Query 029665
Match_columns 190
No_of_seqs 144 out of 911
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 16:33:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00156 60S ribosomal protein 100.0 4.2E-72 9.2E-77 459.7 15.9 169 15-183 4-172 (172)
2 PRK04219 rpl5p 50S ribosomal p 100.0 2E-69 4.4E-74 446.4 15.1 168 15-182 8-176 (177)
3 COG0094 RplE Ribosomal protein 100.0 2.3E-62 5.1E-67 402.7 11.4 153 10-163 17-180 (180)
4 KOG0397 60S ribosomal protein 100.0 2.1E-56 4.5E-61 357.6 9.1 173 13-185 4-176 (176)
5 PRK00010 rplE 50S ribosomal pr 100.0 2.5E-53 5.5E-58 351.5 12.1 136 13-148 20-165 (179)
6 CHL00078 rpl5 ribosomal protei 100.0 5.6E-53 1.2E-57 350.0 11.9 135 13-147 21-165 (181)
7 KOG0398 Mitochondrial/chloropl 100.0 8.6E-41 1.9E-45 284.5 9.5 139 13-151 112-264 (278)
8 PF00673 Ribosomal_L5_C: ribos 100.0 2.6E-29 5.7E-34 189.0 6.7 74 74-147 1-81 (95)
9 PF00281 Ribosomal_L5: Ribosom 99.8 2.1E-21 4.5E-26 133.6 5.3 54 17-70 1-56 (56)
10 COG1504 Uncharacterized conser 68.6 4.8 0.0001 31.8 2.6 33 154-186 39-71 (121)
11 PF08261 Carcinustatin: Carcin 38.9 10 0.00022 16.6 -0.0 7 110-116 2-8 (8)
12 TIGR02889 spore_YpeB germinati 37.3 64 0.0014 30.6 5.0 106 63-179 247-388 (435)
13 cd01803 Ubiquitin Ubiquitin. U 24.1 1.7E+02 0.0037 19.5 4.2 44 40-83 23-75 (76)
14 PF09456 RcsC: RcsC Alpha-Beta 23.6 70 0.0015 24.1 2.3 25 77-101 2-26 (92)
15 PF01807 zf-CHC2: CHC2 zinc fi 22.6 50 0.0011 24.4 1.3 23 162-184 74-96 (97)
16 PRK08474 F0F1 ATP synthase sub 21.6 4.4E+02 0.0095 21.3 6.8 52 23-74 102-153 (176)
17 TIGR01764 excise DNA binding d 21.2 42 0.00092 20.3 0.6 18 158-175 32-49 (49)
18 PF05953 Allatostatin: Allatos 20.9 35 0.00076 16.3 0.1 7 110-116 4-10 (11)
19 TIGR01589 A_thal_3526 uncharac 20.3 62 0.0013 22.5 1.3 17 164-180 16-32 (57)
No 1
>PTZ00156 60S ribosomal protein L11; Provisional
Probab=100.00 E-value=4.2e-72 Score=459.69 Aligned_cols=169 Identities=79% Similarity=1.272 Sum_probs=166.8
Q ss_pred cCCCCCceeeeEEEEEccCCchhHHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhHHHHHHHhh
Q 029665 15 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL 94 (190)
Q Consensus 15 ~~n~m~iP~I~KIvln~gvges~~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~my~FL~kli 94 (190)
.+|||++|+|+|||||+|+|++++.|+.|..+|++||||+|++|+||+||++||||+|+||||+|||||++||+||+||+
T Consensus 4 ~~n~m~~PkI~KIvvN~gvGe~~~~L~~a~~~L~~ITGQkPv~tkAKksia~FkiRkG~pIG~kVTLRg~~m~eFLdrli 83 (172)
T PTZ00156 4 KENPMRKIRIEKLVLNICVGESGDRLTRAAKVLEQLTGQKPVFSKARYTVRSFGIRRNEKIACHVTVRGDKAEEILERGL 83 (172)
T ss_pred cCCCccCceeEEEEEEcCcCchHHHHHHHHHHHHHHcCCceEEEEhhcccccccccCCCEEEEEEEEchHHHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeEEecccccccccccccCCCCccccEEEEEeecccceeeeeeeccCcCCCCcccChHHHHHHhH
Q 029665 95 KVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQ 174 (190)
Q Consensus 95 rirdf~l~~~sfD~~GN~sfGi~e~~~FEi~yd~~~~i~GmdItivt~a~g~r~a~r~~~~~~i~~~hri~~ee~~~~~~ 174 (190)
++|||+|+.++||++|||+|||+||++||++|||..+++||||+|++++||||+++|++++++||.+|||++|||++||+
T Consensus 84 rirDf~l~~~sFD~~GN~sfGI~e~i~fei~yD~~~~i~GmdI~ivl~rpG~rv~~R~~~~~~i~~~hrv~~eea~~~~~ 163 (172)
T PTZ00156 84 KVKEFELKKRNFSDTGNFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLGRPGFRVARRKRKQSKVGKSHRVTKEEAMKWFK 163 (172)
T ss_pred hhhcccccCcccCCCcccccCCchheeeceecCcccCcccCceEEEEeCCcceeeecccccccCCCCceeCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccEEEec
Q 029665 175 VKYEGVILN 183 (190)
Q Consensus 175 ~~~~~~v~~ 183 (190)
++|||+|++
T Consensus 164 ~~~~v~v~~ 172 (172)
T PTZ00156 164 TTFDGIILN 172 (172)
T ss_pred hhcCEEEcC
Confidence 999999975
No 2
>PRK04219 rpl5p 50S ribosomal protein L5P; Reviewed
Probab=100.00 E-value=2e-69 Score=446.44 Aligned_cols=168 Identities=49% Similarity=0.861 Sum_probs=165.8
Q ss_pred cCCCCCceeeeEEEEEccCCchhHHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhHHHHHHHhh
Q 029665 15 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL 94 (190)
Q Consensus 15 ~~n~m~iP~I~KIvln~gvges~~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~my~FL~kli 94 (190)
.+|||++|+|+|||||+|+|++++.|..|..+|++||||+|++++||++|++||||+|+||||+|||||++||+||++|+
T Consensus 8 ~~N~m~iPkI~KIvin~gvgea~~~L~~a~~~L~~ITGQkP~~tkAKksIa~FkiRkG~pIG~kVTLRg~~m~~FL~rli 87 (177)
T PRK04219 8 EMNPMRKPRIEKVVVNIGVGESGERLTKAEKLLEELTGQKPVRTRAKKTIPDFGIRKGEPIGVKVTLRGEKAEEFLKTAL 87 (177)
T ss_pred cCCCccCceeeEEEEEcCcHHHHHHHHHHHHHHHHHhCCCceeeeccccccccCccCCCEEEEEEEEccHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeEEecccccccc-cccccCCCCccccEEEEEeecccceeeeeeeccCcCCCCcccChHHHHHHh
Q 029665 95 KVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWF 173 (190)
Q Consensus 95 rirdf~l~~~sfD~~GN~sfGi~e~~~F-Ei~yd~~~~i~GmdItivt~a~g~r~a~r~~~~~~i~~~hri~~ee~~~~~ 173 (190)
.+.||+|+.++||++|||+|||+||++| |++|||..+++||||+|||++||||+++|++++++||++|||++|||++||
T Consensus 88 ~ivd~~l~~~sfD~~GN~sfGI~e~~~fpei~yd~~~~i~GmdI~ivt~rpg~rv~~r~~~~~~i~~~~~~~~~e~~~~~ 167 (177)
T PRK04219 88 EAVGNRLKASSFDETGNVSFGIEEHIDFPGVKYDPEIGIFGMDVCVTLERPGYRVARRRRKRRKIPSRHRVTKEEAIEFL 167 (177)
T ss_pred HhhcCCCCCcccCCCceEeeCchhhhccCccccCcccccccccEEEEEcCCccchhhhhhccccCCCCceeCHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HhhccEEEe
Q 029665 174 QVKYEGVIL 182 (190)
Q Consensus 174 ~~~~~~~v~ 182 (190)
+++|||+|+
T Consensus 168 ~~~~~~~~~ 176 (177)
T PRK04219 168 EENFGVEVV 176 (177)
T ss_pred HHhcCeEEe
Confidence 999999996
No 3
>COG0094 RplE Ribosomal protein L5 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-62 Score=402.66 Aligned_cols=153 Identities=37% Similarity=0.642 Sum_probs=145.4
Q ss_pred ccccccCCCCCceeeeEEEEEccCCch---hHHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhH
Q 029665 10 ASDKKLSNPMREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKA 86 (190)
Q Consensus 10 ~~~~~~~n~m~iP~I~KIvln~gvges---~~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~m 86 (190)
.++.+|.|||++|+|+|||||+||||| ++.|+.|..+|++||||||++|+||+||++||||+|+||||||||||++|
T Consensus 17 ~~~~~y~n~M~~P~i~KVvvNmGvGEa~~d~~~l~~A~~~L~~ItGQKPv~tkAkksia~FkiR~g~pIG~KVTLRg~rm 96 (180)
T COG0094 17 IKKFGYSNPMQVPRIEKVVVNMGVGEAAADGKRLEKAAKDLELITGQKPVITKAKKSIAGFKIREGMPIGVKVTLRGERM 96 (180)
T ss_pred HHhhccCCccccceeEEEEEEccchhhhhchHHHHHHHHHHHHHhCCCceeeehhcccccccccCCCeeeEEEEEchHHH
Confidence 345679999999999999999999998 68999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-----cccccc-cccCCCCCceeEEecccccccc-cccccCCCCccccEEEEEeecccceeeeeee-ccCcC
Q 029665 87 MQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGYRVGRRRR-CKSRV 158 (190)
Q Consensus 87 y~FL~kli-----rirdf~-l~~~sfD~~GN~sfGi~e~~~F-Ei~yd~~~~i~GmdItivt~a~g~r~a~r~~-~~~~i 158 (190)
|+||++|+ |+|||+ |+.+|||++|||||||+||++| |++|||.++++||||+|+|+|+| ++.+|++ +...+
T Consensus 97 ~eFL~rl~~i~lPrvrdfrGls~~sFDg~GN~sfGI~E~i~FPei~yD~~~~i~GMdi~ivtta~~-d~e~R~ll~~~~~ 175 (180)
T COG0094 97 YEFLDRLLNIALPRVRDFRGLSPKSFDGRGNYSFGIKEQIIFPEIDYDPIIGIRGMDITIVTTAKG-DVEARALLSAFGI 175 (180)
T ss_pred HHHHHHHHHhhccccccccCCCccccCCCCceEecchheeecCccccCccCCccCceEEEEecCCC-hHHHHHHHHhcCC
Confidence 99999999 889999 9999999999999999999999 99999999999999999999999 5555555 99999
Q ss_pred CCCcc
Q 029665 159 GIQHR 163 (190)
Q Consensus 159 ~~~hr 163 (190)
|.+|+
T Consensus 176 Pf~~~ 180 (180)
T COG0094 176 PFRKR 180 (180)
T ss_pred CCCCC
Confidence 99986
No 4
>KOG0397 consensus 60S ribosomal protein L11 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-56 Score=357.62 Aligned_cols=173 Identities=84% Similarity=1.282 Sum_probs=169.8
Q ss_pred cccCCCCCceeeeEEEEEccCCchhHHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhHHHHHHH
Q 029665 13 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLES 92 (190)
Q Consensus 13 ~~~~n~m~iP~I~KIvln~gvges~~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~my~FL~k 92 (190)
....|||+..+|.|+|||+++|||++.|..|.++||++|||+|++++|+.+|.+|+||.++.|+|+||+||+++++.|++
T Consensus 4 ~~~~npMrel~i~KL~lnIcvgESGdrLtRAaKvLEQLtGQ~pvfskaryTvR~fGirRNEKIAvh~tVrG~KAeeiLe~ 83 (176)
T KOG0397|consen 4 KKAQNPMRELKIQKLVLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHVTVRGPKAEEILER 83 (176)
T ss_pred ccccCchHhhhhheeeEEEeecccchHHHHHHHHHHHhcCCCccchhhhhhHHhhccccCceEEEEEEeeCccHHHHHHh
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccCCCCCceeEEecccccccccccccCCCCccccEEEEEeecccceeeeeeeccCcCCCCcccChHHHHHH
Q 029665 93 GLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKW 172 (190)
Q Consensus 93 lirirdf~l~~~sfD~~GN~sfGi~e~~~FEi~yd~~~~i~GmdItivt~a~g~r~a~r~~~~~~i~~~hri~~ee~~~~ 172 (190)
.|++++|+|..++|+.+|||.|||.||++++|.|||.++|||||+.+|+.+||+|+++|+|+++++|.+||+++||||+|
T Consensus 84 gLkVkeYeL~~~nFS~tgnFGFGiqEHIDLGikYDPsiGIyGmDFyVvl~RpG~rv~~rkr~~g~vG~~hr~~ked~~kw 163 (176)
T KOG0397|consen 84 GLKVKEYELRKRNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVLGRPGYRVARRKRCKGRVGNKHRVTKEDAMKW 163 (176)
T ss_pred ccchhhhhhhhhcccccCCcccchhhheeccceeCCCcceeeeeEEEEecCCcchhhhhccCcCccCccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhccEEEecCc
Q 029665 173 FQVKYEGVILNKS 185 (190)
Q Consensus 173 ~~~~~~~~v~~~~ 185 (190)
||++|+..|+|.|
T Consensus 164 Fq~kydgvil~~k 176 (176)
T KOG0397|consen 164 FQQKYDGVILPKK 176 (176)
T ss_pred HHHhCceeecCCC
Confidence 9999999999875
No 5
>PRK00010 rplE 50S ribosomal protein L5; Validated
Probab=100.00 E-value=2.5e-53 Score=351.47 Aligned_cols=136 Identities=32% Similarity=0.548 Sum_probs=130.4
Q ss_pred cccCCCCCceeeeEEEEEccCCchhH---HHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhHHHH
Q 029665 13 KKLSNPMREIKVQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQL 89 (190)
Q Consensus 13 ~~~~n~m~iP~I~KIvln~gvges~~---~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~my~F 89 (190)
.+|+|+|++|+|+|||||+|+|++++ .|..|..+|++||||+|++|+||+||++||||+|+||||||||||++||+|
T Consensus 20 ~~y~n~m~iPki~KIvin~gvg~~~~~~~~l~~a~~~L~~ITGQkP~~t~aKksi~~fkiRkg~piG~kVTLRg~~my~F 99 (179)
T PRK00010 20 FGYKNVMQVPKLEKIVLNMGVGEAVADKKLLENAVEDLTLITGQKPVVTKAKKSIAGFKLREGMPIGCKVTLRGERMYEF 99 (179)
T ss_pred hCCCCcccCCceeEEEEEccCcchhhchHHHHHHHHHHHHHhCCceEEEeccccccccCCCCCCEEEEEEEECcHHHHHH
Confidence 46999999999999999999999864 799999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-----cccccc-cccCCCCCceeEEecccccccc-cccccCCCCccccEEEEEeeccccee
Q 029665 90 LESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGYRV 148 (190)
Q Consensus 90 L~kli-----rirdf~-l~~~sfD~~GN~sfGi~e~~~F-Ei~yd~~~~i~GmdItivt~a~g~r~ 148 (190)
|+||+ |+|||+ ++.++||++|||+|||+||++| |++||++++++||||||||+|+++..
T Consensus 100 L~kli~~vlPrirdf~Gi~~~sfD~~Gn~sfGi~e~~~FPei~yd~~~~i~G~~Itivtta~t~~e 165 (179)
T PRK00010 100 LDRLINIALPRVRDFRGLSPKSFDGRGNYTLGIKEQIIFPEIDYDKIDKIRGMDITIVTTAKTDEE 165 (179)
T ss_pred HHHHHHHhcccccccccccccccCCCceEEECcchhhcCCCcccCccCCcCCceEEEEeccCCHHH
Confidence 99999 799999 9999999999999999999999 99999999999999999999987433
No 6
>CHL00078 rpl5 ribosomal protein L5
Probab=100.00 E-value=5.6e-53 Score=349.98 Aligned_cols=135 Identities=27% Similarity=0.506 Sum_probs=129.6
Q ss_pred cccCCCCCceeeeEEEEEccCCchh---HHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhHHHH
Q 029665 13 KKLSNPMREIKVQKLVLNISVGESG---DRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQL 89 (190)
Q Consensus 13 ~~~~n~m~iP~I~KIvln~gvges~---~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~my~F 89 (190)
.+|+|+|++|+|+|||||+|+|++. +.|+.|..+|++||||+|++|+||+||++||||+|+|+||||||||++||+|
T Consensus 21 ~~~~n~m~iP~i~KIvin~gvg~~~~~~k~l~~a~~~L~~ITGQkP~~t~AKksia~FkiRkg~piG~kVTLRg~~my~F 100 (181)
T CHL00078 21 FLYKNIHQVPKLKKIVINRGLGEASQNSKILESSIKELTIITGQKPIITRAKKAIAGFKIREKMPVGVSVTLRGDKMYAF 100 (181)
T ss_pred hCCCCcccCCceeEEEEecCchhhhhchHHHHHHHHHHHHHhCCceEEEeecccchhcCccCCCEEEEEEEECcHhHHHH
Confidence 4699999999999999999999975 3699999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-----cccccc-cccCCCCCceeEEecccccccc-cccccCCCCccccEEEEEeecccce
Q 029665 90 LESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGYR 147 (190)
Q Consensus 90 L~kli-----rirdf~-l~~~sfD~~GN~sfGi~e~~~F-Ei~yd~~~~i~GmdItivt~a~g~r 147 (190)
|+||+ |+|||+ ++.++||++|||+|||+||++| |++||++.+++||||||||+|.++.
T Consensus 101 L~kli~~vlPrirdf~Gi~~~sfd~~Gn~sfGi~e~~~FPEi~~d~~~~i~G~~Itivtta~t~~ 165 (181)
T CHL00078 101 LDRLINLALPRIRDFQGLSPKSFDGHGNYNLGLKEQLMFPEIDYDKIDQIRGMDISIVTTAKTDQ 165 (181)
T ss_pred HHHHHHHhcccccccccccccccCCCceEEECcchhccCCCcccCccCCcCCCeEEEEEeeCCHH
Confidence 99999 899999 9999999999999999999999 9999999999999999999998643
No 7
>KOG0398 consensus Mitochondrial/chloroplast ribosomal protein L5/L7 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.6e-41 Score=284.54 Aligned_cols=139 Identities=25% Similarity=0.412 Sum_probs=130.7
Q ss_pred cccCCCCCceeeeEEEEEccCCchh---HHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCceEEEEEEEcchhHHHH
Q 029665 13 KKLSNPMREIKVQKLVLNISVGESG---DRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQL 89 (190)
Q Consensus 13 ~~~~n~m~iP~I~KIvln~gvges~---~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~piG~kVTLRG~~my~F 89 (190)
..|-|++++|+|+||||||+++|+. ..|+.|.+++++||||+|..++||++|+.||||+|+|+|+||||||+.||.|
T Consensus 112 ~~~vn~~nvP~v~kVVvnc~~~eA~~n~~~l~~am~~~~~ITG~kP~~~~ar~dV~twKlR~g~p~G~kVtL~G~~My~F 191 (278)
T KOG0398|consen 112 FKYVNIHNVPKVQKVVVNCGIGEAAQNDKGLEAAMKDIALITGQKPIKTRARADVATWKLREGQPLGIKVTLRGDVMYSF 191 (278)
T ss_pred ccccChhhCCceeeeeeecccHHhhhhHHHHHHHHHHHHHHhCCCcceeeecccCCceeeccCCcceeEEEEechHHHHH
Confidence 4588999999999999999999985 3699999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-----cccccc-cccCCCCCceeEEeccc--ccccc-ccc--ccCCCCccccEEEEEeecccceeeee
Q 029665 90 LESGL-----KVKEYE-LLRRNFSDTGCFGFGIQ--EHIDL-GIK--YDPSTGIYGMDFFVVLERPGYRVGRR 151 (190)
Q Consensus 90 L~kli-----rirdf~-l~~~sfD~~GN~sfGi~--e~~~F-Ei~--yd~~~~i~GmdItivt~a~g~r~a~r 151 (190)
|++|+ |+|||+ ++++|+|++||||||++ ++-.| ||+ ||.++..+||||+|.|+++.++.||.
T Consensus 192 Ls~L~elvLPr~rdfkGvSp~Sgd~~GniSfGl~aEd~~~FPeI~An~d~~pkt~Gm~vnI~T~ak~d~~ar~ 264 (278)
T KOG0398|consen 192 LSRLIELVLPRTRDFKGVSPSSGDGNGNISFGLKAEDQGVFPEIRANFDAVPKTRGMDVNISTTAKSDQEARK 264 (278)
T ss_pred HHHHHHHhccccccccCcCCCCcCCCCCEEeccchhhcccCchhhhhhhccccccceeEeecccccchHHHHH
Confidence 99999 999999 99999999999999999 34457 886 99999999999999999999998875
No 8
>PF00673 Ribosomal_L5_C: ribosomal L5P family C-terminus; InterPro: IPR002132 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal protein L5, ~180 amino acids in length, is one of the proteins from the large ribosomal subunit. In Escherichia coli, L5 is known to be involved in binding 5S RNA to the large ribosomal subunit. It belongs to a family of ribosomal proteins which, on the basis of sequence similarities [, , , ], groups: Eubacterial L5. Algal chloroplast L5. Cyanelle L5. Archaebacterial L5. Mammalian L11. Tetrahymena thermophila L21. Dictyostelium discoideum (Slime mold) L5 Saccharomyces cerevisiae (Baker's yeast) L16 (39A). Plant mitochondrial L5. ; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 1IQ4_B 2ZJR_D 2ZJP_D 3PIO_D 3CF5_D 2ZJQ_D 3DLL_D 3PIP_D 2WDL_G 3UZN_G ....
Probab=99.96 E-value=2.6e-29 Score=188.96 Aligned_cols=74 Identities=39% Similarity=0.776 Sum_probs=70.4
Q ss_pred eEEEEEEEcchhHHHHHHHhh-----cccccc-cccCCCCCceeEEecccccccc-cccccCCCCccccEEEEEeecccc
Q 029665 74 KIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 146 (190)
Q Consensus 74 piG~kVTLRG~~my~FL~kli-----rirdf~-l~~~sfD~~GN~sfGi~e~~~F-Ei~yd~~~~i~GmdItivt~a~g~ 146 (190)
||||||||||++||+||+||+ |+|||+ ++.++||.+|||+|||+||++| |++||++++++||||+|+|+++..
T Consensus 1 PiG~kvTLRg~~m~~FL~kli~~vlPrik~f~g~~~~~fd~~Gn~sfGi~e~~~Fpei~yd~~~~i~G~~i~i~t~ak~~ 80 (95)
T PF00673_consen 1 PIGCKVTLRGKKMYEFLDKLITIVLPRIKDFKGLKASSFDNSGNFSFGIKEHILFPEIEYDPFPGIFGMDITIVTTAKTP 80 (95)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHTTTTTSSSTSSBSSTTBSSSSEEEEEESSSSSSSSSSSTSSSSSSCEEEEEEESCSSH
T ss_pred CeEEEEEEccHHHHHHHHHHHHHhhhhcccccccCccccCCCceEEEEeeeeeecCCccccCCCCccceEEEEEEecCCc
Confidence 899999999999999999999 899999 9999999999999999999999 999999999999999999777654
Q ss_pred e
Q 029665 147 R 147 (190)
Q Consensus 147 r 147 (190)
.
T Consensus 81 ~ 81 (95)
T PF00673_consen 81 K 81 (95)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>PF00281 Ribosomal_L5: Ribosomal protein L5; InterPro: IPR002132 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal protein L5, ~180 amino acids in length, is one of the proteins from the large ribosomal subunit. In Escherichia coli, L5 is known to be involved in binding 5S RNA to the large ribosomal subunit. It belongs to a family of ribosomal proteins which, on the basis of sequence similarities [, , , ], groups: Eubacterial L5. Algal chloroplast L5. Cyanelle L5. Archaebacterial L5. Mammalian L11. Tetrahymena thermophila L21. Dictyostelium discoideum (Slime mold) L5 Saccharomyces cerevisiae (Baker's yeast) L16 (39A). Plant mitochondrial L5. ; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 1IQ4_B 4A1A_D 4A1C_D 4A17_D 4A1E_D 3BBO_H 3O5H_K 1S1I_J 3O58_K 3IZS_E ....
Probab=99.84 E-value=2.1e-21 Score=133.58 Aligned_cols=54 Identities=50% Similarity=0.805 Sum_probs=50.0
Q ss_pred CCCCceeeeEEEEEccCCchhHH--HHHHHHHHHHhhCCCcEEEeeeecccCeeee
Q 029665 17 NPMREIKVQKLVLNISVGESGDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIR 70 (190)
Q Consensus 17 n~m~iP~I~KIvln~gvges~~~--L~~a~~~L~~ITGQkP~~tkAKksia~FkiR 70 (190)
|+|++|+|+|||||+|+|++++. |+.|..+|+.||||+|++|+||+||++||||
T Consensus 1 N~m~vPki~KIvin~gvg~~~~~k~l~~a~~~L~~ItGQkp~~t~aKksia~FkiR 56 (56)
T PF00281_consen 1 NVMQVPKIEKIVINIGVGEAGDDKVLEKAKKELEQITGQKPVITKAKKSIANFKIR 56 (56)
T ss_dssp STTTSSEEEEEEEEEESSTTSSTHHHHHHHHHHHHHHSS--EEEEESSSBSSSTBS
T ss_pred CCccccEEEEEEEECCCCccccchHHHHHHHHHHHHhCCceeEEEeeccccccccC
Confidence 89999999999999999998755 9999999999999999999999999999997
No 10
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=68.55 E-value=4.8 Score=31.83 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=28.6
Q ss_pred ccCcCCCCcccChHHHHHHhHhhccEEEecCcc
Q 029665 154 CKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 186 (190)
Q Consensus 154 ~~~~i~~~hri~~ee~~~~~~~~~~~~v~~~~~ 186 (190)
-++|-|-+|+++.||+.+.|.+..++.|+-.-|
T Consensus 39 skrK~GTSHkl~~eEle~~lee~~E~ivvGTG~ 71 (121)
T COG1504 39 SKRKYGTSHKLALEELEELLEEGPEVIVVGTGQ 71 (121)
T ss_pred hhhhcCcccccCHHHHHHHHhcCCcEEEEecCc
Confidence 467889999999999999999999999886543
No 11
>PF08261 Carcinustatin: Carcinustatin peptide
Probab=38.88 E-value=10 Score=16.63 Aligned_cols=7 Identities=43% Similarity=1.208 Sum_probs=5.0
Q ss_pred eeEEecc
Q 029665 110 GCFGFGI 116 (190)
Q Consensus 110 GN~sfGi 116 (190)
|-|+||+
T Consensus 2 gpy~fgl 8 (8)
T PF08261_consen 2 GPYSFGL 8 (8)
T ss_pred CcccccC
Confidence 6678875
No 12
>TIGR02889 spore_YpeB germination protein YpeB. Members of this family are YpeB, a protein usually encoded with the putative spore-cortex-lytic enzyme SleB and required, together with SleB, for normal germination. This family is retricted to endospore-forming species in the Firmicutes lineage of bacteria, and found in all such species to date except Clostridium perfringens. The matching phenotypes of mutants in SleB (called a lytic transglycosylase) and YpeB suggests that YpeB is necessary to allow SleB to function.
Probab=37.31 E-value=64 Score=30.64 Aligned_cols=106 Identities=17% Similarity=0.296 Sum_probs=62.8
Q ss_pred cccCeeeee-----CceEEEEEEEcch-----------------------hHHHHHHHhhcccccc-cccCCCCCceeEE
Q 029665 63 TVRSFGIRR-----NEKIACYVTVRGD-----------------------KAMQLLESGLKVKEYE-LLRRNFSDTGCFG 113 (190)
Q Consensus 63 sia~FkiRk-----G~piG~kVTLRG~-----------------------~my~FL~klirirdf~-l~~~sfD~~GN~s 113 (190)
.++.|.++- +.++-|-||-+|- ++.+||++. -..+.. ......|..+.|+
T Consensus 247 ~~~~Y~f~~~~~~~~~~~~~~vsk~GG~~i~~l~~R~v~~~~is~~eA~~kA~~fL~~~-G~~nm~~ty~~~~d~~~~~~ 325 (435)
T TIGR02889 247 GIPTYSFEVKDPGRKARIYMNVSKKGGHPLWFLDNRPVSKPKISLNEAVNKAKKFLEKI-GFKDMEPTESDKYDNVGVIS 325 (435)
T ss_pred CcceEEEEEEeCCCCceEEEEEEcCCCEEEEEEcCCCCCCCCcCHHHHHHHHHHHHHHc-CcccceehhhhccCCEEEEE
Confidence 355555432 2457788887765 345566654 233333 3334468888888
Q ss_pred ecccc-cccc-----cccccCC-CCccccEEEEEeecccceeeeeeeccCcCCCCcccChHHHHHHhHhhccE
Q 029665 114 FGIQE-HIDL-----GIKYDPS-TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 179 (190)
Q Consensus 114 fGi~e-~~~F-----Ei~yd~~-~~i~GmdItivt~a~g~r~a~r~~~~~~i~~~hri~~ee~~~~~~~~~~~ 179 (190)
|-=.. -+.+ .+..... -.+.|++ +.+|-...+. +.+|+. .||.|||.+.+-..+.|
T Consensus 326 yv~~~~gV~iYpd~IkVkVALDnGeIiGf~------a~~Yl~~h~~---R~ip~p-kls~eeAr~~vnp~l~v 388 (435)
T TIGR02889 326 YVYVQNDVRVYPDQIKVKVALDDGDVVGFD------ARQYLTSHRK---RTLPKP-KLTEEEARSKVNKHLKI 388 (435)
T ss_pred EEEeeCCEEEcCCeEEEEEEccCCeEEEEe------cccchhhccc---ccCCCC-cCCHHHHHHhhCCCcee
Confidence 85332 2221 2222222 3455654 7888877775 467765 99999999998776654
No 13
>cd01803 Ubiquitin Ubiquitin. Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric multiubiquitin protein chains)
Probab=24.08 E-value=1.7e+02 Score=19.50 Aligned_cols=44 Identities=14% Similarity=0.353 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhCCCc---EEE------eeeecccCeeeeeCceEEEEEEEcc
Q 029665 40 LTRAAKVLEQLSGQTP---VFS------KARYTVRSFGIRRNEKIACYVTVRG 83 (190)
Q Consensus 40 L~~a~~~L~~ITGQkP---~~t------kAKksia~FkiRkG~piG~kVTLRG 83 (190)
+......++..+|-.| .+. .-.++++.+++..|.-+-+.+.|+|
T Consensus 23 V~~lK~~i~~~~g~~~~~q~L~~~g~~L~d~~~L~~~~i~~~~~i~l~~~~~g 75 (76)
T cd01803 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75 (76)
T ss_pred HHHHHHHHHHHhCCCHHHeEEEECCEECCCCCcHHHcCCCCCCEEEEEEEccC
Confidence 4445556666666543 222 2345789999999999999998887
No 14
>PF09456 RcsC: RcsC Alpha-Beta-Loop (ABL); InterPro: IPR019017 This domain is found in the C terminus of the signal transduction response regulator (phospho-relay) kinase RcsC, between the ATP-binding region (IPR003594 from INTERPRO) and the receiver region (IPR001789 from INTERPRO). This domain forms a discrete alpha/beta/loop structure []. The Rcs signalling pathway controls a variety of physiological functions like capsule synthesis, cell division or motility in prokaryotes. The Rcs regulation cascade, involving a multi-step phosphorelay between the two membrane-bound hybrid sensor kinases RcsC and RcsD and the global regulator RcsB, is, up to now, one of the most complicated regulatory systems in bacteria []. ; GO: 0004673 protein histidine kinase activity, 0004871 signal transducer activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent, 0018106 peptidyl-histidine phosphorylation, 0005886 plasma membrane, 0016021 integral to membrane; PDB: 2AYY_A 2AYX_A.
Probab=23.62 E-value=70 Score=24.14 Aligned_cols=25 Identities=16% Similarity=0.445 Sum_probs=17.5
Q ss_pred EEEEEcchhHHHHHHHhhccccccc
Q 029665 77 CYVTVRGDKAMQLLESGLKVKEYEL 101 (190)
Q Consensus 77 ~kVTLRG~~my~FL~klirirdf~l 101 (190)
|=+.+|...+..||.+|++--.+++
T Consensus 2 cwL~irNa~Le~yL~~lL~~~G~~v 26 (92)
T PF09456_consen 2 CWLAIRNAYLESYLQRLLSYHGFQV 26 (92)
T ss_dssp EEEE---HHHHHHHHHHHCTTTEEE
T ss_pred EEEEehhHHHHHHHHHHHHHCCcEE
Confidence 5678999999999999996555553
No 15
>PF01807 zf-CHC2: CHC2 zinc finger; InterPro: IPR002694 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents CycHisCysCys (CHC2) type zinc finger domains, which are found in bacteria and viruses. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0003896 DNA primase activity, 0008270 zinc ion binding, 0006260 DNA replication; PDB: 1D0Q_B 2AU3_A.
Probab=22.61 E-value=50 Score=24.41 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=15.2
Q ss_pred cccChHHHHHHhHhhccEEEecC
Q 029665 162 HRVTKEDAMKWFQVKYEGVILNK 184 (190)
Q Consensus 162 hri~~ee~~~~~~~~~~~~v~~~ 184 (190)
+.++-.||.+||.+.||+++...
T Consensus 74 ~~~~f~eAv~~l~~~~~i~i~~~ 96 (97)
T PF01807_consen 74 EGCSFKEAVKWLAEEFGIEIPNE 96 (97)
T ss_dssp HT--HHHHHHHHHHHHT---GTT
T ss_pred hCCCHHHHHHHHHHHhCCCCCCC
Confidence 45688999999999999988654
No 16
>PRK08474 F0F1 ATP synthase subunit delta; Validated
Probab=21.57 E-value=4.4e+02 Score=21.28 Aligned_cols=52 Identities=8% Similarity=0.010 Sum_probs=41.2
Q ss_pred eeeEEEEEccCCchhHHHHHHHHHHHHhhCCCcEEEeeeecccCeeeeeCce
Q 029665 23 KVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 74 (190)
Q Consensus 23 ~I~KIvln~gvges~~~L~~a~~~L~~ITGQkP~~tkAKksia~FkiRkG~p 74 (190)
.+..++|-+..+-+.+.+......|+..+|.+..+...-..|.++.|+-|+-
T Consensus 102 ~~~~~~V~SA~~Ls~~q~~~i~~~l~~~~g~~v~l~~~vD~IGG~ii~igd~ 153 (176)
T PRK08474 102 NEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLKQKKSDYDGIKVEVDDL 153 (176)
T ss_pred CeEEEEEEECccCCHHHHHHHHHHHHHHhCCeEEEEEEEcCCCCEEEEECCE
Confidence 3456667666665667788888999999999888887777789999998876
No 17
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=21.17 E-value=42 Score=20.26 Aligned_cols=18 Identities=28% Similarity=0.558 Sum_probs=14.7
Q ss_pred CCCCcccChHHHHHHhHh
Q 029665 158 VGIQHRVTKEDAMKWFQV 175 (190)
Q Consensus 158 i~~~hri~~ee~~~~~~~ 175 (190)
+|...+++++|-.+|+++
T Consensus 32 ~g~~~~~~~~~l~~~~~~ 49 (49)
T TIGR01764 32 VGRHYRIPREDVDEYLEQ 49 (49)
T ss_pred eCCeEEEeHHHHHHHHhC
Confidence 466678999999999875
No 18
>PF05953 Allatostatin: Allatostatin; InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=20.91 E-value=35 Score=16.35 Aligned_cols=7 Identities=29% Similarity=0.923 Sum_probs=4.9
Q ss_pred eeEEecc
Q 029665 110 GCFGFGI 116 (190)
Q Consensus 110 GN~sfGi 116 (190)
..|+|||
T Consensus 4 ~~Y~FGL 10 (11)
T PF05953_consen 4 PMYSFGL 10 (11)
T ss_pred CccccCc
Confidence 4578886
No 19
>TIGR01589 A_thal_3526 uncharacterized plant-specific domain TIGR01589. This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa.
Probab=20.25 E-value=62 Score=22.48 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=15.0
Q ss_pred cChHHHHHHhHhhccEE
Q 029665 164 VTKEDAMKWFQVKYEGV 180 (190)
Q Consensus 164 i~~ee~~~~~~~~~~~~ 180 (190)
.|+||.|++|.++.|++
T Consensus 16 Msk~E~v~~L~~~a~I~ 32 (57)
T TIGR01589 16 MSKEETVSFLFENAGIS 32 (57)
T ss_pred CCHHHHHHHHHHHcCCC
Confidence 58999999999998874
Done!