Query 029657
Match_columns 190
No_of_seqs 130 out of 1344
Neff 9.7
Searched_HMMs 29240
Date Tue Mar 26 18:26:28 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/029657.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2276-2280//hhsearch_pdb/029657hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lck_A Mitochondrial uncouplin 1.0 1 1 218.4 10.6 176 4-188 52-235 (303)
2 1okc_A ADP, ATP carrier protei 1.0 1 1 218.2 10.7 175 4-188 55-242 (297)
3 1okc_A ADP, ATP carrier protei 1.0 1 1 170.1 13.4 141 45-188 4-145 (297)
4 2lck_A Mitochondrial uncouplin 1.0 1 1 167.0 11.1 131 50-188 3-137 (303)
5 2acm_A Mucin-1; auto-catalytic 1.0 1 1 11.9 0.5 21 91-111 40-60 (66)
6 2lor_A Transmembrane protein 1 1.0 1 1 11.7 0.0 63 89-173 16-78 (108)
7 3vjj_A P9-1; 3.00A {Rice black 1.0 1 1 11.5 0.5 22 166-187 272-293 (368)
8 4b19_A PEPA1; toxin, toxin apo 1.0 1 1 10.6 -1.7 13 164-176 12-24 (30)
9 3i71_A Ethanolamine utilizatio 1.0 1 1 10.5 0.6 22 55-76 18-39 (68)
10 1y9i_A Low temperature require 1.0 1 1 10.1 3.7 49 122-172 111-159 (178)
No 1
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=1.00 E-value=1 Score=218.41 Aligned_cols=176 Identities=26% Similarity=0.353 Sum_probs=150.0
Q ss_pred CCHHHHEEECCCCEECCCCCCCCHHHHHHHHHHHHHHH-------CC-CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 30113401077220014566430323468799999752-------15-87785889999989989897720515799999
Q 029657 4 EARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQ-------NQ-SQIGTISQLLAGGVAGALSKTCTAPLARLTIL 75 (190)
Q Consensus 4 ~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~ag~~ag~~~~~i~~Pl~~ik~r 75 (190)
+|+++++++||++|||||+.+++++.++....++..++ .. ...+....+++|++||+++.++++|+|++|+|
T Consensus 52 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktr 131 (303)
T 2lck_A 52 GTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVR 131 (303)
T ss_dssp HHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999998628899986878999999999889998899999998537767767999999999999999992909999999
Q ss_pred HHHCCCCCCCCHHCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf 98527888720001301999999999742400012331555431013002258238999998842975433588873247
Q 029657 76 FQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDL 155 (190)
Q Consensus 76 ~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (190)
+|++... ....+|.+.++++++|+++||+++||||+.+++++.++..+++|.+||.+|+.+.+... ...+.
T Consensus 132 lq~~~~~--~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~-------~~~~~ 202 (303)
T 2lck_A 132 FQAQARA--GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL-------MTDDL 202 (303)
T ss_dssp HHHSCSC--CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-------CCSCH
T ss_pred HHCCCCC--CCCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CCCCH
T ss_conf 9626665--77777887999999999842844501776389999999998999999999999975468-------88765
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf 999999998888796642648899999851346
Q 029657 156 FVHFVSGGLAGITAASVTYPLDLVRTRLAAQVQ 188 (190)
Q Consensus 156 ~~~~~~g~~a~~~~~~~~~P~dviktr~q~~~~ 188 (190)
..++++|++||++++++++|+|+||+|||.+..
T Consensus 203 ~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~ 235 (303)
T 2lck_A 203 PCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL 235 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
T ss_conf 999999999999999873999999999986456
No 2
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=1.00 E-value=1 Score=218.20 Aligned_cols=175 Identities=21% Similarity=0.249 Sum_probs=147.0
Q ss_pred CCHHHHEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHC--------CC-CC----CHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 301134010772200145664303234687999997521--------58-77----858899999899898977205157
Q 029657 4 EARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQN--------QS-QI----GTISQLLAGGVAGALSKTCTAPLA 70 (190)
Q Consensus 4 ~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~~~~~~~--------~~-~~----~~~~~~~ag~~ag~~~~~i~~Pl~ 70 (190)
+|+++++++||++|||||+.+++++.++....++..++. .. .. .....+++|++||+++.++++|+|
T Consensus 55 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld 134 (297)
T 1okc_A 55 DCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLD 134 (297)
T ss_dssp HHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 99999986146120326667999999778899999999999996114576530378999999999999999999909499
Q ss_pred HHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999985278887200013019999999997424000123315554310130022582389999988429754335888
Q 029657 71 RLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGEN 150 (190)
Q Consensus 71 ~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (190)
++|+|+|++.... .....|++.++++++|+++||+++||||+.+++++.+|..+++|.+||.+++.+.+.
T Consensus 135 ~vktrlq~~~~~~-~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~--------- 204 (297)
T 1okc_A 135 FARTRLAADVGKG-AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--------- 204 (297)
T ss_dssp HHHHHHHHCCCSS-TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG---------
T ss_pred HHHHHHHCCCCCC-CCCCCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------
T ss_conf 9999983013578-867578989999999998413888407861888879999999999999999985467---------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf 73247999999998888796642648899999851346
Q 029657 151 MSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQVQ 188 (190)
Q Consensus 151 ~~~~~~~~~~~g~~a~~~~~~~~~P~dviktr~q~~~~ 188 (190)
...+....+++|+++|++++++++|+|+||+|||.+..
T Consensus 205 ~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~ 242 (297)
T 1okc_A 205 KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 242 (297)
T ss_dssp GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
T ss_conf 77538999999999999999965919999999941677
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=1.00 E-value=1 Score=170.12 Aligned_cols=141 Identities=36% Similarity=0.573 Sum_probs=117.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC-CCHHCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCC
Q ss_conf 7785889999989989897720515799999985278887-200013019999999997424000123315554310130
Q 029657 45 QIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPY 123 (190)
Q Consensus 45 ~~~~~~~~~ag~~ag~~~~~i~~Pl~~ik~r~q~~~~~~~-~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~ 123 (190)
..+....+++|++||+++.++++|+|++|+|+|++..... ....+|++.++++++|+++||+++||||+.+++++.++.
T Consensus 4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~ 83 (297)
T 1okc_A 4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT 83 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEECCCHHHHHHHHHH
T ss_conf 88999999999999999989658499999999706554555666563449999999986146120326667999999778
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf 02258238999998842975433588873247999999998888796642648899999851346
Q 029657 124 SSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQVQ 188 (190)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~dviktr~q~~~~ 188 (190)
.+++|.+||.+++.+..... ..+....+...++++|+++|++++++++|+|++|+|||.+..
T Consensus 84 ~~~~f~~ye~~k~~~~~~~~---~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~ 145 (297)
T 1okc_A 84 QALNFAFKDKYKQIFLGGVD---RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVG 145 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCC---TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 89999999999999611457---653037899999999999999999990949999999830135
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=1.00 E-value=1 Score=167.03 Aligned_cols=131 Identities=22% Similarity=0.402 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC----CCHHCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCHH
Q ss_conf 89999989989897720515799999985278887----20001301999999999742400012331555431013002
Q 029657 50 SQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD----TATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSS 125 (190)
Q Consensus 50 ~~~~ag~~ag~~~~~i~~Pl~~ik~r~q~~~~~~~----~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~ 125 (190)
..+++|++||+++.++++|+|++|+|+|++..... ....+|++.++++++|+++||+++||||+.+.+++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHH
T ss_conf 16996999999789990949999999996200245432356777888999999999862889998687899999999988
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf 258238999998842975433588873247999999998888796642648899999851346
Q 029657 126 VNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQVQ 188 (190)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~dviktr~q~~~~ 188 (190)
++|.+||.+|+.+.+.. + ..+...++++|+++|++++++++|+|++|+|||.+..
T Consensus 83 i~f~~ye~~k~~~~~~~------~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~ 137 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGS------E--HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR 137 (303)
T ss_dssp HTTTHHHHHHHHHSCCC------S--SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHCCC------C--CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99988999999985377------6--7767999999999999999992909999999962666
No 5
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=11.88 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHHHHCHHHCCC
Q ss_conf 019999999997424000123
Q 029657 91 ASIWREASRIISEEGFRAFWK 111 (190)
Q Consensus 91 ~~~~~~~~~i~~~~G~~~ly~ 111 (190)
++..+.+.+|++++++.||+.
T Consensus 40 r~is~L~lqIykq~~FLgl~~ 60 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLSN 60 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEE
T ss_conf 889999999981588313667
No 6
>2lor_A Transmembrane protein 141; helical bundle; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=11.74 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 13019999999997424000123315554310130022582389999988429754335888732479999999988887
Q 029657 89 RKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGIT 168 (190)
Q Consensus 89 ~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 168 (190)
+|+++-..+... -+.|++|+...+.+ .+..|++-..+++.+. .+..-+++.+.+++.+
T Consensus 16 KHPG~~~Y~~Cq-----S~Af~~Gl~tF~lG----~~~~f~~Q~~vqrklp-------------Yp~qwniLVs~v~~sv 73 (108)
T 2lor_A 16 KHPGLGEYAACQ-----SHAFMKGVFTFVTG----TGMAFGLQMFIQRKFP-------------YPLQWSLLVAVVAGSV 73 (108)
Q ss_pred HHHHH
Q ss_conf 96642
Q 029657 169 AASVT 173 (190)
Q Consensus 169 ~~~~~ 173 (190)
++.-+
T Consensus 74 aSY~V 78 (108)
T 2lor_A 74 VSYGV 78 (108)
No 7
>3vjj_A P9-1; 3.00A {Rice black streaked dwarf virus}
Probab=1.00 E-value=1 Score=11.48 Aligned_cols=22 Identities=32% Similarity=0.458 Sum_probs=15.8
Q ss_pred HHHHHHHHCCHHHHHHHHHHCC
Q ss_conf 8879664264889999985134
Q 029657 166 GITAASVTYPLDLVRTRLAAQV 187 (190)
Q Consensus 166 ~~~~~~~~~P~dviktr~q~~~ 187 (190)
=..+++-.+|||.+|-.++..-
T Consensus 272 yqLaTFdnypfdllRfqL~Sli 293 (368)
T 3vjj_A 272 YQLATFDNYPFDLLRFQLSSLI 293 (368)
T ss_dssp HHHHHCTTCBHHHHHHHCSSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 3430277887899998755432
No 8
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=1.00 E-value=1 Score=10.65 Aligned_cols=13 Identities=31% Similarity=0.442 Sum_probs=4.5
Q ss_pred HHHHHHHHHHCCH
Q ss_conf 8888796642648
Q 029657 164 LAGITAASVTYPL 176 (190)
Q Consensus 164 ~a~~~~~~~~~P~ 176 (190)
++|.+-++++|-+
T Consensus 12 isGcivalF~hWL 24 (30)
T 4b19_A 12 ISGCAIAFFSYWL 24 (30)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998
No 9
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=1.00 E-value=1 Score=10.48 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 9899898977205157999999
Q 029657 55 GGVAGALSKTCTAPLARLTILF 76 (190)
Q Consensus 55 g~~ag~~~~~i~~Pl~~ik~r~ 76 (190)
|+++|-++.-..-|++..+..+
T Consensus 18 GMTaGEVAA~f~w~Le~ar~aL 39 (68)
T 3i71_A 18 GMTAGEVAAHFGWPLEKARNAL 39 (68)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHH
T ss_conf 3509999999678499999999
No 10
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=1.00 E-value=1 Score=10.13 Aligned_cols=49 Identities=10% Similarity=-0.053 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 300225823899999884297543358887324799999999888879664
Q 029657 122 PYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASV 172 (190)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 172 (190)
....+.|..||..|-...+..... .....-..+.+.++|..|+++..++
T Consensus 111 ~~gf~~Fr~fDi~KPgpI~~ld~~--~~gg~gimlDDivAgi~A~~~~~l~ 159 (178)
T 1y9i_A 111 SIGFTNYGYIDKVKPGILAKLNEH--DGIAVHTFLDDIVGAIAAAAASRLA 159 (178)
T ss_dssp GGGHHHHHHHHHHCCTHHHHTTCC--CSSCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCC--CCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999989883253547766101--5898743098899999999999999
Done!