BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029665
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46287|RL11_MEDSA 60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1
Length = 181
Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/179 (97%), Positives = 178/179 (99%)
Query: 10 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 69
AS+KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI
Sbjct: 2 ASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 61
Query: 70 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 129
RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
Query: 130 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 188
TGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 TGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180
>sp|P42795|RL111_ARATH 60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=1
SV=2
Length = 182
Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/179 (95%), Positives = 178/179 (99%)
Query: 10 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 69
AS+KKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGI
Sbjct: 2 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61
Query: 70 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 129
RRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
Query: 130 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 188
TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>sp|P42794|RL112_ARATH 60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2
SV=2
Length = 182
Score = 357 bits (915), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 171/179 (95%), Positives = 178/179 (99%)
Query: 10 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 69
AS+KKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGI
Sbjct: 2 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61
Query: 70 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 129
RRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
Query: 130 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 188
TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>sp|Q0DK10|RL11_ORYSJ 60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11
PE=2 SV=1
Length = 182
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 167/177 (94%), Positives = 174/177 (98%)
Query: 10 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 69
AS+KK SNPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2 ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGI 61
Query: 70 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 129
RRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121
Query: 130 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 186
TGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 122 TGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178
>sp|A2YDY2|RL11_ORYSI 60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11
PE=2 SV=2
Length = 182
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 167/177 (94%), Positives = 174/177 (98%)
Query: 10 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 69
AS+KK SNPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2 ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGI 61
Query: 70 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 129
RRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121
Query: 130 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 186
TGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 122 TGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178
>sp|Q10157|RL11_SCHPO 60S ribosomal protein L11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl11a PE=1 SV=1
Length = 174
Score = 269 bits (687), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 13 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRN 72
+K NPM+E+++ KLVLNIS+GESGDRLTRAAKVLEQLSGQTPVFSKARYT+R FGIRRN
Sbjct: 3 EKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRN 62
Query: 73 EKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI 132
EKIAC+VTVRG KA ++LE GLKVKEYEL +RNFS TG FGFGIQEHIDLGIKYDPS GI
Sbjct: 63 EKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGI 122
Query: 133 YGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK 184
YGMDF+VV++RPG RV RR+ + RVG H++ ED + WF+ KY+ V+L K
Sbjct: 123 YGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
>sp|P46222|RL11_DROME 60S ribosomal protein L11 OS=Drosophila melanogaster GN=RpL11 PE=1
SV=2
Length = 184
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/167 (76%), Positives = 143/167 (85%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPMR++ ++KL LNI VGESGDRLTRAAKVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 15 NPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 74
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 136
+ TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 75 VHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLD 134
Query: 137 FFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN 183
F+VVL RPGY V R+R VG QHR+TKEDAMKWFQ KY+G+ILN
Sbjct: 135 FYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
>sp|Q7RVN0|RL11_NEUCR 60S ribosomal protein L11 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-11
PE=3 SV=2
Length = 174
Score = 266 bits (680), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 149/172 (86%)
Query: 10 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 69
++++K NPMRE+++QKLVLNI VGESGDRLTRAAKVLEQLSGQTPV+SKARYTVR+FGI
Sbjct: 2 STEQKAQNPMRELRIQKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGI 61
Query: 70 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 129
RRNEKI+ +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP
Sbjct: 62 RRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPG 121
Query: 130 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 181
GIYGMDF+ + RPG RV RRRR KSRVG HR+T++D +KWF+ +++ ++
Sbjct: 122 IGIYGMDFYCCMTRPGERVSRRRRAKSRVGATHRITRDDTVKWFKSRFDAIV 173
>sp|Q758S7|RL11_ASHGO 60S ribosomal protein L11 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL11 PE=3 SV=1
Length = 174
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/171 (71%), Positives = 148/171 (86%)
Query: 14 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 73
K NPMRE+K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 4 KAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVHSKARYTVRTFGIRRNE 63
Query: 74 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 133
KIA +VT+RG K+ ++LE GLKVKEY+L +NFS+TG FGFGIQEHIDLGIKYDPS GIY
Sbjct: 64 KIAVHVTIRGPKSEEILERGLKVKEYQLRTKNFSETGNFGFGIQEHIDLGIKYDPSIGIY 123
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK 184
GMDF+VV+ RPG RV RR+RC+S VG H+ +KED + WF+ +Y+ +L+K
Sbjct: 124 GMDFYVVMGRPGGRVSRRKRCRSTVGNSHKTSKEDTIAWFKQRYDADVLDK 174
>sp|P0C0W9|RL11A_YEAST 60S ribosomal protein L11-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL11A PE=1 SV=2
Length = 174
Score = 264 bits (674), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 145/171 (84%)
Query: 14 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 73
K NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 74 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 133
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIF 123
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK 184
GMDF+VV+ RPG RV RR+RCK VG H+ TKED + WF+ KY+ +L+K
Sbjct: 124 GMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
>sp|Q3E757|RL11B_YEAST 60S ribosomal protein L11-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL11B PE=1 SV=3
Length = 174
Score = 264 bits (674), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 145/171 (84%)
Query: 14 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 73
K NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 74 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 133
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIF 123
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK 184
GMDF+VV+ RPG RV RR+RCK VG H+ TKED + WF+ KY+ +L+K
Sbjct: 124 GMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
>sp|Q94300|RL11_CAEEL 60S ribosomal protein L11 OS=Caenorhabditis elegans GN=rpl-11.1
PE=3 SV=1
Length = 196
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/171 (74%), Positives = 144/171 (84%)
Query: 12 DKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 71
+KK N MRE+K+QKL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRR
Sbjct: 12 EKKGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRR 71
Query: 72 NEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTG 131
NEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FGFG+QEHIDLGIKYDP G
Sbjct: 72 NEKIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIG 131
Query: 132 IYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
IYGMDF+VVL R G RV +RRR R+G HRV KE+ +KWFQ KY+G+IL
Sbjct: 132 IYGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEETIKWFQQKYDGIIL 182
>sp|Q90YV7|RL11_ICTPU 60S ribosomal protein L11 OS=Ictalurus punctatus GN=rpl11 PE=2 SV=3
Length = 178
Score = 261 bits (668), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/177 (70%), Positives = 150/177 (84%), Gaps = 2/177 (1%)
Query: 6 MVNQASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVR 65
M +Q K+ NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVR
Sbjct: 1 MADQGEKKE--NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 58
Query: 66 SFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 125
SFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSD+G FGFGIQEHIDLGIK
Sbjct: 59 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDSGNFGFGIQEHIDLGIK 118
Query: 126 YDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
YDPS GIYG+DF+VVL RPG+ + ++R + R+G +HR+ K +AM+WFQ KY+GVIL
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIADKKRKRGRIGFKHRIRKREAMRWFQQKYDGVIL 175
>sp|P62914|RL11_RAT 60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2
Length = 178
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 145/167 (86%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGM 135
A + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
DF+VVL RPG+ + ++R +G +HR++KE+AM+WFQ KY+G+IL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>sp|Q9CXW4|RL11_MOUSE 60S ribosomal protein L11 OS=Mus musculus GN=Rpl11 PE=1 SV=4
Length = 178
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 145/167 (86%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGM 135
A + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
DF+VVL RPG+ + ++R +G +HR++KE+AM+WFQ KY+G+IL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>sp|P62913|RL11_HUMAN 60S ribosomal protein L11 OS=Homo sapiens GN=RPL11 PE=1 SV=2
Length = 178
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 145/167 (86%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGM 135
A + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
DF+VVL RPG+ + ++R +G +HR++KE+AM+WFQ KY+G+IL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>sp|Q6QMZ8|RL11_CHILA 60S ribosomal protein L11 OS=Chinchilla lanigera GN=RPL11 PE=2 SV=3
Length = 178
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 145/167 (86%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGM 135
A + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
DF+VVL RPG+ + ++R +G +HR++KE+AM+WFQ KY+G+IL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>sp|Q3T087|RL11_BOVIN 60S ribosomal protein L11 OS=Bos taurus GN=RPL11 PE=2 SV=3
Length = 178
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 145/167 (86%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGM 135
A + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
DF+VVL RPG+ + ++R +G +HR++KE+AM+WFQ KY+G+IL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>sp|Q6FTK4|RL11_CANGA 60S ribosomal protein L11 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL11
PE=3 SV=1
Length = 174
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/171 (70%), Positives = 146/171 (85%)
Query: 14 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 73
K N MRE+K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 4 KTQNVMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 74 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 133
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDPS GI+
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSTTGNFGFGIQEHIDLGIKYDPSIGIF 123
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK 184
GMDF++V+ RPG R+ RR+RC++ VG H+ +KED + WF+ +Y+ +L+K
Sbjct: 124 GMDFYIVMGRPGNRIARRKRCRATVGNSHKTSKEDTIAWFKQRYDADVLDK 174
>sp|Q5RC11|RL11_PONAB 60S ribosomal protein L11 OS=Pongo abelii GN=RPL11 PE=2 SV=3
Length = 178
Score = 259 bits (661), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 145/167 (86%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGM 135
A + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
DF+VVL RPG+ + ++R +G +HR++KE+AM+WFQ KY+G+IL
Sbjct: 129 DFYVVLGRPGFSITDKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>sp|Q29205|RL11_PIG 60S ribosomal protein L11 OS=Sus scrofa GN=RPL11 PE=2 SV=3
Length = 178
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 145/166 (87%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 136
+ TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 129
Query: 137 FFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
F+VVL RPG+ + ++R +G +HR++KE+AM+WFQ K++G+IL
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKHDGIIL 175
>sp|P16168|RL11_DICDI 60S ribosomal protein L11 OS=Dictyostelium discoideum GN=rpl11 PE=1
SV=2
Length = 202
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/169 (69%), Positives = 143/169 (84%)
Query: 14 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 73
K N MR ++++KLVLNI VGESGDRL RAAKVLEQL+GQTPV+SKARYTVRSF IRRNE
Sbjct: 30 KKDNVMRGLRIEKLVLNICVGESGDRLVRAAKVLEQLTGQTPVYSKARYTVRSFNIRRNE 89
Query: 74 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 133
+IA +VTVRG+KA ++LE GLKV+E+EL RNFS G FGFGIQEHIDLGIKYDPS GIY
Sbjct: 90 QIAAHVTVRGEKAAEILEKGLKVREFELRARNFSTQGSFGFGIQEHIDLGIKYDPSIGIY 149
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
GMDFFVVL RPG+RV ++R ++VG QH++ KEDA+ WF+ Y+G+++
Sbjct: 150 GMDFFVVLSRPGFRVAHKKRAGAKVGFQHKIGKEDAVNWFKTTYDGIVI 198
>sp|P42922|RL11_LEICH 60S ribosomal protein L11 OS=Leishmania chagasi GN=RPL11 PE=2 SV=1
Length = 188
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 140/173 (80%)
Query: 11 SDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIR 70
++ K +NPMREI V+KL +NI VGESGDRLTRA+KVLEQL QTPV S+AR TVR+FGIR
Sbjct: 3 AESKAANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRARLTVRTFGIR 62
Query: 71 RNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPST 130
RNEKIA + TVRG KA +LLE GLKVKE+EL NFSDTG FGFGI EHIDLGIKYDPST
Sbjct: 63 RNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFSDTGSFGFGIDEHIDLGIKYDPST 122
Query: 131 GIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN 183
GIYGMDF+VVL R G RV R+R SRVG H VTKE+AMKWF+ ++G+I
Sbjct: 123 GIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGIIFQ 175
>sp|P48157|RL11_LEIMA 60S ribosomal protein L11 OS=Leishmania major GN=RPL11 PE=3 SV=1
Length = 188
Score = 247 bits (631), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/173 (69%), Positives = 140/173 (80%)
Query: 11 SDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIR 70
++ K +NPMREI V+KL +NI VGESGDRLTRA+KVLEQL QTPV S+AR TVR+FGIR
Sbjct: 3 AESKAANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRARLTVRTFGIR 62
Query: 71 RNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPST 130
RNEKIA + TVRG KA +LLE GLKVKE+EL NF+DTG FGFGI EHIDLGIKYDPST
Sbjct: 63 RNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFADTGSFGFGIDEHIDLGIKYDPST 122
Query: 131 GIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILN 183
GIYGMDF+VVL R G RV R+R SRVG H VTKE+AMKWF+ ++G+I
Sbjct: 123 GIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGIIFQ 175
>sp|P50881|RL11_CHLRE 60S ribosomal protein L11 OS=Chlamydomonas reinhardtii GN=RPL11
PE=2 SV=1
Length = 170
Score = 246 bits (627), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 149/167 (89%)
Query: 19 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 78
MREI++ KLVLNI+V ESGDRL +AAKVLEQL+ Q PV+ +AR+TVRSF IRRNEKI+CY
Sbjct: 1 MREIRISKLVLNIAVAESGDRLQKAAKVLEQLTSQVPVYGRARFTVRSFAIRRNEKISCY 60
Query: 79 VTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFF 138
VTVRG+KA L++ GL VKE+EL+R+NFSDTG FGFGIQEHIDLG+KYDPSTGIYGMDF+
Sbjct: 61 VTVRGEKAYDLVKRGLAVKEFELIRKNFSDTGNFGFGIQEHIDLGLKYDPSTGIYGMDFY 120
Query: 139 VVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKS 185
V LER GYRV RRR+ K+ VG++H+VTKEDA+KWFQ +++GV+LNK+
Sbjct: 121 VCLERRGYRVARRRKQKAHVGVKHKVTKEDAIKWFQQEFDGVVLNKA 167
>sp|Q962U2|RL11_SPOFR 60S ribosomal protein L11 OS=Spodoptera frugiperda GN=RpL11 PE=2
SV=1
Length = 195
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/168 (69%), Positives = 133/168 (79%), Gaps = 1/168 (0%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
N MR + ++KL LNI VGESGDRLTRAAKVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 25 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 84
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 136
+ TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 85 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 144
Query: 137 FFVVLERPGYRVGRRRRCKSRVGIQHRV-TKEDAMKWFQVKYEGVILN 183
F+VVL + ++ + I V TKEDAMKWFQ KY+G+ILN
Sbjct: 145 FYVVLGPTRIQCTTQKTQDWQGWIPPIVLTKEDAMKWFQQKYDGIILN 192
>sp|P24119|RL11_TETTH 60S ribosomal protein L11 OS=Tetrahymena thermophila GN=RPL11 PE=1
SV=1
Length = 172
Score = 224 bits (570), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 11 SDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIR 70
+DKK N MRE+K+ KLV+N VGESGD+LT+AAKVL+ LSGQ PVFS+ARYT+RSFGI+
Sbjct: 2 TDKK-ENKMREVKIAKLVINCCVGESGDKLTKAAKVLKDLSGQEPVFSRARYTIRSFGIK 60
Query: 71 RNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPST 130
RNEK+A +VT+RGDKA +L GLKVKE EL ++NFS+TG FGFGIQEHIDLG+KYDPST
Sbjct: 61 RNEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPST 120
Query: 131 GIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 181
GI+GMDF+VVLERPG RV RRRR SRVG ++KE+ + WF+ ++EG +
Sbjct: 121 GIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEGNV 171
>sp|Q8SSG9|RL11_ENCCU 60S ribosomal protein L11 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL11 PE=1 SV=1
Length = 165
Score = 223 bits (569), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 130/164 (79%)
Query: 19 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 78
MREI ++KL ++I ESG +L RAAKVLEQL+GQ PV SKAR T+R+FGIRRNEKIA +
Sbjct: 1 MREISIKKLSIHICARESGAKLDRAAKVLEQLTGQKPVTSKARMTIRNFGIRRNEKIAVH 60
Query: 79 VTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFF 138
V V G KA +LL + L+VKEYEL FS+ GCFGFGI+EHIDLG+KYDP+ GI+GMDFF
Sbjct: 61 VNVSGKKAYELLNTALRVKEYELKESCFSNNGCFGFGIEEHIDLGLKYDPNIGIFGMDFF 120
Query: 139 VVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 182
V+L RPG RV +R+RCKSRVG + RV EDA KWF +EGV++
Sbjct: 121 VILARPGDRVSKRKRCKSRVGNKQRVYAEDAKKWFVENFEGVLV 164
>sp|Q94793|RL11_TOXCA 60S ribosomal protein L11 (Fragment) OS=Toxocara canis GN=RPL11
PE=2 SV=1
Length = 125
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/114 (78%), Positives = 99/114 (86%)
Query: 12 DKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 71
+KK N MRE+K+QKL LNI VGE GDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRR
Sbjct: 12 EKKARNVMRELKIQKLCLNICVGEFGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRR 71
Query: 72 NEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 125
NEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FG G+QEHIDLGIK
Sbjct: 72 NEKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGLGVQEHIDLGIK 125
>sp|Q5JJG1|RL5_PYRKO 50S ribosomal protein L5P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl5p PE=3 SV=1
Length = 183
Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 121/170 (71%), Gaps = 5/170 (2%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
++PMR+ ++ K+ +NI VGESG+RLT+A +LEQL GQ P+ +A+ T R FGIRR E I
Sbjct: 14 AHPMRKPRIAKVTINIGVGESGERLTKAETMLEQLVGQKPIRRRAKQTNRDFGIRRGEPI 73
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYG 134
A VT+RG+KA Q+L+ L+ + +L NF + G F FGIQEHI++ G++YDP GI+G
Sbjct: 74 AVKVTLRGEKAYQMLDRLLEAVDRKLKASNFDEHGNFCFGIQEHINIPGVEYDPEIGIFG 133
Query: 135 MDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKED----AMKWFQVKYEGV 180
MD V LERPG+RV +R+R + ++ +H++TKE+ AM+ + K EG+
Sbjct: 134 MDVCVTLERPGFRVAKRKRQRRKIPTKHKLTKEEGIVFAMEELKAKVEGL 183
>sp|Q9UX93|RL5_SULSO 50S ribosomal protein L5P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl5p PE=3 SV=1
Length = 182
Score = 160 bits (404), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 113/159 (71%), Gaps = 1/159 (0%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPMR++K+ K+ +NI +GESGDRL +A ++L++L+G PV++ ++ T+R FGIR+ ++I
Sbjct: 14 NPMRKVKLSKVTVNIGLGESGDRLQKAYQLLQELTGAKPVYTISKKTIREFGIRKGQEIG 73
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGM 135
VT+RG +A + L L+ Y L + +F D G FGI EH+ L G +YDP GI+GM
Sbjct: 74 VKVTLRGAQAEEFLRKVLEAIGYRLKKSSFDDYGNVSFGIAEHVILPGARYDPEIGIFGM 133
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQ 174
D + LER GYR+ RRRR K+++ +HRVTKE+AM++ +
Sbjct: 134 DIAITLERAGYRISRRRRKKAKIPKRHRVTKEEAMEFLR 172
>sp|P54040|RL5_METJA 50S ribosomal protein L5P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl5p PE=3 SV=1
Length = 190
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPM + +++K+V+N VGESGDRLT+ A+V+E+L+GQ P+ ++A+ T SFGIR+ I
Sbjct: 10 NPMLKPRIEKVVVNFGVGESGDRLTKGAQVIEELTGQKPIRTRAKQTNPSFGIRKKLPIG 69
Query: 77 CYVTVRGDKAMQLLESGLKVKEYE---LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 132
VT+RG KA + L++ + + E L +F D G F FGI EHID G KYDP GI
Sbjct: 70 LKVTLRGKKAEEFLKNAFEAFQKEGKKLYDYSFDDYGNFSFGIHEHIDFPGQKYDPMIGI 129
Query: 133 YGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQ 174
+GMD V LERPG+RV RR+RC++++ +HR+T+E+A+++ +
Sbjct: 130 FGMDVCVTLERPGFRVKRRKRCRAKIPRRHRLTREEAIEFIE 171
>sp|Q12ZT8|RL5_METBU 50S ribosomal protein L5P OS=Methanococcoides burtonii (strain DSM
6242) GN=rpl5p PE=3 SV=1
Length = 169
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 15 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 74
+SNPMR KV+K+V+++ VGESG L A +LE ++GQT V S A+ T+ +F I++ E
Sbjct: 1 MSNPMRNPKVEKVVVHMGVGESGQHLVDAEGILETITGQTVVRSYAKRTLPAFTIKKGEP 60
Query: 75 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIY 133
I C VT+RG+ A LE+ L + E L F G FG++EH D G++YDP+ GI+
Sbjct: 61 IGCKVTLRGEAAEGFLETSLGIVEKRLNESQFDIFGNVSFGVEEHTDYPGMRYDPNIGIF 120
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
GMD VV+ RPGYRV +RR K ++ H++TKED + +F+ KY
Sbjct: 121 GMDITVVVNRPGYRVSKRRIAKRKIPTSHKITKEDTISFFKDKY 164
>sp|Q74N79|RL5_NANEQ 50S ribosomal protein L5P OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rpl5p PE=3 SV=1
Length = 169
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 15 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 74
+ +PMR+I+++K+ LNI VGESG++L +A ++L++L+GQ PV +KA+ V + IR
Sbjct: 1 MEHPMRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLP 60
Query: 75 IACYVTVRGDKAMQLL-ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 132
I VT+RG+KA ++L E L ++++ +F+D G FGFGI E+I + G+KYDP G+
Sbjct: 61 IGVKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGL 119
Query: 133 YGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQ 174
G++ +V LERPGYRV RRR +S+VG +HR+ KE+ +KW Q
Sbjct: 120 IGLEAYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQ 161
>sp|Q9YF87|RL5_AERPE 50S ribosomal protein L5P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl5p PE=3
SV=2
Length = 192
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 115/166 (69%), Gaps = 2/166 (1%)
Query: 7 VNQASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRS 66
V++ D+ +PMR ++ K+ +NIS+G+SG+RL RAA+VLE+L+GQ PVF KA+ T+R+
Sbjct: 15 VSEILDEWKRSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRA 74
Query: 67 FGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIK 125
FG+R+ E IA VT+RG+KA+ L+ L + + + + G FGI+EHI + G+K
Sbjct: 75 FGVRKGENIAVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVK 134
Query: 126 YDPSTGIYGMDFFVVLERPGYR-VGRRRRCKSRVGIQHRVTKEDAM 170
YDP GI GMD + ++RPG+R V RRR+ + + +HRVT+E+ M
Sbjct: 135 YDPRVGILGMDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETM 180
>sp|O59431|RL5_PYRHO 50S ribosomal protein L5P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl5p PE=3 SV=1
Length = 188
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 117/163 (71%), Gaps = 1/163 (0%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
++PMR ++QK+ +NI VGESG+RLT+A +L++L+GQ P+ KA+ T R FGIRR E I
Sbjct: 17 AHPMRRPRIQKVTINIGVGESGERLTKAEIMLQRLTGQKPIRRKAKKTNRDFGIRRGEPI 76
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYG 134
A VT+RG KA ++L+ L +Y+L +F + G FGI+EHI++ G++YDP GI+G
Sbjct: 77 AVKVTLRGPKAYEMLKRLLAAVDYKLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFG 136
Query: 135 MDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
MD V LERPG+RV RR+R ++R+ +H++TKE+ M + ++
Sbjct: 137 MDVCVTLERPGFRVARRKRKRARIPTRHKLTKEEGMLYMMEEF 179
>sp|A5UL75|RL5_METS3 50S ribosomal protein L5P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl5p PE=3 SV=1
Length = 170
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 109/166 (65%), Gaps = 5/166 (3%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPM E+++ K ++I VGE+G++L+RA +LEQ+ QTPV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGM 135
C +T+RG+KA + +E L+ + F G FGI+EHID+ G+KY+P GI+GM
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKW----FQVKY 177
+ V E+PGYR+ +RR + +V +HR++KE+ MK+ F V Y
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFNVNY 167
>sp|Q6LXE0|RL5_METMP 50S ribosomal protein L5P OS=Methanococcus maripaludis (strain S2 /
LL) GN=rpl5p PE=3 SV=1
Length = 181
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I
Sbjct: 10 EPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIG 69
Query: 77 CYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 132
VT+RG KA + L+ + K L +F G F FG+ EHID G KYDPS GI
Sbjct: 70 LKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGI 129
Query: 133 YGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 178
YGMD V E+ GYRV R+ +S + +H VTK++A+++ Q K++
Sbjct: 130 YGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
>sp|A6UQ57|RL5_METVS 50S ribosomal protein L5P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl5p PE=3 SV=1
Length = 181
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 104/165 (63%), Gaps = 4/165 (2%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
PM++ ++QK+ +N VGE+GDRLT AKV+E L+GQ PV + A+ T +FGIR+ I
Sbjct: 10 EPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIETLTGQAPVRTLAKQTNPAFGIRKKLPIG 69
Query: 77 CYVTVRGDKAMQLLES---GLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 132
VT+RG A + LE+ KV L +F G F FG+ EHID G KYDP+ GI
Sbjct: 70 LKVTLRGKNAEEFLENAFVAFKVSGKVLYASSFDKVGNFSFGVPEHIDFPGQKYDPTVGI 129
Query: 133 YGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
YGMD V E+PGYRV R+ +S + +H V KE+A+++ + K+
Sbjct: 130 YGMDICVTFEKPGYRVKSRKLKRSHIPAKHLVKKEEAIEYIEKKF 174
>sp|P14029|RL5_METVA 50S ribosomal protein L5P OS=Methanococcus vannielii GN=rpl5p PE=3
SV=1
Length = 181
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 104/165 (63%), Gaps = 4/165 (2%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
PM++ ++QK+ +N VGE+GDRLT AKV+E L+GQ PV + A+ T +FGIR+ I
Sbjct: 10 EPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIETLTGQAPVRTLAKQTNPAFGIRKKLPIG 69
Query: 77 CYVTVRGDKAMQLLES---GLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 132
VT+RG A + LE+ KV L +F G F FG+ EHID G KYDP+ GI
Sbjct: 70 LKVTLRGKNAEEFLENAFVAFKVSGKVLYASSFDKVGNFSFGVPEHIDFPGQKYDPTVGI 129
Query: 133 YGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
YGMD V E+PGYRV R+ +S + +H V KE+A+++ + K+
Sbjct: 130 YGMDICVTFEKPGYRVKSRKLKRSHIPAKHLVKKEEAIEYIEKKF 174
>sp|Q8U012|RL5_PYRFU 50S ribosomal protein L5P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl5p PE=1 SV=1
Length = 186
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 115/163 (70%), Gaps = 1/163 (0%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
++PMR +++K+ +NI VGESG+RLT+A +L+QL+GQ P+ KA+ T R FGIRR E I
Sbjct: 17 AHPMRRPRIEKVTINIGVGESGERLTKAEIMLQQLTGQKPIRRKAKKTNRDFGIRRGEPI 76
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYG 134
A VT+RG KA +LL+ L + L +F + G FGI+EHI++ G++YDP GI+G
Sbjct: 77 AVKVTLRGPKAYELLKRLLAAVDNRLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFG 136
Query: 135 MDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
MD V LERPG+RV RR+R ++++ +H++TKE+ M + ++
Sbjct: 137 MDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179
>sp|Q9V1U9|RL5_PYRAB 50S ribosomal protein L5P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl5p PE=3 SV=1
Length = 188
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 115/163 (70%), Gaps = 1/163 (0%)
Query: 16 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 75
++PMR+ +++K+ +NI VGESG+RLT+A +LE+L+GQ P+ KA+ T R FGIRR E I
Sbjct: 17 AHPMRKPRIEKVTINIGVGESGERLTKAEIMLERLTGQKPIRRKAKKTNRDFGIRRGEPI 76
Query: 76 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYG 134
A VT+RG KA ++L+ L + L +F + G FGI EHI++ G++YDP GI+G
Sbjct: 77 AVKVTLRGPKAYEMLKRLLAAVDNRLKASSFDEHGNVCFGIDEHINIPGVEYDPEIGIFG 136
Query: 135 MDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
MD V LERPG+RV RR+R ++++ +H++TKE+ M + ++
Sbjct: 137 MDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179
>sp|A9A9Q1|RL5_METM6 50S ribosomal protein L5P OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rpl5p PE=3 SV=1
Length = 181
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
Query: 18 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIAC 77
PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I
Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGL 70
Query: 78 YVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIY 133
VT+RG A + L + K L +F G F FG+ EHID G KYDPS GIY
Sbjct: 71 KVTLRGKNAEEFLGNAFTAFKTSGKVLYASSFDQVGNFSFGVPEHIDFPGQKYDPSIGIY 130
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 178
GMD V E+ GYRV R+ +S + +H VTK++A+++ Q K++
Sbjct: 131 GMDVCVTFEKSGYRVKSRKVKRSHIPKKHLVTKDEAIEYIQTKFD 175
>sp|Q46GA8|RL5_METBF 50S ribosomal protein L5P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl5p PE=3 SV=1
Length = 169
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Query: 15 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 74
+SN MR V+K+++++ VGESG L A ++L ++GQ V A+ T+ +F I++NE
Sbjct: 1 MSNVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEP 60
Query: 75 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIY 133
I C VT+RG +A Q LE+ L + + L+R F G FGI+EH D G+KYDP+ G++
Sbjct: 61 IGCKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVF 120
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
GMD VV++RPG R+ +RR ++ HRVT ED++ + Y
Sbjct: 121 GMDVTVVIKRPGERICKRRIATRKIPTNHRVTLEDSIAFLNDSY 164
>sp|Q8PV37|RL5_METMA 50S ribosomal protein L5P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpl5p PE=3 SV=1
Length = 169
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Query: 15 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 74
+SNPMR V+K+++++ VGESG L A ++L+ ++GQ V A+ T+ +F I++NE
Sbjct: 1 MSNPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEP 60
Query: 75 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIY 133
I C VT+RG +A + L + ++ E L R F G FGI+EH D G++YDP+ G++
Sbjct: 61 IGCKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVF 120
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
GMD VVL+RPG R+ +RR ++ HRVT +DA+ + Y
Sbjct: 121 GMDVTVVLKRPGERICKRRIATRKIPTDHRVTVDDAIAFLNESY 164
>sp|A6VGZ8|RL5_METM7 50S ribosomal protein L5P OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rpl5p PE=3 SV=1
Length = 181
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
Query: 18 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIAC 77
PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I
Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGL 70
Query: 78 YVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIY 133
VT+RG A + L S K L +F G F FG+ EHID G KYDPS GIY
Sbjct: 71 KVTLRGKNAEEFLGNAFSAFKTCGKVLYASSFDQVGNFSFGVPEHIDFPGQKYDPSIGIY 130
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 178
GMD V E+ GYRV R+ +S + +H VTK++A+++ Q K++
Sbjct: 131 GMDICVTFEKSGYRVKSRKVKRSHIPKKHLVTKDEAIEYIQAKFD 175
>sp|O28367|RL5_ARCFU 50S ribosomal protein L5P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl5p PE=3 SV=1
Length = 178
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 112/159 (70%), Gaps = 2/159 (1%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPMRE+ + K+V+NI VGESG+R +A +LE+L Q P + A+ T+++FGIR+ E I
Sbjct: 14 NPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEAIG 73
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGM 135
VT+RG+KA++ L+ L VKE L R++ + G F FGI EHIDL G+ YDP GI+GM
Sbjct: 74 IKVTLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGM 132
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQ 174
D V L+R GYRV RRRR K+++ HRVTKED ++W +
Sbjct: 133 DVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171
>sp|Q2FT38|RL5_METHJ 50S ribosomal protein L5P OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rpl5p PE=3 SV=1
Length = 168
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NP R + V K+V+++ VGE+GD+L A +++ +++G TPV S A+ T+ +FGIR+ I+
Sbjct: 2 NPNRSVAVDKVVVHMGVGEAGDKLVNAERIISEITGNTPVRSVAKQTLPAFGIRKGAPIS 61
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGM 135
C VT+RG+ A + LE+ +K+ E ++ R F G F FGI+EH D G YDP GI+G+
Sbjct: 62 CRVTLRGEAAEKFLETSIKIVENKINSRAFDKQGNFSFGIEEHTDYPGQSYDPKVGIFGL 121
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKY 177
D VVL+R G R+ RR + ++ ++ VT EDA + + +Y
Sbjct: 122 DVTVVLKRNGVRIARRHIQQKKLPLKQLVTVEDAKLFLKDRY 163
>sp|A4FWA8|RL5_METM5 50S ribosomal protein L5P OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rpl5p PE=3 SV=1
Length = 181
Score = 139 bits (351), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
Query: 18 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIAC 77
PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T ++GIR+ I
Sbjct: 11 PMKKPRIQKITVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAYGIRKKLPIGL 70
Query: 78 YVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIY 133
VT+RG A + L+ + K L +F G F FG+ EHID G KYDPS GIY
Sbjct: 71 KVTLRGKNAEEFLKNAFTAFKACGKVLYASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIY 130
Query: 134 GMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 178
GMD V ++ GYRV R+ +S + +H VTK++A+++ Q K++
Sbjct: 131 GMDVCVTFDKAGYRVKSRKLKRSHIPKKHLVTKDEAIEYIQTKFD 175
>sp|O26124|RL5_METTH 50S ribosomal protein L5P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl5p PE=3 SV=1
Length = 168
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 17 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 76
NPM E+++ K+ LNI VGE G++L RA ++LE++SGQ PV + ++ T FGIR+ + IA
Sbjct: 2 NPMEEVRIFKVTLNIGVGEGGEKLARAERLLEEMSGQKPVRTHSKVTNPEFGIRKKQPIA 61
Query: 77 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGM 135
C VT+RG++A ++L+ L+ L F + G GI EHID+ G+KYDP GI+GM
Sbjct: 62 CKVTLRGERAEKVLKMFLEGIGNRLKASQFDEYGNVSMGIDEHIDIPGMKYDPEIGIFGM 121
Query: 136 DFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 178
+ V E+PG+R+ RRR + +V +HRV++E+A+++ + K++
Sbjct: 122 NLSVTFEKPGHRINRRRIQRRKVPQKHRVSREEAIEFMKEKFQ 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,627,275
Number of Sequences: 539616
Number of extensions: 2750596
Number of successful extensions: 7071
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 5628
Number of HSP's gapped (non-prelim): 866
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)