Your job contains 1 sequence.
>029660
MSSCGIDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSL
SWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPS
AYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQPKLDDASGNR
LMSRTALRNK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029660
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066311 - symbol:YAB5 "YABBY5" species:3702 "A... 642 6.9e-63 1
TAIR|locus:2826731 - symbol:YAB2 "YABBY2" species:3702 "A... 464 5.0e-44 1
TAIR|locus:2005492 - symbol:AFO "AT2G45190" species:3702 ... 414 9.9e-39 1
UNIPROTKB|Q7XIM7 - symbol:YAB1 "Protein YABBY 1" species:... 389 4.4e-36 1
TAIR|locus:2028020 - symbol:INO "INNER NO OUTER" species:... 346 1.6e-31 1
UNIPROTKB|Q76EJ0 - symbol:DL "Protein DROOPING LEAF" spec... 328 1.3e-29 1
TAIR|locus:2026418 - symbol:CRC "AT1G69180" species:3702 ... 306 2.8e-27 1
TAIR|locus:2126931 - symbol:YAB3 "YABBY3" species:3702 "A... 296 3.2e-26 1
>TAIR|locus:2066311 [details] [associations]
symbol:YAB5 "YABBY5" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR009071 Pfam:PF04690
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10 SUPFAM:SSF47095
EMBL:AC002505 HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AK119091
EMBL:BT003734 IPI:IPI00528245 PIR:T00991 RefSeq:NP_850080.1
RefSeq:NP_850081.1 UniGene:At.38874 ProteinModelPortal:Q8GW46
SMR:Q8GW46 STRING:Q8GW46 EnsemblPlants:AT2G26580.1
EnsemblPlants:AT2G26580.2 GeneID:817199 KEGG:ath:AT2G26580
GeneFarm:5115 TAIR:At2g26580 eggNOG:NOG246832 InParanoid:Q8GW46
OMA:TRTITEQ PhylomeDB:Q8GW46 ProtClustDB:CLSN2690930
Genevestigator:Q8GW46 GermOnline:AT2G26580 Uniprot:Q8GW46
Length = 164
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 126/166 (75%), Positives = 139/166 (83%)
Query: 8 VAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHH 67
+A EQLCYIPCNFCNI+LAV+VPCSSL DIVTVRCGHC+NLWSVNMAAA QSLS +
Sbjct: 6 MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNF-- 63
Query: 68 HQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIK 127
QA +YA PE GSSS+ + KI + R T TE+R+VNRPPEKRQRVPSAYNQFIK
Sbjct: 64 -QATNYAVPE----YGSSSRSHTKIPS-RISTRTITEQRIVNRPPEKRQRVPSAYNQFIK 117
Query: 128 EEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQPKL 173
EEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE+N Q K+
Sbjct: 118 EEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163
>TAIR|locus:2826731 [details] [associations]
symbol:YAB2 "YABBY2" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0010158 "abaxial cell fate
specification" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF04690 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 SUPFAM:SSF47095 EMBL:AC006932 GO:GO:0010158
HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AF136539
IPI:IPI00531086 RefSeq:NP_001077490.1 UniGene:At.11866
ProteinModelPortal:Q9XFB0 SMR:Q9XFB0 EnsemblPlants:AT1G08465.1
GeneID:3766682 KEGG:ath:AT1G08465 GeneFarm:5112 TAIR:At1g08465
eggNOG:NOG328989 OMA:FCTTILA PhylomeDB:Q9XFB0
ProtClustDB:CLSN2699038 Genevestigator:Q9XFB0 Uniprot:Q9XFB0
Length = 184
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 95/175 (54%), Positives = 117/175 (66%)
Query: 6 IDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDV 65
+D + E++CY+ C+FC +LAVSVP +SL +VTVRCGHC+NL S+N+ + S +
Sbjct: 3 VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62
Query: 66 HHHQAPSY---ASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAY 122
H P S R D SSS+ N +S +A + RPPEKRQRVPSAY
Sbjct: 63 HQDLQPHRQHTTSLVTRKDCASSSRSTNNLS--ENIDREAPRMPPI-RPPEKRQRVPSAY 119
Query: 123 NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQPKLDDAS 177
N+FIKEEIQRIKA NP+ISHREAFSTAAKNWAHFPHIHFGL L+ N + K D S
Sbjct: 120 NRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174
>TAIR|locus:2005492 [details] [associations]
symbol:AFO "AT2G45190" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;TAS] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=ISS] [GO:0009909 "regulation of
flower development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010154 "fruit development" evidence=IMP]
[GO:0010158 "abaxial cell fate specification" evidence=IGI]
[GO:0010159 "specification of organ position" evidence=IMP]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0010450 "inflorescence meristem growth" evidence=IMP]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0045165 "cell fate commitment" evidence=IMP] InterPro:IPR009071
Pfam:PF04690 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10
SUPFAM:SSF47095 GO:GO:0010154 GO:GO:0010093 GO:GO:0009909
EMBL:AC002387 GO:GO:0009933 GO:GO:0010158 GO:GO:0010159
GO:GO:0010450 HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AF136538
EMBL:AF074948 EMBL:AF087015 IPI:IPI00516811 PIR:T51587
RefSeq:NP_566037.1 UniGene:At.10852 ProteinModelPortal:O22152
IntAct:O22152 STRING:O22152 EnsemblPlants:AT2G45190.1 GeneID:819127
KEGG:ath:AT2G45190 GeneFarm:5111 TAIR:At2g45190 eggNOG:NOG239732
InParanoid:O22152 OMA:KDGFFAP PhylomeDB:O22152
ProtClustDB:CLSN2917332 Genevestigator:O22152 GermOnline:AT2G45190
Uniprot:O22152
Length = 229
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 96/185 (51%), Positives = 117/185 (63%)
Query: 4 CGID-VAP-EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLS 61
C D +P + LCY+ CNFC +LAV+VP +SL VTVRCG C+NL SVNM + S
Sbjct: 14 CSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPAS 73
Query: 62 WQDVHHHQAP-SYASPECRIDLGSSSKCNNKISAMRT-PT-------------NKATEER 106
Q + P SY +P+ ++ + N + M PT ++ +
Sbjct: 74 NQ-LQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAP 132
Query: 107 VVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE 166
VNRPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGL+
Sbjct: 133 PVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLV-- 190
Query: 167 ANNQP 171
+NQP
Sbjct: 191 PDNQP 195
>UNIPROTKB|Q7XIM7 [details] [associations]
symbol:YAB1 "Protein YABBY 1" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IDA] [GO:0048833
"specification of floral organ number" evidence=IMP]
InterPro:IPR009071 Pfam:PF04690 GO:GO:0005634 GO:GO:0030154
GO:GO:0046872 GO:GO:0003677 Gene3D:1.10.30.10 SUPFAM:SSF47095
EMBL:AP008213 GO:GO:0048833 HOGENOM:HOG000239859 InterPro:IPR006780
EMBL:AF098752 EMBL:AB274013 EMBL:AP003847 PIR:T51586
RefSeq:NP_001058937.1 UniGene:Os.74707 STRING:Q7XIM7
EnsemblPlants:LOC_Os07g06620.1 GeneID:4342449 KEGG:osa:4342449
Gramene:Q7XIM7 eggNOG:NOG310834 ProtClustDB:CLSN2696557
Uniprot:Q7XIM7
Length = 169
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 78/159 (49%), Positives = 103/159 (64%)
Query: 6 IDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDV 65
+ E +CY+ CN+CN +L V+VP + +IVTVRCGHC+ + S+++A Q+ + QD
Sbjct: 3 VQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQD- 61
Query: 66 HHHQAPSYASPEC-RIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQ 124
H Q + D+ S N + S P + ++ RPPEKRQRVPSAYN+
Sbjct: 62 HQVQNRGFQGNNFGSYDIASR---NQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNR 118
Query: 125 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 163
FIKEEIQRIK +NP+ISHREAFS AAKNWAH P +HFGL
Sbjct: 119 FIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGL 157
>TAIR|locus:2028020 [details] [associations]
symbol:INO "INNER NO OUTER" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IDA] [GO:0048481 "ovule development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR009071 Pfam:PF04690 EMBL:CP002684 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10
SUPFAM:SSF47095 GO:GO:0048481 EMBL:AC007945 GO:GO:0009944
EMBL:AC005292 InterPro:IPR006780 EMBL:AF195047 IPI:IPI00520101
RefSeq:NP_564194.1 UniGene:At.11885 IntAct:Q9LDT3 STRING:Q9LDT3
EnsemblPlants:AT1G23420.1 GeneID:838950 KEGG:ath:AT1G23420
GeneFarm:5114 TAIR:At1g23420 eggNOG:NOG271352 InParanoid:Q9LDT3
OMA:APSAYNC PhylomeDB:Q9LDT3 ProtClustDB:CLSN2687926
Genevestigator:Q9LDT3 Uniprot:Q9LDT3
Length = 231
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 77/163 (47%), Positives = 102/163 (62%)
Query: 10 PEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVN-MAAAF------QSLSW 62
P Q+C++ C FC +L VSVP +SL +VTVRCGHC++L SVN M A+F SLS
Sbjct: 18 PGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSH 77
Query: 63 QD-VHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEE----RVVNRPPEKRQR 117
D + + E + K N+ + + + N+ + +VVN+PPEKRQR
Sbjct: 78 LDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQR 137
Query: 118 VPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 160
PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHFP H
Sbjct: 138 APSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180
>UNIPROTKB|Q76EJ0 [details] [associations]
symbol:DL "Protein DROOPING LEAF" species:39947 "Oryza
sativa Japonica Group" [GO:0010022 "meristem determinacy"
evidence=IGI;IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048440 "carpel development" evidence=IMP] InterPro:IPR009071
Pfam:PF04690 GO:GO:0005634 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:DP000009 EMBL:AP008209 Gene3D:1.10.30.10
SUPFAM:SSF47095 GO:GO:0048440 GO:GO:0048366 EMBL:CM000140
eggNOG:NOG250468 HOGENOM:HOG000239859 ProtClustDB:CLSN2682517
InterPro:IPR006780 GO:GO:0010022 EMBL:AB106553 EMBL:AB106554
EMBL:AY494713 RefSeq:NP_001049375.1 UniGene:Os.49773 STRING:Q76EJ0
EnsemblPlants:LOC_Os03g11600.2 GeneID:4332058
KEGG:dosa:Os03t0215200-00 KEGG:osa:4332058 Gramene:Q76EJ0
Uniprot:Q76EJ0
Length = 194
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 75/153 (49%), Positives = 95/153 (62%)
Query: 8 VAP-EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAF-QSLSWQDV 65
V+P E LCY+ C +CN VLAV VPC L+D VTV+CGHC+NL ++ Q LS D
Sbjct: 4 VSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSPTD- 62
Query: 66 HHHQAPSYASP--ECRIDLGSSSKCNNKISAMRTPTNKATEERV--VNRPPEKRQRVPSA 121
H P + P +CR N+ + +PT+ R V +PPEK+ R+PSA
Sbjct: 63 -HPLGP-FQGPCTDCR---------RNQPLPLVSPTSNEGSPRAPFVVKPPEKKHRLPSA 111
Query: 122 YNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 154
YN+F++EEIQRIKA PDI HREAFS AAKNWA
Sbjct: 112 YNRFMREEIQRIKAAKPDIPHREAFSMAAKNWA 144
>TAIR|locus:2026418 [details] [associations]
symbol:CRC "AT1G69180" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0010254 "nectary development" evidence=IMP]
[GO:0048440 "carpel development" evidence=RCA;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=TAS] [GO:0010582 "floral meristem determinacy"
evidence=IGI] [GO:0048479 "style development" evidence=IMP]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010093
"specification of floral organ identity" evidence=RCA] [GO:0031540
"regulation of anthocyanin biosynthetic process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR009071 Pfam:PF04690 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SUPFAM:SSF47095 EMBL:AC008262 EMBL:AC018364 GO:GO:0010582
GO:GO:0009944 EMBL:AF132606 EMBL:BT008618 EMBL:AY088672
IPI:IPI00547204 PIR:G96715 RefSeq:NP_177078.1 UniGene:At.11478
ProteinModelPortal:Q8L925 SMR:Q8L925 STRING:Q8L925
EnsemblPlants:AT1G69180.1 GeneID:843249 KEGG:ath:AT1G69180
GeneFarm:5110 TAIR:At1g69180 eggNOG:NOG250468 HOGENOM:HOG000239859
InParanoid:Q8L925 OMA:CNTVLAL PhylomeDB:Q8L925
ProtClustDB:CLSN2682517 Genevestigator:Q8L925 GO:GO:0010254
GO:GO:0048479 InterPro:IPR006780 Uniprot:Q8L925
Length = 181
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 64/146 (43%), Positives = 90/146 (61%)
Query: 11 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQA 70
E L Y+ C+ CN +LAV +P +LD VTV+CGHC NL + Q + Q
Sbjct: 19 EHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTTTPPLQGHVSLTL---QM 75
Query: 71 PSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEI 130
S+ + + GSSS ++ S+ + P+ V +PPEK+QR+PSAYN+F+++EI
Sbjct: 76 QSFGGSDYK--KGSSSSSSSSTSSDQPPSPSPP---FVVKPPEKKQRLPSAYNRFMRDEI 130
Query: 131 QRIKANNPDISHREAFSTAAKNWAHF 156
QRIK+ NP+I HREAFS AAKNWA +
Sbjct: 131 QRIKSANPEIPHREAFSAAAKNWAKY 156
>TAIR|locus:2126931 [details] [associations]
symbol:YAB3 "YABBY3" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] InterPro:IPR009071
Pfam:PF04690 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10
SUPFAM:SSF47095 GO:GO:0010154 EMBL:AL161471 GO:GO:0010158
HOGENOM:HOG000239859 InterPro:IPR006780 EMBL:AF069299 EMBL:AF136540
EMBL:AY037186 EMBL:BT002662 IPI:IPI00528237 PIR:T01346
RefSeq:NP_567154.1 UniGene:At.11867 IntAct:Q9XFB1 STRING:Q9XFB1
PRIDE:Q9XFB1 EnsemblPlants:AT4G00180.1 GeneID:827914
KEGG:ath:AT4G00180 GeneFarm:5113 TAIR:At4g00180 eggNOG:NOG305997
InParanoid:Q9XFB1 OMA:GGQNINM PhylomeDB:Q9XFB1
ProtClustDB:CLSN2689244 Genevestigator:Q9XFB1 GermOnline:AT4G00180
Uniprot:Q9XFB1
Length = 240
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 74/174 (42%), Positives = 95/174 (54%)
Query: 6 IDVAPEQL---CYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHC----------SNLWSVN 52
+ V P L + C C+ +L+V+V +LL GH NL
Sbjct: 39 VSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLE-E 97
Query: 53 MAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPP 112
M + Q+++ + H A ++ E + + + + + M P NRPP
Sbjct: 98 MRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPP-------ANRPP 150
Query: 113 EKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE 166
EKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM +
Sbjct: 151 EKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMAD 204
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 11 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMA 54
+QLCY+ C+FC+ VLAVSVP SSL VTVRCGHCSNL SV ++
Sbjct: 23 DQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVS 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.129 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 11 22 0.43 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 612 (65 KB)
Total size of DFA: 190 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.72u 0.09s 20.81t Elapsed: 00:00:01
Total cpu time: 20.73u 0.09s 20.82t Elapsed: 00:00:01
Start: Sat May 11 06:19:44 2013 End: Sat May 11 06:19:45 2013