99.7 2.5E-16 8.6E-21 129.4 9.0 122 52-186 144-266 (284)
40 2xbu_A Hypoxanthine-guanine ph 99.6 9.5E-16 3.3E-20 121.7 11.1 127 39-166 6-161 (221)
41 1w30_A PYRR bifunctional prote 99.6 9E-16 3.1E-20 120.2 10.2 122 39-165 14-153 (201)
42 3s5j_B Ribose-phosphate pyroph 99.6 1.1E-15 3.8E-20 127.4 11.0 125 49-186 150-274 (326)
43 3acd_A Hypoxanthine-guanine ph 99.6 4.3E-15 1.5E-19 114.6 13.0 118 38-165 10-135 (181)
44 2ji4_A Phosphoribosyl pyrophos 99.6 2E-15 6.8E-20 128.6 9.2 136 49-186 178-333 (379)
45 3dah_A Ribose-phosphate pyroph 99.6 4E-15 1.4E-19 123.9 9.8 112 62-186 166-277 (319)
46 1dku_A Protein (phosphoribosyl 99.6 8.8E-15 3E-19 121.9 11.3 112 62-186 167-278 (317)
47 1ecf_A Glutamine phosphoribosy 99.6 1.7E-14 5.9E-19 127.1 11.7 120 43-163 275-397 (504)
48 1ao0_A Glutamine phosphoribosy 99.4 2.5E-13 8.5E-18 118.4 9.4 115 46-162 258-375 (459)
49 1dqn_A Guanine phosphoribosylt 99.4 1E-13 3.6E-18 110.5 4.5 113 38-166 32-154 (230)
50 1i5e_A Uracil phosphoribosyltr 99.2 6.9E-11 2.3E-15 92.9 11.7 99 63-174 71-171 (209)
51 1o5o_A Uracil phosphoribosyltr 99.1 1.3E-10 4.6E-15 91.9 7.7 97 65-174 85-183 (221)
52 2e55_A Uracil phosphoribosyltr 99.1 9.2E-10 3.1E-14 86.3 9.9 96 65-174 71-168 (208)
53 2ehj_A Uracil phosphoribosyltr 99.0 9.4E-10 3.2E-14 86.3 9.7 98 64-174 71-170 (208)
54 1v9s_A Uracil phosphoribosyltr 99.0 7.6E-10 2.6E-14 86.8 6.5 98 64-174 71-170 (208)
55 1bd3_D Uprtase, uracil phospho 98.9 3.2E-09 1.1E-13 85.0 8.7 97 65-174 105-205 (243)
56 3dmp_A Uracil phosphoribosyltr 98.8 7.2E-09 2.5E-13 81.7 6.4 96 65-174 80-178 (217)
57 1xtt_A Probable uracil phospho 98.7 6.8E-08 2.3E-12 76.1 8.2 107 64-180 73-190 (216)
58 3dah_A Ribose-phosphate pyroph 80.6 17 0.0006 29.6 10.4 76 70-159 13-92 (319)
59 1u9y_A RPPK;, ribose-phosphate 76.2 19 0.00066 28.6 9.3 74 72-159 8-84 (284)
60 3s5j_B Ribose-phosphate pyroph 73.1 37 0.0013 27.7 10.7 75 71-159 10-88 (326)
61 2ji4_A Phosphoribosyl pyrophos 56.1 60 0.0021 26.9 8.7 75 71-159 36-117 (379)
62 1dku_A Protein (phosphoribosyl 52.6 90 0.0031 25.1 10.9 78 69-160 14-95 (317)
63 3lrt_A Ribose-phosphate pyroph 52.2 28 0.00097 27.8 5.8 70 74-159 10-83 (286)
64 4hwg_A UDP-N-acetylglucosamine 49.3 36 0.0012 28.1 6.2 48 44-91 76-123 (385)
65 3f6p_A Transcriptional regulat 49.2 36 0.0012 22.0 5.3 27 126-155 3-29 (120)
66 1r6j_A Syntenin 1; PDZ, membra 46.9 32 0.0011 21.9 4.4 34 122-155 41-74 (82)
67 3gl9_A Response regulator; bet 46.6 42 0.0014 21.8 5.3 27 126-155 3-29 (122)
68 3eod_A Protein HNR; response r 46.2 44 0.0015 21.7 5.4 29 124-155 6-34 (130)
69 3to5_A CHEY homolog; alpha(5)b 42.9 21 0.00071 24.9 3.3 30 124-156 11-40 (134)
70 3h5i_A Response regulator/sens 41.9 49 0.0017 22.0 5.1 28 124-154 4-31 (140)
71 3lkv_A Uncharacterized conserv 39.9 1.3E+02 0.0044 23.3 12.7 77 9-92 17-97 (302)
72 3lte_A Response regulator; str 39.3 58 0.002 21.1 5.1 28 124-154 5-32 (132)
73 1tmy_A CHEY protein, TMY; chem 38.3 75 0.0026 20.1 5.5 28 125-155 2-29 (120)
74 3gge_A PDZ domain-containing p 37.8 65 0.0022 21.2 4.9 43 121-163 46-88 (95)
75 1wi4_A Synip, syntaxin binding 35.7 58 0.002 21.4 4.5 37 122-158 60-99 (109)
76 3tum_A Shikimate dehydrogenase 35.0 66 0.0023 25.2 5.4 37 123-166 123-159 (269)
77 2j48_A Two-component sensor ki 34.4 82 0.0028 19.4 5.2 10 126-135 2-11 (119)
78 3s2u_A UDP-N-acetylglucosamine 34.4 1.1E+02 0.0036 24.7 6.8 36 56-91 86-121 (365)
79 3rsc_A CALG2; TDP, enediyne, s 33.2 97 0.0033 24.8 6.4 42 50-92 106-147 (415)
80 3hzh_A Chemotaxis response reg 33.0 82 0.0028 21.4 5.2 30 124-156 35-64 (157)
81 3gt7_A Sensor protein; structu 32.7 78 0.0027 21.4 5.0 28 124-154 6-33 (154)
82 3ia7_A CALG4; glycosysltransfe 32.4 1.1E+02 0.0039 24.1 6.7 40 51-91 91-130 (402)
83 3otg_A CALG1; calicheamicin, T 31.9 88 0.003 25.0 5.9 38 52-91 120-157 (412)
84 3grc_A Sensor protein, kinase; 31.7 1E+02 0.0034 20.2 5.4 27 125-154 6-32 (140)
85 1o63_A ATP phosphoribosyltrans 31.3 13 0.00044 28.8 0.6 20 131-157 146-165 (219)
86 2p6p_A Glycosyl transferase; X 31.3 1.1E+02 0.0037 24.3 6.3 38 52-91 97-134 (384)
87 3hdv_A Response regulator; PSI 31.3 92 0.0032 20.2 5.1 29 124-155 6-34 (136)
88 2yjn_A ERYCIII, glycosyltransf 31.2 77 0.0026 26.0 5.5 34 56-91 138-171 (441)
89 1sxj_A Activator 1 95 kDa subu 31.2 1.6E+02 0.0054 25.0 7.6 56 37-92 38-109 (516)
90 2iya_A OLEI, oleandomycin glyc 31.1 1.3E+02 0.0045 24.2 6.9 39 51-91 98-136 (424)
91 3hix_A ALR3790 protein; rhodan 30.7 58 0.002 21.1 3.8 31 123-156 50-80 (106)
92 4fzr_A SSFS6; structural genom 30.7 1.1E+02 0.0038 24.4 6.3 38 52-91 113-150 (398)
93 1ve4_A ATP phosphoribosyltrans 30.5 14 0.00046 28.3 0.6 19 132-157 152-170 (206)
94 3m6m_D Sensory/regulatory prot 30.1 75 0.0026 21.2 4.5 28 124-154 13-40 (143)
95 1o97_C Electron transferring f 29.9 81 0.0028 24.7 5.1 42 49-90 99-144 (264)
96 3t4e_A Quinate/shikimate dehyd 29.8 88 0.003 25.1 5.4 36 123-165 146-181 (312)
97 2jtq_A Phage shock protein E; 29.3 89 0.003 19.1 4.4 32 123-157 39-70 (85)
98 2iyf_A OLED, oleandomycin glyc 29.2 1.5E+02 0.0052 23.8 7.0 40 51-92 93-132 (430)
99 1z7m_E ATP phosphoribosyltrans 28.7 12 0.00042 28.6 0.1 19 132-157 154-172 (208)
100 1efv_B Electron transfer flavo 28.7 87 0.003 24.4 5.1 41 50-90 104-148 (255)
101 3i42_A Response regulator rece 28.2 84 0.0029 20.1 4.4 11 126-136 4-14 (127)
102 3foj_A Uncharacterized protein 28.1 1.2E+02 0.004 19.2 5.1 28 123-153 54-81 (100)
103 3ilm_A ALR3790 protein; rhodan 28.1 68 0.0023 22.2 4.0 31 123-156 54-84 (141)
104 2d92_A INAD-like protein; PDZ 27.9 1.3E+02 0.0043 19.5 5.6 36 122-157 63-98 (108)
105 3dzc_A UDP-N-acetylglucosamine 27.8 1E+02 0.0035 25.1 5.7 44 48-91 97-141 (396)
106 3ot5_A UDP-N-acetylglucosamine 27.5 1E+02 0.0035 25.3 5.6 45 47-91 99-144 (403)
107 3o46_A Maguk P55 subfamily mem 27.5 1.1E+02 0.0037 19.1 4.7 32 122-153 47-78 (93)
108 3mm4_A Histidine kinase homolo 27.3 70 0.0024 23.2 4.2 28 123-153 59-86 (206)
109 3h1g_A Chemotaxis protein CHEY 27.2 84 0.0029 20.3 4.3 27 125-154 5-31 (129)
110 3e17_A Tight junction protein 26.6 1.2E+02 0.0041 18.8 4.7 34 122-155 40-73 (88)
111 4ds3_A Phosphoribosylglycinami 26.5 52 0.0018 24.9 3.3 48 134-181 14-63 (209)
112 1efp_B ETF, protein (electron 26.0 85 0.0029 24.3 4.6 41 50-90 101-145 (252)
113 3kto_A Response regulator rece 25.7 93 0.0032 20.3 4.3 28 125-155 6-33 (136)
114 3eul_A Possible nitrate/nitrit 25.7 90 0.0031 20.9 4.3 27 123-152 13-39 (152)
115 3iwh_A Rhodanese-like domain p 25.6 1.2E+02 0.0039 19.8 4.6 31 123-156 54-84 (103)
116 1dcf_A ETR1 protein; beta-alph 25.3 89 0.003 20.3 4.1 29 124-155 6-34 (136)
117 2pln_A HP1043, response regula 25.2 88 0.003 20.4 4.1 30 123-155 16-45 (137)
118 1i16_A Interleukin 16, LCF; cy 25.1 92 0.0031 21.1 4.2 38 121-158 75-112 (130)
119 3p9x_A Phosphoribosylglycinami 25.1 52 0.0018 25.0 3.1 45 137-181 12-58 (211)
120 1nu0_A Hypothetical protein YQ 24.9 1.4E+02 0.0047 20.9 5.1 31 62-92 53-95 (138)
121 3snk_A Response regulator CHEY 24.6 1E+02 0.0035 20.0 4.4 29 124-155 13-42 (135)
122 3gk5_A Uncharacterized rhodane 24.4 1E+02 0.0035 20.0 4.2 28 123-153 53-80 (108)
123 1wg6_A Hypothetical protein (r 24.2 1.2E+02 0.0039 20.5 4.5 30 122-151 74-103 (127)
124 2vd3_A ATP phosphoribosyltrans 23.9 21 0.00073 28.7 0.7 19 132-157 159-177 (289)
125 3tqr_A Phosphoribosylglycinami 23.8 72 0.0025 24.2 3.7 45 136-181 14-60 (215)
126 3kyj_B CHEY6 protein, putative 23.7 87 0.003 20.7 3.8 25 124-151 12-36 (145)
127 1h3d_A ATP-phosphoribosyltrans 23.6 21 0.00072 28.9 0.6 19 132-157 168-186 (299)
128 3dfz_A SIRC, precorrin-2 dehyd 23.5 98 0.0034 23.6 4.4 30 123-156 29-58 (223)
129 1f0k_A MURG, UDP-N-acetylgluco 23.2 2.4E+02 0.0081 21.8 6.9 41 51-91 85-125 (364)
130 2a9o_A Response regulator; ess 23.2 1.4E+02 0.0049 18.5 5.1 25 127-154 3-27 (120)
131 3jte_A Response regulator rece 22.7 1.5E+02 0.0052 19.3 5.0 9 126-134 4-12 (143)
132 1nh8_A ATP phosphoribosyltrans 22.4 23 0.00079 28.7 0.6 18 132-156 173-190 (304)
133 3fbt_A Chorismate mutase and s 22.1 1.3E+02 0.0044 23.8 5.0 37 123-166 120-156 (282)
134 1wfg_A Regulating synaptic mem 21.9 1.6E+02 0.0054 19.9 4.9 37 122-158 84-121 (131)
135 1kyq_A Met8P, siroheme biosynt 21.8 1.1E+02 0.0039 24.0 4.6 31 123-157 11-41 (274)
136 3eme_A Rhodanese-like domain p 21.7 1.5E+02 0.0053 18.7 4.6 28 123-153 54-81 (103)
137 3tsa_A SPNG, NDP-rhamnosyltran 21.7 2E+02 0.0068 22.7 6.2 39 51-91 103-141 (391)
138 3r68_A Na(+)/H(+) exchange reg 21.6 1.3E+02 0.0045 18.6 4.2 34 122-155 47-80 (95)
139 1gmx_A GLPE protein; transfera 21.6 86 0.0029 20.2 3.3 30 123-155 56-85 (108)
140 4gmk_A Ribose-5-phosphate isom 21.6 84 0.0029 24.3 3.6 48 41-91 27-74 (228)
141 3t6k_A Response regulator rece 21.5 1.2E+02 0.0041 19.9 4.2 27 125-154 4-30 (136)
142 3mvn_A UDP-N-acetylmuramate:L- 21.1 1.4E+02 0.0048 21.0 4.6 25 127-151 36-60 (163)
143 3pwz_A Shikimate dehydrogenase 20.8 1.7E+02 0.0057 22.8 5.4 36 123-165 118-153 (272)
144 4dad_A Putative pilus assembly 20.7 83 0.0028 20.8 3.2 31 123-156 18-49 (146)
145 1mb3_A Cell division response 20.6 1.2E+02 0.0042 19.0 4.0 12 126-137 2-13 (124)
146 3iv7_A Alcohol dehydrogenase I 20.4 1.3E+02 0.0043 24.7 4.7 45 49-93 75-120 (364)
147 2ywr_A Phosphoribosylglycinami 20.4 95 0.0032 23.4 3.7 46 136-181 10-57 (216)
148 3kcq_A Phosphoribosylglycinami 20.4 59 0.002 24.7 2.5 47 135-181 16-64 (215)
149 1kwa_A Hcask/LIN-2 protein; PD 20.3 1.6E+02 0.0056 18.1 4.5 32 122-153 44-75 (88)
150 3a10_A Response regulator; pho 20.0 1.7E+02 0.0057 18.1 5.1 13 127-139 3-15 (116)
No 1
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=100.00 E-value=8.3e-34 Score=220.72 Aligned_cols=176 Identities=35% Similarity=0.701 Sum_probs=150.7
Q ss_pred ChhHHHHhhcccccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhc----CCCCEEEEeCCCChhhHHHHHHHhCC
Q 029645 11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGA 86 (190)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~----~~~d~Iv~i~~gG~~~a~~la~~L~~ 86 (190)
.++++.|++.+|..|+||++|+.|+|+..++.+++.++.+++.|++++.+ .++|+|+|++.||+++|..+|..+++
T Consensus 4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (187)
T 1g2q_A 4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83 (187)
T ss_dssp HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence 36789999999999999999999999999999999999999999999875 46899999999999999999999999
Q ss_pred CEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 87 KFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 87 p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
|+..+++..+.++...+..+..+++...+++..+...+|++||||||++|||+|+.++++.|++.|++++.+++++++++
T Consensus 84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 99888877655555554445545555567766555568999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCeEEEEecccc
Q 029645 167 VRGQRRLDGKPLYILVEPRLS 187 (190)
Q Consensus 167 ~~g~~~l~~~~~~sl~~~~~~ 187 (190)
..|++++ |+|++||+++++.
T Consensus 164 ~~g~~~l-~~~~~sl~~~~~~ 183 (187)
T 1g2q_A 164 LKGRSKL-NAPVFTLLNAQKE 183 (187)
T ss_dssp SSCCCCC-SSCEEECC-----
T ss_pred cCchhhc-CccEEEEEEechh
Confidence 7788888 9999999999763
No 2
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=5.7e-34 Score=222.16 Aligned_cols=182 Identities=48% Similarity=0.899 Sum_probs=154.1
Q ss_pred cCCCCCCh-hHHHHhhcccccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHH
Q 029645 5 ENGLRGDP-RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALA 83 (190)
Q Consensus 5 ~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~ 83 (190)
.-||.... .|+.|++.+|..|+||++++.|.|+..++.+++.++.+++.+++.+...++|+|+|+|.||+++|..+|..
T Consensus 5 ~~~~~~~~~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~ 84 (190)
T 2dy0_A 5 SSGMTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALG 84 (190)
T ss_dssp ----CCCHHHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHH
Confidence 34554333 48889999999999999999999999999999999999999999997667899999999999999999999
Q ss_pred hCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029645 84 IGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 163 (190)
Q Consensus 84 L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~ 163 (190)
+++|++++||..+.++...+..+..+++...+++..+...+|++||||||++|||+|+.++++.|+++|++++.++++++
T Consensus 85 l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~ 164 (190)
T 2dy0_A 85 LGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIIN 164 (190)
T ss_dssp HTCEEEEEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HCCCEEEEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEE
Confidence 99999888877665555554445445555566665444468999999999999999999999999999999999999999
Q ss_pred cCCcccccccc--CCCeEEEEeccc
Q 029645 164 LPEVRGQRRLD--GKPLYILVEPRL 186 (190)
Q Consensus 164 ~~~~~g~~~l~--~~~~~sl~~~~~ 186 (190)
+.+.+|.+++. |+|++||+++++
T Consensus 165 ~~~~~~~~~l~~~g~~v~sl~~~~~ 189 (190)
T 2dy0_A 165 LFDLGGEQRLEKQGITSYSLVPFPG 189 (190)
T ss_dssp EGGGCHHHHHHTTTCEEEEEEEECC
T ss_pred ccCcchHHHHhhCCCcEEEEEEecC
Confidence 98777888886 899999999864
No 3
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=100.00 E-value=2.4e-33 Score=216.69 Aligned_cols=175 Identities=42% Similarity=0.806 Sum_probs=151.5
Q ss_pred ChhHHHHhhcccccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCC
Q 029645 11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAK 87 (190)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p 87 (190)
.|.|+.|.+.+|..|+||++|..|.|+..++.+++..+.+++.+++.+... ++|+|+|++.||+++|..+|..+++|
T Consensus 3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p 82 (180)
T 1zn8_A 3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82 (180)
T ss_dssp CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence 467889999999999999999999999999999999999999999888643 38999999999999999999999999
Q ss_pred EEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCc
Q 029645 88 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEV 167 (190)
Q Consensus 88 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~ 167 (190)
+.++|+..+.++...+..+...++...+++..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++.
T Consensus 83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 162 (180)
T 1zn8_A 83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL 162 (180)
T ss_dssp EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence 98888766554444444444444445666654544689999999999999999999999999999999999999999877
Q ss_pred cccccccCCCeEEEEecc
Q 029645 168 RGQRRLDGKPLYILVEPR 185 (190)
Q Consensus 168 ~g~~~l~~~~~~sl~~~~ 185 (190)
+|.+++.++|++||++++
T Consensus 163 ~~~~~l~~~~~~sl~~~~ 180 (180)
T 1zn8_A 163 KGREKLAPVPFFSLLQYE 180 (180)
T ss_dssp CHHHHHTTSCEEEEEEEC
T ss_pred chhhhhcCCceEEEEecC
Confidence 788889999999999874
No 4
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=100.00 E-value=4.6e-33 Score=223.94 Aligned_cols=177 Identities=32% Similarity=0.549 Sum_probs=155.0
Q ss_pred CChhHHHHhhccccc-CCCCCCCc-eEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHhC
Q 029645 10 GDPRLQGISKAIRVV-PDFPIPGI-MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIG 85 (190)
Q Consensus 10 ~~~~~~~l~~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L~ 85 (190)
++++.++|++.+|.. |+||++|+ .|+|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.||+++|..+|..|+
T Consensus 15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~ 94 (236)
T 1qb7_A 15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE 94 (236)
T ss_dssp TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence 567889999999999 99999999 99999999999999999999999999765 789999999999999999999999
Q ss_pred CCEEEEeccCCCCCcee-eeeeeeec---ccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEE
Q 029645 86 AKFVPLRKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 161 (190)
Q Consensus 86 ~p~~~~rk~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl 161 (190)
+|++++||.++.++... +.+|..++ +...+++..+...+|++||||||++|||+|+.++++.|++.|+++++++++
T Consensus 95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 174 (236)
T 1qb7_A 95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI 174 (236)
T ss_dssp CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 99998887765554443 33444444 344566665555689999999999999999999999999999999999999
Q ss_pred eecCCcccccccc--------CCCeEEEEeccc
Q 029645 162 VGLPEVRGQRRLD--------GKPLYILVEPRL 186 (190)
Q Consensus 162 ~~~~~~~g~~~l~--------~~~~~sl~~~~~ 186 (190)
+++.+..|.+++. |+|++||+++++
T Consensus 175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~ 207 (236)
T 1qb7_A 175 LSIPFLKAAEKIHSTANSRYKDIKFISLLSDDA 207 (236)
T ss_dssp EECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGG
T ss_pred EEcccccHHHHHhhhcccccCCCcEEEEEEccc
Confidence 9998777888886 899999999986
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=100.00 E-value=3.8e-32 Score=211.23 Aligned_cols=176 Identities=31% Similarity=0.554 Sum_probs=152.0
Q ss_pred hhHHHHhhcccccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
+.++.|++.+|.+|+||.+|..|.|+..++.+++.++.+++.+++.+...++|+|+|+|.||+++|..+|..+++|+..+
T Consensus 3 ~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~ 82 (186)
T 1l1q_A 3 MSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVAL 82 (186)
T ss_dssp CCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEE
Confidence 46788999999999999999999999999999999999999999988766789999999999999999999999999888
Q ss_pred eccCCCCCceeeeeeeeecccc-eEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCe--EEEEEEEeecCCcc
Q 029645 92 RKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPEVR 168 (190)
Q Consensus 92 rk~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~--~i~v~vl~~~~~~~ 168 (190)
||..+.++.....++...++.. .+++..+...+|++||||||++|||+|+.++++.|+++|++ ++.+++++++++..
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~ 162 (186)
T 1l1q_A 83 RKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALK 162 (186)
T ss_dssp EETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGC
T ss_pred EecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCcc
Confidence 8776555444444443333332 46665444458999999999999999999999999999999 99999999998778
Q ss_pred ccccccCCCeEEEEecccc
Q 029645 169 GQRRLDGKPLYILVEPRLS 187 (190)
Q Consensus 169 g~~~l~~~~~~sl~~~~~~ 187 (190)
|++++.++++.+++.+.+-
T Consensus 163 g~~~l~~~~~~~~~~~~~~ 181 (186)
T 1l1q_A 163 GREKVGQKCTRLFSVIREH 181 (186)
T ss_dssp HHHHHTTTCCCEEEEEECC
T ss_pred HHHHHhhcCcceehhhhhh
Confidence 8999999999999998874
No 6
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.94 E-value=1.1e-26 Score=178.43 Aligned_cols=162 Identities=19% Similarity=0.196 Sum_probs=128.7
Q ss_pred HHhhcccccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccC
Q 029645 16 GISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPN 95 (190)
Q Consensus 16 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~ 95 (190)
++++.+|.+|+||.+.-.|++..+...++..++.+++.+++.+.. ++|+|+|++.||+++|..+|..+++|+..+++..
T Consensus 7 ~~~~~~~~~~~~~~~~g~~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~ 85 (175)
T 1vch_A 7 TVGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRR 85 (175)
T ss_dssp EETTEEEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSC
T ss_pred EecceeeEcCceEcCCCcEEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecC
Confidence 578899999999998546799999999999999999999998865 6899999999999999999999999998877655
Q ss_pred CC--CCceeeeeeeeecc-cceEEEecCCC--CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccc
Q 029645 96 KL--PGEVISEAYVLEYG-TDRLEMHVGAI--EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQ 170 (190)
Q Consensus 96 ~~--~~~~~~~~~~~~~~-~~~~~l~~~~~--~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~ 170 (190)
+. +.......+...++ ...+.+..+.. .+|++||||||++|||+|+.++++.|+++|++.+.++++++++..
T Consensus 86 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~--- 162 (175)
T 1vch_A 86 RPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP--- 162 (175)
T ss_dssp CTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC---
T ss_pred CCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC---
Confidence 32 12111111111111 12444432222 389999999999999999999999999999999999999998632
Q ss_pred ccccCCCeEEEEecc
Q 029645 171 RRLDGKPLYILVEPR 185 (190)
Q Consensus 171 ~~l~~~~~~sl~~~~ 185 (190)
+.|++||+.++
T Consensus 163 ----~~~~~sl~~~~ 173 (175)
T 1vch_A 163 ----GLAVDTVAELP 173 (175)
T ss_dssp ----SSCCEEEEECC
T ss_pred ----CcceEEEEeec
Confidence 78999999876
No 7
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.94 E-value=1.7e-25 Score=174.89 Aligned_cols=170 Identities=21% Similarity=0.298 Sum_probs=129.4
Q ss_pred hHHHHhhcccccCCCCCCCceEEe-cHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 13 RLQGISKAIRVVPDFPIPGIMFQD-ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
+.+.|.+.-+..++ ++++.| +.+...++..++.+++.|++.+...++|+|+|+|.||+++|..+|+.+++|+..+
T Consensus 7 l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~ 82 (197)
T 1y0b_A 7 LKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFA 82 (197)
T ss_dssp HHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEE
Confidence 44445555455444 445543 2334479999999999999999766789999999999999999999999999888
Q ss_pred eccCCCC--Cceeee-eeeeeccc-ceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCc
Q 029645 92 RKPNKLP--GEVISE-AYVLEYGT-DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEV 167 (190)
Q Consensus 92 rk~~~~~--~~~~~~-~~~~~~~~-~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~ 167 (190)
|+.++.+ +..... .+....+. ..+++..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++.
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 162 (197)
T 1y0b_A 83 RKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQ 162 (197)
T ss_dssp BSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTS
T ss_pred EecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEeccc
Confidence 7765433 232211 11111111 2455543444589999999999999999999999999999999999999999877
Q ss_pred ccccccc--CCCeEEEEeccc
Q 029645 168 RGQRRLD--GKPLYILVEPRL 186 (190)
Q Consensus 168 ~g~~~l~--~~~~~sl~~~~~ 186 (190)
+|.+++. ++|+++|+++++
T Consensus 163 ~~~~~l~~~~~~~~sl~~~~~ 183 (197)
T 1y0b_A 163 PGRDELVKLGYRVESLARIQS 183 (197)
T ss_dssp THHHHHHHTTCCEEEEEEEEE
T ss_pred chhhhHHhcCCcEEEEEEEEE
Confidence 7888886 789999999876
No 8
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.93 E-value=3.8e-26 Score=183.00 Aligned_cols=142 Identities=20% Similarity=0.318 Sum_probs=117.5
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~ 109 (190)
..|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.||+++|..+|..|++|++++||..+.++..
T Consensus 56 p~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~~-------- 127 (234)
T 3m3h_A 56 PIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKG-------- 127 (234)
T ss_dssp SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC-----------------
T ss_pred CEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCcc--------
Confidence 789999999999999999999999999765 7899999999999999999999999999998765432221
Q ss_pred cccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccccc--CCCeEEEEecccc
Q 029645 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD--GKPLYILVEPRLS 187 (190)
Q Consensus 110 ~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~--~~~~~sl~~~~~~ 187 (190)
..++ +...+|++||||||++|||+|+.++++.|++.|++++++++++++....|.+++. |+|++||+++++.
T Consensus 128 ---~~i~---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~~dl 201 (234)
T 3m3h_A 128 ---NQIE---GKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYSAL 201 (234)
T ss_dssp ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCHHHH
T ss_pred ---eEEe---cccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeHHHH
Confidence 1121 4556999999999999999999999999999999999999999997777788874 8999999998864
No 9
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.93 E-value=7e-25 Score=181.04 Aligned_cols=150 Identities=23% Similarity=0.377 Sum_probs=119.9
Q ss_pred EEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCC-CCceeeeeeeeecc-
Q 029645 34 FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-PGEVISEAYVLEYG- 111 (190)
Q Consensus 34 ~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~-~~~~~~~~~~~~~~- 111 (190)
|.++..++.+|..++.+++.+++.+.+.++|+|+|+|.||+++|..+|+.|++|++++||..+. .+......|.....
T Consensus 102 f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~rk~~~~t~~~~~~~~~~~g~~~ 181 (291)
T 1o57_A 102 YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSSN 181 (291)
T ss_dssp EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEBCC-----CCEEEEEEECSSCC
T ss_pred eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEEEeccCCCCceeeeeeeccccc
Confidence 5568889999999999999999999766789999999999999999999999999888776543 23333333321111
Q ss_pred -cceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 112 -TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 112 -~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
...+.+......+|++||||||++|||+|+.++++.|+++|++++++++++++++. ++++ ++|++||++++.
T Consensus 182 ~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~--~~~l-~~~~~SL~~~~~ 254 (291)
T 1o57_A 182 RIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV--DERL-VDEYMSLLTLST 254 (291)
T ss_dssp SEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC--TTSC-CSCCEEEEEEEC
T ss_pred ceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc--cccc-CCceEEEEEEcc
Confidence 12455655455689999999999999999999999999999999999999999753 3444 489999999876
No 10
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.93 E-value=3.3e-25 Score=171.26 Aligned_cols=161 Identities=22% Similarity=0.239 Sum_probs=123.3
Q ss_pred ChhHHHHhhcccccCCCCCC----CceEEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCC
Q 029645 11 DPRLQGISKAIRVVPDFPIP----GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA 86 (190)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~ 86 (190)
.++++-|.+..-...+|.-. +..|+|+..++.+|+.++.+++.+++.+.+.++|+|+|+|.+|+++|..+|+.++.
T Consensus 8 ~~l~~ll~~~a~~~g~f~l~SG~~s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~ 87 (180)
T 2p1z_A 8 AELAELVKELAVVHGKVTLSSGKEADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGR 87 (180)
T ss_dssp HHHHHHHHHHTC---------------CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSS
T ss_pred HHHHHHHHhCCeEeCcEEECCCCcCCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCC
Confidence 45666666665555667622 37899999999999999999999999997668899999999999999999999987
Q ss_pred CE--EEEeccCCCCCceeeeeeeeeccc-ceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029645 87 KF--VPLRKPNKLPGEVISEAYVLEYGT-DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 163 (190)
Q Consensus 87 p~--~~~rk~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~ 163 (190)
|+ .++|+..+. ++. ..++ +...+|++||||||++|||+|+.++++.|++.|++++.++++++
T Consensus 88 ~~~~~~~rk~~~~------------~g~~~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~ 152 (180)
T 2p1z_A 88 EIHAFVVRKEAKK------------HGMQRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVD 152 (180)
T ss_dssp CCEEEEECSCCC-------------CC-CCSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC
T ss_pred CCCeEEEEecccc------------ccchhhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEE
Confidence 64 555554321 111 1122 44468999999999999999999999999999999999999999
Q ss_pred cCCcccccccc--CCCeEEEEecccc
Q 029645 164 LPEVRGQRRLD--GKPLYILVEPRLS 187 (190)
Q Consensus 164 ~~~~~g~~~l~--~~~~~sl~~~~~~ 187 (190)
++. .|.+.++ |+|++||+++++.
T Consensus 153 ~~~-~g~~~l~~~g~~~~sl~~~~~l 177 (180)
T 2p1z_A 153 RAT-GAADVIAAEGLEYRYILGLEDL 177 (180)
T ss_dssp -CC-CHHHHHHTTTCCEEEEECSTTT
T ss_pred cCc-chHHHHHhcCCeEEEEEEHHHh
Confidence 975 6777773 8999999999863
No 11
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.93 E-value=1.3e-25 Score=180.81 Aligned_cols=143 Identities=22% Similarity=0.339 Sum_probs=123.6
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~ 109 (190)
..|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.+|+++|..+|..|++|++++||..+.++..
T Consensus 68 p~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~-------- 139 (243)
T 3dez_A 68 PIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG-------- 139 (243)
T ss_dssp SEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-------------
T ss_pred CEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce--------
Confidence 689999999999999999999999999765 7899999999999999999999999999998876433221
Q ss_pred cccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccccc--CCCeEEEEecccc
Q 029645 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD--GKPLYILVEPRLS 187 (190)
Q Consensus 110 ~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~--~~~~~sl~~~~~~ 187 (190)
..++ +...+|++||||||++|||+|+.+++++|+++|++++++++++++....+.++++ |+++++|+++++.
T Consensus 140 ---~~ie---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~~dl 213 (243)
T 3dez_A 140 ---NQIE---GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSEL 213 (243)
T ss_dssp ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCHHHH
T ss_pred ---eEEE---eccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeHHHH
Confidence 1122 4557999999999999999999999999999999999999999997777888884 8999999998874
Q ss_pred c
Q 029645 188 V 188 (190)
Q Consensus 188 ~ 188 (190)
.
T Consensus 214 ~ 214 (243)
T 3dez_A 214 I 214 (243)
T ss_dssp H
T ss_pred H
Confidence 3
No 12
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=1.1e-24 Score=168.10 Aligned_cols=140 Identities=23% Similarity=0.348 Sum_probs=118.4
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHh-hcC-CCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRY-RDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i-~~~-~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~ 109 (190)
..|.|+..++.+|+..+.+++.+++.+ ... ++|+|+|++.||+++|..+|+.+++|+.++|+..+.
T Consensus 26 ~~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~------------ 93 (178)
T 2yzk_A 26 SVYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKG------------ 93 (178)
T ss_dssp EEEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTT------------
T ss_pred CeEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccc------------
Confidence 579999999999999999999999988 654 689999999999999999999999999887765421
Q ss_pred cccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccccc--CCCeEEEEecccc
Q 029645 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD--GKPLYILVEPRLS 187 (190)
Q Consensus 110 ~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~--~~~~~sl~~~~~~ 187 (190)
++.... + .+. .+|++||||||++|||+|+.++++.|++.|++++.++++++++. ++.+++. |+|++||+++++.
T Consensus 94 ~g~~~~-i-~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~g~~~~sl~~~~~~ 169 (178)
T 2yzk_A 94 HGTLSQ-V-EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARMGVRLVSVATLKTI 169 (178)
T ss_dssp SCCCCC-C-BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTTTCEEEEEEEHHHH
T ss_pred cCccce-e-ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHcCCcEEEEeeHHHH
Confidence 111100 1 133 38999999999999999999999999999999999999999975 6777774 8999999999874
No 13
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.92 E-value=1.8e-24 Score=170.38 Aligned_cols=140 Identities=21% Similarity=0.397 Sum_probs=119.7
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhc--CCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~--~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~ 109 (190)
..|+|+..++.+|+.++.+++.+++.+.+ .++|+|+|+|.+|+++|..+|..+++|+++.||..+.
T Consensus 30 ~~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~------------ 97 (205)
T 2wns_A 30 PIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKD------------ 97 (205)
T ss_dssp EEEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTT------------
T ss_pred CEEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCc------------
Confidence 68899999999999999999999999875 4789999999999999999999999999887665431
Q ss_pred cccc-eEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccccc--CCCeEEEEeccc
Q 029645 110 YGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD--GKPLYILVEPRL 186 (190)
Q Consensus 110 ~~~~-~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~--~~~~~sl~~~~~ 186 (190)
++.. .+ ++.+.+|++||||||++|||+|+.++++.|++.|++++++++++++. ..|.++++ |+|++||+++++
T Consensus 98 ~g~~~~~---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~g~~v~sl~~~~~ 173 (205)
T 2wns_A 98 YGTKRLV---EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAHGIRLHSVCTLSK 173 (205)
T ss_dssp SSSCCSE---ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTTTCEEEEEEEHHH
T ss_pred cCccccc---cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHcCCeEEEEEEHHH
Confidence 1111 22 24556899999999999999999999999999999999999999995 46677774 899999999876
Q ss_pred c
Q 029645 187 S 187 (190)
Q Consensus 187 ~ 187 (190)
.
T Consensus 174 ~ 174 (205)
T 2wns_A 174 M 174 (205)
T ss_dssp H
T ss_pred H
Confidence 3
No 14
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.91 E-value=2.8e-24 Score=170.22 Aligned_cols=139 Identities=18% Similarity=0.306 Sum_probs=117.1
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHh------CCCEEEEeccCCCCCceee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVIS 103 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L------~~p~~~~rk~~~~~~~~~~ 103 (190)
..|.| ..++.+|..++.+++.+++.+.+. ++|+|+|++.+|+++|..+|+.| ++|++++||..+.++.
T Consensus 32 ~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~--- 107 (213)
T 1lh0_A 32 PYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE--- 107 (213)
T ss_dssp EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT---
T ss_pred cEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCC---
Confidence 68899 568899999999999999998753 68999999999999999999999 8999888875542211
Q ss_pred eeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccc---------c
Q 029645 104 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRL---------D 174 (190)
Q Consensus 104 ~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l---------~ 174 (190)
...++ +...+| +||||||++|||+|+.++++.|++.|++++++++++++.+ .|++++ .
T Consensus 108 --------~~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~ 174 (213)
T 1lh0_A 108 --------GGSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDY 174 (213)
T ss_dssp --------CSSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHH
T ss_pred --------CCcee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHc
Confidence 01122 334589 9999999999999999999999999999999999999987 677766 4
Q ss_pred CCCeEEEEecccc
Q 029645 175 GKPLYILVEPRLS 187 (190)
Q Consensus 175 ~~~~~sl~~~~~~ 187 (190)
|+|++||+++++.
T Consensus 175 g~~v~sl~~~~~l 187 (213)
T 1lh0_A 175 GCKVISIITLKDL 187 (213)
T ss_dssp CCEEEEEEEHHHH
T ss_pred CCCeEEEEEHHHH
Confidence 8999999999863
No 15
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.91 E-value=4.3e-24 Score=170.81 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=115.3
Q ss_pred CceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHh------CCCEEEEeccCCCCCcee
Q 029645 31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVI 102 (190)
Q Consensus 31 ~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L------~~p~~~~rk~~~~~~~~~ 102 (190)
+..|+|.. ++.+|..++.+++.+++.+.+. ++|+|+|++.+|+++|..+|..| ++|++++||..+..+.
T Consensus 49 Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g~-- 125 (232)
T 3mjd_A 49 SPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGE-- 125 (232)
T ss_dssp EEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC--------
T ss_pred cceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCCC--
Confidence 37899985 5789999999999999999754 68999999999999999999997 8999998886543211
Q ss_pred eeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccc--------ccc-
Q 029645 103 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQ--------RRL- 173 (190)
Q Consensus 103 ~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~--------~~l- 173 (190)
...++ +...+|++||||||++|||+|+.+++++|++.|++++++++++++.+ .|+ +.+
T Consensus 126 ---------~~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~~~~a~~~~~~ 192 (232)
T 3mjd_A 126 ---------GGVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDSDISATKKISQ 192 (232)
T ss_dssp ----------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTSSSCHHHHHHH
T ss_pred ---------CceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccccchhHHHHHH
Confidence 01122 33458999999999999999999999999999999999999999974 454 333
Q ss_pred -cCCCeEEEEecccc
Q 029645 174 -DGKPLYILVEPRLS 187 (190)
Q Consensus 174 -~~~~~~sl~~~~~~ 187 (190)
.|+|++||+++++.
T Consensus 193 ~~gv~v~sL~~~~~l 207 (232)
T 3mjd_A 193 DFNIPVLAVTNFESI 207 (232)
T ss_dssp HHCCCEEEEEEHHHH
T ss_pred HcCCcEEEEEeHHHH
Confidence 39999999999764
No 16
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.91 E-value=8e-24 Score=184.02 Aligned_cols=167 Identities=20% Similarity=0.289 Sum_probs=136.5
Q ss_pred CCCCCChhHHHHhhcc-cccCCCC-CCC---ceEEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHH
Q 029645 6 NGLRGDPRLQGISKAI-RVVPDFP-IPG---IMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSI 80 (190)
Q Consensus 6 ~~~~~~~~~~~l~~~~-~~~~~~~-~~~---~~~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~l 80 (190)
+-|...++++.|.+.- ...++|+ ..| ..|+|+..++.+|+.++.+++.+++.+.+.++|+|+|++.||+++|..+
T Consensus 255 ~~~~~~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~l 334 (453)
T 3qw4_B 255 AKGASVELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAI 334 (453)
T ss_dssp CCSCCHHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHH
T ss_pred cccHHHHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHH
Confidence 3456666777777665 4457888 444 5799999999999999999999999998778999999999999999999
Q ss_pred HHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEE
Q 029645 81 ALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160 (190)
Q Consensus 81 a~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~v 160 (190)
|..|++|++++||..+. ++.... + .+.+.+|++||||||++|||+|+.++++.|++.|++++++++
T Consensus 335 A~~L~~p~~~~rk~~k~------------~g~~~~-i-~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~ 400 (453)
T 3qw4_B 335 SNEMNVPLIYPRREAKI------------YGTKAA-I-EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVV 400 (453)
T ss_dssp HHHHCCCEEEESSCC-------------------C-E-ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHhCCCEEEEEeeccc------------cCcCce-E-ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEE
Confidence 99999999998876532 121111 1 245569999999999999999999999999999999999999
Q ss_pred EeecCCcccccccc--CCCeEEEEecccc
Q 029645 161 VVGLPEVRGQRRLD--GKPLYILVEPRLS 187 (190)
Q Consensus 161 l~~~~~~~g~~~l~--~~~~~sl~~~~~~ 187 (190)
++++.. .|+++++ |+|++||+++++.
T Consensus 401 lvdr~~-~g~~~l~~~g~~v~sL~~~~dl 428 (453)
T 3qw4_B 401 LVDRDM-GAKAFLNKLGYDFEAVVGLHQL 428 (453)
T ss_dssp EEECSS-SHHHHHHHTTCCEEEEEEHHHH
T ss_pred EEECCc-chHHHHHhcCCCEEEEeEHHHH
Confidence 999964 6777774 8999999999874
No 17
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.90 E-value=2.4e-23 Score=166.83 Aligned_cols=140 Identities=19% Similarity=0.295 Sum_probs=113.8
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHh------CCCEEEEeccCCCCCceee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVIS 103 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L------~~p~~~~rk~~~~~~~~~~ 103 (190)
..|+|. .++.+|..++.+++.+++.+.+. ++|+|+|++.+|+++|..+|..| ++|++++||..+.++..
T Consensus 57 p~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~~-- 133 (238)
T 3n2l_A 57 PYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGEG-- 133 (238)
T ss_dssp EEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC---------
T ss_pred cEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCCC--
Confidence 689997 46799999999999999999753 78999999999999999999997 78999998876432210
Q ss_pred eeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccc------c---c
Q 029645 104 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRR------L---D 174 (190)
Q Consensus 104 ~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~------l---~ 174 (190)
..++ +...+| +||||||++|||+|+.+++++|++.|++++++++++++.+ .|.+. + .
T Consensus 134 ---------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e-gG~~~l~a~~~~~~~~ 199 (238)
T 3n2l_A 134 ---------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE-KGKGELSAIQEVERDF 199 (238)
T ss_dssp ----------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC-BCSSSSBHHHHHHHHH
T ss_pred ---------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc-CccchhhHHHHHHHHc
Confidence 1222 344589 9999999999999999999999999999999999999974 44432 2 3
Q ss_pred CCCeEEEEeccccc
Q 029645 175 GKPLYILVEPRLSV 188 (190)
Q Consensus 175 ~~~~~sl~~~~~~~ 188 (190)
|+|++||+++++..
T Consensus 200 Gv~v~SL~~~~~l~ 213 (238)
T 3n2l_A 200 GCAVISIVSLTDLI 213 (238)
T ss_dssp CCEEEEEEEHHHHH
T ss_pred CCCEEEEEEHHHHH
Confidence 89999999998643
No 18
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.90 E-value=4e-23 Score=163.18 Aligned_cols=140 Identities=24% Similarity=0.360 Sum_probs=118.7
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeee
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~ 109 (190)
..|+|...++.+|..++.+++.+++.+.+. ++|+|+|++.||+++|..+|+.+++|+.++||.++..+.
T Consensus 36 ~~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~--------- 106 (211)
T 2aee_A 36 PIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGA--------- 106 (211)
T ss_dssp SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC-------------
T ss_pred CeEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCC---------
Confidence 478999999999999999999999988643 679999999999999999999999999888776542211
Q ss_pred cccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccccc--CCCeEEEEecc
Q 029645 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD--GKPLYILVEPR 185 (190)
Q Consensus 110 ~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~--~~~~~sl~~~~ 185 (190)
...+. +...+|++||||||++|||+|+.++++.|++.|+++++++++++++...+.+++. ++|++++++..
T Consensus 107 --~~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~ 179 (211)
T 2aee_A 107 --GNQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYT 179 (211)
T ss_dssp --CCSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHH
T ss_pred --cceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeHH
Confidence 01222 4446899999999999999999999999999999999999999998767878875 79999998874
No 19
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.90 E-value=3e-23 Score=165.59 Aligned_cols=140 Identities=18% Similarity=0.260 Sum_probs=115.9
Q ss_pred ceEEecHhHhcCHHHHHHHHHHHHHHhhcC--CCCEEEEeCCCChhhHHHHHHHh---------CCCEEEEeccCCCCCc
Q 029645 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI---------GAKFVPLRKPNKLPGE 100 (190)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~a~~la~~L---------~~p~~~~rk~~~~~~~ 100 (190)
..|+|. .++.+|+.++.+++.+++.+.+. ++|+|++++.+|+++|..+|+.| ++|+.++|+.++.
T Consensus 36 ~~y~d~-~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~--- 111 (226)
T 2ps1_A 36 PYFFNL-GLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKD--- 111 (226)
T ss_dssp EEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEES---
T ss_pred CEEEec-CccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhh---
Confidence 678894 68899999999999999998753 68999999999999999999999 9999888765432
Q ss_pred eeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccc----c----
Q 029645 101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQR----R---- 172 (190)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~----~---- 172 (190)
++...+.. +...+|++||||||++|||+|+.++++.|++.|++++++++++++.+. |.+ +
T Consensus 112 ---------~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~ 179 (226)
T 2ps1_A 112 ---------HGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSAT 179 (226)
T ss_dssp ---------STTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHH
T ss_pred ---------cCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHH
Confidence 22222322 233589999999999999999999999999999999999999999763 443 1
Q ss_pred -----ccCCCeEEEEecccc
Q 029645 173 -----LDGKPLYILVEPRLS 187 (190)
Q Consensus 173 -----l~~~~~~sl~~~~~~ 187 (190)
..|+|++||+++++.
T Consensus 180 ~~~~~~~g~~v~sl~~~~~l 199 (226)
T 2ps1_A 180 QTVSKKYGIPVLSIVSLIHI 199 (226)
T ss_dssp HHHHHHHTCCEEEEEEHHHH
T ss_pred HHHHHhcCCeEEEEecHHHH
Confidence 348999999999863
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.84 E-value=3.1e-20 Score=145.88 Aligned_cols=134 Identities=16% Similarity=0.198 Sum_probs=105.4
Q ss_pred cCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCE--EEEeccCCCC
Q 029645 24 VPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLP 98 (190)
Q Consensus 24 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~--~~~rk~~~~~ 98 (190)
-|+||+++.+..|+..++.+++.++..++.|++++.+. ++++|+|+++||+.+|..+|+.|++|+ .++++.+...
T Consensus 17 ~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~~ 96 (204)
T 3hvu_A 17 NLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGH 96 (204)
T ss_dssp --CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSG
T ss_pred CCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEecC
Confidence 38999999988899999999999999999999888642 578999999999999999999999984 3444322100
Q ss_pred CceeeeeeeeecccceEEEecC--CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 99 GEVISEAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~--~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
. ++....+++..+ ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 97 ~---------~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 97 S---------TVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp G---------GTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred C---------CccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 0 011122333222 2358999999999999999999999999999999999999999863
No 21
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.81 E-value=7.6e-20 Score=146.53 Aligned_cols=145 Identities=19% Similarity=0.141 Sum_probs=105.8
Q ss_pred cccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhc---CCCCEEEEeCCCChhhHHHHHHHhCCCEEEEec-cCCC
Q 029645 22 RVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGAKFVPLRK-PNKL 97 (190)
Q Consensus 22 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk-~~~~ 97 (190)
....+||.|+.++.|+..++.+++.++..++.|++++.+ .++++|+|+++||+++|..+|+.|+.++..++. ..+.
T Consensus 30 ~~~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~ 109 (233)
T 1fsg_A 30 YNADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVP 109 (233)
T ss_dssp EEGGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSC
T ss_pred CccccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCC
Confidence 445789999988889999999999999999999988864 268999999999999999999999873211110 0000
Q ss_pred CC--ceee-eeeeeecccceEEEecC--CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 98 PG--EVIS-EAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 98 ~~--~~~~-~~~~~~~~~~~~~l~~~--~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
+. .+.. .+|..++....+.+... ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 110 P~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 110 PFFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CcEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 10 0000 01211111122333222 2258999999999999999999999999999999999999999874
No 22
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.80 E-value=4.7e-19 Score=132.76 Aligned_cols=120 Identities=15% Similarity=0.246 Sum_probs=91.5
Q ss_pred HhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEE-EEeccCCCCCceeeeeeeeecccceEEEe
Q 029645 40 LLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV-PLRKPNKLPGEVISEAYVLEYGTDRLEMH 118 (190)
Q Consensus 40 ~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~-~~rk~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (190)
++.+++.++.+++.|++++...++|+|+|+++||+++|..+|..|++|+. .+++....... .......+...
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 76 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGID-------ERGEKPVITIP 76 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC---------CCCSSCEEEEC
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCc-------ccccceeEecc
Confidence 35677888888999998886557899999999999999999999999965 34332111000 00011123332
Q ss_pred cCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 119 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 119 ~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
.....+|++||||||++|||+|+.++++.|++.|++.+.+++++.++.
T Consensus 77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 233468999999999999999999999999999999999999999874
No 23
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.80 E-value=5.2e-19 Score=136.55 Aligned_cols=126 Identities=13% Similarity=0.222 Sum_probs=94.7
Q ss_pred eEEecHhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCEEE--EeccCCCCCceeeeeee
Q 029645 33 MFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYV 107 (190)
Q Consensus 33 ~~~d~~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~~~--~rk~~~~~~~~~~~~~~ 107 (190)
++.|+..++.+++.++..+..|++++.+. ++++|+|+++||+.+|..+|+.|++|+.. ++... .... .
T Consensus 6 ~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~-y~~~-----~- 78 (183)
T 1hgx_A 6 MMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS-YSGT-----K- 78 (183)
T ss_dssp -CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC------------
T ss_pred cCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe-cCCc-----c-
Confidence 45677888899999999999999888642 68999999999999999999999999643 22111 0000 0
Q ss_pred eecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 108 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 108 ~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
..+...+........+|++||||||++|||+|+.++++.|++.|++.+.++++++++.
T Consensus 79 -~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 79 -STGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp -----CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred -cccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0111112111122368999999999999999999999999999999999999999863
No 24
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.79 E-value=3.5e-19 Score=141.21 Aligned_cols=134 Identities=16% Similarity=0.240 Sum_probs=102.9
Q ss_pred ccCCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhc---CCCCEEEEeCCCChhhHHHHHHHhC---------CCE--
Q 029645 23 VVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF-- 88 (190)
Q Consensus 23 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~a~~la~~L~---------~p~-- 88 (190)
..++||.|+.++.|+..++.+++.++..++.|++++.+ .+.++|+|+++||+++|..+|+.|+ +|+
T Consensus 17 ~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~ 96 (217)
T 1z7g_A 17 DLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTV 96 (217)
T ss_dssp CGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEE
T ss_pred cccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeee
Confidence 34689999988889999999999999999999988863 3678999999999999999999998 564
Q ss_pred EEEeccCCCCCceeeeeeeeecccceEEEec--C-CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecC
Q 029645 89 VPLRKPNKLPGEVISEAYVLEYGTDRLEMHV--G-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (190)
Q Consensus 89 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~ 165 (190)
..++... |..+.....+.+.. . ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus 97 ~~i~~~~----------y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~ 166 (217)
T 1z7g_A 97 DFIRLKS----------YCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR 166 (217)
T ss_dssp EEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred eeEEEEE----------ecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECc
Confidence 2333211 10000111111111 1 225899999999999999999999999999999999999999986
Q ss_pred C
Q 029645 166 E 166 (190)
Q Consensus 166 ~ 166 (190)
+
T Consensus 167 ~ 167 (217)
T 1z7g_A 167 T 167 (217)
T ss_dssp C
T ss_pred c
Confidence 4
No 25
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=138.66 Aligned_cols=132 Identities=16% Similarity=0.285 Sum_probs=100.6
Q ss_pred CCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhc---CCCCEEEEeCCCChhhHHHHHHHhC---------CCE--EE
Q 029645 25 PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF--VP 90 (190)
Q Consensus 25 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~a~~la~~L~---------~p~--~~ 90 (190)
..||.++..+.|+..++.+++.+...++.|++++.+ .++++|+|+++||+.+|..+|+.|+ +|+ ..
T Consensus 27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~ 106 (225)
T 2jbh_A 27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF 106 (225)
T ss_dssp GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence 467788877778888999999999999999988864 2678999999999999999999998 664 23
Q ss_pred EeccCCCCCceeeeeeeeecccceEEEec--C-CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 91 LRKPNKLPGEVISEAYVLEYGTDRLEMHV--G-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 91 ~rk~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
++... |..+.....+.+.. . ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 107 i~~~~----------y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 107 IRLKS----------YRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EEEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEe----------ccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 33221 10000111122221 1 2358999999999999999999999999999999999999999864
No 26
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.78 E-value=4.1e-19 Score=143.17 Aligned_cols=141 Identities=16% Similarity=0.186 Sum_probs=103.9
Q ss_pred CCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCEEE-EeccCCCCCce
Q 029645 26 DFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV 101 (190)
Q Consensus 26 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~~~-~rk~~~~~~~~ 101 (190)
.|..|..++.|+..++.+++.++..++.|+.++.+. +.++|+|+++||+.+|..+++.|+.+.++ +||..+.+...
T Consensus 48 ~f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v 127 (250)
T 3ozf_A 48 SFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGE 127 (250)
T ss_dssp GSCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred cccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceE
Confidence 355666677788889999999999999999887532 57899999999999999999999832221 12222222111
Q ss_pred ---eeeeeeeecccceEEEecCC--CCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 102 ---ISEAYVLEYGTDRLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 102 ---~~~~~~~~~~~~~~~l~~~~--~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
...+|..+++...+++..+. ..+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 128 ~fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 128 HYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 11223222333345554332 248999999999999999999999999999999999999999974
No 27
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.77 E-value=5.5e-18 Score=131.08 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=90.9
Q ss_pred cHhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCE--EEEeccCCCCCceeeeeeeeecc
Q 029645 37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYG 111 (190)
Q Consensus 37 ~~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~--~~~rk~~~~~~~~~~~~~~~~~~ 111 (190)
+..++.+++.+...+..|++++.+. ++++|+|+++||+++|..+|+.|++|+ ..+++.+..... ..
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~---------~~ 82 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSST---------KS 82 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTH---------HH
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCC---------cc
Confidence 3456778888888888888887632 578999999999999999999999986 334321110000 00
Q ss_pred cceEEEec--CCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 112 TDRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 112 ~~~~~l~~--~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
.....+.. ....+|++||||||++|||+|+.++++.|++.|++.+.++++++++.
T Consensus 83 ~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 83 SGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp HCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 01122211 22358999999999999999999999999999999999999999873
No 28
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.76 E-value=5.2e-18 Score=133.93 Aligned_cols=124 Identities=12% Similarity=0.171 Sum_probs=91.3
Q ss_pred EEecHhHhcCHHHHHHHHHHHHHHhhc---------CCCCEEEEeCCCChhhHHHHHHHh---CCCE--EEEeccCCCCC
Q 029645 34 FQDITTLLLDHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNKLPG 99 (190)
Q Consensus 34 ~~d~~~~~~~~~~~~~~~~~la~~i~~---------~~~d~Iv~i~~gG~~~a~~la~~L---~~p~--~~~rk~~~~~~ 99 (190)
+.|+..++.+++.+...++.|++++.+ .++++|+|+++||+++|..+|+.| ++|+ ..+++.+....
T Consensus 20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~ 99 (211)
T 1pzm_A 20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG 99 (211)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCc
Confidence 446777788998888888888877653 357899999999999999999999 9994 34442211000
Q ss_pred ceeeeeeeeecccceEEEec--CCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 100 EVISEAYVLEYGTDRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
. .. ...+.+.. ....+|++||||||++|||+|+.+++++|++.|++.+.++++++++.
T Consensus 100 -~-------~~-~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 100 -V-------ET-SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp -----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred -c-------cc-CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0 00 01111111 12358999999999999999999999999999999999999999874
No 29
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.75 E-value=1.9e-17 Score=128.35 Aligned_cols=123 Identities=15% Similarity=0.193 Sum_probs=94.1
Q ss_pred EecHhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCEE--EEeccCCCCCceeeeeeeee
Q 029645 35 QDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 35 ~d~~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~~--~~rk~~~~~~~~~~~~~~~~ 109 (190)
-|+..++.+++.++..++.|++++.+. ++++|+|+++||+.+|..+|+.|++|+. +++..+...+ .
T Consensus 6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~---------~ 76 (186)
T 3o7m_A 6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQ---------T 76 (186)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC------------
T ss_pred ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCC---------C
Confidence 367778889999999999998887642 5789999999999999999999999863 3432211000 0
Q ss_pred cccceEEEecC--CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 110 YGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 110 ~~~~~~~l~~~--~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
.....+++..+ ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 77 ~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 77 ETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp ----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 01112333222 2358999999999999999999999999999999999999999873
No 30
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.75 E-value=2.5e-17 Score=130.83 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=89.8
Q ss_pred ecHhHhcCHHHHHHHHHHHHHHhhcC---CC-------CEEEEeCCCChhhHHHHHHHh---CCCE--EEEeccCCCCCc
Q 029645 36 DITTLLLDHKAFKDTVDIFVDRYRDM---GI-------SVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNKLPGE 100 (190)
Q Consensus 36 d~~~~~~~~~~~~~~~~~la~~i~~~---~~-------d~Iv~i~~gG~~~a~~la~~L---~~p~--~~~rk~~~~~~~ 100 (190)
|+..++.+++.++..++.|+.++.+. +. ++|+|+++||+++|..+|+.| ++|+ ..++..+.....
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~ 85 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL 85 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence 35566778888888888888777531 23 899999999999999999999 9995 334322110000
Q ss_pred eeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
+ ..+.-.+........+|++||||||++|||+|+.++++.|++.|++.+.++++++++.
T Consensus 86 ---~----~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 86 ---T----SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred ---c----cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0 0011111111122358999999999999999999999999999999999999999874
No 31
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.74 E-value=1.4e-17 Score=130.77 Aligned_cols=120 Identities=15% Similarity=0.174 Sum_probs=89.9
Q ss_pred HhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCE--EEEeccCCCCCceeeeeeeeeccc
Q 029645 38 TTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGT 112 (190)
Q Consensus 38 ~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~--~~~rk~~~~~~~~~~~~~~~~~~~ 112 (190)
..++.+++.+...+..|++++.+. ++|+|+|+++||+++|..+|+.|++|+ ..+++.+... .. ...
T Consensus 33 ~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~-~~--------~~~ 103 (205)
T 1yfz_A 33 EEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGS-ST--------KSS 103 (205)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSH-HH--------HHH
T ss_pred ceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccC-Cc--------ccc
Confidence 345678888888888888877632 579999999999999999999999986 2333221100 00 001
Q ss_pred ceEEEec--CCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 113 DRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 113 ~~~~l~~--~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
....+.. ....+|++||||||++|||+|+.++++.|++.|++.+.++++++++.
T Consensus 104 ~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 104 GIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp CCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 1122211 22358999999999999999999999999999999999999999863
No 32
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.73 E-value=1.5e-17 Score=127.93 Aligned_cols=141 Identities=16% Similarity=0.198 Sum_probs=92.3
Q ss_pred HhHhcCHHHHHHHHHHHHHHhhcC----CCCEEEEeCCCChhhHHHHHHHhC----CC--EEEEeccCCCCCceeeeeee
Q 029645 38 TTLLLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AK--FVPLRKPNKLPGEVISEAYV 107 (190)
Q Consensus 38 ~~~~~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~a~~la~~L~----~p--~~~~rk~~~~~~~~~~~~~~ 107 (190)
..++.+++.+...+..|++++.+. ++|+|+|+++||+++|..+|+.|+ +| +..+++......... ..
T Consensus 4 ~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~---~~ 80 (181)
T 1a3c_A 4 KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSK---KT 80 (181)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC----------
T ss_pred ccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccc---cC
Confidence 345678888888888888877542 579999999999999999999997 44 334433221110000 00
Q ss_pred eecccceEE-EecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcC-CeEEEEEEEeecCCccccccccCCCeEEEEecc
Q 029645 108 LEYGTDRLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPEVRGQRRLDGKPLYILVEPR 185 (190)
Q Consensus 108 ~~~~~~~~~-l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G-a~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~ 185 (190)
... ..... .......+|++||||||++|||+|+.++++.|++.| ++.+.++++++++. + ...-.|-|..++++
T Consensus 81 ~~~-~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~~---~-~~~~~~dy~g~~ip 155 (181)
T 1a3c_A 81 SND-EPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGH---R-ELPIRADYIGKNIP 155 (181)
T ss_dssp -CC-CCEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC---C-SSSCCCSEEEEECC
T ss_pred ccc-eeeecccccCcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccCC---C-cCCCCccEEEEECC
Confidence 000 01111 111223589999999999999999999999999997 99999999999861 1 12112445555665
Q ss_pred c
Q 029645 186 L 186 (190)
Q Consensus 186 ~ 186 (190)
+
T Consensus 156 ~ 156 (181)
T 1a3c_A 156 T 156 (181)
T ss_dssp C
T ss_pred C
Confidence 4
No 33
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.72 E-value=1.3e-16 Score=123.06 Aligned_cols=120 Identities=19% Similarity=0.184 Sum_probs=87.5
Q ss_pred HhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCEE--EEeccCCCCCceeeeeeeeecccce
Q 029645 40 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR 114 (190)
Q Consensus 40 ~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~~--~~rk~~~~~~~~~~~~~~~~~~~~~ 114 (190)
++.+++.++..++.|++++.+. ++++|+|+.+||+.+|..+|+.|++|+. +++......... ..+.-.
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~~~~~-------~~~~v~ 84 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFK-------SSGEVE 84 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEecCCcc-------ccCcEE
Confidence 4668888888888888877542 5789999999999999999999999853 343221100000 001111
Q ss_pred EEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 115 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 115 ~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
+........+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 85 i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 2111122358999999999999999999999999999999999999999863
No 34
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.71 E-value=1.5e-16 Score=130.66 Aligned_cols=117 Identities=22% Similarity=0.323 Sum_probs=94.1
Q ss_pred HHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEec-CCCCCCCEEEEEcC
Q 029645 55 VDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAIEPGERALVIDD 133 (190)
Q Consensus 55 a~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~gk~VLlVDD 133 (190)
++++.+.+.++|++++.||+.+|..+|+.|++|+.+++|.++.++ .+++.. ....+|++|+||||
T Consensus 146 a~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vliVDD 211 (286)
T 3lrt_A 146 VRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLIVDD 211 (286)
T ss_dssp HHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEEEec
Confidence 333433467899999999999999999999999998887653221 122221 22358999999999
Q ss_pred ccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 134 LVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 134 vvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
+++||+|+.++++.|++.|++.+.++++|...+..+.+++ +.++..++.-++
T Consensus 212 ii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~vv~Tnt 263 (286)
T 3lrt_A 212 IISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEIHVTDT 263 (286)
T ss_dssp EESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEEEEESS
T ss_pred cccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEEEEecC
Confidence 9999999999999999999999999999999777788888 777888776655
No 35
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.71 E-value=3.1e-16 Score=120.53 Aligned_cols=121 Identities=14% Similarity=0.209 Sum_probs=87.6
Q ss_pred hHhcCHHHHHHHHHHHHHHhhcC---CC-CEEEEeCCCChhhHHHHHHHhCCCE--EEEeccCCCCCceeeeeeeeeccc
Q 029645 39 TLLLDHKAFKDTVDIFVDRYRDM---GI-SVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGT 112 (190)
Q Consensus 39 ~~~~~~~~~~~~~~~la~~i~~~---~~-d~Iv~i~~gG~~~a~~la~~L~~p~--~~~rk~~~~~~~~~~~~~~~~~~~ 112 (190)
.++.+++.++..++.|++++.+. .. ++|+|+++||+.+|..+++.|+.|+ .+++........ . ..+.
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~-~------~~~~ 78 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSM-Q------SSRD 78 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CC
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCC-c------cCCc
Confidence 34567888888888888877532 24 8999999999999999999999985 334432210000 0 0011
Q ss_pred ceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 113 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 113 ~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
-.+........+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 79 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~ 132 (177)
T 3ohp_A 79 VRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPT 132 (177)
T ss_dssp CCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCc
Confidence 112211122358999999999999999999999999999999999999999873
No 36
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.70 E-value=3.2e-17 Score=123.08 Aligned_cols=110 Identities=20% Similarity=0.252 Sum_probs=84.4
Q ss_pred HhcCHHHHHHHHHHHHHHhhc-CCCCEEEEeCCCChhhHHHHHHHhCCC-EEEEeccCCCCCceeeeeeeeecccceEEE
Q 029645 40 LLLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-FVPLRKPNKLPGEVISEAYVLEYGTDRLEM 117 (190)
Q Consensus 40 ~~~~~~~~~~~~~~la~~i~~-~~~d~Iv~i~~gG~~~a~~la~~L~~p-~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l 117 (190)
++.+++.++..+..|++++.+ .++|+|+|+++||+.+|..+|+.|++| +.+++.... .. ++.....+
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y-~~----------~~~~~~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY-DH----------DNQRELKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe-cC----------cccceEEE
Confidence 456888899999999999875 357899999999999999999999999 655542221 00 01111222
Q ss_pred ecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecC
Q 029645 118 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (190)
Q Consensus 118 ~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~ 165 (190)
..+...+|++||||||+++||+|+.++++.|++ +.+++|++++
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~ 116 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP 116 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECC
Confidence 223335899999999999999999999999986 6789999996
No 37
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=8.3e-17 Score=123.89 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=84.0
Q ss_pred HhcCHHHHHHHHHHHHHHhhc----CCCCEEEEeCCCChhhHHHHHHHhC----CCEE--EEeccCCCCCceeeeeeeee
Q 029645 40 LLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVLE 109 (190)
Q Consensus 40 ~~~~~~~~~~~~~~la~~i~~----~~~d~Iv~i~~gG~~~a~~la~~L~----~p~~--~~rk~~~~~~~~~~~~~~~~ 109 (190)
++.+++.+...+..++.++.+ .+.++|+|+++||+++|..+|+.|+ +|+. .+++..... ... .....
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~-~~~--~~~~~ 82 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRD-DLT--EIGYR 82 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecC-ccc--ccccc
Confidence 456777777777777777643 2457999999999999999999987 7753 343321100 000 00000
Q ss_pred cccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcC-CeEEEEEEEeecC
Q 029645 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 165 (190)
Q Consensus 110 ~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G-a~~i~v~vl~~~~ 165 (190)
.....+.+ ....+|++||||||++|||+|+.++++.|++.| ++.+.++++++++
T Consensus 83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 00001222 223589999999999999999999999999999 8999999999986
No 38
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=2e-16 Score=124.36 Aligned_cols=117 Identities=26% Similarity=0.330 Sum_probs=79.3
Q ss_pred CCCEEEEeCCCChhhHHHHHHHhCCCEEE--EeccCCCCCc-eeeeeeeeecccceEEE---------------------
Q 029645 62 GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGE-VISEAYVLEYGTDRLEM--------------------- 117 (190)
Q Consensus 62 ~~d~Iv~i~~gG~~~a~~la~~L~~p~~~--~rk~~~~~~~-~~~~~~~~~~~~~~~~l--------------------- 117 (190)
+.++|+|+|+||+++|..+|+.|++|+.. ++|.+....+ ......+ ..+ ...+
T Consensus 23 ~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s-~~g--~~~~~~~~~~~~~~~~l~~~~~~~~ 99 (208)
T 1wd5_A 23 EAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVG-EGG--ELVLMPYALRYADQSYLEREAARQR 99 (208)
T ss_dssp CSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEE-TTC--CEEECTTHHHHSCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceec-CCC--cEEechhhhcccCHHHHHHHHHHHH
Confidence 57899999999999999999999999866 4543321100 0000000 000 0000
Q ss_pred -------------ecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccccCC-CeEEEEe
Q 029645 118 -------------HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGK-PLYILVE 183 (190)
Q Consensus 118 -------------~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~-~~~sl~~ 183 (190)
......+|++||||||++|||+|+.++++.|++.|++.+.+++++.++ .+.+++... .+..+.+
T Consensus 100 ~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~--~~~~~l~~~~~~v~~~~ 177 (208)
T 1wd5_A 100 DVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVERLKARAEVVALSV 177 (208)
T ss_dssp HHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHHHHHTTSEEEEEEC
T ss_pred HHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH--HHHHHhcccCcEEEEec
Confidence 001235899999999999999999999999999999999999988875 444544322 4555444
No 39
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.65 E-value=2.5e-16 Score=129.44 Aligned_cols=122 Identities=20% Similarity=0.294 Sum_probs=91.3
Q ss_pred HHHHHHhhc-CCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEE
Q 029645 52 DIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALV 130 (190)
Q Consensus 52 ~~la~~i~~-~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLl 130 (190)
..+++.+.+ .+.++|++++.||+.+|..+|+.++.|+.+++|.+.... ...+.+. +...+|++|||
T Consensus 144 ~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~VlI 210 (284)
T 1u9y_A 144 PKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVFI 210 (284)
T ss_dssp HHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEEE
Confidence 334444432 356799999999999999999999999988776553211 0011111 22368999999
Q ss_pred EcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 131 IDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 131 VDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
|||++|||+|+.++++.|++.|++.+.++++|......+.+++.+.++..++..+.
T Consensus 211 VDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~vv~t~t 266 (284)
T 1u9y_A 211 VDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDT 266 (284)
T ss_dssp EEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEEEETT
T ss_pred EecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEEEEeCC
Confidence 99999999999999999999999999999999887667788887666888777665
No 40
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.64 E-value=9.5e-16 Score=121.74 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=87.7
Q ss_pred hHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCC------CEEEEeccCCCCCceeeeeeeeeccc
Q 029645 39 TLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA------KFVPLRKPNKLPGEVISEAYVLEYGT 112 (190)
Q Consensus 39 ~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~------p~~~~rk~~~~~~~~~~~~~~~~~~~ 112 (190)
.++.+++.++..++.|+.++...++++|+|+++||+.+|..||+.|+. |+..++.......... .......+.
T Consensus 6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~-~~~~~~~g~ 84 (221)
T 2xbu_A 6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSV-GSEVEEVGV 84 (221)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------C
T ss_pred eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccc-cccccccCc
Confidence 456788888999999999995557899999999999999999999998 3434331100000000 000000011
Q ss_pred ceEE---Ee---cCCCCCCCEEEEEcCccCchHHHHHHHHHHHH--------cCC---------eEEEEEEEeecCC
Q 029645 113 DRLE---MH---VGAIEPGERALVIDDLVATGGTLSAAVRLLER--------MGA---------EVVECACVVGLPE 166 (190)
Q Consensus 113 ~~~~---l~---~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~--------~Ga---------~~i~v~vl~~~~~ 166 (190)
..+. +. .....+|++||||||+++||+||.+++++|++ .|+ +.+.+++|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 85 KVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp EEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred eeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 1111 10 02336999999999999999999999999997 776 5899999999974
No 41
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.64 E-value=9e-16 Score=120.19 Aligned_cols=122 Identities=16% Similarity=0.191 Sum_probs=84.8
Q ss_pred hHhcCHHHHHHHHHHHHHHhhc-----------CCCCEEEEeCCCChhhHHHHHHHh----CCCE--EEEeccCCCCCce
Q 029645 39 TLLLDHKAFKDTVDIFVDRYRD-----------MGISVVAGIEARGFVFGPSIALAI----GAKF--VPLRKPNKLPGEV 101 (190)
Q Consensus 39 ~~~~~~~~~~~~~~~la~~i~~-----------~~~d~Iv~i~~gG~~~a~~la~~L----~~p~--~~~rk~~~~~~~~ 101 (190)
.++.+++.++..++.|+..+.+ .+.++|+|+++||+++|..+|+.| ++|+ ..+....... ..
T Consensus 14 ~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~-~~ 92 (201)
T 1w30_A 14 RELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRD-DL 92 (201)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC---
T ss_pred eEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecC-Cc
Confidence 3567888888888888877643 245799999999999999999999 4664 2222211000 00
Q ss_pred eeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcC-CeEEEEEEEeecC
Q 029645 102 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 165 (190)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G-a~~i~v~vl~~~~ 165 (190)
..........+.+. ....+|++|||||||+|||+|+.++++.|++.| ++.+.++++++++
T Consensus 93 ---~~~~~~~~~~~~~~-~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 93 ---MIKPPRPLASTSIP-AGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp ---------CCCCCBCC-TTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ---cccccceeecccCC-CccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 00000000001111 122589999999999999999999999999999 9999999999985
No 42
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.64 E-value=1.1e-15 Score=127.41 Aligned_cols=125 Identities=22% Similarity=0.235 Sum_probs=93.8
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEE
Q 029645 49 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERA 128 (190)
Q Consensus 49 ~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~V 128 (190)
.+++++.+.+.+.+.++|+++..||+.+|..+|+.|++|+.+++|.++.++.. ....+. +. .+|++|
T Consensus 150 ~l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l~-g~-v~gk~v 216 (326)
T 3s5j_B 150 AVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVLV-GD-VKDRVA 216 (326)
T ss_dssp HHHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEEE-SC-CTTSEE
T ss_pred HHHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEecc-cc-CCCCEE
Confidence 44555555543334579999999999999999999999999988766432211 011221 33 589999
Q ss_pred EEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 129 LVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 129 LlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
+||||+++||+|+.++++.|++.|++.+.+++.+......+.+++.+.++..++..+.
T Consensus 217 iIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~t 274 (326)
T 3s5j_B 217 ILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNT 274 (326)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSEEEEETT
T ss_pred EEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCEEEEecC
Confidence 9999999999999999999999999999999998886666778887566766665543
No 43
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.63 E-value=4.3e-15 Score=114.56 Aligned_cols=118 Identities=19% Similarity=0.239 Sum_probs=86.7
Q ss_pred HhHhcCHHHHHHHHHHHHHHhhcC---CCCEEEEeCCCChhhHHHHHHHhCCCEEE--EeccCCCCCceeeeeeeee-cc
Q 029645 38 TTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLE-YG 111 (190)
Q Consensus 38 ~~~~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~a~~la~~L~~p~~~--~rk~~~~~~~~~~~~~~~~-~~ 111 (190)
..++.+.+.++...++||.++.+. +..+++|+.+||+.+|..|++.++.|+.. +.-.. |... ..
T Consensus 10 ~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ss----------y~~~~~~ 79 (181)
T 3acd_A 10 GPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISS----------YGNAFKS 79 (181)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC------------------
T ss_pred ccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEE----------ecCCcCC
Confidence 446678888888888888777532 45689999999999999999999988633 22111 1100 01
Q ss_pred cceEEEe--cCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecC
Q 029645 112 TDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (190)
Q Consensus 112 ~~~~~l~--~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~ 165 (190)
.....+. .....+|++|||||||++||.|++++++.|.+.|++.+.+++|++++
T Consensus 80 ~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~ 135 (181)
T 3acd_A 80 SGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP 135 (181)
T ss_dssp ----CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred CCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcC
Confidence 1111111 12346899999999999999999999999999999999999999975
No 44
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.60 E-value=2e-15 Score=128.57 Aligned_cols=136 Identities=15% Similarity=0.175 Sum_probs=89.9
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCC------Cc----eeeeeeeeecccc-----
Q 029645 49 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP------GE----VISEAYVLEYGTD----- 113 (190)
Q Consensus 49 ~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~------~~----~~~~~~~~~~~~~----- 113 (190)
.+++++.+.+.+.+.++|++++.||+.+|..+|+.|++|+.++++++... +. .....+..+++..
T Consensus 178 ~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~ 257 (379)
T 2ji4_A 178 FLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLI 257 (379)
T ss_dssp HHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC------------------------------------
T ss_pred HHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhh
Confidence 34455555443334679999999999999999999999998886654311 00 0000000000000
Q ss_pred -----eEEEecCCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 114 -----RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 114 -----~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
.+.+. + ..+|++|+||||+++||+|+.++++.|++.|++.+.+++.+......+.+++++.++..++..+.
T Consensus 258 ~~~~~~~~l~-g-~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id~vvvTnt 333 (379)
T 2ji4_A 258 PKEKPPITVV-G-DVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNT 333 (379)
T ss_dssp -----CCCEE-S-CCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCCEEEEESS
T ss_pred hhcccccccc-c-CCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCCEEEEecC
Confidence 00111 2 36899999999999999999999999999999999999988876656777776555666655443
No 45
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.59 E-value=4e-15 Score=123.87 Aligned_cols=112 Identities=21% Similarity=0.260 Sum_probs=82.7
Q ss_pred CCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHH
Q 029645 62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 141 (190)
Q Consensus 62 ~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl 141 (190)
+.++|+++..||+.+|..+|+.|++|+.+++|.+..++.. ..+.+. +. .+|++|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~-g~-v~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII-GE-VEGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc-cc-CCCCEEEEEecccCchHHH
Confidence 4579999999999999999999999998887765322110 011221 23 5899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 142 SAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 142 ~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
.++++.|++.|++.+.+++.|......+.+++++.++..++..+.
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~t 277 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDELVVTDT 277 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEEEEESS
T ss_pred HHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEEEEecc
Confidence 999999999999999999999886667778887667777766554
No 46
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.58 E-value=8.8e-15 Score=121.94 Aligned_cols=112 Identities=21% Similarity=0.287 Sum_probs=84.8
Q ss_pred CCCEEEEeCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHH
Q 029645 62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 141 (190)
Q Consensus 62 ~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl 141 (190)
+.++|++++.||+.+|..+|+.|+.|+..++|.+.... ....+.+. +. .+|++||||||++|||+|+
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~-----------~~~~~~l~-~~-v~gk~VlLVDDiitTG~Tl 233 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPN-----------VAEVMNIV-GN-IEGKTAILIDDIIDTAGTI 233 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE-SC-CTTCEEEEECSEESSCHHH
T ss_pred CCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEecccc-----------ceeEEEec-cc-CCCCEEEEEecccCCCHHH
Confidence 45689999999999999999999999988776542110 01122232 33 5899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEeecCCccccccccCCCeEEEEeccc
Q 029645 142 SAAVRLLERMGAEVVECACVVGLPEVRGQRRLDGKPLYILVEPRL 186 (190)
Q Consensus 142 ~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~~~~~~sl~~~~~ 186 (190)
.++++.|++.|++.+.+++.|......+.+++++.++..++..+.
T Consensus 234 ~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~t 278 (317)
T 1dku_A 234 TLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNS 278 (317)
T ss_dssp HHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEEETT
T ss_pred HHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCEEEEeCC
Confidence 999999999999999999966665445667776666777766554
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.56 E-value=1.7e-14 Score=127.06 Aligned_cols=120 Identities=18% Similarity=0.170 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEE-EeccCCCCCceeee--eeeeecccceEEEec
Q 029645 43 DHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISE--AYVLEYGTDRLEMHV 119 (190)
Q Consensus 43 ~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~-~rk~~~~~~~~~~~--~~~~~~~~~~~~l~~ 119 (190)
+..+.+.+++.+.+.+...++|+|+++|.+|+.+|..+|+.+++|+.. +.|++.....+... ..+...-...+...
T Consensus 275 r~~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~- 353 (504)
T 1ecf_A 275 RVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNAN- 353 (504)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEEC-
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhccc-
Confidence 344444555555544433457999999999999999999999999862 22222211111000 00000001123322
Q ss_pred CCCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029645 120 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 163 (190)
Q Consensus 120 ~~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~ 163 (190)
....+||+||||||++|||+|+.+++++|+++|++.+.+++++.
T Consensus 354 ~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~ 397 (504)
T 1ecf_A 354 RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP 397 (504)
T ss_dssp GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSC
T ss_pred cccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEec
Confidence 22358999999999999999999999999999999999988753
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.44 E-value=2.5e-13 Score=118.40 Aligned_cols=115 Identities=23% Similarity=0.268 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEE-EeccCCCCCceeeeeee-eecc-cceEEEecCCC
Q 029645 46 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYV-LEYG-TDRLEMHVGAI 122 (190)
Q Consensus 46 ~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~-~rk~~~~~~~~~~~~~~-~~~~-~~~~~l~~~~~ 122 (190)
....+++.+++.+. .+.|+|+++|.+|..+|..+|+.+++|+.. +.|.+....+....... +... ...+..... .
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~-~ 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRG-V 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECHH-H
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccccc-c
Confidence 45667777777664 367999999999999999999999999863 33333211111000000 0001 112332112 2
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~ 162 (190)
.+||+||||||++|||+|+.+++++|+++|++.+.+++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 5899999999999999999999999999999999998854
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.41 E-value=1e-13 Score=110.50 Aligned_cols=113 Identities=9% Similarity=0.156 Sum_probs=81.5
Q ss_pred HhHhcCHHHHHHHHHHHHHHhhc---C--CCCEEEEeCCCChhhHHHHHHHhCCCEEE--EeccCCCCCceeeeeeeeec
Q 029645 38 TTLLLDHKAFKDTVDIFVDRYRD---M--GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEY 110 (190)
Q Consensus 38 ~~~~~~~~~~~~~~~~la~~i~~---~--~~d~Iv~i~~gG~~~a~~la~~L~~p~~~--~rk~~~~~~~~~~~~~~~~~ 110 (190)
..++.+++.+...++.|++++.+ . +.++|+|+++||+.+|..+++.|+.|+.. ++.. +|...
T Consensus 32 ~~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs----------~y~~~- 100 (230)
T 1dqn_A 32 FHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS----------SYKGT- 100 (230)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE----------EEECS-
T ss_pred ccEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEE----------EeCCC-
Confidence 34566888888888888877753 1 46799999999999999999999999643 2211 11100
Q ss_pred ccceEEE-ecC--CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 111 GTDRLEM-HVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 111 ~~~~~~l-~~~--~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
.+....+ ..+ ...+||+||||||+++||.||.++++.|++ +.++++++++.
T Consensus 101 ~s~~v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 101 RQESVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp SCEEEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred ccCceEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 0111222 111 125899999999999999999999999987 77888999873
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.25 E-value=6.9e-11 Score=92.91 Aligned_cols=99 Identities=20% Similarity=0.233 Sum_probs=70.8
Q ss_pred CCEEEEeCCCChhhHHHHHHHhC-CCEEEEeccCCCCCceeeeeeeeecccceE-EEecCCCCCCCEEEEEcCccCchHH
Q 029645 63 ISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT 140 (190)
Q Consensus 63 ~d~Iv~i~~gG~~~a~~la~~L~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLlVDDvvtTG~T 140 (190)
..+++++.++|+.++..+.+.+. .++..+.+.+... ..+... ....+...+|++||||||+++||+|
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~~-----------t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T 139 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQ-----------TLKPVEYYVKLPSDVEERDFIIVDPMLATGGS 139 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCTT-----------CSSCEEEEEECCTTTTTSEEEEECSEESSSHH
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcCC-----------CCceEEEEEcCCCccCCCEEEEEcCCCcCHHH
Confidence 34789999999999999999883 4443433222110 011111 2222334689999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEEEeecCCcccccccc
Q 029645 141 LSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 141 l~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~ 174 (190)
+.++++.|++.|++.+.+++++..+ .|.+++.
T Consensus 140 ~~~a~~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 171 (209)
T 1i5e_A 140 AVAAIDALKKRGAKSIKFMCLIAAP--EGVKAVE 171 (209)
T ss_dssp HHHHHHHHHHTTCCCEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHH
Confidence 9999999999999988888887765 5666654
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.12 E-value=1.3e-10 Score=91.86 Aligned_cols=97 Identities=18% Similarity=0.242 Sum_probs=71.1
Q ss_pred EEEEeCCCChhhHHHHHHHh-CCCEEEEeccCCCCCceeeeeeeeecccceE-EEecCCCCCCCEEEEEcCccCchHHHH
Q 029645 65 VVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLS 142 (190)
Q Consensus 65 ~Iv~i~~gG~~~a~~la~~L-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLlVDDvvtTG~Tl~ 142 (190)
++|+|.++|+.++..+++.+ +.++..+...+... .++... ...-+...+|++|+||||+++||+|+.
T Consensus 85 viV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~ 153 (221)
T 1o5o_A 85 VVVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSI 153 (221)
T ss_dssp EEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHHHH
Confidence 78999999999999999998 45554433222100 011111 112233468999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEEEeecCCcccccccc
Q 029645 143 AAVRLLERMGAEVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 143 ~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~ 174 (190)
++++.|++.|++.+.+++++..+ .|.+++.
T Consensus 154 ~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 183 (221)
T 1o5o_A 154 KAIEILKENGAKKITLVALIAAP--EGVEAVE 183 (221)
T ss_dssp HHHHHHHHTTCCEEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 99999999999999998888765 5666654
No 52
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.05 E-value=9.2e-10 Score=86.34 Aligned_cols=96 Identities=22% Similarity=0.275 Sum_probs=69.3
Q ss_pred EEEEeCCCChhhHHHHHHHhCC-CEEEEeccCCCCCceeeeeeeeecccceE-EEecCCCCCCCEEEEEcCccCchHHHH
Q 029645 65 VVAGIEARGFVFGPSIALAIGA-KFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLS 142 (190)
Q Consensus 65 ~Iv~i~~gG~~~a~~la~~L~~-p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLlVDDvvtTG~Tl~ 142 (190)
++|+|.++|+.++..+.+.+.- ++..+.-.+.. ..++... ....+ ..+|++|+||||+++||+|+.
T Consensus 71 ~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~-----------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~ 138 (208)
T 2e55_A 71 VFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNE-----------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLE 138 (208)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCEECEEEEEECT-----------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEec-----------CCCceEEEecCCC-CCCCCEEEEECCccccHHHHH
Confidence 7899999999999999998862 22112111100 0111122 12224 568999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEEEeecCCcccccccc
Q 029645 143 AAVRLLERMGAEVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 143 ~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~ 174 (190)
++++.|++.|++.+.+++++..+ .|.+++.
T Consensus 139 ~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 168 (208)
T 2e55_A 139 VALREILKHSPLKVKSVHAIAAP--EGLKRIE 168 (208)
T ss_dssp HHHHHHHTTCBSEEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEEECH--HHHHHHH
Confidence 99999999999999999998876 5666654
No 53
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.05 E-value=9.4e-10 Score=86.27 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=69.4
Q ss_pred CEEEEeCCCChhhHHHHHHHhCC-CEEEEeccCCCCCceeeeeeeeecccceEEE-ecCCCCCCCEEEEEcCccCchHHH
Q 029645 64 SVVAGIEARGFVFGPSIALAIGA-KFVPLRKPNKLPGEVISEAYVLEYGTDRLEM-HVGAIEPGERALVIDDLVATGGTL 141 (190)
Q Consensus 64 d~Iv~i~~gG~~~a~~la~~L~~-p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~gk~VLlVDDvvtTG~Tl 141 (190)
-++|+|.++|+.++..+.+.+.- ++-.+.-.+.. ..++...+. .-+...+|++|+||||+++||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~-----------~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~ 139 (208)
T 2ehj_A 71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYRNE-----------ETLEPVPYFQKLVSNIDERMALIVDPMLATGGSV 139 (208)
T ss_dssp CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECT-----------TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHH
T ss_pred eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcC-----------CCCceEEEecCCCCccCCCEEEEECCccccHHHH
Confidence 38999999999999999998752 22111111100 011112211 123345899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEeecCCcccccccc
Q 029645 142 SAAVRLLERMGAEVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 142 ~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~ 174 (190)
.++++.|++.|++.+.+++++..+ .|.+++.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~p--~g~~~l~ 170 (208)
T 2ehj_A 140 IATIDLLKKAGCSSIKVLVLVAAP--EGIAALE 170 (208)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 999999999999999999998876 4666653
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.97 E-value=7.6e-10 Score=86.81 Aligned_cols=98 Identities=22% Similarity=0.270 Sum_probs=67.9
Q ss_pred CEEEEeCCCChhhHHHHHHHhCC-CEEEEeccCCCCCceeeeeeeeecccceE-EEecCCCCCCCEEEEEcCccCchHHH
Q 029645 64 SVVAGIEARGFVFGPSIALAIGA-KFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL 141 (190)
Q Consensus 64 d~Iv~i~~gG~~~a~~la~~L~~-p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLlVDDvvtTG~Tl 141 (190)
-++|+|.++|+.++..+.+.+.- ++..+.-.+.. ..++... ...-+...+|++|+||||+++||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd~-----------~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~ 139 (208)
T 1v9s_A 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYRDP-----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSA 139 (208)
T ss_dssp CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHH
T ss_pred eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEcC-----------CCCCceEEeccCCCccCCCEEEEECCccccHHHH
Confidence 38999999999999999888752 22222111100 0011111 11113345899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEeecCCcccccccc
Q 029645 142 SAAVRLLERMGAEVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 142 ~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~ 174 (190)
.++++.|++.|++.+.+++++..+ .|.+++.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 170 (208)
T 1v9s_A 140 SLALSLLKERGATGVKLMAILAAP--EGLERIA 170 (208)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 999999999999988999998876 5666654
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.93 E-value=3.2e-09 Score=85.03 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=68.4
Q ss_pred EEEEeCCCChhhHHHHHHHhC-CCEEEEeccCCCCCceeeeeeeeecccceEE-EecCCCCCCCEEEEEcCccCchHHHH
Q 029645 65 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLE-MHVGAIEPGERALVIDDLVATGGTLS 142 (190)
Q Consensus 65 ~Iv~i~~gG~~~a~~la~~L~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~gk~VLlVDDvvtTG~Tl~ 142 (190)
++|+|.++|+.++..+.+.+. .++-.+.-.+.. ..++..++ ..-+...+|++|+||||+++||+|+.
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~-----------~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~~ 173 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRDE-----------TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVC 173 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECS-----------SSCCEEEEEEECCTTGGGSEEEEECSEESSCHHHH
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcC-----------CCCCeEEEeccCCcccCCCEEEEECCccccHHHHH
Confidence 688999999999999999885 233222111100 01111221 11233458999999999999999999
Q ss_pred HHHHHHHHcCC--eEEEEEEEeecCCcccccccc
Q 029645 143 AAVRLLERMGA--EVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 143 ~~~~~L~~~Ga--~~i~v~vl~~~~~~~g~~~l~ 174 (190)
++++.|++.|+ +.+.+++++..+ .|.+++.
T Consensus 174 ~ai~~L~~~G~~p~~I~~~~lvaap--~g~~~l~ 205 (243)
T 1bd3_D 174 KAIEVLLRLGVKEERIIFVNILAAP--QGIERVF 205 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHcCCCcceEEEEEEEeCH--HHHHHHH
Confidence 99999999999 888888888765 5666654
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.80 E-value=7.2e-09 Score=81.67 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=66.8
Q ss_pred EEEEeCCCChhhHHHHHHHhC-CCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCchHHHHH
Q 029645 65 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA 143 (190)
Q Consensus 65 ~Iv~i~~gG~~~a~~la~~L~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG~Tl~~ 143 (190)
++|+|.++|..++..+.+.+. .++-.+.-.+... + ........-+ ...|++|+|+||++.||+|+.+
T Consensus 80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~----------t-~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ 147 (217)
T 3dmp_A 80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADD----------H-RPVEYLVRLP-DLEDRIFILCDPMVATGYSAAH 147 (217)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTSEECEEECSCCCS----------S-SCCCSEEECC-CCTTCEEEEECSEESSSHHHHH
T ss_pred EEEEecccchHHHHHHHHhCcCCceeEEEEEECCC----------C-CcEEEeecCC-CCCCCEEEEEcCcccccHHHHH
Confidence 688999999999999999974 3433322111100 0 0000111124 4689999999999999999999
Q ss_pred HHHHHHHcCC--eEEEEEEEeecCCcccccccc
Q 029645 144 AVRLLERMGA--EVVECACVVGLPEVRGQRRLD 174 (190)
Q Consensus 144 ~~~~L~~~Ga--~~i~v~vl~~~~~~~g~~~l~ 174 (190)
+++.|++.|+ +.+.+++++..+ .|.+++.
T Consensus 148 ai~~L~~~G~pe~~I~~~~~vaa~--egl~~l~ 178 (217)
T 3dmp_A 148 AIDVLKRRGVPGERLMFLALVAAP--EGVQVFQ 178 (217)
T ss_dssp HHHHHHTTTCCGGGEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHcCCCcCeEEEEEEEeCH--HHHHHHH
Confidence 9999999999 778888887754 5655543
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.66 E-value=6.8e-08 Score=76.08 Aligned_cols=107 Identities=9% Similarity=0.043 Sum_probs=69.4
Q ss_pred CEEEEeCCCChhhHHHHHHHhCC-CEEEE--eccCCCCCceeeeeeeeecccceE-EEecCCCCCCC--EEEEEcCccCc
Q 029645 64 SVVAGIEARGFVFGPSIALAIGA-KFVPL--RKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGE--RALVIDDLVAT 137 (190)
Q Consensus 64 d~Iv~i~~gG~~~a~~la~~L~~-p~~~~--rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk--~VLlVDDvvtT 137 (190)
-++|+|.++|..++..+...+.- ++..+ .+....... .. ...+... +..-+ ..+++ +|+|+||++.|
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~---~~---~~~~p~~~y~klP-~i~~~~~~VilvDp~laT 145 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKE---VP---KDMDVYIYYKKIP-DIRAKVDNVIIADPMIAT 145 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSS---CC---SCCCEEEEEEECC-CCCTTTCEEEEECSEESS
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccc---cc---cccCceEeeccCC-CccCCcceEEEEcCCccc
Confidence 37889999999999999988742 33222 111100000 00 0001111 11223 45788 99999999999
Q ss_pred hHHHHHHHHHHHHcCC-eEEEEEEEeecCCcccccccc----CCCeEE
Q 029645 138 GGTLSAAVRLLERMGA-EVVECACVVGLPEVRGQRRLD----GKPLYI 180 (190)
Q Consensus 138 G~Tl~~~~~~L~~~Ga-~~i~v~vl~~~~~~~g~~~l~----~~~~~s 180 (190)
|+|+.++++.|++ |+ +.+.+++++.-+ .|.+++. ++.++.
T Consensus 146 G~T~~~ai~~L~~-G~p~~I~~~~~vaa~--~gl~~l~~~~P~v~I~t 190 (216)
T 1xtt_A 146 ASTMLKVLEEVVK-ANPKRIYIVSIISSE--YGVNKILSKYPFIYLFT 190 (216)
T ss_dssp SHHHHHHHHHHGG-GCCSEEEEECSEEEH--HHHHHHHHHCTTSEEEE
T ss_pred hHHHHHHHHHHHh-CCCCeEEEEEEecCH--HHHHHHHHHCCCcEEEE
Confidence 9999999999999 98 888888887755 5666653 455544
No 58
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=80.57 E-value=17 Score=29.57 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=48.5
Q ss_pred CCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCch----HHHHHHH
Q 029645 70 EARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATG----GTLSAAV 145 (190)
Q Consensus 70 ~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG----~Tl~~~~ 145 (190)
..+.-.+|..+|..||+|+..+.-.+-. .|+..+++ ....+|+.|.||-.....- --+.-++
T Consensus 13 g~~~~~La~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~i 78 (319)
T 3dah_A 13 GNANPALAQEVVKILGIPLGKAMVSRFS------------DGEIQVEI--QENVRGKDVFVLQSTCAPTNDNLMELMIMV 78 (319)
T ss_dssp CSSCHHHHHHHHHHHTSCCCCEEEEECT------------TSCEEEEE--CSCCBTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCceeeeEEEECC------------CCCEEEEE--CCCcCCCeEEEEccCCCCCcHHHHHHHHHH
Confidence 3445579999999999987543222211 12223333 3446899999997765431 1255677
Q ss_pred HHHHHcCCeEEEEE
Q 029645 146 RLLERMGAEVVECA 159 (190)
Q Consensus 146 ~~L~~~Ga~~i~v~ 159 (190)
++++.++|+.+.+.
T Consensus 79 dA~k~asA~rIt~V 92 (319)
T 3dah_A 79 DALKRASAGRITAA 92 (319)
T ss_dssp HHHHHTTBSEEEEE
T ss_pred HHHHHcCCcEEEEE
Confidence 88899999887653
No 59
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=76.20 E-value=19 Score=28.62 Aligned_cols=74 Identities=8% Similarity=0.028 Sum_probs=47.2
Q ss_pred CChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCc-hH--HHHHHHHHH
Q 029645 72 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG--TLSAAVRLL 148 (190)
Q Consensus 72 gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtT-G~--Tl~~~~~~L 148 (190)
+.-.+|..+|..||+|+..+...+-.. |+..+++ ....+|+.|.|+-..... -. -+.-+++++
T Consensus 8 ~~~~la~~ia~~l~~~l~~~~~~~F~d------------GE~~v~i--~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~ 73 (284)
T 1u9y_A 8 QSQNLAFKVAKLLNTKLTRVEYKRFPD------------NEIYVRI--VDEINDDEAVIINTQKNQNDAIVETILLCDAL 73 (284)
T ss_dssp TCHHHHHHHHHHTTCCEECEEEEECTT------------CCEEEEE--CSCCCSSEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCeeeeeEEEECCC------------CCEEEEe--CCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 345789999999999987543322111 2222333 334589999999886542 12 244567888
Q ss_pred HHcCCeEEEEE
Q 029645 149 ERMGAEVVECA 159 (190)
Q Consensus 149 ~~~Ga~~i~v~ 159 (190)
+.++|+.+.+.
T Consensus 74 ~~~~a~~i~~v 84 (284)
T 1u9y_A 74 RDEGVKKITLV 84 (284)
T ss_dssp HTTTCCEEEEE
T ss_pred HHcCCceEEEE
Confidence 89999876543
No 60
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=73.11 E-value=37 Score=27.73 Aligned_cols=75 Identities=13% Similarity=0.107 Sum_probs=46.4
Q ss_pred CCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCc--hH--HHHHHHH
Q 029645 71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GG--TLSAAVR 146 (190)
Q Consensus 71 ~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtT--G~--Tl~~~~~ 146 (190)
.+.-.+|..+|..||+|+..+.-.+-. .|+..+++ ....+|+.|.||-..... -. -+.-+++
T Consensus 10 ~~~~~La~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~id 75 (326)
T 3s5j_B 10 SSHQDLSQKIADRLGLELGKVVTKKFS------------NQETCVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMIN 75 (326)
T ss_dssp SSCCHHHHHHHHHTTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEeECC------------CCCEEEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHH
Confidence 344578999999999987543222211 12223333 344689999999765432 11 2335667
Q ss_pred HHHHcCCeEEEEE
Q 029645 147 LLERMGAEVVECA 159 (190)
Q Consensus 147 ~L~~~Ga~~i~v~ 159 (190)
+++.++|+.+.+.
T Consensus 76 A~k~asA~rIt~V 88 (326)
T 3s5j_B 76 ACKIASASRVTAV 88 (326)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHhcCCcEEEEe
Confidence 7889999887653
No 61
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=56.14 E-value=60 Score=26.93 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=46.1
Q ss_pred CCChhhHHH---HHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCc--hH--HHHH
Q 029645 71 ARGFVFGPS---IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GG--TLSA 143 (190)
Q Consensus 71 ~gG~~~a~~---la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtT--G~--Tl~~ 143 (190)
.+.-.+|.. +|..||+|+..+.-.+-. .|+..+.+ ....+|+.|.||-..... .. -+.-
T Consensus 36 ~~~~~la~~~~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~~~nd~lmeLl~ 101 (379)
T 2ji4_A 36 NSNSSCMELSKKIAERLGVEMGKVQVYQEP------------NRETRVQI--QESVRGKDVFIIQTVSKDVNTTIMELLI 101 (379)
T ss_dssp CCSGGGGHHHHHHHHHHTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHhCCceEeeEEEECC------------CCCEEEEe--CCCcCCCEEEEEeCCCCCccHHHHHHHH
Confidence 334467888 999999986543222211 12223333 334689999999886541 22 3445
Q ss_pred HHHHHHHcCCeEEEEE
Q 029645 144 AVRLLERMGAEVVECA 159 (190)
Q Consensus 144 ~~~~L~~~Ga~~i~v~ 159 (190)
++++++.++|+.+.++
T Consensus 102 ~idA~k~asA~rit~V 117 (379)
T 2ji4_A 102 MVYACKTSCAKSIIGV 117 (379)
T ss_dssp HHHHHHHTTCSEEEEE
T ss_pred HHHHHHhcCCceEEEE
Confidence 5678889999886643
No 62
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=52.57 E-value=90 Score=25.11 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=47.5
Q ss_pred eCCCChhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCch--H--HHHHH
Q 029645 69 IEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATG--G--TLSAA 144 (190)
Q Consensus 69 i~~gG~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtTG--~--Tl~~~ 144 (190)
...+.-.+|..+|..||+|+..+.-.+-. .|+..+.+ ....+|+.|.||-.....- . -+.-+
T Consensus 14 ~~~~~~~la~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~e~vrg~dv~iiqs~~~~~nd~lmell~~ 79 (317)
T 1dku_A 14 SLNSNPELAKEIADIVGVQLGKCSVTRFS------------DGEVQINI--EESIRGCDCYIIQSTSDPVNEHIMELLIM 79 (317)
T ss_dssp ECSSCHHHHHHHHHHHTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSSHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHhCCeeEeeEEEECC------------CCCEEEEe--cCCCCCCEEEEEcCCCCCCcHHHHHHHHH
Confidence 34455689999999999987554322211 12222333 3446899999988754421 1 23445
Q ss_pred HHHHHHcCCeEEEEEE
Q 029645 145 VRLLERMGAEVVECAC 160 (190)
Q Consensus 145 ~~~L~~~Ga~~i~v~v 160 (190)
+++++..+++.+.++.
T Consensus 80 ~~a~~~~~a~~i~av~ 95 (317)
T 1dku_A 80 VDALKRASAKTINIVI 95 (317)
T ss_dssp HHHHHHTTCSEEEEEE
T ss_pred HHHhhccCcceEEEEE
Confidence 6777888888766543
No 63
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=52.18 E-value=28 Score=27.79 Aligned_cols=70 Identities=9% Similarity=-0.066 Sum_probs=42.1
Q ss_pred hhhHHHHHHHhCCCEEEEeccCCCCCceeeeeeeeecccceEEEecCCCCCCCEEEEEcCccCc--hH--HHHHHHHHHH
Q 029645 74 FVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GG--TLSAAVRLLE 149 (190)
Q Consensus 74 ~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLlVDDvvtT--G~--Tl~~~~~~L~ 149 (190)
-.+|..+|..||+|+..+.-.+-. .|+..+++ +.. |+.|.||--.... -. -+.-++++++
T Consensus 10 ~~la~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~k 73 (286)
T 3lrt_A 10 LKLAARIAEELKTEPVMPDERRFP------------DGELYLRY--DED--LTGHNIFIIGNTHSDAEVMEMILTLSAIQ 73 (286)
T ss_dssp HHHHHHHHHHTTSCEECCEEEECT------------TSCEEEEC--CSC--CTTSEEEEECCCCSHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCeeeeEEEECC------------CCCEEEEE--cCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 468999999999998654322211 12222332 222 8888888654432 11 1445678888
Q ss_pred HcCCeEEEEE
Q 029645 150 RMGAEVVECA 159 (190)
Q Consensus 150 ~~Ga~~i~v~ 159 (190)
.+||+.+.+.
T Consensus 74 ~~~A~~it~V 83 (286)
T 3lrt_A 74 DYRTKSVNII 83 (286)
T ss_dssp GSCCSEEEEE
T ss_pred HcCCCEEEEE
Confidence 9999876553
No 64
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=49.28 E-value=36 Score=28.06 Aligned_cols=48 Identities=6% Similarity=-0.087 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 44 HKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 44 ~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
......+...+.+.+.+.+||+|+........++...|..+++|++.+
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 344445555666666667899999987665666666778889998764
No 65
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=49.19 E-value=36 Score=22.00 Aligned_cols=27 Identities=30% Similarity=0.297 Sum_probs=15.0
Q ss_pred CEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 126 ERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 126 k~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
++||||||=-.. .......|++.|..+
T Consensus 3 ~~ilivdd~~~~---~~~l~~~L~~~g~~v 29 (120)
T 3f6p_A 3 KKILVVDDEKPI---ADILEFNLRKEGYEV 29 (120)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CeEEEEECCHHH---HHHHHHHHHhCCEEE
Confidence 578888875433 333344555566543
No 66
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=46.88 E-value=32 Score=21.90 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=30.3
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
+..|..|+=|++.-.+|.|..++.++|++.|-.+
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEE
Confidence 4589999999999999999999999999777654
No 67
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=46.55 E-value=42 Score=21.80 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=15.5
Q ss_pred CEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 126 ERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 126 k~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
++||||||=-.. .......|++.|..+
T Consensus 3 ~~ILivdd~~~~---~~~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSAVL---RKIVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred ceEEEEeCCHHH---HHHHHHHHHHCCcEE
Confidence 578888885433 333444555666544
No 68
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=46.24 E-value=44 Score=21.72 Aligned_cols=29 Identities=21% Similarity=0.294 Sum_probs=19.1
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
++.+||||||=-.. .....+.|.+.|..+
T Consensus 6 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~v 34 (130)
T 3eod_A 6 VGKQILIVEDEQVF---RSLLDSWFSSLGATT 34 (130)
T ss_dssp TTCEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHhCCceE
Confidence 57789999986544 344455566677654
No 69
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=42.94 E-value=21 Score=24.87 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=19.3
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCeEE
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
++-+||||||--+.- ......|++.|..++
T Consensus 11 k~~rILiVDD~~~~r---~~l~~~L~~~G~~~v 40 (134)
T 3to5_A 11 KNMKILIVDDFSTMR---RIVKNLLRDLGFNNT 40 (134)
T ss_dssp TTCCEEEECSCHHHH---HHHHHHHHHTTCCCE
T ss_pred CCCEEEEEeCCHHHH---HHHHHHHHHcCCcEE
Confidence 455899999965553 334455667776543
No 70
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=41.89 E-value=49 Score=21.97 Aligned_cols=28 Identities=14% Similarity=0.331 Sum_probs=15.4
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
++.+||||||=-.. .......|.+.|..
T Consensus 4 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQ---AKTIANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHH---HHHHHHHHHHcCCE
Confidence 45678888885544 33344445555654
No 71
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=39.94 E-value=1.3e+02 Score=23.33 Aligned_cols=77 Identities=14% Similarity=0.049 Sum_probs=45.7
Q ss_pred CCChhHHHHhhccccc---CCCCCCCceEEecHhHhcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHh-
Q 029645 9 RGDPRLQGISKAIRVV---PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI- 84 (190)
Q Consensus 9 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L- 84 (190)
-+||-++.+.+-++.. .+|...-..-++..+--.|+.....+++.+. ..++|+|+++.. +-+..++...
T Consensus 17 ~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~----~~~~DlIiai~t---~aa~a~~~~~~ 89 (302)
T 3lkv_A 17 VEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFV----GENPDVLVGIAT---PTAQALVSATK 89 (302)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHH----TTCCSEEEEESH---HHHHHHHHHCS
T ss_pred ecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHH----hcCCcEEEEcCC---HHHHHHHhhcC
Confidence 3688888777766432 3444322344455555568877766666554 457999998864 2233333332
Q ss_pred CCCEEEEe
Q 029645 85 GAKFVPLR 92 (190)
Q Consensus 85 ~~p~~~~r 92 (190)
++|+++..
T Consensus 90 ~iPVVf~~ 97 (302)
T 3lkv_A 90 TIPIVFTA 97 (302)
T ss_dssp SSCEEEEE
T ss_pred CCCeEEEe
Confidence 57987753
No 72
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=39.32 E-value=58 Score=21.08 Aligned_cols=28 Identities=36% Similarity=0.393 Sum_probs=14.3
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
++.+||||||=-... ....+.|.+.|..
T Consensus 5 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~ 32 (132)
T 3lte_A 5 QSKRILVVDDDQAMA---AAIERVLKRDHWQ 32 (132)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHHHTTCE
T ss_pred CCccEEEEECCHHHH---HHHHHHHHHCCcE
Confidence 356788888754443 3333444555554
No 73
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=38.27 E-value=75 Score=20.09 Aligned_cols=28 Identities=32% Similarity=0.525 Sum_probs=14.9
Q ss_pred CCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 125 GERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 125 gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
+.+||||||=-.....+ ...|...|..+
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~l~~~g~~v 29 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMML---KDIITKAGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CceEEEEcCcHHHHHHH---HHHHhhcCcEE
Confidence 35688888754443333 33444556553
No 74
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=37.82 E-value=65 Score=21.23 Aligned_cols=43 Identities=14% Similarity=0.090 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029645 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 163 (190)
Q Consensus 121 ~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~ 163 (190)
.+..|..|+=|++.-..|.|-.++.++|++.......++.|+.
T Consensus 46 ~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 46 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 4568999999999999999999999999997654444555554
No 75
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=35.66 E-value=58 Score=21.43 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcC---CeEEEE
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMG---AEVVEC 158 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G---a~~i~v 158 (190)
+..|..|+=|++.-.++.|...+.++|+..+ ...+.+
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l 99 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEI 99 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEE
Confidence 5689999999999999999999999999987 444443
No 76
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=35.03 E-value=66 Score=25.25 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
.+|+++|| +.+|++.++++-.|.+.|+..+. ++++..
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i~---i~nRt~ 159 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASIT---LCDPST 159 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEE---EECSCH
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeEE---EeCCCH
Confidence 47899986 58999999999999999987654 456643
No 77
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=34.42 E-value=82 Score=19.44 Aligned_cols=10 Identities=10% Similarity=0.245 Sum_probs=6.0
Q ss_pred CEEEEEcCcc
Q 029645 126 ERALVIDDLV 135 (190)
Q Consensus 126 k~VLlVDDvv 135 (190)
.+||||||=-
T Consensus 2 ~~iliv~~~~ 11 (119)
T 2j48_A 2 GHILLLEEED 11 (119)
T ss_dssp CEEEEECCCH
T ss_pred CEEEEEeCCH
Confidence 4666666643
No 78
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=34.38 E-value=1.1e+02 Score=24.66 Aligned_cols=36 Identities=19% Similarity=0.030 Sum_probs=23.8
Q ss_pred HHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 56 DRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 56 ~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
..+++.++|+|++...---.++...|..+++|++..
T Consensus 86 ~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 86 RVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 345556899998864332234555678889998764
No 79
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=33.22 E-value=97 Score=24.83 Aligned_cols=42 Identities=14% Similarity=0.044 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEe
Q 029645 50 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (190)
Q Consensus 50 ~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~r 92 (190)
....+.+.+.+.++|+|+. ...-...+..+|..+++|++.+.
T Consensus 106 ~~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 106 VLRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 3445555566668999984 31222346677889999987753
No 80
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=32.99 E-value=82 Score=21.36 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=19.6
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCeEE
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
...+||||||=-.. .....+.|++.|..++
T Consensus 35 ~~~~Ilivdd~~~~---~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDSVFT---VKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCCHHH---HHHHHHHHHhCCCeEE
Confidence 34589999995443 4555566667776654
No 81
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.75 E-value=78 Score=21.38 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=15.2
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
+..+||||||=-.. .....+.|++.|..
T Consensus 6 ~~~~ILivdd~~~~---~~~l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ---AEHLKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHTTTCE
T ss_pred CCCcEEEEeCCHHH---HHHHHHHHHHCCCE
Confidence 34678888885443 33344445555654
No 82
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=32.35 E-value=1.1e+02 Score=24.08 Aligned_cols=40 Identities=18% Similarity=0.030 Sum_probs=27.0
Q ss_pred HHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 51 ~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
...+.+.+.+.++|+|+.=. .....+..+|..+++|++..
T Consensus 91 ~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp HHHHHHHHTTCCCSEEEEES-TTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCCEEEECc-hHHHHHHHHHHhhCCCEEEE
Confidence 34455556666899998731 22344677889999998775
No 83
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=31.94 E-value=88 Score=24.98 Aligned_cols=38 Identities=13% Similarity=-0.075 Sum_probs=26.0
Q ss_pred HHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 52 DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 52 ~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
..+...+++.++|+|++-. ....+...|..+++|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 4445555556899998863 3334667788999998764
No 84
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.68 E-value=1e+02 Score=20.15 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=15.8
Q ss_pred CCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 125 GERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 125 gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
..+||||||=-.. .....+.|.+.|..
T Consensus 6 ~~~iLivdd~~~~---~~~l~~~l~~~g~~ 32 (140)
T 3grc_A 6 RPRILICEDDPDI---ARLLNLMLEKGGFD 32 (140)
T ss_dssp CSEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCCEEEEcCCHHH---HHHHHHHHHHCCCe
Confidence 4678888885444 33344455556654
No 85
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=31.33 E-value=13 Score=28.76 Aligned_cols=20 Identities=35% Similarity=0.533 Sum_probs=14.6
Q ss_pred EcCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 131 IDDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 131 VDDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
|=|++.||+||+ .+|.+++.
T Consensus 146 IvDivsTG~TLr-------aNgL~~ie 165 (219)
T 1o63_A 146 IVDITETGRTLK-------ENNLEILD 165 (219)
T ss_dssp EEEEESSSHHHH-------HTTEEEEE
T ss_pred eEEeeccHHHHH-------HCCCEEee
Confidence 338999999975 56776653
No 86
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=31.30 E-value=1.1e+02 Score=24.30 Aligned_cols=38 Identities=18% Similarity=0.208 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 52 DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 52 ~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
..+.+.+++.++|+|++-.. ...+..+|..+++|++..
T Consensus 97 ~~l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 97 PRMLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 33444444458999998543 345667889999998764
No 87
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=31.25 E-value=92 Score=20.20 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=17.1
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
...+||||||=-... ....+.|++.|..+
T Consensus 6 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~v 34 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNR---EALILYLKSRGIDA 34 (136)
T ss_dssp -CCEEEEECSCHHHH---HHHHHHHHHTTCCE
T ss_pred CCCeEEEECCCHHHH---HHHHHHHHHcCceE
Confidence 346789998865543 34445555566554
No 88
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=31.22 E-value=77 Score=25.96 Aligned_cols=34 Identities=18% Similarity=0.024 Sum_probs=25.0
Q ss_pred HHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 56 DRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 56 ~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
..+++.++|+|++-. ++..+..+|..+|+|++.+
T Consensus 138 ~~~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 138 SFCRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 334445799998765 3467788999999998765
No 89
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=31.18 E-value=1.6e+02 Score=25.04 Aligned_cols=56 Identities=7% Similarity=0.089 Sum_probs=36.0
Q ss_pred cHhHhcCHHHHHHHHHHHHHHhhc---------------CCCCEEEEeCCCC-hhhHHHHHHHhCCCEEEEe
Q 029645 37 ITTLLLDHKAFKDTVDIFVDRYRD---------------MGISVVAGIEARG-FVFGPSIALAIGAKFVPLR 92 (190)
Q Consensus 37 ~~~~~~~~~~~~~~~~~la~~i~~---------------~~~d~Iv~i~~gG-~~~a~~la~~L~~p~~~~r 92 (190)
+..+.+.....+.+...+...... ...-++.|++..| -.+|..+|..++.+++.+.
T Consensus 38 ~~dliG~~~~~~~L~~~l~~~~~~~~~~~~~~g~~~~~~~~~lLL~GppGtGKTtla~~la~~l~~~~i~in 109 (516)
T 1sxj_A 38 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQN 109 (516)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHhcCCHHHHHHHHHHHHHhHhhchhhccccCccCCCCCcEEEEECCCCCCHHHHHHHHHHHcCCCEEEEe
Confidence 455667777777776666532110 1223567777655 4688999999998877653
No 90
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=31.06 E-value=1.3e+02 Score=24.24 Aligned_cols=39 Identities=21% Similarity=0.137 Sum_probs=27.2
Q ss_pred HHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 51 ~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
...+.+.+++.++|+||.=.. +..+..+|+.+|+|.+.+
T Consensus 98 ~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~ 136 (424)
T 2iya_A 98 LPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQL 136 (424)
T ss_dssp HHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEE
Confidence 344444555568999998553 345778899999998765
No 91
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=30.73 E-value=58 Score=21.14 Aligned_cols=31 Identities=32% Similarity=0.292 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
.+++.|+++++ +|.....+...|+..|-+.+
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v 80 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHV 80 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCE
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCE
Confidence 35677888864 78888999999999998643
No 92
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=30.73 E-value=1.1e+02 Score=24.42 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 52 DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 52 ~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
..+...+++.++|+|++-+ ....+..+|..+++|++..
T Consensus 113 ~~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 113 DEALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 3444445555899998654 2234667788899998764
No 93
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=30.49 E-value=14 Score=28.33 Aligned_cols=19 Identities=47% Similarity=0.538 Sum_probs=14.8
Q ss_pred cCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 132 DDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 132 DDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
=|++.||+|+ +.+|.+++.
T Consensus 152 vDivsTG~TL-------raNgL~~ie 170 (206)
T 1ve4_A 152 VDVVQTGATL-------RAAGLVEVE 170 (206)
T ss_dssp EEEESSSHHH-------HHTTCEEEE
T ss_pred EEeccCHHHH-------HHCCCEEeE
Confidence 3899999997 467887764
No 94
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=30.11 E-value=75 Score=21.22 Aligned_cols=28 Identities=39% Similarity=0.440 Sum_probs=12.9
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
++-+||||||=-... ....+.|.+.|..
T Consensus 13 ~~~~iLivdd~~~~~---~~l~~~L~~~g~~ 40 (143)
T 3m6m_D 13 RSMRMLVADDHEANR---MVLQRLLEKAGHK 40 (143)
T ss_dssp --CEEEEECSSHHHH---HHHHHHHHC--CE
T ss_pred ccceEEEEeCCHHHH---HHHHHHHHHcCCe
Confidence 456788888754433 3333444445543
No 95
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=29.92 E-value=81 Score=24.68 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCC----CChhhHHHHHHHhCCCEEE
Q 029645 49 DTVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 90 (190)
Q Consensus 49 ~~~~~la~~i~~~~~d~Iv~i~~----gG~~~a~~la~~L~~p~~~ 90 (190)
..++.++..+++.++|+|+.-.. .|-.++..+|..|+.|++.
T Consensus 99 ~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 144 (264)
T 1o97_C 99 VVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (264)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 34455555554446898776653 2457899999999999864
No 96
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=29.78 E-value=88 Score=25.13 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~ 165 (190)
.+|+++||+ .+|++-++++..|.+.|++.+. ++++.
T Consensus 146 l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~---v~nRt 181 (312)
T 3t4e_A 146 MRGKTMVLL----GAGGAATAIGAQAAIEGIKEIK---LFNRK 181 (312)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEE---EEECS
T ss_pred cCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEE---EEECC
Confidence 478999985 6799999999999999987554 45664
No 97
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=29.28 E-value=89 Score=19.09 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
.+++.|+++.+ +|.....+...|++.|-+.+.
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~ 70 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVE 70 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEE
Confidence 36788888874 688888999999999976543
No 98
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=29.21 E-value=1.5e+02 Score=23.82 Aligned_cols=40 Identities=20% Similarity=0.090 Sum_probs=27.6
Q ss_pred HHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEEe
Q 029645 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (190)
Q Consensus 51 ~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~r 92 (190)
...+.+.+++.++|+|++-.. + ..+..+|..+++|++...
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEEe
Confidence 344555555568999987433 3 367788999999987653
No 99
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=28.74 E-value=12 Score=28.61 Aligned_cols=19 Identities=53% Similarity=0.711 Sum_probs=15.0
Q ss_pred cCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 132 DDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 132 DDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
=|++.||+|+ +.+|.+++.
T Consensus 154 vDivsTG~TL-------r~NgL~~ie 172 (208)
T 1z7m_E 154 VDIVETGNTL-------SANGLEVIE 172 (208)
T ss_dssp EEEESSSHHH-------HTTTCEEEE
T ss_pred EEEeCChHHH-------HHCCCEEeE
Confidence 3899999997 567887764
No 100
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=28.74 E-value=87 Score=24.39 Aligned_cols=41 Identities=7% Similarity=-0.139 Sum_probs=27.9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCC----CChhhHHHHHHHhCCCEEE
Q 029645 50 TVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 90 (190)
Q Consensus 50 ~~~~la~~i~~~~~d~Iv~i~~----gG~~~a~~la~~L~~p~~~ 90 (190)
.++.++..+++.++|+|+.-.. .|-.++..+|..|+.|++.
T Consensus 104 ~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 104 VARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCccc
Confidence 4444444444446898776553 2457899999999999864
No 101
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=28.22 E-value=84 Score=20.13 Aligned_cols=11 Identities=36% Similarity=0.730 Sum_probs=6.5
Q ss_pred CEEEEEcCccC
Q 029645 126 ERALVIDDLVA 136 (190)
Q Consensus 126 k~VLlVDDvvt 136 (190)
.+||||||=-.
T Consensus 4 ~~ilivdd~~~ 14 (127)
T 3i42_A 4 QQALIVEDYQA 14 (127)
T ss_dssp EEEEEECSCHH
T ss_pred ceEEEEcCCHH
Confidence 45677776433
No 102
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=28.12 E-value=1.2e+02 Score=19.23 Aligned_cols=28 Identities=29% Similarity=0.433 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga 153 (190)
.+++.|++.. .+|.....+...|++.|.
T Consensus 54 ~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 54 NDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp CTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 4678898886 788889999999999998
No 103
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=28.08 E-value=68 Score=22.20 Aligned_cols=31 Identities=32% Similarity=0.292 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
.+++.|+++++ +|.....+...|+..|-..+
T Consensus 54 ~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v 84 (141)
T 3ilm_A 54 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHV 84 (141)
T ss_dssp CTTSEEEEECS---SHHHHHHHHHHHHHTTCCSE
T ss_pred CCCCeEEEEEC---CChHHHHHHHHHHHcCCCCE
Confidence 46788888865 78888899999999997643
No 104
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=27.88 E-value=1.3e+02 Score=19.50 Aligned_cols=36 Identities=22% Similarity=0.488 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
+..|..|+=|++.-.++.|...+.++++..+...+.
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~ 98 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVH 98 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 568999999999999999999999999997655433
No 105
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=27.77 E-value=1e+02 Score=25.12 Aligned_cols=44 Identities=9% Similarity=-0.126 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhcCCCCEEEEeCCCChhhH-HHHHHHhCCCEEEE
Q 029645 48 KDTVDIFVDRYRDMGISVVAGIEARGFVFG-PSIALAIGAKFVPL 91 (190)
Q Consensus 48 ~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a-~~la~~L~~p~~~~ 91 (190)
......+...+.+.+||+|+........++ ...|..+++|++.+
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 444555556666668999999875555444 45667789998764
No 106
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=27.55 E-value=1e+02 Score=25.25 Aligned_cols=45 Identities=4% Similarity=-0.120 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEeCCCChhhH-HHHHHHhCCCEEEE
Q 029645 47 FKDTVDIFVDRYRDMGISVVAGIEARGFVFG-PSIALAIGAKFVPL 91 (190)
Q Consensus 47 ~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a-~~la~~L~~p~~~~ 91 (190)
.......+.+.+.+.+||+|+........++ ...|..+++|++.+
T Consensus 99 ~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 99 TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 3445555666666678999999876555553 56677889998654
No 107
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=27.49 E-value=1.1e+02 Score=19.10 Aligned_cols=32 Identities=9% Similarity=0.213 Sum_probs=29.3
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcCC
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga 153 (190)
+..|..|+=|++.-.+|.|...+.++|++.+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 56899999999999999999999999998874
No 108
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=27.32 E-value=70 Score=23.23 Aligned_cols=28 Identities=36% Similarity=0.510 Sum_probs=18.1
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga 153 (190)
.++.+||||||=-.. ...+...|++.|.
T Consensus 59 ~~~~~ILiVdDd~~~---~~~l~~~L~~~g~ 86 (206)
T 3mm4_A 59 LRGKRVLVVDDNFIS---RKVATGKLKKMGV 86 (206)
T ss_dssp TTTCEEEEECSCHHH---HHHHHHHHHHTTC
T ss_pred cCCCEEEEEeCCHHH---HHHHHHHHHHcCC
Confidence 467899999996544 3334445555665
No 109
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=27.20 E-value=84 Score=20.34 Aligned_cols=27 Identities=30% Similarity=0.373 Sum_probs=14.6
Q ss_pred CCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 125 GERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 125 gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
+.+||||||=-.... .....|++.|..
T Consensus 5 ~~~iLivdd~~~~~~---~l~~~L~~~g~~ 31 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRR---IIKNTLSRLGYE 31 (129)
T ss_dssp -CCEEEECSCHHHHH---HHHHHHHHTTCC
T ss_pred CcEEEEEeCCHHHHH---HHHHHHHHcCCc
Confidence 456888888544433 334445555653
No 110
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=26.55 E-value=1.2e+02 Score=18.83 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
+..|..|+=|++.-.+|.|...+.+++++.+..+
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v 73 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGKL 73 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 5689999999999999999999999999987643
No 111
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=26.45 E-value=52 Score=24.93 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=31.3
Q ss_pred ccCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccc--cCCCeEEE
Q 029645 134 LVATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRL--DGKPLYIL 181 (190)
Q Consensus 134 vvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l--~~~~~~sl 181 (190)
+-.+|+.+.++++.+++.+...--++++.++++..|.+.. .|+|++.+
T Consensus 14 ~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~ 63 (209)
T 4ds3_A 14 ISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVF 63 (209)
T ss_dssp ESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred EECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEe
Confidence 4567999999999997765433334556677654454333 38888764
No 112
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=25.99 E-value=85 Score=24.35 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=27.5
Q ss_pred HHHHHHHHhhcCCCCEEEEeCC----CChhhHHHHHHHhCCCEEE
Q 029645 50 TVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 90 (190)
Q Consensus 50 ~~~~la~~i~~~~~d~Iv~i~~----gG~~~a~~la~~L~~p~~~ 90 (190)
.++.++..+.+.++|+|+.-.. .|-.++..+|..|+.|++.
T Consensus 101 ~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 145 (252)
T 1efp_B 101 VAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQAT 145 (252)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 3444444444446888776653 2457899999999999864
No 113
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=25.73 E-value=93 Score=20.33 Aligned_cols=28 Identities=14% Similarity=0.204 Sum_probs=17.3
Q ss_pred CCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 125 GERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 125 gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
..+||||||=-.. .....+.|.+.|..+
T Consensus 6 ~~~ilivdd~~~~---~~~l~~~L~~~g~~v 33 (136)
T 3kto_A 6 HPIIYLVDHQKDA---RAALSKLLSPLDVTI 33 (136)
T ss_dssp -CEEEEECSCHHH---HHHHHHHHTTSSSEE
T ss_pred CCeEEEEcCCHHH---HHHHHHHHHHCCcEE
Confidence 4589999986544 344445566667654
No 114
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=25.70 E-value=90 Score=20.86 Aligned_cols=27 Identities=30% Similarity=0.206 Sum_probs=16.0
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMG 152 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G 152 (190)
.++.+||||||=-.. .......|.+.|
T Consensus 13 ~~~~~iLivdd~~~~---~~~l~~~L~~~~ 39 (152)
T 3eul_A 13 PEKVRVVVGDDHPLF---REGVVRALSLSG 39 (152)
T ss_dssp -CCEEEEEECSSHHH---HHHHHHHHHHHS
T ss_pred CceEEEEEEcCCHHH---HHHHHHHHhhCC
Confidence 367789999985443 333444455555
No 115
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=25.58 E-value=1.2e+02 Score=19.78 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
.+++.|+++ +.+|.....+...|++.|-+.+
T Consensus 54 ~~~~~ivv~---C~~G~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 54 NKNEIYYIV---CAGGVRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp CTTSEEEEE---CSSSSHHHHHHHHHHTTTCEEE
T ss_pred cCCCeEEEE---CCCCHHHHHHHHHHHHcCCCEE
Confidence 467788886 4688888889999999998653
No 116
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=25.28 E-value=89 Score=20.34 Aligned_cols=29 Identities=31% Similarity=0.397 Sum_probs=18.1
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
++.+||||||=-.....+ ...|...|..+
T Consensus 6 ~~~~ILivdd~~~~~~~l---~~~L~~~g~~v 34 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVT---KGLLVHLGCEV 34 (136)
T ss_dssp TTCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHHHHHH---HHHHHHcCCeE
Confidence 567899999976554444 34445556543
No 117
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=25.23 E-value=88 Score=20.39 Aligned_cols=30 Identities=23% Similarity=0.291 Sum_probs=19.2
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
..+.+||||||=-.....+ ...|...|..+
T Consensus 16 ~~~~~ilivdd~~~~~~~l---~~~L~~~g~~v 45 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEI---EKGLNVKGFMA 45 (137)
T ss_dssp TTCSEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CCCCeEEEEeCCHHHHHHH---HHHHHHcCcEE
Confidence 4678999999976554444 44445566543
No 118
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=25.12 E-value=92 Score=21.10 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEE
Q 029645 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (190)
Q Consensus 121 ~~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v 158 (190)
-+..|..|+=|++.-.++.|...+.++|+..+...+..
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 112 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTI 112 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEE
Confidence 35689999999999999999999999999987665443
No 119
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=25.07 E-value=52 Score=25.01 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=27.9
Q ss_pred chHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccc--cCCCeEEE
Q 029645 137 TGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRL--DGKPLYIL 181 (190)
Q Consensus 137 TG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l--~~~~~~sl 181 (190)
+|+.+.+.++..++.....--++++.++++..+.+.. .|+|++.+
T Consensus 12 ~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~ 58 (211)
T 3p9x_A 12 SGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCAL 58 (211)
T ss_dssp TCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEEC
T ss_pred CchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEe
Confidence 6899999999887654322224456677654333333 37887754
No 120
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=24.89 E-value=1.4e+02 Score=20.91 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=21.2
Q ss_pred CCC-EEEEeCC--CC---------hhhHHHHHHHhCCCEEEEe
Q 029645 62 GIS-VVAGIEA--RG---------FVFGPSIALAIGAKFVPLR 92 (190)
Q Consensus 62 ~~d-~Iv~i~~--gG---------~~~a~~la~~L~~p~~~~r 92 (190)
+++ +|||.|. .| -.++..|...+++|+.++-
T Consensus 53 ~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~D 95 (138)
T 1nu0_A 53 QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHD 95 (138)
T ss_dssp CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 444 7889873 22 3577888877889987753
No 121
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=24.64 E-value=1e+02 Score=20.02 Aligned_cols=29 Identities=7% Similarity=0.048 Sum_probs=18.8
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHcC-CeE
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERMG-AEV 155 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G-a~~ 155 (190)
...+||||||=-.. .....+.|++.| ..+
T Consensus 13 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~~v 42 (135)
T 3snk_A 13 KRKQVALFSSDPNF---KRDVATRLDALAIYDV 42 (135)
T ss_dssp CCEEEEEECSCHHH---HHHHHHHHHHTSSEEE
T ss_pred CCcEEEEEcCCHHH---HHHHHHHHhhcCCeEE
Confidence 45689999996554 444555666777 443
No 122
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=24.40 E-value=1e+02 Score=19.98 Aligned_cols=28 Identities=36% Similarity=0.476 Sum_probs=23.9
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga 153 (190)
.+++.|++.. .+|.....+...|++.|.
T Consensus 53 ~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp CTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 4677888887 688888899999999998
No 123
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=24.17 E-value=1.2e+02 Score=20.51 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHc
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERM 151 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~ 151 (190)
+..|..|+=||+.-.++.|...+.++|+..
T Consensus 74 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 74 LRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp SCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 568999999999999999999999999976
No 124
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=23.94 E-value=21 Score=28.70 Aligned_cols=19 Identities=37% Similarity=0.461 Sum_probs=14.1
Q ss_pred cCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 132 DDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 132 DDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
=|++.||+|++ .+|.+++.
T Consensus 159 vDivsTG~TLr-------aNgL~~ie 177 (289)
T 2vd3_A 159 TDLSSTGTTLR-------MNHLRVID 177 (289)
T ss_dssp EEEESSTHHHH-------HTTEEEEE
T ss_pred EEEeCChHHHH-------HCCCEEeE
Confidence 38999999975 56776653
No 125
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=23.80 E-value=72 Score=24.24 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=29.1
Q ss_pred CchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccc--cCCCeEEE
Q 029645 136 ATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRL--DGKPLYIL 181 (190)
Q Consensus 136 tTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l--~~~~~~sl 181 (190)
.+|+.+.++++.+++. ...--++++.++++..|.+.. .|+|++.+
T Consensus 14 G~Gsnl~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~ 60 (215)
T 3tqr_A 14 GNGTNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHII 60 (215)
T ss_dssp SCCHHHHHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHTTCCEEEC
T ss_pred CCcHHHHHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHcCCCEEEe
Confidence 5799999999998874 333234556667654443333 38888764
No 126
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=23.65 E-value=87 Score=20.72 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=13.8
Q ss_pred CCCEEEEEcCccCchHHHHHHHHHHHHc
Q 029645 124 PGERALVIDDLVATGGTLSAAVRLLERM 151 (190)
Q Consensus 124 ~gk~VLlVDDvvtTG~Tl~~~~~~L~~~ 151 (190)
++.+|||+||=-.. .......|++.
T Consensus 12 ~~~~vlivdd~~~~---~~~l~~~L~~~ 36 (145)
T 3kyj_B 12 SPYNVMIVDDAAMM---RLYIASFIKTL 36 (145)
T ss_dssp CSEEEEEECSCHHH---HHHHHHHHTTC
T ss_pred CCCeEEEEcCCHHH---HHHHHHHHHhC
Confidence 45678888875433 33334444444
No 127
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=23.56 E-value=21 Score=28.86 Aligned_cols=19 Identities=53% Similarity=0.604 Sum_probs=14.0
Q ss_pred cCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 132 DDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 132 DDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
=|++.||+||+ .+|.+++.
T Consensus 168 vDivsTG~TLr-------aNgL~~ie 186 (299)
T 1h3d_A 168 CDLVSTGATLE-------ANGLREVE 186 (299)
T ss_dssp EEEESSCHHHH-------HTTEEEEE
T ss_pred EecccCHHHHH-------HCCCEEeE
Confidence 38999999975 56766543
No 128
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=23.46 E-value=98 Score=23.57 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
.+|++|||| ..|......+..|.+.|+.++
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 589999986 779999999999999999864
No 129
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=23.22 E-value=2.4e+02 Score=21.81 Aligned_cols=41 Identities=17% Similarity=-0.009 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 51 ~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
...+...+++.++|+|++-.......+...+..+++|++..
T Consensus 85 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 85 WRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp HHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 34444555556899998864432344666777889998753
No 130
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=23.21 E-value=1.4e+02 Score=18.53 Aligned_cols=25 Identities=20% Similarity=0.307 Sum_probs=12.6
Q ss_pred EEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 127 RALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 127 ~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
+||||||=-.....+ ...|...|..
T Consensus 3 ~ilivdd~~~~~~~l---~~~l~~~~~~ 27 (120)
T 2a9o_A 3 KILIVDDEKPISDII---KFNMTKEGYE 27 (120)
T ss_dssp EEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred eEEEEcCCHHHHHHH---HHHHHhcCcE
Confidence 577777754433333 3334445544
No 131
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=22.74 E-value=1.5e+02 Score=19.27 Aligned_cols=9 Identities=56% Similarity=0.737 Sum_probs=5.5
Q ss_pred CEEEEEcCc
Q 029645 126 ERALVIDDL 134 (190)
Q Consensus 126 k~VLlVDDv 134 (190)
.+||||||=
T Consensus 4 ~~ilivdd~ 12 (143)
T 3jte_A 4 AKILVIDDE 12 (143)
T ss_dssp CEEEEECSC
T ss_pred CEEEEEcCC
Confidence 356677664
No 132
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=22.43 E-value=23 Score=28.72 Aligned_cols=18 Identities=33% Similarity=0.433 Sum_probs=14.2
Q ss_pred cCccCchHHHHHHHHHHHHcCCeEE
Q 029645 132 DDLVATGGTLSAAVRLLERMGAEVV 156 (190)
Q Consensus 132 DDvvtTG~Tl~~~~~~L~~~Ga~~i 156 (190)
=|++.||+||+ ++|.+++
T Consensus 173 vDiVsTG~TLr-------aNgL~~i 190 (304)
T 1nh8_A 173 ADVVGSGRTLS-------QHDLVAF 190 (304)
T ss_dssp EEEESSSHHHH-------HTTEEEE
T ss_pred EEEeCChHHHH-------HCcCEEc
Confidence 38999999974 5677776
No 133
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=22.10 E-value=1.3e+02 Score=23.76 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=29.2
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecCC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~ 166 (190)
.+|++++|+ .+|++-++++..|.+.|++.+. ++++..
T Consensus 120 ~~~k~vlvl----GaGGaaraia~~L~~~G~~~v~---v~nRt~ 156 (282)
T 3fbt_A 120 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIY---VVTRNP 156 (282)
T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEE---EEESCH
T ss_pred ccCCEEEEE----CCcHHHHHHHHHHHHcCCCEEE---EEeCCH
Confidence 579999975 6899999999999999986554 456643
No 134
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=21.91 E-value=1.6e+02 Score=19.95 Aligned_cols=37 Identities=19% Similarity=0.334 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcC-CeEEEE
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVEC 158 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G-a~~i~v 158 (190)
+..|..|+=|++.-.++.|...+.++|++.+ ...+.+
T Consensus 84 L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l 121 (131)
T 1wfg_A 84 LRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVEL 121 (131)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEE
Confidence 5689999999999999999999999999875 344443
No 135
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=21.85 E-value=1.1e+02 Score=24.00 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~ 157 (190)
.+|++|||| ..|.+....+..|.+.|++++-
T Consensus 11 l~~k~VLVV----GgG~va~rka~~Ll~~Ga~VtV 41 (274)
T 1kyq_A 11 LKDKRILLI----GGGEVGLTRLYKLMPTGCKLTL 41 (274)
T ss_dssp CTTCEEEEE----EESHHHHHHHHHHGGGTCEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHhCCCEEEE
Confidence 489999985 8899999999999999998643
No 136
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.71 E-value=1.5e+02 Score=18.68 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga 153 (190)
.+++.|+++. .+|.....+...|++.|.
T Consensus 54 ~~~~~iv~yC---~~g~rs~~a~~~L~~~G~ 81 (103)
T 3eme_A 54 NKNEIYYIVC---AGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp CTTSEEEEEC---SSSSHHHHHHHHHHTTTC
T ss_pred CCCCeEEEEC---CCChHHHHHHHHHHHCCC
Confidence 4678899887 578888889999999998
No 137
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.68 E-value=2e+02 Score=22.70 Aligned_cols=39 Identities=10% Similarity=-0.045 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 51 ~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
...+...+++.++|+|+.-. - ...+...|..+++|++..
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~-~-~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV-C-ALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET-T-CHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEeCc-c-hhHHHHHHHHhCCCEEEE
Confidence 33444555556899988853 2 233556778899998765
No 138
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=21.60 E-value=1.3e+02 Score=18.61 Aligned_cols=34 Identities=6% Similarity=0.204 Sum_probs=29.7
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
+..|..|+=||+.-.++.+...+.++|+..+..+
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4689999999999999999999999999877654
No 139
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=21.60 E-value=86 Score=20.21 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=23.9
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~ 155 (190)
.+++.|+++.+ +|.....+...|++.|.+.
T Consensus 56 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~ 85 (108)
T 1gmx_A 56 DFDTPVMVMCY---HGNSSKGAAQYLLQQGYDV 85 (108)
T ss_dssp CTTSCEEEECS---SSSHHHHHHHHHHHHTCSS
T ss_pred CCCCCEEEEcC---CCchHHHHHHHHHHcCCce
Confidence 36778888865 6778888899999999764
No 140
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=21.56 E-value=84 Score=24.27 Aligned_cols=48 Identities=19% Similarity=0.280 Sum_probs=36.1
Q ss_pred hcCHHHHHHHHHHHHHHhhcCCCCEEEEeCCCChhhHHHHHHHhCCCEEEE
Q 029645 41 LLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (190)
Q Consensus 41 ~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~a~~la~~L~~p~~~~ 91 (190)
+..-+-+..+++.|++++++...+ |.++|.+ ..+..+|..+|+|+..+
T Consensus 27 lGTGSTv~~~i~~L~~~~~~~~l~-i~~V~tS--~~t~~~a~~~Gi~l~~l 74 (228)
T 4gmk_A 27 LGTGSTVKYMVDALGKRVNEEGLD-IVGVTTS--IRTAEQAKSLGIVIKDI 74 (228)
T ss_dssp ECCSHHHHHHHHHHHHHHHHHCCC-CEEEESS--HHHHHHHHHTTCCBCCG
T ss_pred ECchHHHHHHHHHHHHHHhhcCCc-EEEEeCc--HHHHHHHHHcCCceeCh
Confidence 467778889999999888654444 5667765 56778899999997654
No 141
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=21.49 E-value=1.2e+02 Score=19.87 Aligned_cols=27 Identities=22% Similarity=0.210 Sum_probs=14.0
Q ss_pred CCEEEEEcCccCchHHHHHHHHHHHHcCCe
Q 029645 125 GERALVIDDLVATGGTLSAAVRLLERMGAE 154 (190)
Q Consensus 125 gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~ 154 (190)
..+||||||=-.... .....|++.|..
T Consensus 4 ~~~iLivdd~~~~~~---~l~~~L~~~g~~ 30 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAE---MLELVLRGAGYE 30 (136)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHTTCE
T ss_pred CCEEEEEeCCHHHHH---HHHHHHHHCCCE
Confidence 356778877544333 333344445543
No 142
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=21.11 E-value=1.4e+02 Score=21.04 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=21.6
Q ss_pred EEEEEcCccCchHHHHHHHHHHHHc
Q 029645 127 RALVIDDLVATGGTLSAAVRLLERM 151 (190)
Q Consensus 127 ~VLlVDDvvtTG~Tl~~~~~~L~~~ 151 (190)
.+.++||---+-.+++++++.|++.
T Consensus 36 g~~vi~DyaHnP~si~a~l~al~~~ 60 (163)
T 3mvn_A 36 NITVYDDFAHHPTAITATIDALRAK 60 (163)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4788899778999999999999973
No 143
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=20.83 E-value=1.7e+02 Score=22.83 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcCCeEEEEEEEeecC
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~ 165 (190)
.+|++++|+ .+|++-++++..|.+.|+..+. ++++.
T Consensus 118 l~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~---i~~R~ 153 (272)
T 3pwz_A 118 LRNRRVLLL----GAGGAVRGALLPFLQAGPSELV---IANRD 153 (272)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTCCSEEE---EECSC
T ss_pred ccCCEEEEE----CccHHHHHHHHHHHHcCCCEEE---EEeCC
Confidence 478999975 6799999999999999975443 45654
No 144
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.66 E-value=83 Score=20.82 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=20.6
Q ss_pred CCCCEEEEEcCccCchHHHHHHHHHHHHcC-CeEE
Q 029645 123 EPGERALVIDDLVATGGTLSAAVRLLERMG-AEVV 156 (190)
Q Consensus 123 ~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~G-a~~i 156 (190)
.++.+||||||=-.. .......|.+.| ..++
T Consensus 18 ~~~~~ilivdd~~~~---~~~l~~~L~~~g~~~v~ 49 (146)
T 4dad_A 18 QGMINILVASEDASR---LAHLARLVGDAGRYRVT 49 (146)
T ss_dssp GGGCEEEEECSCHHH---HHHHHHHHHHHCSCEEE
T ss_pred CCCCeEEEEeCCHHH---HHHHHHHHhhCCCeEEE
Confidence 367899999996655 444455566667 5543
No 145
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=20.63 E-value=1.2e+02 Score=19.03 Aligned_cols=12 Identities=17% Similarity=0.445 Sum_probs=6.9
Q ss_pred CEEEEEcCccCc
Q 029645 126 ERALVIDDLVAT 137 (190)
Q Consensus 126 k~VLlVDDvvtT 137 (190)
++||||||=-..
T Consensus 2 ~~ilivdd~~~~ 13 (124)
T 1mb3_A 2 KKVLIVEDNELN 13 (124)
T ss_dssp CEEEEECSCHHH
T ss_pred cEEEEEcCCHHH
Confidence 456666665444
No 146
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=20.39 E-value=1.3e+02 Score=24.69 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCCCCh-hhHHHHHHHhCCCEEEEec
Q 029645 49 DTVDIFVDRYRDMGISVVAGIEARGF-VFGPSIALAIGAKFVPLRK 93 (190)
Q Consensus 49 ~~~~~la~~i~~~~~d~Iv~i~~gG~-~~a~~la~~L~~p~~~~rk 93 (190)
..++..++.+++.++|+||++-.|.. ..|..+|...++|++.+-.
T Consensus 75 ~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~P~i~IPT 120 (364)
T 3iv7_A 75 EVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEcC
Confidence 33445555566668899999976653 5788889889999987643
No 147
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.36 E-value=95 Score=23.39 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=28.2
Q ss_pred CchHHHHHHHHHHHHcCCeEEEEEEEeecCCcccccccc--CCCeEEE
Q 029645 136 ATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRLD--GKPLYIL 181 (190)
Q Consensus 136 tTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l~--~~~~~sl 181 (190)
.||.-+..+++.+.+.+...--++++.+.....+.+... |+|++.+
T Consensus 10 G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~ 57 (216)
T 2ywr_A 10 GRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVI 57 (216)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEEC
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEe
Confidence 578888999999988765222234455654433433332 7887753
No 148
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.36 E-value=59 Score=24.72 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=29.2
Q ss_pred cCchHHHHHHHHHHHHcCCeEEEEEEEeecCCccccccc--cCCCeEEE
Q 029645 135 VATGGTLSAAVRLLERMGAEVVECACVVGLPEVRGQRRL--DGKPLYIL 181 (190)
Q Consensus 135 vtTG~Tl~~~~~~L~~~Ga~~i~v~vl~~~~~~~g~~~l--~~~~~~sl 181 (190)
-.+|+-+.++++.+++.+...--++++.++++..+.+.. .|+|++.+
T Consensus 16 SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~ 64 (215)
T 3kcq_A 16 SGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVV 64 (215)
T ss_dssp SSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred ECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEe
Confidence 567899999999887654333334456666654453333 38888754
No 149
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=20.33 E-value=1.6e+02 Score=18.15 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=29.0
Q ss_pred CCCCCEEEEEcCccCchHHHHHHHHHHHHcCC
Q 029645 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (190)
Q Consensus 122 ~~~gk~VLlVDDvvtTG~Tl~~~~~~L~~~Ga 153 (190)
+..|..|+=||..-.+|.|...+.++|++.+.
T Consensus 44 L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 44 LHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 56899999999999999999999999998764
No 150
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=20.02 E-value=1.7e+02 Score=18.13 Aligned_cols=13 Identities=38% Similarity=0.424 Sum_probs=7.4
Q ss_pred EEEEEcCccCchH
Q 029645 127 RALVIDDLVATGG 139 (190)
Q Consensus 127 ~VLlVDDvvtTG~ 139 (190)
+||||||=-....
T Consensus 3 ~ilivdd~~~~~~ 15 (116)
T 3a10_A 3 RILVVDDEPNIRE 15 (116)
T ss_dssp EEEEECSCHHHHH
T ss_pred EEEEEeCCHHHHH
Confidence 5677776544433
Done!